Psyllid ID: psy7994

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Protein Sequence
VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
EEccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHEEEEcccccHHHHHHHHHHHHHHHccEEEEEEcccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHEEEEEEEEEEcccHHHHcccccHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHccEEEEEEcccEccccccccccccHHcccc
Coil and Loop (DISEMBL)
vtgankgiGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAfkvnssepfgsqaLHTMRTNYFALIDVCDILFPLLRshgrvvnvssscghlchVTSEALKKKLLHEIKSVEELSALMNEFVELaqdgshtkggwpnsayAATKLGVTKLSFLQHALLSQDAIREDLVVNcvhpgyvntdmssgkgpltidqdni
Flexible Loop (DISEMBL)
VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGyvntdmssgkgpltidqdni
Low Complexity Region (SEG)
VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI
Disordered region (IsUnstruct)
******GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN*****************
Disordered Region (DISOPRED)
VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHG*********************KKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI
Disordered Region (DISEMBL)
VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI
Disordered Region (DISPRO)
VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD***************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	230	2.2.26 [Sep-21-2011]
Q28960	289	Carbonyl reductase [NADPH	yes	N/A	0.965	0.768	0.465	3e-51
P48758	277	Carbonyl reductase [NADPH	yes	N/A	0.952	0.790	0.484	3e-51
P16152	277	Carbonyl reductase [NADPH	yes	N/A	0.952	0.790	0.489	4e-51
Q5RCU5	277	Carbonyl reductase [NADPH	yes	N/A	0.952	0.790	0.489	5e-51
Q8MI29	277	Carbonyl reductase [NADPH	N/A	N/A	0.965	0.801	0.468	1e-49
P47844	277	Carbonyl reductase [NADPH	no	N/A	0.939	0.779	0.460	3e-48
P47727	277	Carbonyl reductase [NADPH	yes	N/A	0.956	0.794	0.482	4e-48
Q3SZD7	277	Carbonyl reductase [NADPH	no	N/A	0.956	0.794	0.456	6e-48
Q8K354	277	Carbonyl reductase [NADPH	no	N/A	0.986	0.819	0.417	8e-48
O75828	277	Carbonyl reductase [NADPH	no	N/A	0.986	0.819	0.426	3e-47

>sp|Q28960|CBR1_PIG Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3

 Score =  201 bits (512), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 108/232 (46%), Positives = 148/232 (63%), Gaps = 10/232 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGANKGIG+ IV+ L +QF G + LTARD +RGQ A+++LQ         +LDI+D  S
Sbjct: 10  VTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIIDLQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNAAIAF++++  PF  QA  TM+TN+    +VC  L PL+
Sbjct: 70  IRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCTELLPLI 129

Query: 112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +  GRVVNVSS+ G    +  S  L++K   E  + EEL  LMN+FVE  ++G H K GW
Sbjct: 130 KPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNGVHRKEGW 189

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
            +S Y  TK+GV+ LS +    L +    + +++N   PG+V TDM   K P
Sbjct: 190 SDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMGGPKAP 241

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.
Sus scrofa (taxid: 9823)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 8EC: 9

>sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3

 Score =  201 bits (511), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/231 (48%), Positives = 145/231 (62%), Gaps = 12/231 (5%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGANKGIG+ I + L ++F G + L ARD  RGQ A++KLQ         +LDI +  S
Sbjct: 10  VTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPRFHQLDIDNPQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNA IAFKVN   PF  QA  TM+TN+F   DVC  L PL+
Sbjct: 70  IRALRDFLLKEYGGLDVLVNNAGIAFKVNDDTPFHIQAEVTMKTNFFGTRDVCKELLPLI 129

Query: 112 RSHGRVVNVSS--SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           +  GRVVNVSS  S   L +   E L++K   E  + EEL  LMN+FVE  + G H + G
Sbjct: 130 KPQGRVVNVSSMVSLRALKNCRLE-LQQKFRSETITEEELVGLMNKFVEDTKKGVHAEEG 188

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
           WPNSAY  TK+GVT LS +    L++    + +++N   PG+V TDM+  K
Sbjct: 189 WPNSAYGVTKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMAGPK 239

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3

 Score =  201 bits (511), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/231 (48%), Positives = 144/231 (62%), Gaps = 12/231 (5%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG NKGIG  IV+ L + F G + LTARD +RGQ A+++LQ         +LDI D  S
Sbjct: 10  VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L PL+
Sbjct: 70  IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 129

Query: 112 RSHGRVVNVSS--SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           +  GRVVNVSS  S   L   + E L++K   E  + EEL  LMN+FVE  + G H K G
Sbjct: 130 KPQGRVVNVSSIMSVRALKSCSPE-LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEG 188

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
           WP+SAY  TK+GVT LS +    LS+    + +++N   PG+V TDM+  K
Sbjct: 189 WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 239

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3

 Score =  201 bits (510), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/231 (48%), Positives = 144/231 (62%), Gaps = 12/231 (5%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG NKGIG  IV+ L + F G + LTARD +RGQ A+++LQ         +LDI D  S
Sbjct: 10  VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDLQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L PL+
Sbjct: 70  IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 129

Query: 112 RSHGRVVNVSS--SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           +  GRVVNVSS  S   L   + E L++K   E  + EEL  LMN+FVE  + G H K G
Sbjct: 130 KPQGRVVNVSSIMSVRALKSCSPE-LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEG 188

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
           WP+SAY  TK+GVT LS +    LS+    + +++N   PG+V TDM+  K
Sbjct: 189 WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDRILLNACCPGWVRTDMAGPK 239

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1

 Score =  196 bits (497), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/235 (46%), Positives = 142/235 (60%), Gaps = 13/235 (5%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG+NKGIG  IV+ L + F G + LTARD +RGQ A+++LQ         +LDI D  S
Sbjct: 10  VTGSNKGIGLAIVRDLCRLFSGEVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDLQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+ L D L  E+GG+DVLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L PL+
Sbjct: 70  IRTLRDFLLKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 129

Query: 112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +  GRVVN+SS          S  L++K   E  + EEL  LMN+F E  + G H K GW
Sbjct: 130 KPQGRVVNISSMMSLRALKSCSPELQQKFRSETITEEELVGLMNKFAEDTKKGVHQKEGW 189

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM---SSGKGP 222
           P+SAY  TK+GVT LS +    LS+    + +++N   PG+V TDM   S+ K P
Sbjct: 190 PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPSATKSP 244

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P47844|CBR1_RABIT Carbonyl reductase [NADPH] 1 OS=Oryctolagus cuniculus GN=CBR1 PE=2 SV=2

 Score =  191 bits (486), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/226 (46%), Positives = 140/226 (61%), Gaps = 10/226 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGANKG+G+ I + L + F G + LTA+D ++GQ A+++LQ         +LDI D  S
Sbjct: 10  VTGANKGVGFAITRALCRLFSGDVLLTAQDEAQGQAAVQQLQAEGLSPRFHQLDITDLQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L   +GG++VLVNNA IAFK+  + PF  QA  TM+TN+    DVC  L PL+
Sbjct: 70  IRALRDFLRRAYGGLNVLVNNAVIAFKMEDTTPFHIQAEVTMKTNFDGTRDVCTELLPLM 129

Query: 112 RSHGRVVNVSS-SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           R  GRVVNVSS +C       S  L++K   E  + EEL  LM +FVE  + G H   GW
Sbjct: 130 RPGGRVVNVSSMTCLRALKSCSPELQQKFRSETITEEELVGLMKKFVEDTKKGVHQTEGW 189

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           P++AY  TK+GVT LS +Q   LS+    + ++VN   PG+V TDM
Sbjct: 190 PDTAYGVTKMGVTVLSRIQARHLSEHRGGDKILVNACCPGWVRTDM 235

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Oryctolagus cuniculus (taxid: 9986)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P47727|CBR1_RAT Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2

 Score =  191 bits (485), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/230 (48%), Positives = 147/230 (63%), Gaps = 10/230 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGANKGIG+ IV+ L ++F G + LTARD SRG EA+++LQ         +LDI +  S
Sbjct: 10  VTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGLSPRFHQLDIDNPQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG++VLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L P++
Sbjct: 70  IRALRDFLLQEYGGLNVLVNNAGIAFKVVDPTPFHIQAEVTMKTNFFGTQDVCKELLPII 129

Query: 112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +  GRVVNVSSS         S  L++K   E  + EEL  LMN+F+E A+ G H K GW
Sbjct: 130 KPQGRVVNVSSSVSLRALKSCSPELQQKFRSETITEEELVGLMNKFIEDAKKGVHAKEGW 189

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
           PNSAY  TK+GVT LS +    L+++   + +++N   PG+V TDM+  K
Sbjct: 190 PNSAYGVTKIGVTVLSRIYARKLNEERREDKILLNACCPGWVRTDMAGPK 239

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q3SZD7|CBR1_BOVIN Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1

 Score =  190 bits (483), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/230 (45%), Positives = 142/230 (61%), Gaps = 10/230 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGANKGIG+ IV+ L ++F G + LTARD +RG+ A+++LQ         +LDI D+ S
Sbjct: 10  VTGANKGIGFVIVRDLCRRFSGDVVLTARDEARGRAAVQQLQAEGLSPLFHQLDIDDRQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNA IAFK   + PF  QA  TM+TN+F   DVC  L PL+
Sbjct: 70  IRALRDFLRKEYGGLDVLVNNAGIAFKTADTTPFHIQAEVTMKTNFFGTRDVCTELLPLI 129

Query: 112 RSHGR-VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +  GR V   S    +     S  L++K   E  + EEL  LMN+FVE  ++G H K GW
Sbjct: 130 KPQGRVVNVSSFVSVNSLKKCSRELQQKFRSETITEEELVGLMNKFVEDTKNGVHRKEGW 189

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
           P++AY  TK+GVT LS +    LS+    + +++N   PG+V TDM   K
Sbjct: 190 PDTAYGVTKIGVTVLSRIHARKLSEQRGGDKILLNACCPGWVRTDMGGPK 239

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q8K354|CBR3_MOUSE Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=2 SV=1

 Score =  190 bits (482), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 99/237 (41%), Positives = 149/237 (62%), Gaps = 10/237 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGANKGIG+ I + L ++F G + LTARD +RG+ A+++LQ         +LDI D  S
Sbjct: 10  VTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVQQLQAEGLSPRFHQLDIDDPQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG++VLVNNA IAF+++   PF  QA  T++TN+FA  +VC  L P++
Sbjct: 70  IRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFDIQAEVTLKTNFFATRNVCTELLPIM 129

Query: 112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           + HGRVVN+SS  G        E L++K   +  +  +L  LM +FVE  ++  H + GW
Sbjct: 130 KPHGRVVNISSLQGLKALENCREDLQEKFRCDTLTEVDLVDLMKKFVEDTKNEVHEREGW 189

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           P+SAY  +KLGVT L+ +    L +    + +++N   PG+V TDM+  +G  T+++
Sbjct: 190 PDSAYGVSKLGVTVLTRILARQLDEKRKADRILLNACCPGWVKTDMARDQGSRTVEE 246

Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|O75828|CBR3_HUMAN Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3

 Score =  188 bits (478), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 145/237 (61%), Gaps = 10/237 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGAN+GIG  I + L +QF G + LTARD +RGQ A+++LQ         +LDI D  S
Sbjct: 10  VTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDLQS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG++VLVNNAA+AFK +   PF  +A  T++TN+FA  ++C+ L P++
Sbjct: 70  IRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFATRNMCNELLPIM 129

Query: 112 RSHGRVVNVSS-SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           + HGRVVN+SS  C       SE L+++   E  +  +L  LM +FVE  ++  H + GW
Sbjct: 130 KPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTKNEVHEREGW 189

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           PNS Y  +KLGVT LS +    L +    + ++VN   PG V TDM       T+++
Sbjct: 190 PNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGKDSIRTVEE 246

Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro).

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
346471833	277	hypothetical protein [Amblyomma maculatu	0.982	0.815	0.555	1e-65
321468273	290	hypothetical protein DAPPUDRAFT_231053 [	0.982	0.779	0.526	2e-65
383863073	276	PREDICTED: carbonyl reductase [NADPH] 1-	0.982	0.818	0.521	2e-65
340719469	276	PREDICTED: carbonyl reductase [NADPH] 1-	0.982	0.818	0.525	2e-65
350410469	276	PREDICTED: carbonyl reductase [NADPH] 1-	0.982	0.818	0.512	1e-64
322800101	267	hypothetical protein SINV_12418 [Solenop	0.982	0.846	0.516	2e-64
307200580	274	Carbonyl reductase [NADPH] 1 [Harpegnath	0.995	0.835	0.531	2e-64
427785103	276	Putative 20-hydroxysteroid dehydrogenase	0.982	0.818	0.529	2e-63
307181669	267	Carbonyl reductase [NADPH] 1 [Camponotus	0.982	0.846	0.512	3e-63
380029301	271	PREDICTED: carbonyl reductase [NADPH] 1-	0.982	0.833	0.516	3e-63

>gi|346471833|gb|AEO35761.1| hypothetical protein [Amblyomma maculatum]

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 131/236 (55%), Positives = 165/236 (69%), Gaps = 10/236 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG NKGIG  IVK L QQFDG ++LTARD  RG  A+ +L K         LDI D  S
Sbjct: 9   VTGGNKGIGLSIVKFLCQQFDGDVFLTARDEKRGNAAVSELNKQLLRPKFHQLDIDDLES 68

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+   D L++ +GG+DVLVNNA IA+K +S+ PFG QA  T++TN+F+ ++VC  LFPLL
Sbjct: 69  IRKFRDFLKSTYGGLDVLVNNAGIAYKQDSTAPFGEQAEVTVKTNFFSTLNVCKELFPLL 128

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R H RVVNVSS CG L  +  E LKKKL +   ++EEL +LM EFV+ A++G + + GW 
Sbjct: 129 RPHARVVNVSSMCGMLQRIPGEELKKKLSNPNITLEELCSLMEEFVQAAKEGKNKEKGWG 188

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
            SAY  +K+GVT LSF+Q    ++D  REDLVVN VHPGYV+TDMSS KGPLT DQ
Sbjct: 189 QSAYNVSKVGVTVLSFIQQREFNEDP-REDLVVNAVHPGYVDTDMSSHKGPLTPDQ 243

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321468273|gb|EFX79259.1| hypothetical protein DAPPUDRAFT_231053 [Daphnia pulex]

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/241 (52%), Positives = 173/241 (71%), Gaps = 15/241 (6%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG+NKGIG+ IVK L  +FDG +++T+RD  RG+ A+E+L+KL         DI D++S
Sbjct: 10  VTGSNKGIGFAIVKELCAKFDGDVFVTSRDEGRGKAAVEELKKLGFQPNFHQLDIDDESS 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           +    D+L++E+GG+DVLVNNAAIAFK ++ EPF  QA  TMRTN+F  +  C+I+FPLL
Sbjct: 70  VLKFKDYLKSEYGGLDVLVNNAAIAFKNDAPEPFSEQATLTMRTNFFNTLRFCNIIFPLL 129

Query: 112 RSHGRVVNVSSSCGHLCHV-----TSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
           + H RVVNVSSS GHL  +      S AL+KKL     +VEEL  ++ +FV+ AQ G+H 
Sbjct: 130 KPHARVVNVSSSVGHLRKIPGDDDVSVALRKKLSSSDLTVEELVKMIEDFVKAAQTGNHQ 189

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTID 226
           K GWPNSAY+ +K+G++ L+ +Q      D+ RED+VVN VHPGYV+TDM+S KGPLTI+
Sbjct: 190 KLGWPNSAYSTSKIGISALTRIQQKAFDHDS-REDIVVNSVHPGYVDTDMTSHKGPLTIE 248

Query: 227 Q 227
           Q
Sbjct: 249 Q 249

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863073|ref|XP_003707007.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Megachile rotundata]

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 123/236 (52%), Positives = 168/236 (71%), Gaps = 10/236 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG NKGIG+ IVK L +QFDG++YLTARD +RGQ A+++L+         +LD+ D+NS
Sbjct: 7   VTGGNKGIGFAIVKALCKQFDGVVYLTARDVNRGQNAVKQLEDQGLTPKFHQLDVTDENS 66

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I    D+L+  +GG+D+LVNNAAIAFK+ ++EPF  QA  T+R NYFAL  VC +L+PLL
Sbjct: 67  ISTFRDYLQKTYGGLDILVNNAAIAFKMAATEPFSVQAEETVRVNYFALRKVCTLLYPLL 126

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           + H RVV+VSSS G L  + SE+L+K+      + EEL  +M+EFV  A+  +H + GW 
Sbjct: 127 KPHARVVHVSSSSGRLSLIPSESLRKRFSDPNLTEEELDNIMHEFVNTAKTNTHLENGWS 186

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           NSAY A+K+GV+ L+ +   + + D+ REDL VN VHPGYV+TDM+S KG LT DQ
Sbjct: 187 NSAYVASKVGVSALARVHQKMFNSDS-REDLAVNAVHPGYVDTDMTSHKGTLTPDQ 241

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|340719469|ref|XP_003398176.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Bombus terrestris]

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/236 (52%), Positives = 166/236 (70%), Gaps = 10/236 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG NKGIG+ IVK L +QFDG++YLTARD +RGQ A+++L+K         LDI D++S
Sbjct: 7   VTGGNKGIGFAIVKHLCKQFDGVVYLTARDVTRGQNAIKELEKQGLKPKFHQLDITDESS 66

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I   HD+LE  + G+DVLVNNAAIAFK  ++EPF  QA  T+R NYF+L  VC  L+PLL
Sbjct: 67  ISTFHDYLEKTYQGLDVLVNNAAIAFKTTATEPFSLQAEETLRVNYFSLRKVCSKLYPLL 126

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           ++H RVV+VSSS GHL  +  E LKK+      + EEL  +M+EF++ A+  +H + GW 
Sbjct: 127 KTHARVVHVSSSAGHLSKIPGETLKKRFSDPNLTEEELDNIMHEFIDAAKTNTHLQKGWA 186

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           NSAY A+K+GV+ L+ +   + + D  REDLVVN VHPGYV+TDM+S KG L  D+
Sbjct: 187 NSAYVASKVGVSALARIHQRMFNSDT-REDLVVNAVHPGYVDTDMTSHKGTLKPDE 241

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|350410469|ref|XP_003489050.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Bombus impatiens]

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 121/236 (51%), Positives = 167/236 (70%), Gaps = 10/236 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG NKGIG+ IVK L +QFDG++YLTARD +RGQ A+++L+K         LD+ D++S
Sbjct: 7   VTGGNKGIGFAIVKHLCKQFDGVVYLTARDVTRGQNAIKELEKQGLNPKFHQLDVTDESS 66

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I   HD+L+  + G+D+LVNNAAIAFK  ++EPF  QA  T+R NYF+L  VC  L+PLL
Sbjct: 67  ISTFHDYLKKTYQGLDILVNNAAIAFKTTATEPFSLQAEETLRVNYFSLRKVCSKLYPLL 126

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           ++H RVV+VSSS GHL  +  E+LKK+      + EEL  +M+EF++ A+  +H + GW 
Sbjct: 127 KTHARVVHVSSSSGHLSKIPGESLKKRFSDPNLTEEELDNIMHEFIDAAKTNTHLEKGWA 186

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           NSAY A+K+GV+ L+ +   + + D  REDLVVN VHPGYV+TDM+S KG L  D+
Sbjct: 187 NSAYVASKVGVSALARIHQRMFNSDT-REDLVVNAVHPGYVDTDMTSHKGTLKPDE 241

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|322800101|gb|EFZ21207.1| hypothetical protein SINV_12418 [Solenopsis invicta]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 122/236 (51%), Positives = 167/236 (70%), Gaps = 10/236 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG NKGIG+ IVK L Q++DG +YLTARD +RG  A+++L+K         LD+ D +S
Sbjct: 1   VTGGNKGIGFAIVKALCQKYDGNVYLTARDTNRGTNAVDELKKQGLNPKFHQLDVTDDDS 60

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           +    D+L+  +GG+DVLVNNAAIAFK+N++E FG QA  T+R NYF+L  VC  L+PLL
Sbjct: 61  VNTFRDYLQNTYGGLDVLVNNAAIAFKMNATESFGDQAEETIRVNYFSLRRVCTALYPLL 120

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R H RVV+VSSS G L ++T EALK+K+     +  EL  +M++FV  A+ G+H + GW 
Sbjct: 121 RPHARVVHVSSSAGRLSNITGEALKQKIADPNLTETELDKIMHDFVNAAKSGTHIEAGWS 180

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           NS Y A+K+GVT L+ +  ++ + D+ RED+ VN VHPGYV+TDM+S KG LT DQ
Sbjct: 181 NSTYVASKIGVTALACIHQSMFNADS-REDIAVNAVHPGYVDTDMTSHKGTLTPDQ 235

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200580|gb|EFN80721.1| Carbonyl reductase [NADPH] 1 [Harpegnathos saltator]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 127/239 (53%), Positives = 168/239 (70%), Gaps = 10/239 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG NKGIG+ IVK L QQFDGI+YLTARD++RG  A+ +L+K         LDI D  S
Sbjct: 8   VTGGNKGIGFAIVKALCQQFDGIVYLTARDSNRGLTAVGELKKQGLKSEFHQLDINDDAS 67

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           +   HD+L+ ++GG+DVLVNNAAIAFK +++EPF  QA  T++ NYF+L  VC  L+PLL
Sbjct: 68  VAEFHDYLKDKYGGLDVLVNNAAIAFKTDATEPFAIQAEETIKVNYFSLRRVCTALYPLL 127

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R H RVV+VSSS G L ++T +ALKKK+     S EEL  +M  FV  A+ G+H + GW 
Sbjct: 128 RPHARVVHVSSSAGRLSNITGDALKKKIADPNLSEEELDNIMRGFVNAAKSGTHLQAGWS 187

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI 230
           NSAY A+K+GV+ L+ +  A+ + D  RED+ VN VHPGYV+TDM+S KG L I++  I
Sbjct: 188 NSAYVASKIGVSALTGIHQAMFNADP-REDIAVNAVHPGYVDTDMTSHKGHLKIEEGAI 245

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|427785103|gb|JAA58003.1| Putative 20-hydroxysteroid dehydrogenase [Rhipicephalus pulchellus]

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 125/236 (52%), Positives = 167/236 (70%), Gaps = 10/236 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG NKGIG+ IVK L QQF+G ++LTARD +RG+ A+ +L K         LDI D  S
Sbjct: 8   VTGGNKGIGFCIVKFLCQQFEGDVFLTARDEARGKAAVAELNKQLLHPKFHQLDIDDLES 67

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           IK L D L++ +GG+DVLVNNA IA+KV+S+ PF  QA  T++TN+F  ++VC  LFPLL
Sbjct: 68  IKRLRDFLKSTYGGLDVLVNNAGIAYKVSSTAPFSEQAEVTVKTNFFGTLNVCKELFPLL 127

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R H RVVN+SS CG L  +  + ++K+L +   +++EL +LM EFV+ A+DG + + GW 
Sbjct: 128 RPHARVVNLSSVCGMLKRIPGKEVRKRLCNPDITLDELCSLMEEFVQAAKDGKNDEKGWG 187

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           +SAY  +K+G+T LSF+Q      D  REDLVVN VHPGYV+TDM+S KGPLT DQ
Sbjct: 188 HSAYNVSKVGITVLSFIQQREFDNDP-REDLVVNAVHPGYVDTDMTSHKGPLTPDQ 242

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307181669|gb|EFN69172.1| Carbonyl reductase [NADPH] 1 [Camponotus floridanus]

 Score =  247 bits (631), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 121/236 (51%), Positives = 166/236 (70%), Gaps = 10/236 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTGANKGIGY IV+ L QQ+DG +YLTARD +RG  A+ +L+K         LDI D  S
Sbjct: 1   VTGANKGIGYAIVRSLCQQYDGNVYLTARDVTRGLNAVSELEKQGLKPKFHQLDISDDES 60

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           +    D+L+  +GG+DVL+NNAAIAF V+ + PFG+QA  T+R NYF+L  VC  L+PLL
Sbjct: 61  VTKFRDYLKNTYGGLDVLINNAAIAFNVDDTTPFGTQAEETIRINYFSLRKVCTALYPLL 120

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R H RVV+V SS G LC++T  ALKK+L     +  EL  +M+EFV+ A+  +H + GW 
Sbjct: 121 RPHARVVHVFSSAGRLCNITGGALKKRLSDPNLTEAELDKIMHEFVKAAKSDAHIQAGWS 180

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           NSAY A+K+GV+ L+ +  ++ + D+ R+D+ VN VHPGYV+TDM++ KGPLT D+
Sbjct: 181 NSAYVASKIGVSALAGIHQSMFNVDS-RKDIAVNAVHPGYVDTDMTNHKGPLTPDE 235

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|380029301|ref|XP_003698315.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Apis florea]

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 122/236 (51%), Positives = 166/236 (70%), Gaps = 10/236 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG NKGIG+ IVK L +QFDG++YLTARD +RG  A+++L+K         LDI D NS
Sbjct: 7   VTGGNKGIGFAIVKQLCKQFDGVVYLTARDVNRGLNAIKQLEKQGLKPKFHQLDITDDNS 66

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I   +++LE  + G+DVLVNNAAIAFK+++ EPF  QA  T++TNYF L  VC  L+PLL
Sbjct: 67  ISTFYNYLEQTYKGLDVLVNNAAIAFKMDAKEPFSIQAAETLKTNYFGLRKVCSKLYPLL 126

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           + H RVV+VSSS GHL  + SE L+ + L+   + EEL  +M+EFVE A+  +H + GW 
Sbjct: 127 KPHARVVHVSSSSGHLSLIPSETLRNRFLNPNLTEEELDNIMHEFVEAAKTNTHLEKGWA 186

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           NSAY  +K+GV+ L+ +   + + D+ R+ LVVN VHPGYV+TDM+S +G LT DQ
Sbjct: 187 NSAYVVSKVGVSALARVHQRIFNSDS-RQGLVVNAVHPGYVDTDMTSHRGTLTPDQ 241

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
RGD|2286	277	Cbr1 "carbonyl reductase 1" [R	0.956	0.794	0.482	8.8e-47
UNIPROTKB|F1N8Y3	276	CBR1 "Uncharacterized protein"	0.965	0.804	0.461	1.8e-46
UNIPROTKB|F1P2X1	277	CBR1 "Uncharacterized protein"	0.965	0.801	0.461	1.8e-46
UNIPROTKB|Q3SZD7	277	CBR1 "Carbonyl reductase [NADP	0.952	0.790	0.480	3e-46
UNIPROTKB|J9P7P2	277	CBR1 "Uncharacterized protein"	0.965	0.801	0.469	3.8e-46
UNIPROTKB|F1SGX4	277	CBR3 "Uncharacterized protein"	0.986	0.819	0.447	6.2e-46
UNIPROTKB|Q28960	289	CBR1 "Carbonyl reductase [NADP	0.965	0.768	0.465	6.2e-46
MGI|MGI:88284	277	Cbr1 "carbonyl reductase 1" [M	0.952	0.790	0.484	6.2e-46
UNIPROTKB|P16152	277	CBR1 "Carbonyl reductase [NADP	0.956	0.794	0.482	7.9e-46
UNIPROTKB|Q5RCU5	277	CBR1 "Carbonyl reductase [NADP	0.956	0.794	0.482	1e-45

RGD|2286 Cbr1 "carbonyl reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 111/230 (48%), Positives = 147/230 (63%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
             VTGANKGIG+ IV+ L ++F G + LTARD SRG EA+++LQ         +LDI +  S
Sbjct:    10 VTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGLSPRFHQLDIDNPQS 69

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             I+AL D L  E+GG++VLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L P++
Sbjct:    70 IRALRDFLLQEYGGLNVLVNNAGIAFKVVDPTPFHIQAEVTMKTNFFGTQDVCKELLPII 129

Query:   112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
             +  GRVVNVSSS         S  L++K   E  + EEL  LMN+F+E A+ G H K GW
Sbjct:   130 KPQGRVVNVSSSVSLRALKSCSPELQQKFRSETITEEELVGLMNKFIEDAKKGVHAKEGW 189

Query:   171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
             PNSAY  TK+GVT LS +    L+++   + +++N   PG+V TDM+  K
Sbjct:   190 PNSAYGVTKIGVTVLSRIYARKLNEERREDKILLNACCPGWVRTDMAGPK 239

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001542 "ovulation from ovarian follicle" evidence=IEP

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005902 "microvillus" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0017144 "drug metabolic process" evidence=ISO;ISS

GO:0018205 "peptidyl-lysine modification" evidence=NAS

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0033574 "response to testosterone stimulus" evidence=IEP

GO:0034698 "response to gonadotropin stimulus" evidence=IEP

GO:0042373 "vitamin K metabolic process" evidence=ISO;ISS

GO:0042376 "phylloquinone catabolic process" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|F1N8Y3 CBR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 107/232 (46%), Positives = 148/232 (63%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
             VTG+NKGIG  IV+ L +QF G +YLTARD +RGQEA+ KLQ+         LDI D  S
Sbjct:     9 VTGSNKGIGLAIVRDLCKQFKGDVYLTARDPARGQEAVAKLQEEGLHPLFHQLDIDDLQS 68

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             IK L D L+ ++GG++VLVNNA IAFKV+   PF  QA  T++TN+F   ++C  L PL+
Sbjct:    69 IKVLRDFLKEKYGGLNVLVNNAGIAFKVSDRTPFAVQAEVTLKTNFFGTRNICTELLPLI 128

Query:   112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
             + +GRVVNVSS          S+ L+KK   +  + +EL  LM +FVE  +   H K GW
Sbjct:   129 KPYGRVVNVSSMVSISALGGCSQELQKKFRSDTITEDELVELMTKFVEDTKKSVHEKEGW 188

Query:   171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
             PN+AY  +K+GVT LS +Q  +L++    + +++N   PG+V TDM+  K P
Sbjct:   189 PNTAYGVSKIGVTVLSRIQARMLNEKRKGDHILLNACCPGWVRTDMAGPKAP 240

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1P2X1 CBR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 107/232 (46%), Positives = 148/232 (63%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
             VTG+NKGIG  IV+ L +QF G +YLTARD +RGQEA+ KLQ+         LDI D  S
Sbjct:    10 VTGSNKGIGLAIVRDLCKQFKGDVYLTARDPARGQEAVAKLQEEGLHPLFHQLDIDDLQS 69

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             IK L D L+ ++GG++VLVNNA IAFKV+   PF  QA  T++TN+F   ++C  L PL+
Sbjct:    70 IKVLRDFLKEKYGGLNVLVNNAGIAFKVSDRTPFAVQAEVTLKTNFFGTRNICTELLPLI 129

Query:   112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
             + +GRVVNVSS          S+ L+KK   +  + +EL  LM +FVE  +   H K GW
Sbjct:   130 KPYGRVVNVSSMVSISALGGCSQELQKKFRSDTITEDELVELMTKFVEDTKKSVHEKEGW 189

Query:   171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
             PN+AY  +K+GVT LS +Q  +L++    + +++N   PG+V TDM+  K P
Sbjct:   190 PNTAYGVSKIGVTVLSRIQARMLNEKRKGDHILLNACCPGWVRTDMAGPKAP 241

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q3SZD7 CBR1 "Carbonyl reductase [NADPH] 1" [Bos taurus (taxid:9913)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 111/231 (48%), Positives = 148/231 (64%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
             VTGANKGIG+ IV+ L ++F G + LTARD +RG+ A+++LQ         +LDI D+ S
Sbjct:    10 VTGANKGIGFVIVRDLCRRFSGDVVLTARDEARGRAAVQQLQAEGLSPLFHQLDIDDRQS 69

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             I+AL D L  E+GG+DVLVNNA IAFK   + PF  QA  TM+TN+F   DVC  L PL+
Sbjct:    70 IRALRDFLRKEYGGLDVLVNNAGIAFKTADTTPFHIQAEVTMKTNFFGTRDVCTELLPLI 129

Query:   112 RSHGRVVNVSS--SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
             +  GRVVNVSS  S   L   + E L++K   E  + EEL  LMN+FVE  ++G H K G
Sbjct:   130 KPQGRVVNVSSFVSVNSLKKCSRE-LQQKFRSETITEEELVGLMNKFVEDTKNGVHRKEG 188

Query:   170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
             WP++AY  TK+GVT LS +    LS+    + +++N   PG+V TDM   K
Sbjct:   189 WPDTAYGVTKIGVTVLSRIHARKLSEQRGGDKILLNACCPGWVRTDMGGPK 239

GO:0042373 "vitamin K metabolic process" evidence=ISS

GO:0017144 "drug metabolic process" evidence=ISS

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J9P7P2 CBR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 109/232 (46%), Positives = 142/232 (61%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
             VTGANKGIG+ I + L +QF G + LTARD +RG+ A+++LQ          LDI D  S
Sbjct:    10 VTGANKGIGFAIARELCRQFSGDVVLTARDEARGRAAVQQLQAEGLSPRFHLLDIDDLQS 69

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             I+AL D L  E+GG+DVLVNNA IAFK N   PF  QA  TM+TN+F   DVC  L PL+
Sbjct:    70 IRALRDFLRKEYGGLDVLVNNAGIAFKTNDPTPFHIQAEVTMKTNFFGTRDVCTELLPLM 129

Query:   112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
             +  GRVVNVSS          S  L++K   E  + EEL  LMN+FVE  + G H   GW
Sbjct:   130 KPQGRVVNVSSVVSVRALKSCSPELQQKFRSEAITEEELVGLMNKFVEDTKKGVHRNEGW 189

Query:   171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
             P++AY  TK+GVT LS +    LS+    + +++N   PG+V TDM+  + P
Sbjct:   190 PDNAYGVTKIGVTVLSRIHARKLSEQRRDDKILLNACCPGWVRTDMAGPRAP 241

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1SGX4 CBR3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 106/237 (44%), Positives = 153/237 (64%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
             VTGANKGIG+ I + L +QF G + LT+RDA+RG+ A+++LQ         +LDI D  S
Sbjct:    10 VTGANKGIGFAIARDLCRQFSGDVVLTSRDAARGRAAVQQLQAEGLSPRFHQLDIDDLQS 69

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             I+AL D L  E+GG++VLVNNA IAFK++   PF  QA  T++TN+F   +VC  L P++
Sbjct:    70 IRALRDFLRKEYGGLNVLVNNAGIAFKIDDPTPFDIQAEMTLKTNFFGTRNVCIELLPII 129

Query:   112 RSHGRVVNVSSSCGHLC-HVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
             + HGRVVN+SS  G       SE L++K   E  + E+L  LM +FVE A++  H + GW
Sbjct:   130 KPHGRVVNISSLLGSKALENCSEDLQEKFRCEALTEEDLVDLMKKFVEDAKNEVHEREGW 189

Query:   171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
             P+SAY  +KLGVT LS +    L +    + +++N   PG+V TDM+ G+G  T+++
Sbjct:   190 PSSAYGVSKLGVTVLSRILAQRLDEKRKADRILLNACCPGWVKTDMTGGQGFETVEE 246

GO:0070402 "NADPH binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IEA

UNIPROTKB|Q28960 CBR1 "Carbonyl reductase [NADPH] 1" [Sus scrofa (taxid:9823)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 108/232 (46%), Positives = 148/232 (63%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
             VTGANKGIG+ IV+ L +QF G + LTARD +RGQ A+++LQ         +LDI+D  S
Sbjct:    10 VTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIIDLQS 69

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             I+AL D L  E+GG+DVLVNNAAIAF++++  PF  QA  TM+TN+    +VC  L PL+
Sbjct:    70 IRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCTELLPLI 129

Query:   112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
             +  GRVVNVSS+ G    +  S  L++K   E  + EEL  LMN+FVE  ++G H K GW
Sbjct:   130 KPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNGVHRKEGW 189

Query:   171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
              +S Y  TK+GV+ LS +    L +    + +++N   PG+V TDM   K P
Sbjct:   190 SDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMGGPKAP 241

GO:0042373 "vitamin K metabolic process" evidence=ISS

GO:0017144 "drug metabolic process" evidence=ISS

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:88284 Cbr1 "carbonyl reductase 1" [Mus musculus (taxid:10090)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 112/231 (48%), Positives = 145/231 (62%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
             VTGANKGIG+ I + L ++F G + L ARD  RGQ A++KLQ         +LDI +  S
Sbjct:    10 VTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPRFHQLDIDNPQS 69

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             I+AL D L  E+GG+DVLVNNA IAFKVN   PF  QA  TM+TN+F   DVC  L PL+
Sbjct:    70 IRALRDFLLKEYGGLDVLVNNAGIAFKVNDDTPFHIQAEVTMKTNFFGTRDVCKELLPLI 129

Query:   112 RSHGRVVNVSS--SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
             +  GRVVNVSS  S   L +   E L++K   E  + EEL  LMN+FVE  + G H + G
Sbjct:   130 KPQGRVVNVSSMVSLRALKNCRLE-LQQKFRSETITEEELVGLMNKFVEDTKKGVHAEEG 188

Query:   170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
             WPNSAY  TK+GVT LS +    L++    + +++N   PG+V TDM+  K
Sbjct:   189 WPNSAYGVTKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMAGPK 239

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;TAS

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005902 "microvillus" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0017144 "drug metabolic process" evidence=ISO

GO:0042373 "vitamin K metabolic process" evidence=ISO

GO:0042376 "phylloquinone catabolic process" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO;TAS

UNIPROTKB|P16152 CBR1 "Carbonyl reductase [NADPH] 1" [Homo sapiens (taxid:9606)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 111/230 (48%), Positives = 141/230 (61%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
             VTG NKGIG  IV+ L + F G + LTARD +RGQ A+++LQ         +LDI D  S
Sbjct:    10 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 69

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             I+AL D L  E+GG+DVLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L PL+
Sbjct:    70 IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 129

Query:   112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
             +  GRVVNVSS          S  L++K   E  + EEL  LMN+FVE  + G H K GW
Sbjct:   130 KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGW 189

Query:   171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
             P+SAY  TK+GVT LS +    LS+    + +++N   PG+V TDM+  K
Sbjct:   190 PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 239

GO:0000166 "nucleotide binding" evidence=IEA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0042373 "vitamin K metabolic process" evidence=IDA

GO:0017144 "drug metabolic process" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

UNIPROTKB|Q5RCU5 CBR1 "Carbonyl reductase [NADPH] 1" [Pongo abelii (taxid:9601)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 111/230 (48%), Positives = 141/230 (61%)

Query:     1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
             VTG NKGIG  IV+ L + F G + LTARD +RGQ A+++LQ         +LDI D  S
Sbjct:    10 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDLQS 69

Query:    52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
             I+AL D L  E+GG+DVLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L PL+
Sbjct:    70 IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 129

Query:   112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
             +  GRVVNVSS          S  L++K   E  + EEL  LMN+FVE  + G H K GW
Sbjct:   130 KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGW 189

Query:   171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
             P+SAY  TK+GVT LS +    LS+    + +++N   PG+V TDM+  K
Sbjct:   190 PSSAYGVTKIGVTVLSRIHARKLSEQRKGDRILLNACCPGWVRTDMAGPK 239

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISS

GO:0017144 "drug metabolic process" evidence=ISS

GO:0042373 "vitamin K metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P16152	CBR1_HUMAN	1, ., 1, ., 1, ., 1, 8, 9	0.4891	0.9521	0.7906	yes	N/A
P48758	CBR1_MOUSE	1, ., 1, ., 1, ., 1, 8, 9	0.4848	0.9521	0.7906	yes	N/A
Q28960	CBR1_PIG	1, ., 1, ., 1, ., 1, 8, 9	0.4655	0.9652	0.7681	yes	N/A
P47727	CBR1_RAT	1, ., 1, ., 1, ., 1, 8, 9	0.4826	0.9565	0.7942	yes	N/A
Q5RCU5	CBR1_PONAB	1, ., 1, ., 1, ., 1, 8, 9	0.4891	0.9521	0.7906	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.921

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	230
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	6e-65
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-27
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-26
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-24
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-20
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-19
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-18
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	6e-18
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-17
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-17
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-16
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	5e-16
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	5e-16
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	8e-16
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-15
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	7e-15
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-14
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	5e-14
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	5e-14
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	6e-14
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	7e-14
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	8e-14
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	8e-14
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-13
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-13
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	4e-13
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	4e-13
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	6e-13
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	7e-13
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	9e-13
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-12
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-12
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-12
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-12
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-12
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	8e-12
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	9e-12
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-11
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	3e-11
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-11
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	5e-11
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	5e-11
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	6e-11
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-11
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	8e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-10
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-10
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-10
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	4e-10
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	4e-10
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	5e-10
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	6e-10
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	7e-10
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	8e-10
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-09
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	1e-09
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-09
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-09
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-09
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-09
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-09
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-09
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	4e-09
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	5e-09
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	6e-09
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	7e-09
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	9e-09
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	9e-09
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-08
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	1e-08
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	1e-08
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-08
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	3e-08
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-08
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-08
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	6e-08
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	6e-08
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	6e-08
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	9e-08
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-07
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-07
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-07
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-07
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-07
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-07
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-07
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-07
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-07
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-07
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-07
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	3e-07
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	4e-07
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	5e-07
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	5e-07
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	5e-07
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	9e-07
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	9e-07
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-06
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-06
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-06
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-06
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-06
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-06
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	1e-06
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-06
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-06
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-06
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-06
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-06
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-06
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-06
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-06
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-06
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	4e-06
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-06
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	4e-06
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	4e-06
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	5e-06
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	6e-06
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	6e-06
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	7e-06
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	7e-06
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	7e-06
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	9e-06
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	9e-06
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	9e-06
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-05
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-05
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-05
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-05
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-05
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-05
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-05
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-05
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-05
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-05
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-05
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-05
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-05
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-05
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	3e-05
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	3e-05
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	3e-05
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	3e-05
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	5e-05
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	5e-05
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	6e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	6e-05
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	7e-05
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	8e-05
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	9e-05
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	1e-04
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	1e-04
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-04
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-04
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-04
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-04
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	3e-04
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	3e-04
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	4e-04
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-04
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	5e-04
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	6e-04
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	9e-04
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	9e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	0.001
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	0.001
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	0.001
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	0.001
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	0.002
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	0.002
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	0.003
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	0.003
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	0.004
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	0.004
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  200 bits (511), Expect = 6e-65
 Identities = 87/239 (36%), Positives = 115/239 (48%), Gaps = 60/239 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTGAN+GIG+ IV+ L +   G + LTARD  RGQ A+EKL+          LD+ D  S
Sbjct: 5   VTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTDDAS 64

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNS-SEPFGSQALHTMRTNYFALIDVCDILFPL 110
           I+A  D +E ++GG+D+LVNNA IAFK    S P   QA  TM+TN+F  +DV   L PL
Sbjct: 65  IEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQALLPL 124

Query: 111 LR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           L+    GR+VNVSS  G L                                         
Sbjct: 125 LKKSPAGRIVNVSSGLGSL----------------------------------------- 143

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
               SAY  +K  +  L+ +    L +  I+    VN   PG+V TDM  GK P T ++
Sbjct: 144 ---TSAYGVSKAALNALTRILAKELKETGIK----VNACCPGWVKTDMGGGKAPKTPEE 195

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  104 bits (261), Expect = 2e-27
 Identities = 53/226 (23%), Positives = 81/226 (35%), Gaps = 55/226 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           VTGA+ GIG  I + L ++    + L  R+     E              + D+ D+  +
Sbjct: 3   VTGASSGIGRAIARRLARE-GAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEEDV 61

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL- 111
           +AL +    E G +D+LVNNA IA      E         +  N   +  +     P + 
Sbjct: 62  EALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPHMK 121

Query: 112 -RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
            +  GR+VN+SS  G                                         +   
Sbjct: 122 KQGGGRIVNISSVAGL----------------------------------------RPLP 141

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             +AYAA+K  +  L+      L+   IR    VN V PG V+T M
Sbjct: 142 GQAAYAASKAALEGLTRSLALELAPYGIR----VNAVAPGLVDTPM 183

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  102 bits (256), Expect = 1e-26
 Identities = 56/229 (24%), Positives = 82/229 (35%), Gaps = 58/229 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----------QKLDILDK 49
           VTGA+ GIG  I + L ++   ++    R      EAL                 D+ D 
Sbjct: 10  VTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDD 69

Query: 50  N-SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDIL 107
             S++AL    E E G +D+LVNNA IA      E    +     +  N      +    
Sbjct: 70  EESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAA 129

Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
            PL++   R+VN+SS                                         +   
Sbjct: 130 LPLMKK-QRIVNISSV----------------------------------------AGLG 148

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           G    +AYAA+K  +  L+      L+   IR    VN V PGY++T M
Sbjct: 149 GPPGQAAYAASKAALIGLTKALALELAPRGIR----VNAVAPGYIDTPM 193

Length = 251

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 95.0 bits (237), Expect = 9e-24
 Identities = 55/237 (23%), Positives = 79/237 (33%), Gaps = 75/237 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
           +TG + GIG  +   L  Q    +  TAR+     + LE L           +LD+ D+ 
Sbjct: 5   ITGCSSGIGLALALALAAQGY-RVIATARNP----DKLESLGELLNDNLEVLELDVTDEE 59

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           SIKA    +    G +DVLVNNA         E    +       N F  + V     PL
Sbjct: 60  SIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPL 119

Query: 111 LRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           +R    GR+VNVSS  G +                                         
Sbjct: 120 MRKQGSGRIVNVSSVAGLVPT--------------------------------------- 140

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLS-QDAIREDL------VVNCVHPGYVNTDMSS 218
                 Y A+K           AL +  +++R +L      V   + PG V T  + 
Sbjct: 141 -PFLGPYCASK----------AALEALSESLRLELAPFGIKVT-IIEPGPVRTGFAD 185

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 85.5 bits (212), Expect = 4e-20
 Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 58/231 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA++GIG+GI  GL +    I+ + +R+  + +EA + ++K          D+ D+ +
Sbjct: 10  VTGASRGIGFGIASGLAEAGANIV-INSRNEEKAEEAQQLIEKEGVEATAFTCDVSDEEA 68

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPL 110
           IKA  + +E + G +D+LVNNA I  + + +E F        +  N   +  V   +   
Sbjct: 69  IKAAVEAIEEDFGKIDILVNNAGII-RRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVARH 127

Query: 111 L--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           +  + HG+++N+       C + SE                                  G
Sbjct: 128 MIKQGHGKIINI-------CSLLSE---------------------------------LG 147

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
           G P  AYAA+K GV  L+       ++  I+    VN + PGY  T+M+  
Sbjct: 148 GPPVPAYAASKGGVAGLTKALATEWARHGIQ----VNAIAPGYFATEMTEA 194

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 46/229 (20%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDK 49
           +TGAN GIG    + L ++   +I    R+  +G+EA  +++K           LD+   
Sbjct: 6   ITGANSGIGKETARELAKRGAHVIIAC-RNEEKGEEAAAEIKKETGNAKVEVIQLDLSSL 64

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
            S++   +   A    +D+L+NNA I          G +       NY     + ++L P
Sbjct: 65  ASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFE--LQFAVNYLGHFLLTNLLLP 122

Query: 110 LLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
           +L+  +  R+VNVSS                  H                    D  + K
Sbjct: 123 VLKASAPSRIVNVSSI----------------AH----------RAGPIDFNDLDLENNK 156

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
              P  AY  +KL     +      L    +     VN +HPG V T++
Sbjct: 157 EYSPYKAYGQSKLANILFTRELARRLEGTGV----TVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 80.3 bits (199), Expect = 2e-18
 Identities = 60/234 (25%), Positives = 87/234 (37%), Gaps = 73/234 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--KLDILDKNSIKALHDH 58
           VTGAN+GIG   V+ L+ +    +Y  ARD     +   ++   +LD+ D  S+ A    
Sbjct: 11  VTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAA--- 67

Query: 59  LEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFPLLRS 113
             AE    V +LVNNA I     +               M TNYF  + +     P+L +
Sbjct: 68  --AEAASDVTILVNNAGIF---RTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAA 122

Query: 114 --HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
              G +VNV S       V S            +   L                      
Sbjct: 123 NGGGAIVNVLS-------VLS----------WVNFPNL---------------------- 143

Query: 172 NSAYAATKLGVTKLSFLQHALLSQ-DAIREDLV-----VNCVHPGYVNTDMSSG 219
              Y+A+K           A  S   A+R +L      V  VHPG ++TDM++G
Sbjct: 144 -GTYSASK----------AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG 186

Length = 238

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 79.0 bits (195), Expect = 6e-18
 Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 63/233 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTGAN+GIG   V+ L+      +Y   RD       + K        +LD+ D  SIKA
Sbjct: 8   VTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVTDPESIKA 67

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT----MRTNYFALIDVCDILFPL 110
                +     VDV++NNA +  K  +       AL      M  N F L+ +     P+
Sbjct: 68  AAAQAK----DVDVVINNAGV-LKPAT--LLEEGALEALKQEMDVNVFGLLRLAQAFAPV 120

Query: 111 LRSHGR--VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           L+++G   +VN++S                    + S++   A+                
Sbjct: 121 LKANGGGAIVNLNS--------------------VASLKNFPAM---------------- 144

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG 221
                 Y+A+K   +    L   L ++ A +  LV++ VHPG ++T M++G G
Sbjct: 145 ----GTYSASK---SAAYSLTQGLRAELAAQGTLVLS-VHPGPIDTRMAAGAG 189

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 78.5 bits (194), Expect = 1e-17
 Identities = 62/245 (25%), Positives = 102/245 (41%), Gaps = 62/245 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILD--K 49
           +TGA++GIG  +V+ L+ + +  +  T RD S   E L  L           LD+ D   
Sbjct: 3   ITGASRGIGLELVRQLLARGNNTVIATCRDPSAATE-LAALGASHSRLHILELDVTDEIA 61

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILF 108
            S +A+ + L     G+DVL+NNA I      +    S+ L    + N    + +     
Sbjct: 62  ESAEAVAERLGD--AGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFL 119

Query: 109 PLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
           PLL   +  +++N+SS  G +                                   G +T
Sbjct: 120 PLLLKGARAKIINISSRVGSI-----------------------------------GDNT 144

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG----KGP 222
            GGW   +Y A+K  +  L+      L+ +  R+ + V  +HPG+V TDM       KGP
Sbjct: 145 SGGW--YSYRASKAALNMLT----KSLAVELKRDGITVVSLHPGWVRTDMGGPFAKNKGP 198

Query: 223 LTIDQ 227
           +T ++
Sbjct: 199 ITPEE 203

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 77.5 bits (192), Expect = 3e-17
 Identities = 59/247 (23%), Positives = 88/247 (35%), Gaps = 90/247 (36%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTGA++GIG  I   L       +IY    +    +    +L+           D+ D+ 
Sbjct: 10  VTGASRGIGRAIALRLAADGAKVVIY--DSNEEAAEALAAELRAAGGEARVLVFDVSDEA 67

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------ 103
           +++AL +      G +D+LVNNA I              L  M    +  +IDV      
Sbjct: 68  AVRALIEAAVEAFGALDILVNNAGI---------TRDALLPRMSEEDWDRVIDVNLTGTF 118

Query: 104 --CDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
                  P +     GR+VN+SS                          +S +       
Sbjct: 119 NVVRAALPPMIKARYGRIVNISS--------------------------VSGVT------ 146

Query: 160 AQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYV 212
                    G P  + Y+A K GV   TK      AL   L+   I     VN V PG++
Sbjct: 147 ---------GNPGQTNYSAAKAGVIGFTK------ALALELASRGIT----VNAVAPGFI 187

Query: 213 NTDMSSG 219
           +TDM+ G
Sbjct: 188 DTDMTEG 194

Length = 246

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 74.6 bits (184), Expect = 3e-16
 Identities = 51/229 (22%), Positives = 76/229 (33%), Gaps = 59/229 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTGA +GIG  I   L      +I +            E ++          +D+ D+ +
Sbjct: 11  VTGAARGIGRAIAVRLAADGAEVI-VVDICGDDAAATAELVEAAGGKARARQVDVRDRAA 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPL 110
           +KA       + G +D+LV NA I F +        +     +  N      +     P 
Sbjct: 70  LKAAVAAGVEDFGRLDILVANAGI-FPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPA 128

Query: 111 LRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           L     GR+V  SS  G                                         + 
Sbjct: 129 LIRAGGGRIVLTSSVAG----------------------------------------PRV 148

Query: 169 GWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           G+P  A YAA+K G+   +      L+   I     VN VHPG V+T M
Sbjct: 149 GYPGLAHYAASKAGLVGFTRALALELAARNIT----VNSVHPGGVDTPM 193

Length = 251

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 73.6 bits (181), Expect = 5e-16
 Identities = 61/231 (26%), Positives = 83/231 (35%), Gaps = 62/231 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARD-----ASRGQEALEKLQKLDILDKNSIKAL 55
           VTGA++GIG  I + L +     + L  R+     A        +    D  D    +AL
Sbjct: 5   VTGASRGIGIEIARALARDGY-RVSLGLRNPEDLAALSASGGDVEAVPYDARDPEDARAL 63

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL--HTMRTNYFALIDVCDILFPLLRS 113
            D L    G +DVLV+NA I       E  GS A        N  A  ++   L P LR 
Sbjct: 64  VDALRDRFGRIDVLVHNAGIGRPTTLRE--GSDAELEAHFSINVIAPAELTRALLPALRE 121

Query: 114 --HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
              GRVV ++S                                        G     G  
Sbjct: 122 AGSGRVVFLNSL--------------------------------------SGKRVLAG-- 141

Query: 172 NSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSG 219
           N+ Y+A+K     L  L HAL        +R    V+ V PG+V+T M+ G
Sbjct: 142 NAGYSASKFA---LRALAHALRQEGWDHGVR----VSAVCPGFVDTPMAQG 185

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 74.2 bits (183), Expect = 5e-16
 Identities = 57/243 (23%), Positives = 88/243 (36%), Gaps = 77/243 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------------LDI 46
           +TGA+ GIG  + K L ++   +I L AR     ++ LE L K               D+
Sbjct: 11  ITGASSGIGAELAKQLARRGYNLI-LVARR----EDKLEALAKELEDKTGVEVEVIPADL 65

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALID 102
            D  +++ L D L+   G +DVLVNNA       +  PF   +L      ++ N  AL  
Sbjct: 66  SDPEALERLEDELKERGGPIDVLVNNAGFG----TFGPFLELSLDEEEEMIQLNILALTR 121

Query: 103 VCDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
           +   + P +  R  G ++N+ S+ G                                   
Sbjct: 122 LTKAVLPGMVERGAGHIINIGSAAGL----IPTPY------------------------- 152

Query: 161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQ--HALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                       + Y+ATK  V  LSF +     L    ++    V  V PG   T+   
Sbjct: 153 -----------MAVYSATKAFV--LSFSEALREELKGTGVK----VTAVCPGPTRTEFFD 195

Query: 219 GKG 221
            KG
Sbjct: 196 AKG 198

Length = 265

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 73.6 bits (181), Expect = 8e-16
 Identities = 63/237 (26%), Positives = 96/237 (40%), Gaps = 63/237 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGII--YLTARDASRGQEALE-------KLQKLDILDKNS 51
           VTGA +GIG  I + L+     +I  Y +  D ++             +L++LD+ D   
Sbjct: 7   VTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEE 66

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
                  +E E G VD+LVNNA I     FK  S +    +    + TN  ++ +V   L
Sbjct: 67  CAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQ----EWNDVINTNLNSVFNVTQPL 122

Query: 108 FPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
           F  +     GR++N+SS                          ++ L  +F         
Sbjct: 123 FAAMCEQGYGRIINISS--------------------------VNGLKGQF--------- 147

Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
              G  N  Y+A K G+   +    AL S+ A R  + VNC+ PGY+ T M    GP
Sbjct: 148 ---GQTN--YSAAKAGMIGFT---KALASEGA-RYGITVNCIAPGYIATPMVEQMGP 195

Length = 245

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 62/229 (27%), Positives = 90/229 (39%), Gaps = 71/229 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----KLDILDKNSIKAL 55
           +TGA++GIG  I + L       + L  R A R  E   +L       +D+ D  +I A 
Sbjct: 8   ITGASRGIGAAIARELAPTHT--LLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAA 65

Query: 56  HDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS 113
            + L    G +DVLV+NA +A    V  S     +   T+  N  A  ++  +L P LR+
Sbjct: 66  VEQL----GRLDVLVHNAGVADLGPVAESTV--DEWRATLEVNVVAPAELTRLLLPALRA 119

Query: 114 -HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
            HG VV ++S  G                                           GW  
Sbjct: 120 AHGHVVFINSGAGL--------------------------------------RANPGW-- 139

Query: 173 SAYAATKLGVTKLSFLQHALLS-QDAIRED----LVVNCVHPGYVNTDM 216
            +YAA+K           AL +  DA+RE+    + V  VHPG  +TDM
Sbjct: 140 GSYAASK----------FALRALADALREEEPGNVRVTSVHPGRTDTDM 178

Length = 227

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 70.7 bits (174), Expect = 7e-15
 Identities = 63/238 (26%), Positives = 97/238 (40%), Gaps = 78/238 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA++GIG  I   L  +   +  +T R      E +E+++ L         D+ D+ +
Sbjct: 5   VTGASRGIGRAIALRLAAEGAKVA-VTDRSEEAAAETVEEIKALGGNAAALEADVSDREA 63

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
           ++AL + +EAE G VD+LVNNA I         S E + +     +  N   + +V   +
Sbjct: 64  VEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDA----VINVNLTGVFNVTQAV 119

Query: 108 FPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
              +  R  GR++N+SS  G +                                      
Sbjct: 120 IRAMIKRRSGRIINISSVVGLI-------------------------------------- 141

Query: 166 TKGGWPNSA-YAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
              G P  A YAA+K GV   TK      +L   L+   I     VN V PG+++TDM
Sbjct: 142 ---GNPGQANYAASKAGVIGFTK------SLAKELASRGIT----VNAVAPGFIDTDM 186

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 58/236 (24%), Positives = 86/236 (36%), Gaps = 73/236 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTGA +G+G  I   L +   D +++    D    +E +E ++         + D+ DK 
Sbjct: 11  VTGAARGLGRAIALRLARAGADVVVH-YRSDEEAAEELVEAVEALGRRAQAVQADVTDKA 69

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTN---YFALIDVCDI 106
           +++A         G +D+LVNNA I F+              +   N    F L+     
Sbjct: 70  ALEAAVAAAVERFGRIDILVNNAGI-FEDKPLADMSDDEWDEVIDVNLSGVFHLLRAV-- 126

Query: 107 LFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             P +R    GR+VN+SS                                          
Sbjct: 127 -VPPMRKQRGGRIVNISS-----------------------------------------V 144

Query: 165 HTKGGWP-NSAYAATKLGVTKLSFLQHALLSQDA---IREDLVVNCVHPGYVNTDM 216
               GWP  S YAA K G+  L+    AL  + A   I     VN V PG ++TDM
Sbjct: 145 AGLPGWPGRSNYAAAKAGLVGLT---KALARELAEYGIT----VNMVAPGDIDTDM 193

Length = 249

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 69.2 bits (170), Expect = 5e-14
 Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 28/138 (20%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----KLDILDKNSIKALH 56
           VTGA+ GIG    + L  Q    +Y  AR   +  E L  L      LD+ D+ SIKA  
Sbjct: 8   VTGASSGIGKATARRLAAQ-GYTVYGAARRVDK-MEDLASLGVHPLSLDVTDEASIKAAV 65

Query: 57  DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS----------QALHTMRTNYFALIDVCDI 106
           D + AE G +DVLVNNA           +GS          +A      N F    +  +
Sbjct: 66  DTIIAEEGRIDVLVNNAG----------YGSYGAIEDVPIDEARRQFEVNLFGAARLTQL 115

Query: 107 LFPLLRSH--GRVVNVSS 122
           + P +R+   GR++N+SS
Sbjct: 116 VLPHMRAQRSGRIINISS 133

Length = 273

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 68.5 bits (168), Expect = 5e-14
 Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 54/226 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           +TGA+ GIG  + +   +     + L AR   R  E   +L           LD+ D+  
Sbjct: 3   ITGASSGIGRALAREFAKA-GYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEER 61

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
            + +   LEAE GG+D+++ NA +    +  +        T+ TN      + +   P  
Sbjct: 62  NQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALPQF 121

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R+ GR        GHL  ++S                ++AL                G P
Sbjct: 122 RAKGR--------GHLVLISS----------------VAALR---------------GLP 142

Query: 172 NS-AYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            + AY+A+K  ++ L+      + +  IR    V  ++PG+++T +
Sbjct: 143 GAAAYSASKAALSSLAESLRYDVKKRGIR----VTVINPGFIDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 68.6 bits (168), Expect = 6e-14
 Identities = 55/240 (22%), Positives = 88/240 (36%), Gaps = 61/240 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG  KGIGY IV+ L       +Y  AR+     E L + ++          D+  ++ 
Sbjct: 11  VTGGTKGIGYAIVEELA-GLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCDVSSRSE 69

Query: 52  IKALHDHLEAE-HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            + L D + +   G +++LVNNA    +  + +         M TN+ A   +  +  PL
Sbjct: 70  RQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLSRLAHPL 129

Query: 111 LRSHGR--VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           L++ G   +V +SS  G +  V S A                                  
Sbjct: 130 LKASGNGNIVFISSVAG-VIAVPSGAP--------------------------------- 155

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQD 228
                 Y ATK  + +L+       ++D IR    VN V P  + T +        I Q 
Sbjct: 156 ------YGATKGALNQLTRSLACEWAKDNIR----VNAVAPWVIATPLVEP----VIQQK 201

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 68.0 bits (167), Expect = 7e-14
 Identities = 52/232 (22%), Positives = 82/232 (35%), Gaps = 64/232 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKL-------QKLDILDKNSI 52
           +TGA+ GIG    + L +   G  + L AR   R +   +++         LD+ D+ ++
Sbjct: 11  ITGASSGIGEATARALAEA--GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAV 68

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMR----TNYFALIDVCDILF 108
           +A  + L  E G +D+LVNNA +A      +P     L        TN   L++    + 
Sbjct: 69  EAAIEALPEEFGRIDILVNNAGLA----LGDPLDEADLDDWDRMIDTNVKGLLNGTRAVL 124

Query: 109 PLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
           P +  R  G ++N+ S  G   +                                     
Sbjct: 125 PGMVERKSGHIINLGSIAGRYPYPG----------------------------------- 149

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y ATK  V   S      L+   IR    V  + PG V T   S
Sbjct: 150 -----GAVYGATKAAVRAFSLGLRQELAGTGIR----VTVISPGLVETTEFS 192

Length = 246

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 68.0 bits (167), Expect = 8e-14
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 61/230 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA++GIG  I   L ++   +I          +E +E+L+           D+ D+  
Sbjct: 3   VTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDRED 62

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
           +KA+ + +E E G +D+LVNNA I      +   E      + T  T  F L     +L 
Sbjct: 63  VKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQ--AVLR 120

Query: 109 PLLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
            +++   GR++N+SS                          +  LM              
Sbjct: 121 IMIKQRSGRIINISS--------------------------VVGLM-------------- 140

Query: 168 GGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            G    A YAA+K GV   +      L+++    ++ VN V PG+++TDM
Sbjct: 141 -GNAGQANYAASKAGVIGFT----KSLAKELASRNITVNAVAPGFIDTDM 185

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 68.7 bits (168), Expect = 8e-14
 Identities = 57/164 (34%), Positives = 78/164 (47%), Gaps = 33/164 (20%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI---IYLTAR---DASRGQEALEKLQKLDILDKNSIKA 54
           +TG + GIG    + L   F      ++ TAR   D      A     +LD+ D  ++  
Sbjct: 6   ITGCSSGIG----RALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALAR 61

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPF---GSQAL-HTMRTNYFALIDVCDILFPL 110
           L + LEAEHGG+DVL+NNA       +  P    G +A+     TN FA++ V   LFPL
Sbjct: 62  LAEELEAEHGGLDVLINNAGYG----AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPL 117

Query: 111 L-RSHGRVVNVSSSCGHL--------C------HVTSEALKKKL 139
           L RS G VVN+ S  G L        C      H  S+AL+ +L
Sbjct: 118 LRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLEL 161

Length = 274

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 67.0 bits (164), Expect = 2e-13
 Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 61/233 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFD--GIIYLTARDASRGQEALE-------KLQKLDILDKNS 51
           VTG ++GIG  I + L +      IIY +A  A    E L        K  K D+  + S
Sbjct: 13  VTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVSSQES 72

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFG-SQALHTMRTNYFALIDVCDILFPL 110
           ++     ++ + G +D+L+ NA I      +  +   Q    +  N   + +       +
Sbjct: 73  VEKTFKQIQKDFGKIDILIANAGITV-HKPALDYTYEQWNKVIDVNLNGVFNCAQAAAKI 131

Query: 111 L--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
              +  G ++  +S  G + +                               Q       
Sbjct: 132 FKKQGKGSLIITASMSGTIVNR-----------------------------PQ------- 155

Query: 169 GWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSS 218
             P +AY A+K  V  L+    +L    ++  IR    VN + PGY++TD++ 
Sbjct: 156 --PQAAYNASKAAVIHLA---KSLAVEWAKYFIR----VNSISPGYIDTDLTD 199

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 67.1 bits (164), Expect = 2e-13
 Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 28/180 (15%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-----------DILDK 49
           +TGA+KGIG  I +  +      + + ARDA    +A ++L +            D+ D 
Sbjct: 14  ITGASKGIGLAIAREFLG-LGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDD 72

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
              +A+ D +E    G+ +LVNNA    +  + +    +      TN F+  ++     P
Sbjct: 73  EDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHP 132

Query: 110 LLRSHG--RVVNVSSSCGHLCHVTSEAL----KKKLLHEIKSVEELSALMNEFVELAQDG 163
           LL+ H    +VN+ S  G L HV S A     K  LL   +++          VE A+DG
Sbjct: 133 LLKQHASSAIVNIGSVSG-LTHVRSGAPYGMTKAALLQMTRNLA---------VEWAEDG 182

Length = 257

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 66.0 bits (161), Expect = 4e-13
 Identities = 58/225 (25%), Positives = 82/225 (36%), Gaps = 53/225 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKA 54
           VTGA++GIG    + L  +   +  + ARD +R   A  +  +       D+ D+  ++ 
Sbjct: 5   VTGASRGIGEATARLLHAEGYRVG-ICARDEARLAAAAAQELEGVLGLAGDVRDEADVRR 63

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSE-PFGSQALHTMRTNYFALIDVCDILFPLL-R 112
             D +E   GG+D LVNNA +       E       L        A   +      LL R
Sbjct: 64  AVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAPALLRR 123

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
             G +VNV S  G                            N F          KGG   
Sbjct: 124 GGGTIVNVGSLAG---------------------------KNAF----------KGG--- 143

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
           +AY A+K G+  LS      L +  IR    V  V PG V+T  +
Sbjct: 144 AAYNASKFGLLGLSEAAMLDLREANIR----VVNVMPGSVDTGFA 184

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 4e-13
 Identities = 52/229 (22%), Positives = 76/229 (33%), Gaps = 60/229 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKL---------QKLDILDKN 50
           VTGA +G+G    + L +   G  +      A+  +E    L            D+ D  
Sbjct: 12  VTGAARGLGAAFAEALAE--AGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA 69

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           S++   D   A  GG+D LVNNA I    +++E         M  N      +     P 
Sbjct: 70  SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPH 129

Query: 111 LR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           LR    GR+VN++S                           +AL                
Sbjct: 130 LRDSGRGRIVNLASD--------------------------TALW--------------- 148

Query: 169 GWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           G P   AY A+K  V  ++      L    I     VN + PG   T+ 
Sbjct: 149 GAPKLGAYVASKGAVIGMTRSLARELGGRGIT----VNAIAPGLTATEA 193

Length = 250

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 64.1 bits (157), Expect = 6e-13
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 21/142 (14%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTAR--DASRGQEALEKLQKL---------DILDK 49
           +TG   G+G  + + L  +    + L +R   A    E + +L+ L         D+ D+
Sbjct: 5   ITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDVADR 64

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH----TMRTNYFALIDVCD 105
           +++ AL   L A  G +D +V+NA     V    P            +        ++ +
Sbjct: 65  DALAALLAALPAALGPLDGVVHNAG----VLDDGPLEELTPERFERVLAPKVTGAWNLHE 120

Query: 106 ILFPLLRSHGRVVNVSSSCGHL 127
           +        G  V  SS  G L
Sbjct: 121 LTRD--LDLGAFVLFSSVAGVL 140

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 7e-13
 Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 12/138 (8%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG+ +G+G+ I + L      ++ +  R+A+  + A+  L+           DI D+ +
Sbjct: 16  VTGSARGLGFEIARALAGAGAHVL-VNGRNAATLEAAVAALRAAGGAAEALAFDIADEEA 74

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           + A    ++AEHG +D+LVNN     +   +E   +     + T+  A I +  +    +
Sbjct: 75  VAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRM 134

Query: 112 R--SHGRVVNVSSSCGHL 127
           +   +GR++ ++S  G +
Sbjct: 135 KRQGYGRIIAITSIAGQV 152

Length = 256

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 9e-13
 Identities = 57/241 (23%), Positives = 86/241 (35%), Gaps = 62/241 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA++GIG  I + L      +    A  A+   E + +++         + D+ D  +
Sbjct: 10  VTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAA 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAF--KVNSS--EPFGSQALHTMRTNYFALIDVCDIL 107
           +  L D  E   G +DVLVNNA +     +     E F      T+ TN      V    
Sbjct: 70  VTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFD----RTIATNLRGAFVVLREA 125

Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
              L   GR++N+S+S                                            
Sbjct: 126 ARHLGQGGRIINLSTS-------------------------------------VIALPLP 148

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS-SGKGPLTID 226
           G      YAA+K  V  L      +L+ +     + VN V PG V T++  +GK    ID
Sbjct: 149 GY---GPYAASKAAVEGLV----HVLANELRGRGITVNAVAPGPVATELFFNGKSAEQID 201

Query: 227 Q 227
           Q
Sbjct: 202 Q 202

Length = 245

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 14/133 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----QKLDILDKNSIKAL 55
           +TG   GIG  + +  ++  + +I +T R   R  EA ++L       LD+ D  S++AL
Sbjct: 10  ITGGTSGIGLALARKFLEAGNTVI-ITGRREERLAEAKKELPNIHTIVLDVGDAESVEAL 68

Query: 56  HDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
            + L +E+  +D+L+NNA I      +  +S+   +     + TN    I +     P L
Sbjct: 69  AEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADT--EIDTNLIGPIRLIKAFLPHL 126

Query: 112 RSH--GRVVNVSS 122
           +      +VNVSS
Sbjct: 127 KKQPEATIVNVSS 139

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 63.7 bits (156), Expect = 3e-12
 Identities = 53/234 (22%), Positives = 87/234 (37%), Gaps = 69/234 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA++GIG  I + L  Q   ++   A   +  +  + ++  L         D+ D  S
Sbjct: 10  VTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAES 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPL 110
           ++   D  +AE GGVD+LVNNA I  + N       +     + TN   + ++   +   
Sbjct: 70  VERAVDEAKAEFGGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARP 128

Query: 111 LRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           +     GR++N+SS  G                                           
Sbjct: 129 MMKQRSGRIINISSVVGL------------------------------------------ 146

Query: 169 GWPN---SAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
              N   + YAA+K GV             L+++     + VN V PG++ TDM
Sbjct: 147 -MGNPGQANYAASKAGV-------IGFTKSLARELASRGITVNAVAPGFIETDM 192

Length = 248

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 3e-12
 Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 58/226 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQKL--------DILDKNS 51
           +TG +KGIG+ I + L+ +  G  + +TARD    +EA  +L           D+ D+  
Sbjct: 11  ITGGSKGIGFAIAEALLAE--GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEAD 68

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTNYFALIDVCDILFPL 110
           ++   D + A  GG+DVL+ NA +       E    +    +  TN            P 
Sbjct: 69  VQRAVDAIVAAFGGLDVLIANAGVG-HFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA 127

Query: 111 L-RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           L R  G ++N+SS  G                            N F           GG
Sbjct: 128 LKRGGGYIINISSLAG---------------------------TNFF----------AGG 150

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
              +AY A+K G+   S  + A+L  D  +  + V+ + PG V T 
Sbjct: 151 ---AAYNASKFGLVGFS--EAAML--DLRQYGIKVSTIMPGSVATH 189

Length = 237

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 20/138 (14%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VT A+ GIG  I + L ++   +  + AR+    + A  +L+           D+ D   
Sbjct: 6   VTAASSGIGLAIARALAREGARVA-ICARNRENLERAASELRAGGAGVLAVVADLTDPED 64

Query: 52  IKALHDHLEAEHGGVDVLVNNA----AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
           I  L +      G VD+LVNNA       F   + E      L        ++I +   +
Sbjct: 65  IDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDE----DWLEAFDLKLLSVIRIVRAV 120

Query: 108 FPLL--RSHGRVVNVSSS 123
            P +  R  GR+VN+SS 
Sbjct: 121 LPGMKERGWGRIVNISSL 138

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 63.5 bits (155), Expect = 4e-12
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 22/143 (15%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------------LDI 46
           +TGA+ GIG    +   +    +I LT R A R    L++L                LD+
Sbjct: 5   ITGASSGIGEATARRFAKAGAKLI-LTGRRAER----LQELADELGAKFPVKVLPLQLDV 59

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTNYFALIDVCD 105
            D+ SI+A  ++L  E   +D+LVNNA +A  ++ ++    +   TM  TN   L++V  
Sbjct: 60  SDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTR 119

Query: 106 ILFPLL--RSHGRVVNVSSSCGH 126
           ++ P++  R+ G ++N+ S  G 
Sbjct: 120 LILPIMIARNQGHIINLGSIAGR 142

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 62.6 bits (152), Expect = 8e-12
 Identities = 52/221 (23%), Positives = 83/221 (37%), Gaps = 53/221 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTG   GIG  I    ++  D ++     D  RG +  E           D+ D+  +K 
Sbjct: 6   VTGGGHGIGKQICLDFLEAGDKVV-FADIDEERGADFAEAEGPNLFFVHGDVADETLVKF 64

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH 114
           +   +  + G +DVLVNNAA   K   S     +    +  N     ++       L  +
Sbjct: 65  VVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCRDELIKN 124

Query: 115 -GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS 173
            GR++N++S+        SE                                        
Sbjct: 125 KGRIINIASTRAFQSEPDSE---------------------------------------- 144

Query: 174 AYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
           AYAA+K G+  L+   HAL    ++  D+ VNC+ PG++NT
Sbjct: 145 AYAASKGGLVALT---HALAM--SLGPDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 9e-12
 Identities = 56/239 (23%), Positives = 85/239 (35%), Gaps = 78/239 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQ-----KLDILDKNSIKA 54
           +TG  +GIG    + L     G  + +   D +  +E   +L       LD+ D  S  A
Sbjct: 10  ITGGARGIGLATARALAAL--GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAA 67

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS------QALH-TMRTNYFALIDVCDIL 107
             D +EA+ G +DVLVNNA +        P G             +  N + +I    + 
Sbjct: 68  FLDAVEADLGPIDVLVNNAGVM-------PVGPFLDEPDAVTRRILDVNVYGVILGSKLA 120

Query: 108 FP--LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
            P  + R  G VVNV+S  G                                ++   G  
Sbjct: 121 APRMVPRGRGHVVNVASLAG--------------------------------KIPVPGMA 148

Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTDMSSG 219
           T        Y A+K  V   +         DA R +L      V+ V P +VNT++ +G
Sbjct: 149 T--------YCASKHAVVGFT---------DAARLELRGTGVHVSVVLPSFVNTELIAG 190

Length = 273

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 62.1 bits (151), Expect = 1e-11
 Identities = 55/231 (23%), Positives = 88/231 (38%), Gaps = 63/231 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG   GIG  I + L +    +      +  R +  L++           + D+    S
Sbjct: 5   VTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFES 64

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
            KA    +EAE G +DVLVNNA I     FK  + E + +     + TN  ++ +V   +
Sbjct: 65  CKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSA----VIDTNLNSVFNVTQPV 120

Query: 108 FP--LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
                 R  GR++N+SS  G                                        
Sbjct: 121 IDGMRERGWGRIINISSVNGQ--------------------------------------- 141

Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            KG +  + Y+A K G+   +      L+Q+   + + VN + PGY+ TDM
Sbjct: 142 -KGQFGQTNYSAAKAGMIGFT----KALAQEGATKGVTVNTISPGYIATDM 187

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 10/131 (7%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-----DILDKNSIKAL 55
           +TG   GIG  + K  ++  + +I +  R+  R  EA  +  ++     D+ D++S + L
Sbjct: 10  ITGGASGIGLALAKRFLELGNTVI-ICGRNEERLAEAKAENPEIHTEVCDVADRDSRREL 68

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVN--SSEPFGSQALHTMRTNYFALIDVCDILFPLL-- 111
            + L+ E+  ++VL+NNA I    +   +E     A   + TN  A I +  +L P L  
Sbjct: 69  VEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLR 128

Query: 112 RSHGRVVNVSS 122
           +    ++NVSS
Sbjct: 129 QPEATIINVSS 139

Length = 245

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.2 bits (146), Expect = 5e-11
 Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 51/229 (22%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK---LQKLDILDKNSIKALHD 57
           +TG  +GIG  I +  +++   +  L     +  +E  EK     K D+ +++ +K   +
Sbjct: 12  ITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKE 71

Query: 58  HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTNYFALIDVCDILFPLLR--SH 114
            +E E G VDVLVNNA I + +   E F  +  + M + N    I       PLL+   +
Sbjct: 72  VVEKEFGRVDVLVNNAGIMYLM-PFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKN 130

Query: 115 GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA 174
           G +VN++S+ G                                     G+  +G    + 
Sbjct: 131 GAIVNIASNAG------------------------------------IGTAAEG---TTF 151

Query: 175 YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS-SGKGP 222
           YA TK G+  L+      L +  IR    VN V PG+V TDM+ SGK  
Sbjct: 152 YAITKAGIIILTRRLAFELGKYGIR----VNAVAPGWVETDMTLSGKSQ 196

Length = 255

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 60.2 bits (146), Expect = 5e-11
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 14/134 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG+++GIGY + +GL Q    +I L  RD ++   A E L+           D+ D ++
Sbjct: 15  VTGSSQGIGYALAEGLAQAGAEVI-LNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDA 73

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFPL 110
           ++A  D  EAE G +D+LVNNA + F+    E F + A    +RTN  ++  V   +   
Sbjct: 74  VRAAIDAFEAEIGPIDILVNNAGMQFR-TPLEDFPADAFERLLRTNISSVFYVGQAVARH 132

Query: 111 L--RSHGRVVNVSS 122
           +  R  G+++N++S
Sbjct: 133 MIARGAGKIINIAS 146

Length = 255

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 60.5 bits (147), Expect = 5e-11
 Identities = 58/233 (24%), Positives = 85/233 (36%), Gaps = 72/233 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----------QKLDILDKN 50
           VTGA  GIG  I + L      ++     +   G EA  K+             D+  ++
Sbjct: 6   VTGAASGIGLAIARALAAAGANVVVNDFGEE--GAEAAAKVAGDAGGSVIYLPADVTKED 63

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT----MRTNYFALIDVCDI 106
            I  +     AE GG+D+LVNNA I   V   E F  +        M T+ F  I     
Sbjct: 64  EIADMIAAAAAEFGGLDILVNNAGIQH-VAPIEEFPPEDWDRIIAVMLTSAFHTIRAA-- 120

Query: 107 LFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             P ++    GR++N++S+ G +                                    S
Sbjct: 121 -LPHMKKQGWGRIINIASAHGLV-----------------------------------AS 144

Query: 165 HTKGGWPNSAYAATK---LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
             K     SAY A K   +G+TK+  L+ A          + VN + PGYV T
Sbjct: 145 PFK-----SAYVAAKHGLIGLTKVLALEVA-------EHGITVNAICPGYVRT 185

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 60.0 bits (146), Expect = 6e-11
 Identities = 60/232 (25%), Positives = 85/232 (36%), Gaps = 67/232 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARD-ASRGQEALEK------LQKLDILDK 49
           VTGA++GIG  I K L +  DG    + Y +++  A      +E         + D+ D 
Sbjct: 8   VTGASRGIGRAIAKRLAR--DGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQADVSDP 65

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCD 105
           + +  L D  E   GGVD+LVNNA +         S E F          N      V  
Sbjct: 66  SQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFD----RMFTVNTKGAFFVLQ 121

Query: 106 ILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
                LR  GR++N+SSS                                          
Sbjct: 122 EAAKRLRDGGRIINISSSL----------------------------------------- 140

Query: 166 TKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           T    PN  AYA +K  V   +     +L+++     + VN V PG V+TDM
Sbjct: 141 TAAYTPNYGAYAGSKAAVEAFTR----VLAKELGGRGITVNAVAPGPVDTDM 188

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.8 bits (146), Expect = 7e-11
 Identities = 49/233 (21%), Positives = 77/233 (33%), Gaps = 66/233 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL--------DILDKNSI 52
           VTGA+ GIG GI +    +   ++ +T R+    +    ++           D+ D+  +
Sbjct: 10  VTGASSGIGEGIARRFAAEGARVV-VTDRNEEAAERVAAEILAGGRAIAVAADVSDEADV 68

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILF---- 108
           +A         G VD+LVNNA    +   + P            +   ++V         
Sbjct: 69  EAAVAAALERFGSVDILVNNAGTTHR---NGPLLDVDEAEFDRIF--AVNVKSPYLWTQA 123

Query: 109 --PLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             P +R    G +VNV+S+ G                                       
Sbjct: 124 AVPAMRGEGGGAIVNVASTAGL-------------------------------------- 145

Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
             + G     Y A+K  V  L+    A L  D IR    VN V P  V T + 
Sbjct: 146 RPRPGL--GWYNASKGAVITLTKALAAELGPDKIR----VNAVAPVVVETGLL 192

Length = 251

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 8e-11
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 17/134 (12%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ--EALEKLQ------KLDILDKNSI 52
           VTG   GIG  I   L ++   I  +  R A   +  E L  LQ      ++D+ D    
Sbjct: 12  VTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQC 70

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKV---NSSEPFGSQALHTMRTNYFALIDVCDILFP 109
           +   +   A+ G +D LVNNA +   V      E F   +L     +Y+ +   C    P
Sbjct: 71  RDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAF-VASLERNLIHYYVMAHYC---LP 126

Query: 110 LLR-SHGRVVNVSS 122
            L+ S G +VN+SS
Sbjct: 127 HLKASRGAIVNISS 140

Length = 258

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 23/142 (16%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-----------KLQKLDILDK 49
           VTGA+ G G      L ++   ++  T R+  + +  L            K+Q+LD+ D+
Sbjct: 8   VTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ 66

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAF----KVNSSEPFGSQALHTMRTNYFALIDVCD 105
           NSI      +  E G +D+LVNNA  A     +    E +  Q      TN F  I V  
Sbjct: 67  NSIHNFQL-VLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQ----FETNVFGAISVTQ 121

Query: 106 ILFPLLRSH--GRVVNVSSSCG 125
            + P +R    G+++N+SS  G
Sbjct: 122 AVLPYMRKQKSGKIINISSISG 143

Length = 280

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 1e-10
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 30/143 (20%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           +TGA+ GIG      + +     ++L AR+     E + +++           D+ D  +
Sbjct: 376 ITGASSGIGRATAIKVAEA-GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAA 434

Query: 52  IKALHDHLEAEHGGVDVLVNNA------AIAFKVNSSEPFGSQALH----TMRTNYFALI 101
           +      + AEHG VD LVNNA      ++    NS++ F     H    TM  NYF  +
Sbjct: 435 VDHTVKDILAEHGHVDYLVNNAGRSIRRSVE---NSTDRF-----HDYERTMAVNYFGAV 486

Query: 102 DVCDILFPLLRSH--GRVVNVSS 122
            +   L P +R    G VVNVSS
Sbjct: 487 RLILGLLPHMRERRFGHVVNVSS 509

Length = 657

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 6/126 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQ-EALEKLQKLDILDKNSIKALHDH 58
           VTGA+ GIG    + L +   G  ++ T+R+ +R       +L +LD+ D  S++A  D 
Sbjct: 9   VTGASSGIGRATAEKLARA--GYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDE 66

Query: 59  LEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGR 116
           + A  G +DVLVNNA +     + E   +QA     TN F ++ +   + P +R+   GR
Sbjct: 67  VIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGR 126

Query: 117 VVNVSS 122
           ++N+SS
Sbjct: 127 IINISS 132

Length = 270

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 58/229 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQKL---------DILDKN 50
           +TGA +GIG  +   L ++  G+ + L AR     +   E+++           D+ D  
Sbjct: 12  ITGAGRGIGRAVAIALAKE--GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYE 69

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            + A  + L+ E G +D+L+NNA I+      E   ++    ++ N   +      + P 
Sbjct: 70  EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPS 129

Query: 111 L--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           +  R  G ++N+SS+ G                                         KG
Sbjct: 130 MIERQSGDIINISSTAGQ----------------------------------------KG 149

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
               SAY+A+K GV  L+      L Q+  + ++ V  + P  V TDM+
Sbjct: 150 AAVTSAYSASKFGVLGLT----ESLMQEVRKHNIRVTALTPSTVATDMA 194

Length = 239

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 58/240 (24%), Positives = 88/240 (36%), Gaps = 86/240 (35%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA  GIG  I   L ++   ++ +   +      A E LQK          D+ D+ +
Sbjct: 9   VTGAASGIGLEIALALAKEGAKVV-IADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEA 67

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFG------------SQALHTMRTNYFA 99
           I A  D+     GGVD+LVNNA I   V   E F               A  T +     
Sbjct: 68  INAGIDYAVETFGGVDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTK----- 121

Query: 100 LIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
                    P++++   GR++N++S  G +                              
Sbjct: 122 ------AALPIMKAQGGGRIINMASVHGLV------------------------------ 145

Query: 158 ELAQDGSHTKGGWPNSAYAATK---LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
                GS  K     +AY + K   +G+TK+  L+ A      +     VN + PGYV+T
Sbjct: 146 -----GSAGK-----AAYVSAKHGLIGLTKVVALEGA---THGVT----VNAICPGYVDT 188

Length = 258

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 58/244 (23%), Positives = 91/244 (37%), Gaps = 87/244 (35%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------------LDI 46
           +TGA+ GIG  +   L +     + L+AR     +E LE+++               LD+
Sbjct: 8   ITGASSGIGEELAYHLARL-GARLVLSARR----EERLEEVKSECLELGAPSPHVVPLDM 62

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT----MRTNYFALID 102
            D    + + +      GG+D+L+NNA I    +    F   ++      M  NYF  + 
Sbjct: 63  SDLEDAEQVVEEALKLFGGLDILINNAGI----SMRSLFHDTSIDVDRKIMEVNYFGPVA 118

Query: 103 VCDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
           +     P L  RS G +V VSS  G                                   
Sbjct: 119 LTKAALPHLIERSQGSIVVVSSIAG----------------------------------- 143

Query: 161 QDGSHTKGGWP-NSAYAATKLGVTKLSFLQHALLS-QDAIREDL-----VVNCVHPGYVN 213
                 K G P  +AYAA+K          HAL    D++R +L      V  V PG ++
Sbjct: 144 ------KIGVPFRTAYAASK----------HALQGFFDSLRAELSEPNISVTVVCPGLID 187

Query: 214 TDMS 217
           T+++
Sbjct: 188 TNIA 191

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 57.6 bits (139), Expect = 4e-10
 Identities = 64/231 (27%), Positives = 95/231 (41%), Gaps = 65/231 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIY---------LTARDASRGQEALEKLQKLDILDKNS 51
           VTGA+ GIG  I + L  Q  G I          L A  A  G+    K+   ++ D++ 
Sbjct: 11  VTGASGGIGEEIARLLHAQ--GAIVGLHGTRVEKLEALAAELGERV--KIFPANLSDRDE 66

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
           +KAL    EA+  GVD+LVNNA I      V  S+      L    T  F L    ++  
Sbjct: 67  VKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTR--ELTH 124

Query: 109 PLL-RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
           P++ R +GR++N++S  G    VT                                    
Sbjct: 125 PMMRRRYGRIINITSVVG----VT------------------------------------ 144

Query: 168 GGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
            G P  A Y A+K G+   S      L+Q+    ++ VNCV PG++ + M+
Sbjct: 145 -GNPGQANYCASKAGMIGFS----KSLAQEIATRNVTVNCVAPGFIESAMT 190

Length = 245

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 57.5 bits (139), Expect = 5e-10
 Identities = 60/238 (25%), Positives = 94/238 (39%), Gaps = 58/238 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTGAN G+G GI  GL +    I+     + S  Q+ +E L         D+ D  +IKA
Sbjct: 10  VTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKA 69

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDIL---FPL 110
           L D    E G +D+LVNNA I  +   +E F  +     M  N  ++  +       F  
Sbjct: 70  LVDSAVEEFGHIDILVNNAGI-IRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLK 128

Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
               G+++N++S                              M  F          +GG 
Sbjct: 129 QGRGGKIINIAS------------------------------MLSF----------QGGI 148

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQD 228
              +Y A+K  V  L+     LL+ +   + + VN + PGY+ T+ +     L  D+D
Sbjct: 149 RVPSYTASKHAVAGLT----KLLANEWAAKGINVNAIAPGYMATNNTQ---ALRADED 199

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 57.3 bits (139), Expect = 6e-10
 Identities = 42/234 (17%), Positives = 74/234 (31%), Gaps = 61/234 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           +TG   GIG  +     ++   ++ L   +    + A    +        K D+  +  +
Sbjct: 4   ITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKREEV 63

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL- 111
                 ++ E G V +L+NNA +       E    +   T   N  A         P + 
Sbjct: 64  YEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFLPDML 123

Query: 112 -RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
            R+HG +V ++S  G +                 S   L                     
Sbjct: 124 ERNHGHIVTIASVAGLI-----------------SPAGL--------------------- 145

Query: 171 PNSAYAATKLGVTKLSF---LQHALLSQDA--IREDLVVNCVHPGYVNTDMSSG 219
             + Y A+K     + F   L+  L +     I+       V P ++NT M  G
Sbjct: 146 --ADYCASKAAA--VGFHESLRLELKAYGKPGIK----TTLVCPYFINTGMFQG 191

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 57.0 bits (138), Expect = 7e-10
 Identities = 54/242 (22%), Positives = 84/242 (34%), Gaps = 59/242 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
           VTG  +G+G    + L+ +    + L+      GQ A  +L        LD+ D++   A
Sbjct: 10  VTGGARGLGLAHARLLVAE-GAKVVLSDILDEEGQAAAAELGDAARFFHLDVTDEDGWTA 68

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH 114
           + D      G +DVLVNNA I            +    +  N   +      + P ++  
Sbjct: 69  VVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTRAVIPPMKEA 128

Query: 115 GR--VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
           G   ++N+SS                          +  L+               G P 
Sbjct: 129 GGGSIINMSS--------------------------IEGLV---------------GDPA 147

Query: 173 -SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQD 228
            +AY A+K  V   TK + L         IR    VN VHPGY+ T M+        +  
Sbjct: 148 LAAYNASKGAVRGLTKSAAL-ECATQGYGIR----VNSVHPGYIYTPMTDELLIAQGEMG 202

Query: 229 NI 230
           N 
Sbjct: 203 NY 204

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 56.5 bits (137), Expect = 8e-10
 Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 13/137 (9%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGII-YLTARDASRGQEALEKLQ--------KLDILDKNS 51
           +TGA++GIG  + + L+++    +  L AR     QE  E+L+        K D+ D   
Sbjct: 4   LTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSDAAG 63

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFA---LIDVCDIL 107
           ++ L + +    G  D+L+NNA     V+  E      L      N  +   L       
Sbjct: 64  VEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTSTLLRA 123

Query: 108 FPLLRSHGRVVNVSSSC 124
           F        VVNVSS  
Sbjct: 124 FKKRGLKKTVVNVSSGA 140

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 25/142 (17%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------LDILDKNSIK 53
           +TG + G G  + +  +     ++  T R  +  +   E L         LD+ D ++I 
Sbjct: 9   ITGVSSGFGRALAQAALAAGHRVV-GTVRSEAA-RADFEALHPDRALARLLDVTDFDAID 66

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS---QALHTMR----TNYFALIDVCDI 106
           A+    EA  G +DVLVNNA            G+     L  MR     N F  + +   
Sbjct: 67  AVVADAEATFGPIDVLVNNAGYGH-------EGAIEESPLAEMRRQFEVNVFGAVAMTKA 119

Query: 107 LFPLLRS--HGRVVNVSSSCGH 126
           + P +R+   G +VN++S  G 
Sbjct: 120 VLPGMRARRRGHIVNITSMGGL 141

Length = 277

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 19/140 (13%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-----------LQKLDILDK 49
           VTGAN G+GY     L  +   ++ L  R+  +G+ A  +           LQ+LD+   
Sbjct: 21  VTGANTGLGYETAAALAAKGAHVV-LAVRNLDKGKAAAARITAATPGADVTLQELDLTSL 79

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFAL-IDVCDI 106
            S++A  D L A +  +D+L+NNA + +  K  +++ F  Q   T    +FAL   + D 
Sbjct: 80  ASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQ-FGTNHLGHFALTGLLLDR 138

Query: 107 LFPLLRSHGRVVNVSSSCGH 126
           L P+  S  RVV VSS  GH
Sbjct: 139 LLPVPGS--RVVTVSSG-GH 155

Length = 306

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 64/207 (30%)

Query: 33  RGQEALEKLQKL---------DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE 83
            G+E L+ L++          D+ D + + AL    E + GG+DV+VNNA +A    S  
Sbjct: 36  GGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVA----SGG 91

Query: 84  PFGSQALH----TMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKK 137
            F   +L      +  N   ++  C    PL +    GR+VN++S               
Sbjct: 92  FFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIAS--------------- 136

Query: 138 KLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDA 197
                      ++ LM               G   S+Y   K GV  LS      L+ D 
Sbjct: 137 -----------MAGLMQ--------------GPAMSSYNVAKAGVVALSETLLVELADDE 171

Query: 198 IREDLVVNCVHPGYVNTDM-SSGKGPL 223
           I     V+ V P +  T++  S +GP 
Sbjct: 172 IG----VHVVCPSFFQTNLLDSFRGPN 194

Length = 270

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 55.6 bits (134), Expect = 2e-09
 Identities = 48/228 (21%), Positives = 78/228 (34%), Gaps = 60/228 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTGA  GIG      L ++    + +   D    Q  + ++       ++D+ D+  + A
Sbjct: 8   VTGAGAGIGAACAARLARE-GARVVVADIDGGAAQAVVAQIAGGALALRVDVTDEQQVAA 66

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFPL 110
           L +    E GG+D+LVNNA     ++ +       L     TM  N       C    P 
Sbjct: 67  LFERAVEEFGGLDLLVNNAGA---MHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAAPR 123

Query: 111 LRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           + +   G +VN+SS                                         +   G
Sbjct: 124 MIARGGGSIVNLSS----------------------------------------IAGQSG 143

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                AY A+K  +  L+    A L    IR     N + PG ++T +
Sbjct: 144 DPGYGAYGASKAAIRNLTRTLAAELRHAGIR----CNALAPGLIDTPL 187

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 56/237 (23%), Positives = 88/237 (37%), Gaps = 74/237 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKL----------QKLDILDK 49
           +TGA +GIG  I + L    DG  I L   +     ++  +              D+ DK
Sbjct: 7   ITGAAQGIGRAIAERLAA--DGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTDK 64

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
           + ++AL D    + G  DV+VNNA IA  +        + L  +       ++V  +LF 
Sbjct: 65  DDVEALIDQAVEKFGSFDVMVNNAGIA-PITPLLTITEEDLKKVYA-----VNVFGVLFG 118

Query: 110 L---------LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
           +         L   G+++N SS  G                                   
Sbjct: 119 IQAAARQFKKLGHGGKIINASSIAGVQ--------------------------------- 145

Query: 161 QDGSHTKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                   G+PN  AY+A+K  V  L+  Q A  +Q+   + + VN   PG V T+M
Sbjct: 146 --------GFPNLGAYSASKFAVRGLT--QTA--AQELAPKGITVNAYAPGIVKTEM 190

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)

Query: 1  VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQKL---------DILDKN 50
          VTG  +GIG GI + L    FD +      D        ++L+ L         D+ D +
Sbjct: 7  VTGGRRGIGLGIARALAAAGFD-LAINDRPDDEELAATQQELRALGVEVIFFPADVADLS 65

Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKV 79
          + +A+ D  +A  G +D LVNNA +  KV
Sbjct: 66 AHEAMLDAAQAAWGRIDCLVNNAGVGVKV 94

Length = 256

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.6 bits (135), Expect = 2e-09
 Identities = 49/236 (20%), Positives = 84/236 (35%), Gaps = 73/236 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA+ GIG  I + L ++   ++     +    QE LE++++          D+  +  
Sbjct: 10  VTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEED 69

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT----MRTN----YFALIDV 103
           ++ L + +  + G +D+LVNNA I+    +               +  N           
Sbjct: 70  VENLVEQIVEKFGKIDILVNNAGIS----NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYA 125

Query: 104 CDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
              +  + R  G +VN+SS  G                          L+          
Sbjct: 126 LPYM--IKRKSGVIVNISSIWG--------------------------LIGA-------- 149

Query: 164 SHTKGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
           S          Y+A+K  V   +    AL   L+   IR    VN V PG ++T+M
Sbjct: 150 SCE------VLYSASKGAVNAFT---KALAKELAPSGIR----VNAVAPGAIDTEM 192

Length = 247

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 55.6 bits (134), Expect = 2e-09
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 11/133 (8%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----KLQKLDILDKNSIKALH 56
           VTGA +GIG  + + L+Q    +I   A D             +L  LD+ D  +++ + 
Sbjct: 3   VTGAAQGIGRAVARHLLQAGATVI---ALDLPFVLLLEYGDPLRLTPLDVADAAAVREVC 59

Query: 57  DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPLL--RS 113
             L AEHG +D LVN A +  +  +++P  ++    T   N   + ++   + P +  R 
Sbjct: 60  SRLLAEHGPIDALVNCAGV-LRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPHMKDRR 118

Query: 114 HGRVVNVSSSCGH 126
            G +V V+S+  H
Sbjct: 119 TGAIVTVASNAAH 131

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 49/234 (20%), Positives = 81/234 (34%), Gaps = 65/234 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG ++GIG  I   L ++   ++    +      E   ++++L         D+     
Sbjct: 3   VTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQPQD 62

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           ++ +   ++   G +DVLV+NAA       SE   +     M TN  AL+        L+
Sbjct: 63  VEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAKLM 122

Query: 112 R--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           R    GR+V +SS                                        GS     
Sbjct: 123 RERGGGRIVAISSL---------------------------------------GS----I 139

Query: 170 WPNSAYAATKLGVTKL---SFLQH--ALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                Y A  +G  K    + +++    L    IR    VN V PG ++TD  +
Sbjct: 140 RALPNYLA--VGTAKAALEALVRYLAVELGPRGIR----VNAVSPGVIDTDALA 187

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 54.8 bits (132), Expect = 4e-09
 Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 18/138 (13%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
           VTGA  G G  I +  IQQ   +I        R QE L++L+          +LD+ ++ 
Sbjct: 5   VTGATAGFGECITRRFIQQGHKVI-----ATGRRQERLQELKDELGDNLYIAQLDVRNRA 59

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTNYFALIDVCDILFP 109
           +I+ +   L AE   +DVLVNNA +A  +  +     +   TM  TN   L+ +   + P
Sbjct: 60  AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119

Query: 110 LL--RSHGRVVNVSSSCG 125
            +  R+HG ++N+ S+ G
Sbjct: 120 GMVERNHGHIINIGSTAG 137

Length = 248

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 5e-09
 Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 10/84 (11%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
          +TG+ +GIG+ +  GL +    II +    A R + A+ KL++          ++  K  
Sbjct: 14 ITGSAQGIGFLLATGLAEYGAEII-INDITAERAELAVAKLRQEGIKAHAAPFNVTHKQE 72

Query: 52 IKALHDHLEAEHGGVDVLVNNAAI 75
          ++A  +H+E + G +DVL+NNA I
Sbjct: 73 VEAAIEHIEKDIGPIDVLINNAGI 96

Length = 254

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 44/237 (18%), Positives = 75/237 (31%), Gaps = 70/237 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL--------QKLDILDKNSI 52
           +TG   GIG    K L+++   +  L   +       L+ +         + D+     +
Sbjct: 5   ITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTSWEQL 64

Query: 53  KALHDHLEAEHGGVDVLVNNAAIA-----FKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
            A       + G VD+L+NNA I             P       T+  N   +I+   + 
Sbjct: 65  AAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPP---PWEKTIDVNLTGVINTTYLA 121

Query: 108 FPLLRSH-----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
              +  +     G +VN+ S  G              L+                     
Sbjct: 122 LHYMDKNKGGKGGVIVNIGSVAG--------------LYPAPQF---------------- 151

Query: 163 GSHTKGGWPNSAYAATKLGVTKLSF---LQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                       Y+A+K GV  + F   L   L  +  +R    VN + PG+ NT +
Sbjct: 152 ----------PVYSASKHGV--VGFTRSLADLLEYKTGVR----VNAICPGFTNTPL 192

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 60/260 (23%), Positives = 99/260 (38%), Gaps = 93/260 (35%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIY---LTARDASRGQEALEKLQKLDILDKN-----SI 52
           +TGA+ G+G     G+ ++F        L AR   R    LE+L K ++L +      ++
Sbjct: 7   ITGASSGLG----AGMAREFAAKGRDLALCARRTDR----LEEL-KAELLARYPGIKVAV 57

Query: 53  KAL--HDH---------LEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH----TMRTNY 97
            AL  +DH            E GG+D ++ NA I          G+        T  TN+
Sbjct: 58  AALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIG----KGARLGTGKFWANKATAETNF 113

Query: 98  FALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
            A +  C+    + R  G         GHL  ++S                +SA+     
Sbjct: 114 VAALAQCEAAMEIFREQGS--------GHLVLISS----------------VSAVR---- 145

Query: 158 ELAQDGSHTKGGWPN--SAYAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPG 210
                      G P   +AYAA+K GV  L          + +R +L      V+ + PG
Sbjct: 146 -----------GLPGVKAAYAASKAGVASLG---------EGLRAELAKTPIKVSTIEPG 185

Query: 211 YVNTDMS--SGKGPLTIDQD 228
           Y+ ++M+  +   P  +D +
Sbjct: 186 YIRSEMNAKAKSTPFMVDTE 205

Length = 248

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 53.8 bits (130), Expect = 9e-09
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 24/144 (16%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------------LDIL 47
           +TG + GIG  + K L+++    + + AR  S+ +EA+E+++               D+ 
Sbjct: 6   ITGGSSGIGKALAKELVKE-GANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADLS 64

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRTNYFALIDV 103
           D   ++        + G  D++VN A I+    F+  ++E F       M  NYF  ++V
Sbjct: 65  DYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERG----MDVNYFGSLNV 120

Query: 104 CDILFPLL--RSHGRVVNVSSSCG 125
              + PL+  +  G +V VSS   
Sbjct: 121 AHAVLPLMKEQRPGHIVFVSSQAA 144

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 53.7 bits (130), Expect = 9e-09
 Identities = 35/151 (23%), Positives = 53/151 (35%), Gaps = 49/151 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQ------FDGIIYLTARDASRGQEALEKLQKLDILDKNSIKA 54
           VTGA +GIGY +    ++       FD       +     ++       LD+ D  ++  
Sbjct: 13  VTGAAQGIGYAVALAFVEAGAKVIGFD-------QAFLTQEDYPFATFVLDVSDAAAVAQ 65

Query: 55  LHDHLEAEHGGVDVLVNNAAI----------------AFKVNSSEPFG-SQAL--HTMRT 95
           +   L AE G +DVLVN A I                 F VN+   F   +A+     R 
Sbjct: 66  VCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRR- 124

Query: 96  NYFALIDVCDILFPLLRSHGRVVNVSSSCGH 126
                           +  G +V V S+  H
Sbjct: 125 ----------------QRSGAIVTVGSNAAH 139

Length = 252

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 14/135 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----------QKLDILDK 49
           VTG + GIG   V+ L++     + +  RD  R   A  +L            + D+LD+
Sbjct: 13  VTGGSSGIGLATVELLLEA-GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDE 71

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
             + A    +EA  GGVD+LVNNA        ++         +   YF++I+      P
Sbjct: 72  ADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLP 131

Query: 110 LLRS--HGRVVNVSS 122
           LLR+     +V V+S
Sbjct: 132 LLRASAAASIVCVNS 146

Length = 265

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 12/86 (13%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDK 49
          VTGA +GIG  I +   ++    + L   DA+  + A   +              D+ D 
Sbjct: 12 VTGAAQGIGAAIARAFARE-GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA 70

Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAI 75
           S+ A     E   G +DVLVNNA I
Sbjct: 71 ASVAAAVAAAEEAFGPLDVLVNNAGI 96

Length = 260

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 55/241 (22%), Positives = 77/241 (31%), Gaps = 81/241 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTA--RDASRGQEALEK-------LQKLDILDKNS 51
           +TG + G G  + K L     G   L         G + L +         +LD+     
Sbjct: 5   ITGCDSGFGNLLAKKLDSL--GFTVLAGCLTKNGPGAKELRRVCSDRLRTLQLDVTKPEQ 62

Query: 52  IKALHDHLEAEHGGVDV--LVNNAAIAFKVNSSEPFGSQALHTMRT-------NYFALID 102
           IK     ++   G   +  LVNNA I          G + L  M         N F  ++
Sbjct: 63  IKRAAQWVKEHVGEKGLWGLVNNAGI------LGFGGDEELLPMDDYRKCMEVNLFGTVE 116

Query: 103 VCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQ 161
           V     PLLR + GRVVNVSS  G    V   A                           
Sbjct: 117 VTKAFLPLLRRAKGRVVNVSSMGG---RVPFPAG-------------------------- 147

Query: 162 DGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTDM 216
                       AY A+K  V   S         D++R +L      V+ + PG   T +
Sbjct: 148 -----------GAYCASKAAVEAFS---------DSLRRELQPWGVKVSIIEPGNFKTGI 187

Query: 217 S 217
           +
Sbjct: 188 T 188

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 58/234 (24%), Positives = 87/234 (37%), Gaps = 70/234 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTGA  GIG    +   +  D ++    R+  R +E  + L        +D+ D+  I+ 
Sbjct: 10  VTGAAGGIGRAACQRFARAGDQVVVAD-RNVERARERADSLGPDHHALAMDVSDEAQIRE 68

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT--------MRTNYF-ALIDVCD 105
             + L  E G +DVLVNNA +      ++P  +  L T           N   A +   +
Sbjct: 69  GFEQLHREFGRIDVLVNNAGV------TDPTMTATLDTTLEEFARLQAINLTGAYLVARE 122

Query: 106 ILFPLLRSHGR---VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
            L  L+   G    +VNV+S  G +      AL K+                        
Sbjct: 123 AL-RLMIEQGHGAAIVNVASGAGLV------ALPKR------------------------ 151

Query: 163 GSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                     +AY+A+K  V  L+       +   IR    VN V PGYV T M
Sbjct: 152 ----------TAYSASKAAVISLTRSLACEWAAKGIR----VNAVLPGYVRTQM 191

Length = 520

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 52.3 bits (125), Expect = 3e-08
 Identities = 57/238 (23%), Positives = 93/238 (39%), Gaps = 55/238 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG   GIG  I + L +    ++     ++ R  + LE  + L         ++ D +S
Sbjct: 8   VTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDS 67

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
            KA  D ++AE G +DVLVNNA I   V   +         + TN  +L +V   +   +
Sbjct: 68  TKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGM 127

Query: 112 --RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
             R  GR++N+SS  G                                         KG 
Sbjct: 128 VERGWGRIINISSVNGQ----------------------------------------KGQ 147

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           +  + Y+  K G+   +      L+Q+   + + VN V PGY+ TDM     P  +++
Sbjct: 148 FGQTNYSTAKAGIHGFTM----SLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEK 201

Length = 246

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 54/226 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA+ GIG  I   L      ++          +E +E+++ +         D+  +  
Sbjct: 8   VTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSKEED 67

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           + AL      E G +D+LVNNA +              L                     
Sbjct: 68  VVALFQSAIKEFGTLDILVNNAGL----QGDASSHEMTLEDWN----------------- 106

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK-SVEELSALMNEFVELAQDGSHTKGGW 170
               +V++V+ +   LC    EA+K+    +IK  +  +S++            H K  W
Sbjct: 107 ----KVIDVNLTGQFLC--AREAIKRFRKSKIKGKIINMSSV------------HEKIPW 148

Query: 171 P-NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
           P +  YAA+K GV  ++      L+Q+   + + VN + PG +NT 
Sbjct: 149 PGHVNYAASKGGVKMMT----KTLAQEYAPKGIRVNAIAPGAINTP 190

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 56/234 (23%), Positives = 80/234 (34%), Gaps = 78/234 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL----------DILDKN 50
           +TG  +GIG  +        D ++ +      R  E  +KL +           DI D+ 
Sbjct: 274 ITGGARGIGRAVADRFAAAGDRLLII-----DRDAEGAKKLAEALGDEHLSVQADITDEA 328

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPF---GSQALHTMRTNY-------FAL 100
           ++++    ++A  G +DVLVNNA IA      E F     Q+       Y       FA 
Sbjct: 329 AVESAFAQIQARWGRLDVLVNNAGIA------EVFKPSLEQSAEDFTRVYDVNLSGAFAC 382

Query: 101 IDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
                    L+   G +VN+ S    L      AL                         
Sbjct: 383 ARAAAR---LMSQGGVIVNLGSIASLL------ALP------------------------ 409

Query: 161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
                     P +AY A+K  VT LS       +   IR    VN V PGY+ T
Sbjct: 410 ----------PRNAYCASKAAVTMLSRSLACEWAPAGIR----VNTVAPGYIET 449

Length = 520

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 20/137 (14%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-----------LQKLDILDK 49
           VTGA+ G+G G+ + L      +I L  R+ ++G+ A+             L+ LD+   
Sbjct: 19  VTGASDGLGLGLARRLAAAGAEVI-LPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSL 77

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
            S+ AL + L AE   + +L+NNA +     +  +++ F  Q   T    +FAL      
Sbjct: 78  ASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQ-FGTNHLGHFALTAH--- 133

Query: 107 LFPLLRS-HGRVVNVSS 122
           L PLLR+   RV + SS
Sbjct: 134 LLPLLRAGRARVTSQSS 150

Length = 313

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 51.3 bits (123), Expect = 6e-08
 Identities = 53/220 (24%), Positives = 74/220 (33%), Gaps = 38/220 (17%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           +TGA  GIG    + L      +I +  R+A             D+       A    + 
Sbjct: 4   ITGAASGIGAATAELLEDAGHTVIGIDLREAD---------VIADLSTPEGRAAAIADVL 54

Query: 61  AEHGGV-DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRV 117
           A   GV D LVN A +     +           ++ NYF L  + + L P LR       
Sbjct: 55  ARCSGVLDGLVNCAGVGGTTVAGL--------VLKVNYFGLRALMEALLPRLRKGHGPAA 106

Query: 118 VNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAA 177
           V VSS  G         L K L          +      V LA+            AYA 
Sbjct: 107 VVVSSIAGAGWAQDKLELAKAL---------AAGTEARAVALAEHAGQPG----YLAYAG 153

Query: 178 TKLGVTKLSFLQ-HALLSQDAIREDLVVNCVHPGYVNTDM 216
           +K  +T  +  +    L    +R    VN V PG V T +
Sbjct: 154 SKEALTVWTRRRAATWLYGAGVR----VNTVAPGPVETPI 189

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 51.3 bits (123), Expect = 6e-08
 Identities = 53/248 (21%), Positives = 82/248 (33%), Gaps = 96/248 (38%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL----------DILDKN 50
           VTG+  GIG GI + L      I+     DA+  +     L             D+    
Sbjct: 7   VTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLSKPA 66

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAF----------------KVNSSEPFGSQALHTMR 94
           +I+ +  + + + GGVD+LVNNA I                   +N S  F     HT R
Sbjct: 67  AIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVF-----HTTR 121

Query: 95  TNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL 152
                      +  P ++    GR++N++S                              
Sbjct: 122 -----------LALPHMKKQGWGRIINIAS------------------------------ 140

Query: 153 MNEFVELAQDGSHTKGGWPN-SAYAATK---LGVTKLSFLQHALLSQDAIREDLVVNCVH 208
                       H      N SAY A K   +G+TK+  L+ A          +  N + 
Sbjct: 141 -----------VHGLVASANKSAYVAAKHGVVGLTKVVALETA-------GTGVTCNAIC 182

Query: 209 PGYVNTDM 216
           PG+V T +
Sbjct: 183 PGWVLTPL 190

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 50.9 bits (122), Expect = 9e-08
 Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 16/139 (11%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL------------DILD 48
           +TG++ GIG G    L  +    + LT RDA R +E  +   +             D+ +
Sbjct: 8   ITGSSSGIGAGTAI-LFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLTE 66

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDIL 107
           +     +     A+ G +D+LVNNA I  K    E    +     M  N  A+I +  + 
Sbjct: 67  EEGQDRIISTTLAKFGRLDILVNNAGILAK-GGGEDQDIEEYDKVMNLNLRAVIYLTKLA 125

Query: 108 FP-LLRSHGRVVNVSSSCG 125
            P L+++ G +VNVSS  G
Sbjct: 126 VPHLIKTKGEIVNVSSVAG 144

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 58/233 (24%), Positives = 87/233 (37%), Gaps = 67/233 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-------IIYLTARDA-----SRGQEALEKLQKLDILD 48
           VTG  +GIG GI + L +  DG       +   TA++        G +A     KLD+ D
Sbjct: 5   VTGGAQGIGKGIAERLAK--DGFAVAVADLNEETAKETAKEINQAGGKA--VAYKLDVSD 60

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTNYFAL---IDVC 104
           K+ + +  D    + GG DV+VNNA +A  +        + L  +   N   +   I   
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAA 119

Query: 105 DILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
              F      G+++N +S  GH                                      
Sbjct: 120 ARQFKKQGHGGKIINAASIAGHE------------------------------------- 142

Query: 165 HTKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               G P  SAY++TK  V  L+  Q A  +Q+   + + VN   PG V T M
Sbjct: 143 ----GNPILSAYSSTKFAVRGLT--QTA--AQELAPKGITVNAYCPGIVKTPM 187

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 30/142 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS--RGQEALEKL------QKLDILDKNSI 52
           +TGA+ GIG+ I K   +    I++         +G  A  +L         D+ D++ +
Sbjct: 15  ITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGV 74

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDVCDILFPLL 111
           +A+   +E E G +D+LVNNA I  ++          +  M    F  +ID+ D+  P +
Sbjct: 75  QAMVSQIEKEVGVIDILVNNAGIIKRI---------PMLEMSAEDFRQVIDI-DLNAPFI 124

Query: 112 -----------RSHGRVVNVSS 122
                      + HG+++N+ S
Sbjct: 125 VSKAVIPSMIKKGHGKIINICS 146

Length = 265

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.0 bits (123), Expect = 1e-07
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 27/91 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR--------GQEALEKLQK--------L 44
           VTGA +GIG  I + L           ARD +           EAL  +          L
Sbjct: 215 VTGAARGIGAAIAEVL-----------ARDGAHVVCLDVPAAGEALAAVANRVGGTALAL 263

Query: 45  DILDKNSIKALHDHLEAEHGGVDVLVNNAAI 75
           DI   ++   + +HL   HGG+D++V+NA I
Sbjct: 264 DITAPDAPARIAEHLAERHGGLDIVVHNAGI 294

Length = 450

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 11/92 (11%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
          +TGA   IG    K L+      + L   +A   ++  E+L           +LDI  K 
Sbjct: 7  ITGAAGLIGKAFCKALLSA-GARLILADINAPALEQLKEELTNLYKNRVIALELDITSKE 65

Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSS 82
          SIK L +    + G +D+L+NNA  + KV  S
Sbjct: 66 SIKELIESYLEKFGRIDILINNAYPSPKVWGS 97

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 19/137 (13%)

Query: 1   VTGANKGIGYGIVKGLIQQF--DG----IIYLTAR--DASRGQEALEK------LQKLDI 46
           +TG + GIG    + +   F  +G    I YL     DA   ++ +E+      L   D+
Sbjct: 31  ITGGDSGIG----RAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPGDL 86

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS-QALHTMRTNYFALIDVCD 105
            D++  + L   +  E G +D+LVNNAA      S E   + Q   T RTN F++  +  
Sbjct: 87  GDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFYLTK 146

Query: 106 ILFPLLRSHGRVVNVSS 122
              P L+    ++N +S
Sbjct: 147 AALPHLKKGSSIINTTS 163

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 53/233 (22%), Positives = 82/233 (35%), Gaps = 63/233 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-------------DIL 47
           +TG + G+G  I   L      +I L      RG+   + +                D+ 
Sbjct: 11  ITGGSGGLGRAIAVRLAADGADVIVLD-IHPMRGRAEADAVAAGIEAAGGKALGLAFDVR 69

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCD-I 106
           D  + +A  D    E G +D+LVNNA IA     +E    +    +  N     +V    
Sbjct: 70  DFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAA 129

Query: 107 LFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
           L P++R+   GR+VN++S  G                                       
Sbjct: 130 LPPMIRARRGGRIVNIASVAG------------------------------------VRG 153

Query: 165 HTKGGWPNSAYAATKLGVTKLS-FLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           +         YAA+K G+  L+  L + L  +  I     VN V PG +NT M
Sbjct: 154 NRGQV----NYAASKAGLIGLTKTLANELAPR-GIT----VNAVAPGAINTPM 197

Length = 249

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 23/133 (17%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG ++GIG  +V  L ++   +I    ++ S          K+D+ +K  +    D++ 
Sbjct: 11  VTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS---YNDVDYFKVDVSNKEQVIKGIDYVI 67

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTN-YFALIDV----------CDILFP 109
           +++G +D+LVNNA I       E +G+  +H +  + +  +I+V            I + 
Sbjct: 68  SKYGRIDILVNNAGI-------ESYGA--IHAVEEDEWDRIINVNVNGIFLMSKYTIPYM 118

Query: 110 LLRSHGRVVNVSS 122
           L +  G ++N++S
Sbjct: 119 LKQDKGVIINIAS 131

Length = 258

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 22/138 (15%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQ-------------KLDI 46
           +TGA+ GIG        +   G  + L AR     Q+ALE L               +D+
Sbjct: 11  ITGASSGIGKATALAFAKA--GWDLALVARS----QDALEALAAELRSTGVKAAAYSIDL 64

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
            +  +I      L  + G  DVL+NNA +A+     E   S     ++ N  ++   C  
Sbjct: 65  SNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSA 124

Query: 107 LFPLLRSH--GRVVNVSS 122
           + P +R+   G ++NVSS
Sbjct: 125 VLPGMRARGGGLIINVSS 142

Length = 241

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 45/233 (19%), Positives = 82/233 (35%), Gaps = 68/233 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRG------------QEALEKLQ------ 42
           VTGA++GIG  I   L +     + + A+ AS G            +E  E+++      
Sbjct: 8   VTGASRGIGRAIALRLAKA-GATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGGQA 66

Query: 43  ---KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFA 99
               +D+ D++ ++AL +    + G +D+LVNNA   +     +    +     R N   
Sbjct: 67  LPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQRVNLRG 126

Query: 100 LIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
              +     P +     G ++N+S          S                         
Sbjct: 127 TYLLSQAALPHMVKAGQGHILNISP-------PLSLRP---------------------- 157

Query: 158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPG 210
                         + AYAA K G+++L+      L+ +  R  + VN + P 
Sbjct: 158 -----------ARGDVAYAAGKAGMSRLT----LGLAAELRRHGIAVNSLWPS 195

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 9/130 (6%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           +TGA++G G    +  +++ D ++  TARD +   +  EK         LD+ D+ ++ A
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVV-ATARDTATLADLAEKYGDRLLPLALDVTDRAAVFA 66

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH 114
             +      G +D++VNNA         E   S+A   + TN+F  + V   + P LR  
Sbjct: 67  AVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ 126

Query: 115 --GRVVNVSS 122
             G ++ +SS
Sbjct: 127 RSGHIIQISS 136

Length = 275

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 14/134 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA +GIG G+ + L  +    + L  R      E L ++            D+     
Sbjct: 9   VTGAAQGIGRGVAERLAGE-GARVLLVDRSEL-VHEVLAEILAAGDAAHVHTADLETYAG 66

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFP- 109
            + +        G VDVL+NN          E +  + +   +R + F  +  C  + P 
Sbjct: 67  AQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCCRAVLPH 126

Query: 110 -LLRSHGRVVNVSS 122
            L R  G +VNVSS
Sbjct: 127 MLERQQGVIVNVSS 140

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 49.1 bits (117), Expect = 3e-07
 Identities = 55/229 (24%), Positives = 88/229 (38%), Gaps = 58/229 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA++GIG  I   L      I        S  +  +  +Q         + D+ D+ +
Sbjct: 3   VTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVA 62

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
            + L +   AEHG    +V NA I    AF   S E +    +HT    ++ +I  C + 
Sbjct: 63  CRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDI-VIHTNLDGFYNVIHPCTMP 121

Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
               R  GR++ ++S                          +S +M             +
Sbjct: 122 MIRARQGGRIITLAS--------------------------VSGVMG-----------NR 144

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           G    SA  A  +G TK      AL  + A R+ + VNC+ PG ++T+M
Sbjct: 145 GQVNYSAAKAGLIGATK------ALAVELAKRK-ITVNCIAPGLIDTEM 186

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 49.1 bits (117), Expect = 4e-07
 Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 67/247 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG ++GIG      L Q+   +     ++    QE +  + +          DI D+N 
Sbjct: 6   VTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQ 65

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS----QALHTMRTNYFALIDVC--D 105
           + A+   ++     +  LVNNA I F   + E   +    + L T  T YF    +C  +
Sbjct: 66  VVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYF----LCCRE 121

Query: 106 ILFPLLRSH----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQ 161
            +  +   H    G +VNVSS+   L                           E+V+   
Sbjct: 122 AVKRMALKHGGSGGAIVNVSSAASRL-----------------------GAPGEYVD--- 155

Query: 162 DGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM-SSGK 220
                        YAA+K  +  L+      LS +   + + VNCV PG++ T+M +SG 
Sbjct: 156 -------------YAASKGAIDTLT----TGLSLEVAAQGIRVNCVRPGFIYTEMHASGG 198

Query: 221 GPLTIDQ 227
            P  +D+
Sbjct: 199 EPGRVDR 205

Length = 247

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 2   TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDILDK 49
           TGA+ GIG  + + L      ++ L  R+A    E LE L               D+  +
Sbjct: 11  TGASGGIGQALAEALAAAGARLL-LVGRNA----EKLEALAARLPYPGRHRWVVADLTSE 65

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMR----TNYFALIDVCD 105
              +A+      E GG++VL+NNA     VN       Q    +      N  A + +  
Sbjct: 66  AGREAVLARAR-EMGGINVLINNAG----VNHFALLEDQDPEAIERLLALNLTAPMQLTR 120

Query: 106 ILFPLLR--SHGRVVNVSSSCG 125
            L PLLR      VVNV S+ G
Sbjct: 121 ALLPLLRAQPSAMVVNVGSTFG 142

Length = 263

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 15/138 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG ++G+G  I + L +    ++ L+AR A   +EA   L+ L         D+ D+  
Sbjct: 17  VTGGSRGLGLQIAEALGEAGARVV-LSARKAEELEEAAAHLEALGIDALWIAADVADEAD 75

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE-PFGSQALHTMRTN---YFALIDVCDIL 107
           I+ L +      G VD+LVNNA   +   + + P  +     M  N    F L       
Sbjct: 76  IERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWD-KVMNLNVRGLFLLSQAVAKR 134

Query: 108 FPLLRSHGRVVNVSSSCG 125
             + R +GR++NV+S  G
Sbjct: 135 SMIPRGYGRIINVASVAG 152

Length = 259

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 17/141 (12%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
           +TGA+ G G G+ + L+ + D +   T R      +AL+ L+           LD+ D  
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVA-ATVRRP----DALDDLKARYGDRLWVLQLDVTDSA 61

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           +++A+ D   A  G +DV+V+NA       + E   +Q    + TN    I V     P 
Sbjct: 62  AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPH 121

Query: 111 LRSH--GRVVNVSSSCGHLCH 129
           LR    GR+V VSS  G + +
Sbjct: 122 LRRQGGGRIVQVSSEGGQIAY 142

Length = 276

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL----------DILDKN 50
          +TG   GIG  I K   +     + +  R     + A E++             D+ D  
Sbjct: 8  ITGGGTGIGKAIAKAFAE-LGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCDVRDPE 66

Query: 51 SIKALHDHLEAEHGGVDVLVNNAA 74
          +++A  D    E G +D+L+NNAA
Sbjct: 67 AVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 48.7 bits (117), Expect = 9e-07
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 26/140 (18%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           VTGA  GIG    K L  +   ++ L   D    + A  +L           D+ D+ ++
Sbjct: 427 VTGAAGGIGKATAKRLAAEGACVV-LADLDEEAAEAAAAELGGPDRALGVACDVTDEAAV 485

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTN-------YFALIDVCD 105
           +A  +      GGVD++V+NA IA     S P    +    R +       +F +     
Sbjct: 486 QAAFEEAALAFGGVDIVVSNAGIA----ISGPIEETSDEDWRRSFDVNATGHFLVAREA- 540

Query: 106 ILFPLLRSH---GRVVNVSS 122
               ++++    G +V ++S
Sbjct: 541 --VRIMKAQGLGGSIVFIAS 558

Length = 681

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
          VTG+++GIG  I   L ++   I    AR     +E  E+++ L         ++ D   
Sbjct: 9  VTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEK 68

Query: 52 IKALHDHLEAEHGGVDVLVNNAA 74
          IK +   ++ E G +DV VNNAA
Sbjct: 69 IKEMFAQIDEEFGRLDVFVNNAA 91

Length = 250

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 22/139 (15%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------------LDIL 47
           +TGA+ GIG    +   ++   ++ +     +R ++ L+ +                D+ 
Sbjct: 45  LTGASSGIGEAAAEQFARRGATVVAV-----ARREDLLDAVADRITRAGGDAMAVPCDLS 99

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAA--IAFKVNSSEPFGSQALHTMRTNYFALIDVCD 105
           D +++ AL   +E   GGVD+L+NNA   I   +  S         TM  NY+A + +  
Sbjct: 100 DLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIR 159

Query: 106 ILFP--LLRSHGRVVNVSS 122
            L P  L R  G ++NV++
Sbjct: 160 GLAPGMLERGDGHIINVAT 178

Length = 293

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 53/231 (22%), Positives = 82/231 (35%), Gaps = 65/231 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           VTGA  GIG    K   ++    + +  RDA   +     +         + D+    ++
Sbjct: 10  VTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAV 68

Query: 53  KALHDHLEAEHGGVDVLVNNA--AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           +AL D + A  G +DVLVNNA       V +++     A+  MR N   +        P+
Sbjct: 69  EALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAV--MRVNVGGVFLWAKYAIPI 126

Query: 111 LRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           ++    G +VN +S                                             G
Sbjct: 127 MQRQGGGSIVNTASQ----------------------------------------LALAG 146

Query: 169 GWPNSAYAATKLGVTKLS---FLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           G   +AY A+K  +  L+    L HA    D IR    VN V PG ++T  
Sbjct: 147 GRGRAAYVASKGAIASLTRAMALDHA---TDGIR----VNAVAPGTIDTPY 190

Length = 252

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--KLDILDKNSIKALHDH 58
          VTG + GIG  IVK L+    G   + A D   G    E  Q    D+     +      
Sbjct: 14 VTGGSSGIGLAIVKELLAN--GANVVNA-DIHGGDGQHENYQFVPTDVSSAEEVNHTVAE 70

Query: 59 LEAEHGGVDVLVNNAAI 75
          +  + G +D LVNNA I
Sbjct: 71 IIEKFGRIDGLVNNAGI 87

Length = 266

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 31/143 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTGA KGIG   VK L +    ++ +     SR Q  L+ L +         +D+ D ++
Sbjct: 12  VTGAGKGIGRATVKALAKAGARVVAV-----SRTQADLDSLVRECPGIEPVCVDLSDWDA 66

Query: 52  I-KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS---QAL-HTMRTNYFALIDVCDI 106
             +AL        G VD+LVNNAA+A      +PF     +A   +   N  A+I V  I
Sbjct: 67  TEEAL-----GSVGPVDLLVNNAAVAI----LQPFLEVTKEAFDRSFDVNVRAVIHVSQI 117

Query: 107 LFPLLRSH---GRVVNVSSSCGH 126
           +   + +    G +VNVSS    
Sbjct: 118 VARGMIARGVPGSIVNVSSQASQ 140

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 15/139 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL--------DILDKNSI 52
           VTG ++GIG  I +G ++     + ++AR A    +A E+L           D+  +  I
Sbjct: 11  VTGGSRGIGRMIAQGFLEA-GARVIISARKAEACADAAEELSAYGECIAIPADLSSEEGI 69

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR 112
           +AL   +      +DVLVNNA   +         S     M  N  ++  +   L PLLR
Sbjct: 70  EALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQALLPLLR 129

Query: 113 SHG------RVVNVSSSCG 125
           +        RV+N+ S  G
Sbjct: 130 AAATAENPARVINIGSIAG 148

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)

Query: 1  VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQKL---------DILDKN 50
          VTGA++GIG  I   L  + FD  I     D  +  E + ++            DI + +
Sbjct: 6  VTGASRGIGRAIATELAARGFDIAIN-DLPDDDQATEVVAEVLAAGRRAIYFQADIGELS 64

Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKV 79
            +AL D    + G +D LVNNA IA + 
Sbjct: 65 DHEALLDQAWEDFGRLDCLVNNAGIAVRP 93

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 66/235 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
           VTGA  GIG  I + L ++  G+ +++ AR        +++L++          D+    
Sbjct: 8   VTGATSGIGLAIARRLGKE--GLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSVP 65

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
            I+AL     A +G +DVLVNNA  +    ++E      L  + TN   +  V   +   
Sbjct: 66  EIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVLKA 125

Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
              L R  GR++N++S+ G          K+ ++H                         
Sbjct: 126 GGMLERGTGRIINIASTGG----------KQGVVHA------------------------ 151

Query: 167 KGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y+A+K GV   TK   L+ A       R  + VN V PG+V T M++
Sbjct: 152 ------APYSASKHGVVGFTKALGLELA-------RTGITVNAVCPGFVETPMAA 193

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 60/234 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           +TG + G+G  +     ++   ++     D     +  E+++K          D+  ++ 
Sbjct: 12  ITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESD 71

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           +  L      E G +DV++NNA I   V S         H M                 L
Sbjct: 72  VVNLIQTAVKEFGTLDVMINNAGIENAVPS---------HEMS----------------L 106

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK-SVEELSALMNEFVELAQDGSHTKGGW 170
               +V+N + +   L   + EA+K  + H+IK ++  +S++            H +  W
Sbjct: 107 EDWNKVINTNLTGAFLG--SREAIKYFVEHDIKGNIINMSSV------------HEQIPW 152

Query: 171 PNSA-YAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
           P    YAA+K GV   T+   +++A      IR    VN + PG +NT +++ K
Sbjct: 153 PLFVHYAASKGGVKLMTETLAMEYA---PKGIR----VNNIGPGAINTPINAEK 199

Length = 261

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 15/135 (11%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG+++GIG    K L      ++    + A R  + + +++           D+ D+ S
Sbjct: 11  VTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEES 70

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           + AL D    E GG+D LV NA+   +    E       + MR N  A  ++     PL+
Sbjct: 71  VAALMDTAREEFGGLDALVLNASGGMESGMDED------YAMRLNRDAQRNLARAALPLM 124

Query: 112 RSHGRVVNVSSSCGH 126
            +  RVV V+S   H
Sbjct: 125 PAGSRVVFVTSHQAH 139

Length = 248

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 55/234 (23%), Positives = 90/234 (38%), Gaps = 72/234 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           +TGA  GIG  + +  + +    + +     +R + A  ++        LD+  ++SI  
Sbjct: 11  LTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDR 69

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNY---FALIDVCDILFPLL 111
           +        GG+D+L NNAA+ F +    P     L   R +Y   FA ++V  + F + 
Sbjct: 70  IVAAAVERFGGIDILFNNAAL-FDM---API----LDISRDSYDRLFA-VNVKGLFFLMQ 120

Query: 112 --------RSHG-RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
                   +  G +++N++S  G       EAL                           
Sbjct: 121 AVARHMVEQGRGGKIINMASQAGR----RGEALV-------------------------- 150

Query: 163 GSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                     S Y ATK  V  +S+ Q A L    IR  + VN + PG V+T M
Sbjct: 151 ----------SHYCATKAAV--ISYTQSAAL--ALIRHGINVNAIAPGVVDTPM 190

Length = 257

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 21/137 (15%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           VTG   GIG  I K L  +   ++     D    ++  E  Q        + D+  +  +
Sbjct: 6   VTGGASGIGLAIAKRLAAEGAAVVVADI-DPEIAEKVAEAAQGGPRALGVQCDVTSEAQV 64

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNY----FALIDVCDILF 108
           ++  +    E GG+D++V+NA IA    +S P    +L     +          V    F
Sbjct: 65  QSAFEQAVLEFGGLDIVVSNAGIA----TSSPIAETSLEDWNRSMDINLTGHFLVSREAF 120

Query: 109 PLLRSHGR----VVNVS 121
            +++S G     V N S
Sbjct: 121 RIMKSQGIGGNIVFNAS 137

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 1  VTGANKGIGYGIVKGLIQQ------FDGIIYLTARDASRGQEALEKLQ--KLDILDKNSI 52
          VTGA +GIGY + + L +        D          +  +         KLD+ D  ++
Sbjct: 3  VTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSAAV 62

Query: 53 KALHDHLEAEHGGVDVLVNNAAI 75
            +   LE E+G +DVLVN A I
Sbjct: 63 DEVVQRLEREYGPIDVLVNVAGI 85

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 54/224 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFD--GIIYLTA-RDASRGQEALEK------LQKLDILDKNS 51
           +TG + GIG  +     ++     I+YL    DA+  ++ +EK      L   D+ D+  
Sbjct: 51  ITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAF 110

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPL 110
            K   +    E G +D+LVNNAA  +   S E   ++ L  T +TN ++   +     P 
Sbjct: 111 CKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPH 170

Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           L+    ++N  S       +T     + L+                     D S TKG  
Sbjct: 171 LKQGSAIINTGS-------ITGYEGNETLI---------------------DYSATKGA- 201

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
               +A T+      S  Q   L Q  IR    VN V PG + T
Sbjct: 202 ---IHAFTR------SLAQS--LVQKGIR----VNAVAPGPIWT 230

Length = 290

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 48/227 (21%), Positives = 74/227 (32%), Gaps = 56/227 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ--EALEKLQKL----DILDKNSIKA 54
           VTG   GIG  I +   +    +      +A+       L   +      D+ D   ++ 
Sbjct: 16  VTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVER 75

Query: 55  LHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           + D      GG+DVLVNNA IA     ++   P   Q   T+  N            PLL
Sbjct: 76  VFDTAVERFGGLDVLVNNAGIAGPTGGIDEITP--EQWEQTLAVNLNGQFYFARAAVPLL 133

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           ++       S   G +  ++S A +                                G  
Sbjct: 134 KA-------SGHGGVIIALSSVAGRLGY----------------------------PGR- 157

Query: 172 NSAYAATKLGVTKLSFLQHAL--LSQDAIREDLVVNCVHPGYVNTDM 216
            + YAA+K  V  +  ++     L    IR    VN + PG V    
Sbjct: 158 -TPYAASKWAV--VGLVKSLAIELGPLGIR----VNAILPGIVRGPR 197

Length = 264

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 49/234 (20%), Positives = 77/234 (32%), Gaps = 72/234 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL-------EKLQKLDILDKNSIK 53
           +TG   G+G      L  +   +  L  R A+   + L        ++  +D++D  + +
Sbjct: 12  ITGGFGGLGRATAAWLAARGARVA-LIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAAR 70

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAF---KVNSSEP------FGSQALHTMRTNYFALIDVC 104
              D +  + G +D LVN A  AF    +   +       +G     T+  +  AL    
Sbjct: 71  RAVDEVNRQFGRLDALVNIAG-AFVWGTIADGDADTWDRMYGVNVKTTLNASKAAL---- 125

Query: 105 DILFP-LLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
               P L  S  GR+VN+ +                                        
Sbjct: 126 ----PALTASGGGRIVNIGAGAA------------------------------------- 144

Query: 163 GSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               K G    AYAA K GV +L+    A L    I     VN V P  ++T  
Sbjct: 145 ---LKAGPGMGAYAAAKAGVARLTEALAAELLDRGIT----VNAVLPSIIDTPP 191

Length = 239

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 30/142 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----------QKLDILDK 49
           +TGAN GIG    + L ++    + +  RD ++ +EA  ++           + LD+   
Sbjct: 6   ITGANTGIGKETARELARR-GARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLASL 64

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAF------KVNSSEPFGSQAL-HTMRTNYFALID 102
            SI+A      AE   +DVL+NNA +        +      FG   L H + TN      
Sbjct: 65  KSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTN------ 118

Query: 103 VCDILFPLLRSHG--RVVNVSS 122
              +L  LL+     R+VNVSS
Sbjct: 119 ---LLLDLLKKSAPSRIVNVSS 137

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 27/136 (19%), Positives = 60/136 (44%), Gaps = 14/136 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTGA++G+G  I +   ++   ++    R     +    +        + D+ D++ ++A
Sbjct: 5   VTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDRDQVQA 64

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVN--SSEPFGSQALHTMRTNY-FAL---IDVCDILF 108
           + +  +   G VD +VNNA I F  +    + F +      +     A+   +++   + 
Sbjct: 65  MIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNLLQAVL 124

Query: 109 PLLR--SHGRVVNVSS 122
           P  +    GRV+N+ +
Sbjct: 125 PDFKERGSGRVINIGT 140

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 53/235 (22%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASR--GQEALEKLQ--KLDILDKNSIKAL 55
           + GA++G+G G+V  L++   G  +  T R   +    +AL  +   KLD+ D  S+  L
Sbjct: 6   IIGASRGLGLGLVDRLLE--RGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQL 63

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVNSS--EPFGSQALHTMRTNYFALIDVCDILFPLLR- 112
              L+ +    D+L  NA I+   + S  +   ++      TN  A I +   L   +R 
Sbjct: 64  LQRLQGQR--FDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP 121

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
             G +  +SS  G +     +  +  L    K+   L+++   FV               
Sbjct: 122 GQGVLAFMSSQLGSVEL--PDGGEMPLYKASKAA--LNSMTRSFV--------------- 162

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
                 +LG   L+ L                  +HPG+V TDM     PL ++ 
Sbjct: 163 -----AELGEPTLTVLS-----------------MHPGWVKTDMGGDNAPLDVET 195

Length = 225

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 20/88 (22%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKN---------- 50
          VTGA++GIG  I K L QQ   +I      +SR  +  + +    I+             
Sbjct: 13 VTGASRGIGEAIAKLLAQQGAHVIV-----SSRKLDGCQAVAD-AIVAAGGKAEALACHI 66

Query: 51 ----SIKALHDHLEAEHGGVDVLVNNAA 74
               I AL  H+   HG +D+LVNNAA
Sbjct: 67 GEMEQIDALFAHIRERHGRLDILVNNAA 94

Length = 252

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 45.6 bits (108), Expect = 5e-06
 Identities = 56/242 (23%), Positives = 87/242 (35%), Gaps = 65/242 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL----------DILDKN 50
           VTG ++GIG GIV+  ++    +++  AR  + GQ    +L +           D+  + 
Sbjct: 14  VTGGSRGIGRGIVRAFVENGAKVVF-CARGEAAGQALESELNRAGPGSCKFVPCDVTKEE 72

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAI-----AFKVNSSEPFGSQALHTMRTNYFALIDVCD 105
            IK L        G +D LVNNA            S++ F    L+    +YF       
Sbjct: 73  DIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEF-RDLLNLNLISYFLA---SK 128

Query: 106 ILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
              P LR S G ++N+SS  G +                                     
Sbjct: 129 YALPHLRKSQGNIINLSSLVGSI------------------------------------- 151

Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLT 224
              G    + Y ATK  +T ++      L+ D  R  + VNC+ PG + T +       T
Sbjct: 152 ---GQKQAAPYVATKGAITAMT----KALAVDESRYGVRVNCISPGNIWTPLWEELAAQT 204

Query: 225 ID 226
            D
Sbjct: 205 PD 206

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 21/110 (19%)

Query: 31  ASRGQEALEKLQK-------------LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF 77
           A+R  E L+++                DI D++    L        G VD LVNN   AF
Sbjct: 35  AARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNN---AF 91

Query: 78  KVNSSEPFGSQALHTMR----TNYFALIDVCDILFPLL-RSHGRVVNVSS 122
           +V S +P         R     N    + +     P L  S G +V ++S
Sbjct: 92  RVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141

Length = 258

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 45.5 bits (108), Expect = 6e-06
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 11/84 (13%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
          +TGA+ GIG      L Q+  G   L    A    E ++K++          +DI D+  
Sbjct: 11 ITGASTGIGQASAIALAQE--GAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQ 68

Query: 52 IKALHDHLEAEHGGVDVLVNNAAI 75
          +K     ++ + G VDVL NNA +
Sbjct: 69 VKDFASEIKEQFGRVDVLFNNAGV 92

Length = 272

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 7e-06
 Identities = 57/237 (24%), Positives = 81/237 (34%), Gaps = 60/237 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIK 53
           + GA++GIG   V+        +I  TARD      AL  LQ        LD+ D  S+ 
Sbjct: 6   IVGASRGIGREFVRQYRADGWRVI-ATARD----AAALAALQALGAEALALDVADPASVA 60

Query: 54  ALHDHLEAEHGGVDVLVNNAAI-AFKVNSSEPFGSQAL-HTMRTNYFALIDVCDILFPLL 111
            L   L+ E   +D  V  A +   +    EP   +     M TN    + +  IL PL+
Sbjct: 61  GLAWKLDGEA--LDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLV 118

Query: 112 RSHGRVVNV-SSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
            + G V+ V SS  G +   T                                     GW
Sbjct: 119 EAAGGVLAVLSSRMGSIGDATGT----------------------------------TGW 144

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
               Y A+K  +           S  A     +   +HPG+V TDM   +  L   Q
Sbjct: 145 ---LYRASKAALNDAL----RAASLQARHATCIA--LHPGWVRTDMGGAQAALDPAQ 192

Length = 222

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 45.6 bits (108), Expect = 7e-06
 Identities = 53/240 (22%), Positives = 88/240 (36%), Gaps = 57/240 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGII--YLTA--RDASRGQEALEKLQKL------DILDKN 50
           +TGA+ GIG        ++   I   YL    +DA+   + ++   +       D+ D+ 
Sbjct: 60  ITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEA 119

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDILFP 109
             + L +    E GG+D+LVN A     V       ++    T +TN +A+  +C    P
Sbjct: 120 FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIP 179

Query: 110 LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
            L     ++N  S                    I+S +    L++               
Sbjct: 180 HLPPGASIINTGS--------------------IQSYQPSPTLLD--------------- 204

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM--SSGKGPLTIDQ 227
                YA+TK  +   +    AL  Q    + + VN V PG V T +  S G+ P  I  
Sbjct: 205 -----YASTKAAIVAFT---KALAKQ-VAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPD 255

Length = 300

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 16/138 (11%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-----------GQEALEKLQKLDILDK 49
           +TGA++GIG  +   L +     + L AR+ +R           G EAL  +   D+ D 
Sbjct: 6   ITGASEGIGRALAVRLARA-GAQLVLAARNETRLASLAQELADHGGEAL--VVPTDVSDA 62

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILF 108
            + + L +   A  GG+D+LVNNA I       E          MR NY   +       
Sbjct: 63  EACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAAL 122

Query: 109 P-LLRSHGRVVNVSSSCG 125
           P L  S G++V VSS  G
Sbjct: 123 PHLKASRGQIVVVSSLAG 140

Length = 263

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 45.1 bits (107), Expect = 9e-06
 Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 10/82 (12%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
          +TG    +G  + + L Q     +    R+  +G +  +++  L         D+LD+ S
Sbjct: 10 ITGGTGVLGGAMARALAQA-GAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLDRAS 68

Query: 52 IKALHDHLEAEHGGVDVLVNNA 73
          ++   + + A+ G VD+L+N A
Sbjct: 69 LERAREEIVAQFGTVDILINGA 90

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 9e-06
 Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 26/151 (17%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           VTGA+ GIG      L Q+   ++      A+R   AL++L         +LD+ D  +I
Sbjct: 14  VTGASSGIGRACAVALAQRGARVV-----AAARNAAALDRLAGETGCEPLRLDVGDDAAI 68

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR 112
           +A      A  G  D LVN A IA   ++ +         M  N      V   +   + 
Sbjct: 69  RAAL----AAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMI 124

Query: 113 SHGR---VVNVSSSCG------HLCHVTSEA 134
           + GR   +VNVSS         HL +  S+A
Sbjct: 125 AAGRGGSIVNVSSQAALVGLPDHLAYCASKA 155

Length = 245

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 9e-06
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYL--TARDASRGQEALEKLQKLDILDKNSIKALHDH 58
          VTG  +GIG GI +  +     ++     A +   G+ A  +    D+ D + + AL D 
Sbjct: 11 VTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPA--EFHAADVRDPDQVAALVDA 68

Query: 59 LEAEHGGVDVLVNNA 73
          +   HG +DVLVNNA
Sbjct: 69 IVERHGRLDVLVNNA 83

Length = 252

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 59/237 (24%), Positives = 89/237 (37%), Gaps = 70/237 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARD---------ASRGQEALEKLQKLDILDKNS 51
           +TGA +GIG GI +   +    +I L               RG          D+ D  S
Sbjct: 11  ITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTA--VVADVRDPAS 68

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
           + A     + + G +D+LVNNA +     F   S E    +  H +  N   + +V   +
Sbjct: 69  VAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDE---DRDFH-IDINIKGVWNVTKAV 124

Query: 108 FP--LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
            P  + R  GR+V +SS  G +                               +A  G  
Sbjct: 125 LPEMIARKDGRIVMMSSVTGDM-------------------------------VADPGE- 152

Query: 166 TKGGWPNSAYAATK---LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                  +AYA TK   +G+TK   +++A   Q  IR    VN + PGYV T M+  
Sbjct: 153 -------TAYALTKAAIVGLTKSLAVEYA---QSGIR----VNAICPGYVRTPMAES 195

Length = 263

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 54/230 (23%), Positives = 87/230 (37%), Gaps = 62/230 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA+ GIG    + L  +    + + AR   R +   ++L+         +LD+ D+  
Sbjct: 8   VTGASSGIGEATARALAAE-GAAVAIAARRVDRLEALADELEAEGGKALVLELDVTDEQQ 66

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
           + A  +      G +D+LVNNA I     V  ++   +     + TN   L+       P
Sbjct: 67  VDAAVERTVEALGRLDILVNNAGIMLLGPVEDADT--TDWTRMIDTNLLGLMYTTHAALP 124

Query: 110 --LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
             LLR+ G +VN+SS  G                                         +
Sbjct: 125 HHLLRNKGTIVNISSVAG-----------------------------------------R 143

Query: 168 GGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               NSA Y ATK GV   S      +++  +R    V  + PG V+T++
Sbjct: 144 VAVRNSAVYNATKFGVNAFSEGLRQEVTERGVR----VVVIEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 54/229 (23%), Positives = 80/229 (34%), Gaps = 53/229 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA  GIG  I  GL Q    +     R      E  E ++           D+  K  
Sbjct: 13  VTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKAD 72

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           ++A     EAE G + + VN A IA    + E    Q    M  N   +   C      +
Sbjct: 73  LRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAM 132

Query: 112 RSHGR--VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
             +G   +VN++S  G + +                             L Q  +H    
Sbjct: 133 LENGGGSIVNIASMSGIIVN---------------------------RGLLQ--AH---- 159

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                Y A+K GV  LS      L+ + +   + VN + PGY  T M++
Sbjct: 160 -----YNASKAGVIHLS----KSLAMEWVGRGIRVNSISPGYTATPMNT 199

Length = 254

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 59/225 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKA 54
           VTGA +GIG GI   LI +   ++ L   D  RG +  + L +      +D+ D+  + A
Sbjct: 15  VTGAARGIGLGIAAWLIAEGWQVV-LADLDRERGSKVAKALGENAWFIAMDVADEAQVAA 73

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFPL 110
               +  + G +D LV NAAIA   N+     S +L      +  N    + +     P 
Sbjct: 74  GVAEVLGQFGRLDALVCNAAIADPHNT--TLESLSLAHWNRVLAVNLTGPMLLAKHCAPY 131

Query: 111 LRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           LR+H G +VN++S+        +E                                    
Sbjct: 132 LRAHNGAIVNLASTRARQSEPDTE------------------------------------ 155

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
               AYAA+K G+  L+   HAL    ++  ++ VN V PG+++ 
Sbjct: 156 ----AYAASKGGLLALT---HALAI--SLGPEIRVNAVSPGWIDA 191

Length = 255

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 28/145 (19%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKAL---HD 57
           VTGA  GIG    + L ++   +I +     SR QE L+ + K +I +K  ++      D
Sbjct: 6   VTGATDGIGKAYAEELAKRGFNVILI-----SRTQEKLDAVAK-EIEEKYGVETKTIAAD 59

Query: 58  ---------HLEAEHGGVDV--LVNNAAIAFKVNSSEPF----GSQALHTMRTNYFALID 102
                     +E E  G+D+  LVNN  I+   +  E F      +    +  N  A + 
Sbjct: 60  FSAGDDIYERIEKELEGLDIGILVNNVGISH--SIPEYFLETPEDELQDIINVNVMATLK 117

Query: 103 VCDILFP--LLRSHGRVVNVSSSCG 125
           +  ++ P  + R  G +VN+SS  G
Sbjct: 118 MTRLILPGMVKRKKGAIVNISSFAG 142

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 61/236 (25%), Positives = 90/236 (38%), Gaps = 72/236 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
           VTGA  GIG      L  Q    ++LT RDA    + +   +           LDI D +
Sbjct: 5   VTGAASGIGRATALRLAAQ-GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD 63

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMR-------TNYFALIDV 103
           ++ A    + A HG +DV++N A I+        +G+    T          N    I V
Sbjct: 64  AVAAFAADIHAAHGSMDVVMNIAGISA-------WGTVDRLTHEQWRRMVDVNLMGPIHV 116

Query: 104 CDILFPLLRSHGR---VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
            +   P + + GR   +VNVSS+ G                       L AL        
Sbjct: 117 IETFVPPMVAAGRGGHLVNVSSAAG-----------------------LVAL-------- 145

Query: 161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                    W ++AY+A+K G+  LS     +L  D  R  + V+ V PG V T +
Sbjct: 146 --------PW-HAAYSASKFGLRGLS----EVLRFDLARHGIGVSVVVPGAVKTPL 188

Length = 272

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 48/186 (25%), Positives = 64/186 (34%), Gaps = 63/186 (33%)

Query: 42  QKLDILDKNSI-KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRT---N 96
             LD+ D+ +   AL D   A  G +DVL NNA I        PF    L    R    N
Sbjct: 53  GALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILR----GGPFEDIPLEAHDRVIDIN 108

Query: 97  YFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN 154
              +++      P L+     RV+N SS+                          SA+  
Sbjct: 109 VKGVLNGAHAALPYLKATPGARVINTSSA--------------------------SAIY- 141

Query: 155 EFVELAQDGSHTKGGWPNSA-YAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPG 210
                         G P  A Y+ATK  V  L+    AL     +  IR    V  V P 
Sbjct: 142 --------------GQPGLAVYSATKFAVRGLT---EALDLEWRRHGIR----VADVMPL 180

Query: 211 YVNTDM 216
           +V+T M
Sbjct: 181 FVDTAM 186

Length = 260

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 13/134 (9%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTAR---DASRGQ-EALEKLQKLDILDKNSIKAL 55
           +TG + GIG    + L  Q DG  ++ T R   D +  + E LE  Q LD  +  SI AL
Sbjct: 9   ITGCSSGIGAYCARAL--QSDGWRVFATCRKEEDVAALEAEGLEAFQ-LDYAEPESIAAL 65

Query: 56  HDH-LEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFPLLRS 113
               LE   G +D L NN A   +  + E   ++AL      N+F   D+   + P++R 
Sbjct: 66  VAQVLELSGGRLDALFNNGAYG-QPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK 124

Query: 114 --HGRVVNVSSSCG 125
              GR+V  SS  G
Sbjct: 125 QGQGRIVQCSSILG 138

Length = 277

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 51/239 (21%), Positives = 87/239 (36%), Gaps = 69/239 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------------KLDI 46
           VTGA+ GIG  + + L+Q    ++       +R  + +E L               + D+
Sbjct: 11  VTGASVGIGAAVARALVQHGMKVVGC-----ARRVDKIEALAAECQSAGYPTLFPYQCDL 65

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
            ++  I ++   +  +H GVDV +NNA +A      EP  S      +     + D    
Sbjct: 66  SNEEQILSMFSAIRTQHQGVDVCINNAGLARP----EPLLSGKTEGWKE----MFD---- 113

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
                      VNV +    +C  T EA +   + E    +     +N     +  G   
Sbjct: 114 -----------VNVLALS--IC--TREAYQS--MKERNVDDGHIININ-----SMSGHRV 151

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDL-------VVNCVHPGYVNTDMSS 218
                   YAATK  VT L+         + +R++L           + PG V T+ + 
Sbjct: 152 PPVSVFHFYAATKHAVTALT---------EGLRQELREAKTHIRATSISPGLVETEFAF 201

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 27/143 (18%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGII--YLTARDASR------GQEALEKLQKLDILDKNSI 52
           VTG ++G+G  I +   ++   ++  Y  + DA+       G  A+  LQ  D+ D+  +
Sbjct: 10  VTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAI-ALQA-DVTDREQV 67

Query: 53  KALHDHLEAEHG-GVDVLVNNAAIAFKVN----------SSEPFGSQALHTMRTNYFALI 101
           +A+        G  +  +VNNA   F  +          + E F  Q   +++      +
Sbjct: 68  QAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVK----GAL 123

Query: 102 DVCDILFPLLRSH--GRVVNVSS 122
           +      P +R    GR++N+ +
Sbjct: 124 NTIQAALPGMREQGFGRIINIGT 146

Length = 253

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
          VTGA  G G GI +   Q+   ++ +   +A   +     +       + D+  +  ++A
Sbjct: 10 VTGAGSGFGEGIARRFAQEGARVV-IADINADGAERVAADIGEAAIAIQADVTKRADVEA 68

Query: 55 LHDHLEAEHGGVDVLVNNAAIAFK 78
          + +   ++ G +D+LVNNA I  +
Sbjct: 69 MVEAALSKFGRLDILVNNAGITHR 92

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 18/89 (20%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------------KLDIL 47
          VTGA+ G+G    + L Q    ++      ASR  E L++L+              LD+ 
Sbjct: 14 VTGASSGLGARFAQVLAQAGAKVVL-----ASRRVERLKELRAEIEAEGGAAHVVSLDVT 68

Query: 48 DKNSIKALHDHLEAEHGGVDVLVNNAAIA 76
          D  SIKA   H E E G +D+LVNN+ ++
Sbjct: 69 DYQSIKAAVAHAETEAGTIDILVNNSGVS 97

Length = 258

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 33/140 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----------QKLDILDKN 50
           +TGA+KGIG    +    +   +  L ARDA   +     L            LD+    
Sbjct: 12  ITGASKGIGAAAAEAFAAEGCHLH-LVARDADALEALAADLRAAHGVDVAVHALDLSSPE 70

Query: 51  SIKALHDHLEAEHGGVDVLVNNA-AIAFKVNSSEPFGSQALHTMRT-------NYFALID 102
           + + L     AE G +D+LVNNA AI        P G                  F  ID
Sbjct: 71  AREQLA----AEAGDIDILVNNAGAI--------PGGGLDDVDDAAWRAGWELKVFGYID 118

Query: 103 VCDILFPLLRS--HGRVVNV 120
           +  + +P +++   G +VNV
Sbjct: 119 LTRLAYPRMKARGSGVIVNV 138

Length = 259

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 41/150 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------------LDIL 47
           VTGA  GIG    + L ++   ++      A    E  E++ K             +D+ 
Sbjct: 11  VTGAAGGIGQAYAEALAREGASVVV-----ADINAEGAERVAKQIVADGGTAIAVQVDVS 65

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT------------MRT 95
           D +S KA+ D   +  GG+D LVNNAAI         +G   L              M  
Sbjct: 66  DPDSAKAMADATVSAFGGIDYLVNNAAI---------YGGMKLDLLITVPWDYYKKFMSV 116

Query: 96  NYFALIDVCDILFPLL--RSHGRVVNVSSS 123
           N    +     ++  +  R  G +VN SS+
Sbjct: 117 NLDGALVCTRAVYKHMAKRGGGAIVNQSST 146

Length = 250

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 23/144 (15%)

Query: 1   VTGANKGIGYGIVKGLI----QQFDGIIYLTARDASRGQEALE----------KLQKLDI 46
           +TG + GIG  +   L     ++F   +Y T RD  +     E          +  +LD+
Sbjct: 5   ITGCSSGIGLHLAVRLASDPSKRFK--VYATMRDLKKKGRLWEAAGALAGGTLETLQLDV 62

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCD 105
            D  S+ A  + +   H  VDVLV NA +   +   E     A+ +    N F  + +  
Sbjct: 63  CDSKSVAAAVERVTERH--VDVLVCNAGVGL-LGPLEALSEDAMASVFDVNVFGTVRMLQ 119

Query: 106 ILFPLLRSH--GRVVNVSSSCGHL 127
              P ++    GR++ V+SS G L
Sbjct: 120 AFLPDMKRRGSGRIL-VTSSVGGL 142

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 38/128 (29%), Positives = 51/128 (39%), Gaps = 14/128 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTGA KGIG  +   L      +I + AR A        +L   D+ D     A    + 
Sbjct: 8   VTGATKGIGLALSLRLANLGHQVIGI-ARSAIDDFPG--ELFACDLADIEQTAATLAQI- 63

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRT----NYFALIDVCDILFP--LLRSH 114
            E   VD +VNN  IA      +P G   L  ++     N  A + V         LR  
Sbjct: 64  NEIHPVDAIVNNVGIA----LPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQ 119

Query: 115 GRVVNVSS 122
           GR+VN+ S
Sbjct: 120 GRIVNICS 127

Length = 234

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 25/136 (18%), Positives = 56/136 (41%), Gaps = 13/136 (9%)

Query: 6   KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHD 57
             I + I K   ++   ++ LT    +    A+++L K        LD+     I  L +
Sbjct: 6   NSIAWAIAKAAAEEGAEVV-LTTWPPALRMGAVDELAKELPADVIPLDVTSDEDIDELFE 64

Query: 58  HLEAEHGGVDVLVNNAAIAFKVNSSEPFG----SQALHTMRTNYFALIDVCDILFPLLRS 113
            ++ + G +D LV++ A++ ++   +P+        L  +  + ++ I +     PL+  
Sbjct: 65  KVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKPLMNE 124

Query: 114 HGRVVNVSSSCGHLCH 129
            G +V +S        
Sbjct: 125 GGSIVALSYIAAERVF 140

Length = 239

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGII-YLTAR-DASRGQEALEKLQ------KLDILDKNS 51
           VTGA K IG  I + L  + +  ++ Y  +  +A R ++ L  L+      + D+ D  +
Sbjct: 5   VTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLSDFAA 64

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM 93
              L        G  DVLVNNA+ AF           A   +
Sbjct: 65  CADLVAAAFRAFGRCDVLVNNAS-AFYPTPLGQGSEDAWAEL 105

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 11/128 (8%)

Query: 5   NKGIGYGIVKGLIQQFDGIIYLTARDASR------GQE-ALEKLQKLDILDKNSIKALHD 57
           NK I YGI K   +Q   + +    +A +       QE   + + +LD+      K+L +
Sbjct: 16  NKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAE 75

Query: 58  HLEAEHGGVDVLVNNAAIAFKVNSSEPF---GSQALHT-MRTNYFALIDVCDILFPLLRS 113
            L+ + G +D +V++ A A K      F     +A +  M  + ++LI++   L PLL  
Sbjct: 76  SLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND 135

Query: 114 HGRVVNVS 121
              V+ +S
Sbjct: 136 GASVLTLS 143

Length = 274

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 18/141 (12%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNS 51
           +TGA+ G+G    K L ++ +  + +  RD  + ++A +++            D+   +S
Sbjct: 6   ITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLASLDS 65

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTN---YFALIDVCDIL 107
           ++   D+       +D LV NAA+         F +     T+  N   +F L ++  +L
Sbjct: 66  VRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTNL--LL 123

Query: 108 FPLLRS---HGRVVNVSSSCG 125
             L RS     R+V V S   
Sbjct: 124 EDLQRSENASPRIVIVGSITH 144

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 42.8 bits (101), Expect = 5e-05
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 17/93 (18%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGI----IYLTARDASRGQEALEKLQK------------- 43
          VTGAN G+G  I + L+ + D      + L  R+  R + A   L               
Sbjct: 6  VTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDYVL 65

Query: 44 LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA 76
          +D+ +  S+ A    L+  +  +D L  NA I 
Sbjct: 66 VDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIM 98

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 42.6 bits (100), Expect = 5e-05
 Identities = 48/224 (21%), Positives = 82/224 (36%), Gaps = 53/224 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKA 54
           +TG N G+G G+  GL +    I+ +   +A   Q  +E L +       D++ +  I +
Sbjct: 13  ITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDS 72

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFK---VNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           +        G +D+L+NNA I  +   +          ++  +   F L       F   
Sbjct: 73  IVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ 132

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
            + G+++N++S                              M  F          +GG  
Sbjct: 133 GNGGKIINIAS------------------------------MLSF----------QGGIR 152

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
             +Y A+K  V  L+      LSQ  I     VN + PGY+ TD
Sbjct: 153 VPSYTASKSAVMGLTRALATELSQYNIN----VNAIAPGYMATD 192

Length = 251

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 47/242 (19%), Positives = 84/242 (34%), Gaps = 86/242 (35%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG  +G+G  I +   ++    + +  R+A +G+    +L+ L         D+ D   
Sbjct: 11  VTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVED 70

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIA----------------FKVNSSEPFGSQALHTMRT 95
            + +    +   G +D LVN A +                 F VN   PF          
Sbjct: 71  CRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPF---------- 120

Query: 96  NYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE 155
             F + +   ++    ++ G +VN+ S   H                             
Sbjct: 121 --FLMQEAIKLMRR-RKAEGTIVNIGSMSAH----------------------------- 148

Query: 156 FVELAQDGSHTKGGWPN-SAYAATKLGVTKLSF-LQHALLSQDAIREDLVVNCVHPGYVN 213
                       GG P  +AY A+K  +  L+    +ALL  + IR    VN ++ G++ 
Sbjct: 149 ------------GGQPFLAAYCASKGALATLTRNAAYALLR-NRIR----VNGLNIGWMA 191

Query: 214 TD 215
           T+
Sbjct: 192 TE 193

Length = 260

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 20/94 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQ----------------FDGIIYLTARDA-SRGQEALEKLQK 43
           +TGA++GIG  I     +                   G I+  A +  + G +AL  L  
Sbjct: 11  ITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQAL-PLV- 68

Query: 44  LDILDKNSIKALHDHLEAEHGGVDVLVNNA-AIA 76
            D+ D++ + A         GG+D+ VNNA AI 
Sbjct: 69  GDVRDEDQVAAAVAKAVERFGGIDICVNNASAIN 102

Length = 273

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 17/96 (17%)

Query: 1  VTGANKGIGYGIVKGLIQQ-FD-GIIYL--------TARDA-SRGQEALEKLQKLDILDK 49
          VT ++ GIG      L QQ FD GI +         TA +  S G  A  ++++LD+ D 
Sbjct: 7  VTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRA--EIRQLDLSDL 64

Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPF 85
                 D L    G +DVLVNNA       +  PF
Sbjct: 65 PEGAQALDKLIQRLGRIDVLVNNAG----AMTKAPF 96

Length = 256

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 42.9 bits (101), Expect = 8e-05
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 23/116 (19%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDK 49
           VTG   GIG    + L  +    + L   +    +    ++            K+D+ D+
Sbjct: 419 VTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE 477

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-------MRTNYF 98
            ++KA    +   +GGVD++VNNA IA    +S PF    L         + T YF
Sbjct: 478 QAVKAAFADVALAYGGVDIVVNNAGIA----TSSPFEETTLQEWQLNLDILATGYF 529

Length = 676

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 42.0 bits (98), Expect = 9e-05
 Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 71/239 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL------------DILD 48
           VTGA++GIG  I K L    DG + +     +R +EA E + ++            ++  
Sbjct: 9   VTGASRGIGRAIAKRLAN--DGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES 65

Query: 49  KNSIKALHDHLEAE------HGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFA 99
            + ++AL+  L+ E          D+L+NNA I   AF   ++E F  + +       F 
Sbjct: 66  LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFF 125

Query: 100 LIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
           +I         LR + R++N+SS+   +                         + +F+  
Sbjct: 126 IIQQA---LSRLRDNSRIINISSAATRIS------------------------LPDFI-- 156

Query: 160 AQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                         AY+ TK  +  ++F    L  Q   R  + VN + PG++ TDM++
Sbjct: 157 --------------AYSMTKGAINTMTF---TLAKQLGAR-GITVNAILPGFIKTDMNA 197

Length = 252

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 13/134 (9%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----QKLDILDKNSIKAL 55
           VTG   G+G    + L Q    +I + AR     +EAL  +       LD+ D  S++A 
Sbjct: 31  VTGGYSGLGLETTRALAQAGAHVI-VPARRPDVAREALAGIDGVEVVMLDLADLESVRAF 89

Query: 56  HDHLEAEHGGVDVLVNNAAI-AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH 114
            +        +D+L+NNA + A         G +A     TN+     + ++L+P L + 
Sbjct: 90  AERFLDSGRRIDILINNAGVMACPETRVGD-GWEA--QFATNHLGHFALVNLLWPALAAG 146

Query: 115 G--RVVNVSSSCGH 126
              RVV +SS+ GH
Sbjct: 147 AGARVVALSSA-GH 159

Length = 315

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSI 52
           +TGAN GIG       I +  G +++  R+ +R +EA ++++         L I+D +  
Sbjct: 6   ITGANSGIGKAAALA-IAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 53  KALHDHLEA---EHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
           K + + +E    E   + VL+NNA     VN  E           TN      +   L P
Sbjct: 65  KQVWEFVEEFKEEGKKLHVLINNAGCM--VNKRELTEDGLEKNFATNTLGTYILTTHLIP 122

Query: 110 LL-RSHG-RVVNVSS 122
           +L +    RV+ VSS
Sbjct: 123 VLEKEEDPRVITVSS 137

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 14/158 (8%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIK 53
           VTGA  GIG  + +  +   D  +     DA+      + L          D+ D  S+ 
Sbjct: 7   VTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLA 65

Query: 54  ALHDHLEAEHGGVDVLVNNA--AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           A   +  AE G VDVLV NA  A A  ++ + P   +A + +     A + V  +L  +L
Sbjct: 66  AALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEA-AYLCVEAVLEGML 124

Query: 112 -RSHGRVVNVSSSCGH--LCHVTSEALKKKLLHEIKSV 146
            RS G VVN+ S  G   L H    A K  L+H  K +
Sbjct: 125 KRSRGAVVNIGSVNGMAALGHPAYSAAKAGLIHYTKLL 162

Length = 257

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 25/137 (18%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKA 54
           VTG    IG  + + L+      + +   DA  G      L +       DI D  +I+ 
Sbjct: 11  VTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIER 69

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV---CDILFP-- 109
               + A  G VD+LVN A           +    L + R ++ A +DV      +    
Sbjct: 70  AVATVVARFGRVDILVNLACT---------YLDDGLASSRADWLAALDVNLVSAAMLAQA 120

Query: 110 ----LLRSHGRVVNVSS 122
               L R  G +VN +S
Sbjct: 121 AHPHLARGGGAIVNFTS 137

Length = 261

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 26/143 (18%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDILD 48
           +TGA+ GIG  + +   +Q    + L AR   R  +AL+                 D+ D
Sbjct: 7   ITGASSGIGQALAREYARQ-GATLGLVAR---RT-DALQAFAARLPKAARVSVYAADVRD 61

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDIL 107
            +++ A      A HG  DV++ NA I+    + E          M TNYF    +    
Sbjct: 62  ADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFG---MVATF 118

Query: 108 FPLL-----RSHGRVVNVSSSCG 125
            P +        G +V ++S  G
Sbjct: 119 QPFIAPMRAARRGTLVGIASVAG 141

Length = 257

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 55/228 (24%), Positives = 85/228 (37%), Gaps = 64/228 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL----DILDKNSIKALH 56
           +TG   GIG    + L  +    + +   D   G+ A +++  L    D+ D++++ AL 
Sbjct: 12  ITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALF 70

Query: 57  DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT--------MRTNYFALIDVCDILF 108
           D     +G VD+  NNA I      S P     L+T           N  ++   C    
Sbjct: 71  DTAAETYGSVDIAFNNAGI------SPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAAL 124

Query: 109 PLLRSHGR--VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
           P +   G+  ++N +S                                 FV  A  GS T
Sbjct: 125 PHMVRQGKGSIINTAS---------------------------------FV--AVMGSAT 149

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
                  +Y A+K GV  +S     L  Q A R+ + VN + PG VNT
Sbjct: 150 S----QISYTASKGGVLAMS---RELGVQFA-RQGIRVNALCPGPVNT 189

Length = 255

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 21/141 (14%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA++GIG  I   L      +     R+     E + +++         + D+   + 
Sbjct: 11  VTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDG 70

Query: 52  IKALHDHLEAE------HGGVDVLVNNAAIAFK---VNSSEPFGSQALHTMRTNYFALID 102
           +K L + L+ E         +D+LVNNA I  +    N++E    + +       F LI 
Sbjct: 71  VKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQ 130

Query: 103 VCDILFPLLRSHGRVVNVSSS 123
                 PLLR+ GRV+N+SS+
Sbjct: 131 QT---LPLLRAEGRVINISSA 148

Length = 254

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 40/182 (21%), Positives = 60/182 (32%), Gaps = 57/182 (31%)

Query: 43  KLDILDKNSIK-ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMR----TNY 97
            LD+ D+ +   AL D   A  G +D L NNA +        PF    L         N 
Sbjct: 53  ALDVTDRAAWAAALADFAAATGGRLDALFNNAGVG----RGGPFEDVPLAAHDRMVDINV 108

Query: 98  FALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE 155
             +++      P L++    RV+N +SS                                
Sbjct: 109 KGVLNGAYAALPYLKATPGARVINTASSSAIY---------------------------- 140

Query: 156 FVELAQDGSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
                        G P+ A Y+ATK  V  L+      L  +  R  + V  V P +V+T
Sbjct: 141 -------------GQPDLAVYSATKFAVRGLT----EALDVEWARHGIRVADVWPWFVDT 183

Query: 215 DM 216
            +
Sbjct: 184 PI 185

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 12/84 (14%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA-LEKLQKL---------DILDKN 50
          VTGA++GIG GI   L +     +Y+T R          E+++           D  D +
Sbjct: 8  VTGASRGIGRGIALQLGEA-GATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDHSDDD 66

Query: 51 SIKALHDHLEAEHGG-VDVLVNNA 73
           ++AL + +  E  G +D+LVNNA
Sbjct: 67 EVEALFERVAREQQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 75/251 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDAS---------RGQEALEKLQKLDIL 47
           +TGA++GIG      L+    G    + YL  RDA+         +G EAL      D+ 
Sbjct: 7   ITGASRGIGAAT--ALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALA--VAADVA 62

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTN---YFALIDV 103
           D+  +  L + ++ E G +D LVNNA I       E   +  L     TN    F    +
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSF----L 118

Query: 104 C--DILFPLLRSH----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
           C  + +  +   H    G +VNVSS    L                           E++
Sbjct: 119 CAREAVKRMSTRHGGRGGAIVNVSSMAARL-----------------------GSPGEYI 155

Query: 158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM- 216
           +                YAA+K  +  ++      ++ + IR    VN V PG + T++ 
Sbjct: 156 D----------------YAASKGAIDTMTIGLAKEVAAEGIR----VNAVRPGVIYTEIH 195

Query: 217 SSGKGPLTIDQ 227
           +SG  P  +D+
Sbjct: 196 ASGGEPGRVDR 206

Length = 248

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 12/84 (14%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDK 49
          +TGA   IG  +VK +++   GI+     D     E LE L            +LDI D+
Sbjct: 9  ITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQ 67

Query: 50 NSIKALHDHLEAEHGGVDVLVNNA 73
           S++        ++G +D  VN A
Sbjct: 68 ESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 54/226 (23%), Positives = 80/226 (35%), Gaps = 62/226 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           +T A +GIG  I     ++   +I     +     E L++L+         LD+ DK  +
Sbjct: 7   ITAAAQGIGRAIALAFAREGANVIATDINE-----EKLKELERGPGITTRVLDVTDKEQV 61

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP--L 110
            AL      E G +DVL N A      +  +         M  N  ++  +   + P  L
Sbjct: 62  AAL----AKEEGRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVLPKML 117

Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
            R  G ++N+SS       V S          IK V       N FV             
Sbjct: 118 ARKDGSIINMSS-------VAS---------SIKGV------PNRFV------------- 142

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               Y+ TK  V  L+    A  +Q  IR     N + PG V+T  
Sbjct: 143 ----YSTTKAAVIGLTKSVAADFAQQGIR----CNAICPGTVDTPS 180

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 39.6 bits (93), Expect = 9e-04
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 10/84 (11%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA  GIG        ++   ++  +  D +  +   E ++         ++D+ D ++
Sbjct: 320 VTGAGSGIGRETALAFAREGAEVV-ASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADA 378

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI 75
           ++A  + + AEHG  D++VNNA I
Sbjct: 379 MEAFAEWVRAEHGVPDIVVNNAGI 402

Length = 582

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 9e-04
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEKLQ------KLDILDKNSIK 53
           VTG N G+G G    L +    II  T        +  +EK        ++D+    S +
Sbjct: 20  VTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAE 79

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV 103
            +      E G +D+LVNNA    +        +  L     ++ A++D+
Sbjct: 80  KVVKEALEEFGKIDILVNNAGTIRR--------APLLEYKDEDWNAVMDI 121

Length = 258

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 48/222 (21%), Positives = 78/222 (35%), Gaps = 38/222 (17%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDK 49
           +TGAN GIG+   +        +I L  R+ SR   A+ ++ +           LD+   
Sbjct: 6   ITGANSGIGFETARSFALHGAHVI-LACRNMSRASAAVSRILEEWHKARVEAMTLDLASL 64

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAI-AFKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
            S++   +  +A++  + VLV NAA+ A     +E             +F L+ + + + 
Sbjct: 65  RSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLLEDVL 124

Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
               +  RV+ VSS       +                  LS    ++            
Sbjct: 125 R-RSAPARVIVVSSESHRFTDLPDSCGNLDFSL-------LSPPKKKY------------ 164

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPG 210
            W   AY   KL     S   H  LS   I      N +HPG
Sbjct: 165 -WSMLAYNRAKLCNILFSNELHRRLSPRGI----TSNSLHPG 201

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 16/106 (15%)

Query: 1   VTGANKGIGYGIVKGLIQQ--FDGIIYLTARDASRGQEALEKLQKL---------DILDK 49
           +TGA++GIG         +    GI Y  ARDA+  +E  + ++           D+ ++
Sbjct: 7   ITGASRGIGRATAVLAAARGWSVGINY--ARDAAAAEETADAVRAAGGRACVVAGDVANE 64

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRT 95
             + A+ D +++  G +D LVNNA I   V  S P        +R 
Sbjct: 65  ADVIAMFDAVQSAFGRLDALVNNAGI---VAPSMPLADMDAARLRR 107

Length = 248

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 14/89 (15%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDA--SRGQEALEKLQKL------------DI 46
           VTG   GIG  + + L +++   + L  R       +   + L  L            D+
Sbjct: 210 VTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISADV 269

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAI 75
            D  +++ L + +   +G +D +++ A +
Sbjct: 270 TDAAAVRRLLEKVRERYGAIDGVIHAAGV 298

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 15/125 (12%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKLQ---------KLDILDKN 50
           +TGA+ G+G    K L ++  G   + A R+  + + A ++L           +D+ D +
Sbjct: 11  ITGASSGVGLYAAKALAKR--GWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD 68

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS-QALH-TMRTNYFALIDVCDILF 108
           S++   D   A    +D LV NAA+ +     EP  S Q    +M TN+     +C++L 
Sbjct: 69  SVRRFVDDFRALGKPLDALVCNAAV-YMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLL 127

Query: 109 PLLRS 113
             L+ 
Sbjct: 128 EDLKK 132

Length = 322

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 12/84 (14%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
          VTG + G+G G+  GL +    I+ +   +     E +E++  L         D+   + 
Sbjct: 15 VTGCDTGLGQGMALGLAEAGCDIVGI---NIVEPTETIEQVTALGRRFLSLTADLRKIDG 71

Query: 52 IKALHDHLEAEHGGVDVLVNNAAI 75
          I AL +   AE G +D+LVNNA +
Sbjct: 72 IPALLERAVAEFGHIDILVNNAGL 95

Length = 253

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 13/135 (9%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------LDILDKNSIK 53
           VTG   GIG+ I +    +    + L  R      E   +L          D+ D  S++
Sbjct: 20  VTGGASGIGHAIAELFAAK-GARVALLDRSED-VAEVAAQLLGGNAKGLVCDVSDSQSVE 77

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFP--L 110
           A    + +  G +D+LVN+A +A  +  +E    +    T+  N      +   +    +
Sbjct: 78  AAVAAVISAFGRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMI 136

Query: 111 LRSHGRVVNVSSSCG 125
               G++VN++S  G
Sbjct: 137 AAGGGKIVNLASQAG 151

Length = 255

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 15/137 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG+ +GIG  I   L ++   ++    + A    E L+ +++          D+  +  
Sbjct: 11  VTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREG 70

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFK---VNSSEPFGSQALHTMRTNYFALIDVCDILF 108
            + L       +G  D+LVNNA +      +N  +    + +    T++ ++I     L 
Sbjct: 71  CETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHI---STDFKSVIYCSQELA 127

Query: 109 PLLRSHGRVVNVSSSCG 125
             +R  G +VN++S  G
Sbjct: 128 KEMREGGAIVNIASVAG 144

Length = 252

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 59/229 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------------LDIL 47
           VTG  KGIG  I   L Q  +G   +   ++S+  EA E L                D+ 
Sbjct: 11  VTGGAKGIGKAITVALAQ--EGAKVVINYNSSK--EAAENLVNELGKEGHDVYAVQADVS 66

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
                  L +      G VD+LVNNA I  +  + +          R ++  +ID     
Sbjct: 67  KVEDANRLVEEAVNHFGKVDILVNNAGIT-RDRTFKKLN-------REDWERVID----- 113

Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
                     VN+SS    + + TS  L      E   +  +S+++ +            
Sbjct: 114 ----------VNLSS----VFNTTSAVLPYITEAEEGRIISISSIIGQ-----------A 148

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           GG+  + Y+A K G+  L F +   L+ +  + ++ VN + PG+++T+M
Sbjct: 149 GGFGQTNYSAAKAGM--LGFTKS--LALELAKTNVTVNAICPGFIDTEM 193

Length = 247

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 0.003
 Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 15/131 (11%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG  KGIG   V   + +    +  TAR          +    D+       A+   + 
Sbjct: 14  VTGGTKGIGAATV-ARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVL 72

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQA-------LHTMRTNYFALIDVCDILFPLLRS 113
              GGVD+LV+         SS P G  A          +  N  A + +   L P + +
Sbjct: 73  ERLGGVDILVHVLG-----GSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIA 127

Query: 114 HGR--VVNVSS 122
            G   +++V+S
Sbjct: 128 RGSGVIIHVTS 138

Length = 260

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 36  EALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH---- 91
           +A   L K D+ D+  ++A  D    + G +D   NNA I  K N +E FG+        
Sbjct: 53  DAEVLLIKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVS 112

Query: 92  -TMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCG 125
             +R  ++ L  V      ++R    G +VN +S  G
Sbjct: 113 INLRGVFYGLEKV----LKVMREQGSGMIVNTASVGG 145

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-----KLQKLDILDKNSIKAL 55
          VTG   G+G   V+ L+ Q    + +     S G+   +     +   +D+  +  +KA 
Sbjct: 7  VTGGASGLGLATVERLLAQ-GAKVVILDLPNSPGETVAKLGDNCRFVPVDVTSEKDVKAA 65

Query: 56 HDHLEAEHGGVDVLVNNA--AIAFKV 79
              +A+ G +D++VN A  A+A K 
Sbjct: 66 LALAKAKFGRLDIVVNCAGIAVAAKT 91

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 42/182 (23%), Positives = 68/182 (37%), Gaps = 56/182 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------------KLDIL 47
           +TGA+ G+G    +   ++   ++ L     +RG+E LE L                D+ 
Sbjct: 13  ITGASAGVGRATARAFARRGAKVVLL-----ARGEEGLEALAAEIRAAGGEALAVVADVA 67

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIA-FKVNSSEPFGSQALHTMR----TNYF---- 98
           D  +++A  D  E E G +D  VNNA +  F      PF        R      Y     
Sbjct: 68  DAEAVQAAADRAEEELGPIDTWVNNAMVTVFG-----PFEDVTPEEFRRVTEVTYLGVVH 122

Query: 99  ----ALIDVCDILFPLLRSHGRVVNVSSS------------CG--HLCHVTSEALKKKLL 140
               AL      + P  R  G ++ V S+            C   H     +++L+ +LL
Sbjct: 123 GTLAAL----RHMRP--RDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELL 176

Query: 141 HE 142
           H+
Sbjct: 177 HD 178

Length = 334

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	230
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1205|consensus	282		100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1201|consensus	300		100.0
KOG1200|consensus	256		100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	99.98
PRK07791	286	short chain dehydrogenase; Provisional	99.98
PRK12747	252	short chain dehydrogenase; Provisional	99.98
PRK07063	260	short chain dehydrogenase; Provisional	99.98
KOG0725|consensus	270		99.98
PRK05867	253	short chain dehydrogenase; Provisional	99.98
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.98
PRK07062	265	short chain dehydrogenase; Provisional	99.98
PRK06139	330	short chain dehydrogenase; Provisional	99.98
PRK08303	305	short chain dehydrogenase; Provisional	99.98
PRK07478	254	short chain dehydrogenase; Provisional	99.97
PRK08862	227	short chain dehydrogenase; Provisional	99.97
PRK05872	296	short chain dehydrogenase; Provisional	99.97
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PRK05876	275	short chain dehydrogenase; Provisional	99.97
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.97
PRK06114	254	short chain dehydrogenase; Provisional	99.97
PRK08265	261	short chain dehydrogenase; Provisional	99.97
PRK06484	520	short chain dehydrogenase; Validated	99.97
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.97
PRK07825	273	short chain dehydrogenase; Provisional	99.97
PRK06398	258	aldose dehydrogenase; Validated	99.97
PRK06128	300	oxidoreductase; Provisional	99.97
PLN02780	320	ketoreductase/ oxidoreductase	99.97
PRK07985	294	oxidoreductase; Provisional	99.97
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK05854	313	short chain dehydrogenase; Provisional	99.97
PLN00015	308	protochlorophyllide reductase	99.97
KOG1611|consensus	249		99.97
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.97
PRK05993	277	short chain dehydrogenase; Provisional	99.97
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.97
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.97
PRK08643	256	acetoin reductase; Validated	99.97
PRK12743	256	oxidoreductase; Provisional	99.97
PRK07904	253	short chain dehydrogenase; Provisional	99.97
PRK05855	582	short chain dehydrogenase; Validated	99.97
PLN02253	280	xanthoxin dehydrogenase	99.97
PRK05866	293	short chain dehydrogenase; Provisional	99.97
PRK07677	252	short chain dehydrogenase; Provisional	99.97
PRK07831	262	short chain dehydrogenase; Provisional	99.97
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.97
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.97
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK07109	334	short chain dehydrogenase; Provisional	99.97
PRK07035	252	short chain dehydrogenase; Provisional	99.97
PRK09242	257	tropinone reductase; Provisional	99.97
PRK06172	253	short chain dehydrogenase; Provisional	99.97
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.96
PRK06483	236	dihydromonapterin reductase; Provisional	99.96
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.96
KOG1209|consensus	289		99.96
PRK07578	199	short chain dehydrogenase; Provisional	99.96
PRK05884	223	short chain dehydrogenase; Provisional	99.96
PRK07024	257	short chain dehydrogenase; Provisional	99.96
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.96
PRK07067	257	sorbitol dehydrogenase; Provisional	99.96
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.96
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.96
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.96
PRK06182	273	short chain dehydrogenase; Validated	99.96
PRK05693	274	short chain dehydrogenase; Provisional	99.96
PRK06194	287	hypothetical protein; Provisional	99.96
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.96
PRK08278	273	short chain dehydrogenase; Provisional	99.96
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.96
PRK06125	259	short chain dehydrogenase; Provisional	99.96
PRK06940	275	short chain dehydrogenase; Provisional	99.96
PRK06180	277	short chain dehydrogenase; Provisional	99.96
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.96
PRK07832	272	short chain dehydrogenase; Provisional	99.96
PRK05650	270	short chain dehydrogenase; Provisional	99.96
PRK06500	249	short chain dehydrogenase; Provisional	99.96
PRK12937	245	short chain dehydrogenase; Provisional	99.96
PRK06523	260	short chain dehydrogenase; Provisional	99.96
PRK05717	255	oxidoreductase; Validated	99.96
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.96
PRK06196	315	oxidoreductase; Provisional	99.96
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.96
PRK08263	275	short chain dehydrogenase; Provisional	99.96
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.96
PRK06179	270	short chain dehydrogenase; Provisional	99.96
PRK06841	255	short chain dehydrogenase; Provisional	99.96
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.96
PRK12744	257	short chain dehydrogenase; Provisional	99.96
PRK08251	248	short chain dehydrogenase; Provisional	99.96
PRK06101	240	short chain dehydrogenase; Provisional	99.96
PRK12742	237	oxidoreductase; Provisional	99.96
PRK06484	520	short chain dehydrogenase; Validated	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
COG1028	251	FabG Dehydrogenases with different specificities (	99.96
PRK07890	258	short chain dehydrogenase; Provisional	99.96
KOG1208|consensus	314		99.96
PRK08267	260	short chain dehydrogenase; Provisional	99.96
PRK07856	252	short chain dehydrogenase; Provisional	99.96
PRK06197	306	short chain dehydrogenase; Provisional	99.96
PRK07069	251	short chain dehydrogenase; Validated	99.96
PRK07814	263	short chain dehydrogenase; Provisional	99.96
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.96
PRK07454	241	short chain dehydrogenase; Provisional	99.96
PRK07576	264	short chain dehydrogenase; Provisional	99.96
KOG1610|consensus	322		99.96
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.96
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.96
PRK08177	225	short chain dehydrogenase; Provisional	99.96
PRK12746	254	short chain dehydrogenase; Provisional	99.96
PRK08628	258	short chain dehydrogenase; Provisional	99.96
PRK06701	290	short chain dehydrogenase; Provisional	99.96
PRK08226	263	short chain dehydrogenase; Provisional	99.96
PRK06057	255	short chain dehydrogenase; Provisional	99.95
PRK06949	258	short chain dehydrogenase; Provisional	99.95
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.95
PRK12939	250	short chain dehydrogenase; Provisional	99.95
PRK06138	252	short chain dehydrogenase; Provisional	99.95
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.95
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.95
KOG4169|consensus	261		99.95
PRK09072	263	short chain dehydrogenase; Provisional	99.95
PRK08703	239	short chain dehydrogenase; Provisional	99.95
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.95
PRK07774	250	short chain dehydrogenase; Provisional	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
PRK09134	258	short chain dehydrogenase; Provisional	99.95
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.95
PRK06123	248	short chain dehydrogenase; Provisional	99.95
PRK07102	243	short chain dehydrogenase; Provisional	99.95
PRK10538	248	malonic semialdehyde reductase; Provisional	99.95
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK06198	260	short chain dehydrogenase; Provisional	99.95
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.95
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.95
PRK06914	280	short chain dehydrogenase; Provisional	99.95
KOG1207|consensus	245		99.95
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.95
PRK06181	263	short chain dehydrogenase; Provisional	99.95
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.95
PRK09186	256	flagellin modification protein A; Provisional	99.95
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.95
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK07775	274	short chain dehydrogenase; Provisional	99.94
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK07041	230	short chain dehydrogenase; Provisional	99.94
KOG1014|consensus	312		99.94
PRK07577	234	short chain dehydrogenase; Provisional	99.94
PRK05875	276	short chain dehydrogenase; Provisional	99.94
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
KOG1210|consensus	331		99.94
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.94
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.94
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK12827	249	short chain dehydrogenase; Provisional	99.94
PRK07074	257	short chain dehydrogenase; Provisional	99.94
KOG1199|consensus	260		99.94
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK06924	251	short chain dehydrogenase; Provisional	99.94
PRK07326	237	short chain dehydrogenase; Provisional	99.94
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.93
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK07023	243	short chain dehydrogenase; Provisional	99.93
PRK07060	245	short chain dehydrogenase; Provisional	99.93
PRK06953	222	short chain dehydrogenase; Provisional	99.93
PRK09135	249	pteridine reductase; Provisional	99.93
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.93
PRK08324	681	short chain dehydrogenase; Validated	99.93
PRK09291	257	short chain dehydrogenase; Provisional	99.93
PRK12828	239	short chain dehydrogenase; Provisional	99.93
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.93
PRK12367	245	short chain dehydrogenase; Provisional	99.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK07806	248	short chain dehydrogenase; Provisional	99.92
PRK12829	264	short chain dehydrogenase; Provisional	99.92
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.92
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK08264	238	short chain dehydrogenase; Validated	99.92
PRK08017	256	oxidoreductase; Provisional	99.92
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.91
PRK08219	227	short chain dehydrogenase; Provisional	99.89
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.88
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.88
KOG1204|consensus	253		99.88
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.86
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.86
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.82
KOG1478|consensus	341		99.8
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.78
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.77
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.72
PLN03209	576	translocon at the inner envelope of chloroplast su	99.68
PLN02653	340	GDP-mannose 4,6-dehydratase	99.68
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.66
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.66
PRK06720	169	hypothetical protein; Provisional	99.63
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.62
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.62
PLN00198	338	anthocyanidin reductase; Provisional	99.58
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.57
PLN02650	351	dihydroflavonol-4-reductase	99.55
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.55
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.55
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.55
PLN02572	442	UDP-sulfoquinovose synthase	99.53
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.52
PLN02214	342	cinnamoyl-CoA reductase	99.52
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.52
PLN02583	297	cinnamoyl-CoA reductase	99.51
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.5
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.5
PLN02240	352	UDP-glucose 4-epimerase	99.5
KOG1502|consensus	327		99.49
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.48
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.47
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.45
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.45
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.43
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.42
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.41
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.41
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.4
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.39
PLN02427	386	UDP-apiose/xylose synthase	99.38
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.38
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.37
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.35
PLN02686	367	cinnamoyl-CoA reductase	99.34
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.32
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.29
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.26
PLN02260	668	probable rhamnose biosynthetic enzyme	99.25
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.25
KOG1371|consensus	343		99.24
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.22
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.22
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.2
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.16
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.13
PLN02206	442	UDP-glucuronate decarboxylase	99.12
PLN02778	298	3,5-epimerase/4-reductase	99.1
KOG4022|consensus	236		99.05
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.04
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.02
CHL00194	317	ycf39 Ycf39; Provisional	99.02
PRK07201	657	short chain dehydrogenase; Provisional	98.97
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.89
PLN02260	668	probable rhamnose biosynthetic enzyme	98.88
PLN02996	491	fatty acyl-CoA reductase	98.82
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.78
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.76
PRK05865	854	hypothetical protein; Provisional	98.75
KOG1430|consensus	361		98.74
KOG1429|consensus	350		98.74
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.7
PLN02503	605	fatty acyl-CoA reductase 2	98.63
PRK08309	177	short chain dehydrogenase; Provisional	98.48
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.47
KOG1202|consensus	2376		98.46
PRK12320	699	hypothetical protein; Provisional	98.43
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.43
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.43
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.42
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.27
KOG1221|consensus	467		98.25
KOG0747|consensus	331		98.16
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.1
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.9
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.87
PLN00016	378	RNA-binding protein; Provisional	97.85
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.81
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.7
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.67
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.6
KOG2865|consensus	391		97.58
KOG1372|consensus	376		97.57
KOG1431|consensus	315		97.56
COG2910	211	Putative NADH-flavin reductase [General function p	97.54
PLN00106	323	malate dehydrogenase	97.49
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.47
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.46
PRK14982	340	acyl-ACP reductase; Provisional	97.37
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.33
KOG2774|consensus	366		97.3
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.22
PTZ00325	321	malate dehydrogenase; Provisional	97.2
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.04
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.89
KOG2733|consensus	423		96.84
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.81
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.78
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.74
PRK09620	229	hypothetical protein; Provisional	96.65
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.62
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.6
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.59
KOG1203|consensus	411		96.53
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.48
KOG1197|consensus	336		96.46
KOG4039|consensus	238		96.44
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.37
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.35
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.3
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.2
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.2
COG3268	382	Uncharacterized conserved protein [Function unknow	96.15
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.08
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.06
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.06
PRK05086	312	malate dehydrogenase; Provisional	96.04
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.02
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.91
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.89
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.88
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	95.85
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.76
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.66
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.52
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.52
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.47
KOG0023|consensus	360		95.45
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.34
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.31
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.17
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.13
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.11
PRK05442	326	malate dehydrogenase; Provisional	95.1
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.07
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.01
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	94.99
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	94.98
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	94.98
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	94.98
PLN00112	444	malate dehydrogenase (NADP); Provisional	94.92
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	94.81
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.8
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.72
PRK08655	437	prephenate dehydrogenase; Provisional	94.69
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	94.66
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	94.66
KOG1198|consensus	347		94.57
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	94.57
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	94.55
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.37
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.36
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.31
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.27
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.26
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.21
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	94.15
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	94.14
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	94.08
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.08
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	94.02
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	94.01
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	93.94
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	93.93
PLN02740	381	Alcohol dehydrogenase-like	93.9
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	93.89
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.83
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	93.81
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	93.81
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	93.8
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	93.6
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	93.59
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.55
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	93.55
PLN02827	378	Alcohol dehydrogenase-like	93.53
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	93.53
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	93.52
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	93.49
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	93.48
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	93.47
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	93.44
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	93.44
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	93.38
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	93.34
PRK08306	296	dipicolinate synthase subunit A; Reviewed	93.28
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	93.19
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	93.14
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	93.13
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	92.99
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	92.98
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	92.95
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	92.78
COG0569	225	TrkA K+ transport systems, NAD-binding component [	92.66
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	92.63
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	92.5
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	92.36
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	92.3
PLN00203	519	glutamyl-tRNA reductase	92.28
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	92.26
PLN02586	360	probable cinnamyl alcohol dehydrogenase	92.08
PRK06849	389	hypothetical protein; Provisional	92.08
KOG1196|consensus	343		92.07
PTZ00354	334	alcohol dehydrogenase; Provisional	92.04
KOG0025|consensus	354		91.95
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	91.86
PTZ00082	321	L-lactate dehydrogenase; Provisional	91.8
PTZ00117	319	malate dehydrogenase; Provisional	91.73
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	91.71
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	91.66
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	91.54
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	91.5
PLN02602	350	lactate dehydrogenase	91.36
PRK06223	307	malate dehydrogenase; Reviewed	91.32
PLN02178	375	cinnamyl-alcohol dehydrogenase	91.29
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	91.15
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	91.04
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	90.98
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	90.97
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	90.95
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	90.95
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	90.91
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	90.82
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	90.79
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	90.77
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	90.22
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	90.21
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	90.15
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	90.14
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	90.05
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	90.03
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	90.03
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	89.97
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	89.91
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	89.88
PRK14968	188	putative methyltransferase; Provisional	89.88
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	89.88
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	89.85
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	89.74
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	89.66
PRK08328	231	hypothetical protein; Provisional	89.66
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	89.64
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	89.63
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	89.61
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	89.49
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	89.31
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	89.3
PLN02514	357	cinnamyl-alcohol dehydrogenase	89.25
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	89.13
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	89.11
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	89.1
PRK09496	453	trkA potassium transporter peripheral membrane com	89.08
PF12241	237	Enoyl_reductase: Trans-2-enoyl-CoA reductase catal	89.04
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	88.88
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	88.86
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	88.81
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	88.53
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	88.5
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	88.48
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	88.46
PLN02494	477	adenosylhomocysteinase	88.29
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	88.28
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	88.1
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	88.03
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	87.98
PRK08618	325	ornithine cyclodeaminase; Validated	87.84
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	87.72
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	87.66
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	87.63
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	87.61
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	87.45
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	87.28
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	87.23
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	87.11
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	87.1
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	87.06
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	86.99
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	86.82
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	86.8
PRK08291	330	ectoine utilization protein EutC; Validated	86.76

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.6e-36  Score=241.63  Aligned_cols=171  Identities=27%  Similarity=0.372  Sum_probs=159.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-------ccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------LDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-------~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      |||||+|||.++|++|++. +..|++.+|..+++++...++.+       .|++|.++++.+++.+.++|++||+|||||
T Consensus        11 ITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNA   89 (246)
T COG4221          11 ITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNA   89 (246)
T ss_pred             EecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecC
Confidence            7999999999999999999 66999999999999999998882       899999999999999999999999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |.....++.+.+.++|++++++|+.|.++.+++++|.|.  +.|.||++||++|.+                        
T Consensus        90 Gl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~------------------------  145 (246)
T COG4221          90 GLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY------------------------  145 (246)
T ss_pred             CCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc------------------------
Confidence            998778899999999999999999999999999999995  458999999999944                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                      +.++...|+++|+++.+|.+.|++|+...    +|||..|.||.+.|..
T Consensus       146 ----------------~y~~~~vY~ATK~aV~~fs~~LR~e~~g~----~IRVt~I~PG~v~~~~  190 (246)
T COG4221         146 ----------------PYPGGAVYGATKAAVRAFSLGLRQELAGT----GIRVTVISPGLVETTE  190 (246)
T ss_pred             ----------------cCCCCccchhhHHHHHHHHHHHHHHhcCC----CeeEEEecCceeccee
Confidence                            56677999999999999999999999976    7999999999996654

>KOG1205|consensus

Probab=100.00  E-value=2.4e-36  Score=249.54  Aligned_cols=175  Identities=28%  Similarity=0.365  Sum_probs=154.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      |||||+|||+++|++|+++ +..++++.|...+++...+++++           +|++|++++.++++++...||++|+|
T Consensus        17 ITGASsGIG~~lA~~la~~-G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvL   95 (282)
T KOG1205|consen   17 ITGASSGIGEALAYELAKR-GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVL   95 (282)
T ss_pred             EeCCCcHHHHHHHHHHHhC-CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEE
Confidence            7999999999999999999 66777888888888777665553           89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||+.......+.+.+++.++|++|++|+..++++++|+|+++  |+||++||++|+.                    
T Consensus        96 VNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~--------------------  155 (282)
T KOG1205|consen   96 VNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM--------------------  155 (282)
T ss_pred             EecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc--------------------
Confidence            999999986667778889999999999999999999999999754  9999999999965                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                          +.+....|++||+|+.+|+.+|+.|+......  +++ +|+||+|+|++...
T Consensus       156 --------------------~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~--i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  156 --------------------PLPFRSIYSASKHALEGFFETLRQELIPLGTI--III-LVSPGPIETEFTGK  204 (282)
T ss_pred             --------------------CCCcccccchHHHHHHHHHHHHHHHhhccCce--EEE-EEecCceeecccch
Confidence                                34444799999999999999999999998444  667 99999999997654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3.2e-36  Score=247.01  Aligned_cols=173  Identities=27%  Similarity=0.331  Sum_probs=162.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      |||||+|||+++|++|+++ +++|+++.|+.+++++..+++++          +|++++++++++.+++.+....||+||
T Consensus        11 ITGASsGIG~~~A~~lA~~-g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLV   89 (265)
T COG0300          11 ITGASSGIGAELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLV   89 (265)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEE
Confidence            7999999999999999999 77999999999999999888775          899999999999999999989999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||+...+++.+.+.++.++++++|+.+.+.++++++|.|.+  .|.|||++|.+|+.                     
T Consensus        90 NNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~---------------------  148 (265)
T COG0300          90 NNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI---------------------  148 (265)
T ss_pred             ECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC---------------------
Confidence            9999999999999999999999999999999999999999964  48999999999955                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.+.++.|++||+++.+|+++|+.|++..    ||+|.+++||++.|+|++
T Consensus       149 -------------------p~p~~avY~ATKa~v~~fSeaL~~EL~~~----gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         149 -------------------PTPYMAVYSATKAFVLSFSEALREELKGT----GVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHHHhcCC----CeEEEEEecCcccccccc
Confidence                               45566999999999999999999999887    888999999999999996

>KOG1201|consensus

Probab=100.00  E-value=1.1e-34  Score=238.02  Aligned_cols=177  Identities=24%  Similarity=0.322  Sum_probs=164.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||+++|.+|+++ +..+++.+.+.+..++..+.+++        ||+++.+++.+.+++++++.|.+|+||||
T Consensus        43 ITGgg~GlGr~ialefa~r-g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNN  121 (300)
T KOG1201|consen   43 ITGGGSGLGRLIALEFAKR-GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNN  121 (300)
T ss_pred             EeCCCchHHHHHHHHHHHh-CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEec
Confidence            7999999999999999999 55999999999999888888772        99999999999999999999999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||+....++.+.+.++++++|++|+.|+++.+|+|+|.|.  ++|.||+++|++|..                       
T Consensus       122 AGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~-----------------------  178 (300)
T KOG1201|consen  122 AGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF-----------------------  178 (300)
T ss_pred             cccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc-----------------------
Confidence            9999889999999999999999999999999999999984  569999999999966                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       +.++...|++||.|+.+|.++|..|+...+.+ ||+...|+|++++|+|..+
T Consensus       179 -----------------g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~-~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  179 -----------------GPAGLADYCASKFAAVGFHESLSMELRALGKD-GIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             -----------------CCccchhhhhhHHHHHHHHHHHHHHHHhcCCC-CeeEEEEeeeeccccccCC
Confidence                             44566999999999999999999999988877 7999999999999999874

>KOG1200|consensus

Probab=100.00  E-value=8.4e-35  Score=223.96  Aligned_cols=177  Identities=24%  Similarity=0.320  Sum_probs=160.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||++++..|+++ +..|+..+++....++.+..+..        ||++++++++.++++..+.++++++||||
T Consensus        19 vtGg~sGIGrAia~~la~~-Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVnc   97 (256)
T KOG1200|consen   19 VTGGSSGIGRAIAQLLAKK-GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNC   97 (256)
T ss_pred             EecCCchHHHHHHHHHHhc-CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEc
Confidence            6999999999999999999 66788888887778877777654        99999999999999999999999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc--cC-C-ceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL--RS-H-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l--~~-~-g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||+..+..+..+..++|++.+.+|+.|.|+++|++.+.|  .+ + .+|||+||+-|..                     
T Consensus        98 AGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki---------------------  156 (256)
T KOG1200|consen   98 AGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI---------------------  156 (256)
T ss_pred             CccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc---------------------
Confidence            999988888899999999999999999999999999874  22 2 4999999999955                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP  222 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~  222 (230)
                                         +..++..|.++|.++.+|+|+.|+|++.+    |||||+|.||++.|||+...++
T Consensus       157 -------------------GN~GQtnYAAsK~GvIgftktaArEla~k----nIrvN~VlPGFI~tpMT~~mp~  207 (256)
T KOG1200|consen  157 -------------------GNFGQTNYAASKGGVIGFTKTAARELARK----NIRVNVVLPGFIATPMTEAMPP  207 (256)
T ss_pred             -------------------ccccchhhhhhcCceeeeeHHHHHHHhhc----CceEeEeccccccChhhhhcCH
Confidence                               56678999999999999999999999998    7889999999999999988765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-33  Score=233.22  Aligned_cols=172  Identities=20%  Similarity=0.233  Sum_probs=148.9

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-------hcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-------QKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+  +|||++++++|+++ +..|++.+|+. +.++..+++       ..+|++|+++++++++++.+.++++|+|||
T Consensus        12 ItGas~~~gIG~a~a~~la~~-G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   89 (252)
T PRK06079         12 VMGVANKRSIAWGCAQAIKDQ-GATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKIDGIVH   89 (252)
T ss_pred             EeCCCCCCchHHHHHHHHHHC-CCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            79999  89999999999999 55788888873 343333332       239999999999999999999999999999


Q ss_pred             ccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          72 NAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        72 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||...+    .++.+.+.++|++++++|+.+++.++++++|.|+++|+||++||.++..                    
T Consensus        90 nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~--------------------  149 (252)
T PRK06079         90 AIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER--------------------  149 (252)
T ss_pred             cccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc--------------------
Confidence            9998643    5677888999999999999999999999999998889999999988733                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.+.+..|++||+|+.+|+++++.|+++.    ||+||+|+||+|+|++..
T Consensus       150 --------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gI~vn~i~PG~v~T~~~~  196 (252)
T PRK06079        150 --------------------AIPNYNVMGIAKAALESSVRYLARDLGKK----GIRVNAISAGAVKTLAVT  196 (252)
T ss_pred             --------------------cCCcchhhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCcccccccc
Confidence                                33456899999999999999999999987    788999999999999854

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-33  Score=235.11  Aligned_cols=173  Identities=18%  Similarity=0.218  Sum_probs=147.1

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCcchh---HHHHHh-----hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDASRG---QEALEK-----LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~~~~---~~~~~~-----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++  |||+++|++|+++ +..|++.+|+....   ++..+.     ...+|++|+++++++++++.+.+++||+||
T Consensus        12 VTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lV   90 (271)
T PRK06505         12 IMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKLDFVV   90 (271)
T ss_pred             EeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            799996  9999999999999 55777777765322   222222     123899999999999999999999999999


Q ss_pred             EccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||....    .++.+.+.++|++++++|+.++++++++++|.|+++|+||++||..+..                   
T Consensus        91 nnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~-------------------  151 (271)
T PRK06505         91 HAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR-------------------  151 (271)
T ss_pred             ECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc-------------------
Confidence            99998642    3566788999999999999999999999999998779999999988733                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           +.+.+..|++||+|+.+|+++|+.|+.++    |||||+|+||+++|++..
T Consensus       152 ---------------------~~~~~~~Y~asKaAl~~l~r~la~el~~~----gIrVn~v~PG~i~T~~~~  198 (271)
T PRK06505        152 ---------------------VMPNYNVMGVAKAALEASVRYLAADYGPQ----GIRVNAISAGPVRTLAGA  198 (271)
T ss_pred             ---------------------cCCccchhhhhHHHHHHHHHHHHHHHhhc----CeEEEEEecCCccccccc
Confidence                                 33455899999999999999999999987    899999999999999854

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-33  Score=235.25  Aligned_cols=173  Identities=23%  Similarity=0.273  Sum_probs=148.0

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHhh-----hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEKL-----QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~~-----~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+  +|||+++|+.|+++| ..|++++|+..   .+++..+++     ..+|++|+++++++++++.+.++++|+||
T Consensus        10 ItGas~~~GIG~aiA~~la~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilV   88 (274)
T PRK08415         10 IVGVANNKSIAYGIAKACFEQG-AELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGKIDFIV   88 (274)
T ss_pred             EECCCCCCCHHHHHHHHHHHCC-CEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79997  899999999999995 57778888742   333333222     23899999999999999999999999999


Q ss_pred             EccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||+..+    .++.+.+.+.|+++|++|+.|+++++++++|.|+++|+||++||.++..                   
T Consensus        89 nnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~-------------------  149 (274)
T PRK08415         89 HSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK-------------------  149 (274)
T ss_pred             ECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc-------------------
Confidence            99998542    5677888999999999999999999999999998889999999987733                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           +.+.+..|++||+|+.+|+++++.|+.+.    ||+||+|+||+++|++..
T Consensus       150 ---------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~  196 (274)
T PRK08415        150 ---------------------YVPHYNVMGVAKAALESSVRYLAVDLGKK----GIRVNAISAGPIKTLAAS  196 (274)
T ss_pred             ---------------------CCCcchhhhhHHHHHHHHHHHHHHHhhhc----CeEEEEEecCccccHHHh
Confidence                                 33445789999999999999999999987    799999999999998754

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.2e-33  Score=230.34  Aligned_cols=173  Identities=17%  Similarity=0.224  Sum_probs=146.5

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHh-----hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEK-----LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~-----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++  |||+++|+.|+++| ..|++.+|+..   .+++..++     +..+|++|+++++++++++.+.++++|+||
T Consensus        13 ITGas~~~GIG~a~a~~la~~G-~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   91 (260)
T PRK06603         13 ITGIANNMSISWAIAQLAKKHG-AELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSFDFLL   91 (260)
T ss_pred             EECCCCCcchHHHHHHHHHHcC-CEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCccEEE
Confidence            799997  99999999999995 56777777632   12222222     123899999999999999999999999999


Q ss_pred             EccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||+|....    .++.+.+.++|++++++|+.+++.++++++|.|+++|+||++||..+..                   
T Consensus        92 nnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~-------------------  152 (260)
T PRK06603         92 HGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK-------------------  152 (260)
T ss_pred             EccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc-------------------
Confidence            99997542    4567788999999999999999999999999998889999999987732                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           +.+.+..|++||+|+.+|+++++.|+.+.    ||+||+|+||+++|+|..
T Consensus       153 ---------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~  199 (260)
T PRK06603        153 ---------------------VIPNYNVMGVAKAALEASVKYLANDMGEN----NIRVNAISAGPIKTLASS  199 (260)
T ss_pred             ---------------------CCCcccchhhHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcCcchhhh
Confidence                                 33455899999999999999999999987    799999999999999854

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-33  Score=231.04  Aligned_cols=172  Identities=17%  Similarity=0.213  Sum_probs=151.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++++.|+++ +..|++++|+.++++...+++.          .+|++|+++++++++++. .++++|++|
T Consensus        13 ItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv   90 (263)
T PRK08339         13 TTASSKGIGFGVARVLARA-GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGEPDIFF   90 (263)
T ss_pred             EeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEE
Confidence            7999999999999999999 4578889999887776655442          289999999999999986 589999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||+|...+.++.+.+.++|++++++|+.++++++++++|.|+++  |+||++||.++..                     
T Consensus        91 ~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~---------------------  149 (263)
T PRK08339         91 FSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE---------------------  149 (263)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC---------------------
Confidence            99998776778889999999999999999999999999999643  8999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.+....|+++|+|+.+|+++++.|++++    |||||+|+||+++|++..
T Consensus       150 -------------------~~~~~~~y~asKaal~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~  196 (263)
T PRK08339        150 -------------------PIPNIALSNVVRISMAGLVRTLAKELGPK----GITVNGIMPGIIRTDRVI  196 (263)
T ss_pred             -------------------CCCcchhhHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCcCccHHHH
Confidence                               34455889999999999999999999987    899999999999999753

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.7e-33  Score=229.28  Aligned_cols=174  Identities=18%  Similarity=0.215  Sum_probs=148.1

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcch---hHHHHHhh-----hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDASR---GQEALEKL-----QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~~---~~~~~~~~-----~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+  +|||++++++|+++| ..|++++|+.+.   +++..+++     ..+|++|+++++++++++.+.++++|++|
T Consensus        15 ItGas~g~GIG~a~a~~la~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv   93 (258)
T PRK07533         15 VVGIANEQSIAWGCARAFRALG-AELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRLDFLL   93 (258)
T ss_pred             EECCCCCCcHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79998  599999999999994 578888887543   23333332     23899999999999999999999999999


Q ss_pred             EccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||...+    .++.+.+.++|+++|++|+.|+++++++++|.|+++|+||++||..+..                   
T Consensus        94 ~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-------------------  154 (258)
T PRK07533         94 HSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-------------------  154 (258)
T ss_pred             EcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-------------------
Confidence            99998642    4567788899999999999999999999999998889999999987732                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                           +.+.+..|+++|+|+.+|+++++.|+.+.    ||+||+|+||+++|+|.+.
T Consensus       155 ---------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gI~Vn~v~PG~v~T~~~~~  202 (258)
T PRK07533        155 ---------------------VVENYNLMGPVKAALESSVRYLAAELGPK----GIRVHAISPGPLKTRAASG  202 (258)
T ss_pred             ---------------------CCccchhhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCCcCChhhhc
Confidence                                 23345789999999999999999999987    7899999999999998654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.2e-32  Score=228.85  Aligned_cols=173  Identities=21%  Similarity=0.249  Sum_probs=145.6

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcc--hhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDAS--RGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~--~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      ||||+  +|||+++|++|+++| ..|++..|+.+  +.++..+++         ..+|++|+++++++++++.+.++++|
T Consensus        11 ItGas~~~GIG~aia~~la~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD   89 (258)
T PRK07370         11 VTGIANNRSIAWGIAQQLHAAG-AELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKLD   89 (258)
T ss_pred             EeCCCCCCchHHHHHHHHHHCC-CEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCCC
Confidence            79986  899999999999995 46666654332  222222222         23899999999999999999999999


Q ss_pred             EEEEccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          68 VLVNNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        68 ~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      +||||+|+...    .++.+.+.++|+++|++|+.|+++++++++|.|+++|+||++||..+..                
T Consensus        90 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~----------------  153 (258)
T PRK07370         90 ILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR----------------  153 (258)
T ss_pred             EEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc----------------
Confidence            99999998632    4577788899999999999999999999999998889999999988733                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                              +.+++..|++||+|+.+|+++|+.|+.+.    ||+||+|+||+++|++..
T Consensus       154 ------------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gI~Vn~i~PG~v~T~~~~  200 (258)
T PRK07370        154 ------------------------AIPNYNVMGVAKAALEASVRYLAAELGPK----NIRVNAISAGPIRTLASS  200 (258)
T ss_pred             ------------------------CCcccchhhHHHHHHHHHHHHHHHHhCcC----CeEEEEEecCcccCchhh
Confidence                                    34456899999999999999999999987    799999999999999864

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-32  Score=228.38  Aligned_cols=173  Identities=18%  Similarity=0.196  Sum_probs=146.9

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCc---chhHHHHHhh-----hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDA---SRGQEALEKL-----QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~---~~~~~~~~~~-----~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+  +|||+++|+.|+++| ..|++++|+.   +.++...+++     ..+|++|+++++++++++.+++++||++|
T Consensus        15 ItGas~~~GIG~aia~~la~~G-~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv   93 (272)
T PRK08159         15 ILGVANNRSIAWGIAKACRAAG-AELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKLDFVV   93 (272)
T ss_pred             EECCCCCCcHHHHHHHHHHHCC-CEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            79997  899999999999995 4777777763   2333333332     23899999999999999999999999999


Q ss_pred             EccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||+..+    .++.+.+.+.|+++|++|+.++++++++++|+|+++|+||++||.++..                   
T Consensus        94 ~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-------------------  154 (272)
T PRK08159         94 HAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-------------------  154 (272)
T ss_pred             ECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-------------------
Confidence            99998642    4566788899999999999999999999999998889999999987732                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           +.+.+..|++||+|+.+|+++++.|+.+.    ||+||+|+||+++|++..
T Consensus       155 ---------------------~~p~~~~Y~asKaal~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~  201 (272)
T PRK08159        155 ---------------------VMPHYNVMGVAKAALEASVKYLAVDLGPK----NIRVNAISAGPIKTLAAS  201 (272)
T ss_pred             ---------------------CCCcchhhhhHHHHHHHHHHHHHHHhccc----CeEEEEeecCCcCCHHHh
Confidence                                 34456899999999999999999999987    799999999999998753

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-32  Score=226.17  Aligned_cols=173  Identities=18%  Similarity=0.186  Sum_probs=147.8

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCc---chhHHHHHhhh-------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDA---SRGQEALEKLQ-------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~---~~~~~~~~~~~-------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+  +|||+++|++|+++| ..|++.+|+.   +.+++..+++.       .+|++|+++++.+++++.+.+++||+
T Consensus        12 ItGa~~s~GIG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~   90 (257)
T PRK08594         12 VMGVANKRSIAWGIARSLHNAG-AKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVGVIHG   90 (257)
T ss_pred             EECCCCCCCHHHHHHHHHHHCC-CEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCccE
Confidence            79997  899999999999995 4677776643   34555544432       28999999999999999999999999


Q ss_pred             EEEccCCcc----ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          69 LVNNAAIAF----KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        69 lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +|||||+..    ..++.+.+.+.|.+++++|+.++++++++++|.|+++|+||++||..+..                 
T Consensus        91 lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----------------  153 (257)
T PRK08594         91 VAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER-----------------  153 (257)
T ss_pred             EEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----------------
Confidence            999999864    24566788899999999999999999999999998889999999998843                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                             +.+.+..|++||+|+.+|+++++.|+++.    ||+||+|+||+++|++.+
T Consensus       154 -----------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrvn~v~PG~v~T~~~~  200 (257)
T PRK08594        154 -----------------------VVQNYNVMGVAKASLEASVKYLANDLGKD----GIRVNAISAGPIRTLSAK  200 (257)
T ss_pred             -----------------------CCCCCchhHHHHHHHHHHHHHHHHHhhhc----CCEEeeeecCcccCHhHh
Confidence                                   33455899999999999999999999987    788999999999998753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.1e-32  Score=226.88  Aligned_cols=172  Identities=15%  Similarity=0.147  Sum_probs=144.1

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++  |||+++++.|+++| ..|++.+|+. ++++..+++         ..+|++|+++++++++++.+.++++|++
T Consensus        11 ITGas~~~GIG~aia~~la~~G-~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l   88 (262)
T PRK07984         11 VTGVASKLSIAYGIAQAMHREG-AELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDGF   88 (262)
T ss_pred             EeCCCCCccHHHHHHHHHHHCC-CEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCEE
Confidence            799985  99999999999995 5677777763 333333322         2289999999999999999999999999


Q ss_pred             EEccCCccccC-----CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          70 VNNAAIAFKVN-----SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        70 v~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |||||+.....     +.+.+.+.|++++++|+.|++.+++++.|.|+++|+||++||.++..                 
T Consensus        89 innAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-----------------  151 (262)
T PRK07984         89 VHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------------  151 (262)
T ss_pred             EECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----------------
Confidence            99999854322     44567889999999999999999999999887779999999987732                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                             +.+.+..|++||+|+.+|+++++.|+.+.    ||+||+|+||+++|++..
T Consensus       152 -----------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrVn~i~PG~v~T~~~~  198 (262)
T PRK07984        152 -----------------------AIPNYNVMGLAKASLEANVRYMANAMGPE----GVRVNAISAGPIRTLAAS  198 (262)
T ss_pred             -----------------------CCCCcchhHHHHHHHHHHHHHHHHHhccc----CcEEeeeecCcccchHHh
Confidence                                   33445899999999999999999999987    788999999999998753

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-32  Score=226.50  Aligned_cols=173  Identities=17%  Similarity=0.160  Sum_probs=144.1

Q ss_pred             CCCC--CCcHHHHHHHHHHHhcCCeEEEEec---CcchhHHHHHhh-----hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGA--NKGIGYGIVKGLIQQFDGIIYLTAR---DASRGQEALEKL-----QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~--s~giG~~~a~~la~~g~~~vi~~~r---~~~~~~~~~~~~-----~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||  ++|||+++|++|+++| ..|++.+|   +.+.+++..+++     ..+|++|+++++++++++.+.++++|++|
T Consensus        11 ItGas~~~GIG~a~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   89 (260)
T PRK06997         11 ITGLLSNRSIAYGIAKACKREG-AELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGLDGLV   89 (260)
T ss_pred             EeCCCCCCcHHHHHHHHHHHCC-CeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCCcEEE
Confidence            7996  6899999999999995 56666544   334444433322     23899999999999999999999999999


Q ss_pred             EccCCcccc----C-CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          71 NNAAIAFKV----N-SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        71 ~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||.....    + +.+.+.++|+++|++|+.++++++++++|+|+++|+||++||..+..                  
T Consensus        90 nnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~------------------  151 (260)
T PRK06997         90 HSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER------------------  151 (260)
T ss_pred             EccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc------------------
Confidence            999986432    2 34567889999999999999999999999998789999999988732                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                            +.++...|++||+|+.+|+++++.|+.++    ||+||+|+||+++|++..
T Consensus       152 ----------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrVn~i~PG~v~T~~~~  198 (260)
T PRK06997        152 ----------------------VVPNYNTMGLAKASLEASVRYLAVSLGPK----GIRANGISAGPIKTLAAS  198 (260)
T ss_pred             ----------------------CCCCcchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCccccchhc
Confidence                                  33455789999999999999999999987    799999999999998754

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=3e-32  Score=224.87  Aligned_cols=183  Identities=21%  Similarity=0.246  Sum_probs=154.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+ + +..|++++|+.+++++..++++          .+|++|+++++++++++.+.++++|++|
T Consensus         5 ItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv   82 (246)
T PRK05599          5 ILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAV   82 (246)
T ss_pred             EEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999 5 5788889999888877655542          2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||+|...+.+..+.+.+.+.+++++|+.+++.+++.++|.|++   +|+||++||..+..                    
T Consensus        83 ~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--------------------  142 (246)
T PRK05599         83 VAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR--------------------  142 (246)
T ss_pred             EecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc--------------------
Confidence            9999875555556677788899999999999999999998853   48999999998843                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCC----C
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP----L  223 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~----~  223 (230)
                                          +.++...|+++|+|+.+|+++++.|+...    ||+||+|+||+++|+|.....+    .
T Consensus       143 --------------------~~~~~~~Y~asKaa~~~~~~~la~el~~~----~I~v~~v~PG~v~T~~~~~~~~~~~~~  198 (246)
T PRK05599        143 --------------------ARRANYVYGSTKAGLDAFCQGLADSLHGS----HVRLIIARPGFVIGSMTTGMKPAPMSV  198 (246)
T ss_pred             --------------------CCcCCcchhhHHHHHHHHHHHHHHHhcCC----CceEEEecCCcccchhhcCCCCCCCCC
Confidence                                33456899999999999999999999876    7899999999999998654322    3


Q ss_pred             CccccC
Q psy7994         224 TIDQDN  229 (230)
Q Consensus       224 ~~~~~a  229 (230)
                      +||++|
T Consensus       199 ~pe~~a  204 (246)
T PRK05599        199 YPRDVA  204 (246)
T ss_pred             CHHHHH
Confidence            666654

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=4.7e-32  Score=229.54  Aligned_cols=173  Identities=14%  Similarity=0.174  Sum_probs=144.0

Q ss_pred             CCCC--CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------------------cccC--CC------
Q psy7994           1 VTGA--NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------------------KLDI--LD------   48 (230)
Q Consensus         1 ItG~--s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------------------~~D~--s~------   48 (230)
                      ||||  |+|||+++|+.|+++| .+|++ +|+.++++.....+.                      .+|+  ++      
T Consensus        14 ITGa~~s~GIG~a~A~~la~~G-a~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   91 (303)
T PLN02730         14 IAGVADDNGYGWAIAKALAAAG-AEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPE   91 (303)
T ss_pred             EeCCCCCCcHHHHHHHHHHHCC-CEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCch
Confidence            7999  8999999999999994 56666 666666555432221                      2577  33      


Q ss_pred             ------------HHHHHHHHHHHHhhcCCCcEEEEccCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC
Q psy7994          49 ------------KNSIKALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH  114 (230)
Q Consensus        49 ------------~~~v~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~  114 (230)
                                  +++++++++++.+.+|+||+||||||...  ..++.+.+.+.|+++|++|+.|+++++++++|.|+++
T Consensus        92 ~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~  171 (303)
T PLN02730         92 DVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPG  171 (303)
T ss_pred             hhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence                        45899999999999999999999998643  3678888999999999999999999999999999888


Q ss_pred             ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCC-chhhHHHHHHHHHHHHHHHhh
Q psy7994         115 GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHALL  193 (230)
Q Consensus       115 g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~  193 (230)
                      |+||++||..+..                                        +.+++ ..|++||+|+.+|+++|+.|+
T Consensus       172 G~II~isS~a~~~----------------------------------------~~p~~~~~Y~asKaAl~~l~~~la~El  211 (303)
T PLN02730        172 GASISLTYIASER----------------------------------------IIPGYGGGMSSAKAALESDTRVLAFEA  211 (303)
T ss_pred             CEEEEEechhhcC----------------------------------------CCCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            9999999988743                                        22223 479999999999999999999


Q ss_pred             hh-hhccCCeEEEEecCCccccCCCCC
Q psy7994         194 SQ-DAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       194 ~~-~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                      .+ .    |||||+|+||+++|+|...
T Consensus       212 ~~~~----gIrVn~V~PG~v~T~~~~~  234 (303)
T PLN02730        212 GRKY----KIRVNTISAGPLGSRAAKA  234 (303)
T ss_pred             CcCC----CeEEEEEeeCCccCchhhc
Confidence            85 5    7999999999999999754

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-32  Score=224.42  Aligned_cols=174  Identities=25%  Similarity=0.347  Sum_probs=147.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||++|||++++++|+++ +..|++.+|+.. ......+..      ..+|++++++++++++++.+.++++|++||||
T Consensus        13 ItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~a   91 (251)
T PRK12481         13 ITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNA   91 (251)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            7999999999999999999 556777777542 222222221      23899999999999999999999999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |...+.++.+.+.++|++++++|+.+++.++++++|.|++   +|+||++||..++.                       
T Consensus        92 g~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------------------  148 (251)
T PRK12481         92 GIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ-----------------------  148 (251)
T ss_pred             CcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC-----------------------
Confidence            9977777788899999999999999999999999998853   37999999988743                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       +.++...|++||+++++|+++++.++.+.    ||+||+|+||+++|++...
T Consensus       149 -----------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~----girvn~v~PG~v~t~~~~~  196 (251)
T PRK12481        149 -----------------GGIRVPSYTASKSAVMGLTRALATELSQY----NINVNAIAPGYMATDNTAA  196 (251)
T ss_pred             -----------------CCCCCcchHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCCCccCchhh
Confidence                             33445799999999999999999999987    7999999999999998654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.6e-32  Score=224.00  Aligned_cols=174  Identities=19%  Similarity=0.213  Sum_probs=143.0

Q ss_pred             CCCC--CCcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHhh-----hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGA--NKGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEKL-----QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~--s~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~~-----~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||  ++|||+++|+.|+++ +.+|++++|...   .+++...+.     ..+|++|+++++++++++.+++++||++|
T Consensus        11 ITGa~~~~GIG~a~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lV   89 (261)
T PRK08690         11 ITGMISERSIAYGIAKACREQ-GAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLV   89 (261)
T ss_pred             EECCCCCCcHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcEEE
Confidence            7997  689999999999999 457777766532   222222211     13899999999999999999999999999


Q ss_pred             EccCCcccc----C-CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          71 NNAAIAFKV----N-SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        71 ~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      ||||+....    + +.+.+.+.|++++++|+.++++++++++|.|++ +++||++||.++..                 
T Consensus        90 nnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~-----------------  152 (261)
T PRK08690         90 HSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR-----------------  152 (261)
T ss_pred             ECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc-----------------
Confidence            999986432    2 345677889999999999999999999998864 48999999988743                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                             +.+++..|+++|+|+.+|+++++.++.+.    ||+||+|+||+++|++...
T Consensus       153 -----------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~----gIrVn~i~PG~v~T~~~~~  200 (261)
T PRK08690        153 -----------------------AIPNYNVMGMAKASLEAGIRFTAACLGKE----GIRCNGISAGPIKTLAASG  200 (261)
T ss_pred             -----------------------CCCCcccchhHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcccchhhhc
Confidence                                   34456899999999999999999999997    7999999999999998543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-31  Score=222.17  Aligned_cols=173  Identities=17%  Similarity=0.225  Sum_probs=145.6

Q ss_pred             CCCC--CCcHHHHHHHHHHHhcCCeEEEEecCc--chhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGA--NKGIGYGIVKGLIQQFDGIIYLTARDA--SRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~--s~giG~~~a~~la~~g~~~vi~~~r~~--~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||  ++|||++++++|+++ +..|++.+|+.  +.++...+++      ..+|++|+++++++++++.+.++++|++|
T Consensus        12 ItGa~~s~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li   90 (256)
T PRK07889         12 VTGVITDSSIAFHVARVAQEQ-GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGLDGVV   90 (256)
T ss_pred             EeCCCCcchHHHHHHHHHHHC-CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEE
Confidence            7999  899999999999999 55788887754  3344444433      23899999999999999999999999999


Q ss_pred             EccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||+...    .++.+.+.++|++++++|+.++++++++++|.|+++|+||++++....                    
T Consensus        91 ~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~--------------------  150 (256)
T PRK07889         91 HSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV--------------------  150 (256)
T ss_pred             EccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc--------------------
Confidence            99998643    346677889999999999999999999999999888999999864321                    


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                           +.+.+..|++||+|+.+|+++++.|+.+.    ||+||+|+||+++|+|.+.
T Consensus       151 ---------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrvn~v~PG~v~T~~~~~  198 (256)
T PRK07889        151 ---------------------AWPAYDWMGVAKAALESTNRYLARDLGPR----GIRVNLVAAGPIRTLAAKA  198 (256)
T ss_pred             ---------------------cCCccchhHHHHHHHHHHHHHHHHHhhhc----CeEEEeeccCcccChhhhc
Confidence                                 23345789999999999999999999987    7999999999999998653

>PRK08589 short chain dehydrogenase; Validated

Probab=99.98  E-value=1.6e-31  Score=223.54  Aligned_cols=173  Identities=24%  Similarity=0.334  Sum_probs=150.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++ +..|++++|+ +.++...+++.         .+|++++++++.+++++.+.++++|+|||
T Consensus        11 ItGas~gIG~aia~~l~~~-G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~   88 (272)
T PRK08589         11 ITGASTGIGQASAIALAQE-GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFN   88 (272)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEE
Confidence            7999999999999999999 5688888888 66666555543         28999999999999999999999999999


Q ss_pred             ccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||... ..++.+.+.+.|++++++|+.+++.++++++|.|++ +++||++||..+..                      
T Consensus        89 ~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  146 (272)
T PRK08589         89 NAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQA----------------------  146 (272)
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcC----------------------
Confidence            999864 355667888999999999999999999999999864 48999999988743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|++||+|+++|+++++.++.+.    ||+||+|+||+++|++...
T Consensus       147 ------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~----gI~v~~v~PG~v~T~~~~~  194 (272)
T PRK08589        147 ------------------ADLYRSGYNAAKGAVINFTKSIAIEYGRD----GIRANAIAPGTIETPLVDK  194 (272)
T ss_pred             ------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcccCchhhh
Confidence                              23345899999999999999999999887    7999999999999998654

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.6e-31  Score=225.26  Aligned_cols=172  Identities=25%  Similarity=0.303  Sum_probs=148.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc---------chhHHHHHhhh---------cccCCCHHHHHHHHHHHHhh
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA---------SRGQEALEKLQ---------KLDILDKNSIKALHDHLEAE   62 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~---------~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~   62 (230)
                      ||||++|||+++++.|+++| ..|++++++.         +.++...+++.         .+|++|+++++++++++.+.
T Consensus        11 ITGas~GIG~aia~~la~~G-~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (286)
T PRK07791         11 VTGAGGGIGRAHALAFAAEG-ARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVET   89 (286)
T ss_pred             EECCCchHHHHHHHHHHHCC-CEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHh
Confidence            79999999999999999995 5677776654         55555555442         28999999999999999999


Q ss_pred             cCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCccccccchHH
Q psy7994          63 HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        63 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      +++||+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++        .|+||++||..+..       
T Consensus        90 ~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-------  162 (286)
T PRK07791         90 FGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ-------  162 (286)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc-------
Confidence            999999999999977677888899999999999999999999999998853        26999999988843       


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                                       +.++...|++||+|+.+|+++++.|+.+.    ||+||+|+|| +.|
T Consensus       163 ---------------------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrVn~v~Pg-~~T  204 (286)
T PRK07791        163 ---------------------------------GSVGQGNYSAAKAGIAALTLVAAAELGRY----GVTVNAIAPA-ART  204 (286)
T ss_pred             ---------------------------------CCCCchhhHHHHHHHHHHHHHHHHHHHHh----CeEEEEECCC-CCC
Confidence                                             44456899999999999999999999987    7999999999 899


Q ss_pred             CCCC
Q psy7994         215 DMSS  218 (230)
Q Consensus       215 ~~~~  218 (230)
                      +|..
T Consensus       205 ~~~~  208 (286)
T PRK07791        205 RMTE  208 (286)
T ss_pred             Ccch
Confidence            8854

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.8e-31  Score=220.45  Aligned_cols=174  Identities=26%  Similarity=0.360  Sum_probs=147.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhh----cC--
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAE----HG--   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~----~~--   64 (230)
                      ||||++|||+++++.|+++|+ .|++. .++.+.++....++.         .+|+++.++++.+++++.+.    ++  
T Consensus         9 ItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~   87 (252)
T PRK12747          9 VTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGST   87 (252)
T ss_pred             EeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCC
Confidence            799999999999999999954 55554 456666655544432         27999999999999988753    34  


Q ss_pred             CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          65 GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        65 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      ++|+||||||.....++.+.+.+.|++++++|+.|+++++++++|.|++.++||++||..+..                 
T Consensus        88 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------------  150 (252)
T PRK12747         88 KFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI-----------------  150 (252)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc-----------------
Confidence            899999999987666677888899999999999999999999999998889999999998843                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                             +.++...|++||+++++++++++.++.+.    ||+||+|+||+++|++...
T Consensus       151 -----------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~----girvn~v~Pg~v~t~~~~~  198 (252)
T PRK12747        151 -----------------------SLPDFIAYSMTKGAINTMTFTLAKQLGAR----GITVNAILPGFIKTDMNAE  198 (252)
T ss_pred             -----------------------CCCCchhHHHHHHHHHHHHHHHHHHHhHc----CCEEEEEecCCccCchhhh
Confidence                                   33455899999999999999999999887    7889999999999998653

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-31  Score=222.35  Aligned_cols=174  Identities=24%  Similarity=0.327  Sum_probs=152.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++++.|+++ +..|++++|+.+.+++..+++.           .+|++++++++.+++++.+.++++|+|
T Consensus        12 VtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   90 (260)
T PRK07063         12 VTGAAQGIGAAIARAFARE-GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVL   90 (260)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEE
Confidence            7999999999999999999 5578889998887776655542           289999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||.....+..+.+.++|++++++|+.+++.++++++|.|++  .++||++||..+..                    
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  150 (260)
T PRK07063         91 VNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK--------------------  150 (260)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc--------------------
Confidence            99999876666667888999999999999999999999999864  37999999987743                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                          +.++...|+++|+++.+++++++.++++.    ||+||+|+||+++|++...
T Consensus       151 --------------------~~~~~~~Y~~sKaa~~~~~~~la~el~~~----gIrvn~v~PG~v~t~~~~~  198 (260)
T PRK07063        151 --------------------IIPGCFPYPVAKHGLLGLTRALGIEYAAR----NVRVNAIAPGYIETQLTED  198 (260)
T ss_pred             --------------------CCCCchHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEeeCCccChhhhh
Confidence                                34455899999999999999999999887    7999999999999998643

>KOG0725|consensus

Probab=99.98  E-value=1.6e-31  Score=222.82  Aligned_cols=171  Identities=27%  Similarity=0.323  Sum_probs=149.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------------ccCCCHHHHHHHHHHHHhh-cCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDILDKNSIKALHDHLEAE-HGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------------~D~s~~~~v~~~~~~~~~~-~~~id   67 (230)
                      |||+++|||+++|++|+++ +.+|++++|+++.+++....+..            ||++++++++.++++..+. +|+||
T Consensus        13 VTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gkid   91 (270)
T KOG0725|consen   13 VTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKID   91 (270)
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999 77999999999998887766542            8999999999999999999 79999


Q ss_pred             EEEEccCCcccc-CCCCCChhHHHHHHHHhhhhH-HHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          68 VLVNNAAIAFKV-NSSEPFGSQALHTMRTNYFAL-IDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        68 ~lv~~ag~~~~~-~~~~~~~~~~~~~~~~n~~g~-~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ++|||||..... ++.+.+++.|++++++|+.|+ +.+.+.+.+++++  ++.|+++||.++..                
T Consensus        92 iLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~----------------  155 (270)
T KOG0725|consen   92 ILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG----------------  155 (270)
T ss_pred             EEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc----------------
Confidence            999999998755 689999999999999999965 5555555566654  47999999988843                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCC-chhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                              +.++. ..|+++|+|+++|+|++|.||.+.    |||||+|+||++.|++
T Consensus       156 ------------------------~~~~~~~~Y~~sK~al~~ltr~lA~El~~~----gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  156 ------------------------PGPGSGVAYGVSKAALLQLTRSLAKELAKH----GIRVNSVSPGLVKTSL  201 (270)
T ss_pred             ------------------------CCCCCcccchhHHHHHHHHHHHHHHHHhhc----CcEEEEeecCcEeCCc
Confidence                                    22233 799999999999999999999998    7889999999999998

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.6e-31  Score=220.98  Aligned_cols=176  Identities=23%  Similarity=0.309  Sum_probs=152.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.+++++|+++ +..|++++|+.++++...+++.         .+|++++++++++++++.+.++++|+|||
T Consensus        14 VtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   92 (253)
T PRK05867         14 ITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVC   92 (253)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 5688889999887777665543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |+|.....++.+.+.+.|++++++|+.++++++++++|.|.+   .++||++||..+....                   
T Consensus        93 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------------  153 (253)
T PRK05867         93 NAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN-------------------  153 (253)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC-------------------
Confidence            999877777778889999999999999999999999998854   3689999998763210                   


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         ...+...|+++|+|+++|+++++.++.+.    ||+||+|+||+++|++...
T Consensus       154 -------------------~~~~~~~Y~asKaal~~~~~~la~e~~~~----gI~vn~i~PG~v~t~~~~~  201 (253)
T PRK05867        154 -------------------VPQQVSHYCASKAAVIHLTKAMAVELAPH----KIRVNSVSPGYILTELVEP  201 (253)
T ss_pred             -------------------CCCCccchHHHHHHHHHHHHHHHHHHhHh----CeEEEEeecCCCCCccccc
Confidence                               01123689999999999999999999987    7999999999999998653

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.98  E-value=4.4e-32  Score=222.97  Aligned_cols=171  Identities=30%  Similarity=0.408  Sum_probs=152.3

Q ss_pred             CCC--CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhc-CCCcEEEE
Q psy7994           3 GAN--KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEH-GGVDVLVN   71 (230)
Q Consensus         3 G~s--~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~-~~id~lv~   71 (230)
                      |++  +|||+++|+.|+++ +..|++++|+.++++...+++.+        +|++++++++.+++++.+.+ ++||+|||
T Consensus         1 g~~~s~GiG~aia~~l~~~-Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEE-GANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHT-TEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  99999999999999 77899999999886555444433        99999999999999999999 99999999


Q ss_pred             ccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          72 NAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        72 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |+|...+    .++.+.+.+.|++.+++|+.+++.++++++|+|+++++||++||..+..                    
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~--------------------  139 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR--------------------  139 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS--------------------
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc--------------------
Confidence            9998765    5667788899999999999999999999999999999999999987733                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhh-hhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQ-DAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~-~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.+++..|+++|+|+++|++++|.+|++ +    |||||+|+||+++|++..
T Consensus       140 --------------------~~~~~~~y~~sKaal~~l~r~lA~el~~~~----gIrVN~V~pG~i~t~~~~  187 (241)
T PF13561_consen  140 --------------------PMPGYSAYSASKAALEGLTRSLAKELAPKK----GIRVNAVSPGPIETPMTE  187 (241)
T ss_dssp             --------------------BSTTTHHHHHHHHHHHHHHHHHHHHHGGHG----TEEEEEEEESSBSSHHHH
T ss_pred             --------------------cCccchhhHHHHHHHHHHHHHHHHHhcccc----Ceeeeeecccceeccchh
Confidence                                4556689999999999999999999999 8    899999999999998743

...

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.7e-31  Score=220.91  Aligned_cols=173  Identities=27%  Similarity=0.363  Sum_probs=153.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.           .+|++|+++++++++++.+.++++|+|
T Consensus        13 ItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   91 (265)
T PRK07062         13 VTGGSSGIGLATVELLLEA-GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDML   91 (265)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            7999999999999999999 5578899999887766544432           279999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||.....++.+.+.+.|++.+++|+.+++.+++.++|.|++  .++||++||..+..                    
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  151 (265)
T PRK07062         92 VNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ--------------------  151 (265)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC--------------------
Confidence            99999877677888889999999999999999999999999975  48999999998843                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|+++|+++.+++++++.++.+.    ||+||+|+||+++|++..
T Consensus       152 --------------------~~~~~~~y~asKaal~~~~~~la~e~~~~----gi~v~~i~PG~v~t~~~~  198 (265)
T PRK07062        152 --------------------PEPHMVATSAARAGLLNLVKSLATELAPK----GVRVNSILLGLVESGQWR  198 (265)
T ss_pred             --------------------CCCCchHhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCccccchhh
Confidence                                33455899999999999999999999987    799999999999999854

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.2e-31  Score=228.49  Aligned_cols=174  Identities=25%  Similarity=0.337  Sum_probs=154.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+++++++..+++.         .+|++|+++++++++++.+.++++|++||
T Consensus        12 ITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn   90 (330)
T PRK06139         12 ITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVN   90 (330)
T ss_pred             EcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 5578899999988887766553         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||+++|..+..                      
T Consensus        91 nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~----------------------  148 (330)
T PRK06139         91 NVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA----------------------  148 (330)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC----------------------
Confidence            999987778888999999999999999999999999999964  48999999988743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.+....|++||+++.+|+++|+.|+...   .||+|++|+||+++|++..
T Consensus       149 ------------------~~p~~~~Y~asKaal~~~~~sL~~El~~~---~gI~V~~v~Pg~v~T~~~~  196 (330)
T PRK06139        149 ------------------AQPYAAAYSASKFGLRGFSEALRGELADH---PDIHVCDVYPAFMDTPGFR  196 (330)
T ss_pred             ------------------CCCCchhHHHHHHHHHHHHHHHHHHhCCC---CCeEEEEEecCCccCcccc
Confidence                              34455899999999999999999999753   2689999999999999864

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.1e-31  Score=225.38  Aligned_cols=175  Identities=23%  Similarity=0.318  Sum_probs=144.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc----------chhHHHHHhhh---------cccCCCHHHHHHHHHHHHh
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA----------SRGQEALEKLQ---------KLDILDKNSIKALHDHLEA   61 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~----------~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~   61 (230)
                      ||||++|||+++++.|+++| ..|++++|+.          ++++...+.+.         .+|++++++++++++++.+
T Consensus        13 ITGgs~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   91 (305)
T PRK08303         13 VAGATRGAGRGIAVELGAAG-ATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDR   91 (305)
T ss_pred             EeCCCchHHHHHHHHHHHCC-CEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            79999999999999999994 5788888873          34444433332         3899999999999999999


Q ss_pred             hcCCCcEEEEcc-CCcc----ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHH
Q psy7994          62 EHGGVDVLVNNA-AIAF----KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        62 ~~~~id~lv~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      .+++||++|||+ |...    ..++.+.+.+.|++++++|+.+++.++++++|.|++  +|+||++||..+...+     
T Consensus        92 ~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~-----  166 (305)
T PRK08303         92 EQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNA-----  166 (305)
T ss_pred             HcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccC-----
Confidence            999999999999 7531    245667788999999999999999999999999954  4899999997663211     


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                                      .+.++...|++||+|+.+|+++|+.|+.+.    |||||+|+||+++|
T Consensus       167 --------------------------------~~~~~~~~Y~asKaal~~lt~~La~el~~~----gIrVn~v~PG~v~T  210 (305)
T PRK08303        167 --------------------------------THYRLSVFYDLAKTSVNRLAFSLAHELAPH----GATAVALTPGWLRS  210 (305)
T ss_pred             --------------------------------cCCCCcchhHHHHHHHHHHHHHHHHHhhhc----CcEEEEecCCcccc
Confidence                                            012234789999999999999999999987    78899999999999


Q ss_pred             CCC
Q psy7994         215 DMS  217 (230)
Q Consensus       215 ~~~  217 (230)
                      +|.
T Consensus       211 ~~~  213 (305)
T PRK08303        211 EMM  213 (305)
T ss_pred             HHH
Confidence            984

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-31  Score=218.53  Aligned_cols=176  Identities=25%  Similarity=0.261  Sum_probs=152.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.+++++|+++ +..|++++|++++++...+++.         .+|++++++++++++++.+.++++|+|||
T Consensus        11 ItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   89 (254)
T PRK07478         11 ITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFN   89 (254)
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 4578889999888777665543         28999999999999999999999999999


Q ss_pred             ccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||... ..++.+.+.++|++++++|+.+++.++++++|.|++  .++||++||..+..                     
T Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~---------------------  148 (254)
T PRK07478         90 NAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHT---------------------  148 (254)
T ss_pred             CCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhc---------------------
Confidence            999853 356677888999999999999999999999998864  37999999987731                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        .+.++...|++||++++.++++++.++.+.    ||+||+|+||+++|++.+..
T Consensus       149 ------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  198 (254)
T PRK07478        149 ------------------AGFPGMAAYAASKAGLIGLTQVLAAEYGAQ----GIRVNALLPGGTDTPMGRAM  198 (254)
T ss_pred             ------------------cCCCCcchhHHHHHHHHHHHHHHHHHHhhc----CEEEEEEeeCcccCcccccc
Confidence                              123455899999999999999999999987    79999999999999986543

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.3e-31  Score=213.95  Aligned_cols=168  Identities=20%  Similarity=0.199  Sum_probs=147.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcC-CCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHG-GVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~-~id~lv   70 (230)
                      ||||++|||++++++|+++ +.+|++.+|+.+++++..+++..         +|++++++++++++++.+.++ +||++|
T Consensus        10 VtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li   88 (227)
T PRK08862         10 ITSAGSVLGRTISCHFARL-GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLV   88 (227)
T ss_pred             EECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence            7999999999999999999 56788899999888777665532         899999999999999999999 999999


Q ss_pred             EccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||+|... +.++.+.+.+.|.+.+++|+.+++.+++.++|+|++   +|+||++||..+.                    
T Consensus        89 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------------------  148 (227)
T PRK08862         89 NNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------------------  148 (227)
T ss_pred             ECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------------
Confidence            9998643 456777888999999999999999999999999853   4899999997552                    


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                             ++...|+++|+++.+|+++++.|+.+.    ||+||+|+||+++|+.
T Consensus       149 -----------------------~~~~~Y~asKaal~~~~~~la~el~~~----~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        149 -----------------------QDLTGVESSNALVSGFTHSWAKELTPF----NIRVGGVVPSIFSANG  191 (227)
T ss_pred             -----------------------CCcchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCcCcCCC
Confidence                                   134789999999999999999999987    7889999999999984

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.3e-31  Score=222.22  Aligned_cols=174  Identities=22%  Similarity=0.296  Sum_probs=155.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||+++++.|+++ +..|++++|+.++++...+++..        +|++|+++++.+++++.+.++++|+||||
T Consensus        14 ItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~n   92 (296)
T PRK05872         14 VTGAARGIGAELARRLHAR-GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVAN   92 (296)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            7999999999999999999 45889999998888777665531        89999999999999999999999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      +|.....++.+.+.+.|++++++|+.|+++++++++|.|. +.|+||++||.++..                        
T Consensus        93 AG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~------------------------  148 (296)
T PRK05872         93 AGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFA------------------------  148 (296)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcC------------------------
Confidence            9998777888899999999999999999999999999885 458999999988843                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                      +.++...|++||+++++|+++++.++...    ||+|++|+||+++|+|.+.
T Consensus       149 ----------------~~~~~~~Y~asKaal~~~~~~l~~e~~~~----gi~v~~v~Pg~v~T~~~~~  196 (296)
T PRK05872        149 ----------------AAPGMAAYCASKAGVEAFANALRLEVAHH----GVTVGSAYLSWIDTDLVRD  196 (296)
T ss_pred             ----------------CCCCchHHHHHHHHHHHHHHHHHHHHHHH----CcEEEEEecCcccchhhhh
Confidence                            34456899999999999999999999987    7889999999999998654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=7.3e-31  Score=218.07  Aligned_cols=174  Identities=20%  Similarity=0.218  Sum_probs=146.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEe-cCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~-r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++|. .|++++ ++.+.++...+.+.          .+|++|+++++++++++.+.++++|++
T Consensus        13 ItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   91 (260)
T PRK08416         13 ISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFF   91 (260)
T ss_pred             EeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEE
Confidence            799999999999999999954 566654 45555555444332          289999999999999999999999999


Q ss_pred             EEccCCcc------ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhh
Q psy7994          70 VNNAAIAF------KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLH  141 (230)
Q Consensus        70 v~~ag~~~------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~  141 (230)
                      |||||...      ..++.+.+.+.|++++++|+.+++.+++.++|.|++  .++||++||..+..              
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  157 (260)
T PRK08416         92 ISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV--------------  157 (260)
T ss_pred             EECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc--------------
Confidence            99998642      244566778999999999999999999999999864  37999999987733              


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         142 EIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                                +.+++..|++||+++++++++|+.++.+.    ||+||+|+||+++|++.+.
T Consensus       158 --------------------------~~~~~~~Y~asK~a~~~~~~~la~el~~~----gi~v~~v~PG~i~T~~~~~  205 (260)
T PRK08416        158 --------------------------YIENYAGHGTSKAAVETMVKYAATELGEK----NIRVNAVSGGPIDTDALKA  205 (260)
T ss_pred             --------------------------CCCCcccchhhHHHHHHHHHHHHHHhhhh----CeEEEEEeeCcccChhhhh
Confidence                                      33455899999999999999999999987    7999999999999998553

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-30  Score=218.56  Aligned_cols=174  Identities=22%  Similarity=0.266  Sum_probs=153.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++| ..|++.+|+.+.+++..+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        11 VTGas~gIG~ala~~La~~G-~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~   89 (275)
T PRK05876         11 ITGGASGIGLATGTEFARRG-ARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFS   89 (275)
T ss_pred             EeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79999999999999999994 578888898887776655543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.....++.+.+.+.|++++++|+.|++.++++++|.|.+   +|+||++||.+++.                     
T Consensus        90 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~---------------------  148 (275)
T PRK05876         90 NAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV---------------------  148 (275)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc---------------------
Confidence            999987778888999999999999999999999999998853   47999999988844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|+++|+++.+|+++++.++...    ||+|++|+||+++|++..+
T Consensus       149 -------------------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~  196 (275)
T PRK05876        149 -------------------PNAGLGAYGVAKYGVVGLAETLAREVTAD----GIGVSVLCPMVVETNLVAN  196 (275)
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEeCccccccccc
Confidence                               34456899999999999999999999876    7889999999999998643

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=215.60  Aligned_cols=173  Identities=23%  Similarity=0.213  Sum_probs=150.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||++++++|+++| ..|++++|+++.++...+++.        .+|++|+++++++++++.+.++++|+||||
T Consensus         5 ItGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~n   83 (259)
T PRK08340          5 VTASSRGIGFNVARELLKKG-ARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWN   83 (259)
T ss_pred             EEcCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            79999999999999999995 578889999887776655543        289999999999999999999999999999


Q ss_pred             cCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          73 AAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        73 ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      +|...  +.++.+.+.++|.+.+.+|+.+++++++.++|.|.   ++|+||++||.++..                    
T Consensus        84 aG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~--------------------  143 (259)
T PRK08340         84 AGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE--------------------  143 (259)
T ss_pred             CCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC--------------------
Confidence            99753  34466778889999999999999999999999764   248999999988743                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|+++|+++.+++++++.++.+.    ||+||+|+||+++|++.+
T Consensus       144 --------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~----gI~v~~v~pG~v~t~~~~  190 (259)
T PRK08340        144 --------------------PMPPLVLADVTRAGLVQLAKGVSRTYGGK----GIRAYTVLLGSFDTPGAR  190 (259)
T ss_pred             --------------------CCCCchHHHHHHHHHHHHHHHHHHHhCCC----CEEEEEeccCcccCccHH
Confidence                                34456899999999999999999999987    799999999999999864

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=215.11  Aligned_cols=175  Identities=29%  Similarity=0.334  Sum_probs=148.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++| ..|++.+|+.+ .++...+.+.         .+|++|+++++++++++.+.++++|+||
T Consensus        13 VtG~s~gIG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   91 (254)
T PRK06114         13 VTGAGSGIGQRIAIGLAQAG-ADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAV   91 (254)
T ss_pred             EECCCchHHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999999999999999995 57777777653 3444444332         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||+|.....++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+....                   
T Consensus        92 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------------  152 (254)
T PRK06114         92 NAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN-------------------  152 (254)
T ss_pred             ECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-------------------
Confidence            9999877677778889999999999999999999999998854  4799999998885421                   


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +..+...|+++|+|+++++++++.++.+.    ||+||+|+||+++|+|..
T Consensus       153 -------------------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~----gi~v~~v~PG~i~t~~~~  199 (254)
T PRK06114        153 -------------------RGLLQAHYNASKAGVIHLSKSLAMEWVGR----GIRVNSISPGYTATPMNT  199 (254)
T ss_pred             -------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEeecCccCcccc
Confidence                               11224789999999999999999999987    789999999999999865

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-30  Score=214.72  Aligned_cols=173  Identities=24%  Similarity=0.301  Sum_probs=150.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++.      .+|++++++++++++++.+.++++|+||||+|
T Consensus        11 ItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag   89 (261)
T PRK08265         11 VTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILVNLAC   89 (261)
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            7999999999999999999 5588899998877776655532      38999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      ...... .+.+.+.|++++++|+.+++.++++++|.|+ +.++||++||..+..                          
T Consensus        90 ~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~--------------------------  142 (261)
T PRK08265         90 TYLDDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF--------------------------  142 (261)
T ss_pred             CCCCCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc--------------------------
Confidence            864433 3567899999999999999999999999884 558999999988743                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                    +.++...|+++|+++..++++++.++.+.    ||+||+|+||+++|++...
T Consensus       143 --------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~~~t~~~~~  190 (261)
T PRK08265        143 --------------AQTGRWLYPASKAAIRQLTRSMAMDLAPD----GIRVNSVSPGWTWSRVMDE  190 (261)
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHhccc----CEEEEEEccCCccChhhhh
Confidence                          34455899999999999999999999886    7999999999999998643

>PRK06484 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.6e-30  Score=235.77  Aligned_cols=174  Identities=28%  Similarity=0.344  Sum_probs=154.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++| ..|++++|++++++...+.+.      .+|++|+++++++++++.+.+++||+||||||
T Consensus       274 ItGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg  352 (520)
T PRK06484        274 ITGGARGIGRAVADRFAAAG-DRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAG  352 (520)
T ss_pred             EECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            79999999999999999994 588889999888777665442      28999999999999999999999999999999


Q ss_pred             Ccc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          75 IAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        75 ~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      ... ..++.+.+.+.|++++++|+.|+++++++++|.|++.|+||++||.++..                          
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------------  406 (520)
T PRK06484        353 IAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL--------------------------  406 (520)
T ss_pred             CcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC--------------------------
Confidence            863 35677788999999999999999999999999997779999999998843                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                    +.++...|+++|+++++|+++++.++.+.    ||+||+|+||+++|+|...
T Consensus       407 --------------~~~~~~~Y~asKaal~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~  454 (520)
T PRK06484        407 --------------ALPPRNAYCASKAAVTMLSRSLACEWAPA----GIRVNTVAPGYIETPAVLA  454 (520)
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEeCCccCchhhh
Confidence                          44566899999999999999999999987    7999999999999998653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-30  Score=212.27  Aligned_cols=174  Identities=28%  Similarity=0.404  Sum_probs=153.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        14 ItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   92 (254)
T PRK08085         14 ITGSAQGIGFLLATGLAEY-GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLIN   92 (254)
T ss_pred             EECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 5688889999887776655543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|.....++.+.+.++|++++++|+.+++.+++++++.|++  .++||++||..+..                      
T Consensus        93 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------------  150 (254)
T PRK08085         93 NAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL----------------------  150 (254)
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc----------------------
Confidence            999876677778889999999999999999999999998853  48999999987733                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|+++|+++++++++++.++.+.    ||++|+|+||+++|++...
T Consensus       151 ------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~pG~~~t~~~~~  198 (254)
T PRK08085        151 ------------------GRDTITPYAASKGAVKMLTRGMCVELARH----NIQVNGIAPGYFKTEMTKA  198 (254)
T ss_pred             ------------------CCCCCcchHHHHHHHHHHHHHHHHHHHhh----CeEEEEEEeCCCCCcchhh
Confidence                              34456899999999999999999999987    7999999999999998654

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-30  Score=215.15  Aligned_cols=175  Identities=27%  Similarity=0.360  Sum_probs=155.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+||||++++++|+++ +..|++.+|++++++.....+.     .+|++|+++++++++++.+.++++|++|||+|.
T Consensus        10 VtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~   88 (273)
T PRK07825         10 ITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGV   88 (273)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            7999999999999999999 5678888999888776655443     389999999999999999999999999999999


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      ....++.+.+.+.+++++++|+.|++.+++.++|.|+++  ++||++||..+..                          
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------------  142 (273)
T PRK07825         89 MPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI--------------------------  142 (273)
T ss_pred             CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC--------------------------
Confidence            877778888899999999999999999999999998643  7999999998843                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                    +.++...|+++|+++.+++++++.++...    |+++++|+||+++|++....
T Consensus       143 --------------~~~~~~~Y~asKaa~~~~~~~l~~el~~~----gi~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        143 --------------PVPGMATYCASKHAVVGFTDAARLELRGT----GVHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             --------------CCCCCcchHHHHHHHHHHHHHHHHHhhcc----CcEEEEEeCCcCcchhhccc
Confidence                          44556899999999999999999999876    78899999999999986543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.97  E-value=1.9e-30  Score=215.43  Aligned_cols=171  Identities=20%  Similarity=0.200  Sum_probs=148.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++.+|+.....  .-.+..+|++|+++++++++++.+.++++|+||||||.....+
T Consensus        11 ItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~   87 (258)
T PRK06398         11 VTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPSYN--DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGA   87 (258)
T ss_pred             EECCCchHHHHHHHHHHHC-CCeEEEEeCCccccC--ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            7999999999999999999 457888888765432  1123348999999999999999999999999999999977677


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                               
T Consensus        88 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------------------------  136 (258)
T PRK06398         88 IHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA-------------------------------  136 (258)
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc-------------------------------
Confidence            888899999999999999999999999999853  48999999988743                               


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                               +.++...|+++|+++++++++++.++...     |+||+|+||+++|++...
T Consensus       137 ---------~~~~~~~Y~~sKaal~~~~~~la~e~~~~-----i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        137 ---------VTRNAAAYVTSKHAVLGLTRSIAVDYAPT-----IRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             ---------CCCCCchhhhhHHHHHHHHHHHHHHhCCC-----CEEEEEecCCccchHHhh
Confidence                     34456899999999999999999999763     889999999999998643

>PRK06128 oxidoreductase; Provisional

Probab=99.97  E-value=9.2e-30  Score=215.83  Aligned_cols=173  Identities=24%  Similarity=0.282  Sum_probs=147.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc--hhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS--RGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~--~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++++.|+++| ..|+++.++.+  ..+...+.+.         .+|++++++++++++++.+.++++|+|
T Consensus        60 ITGas~gIG~~~a~~l~~~G-~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l  138 (300)
T PRK06128         60 ITGADSGIGRATAIAFAREG-ADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDIL  138 (300)
T ss_pred             EecCCCcHHHHHHHHHHHcC-CEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999995 56666665433  3333333332         289999999999999999999999999


Q ss_pred             EEccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          70 VNNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        70 v~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||||... ..++.+.+.+.|++++++|+.|+++++++++|.|+++++||++||..++.                     
T Consensus       139 V~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~---------------------  197 (300)
T PRK06128        139 VNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ---------------------  197 (300)
T ss_pred             EECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC---------------------
Confidence            99999853 35577788999999999999999999999999998889999999988843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|++||+++++|+++++.++...    ||+||+|.||+++|++..
T Consensus       198 -------------------~~~~~~~Y~asK~a~~~~~~~la~el~~~----gI~v~~v~PG~i~t~~~~  244 (300)
T PRK06128        198 -------------------PSPTLLDYASTKAAIVAFTKALAKQVAEK----GIRVNAVAPGPVWTPLQP  244 (300)
T ss_pred             -------------------CCCCchhHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEECcCcCCCcc
Confidence                               33455789999999999999999999887    788999999999999864

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.97  E-value=2.3e-30  Score=221.46  Aligned_cols=184  Identities=22%  Similarity=0.263  Sum_probs=144.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcC--CCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHG--GVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~--~id   67 (230)
                      ||||++|||+++|++|+++ +.+|++++|+++++++..+++..           +|+++  ++.+.++++.+.++  ++|
T Consensus        58 ITGAs~GIG~alA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~did  134 (320)
T PLN02780         58 VTGPTDGIGKGFAFQLARK-GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLDVG  134 (320)
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCCcc
Confidence            7999999999999999999 55788999999988877665531           68885  22333333434334  467


Q ss_pred             EEEEccCCccc--cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          68 VLVNNAAIAFK--VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        68 ~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ++|||||...+  ..+.+.+.+++++++++|+.|++.++++++|.|++  .|+||++||.++...+              
T Consensus       135 ilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--------------  200 (320)
T PLN02780        135 VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP--------------  200 (320)
T ss_pred             EEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--------------
Confidence            99999998643  35677888999999999999999999999999853  4899999998874310              


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC---
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK---  220 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~---  220 (230)
                                              +.+....|++||+++++|+++|+.|+.+.    ||+|++|+||+++|+|....   
T Consensus       201 ------------------------~~p~~~~Y~aSKaal~~~~~~L~~El~~~----gI~V~~v~PG~v~T~~~~~~~~~  252 (320)
T PLN02780        201 ------------------------SDPLYAVYAATKAYIDQFSRCLYVEYKKS----GIDVQCQVPLYVATKMASIRRSS  252 (320)
T ss_pred             ------------------------CCccchHHHHHHHHHHHHHHHHHHHHhcc----CeEEEEEeeCceecCcccccCCC
Confidence                                    12345899999999999999999999887    78899999999999997621   


Q ss_pred             -CCCCccccC
Q psy7994         221 -GPLTIDQDN  229 (230)
Q Consensus       221 -~~~~~~~~a  229 (230)
                       ...+||++|
T Consensus       253 ~~~~~p~~~A  262 (320)
T PLN02780        253 FLVPSSDGYA  262 (320)
T ss_pred             CCCCCHHHHH
Confidence             124566554

>PRK07985 oxidoreductase; Provisional

Probab=99.97  E-value=8.8e-30  Score=215.48  Aligned_cols=172  Identities=22%  Similarity=0.216  Sum_probs=146.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc--chhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA--SRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~--~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++++.|+++| ..|++.+|+.  +..+...+.+         ..+|++|++++.++++++.+.++++|++
T Consensus        54 ITGas~gIG~aia~~L~~~G-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l  132 (294)
T PRK07985         54 VTGGDSGIGRAAAIAYAREG-ADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIM  132 (294)
T ss_pred             EECCCCcHHHHHHHHHHHCC-CEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999994 5677776543  3333333222         2389999999999999999999999999


Q ss_pred             EEccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          70 VNNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        70 v~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||||... ..++.+.+.++|++++++|+.|+++++++++|.|++.++||++||..++.                     
T Consensus       133 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~---------------------  191 (294)
T PRK07985        133 ALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ---------------------  191 (294)
T ss_pred             EECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc---------------------
Confidence            99999753 34577788999999999999999999999999998889999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                         +.++...|+++|+++++++++++.++..+    ||+||+|.||+++|++.
T Consensus       192 -------------------~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrvn~i~PG~v~t~~~  237 (294)
T PRK07985        192 -------------------PSPHLLDYAATKAAILNYSRGLAKQVAEK----GIRVNIVAPGPIWTALQ  237 (294)
T ss_pred             -------------------CCCCcchhHHHHHHHHHHHHHHHHHHhHh----CcEEEEEECCcCccccc
Confidence                               33445899999999999999999999987    78899999999999985

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=5e-30  Score=212.26  Aligned_cols=174  Identities=29%  Similarity=0.381  Sum_probs=145.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||+++++.|+++|+ .|++..+. ++..+....   .+..+|++|+++++++++++.+.++++|+||||+|..
T Consensus        12 ItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~   90 (255)
T PRK06463         12 ITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIM   90 (255)
T ss_pred             EeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            799999999999999999955 55555544 333333221   1223899999999999999999999999999999987


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      ...++.+.+.+.|++++++|+.+++++++.++|.|+  +.++||++||..+...                          
T Consensus        91 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~--------------------------  144 (255)
T PRK06463         91 YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT--------------------------  144 (255)
T ss_pred             CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC--------------------------
Confidence            666777788999999999999999999999999986  3489999999877421                          


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                   +.++...|++||+|+++++++++.++.+.    ||+||+|+||+++|++..
T Consensus       145 -------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----~i~v~~i~Pg~v~t~~~~  191 (255)
T PRK06463        145 -------------AAEGTTFYAITKAGIIILTRRLAFELGKY----GIRVNAVAPGWVETDMTL  191 (255)
T ss_pred             -------------CCCCccHhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCCCCCchhh
Confidence                         12344789999999999999999999987    799999999999999864

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-30  Score=219.02  Aligned_cols=187  Identities=24%  Similarity=0.335  Sum_probs=150.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++.           .+|++|.++++++++++.+.+++||+|
T Consensus        19 ITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~l   97 (313)
T PRK05854         19 VTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLL   97 (313)
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEE
Confidence            7999999999999999999 5688889999887776655442           289999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||||.... +..+.+.+.|+.+|++|+.|++.+++.++|.|++. ++||++||.++.......+.              
T Consensus        98 i~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~--------------  162 (313)
T PRK05854         98 INNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDD--------------  162 (313)
T ss_pred             EECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccc--------------
Confidence            999998643 33456778999999999999999999999999654 89999999987543221100              


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                    -+...+..+...|+.||+|+.+|++.|+.++....  .||+||+|+||+++|++...
T Consensus       163 --------------~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~--~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        163 --------------LNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAG--WGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             --------------ccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCC--CCeEEEEEecceeccCcccc
Confidence                          00112234558999999999999999998764321  26999999999999998743

>PLN00015 protochlorophyllide reductase

Probab=99.97  E-value=8.6e-30  Score=216.83  Aligned_cols=207  Identities=19%  Similarity=0.227  Sum_probs=151.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++|...|++++|+.++++...+++.         .+|++|.++++++++++.+.+++||+|||
T Consensus         2 ITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lIn   81 (308)
T PLN00015          2 ITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVC   81 (308)
T ss_pred             EeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEE
Confidence            799999999999999999953688889998887776655542         38999999999999999988899999999


Q ss_pred             ccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          72 NAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        72 ~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||+..+ .+..+.+.+.|+++|++|+.|++.++++++|.|++    .++||++||..+........      ..+....
T Consensus        82 nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~------~~~~~~~  155 (308)
T PLN00015         82 NAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGN------VPPKANL  155 (308)
T ss_pred             CCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccccccccccc------CCCccch
Confidence            9998543 34566788999999999999999999999999853    37999999988743210000      0000000


Q ss_pred             HHHHHHHHHHH----HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc-ccCCCCC
Q psy7994         147 EELSALMNEFV----ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV-NTDMSSG  219 (230)
Q Consensus       147 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v-~t~~~~~  219 (230)
                      ..+..+.....    ..-.+   .....+...|+.||+|+..+++.+++++...   .||+|++|+||+| .|+|.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~---~gi~v~~v~PG~v~~t~~~~~  227 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMID---GGEFDGAKAYKDSKVCNMLTMQEFHRRYHEE---TGITFASLYPGCIATTGLFRE  227 (308)
T ss_pred             hhhhhhhcccCCccchhhcc---ccCCcHHHHHhHhHHHHHHHHHHHHHhhccc---CCeEEEEecCCcccCcccccc
Confidence            00000000000    00000   0112345789999999988999999998642   2799999999999 7998654

>KOG1611|consensus

Probab=99.97  E-value=4.4e-30  Score=202.36  Aligned_cols=188  Identities=31%  Similarity=0.462  Sum_probs=154.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhh--cCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAE--HGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~--~~~id~   68 (230)
                      ||||++|||..++++|.+.-+- .++.++|++++.....+..         .+.|++..+++..+++++.+-  ...+|+
T Consensus         8 ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~Glnl   87 (249)
T KOG1611|consen    8 ITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNL   87 (249)
T ss_pred             EeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceE
Confidence            7999999999999999997444 4555677788753333332         128999999999999999988  448999


Q ss_pred             EEEccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-------------ceEEEecCCCccccccchHH
Q psy7994          69 LVNNAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-------------GRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        69 lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-------------g~ii~~sS~~~~~~~~~~~~  134 (230)
                      +|||||+... ......+.+.|.+.+++|..|++.++|+|+|++++.             +.|||+||.++....     
T Consensus        88 LinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~-----  162 (249)
T KOG1611|consen   88 LINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG-----  162 (249)
T ss_pred             EEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC-----
Confidence            9999999754 334445668899999999999999999999999643             279999998884311     


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                                      ....+..+|++||+|+++|+|+++.+|.++    +|.|.++|||||+|
T Consensus       163 --------------------------------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~----~ilv~sihPGwV~T  206 (249)
T KOG1611|consen  163 --------------------------------FRPGGLSAYRMSKAALNMFAKSLSVDLKDD----HILVVSIHPGWVQT  206 (249)
T ss_pred             --------------------------------CCCcchhhhHhhHHHHHHHHHHhhhhhcCC----cEEEEEecCCeEEc
Confidence                                            112345999999999999999999999987    78899999999999


Q ss_pred             CCCCCCCCCCccccC
Q psy7994         215 DMSSGKGPLTIDQDN  229 (230)
Q Consensus       215 ~~~~~~~~~~~~~~a  229 (230)
                      +|.+.-..+++|+.+
T Consensus       207 DMgg~~a~ltveeSt  221 (249)
T KOG1611|consen  207 DMGGKKAALTVEEST  221 (249)
T ss_pred             CCCCCCcccchhhhH
Confidence            999999999999864

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.97  E-value=8.7e-30  Score=210.79  Aligned_cols=174  Identities=25%  Similarity=0.327  Sum_probs=145.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||++|||++++++|+++| ..|++.++... .........      ..+|++|+++++++++++.+.++++|++||||
T Consensus        15 ItG~~~gIG~a~a~~l~~~G-~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~A   93 (253)
T PRK08993         15 VTGCDTGLGQGMALGLAEAG-CDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNA   93 (253)
T ss_pred             EECCCchHHHHHHHHHHHCC-CEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            79999999999999999995 56666665432 111111111      13899999999999999999999999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |...+.++.+.+.++|++++++|+.+++.++++++|.|++   .|+||++||..+..                       
T Consensus        94 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------------------  150 (253)
T PRK08993         94 GLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ-----------------------  150 (253)
T ss_pred             CCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc-----------------------
Confidence            9876677788889999999999999999999999998853   37999999987743                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       +.+....|+.+|+|+++++++++.++.+.    ||+||+|+||+++|++...
T Consensus       151 -----------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~pG~v~T~~~~~  198 (253)
T PRK08993        151 -----------------GGIRVPSYTASKSGVMGVTRLMANEWAKH----NINVNAIAPGYMATNNTQQ  198 (253)
T ss_pred             -----------------CCCCCcchHHHHHHHHHHHHHHHHHhhhh----CeEEEEEeeCcccCcchhh
Confidence                             33345799999999999999999999987    7999999999999998653

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8e-30  Score=213.81  Aligned_cols=173  Identities=24%  Similarity=0.324  Sum_probs=151.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh---hhcccCCCHHHHHHHHHHHHhhc-CCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK---LQKLDILDKNSIKALHDHLEAEH-GGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~---~~~~D~s~~~~v~~~~~~~~~~~-~~id~lv~~ag~~   76 (230)
                      ||||++|||+++++.|+++ +..|++++|+++.++...+.   +..+|++|+++++.+++++.+.+ +++|+||||||..
T Consensus         9 ItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~   87 (277)
T PRK05993          9 ITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYG   87 (277)
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcC
Confidence            7999999999999999999 56888899998777655432   22389999999999999997766 6899999999998


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      ....+.+.+.+.+++++++|+.|++.+++.++|.|++.  ++||++||..+..                           
T Consensus        88 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~---------------------------  140 (277)
T PRK05993         88 QPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV---------------------------  140 (277)
T ss_pred             CCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC---------------------------
Confidence            77778888999999999999999999999999999653  7999999988743                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                   +.++...|++||+++++++++++.|+...    ||+|++|+||+++|++..
T Consensus       141 -------------~~~~~~~Y~asK~a~~~~~~~l~~el~~~----gi~v~~v~Pg~v~T~~~~  187 (277)
T PRK05993        141 -------------PMKYRGAYNASKFAIEGLSLTLRMELQGS----GIHVSLIEPGPIETRFRA  187 (277)
T ss_pred             -------------CCCccchHHHHHHHHHHHHHHHHHHhhhh----CCEEEEEecCCccCchhh
Confidence                         34456899999999999999999999987    788999999999999865

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=6.7e-30  Score=216.23  Aligned_cols=174  Identities=14%  Similarity=0.200  Sum_probs=137.0

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCc-----------chhHHH----------HHhh--hcccCCCH------
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDA-----------SRGQEA----------LEKL--QKLDILDK------   49 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~-----------~~~~~~----------~~~~--~~~D~s~~------   49 (230)
                      |||++  +|||+++|+.|+++| ..|++.++.+           .+....          ..++  ...|+++.      
T Consensus        13 ITGa~~~~GIG~a~A~~la~~G-a~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~~~   91 (299)
T PRK06300         13 IAGIGDDQGYGWGIAKALAEAG-ATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVPEE   91 (299)
T ss_pred             EeCCCCCCCHHHHHHHHHHHCC-CEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEeecc
Confidence            79996  999999999999995 5555554321           000000          0000  01344333      


Q ss_pred             ------------HHHHHHHHHHHhhcCCCcEEEEccCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCc
Q psy7994          50 ------------NSIKALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHG  115 (230)
Q Consensus        50 ------------~~v~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g  115 (230)
                                  ++++++++++.+.+|+||+||||||...  ..++.+.+.++|+++|++|+.|+++++++++|+|+++|
T Consensus        92 i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G  171 (299)
T PRK06300         92 IRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGG  171 (299)
T ss_pred             cCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCC
Confidence                        3689999999999999999999999753  46778889999999999999999999999999999889


Q ss_pred             eEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCc-hhhHHHHHHHHHHHHHHHhhh
Q psy7994         116 RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS-AYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       116 ~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~~~~  194 (230)
                      +||+++|..+..                                        +.+++. .|++||+|+.+|+++++.|+.
T Consensus       172 ~ii~iss~~~~~----------------------------------------~~p~~~~~Y~asKaAl~~lt~~la~el~  211 (299)
T PRK06300        172 STISLTYLASMR----------------------------------------AVPGYGGGMSSAKAALESDTKVLAWEAG  211 (299)
T ss_pred             eEEEEeehhhcC----------------------------------------cCCCccHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999988743                                        233333 799999999999999999997


Q ss_pred             hhhccCCeEEEEecCCccccCCCC
Q psy7994         195 QDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       195 ~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                      +.   .|||||+|+||+++|++..
T Consensus       212 ~~---~gIrVn~V~PG~v~T~~~~  232 (299)
T PRK06300        212 RR---WGIRVNTISAGPLASRAGK  232 (299)
T ss_pred             CC---CCeEEEEEEeCCccChhhh
Confidence            62   2799999999999999864

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.97  E-value=1e-29  Score=211.26  Aligned_cols=172  Identities=21%  Similarity=0.231  Sum_probs=146.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+.+.      .+|++++++++.+++++.+.++++|+||||+|
T Consensus        11 VtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag   89 (263)
T PRK06200         11 ITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAG   89 (263)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            7999999999999999999 5578889999887776655432      38999999999999999999999999999999


Q ss_pred             Ccc-ccCCCCCChhH----HHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          75 IAF-KVNSSEPFGSQ----ALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        75 ~~~-~~~~~~~~~~~----~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ... ..++.+.+.+.    |++++++|+.+++.++++++|.|+ ++++||+++|..++.                     
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------------------  148 (263)
T PRK06200         90 IWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFY---------------------  148 (263)
T ss_pred             CcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcC---------------------
Confidence            854 23444555554    899999999999999999999986 458999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +..+...|++||++++.|+++++.++.+.     |+||+|+||+++|+|..
T Consensus       149 -------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~-----Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        149 -------------------PGGGGPLYTASKHAVVGLVRQLAYELAPK-----IRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHHhcC-----cEEEEEeCCccccCCcC
Confidence                               33455789999999999999999999864     88999999999999864

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=209.72  Aligned_cols=172  Identities=25%  Similarity=0.350  Sum_probs=148.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++.+|+ ++.+...+.+         ..+|++++++++.+++++.+.++++|++||
T Consensus        20 ItGas~gIG~~ia~~l~~~-G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   97 (258)
T PRK06935         20 VTGGNTGLGQGYAVALAKA-GADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVN   97 (258)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5577777776 4444433322         238999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|...+.++.+.+.+.|++++++|+.+++.++++++|.|++  .++||++||..+..                      
T Consensus        98 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  155 (258)
T PRK06935         98 NAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ----------------------  155 (258)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc----------------------
Confidence            999877677778888999999999999999999999999864  47999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.+....|+++|+++++++++++.++.+.    ||+||+|+||+++|++.+
T Consensus       156 ------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~i~PG~v~t~~~~  202 (258)
T PRK06935        156 ------------------GGKFVPAYTASKHGVAGLTKAFANELAAY----NIQVNAIAPGYIKTANTA  202 (258)
T ss_pred             ------------------CCCCchhhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEeccccccchh
Confidence                              33445799999999999999999999987    789999999999999864

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=210.21  Aligned_cols=174  Identities=26%  Similarity=0.387  Sum_probs=153.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++| ..|++.+|+.+++++..+.+.         .+|++++++++.+++++.+.++++|+|||
T Consensus        15 ItGa~~~iG~~ia~~l~~~G-~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   93 (265)
T PRK07097         15 ITGASYGIGFAIAKAYAKAG-ATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVN   93 (265)
T ss_pred             EeCCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            79999999999999999994 567778888877766554442         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|...+.++.+.+.+.|++++++|+.|++.+++.++|.|++  .++||++||..+..                      
T Consensus        94 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  151 (265)
T PRK07097         94 NAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL----------------------  151 (265)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC----------------------
Confidence            999987777888899999999999999999999999999864  48999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +..+...|+++|+++++++++++.++.+.    ||+||+|.||+++|++...
T Consensus       152 ------------------~~~~~~~Y~~sKaal~~l~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  199 (265)
T PRK07097        152 ------------------GRETVSAYAAAKGGLKMLTKNIASEYGEA----NIQCNGIGPGYIATPQTAP  199 (265)
T ss_pred             ------------------CCCCCccHHHHHHHHHHHHHHHHHHhhhc----CceEEEEEeccccccchhh
Confidence                              34456899999999999999999999987    7889999999999997643

>PRK08643 acetoin reductase; Validated

Probab=99.97  E-value=2.1e-29  Score=208.47  Aligned_cols=173  Identities=27%  Similarity=0.345  Sum_probs=151.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++ +..|++++|+.+.++....++.         .+|++++++++++++++.+.++++|+|||
T Consensus         7 ItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   85 (256)
T PRK08643          7 VTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVN   85 (256)
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5588889998877766655443         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |+|.....++.+.+.+.|++++++|+.+++.+++.+++.|++   .++||++||..+..                     
T Consensus        86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~---------------------  144 (256)
T PRK08643         86 NAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV---------------------  144 (256)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc---------------------
Confidence            999876677778889999999999999999999999998854   37999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|+++|++++.+++.++.++.+.    ||+||+|+||+++|++..
T Consensus       145 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~Pg~v~t~~~~  191 (256)
T PRK08643        145 -------------------GNPELAVYSSTKFAVRGLTQTAARDLASE----GITVNAYAPGIVKTPMMF  191 (256)
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHhccc----CcEEEEEeeCCCcChhhh
Confidence                               33455889999999999999999999876    799999999999999864

>PRK12743 oxidoreductase; Provisional

Probab=99.97  E-value=2.5e-29  Score=208.34  Aligned_cols=173  Identities=27%  Similarity=0.242  Sum_probs=148.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|. .|+++ .++.+.++...+++.         .+|++++++++.+++++.+.++++|+||
T Consensus         7 ItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   85 (256)
T PRK12743          7 VTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLV   85 (256)
T ss_pred             EECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799999999999999999955 55555 556665555544432         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||+|......+.+.+.+.|++++++|+.+++.+++++++.|.+   .++||++||..+.                     
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~---------------------  144 (256)
T PRK12743         86 NNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH---------------------  144 (256)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc---------------------
Confidence            9999876666777888999999999999999999999998853   3799999998773                     


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         .+.++...|+++|+++.+++++++.++..+    ||++|+|+||+++|++.+
T Consensus       145 -------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~----~i~v~~v~Pg~~~t~~~~  192 (256)
T PRK12743        145 -------------------TPLPGASAYTAAKHALGGLTKAMALELVEH----GILVNAVAPGAIATPMNG  192 (256)
T ss_pred             -------------------CCCCCcchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEeCCccCcccc
Confidence                               245566899999999999999999999987    789999999999999865

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=209.57  Aligned_cols=184  Identities=23%  Similarity=0.263  Sum_probs=148.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-hHHHHHhh----------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-GQEALEKL----------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-~~~~~~~~----------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++|+.+|++++|+.++ +++..+++          ..+|++|+++++++++++.+ ++++|++
T Consensus        13 ItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~l   91 (253)
T PRK07904         13 LLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-GGDVDVA   91 (253)
T ss_pred             EEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-cCCCCEE
Confidence            799999999999999999976899999998875 65554433          23899999999999999886 5899999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||+|...+......+.+...+++++|+.+++.+++.++|.|++  .++||++||..+..                    
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~--------------------  151 (253)
T PRK07904         92 IVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER--------------------  151 (253)
T ss_pred             EEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC--------------------
Confidence            99999853321111234455678999999999999999999964  38999999987733                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC----CC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG----PL  223 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~----~~  223 (230)
                                          +.++...|++||+++.+|+++++.++...    |++|++|+||+++|++.....    ..
T Consensus       152 --------------------~~~~~~~Y~~sKaa~~~~~~~l~~el~~~----~i~v~~v~Pg~v~t~~~~~~~~~~~~~  207 (253)
T PRK07904        152 --------------------VRRSNFVYGSTKAGLDGFYLGLGEALREY----GVRVLVVRPGQVRTRMSAHAKEAPLTV  207 (253)
T ss_pred             --------------------CCCCCcchHHHHHHHHHHHHHHHHHHhhc----CCEEEEEeeCceecchhccCCCCCCCC
Confidence                                22345789999999999999999999887    788999999999999876543    23


Q ss_pred             CccccC
Q psy7994         224 TIDQDN  229 (230)
Q Consensus       224 ~~~~~a  229 (230)
                      +++++|
T Consensus       208 ~~~~~A  213 (253)
T PRK07904        208 DKEDVA  213 (253)
T ss_pred             CHHHHH
Confidence            555544

>PRK05855 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.6e-29  Score=231.08  Aligned_cols=174  Identities=25%  Similarity=0.383  Sum_probs=155.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+.+.         .+|++|+++++++++++.+.++++|+|||
T Consensus       320 v~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~  398 (582)
T PRK05855        320 VTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVN  398 (582)
T ss_pred             EECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence            7999999999999999999 5568889999888777665543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.....++.+.+.+++++++++|+.|++.++++++|.|++   +|+||++||.+++.                     
T Consensus       399 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------------------  457 (582)
T PRK05855        399 NAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA---------------------  457 (582)
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc---------------------
Confidence            999987777888899999999999999999999999999864   37999999998854                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||+++++++++++.++...    ||+|++|+||+++|+|.+.
T Consensus       458 -------------------~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~  505 (582)
T PRK05855        458 -------------------PSRSLPAYATSKAAVLMLSECLRAELAAA----GIGVTAICPGFVDTNIVAT  505 (582)
T ss_pred             -------------------CCCCCcHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEEeCCCcccchhc
Confidence                               34456899999999999999999999987    7889999999999998664

>PLN02253 xanthoxin dehydrogenase

Probab=99.97  E-value=3.4e-29  Score=209.98  Aligned_cols=173  Identities=23%  Similarity=0.291  Sum_probs=148.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||++++++|+++ +..|++.+|+.+..+...+.+.        .+|++|+++++++++++.+.++++|+||||
T Consensus        23 ItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~  101 (280)
T PLN02253         23 VTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNN  101 (280)
T ss_pred             EECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999999 5678888887766655554432        389999999999999999999999999999


Q ss_pred             cCCccc--cCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          73 AAIAFK--VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        73 ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||....  ..+.+.+.++|++++++|+.|++++++++++.|.  +.|+||+++|..+..                     
T Consensus       102 Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~---------------------  160 (280)
T PLN02253        102 AGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI---------------------  160 (280)
T ss_pred             CCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc---------------------
Confidence            998532  3466788899999999999999999999999885  348999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|+++|+++++++++++.++...    ||+||+|+||+++|++..
T Consensus       161 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~pg~v~t~~~~  207 (280)
T PLN02253        161 -------------------GGLGPHAYTGSKHAVLGLTRSVAAELGKH----GIRVNCVSPYAVPTALAL  207 (280)
T ss_pred             -------------------cCCCCcccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcccccccc
Confidence                               33344789999999999999999999987    799999999999998753

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-29  Score=213.27  Aligned_cols=185  Identities=23%  Similarity=0.274  Sum_probs=153.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++ +..|++++|+.+.+++..+++.         .+|++|++++.++++++.+.++++|++||
T Consensus        45 ItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~  123 (293)
T PRK05866         45 LTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILIN  123 (293)
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5688999999888777655542         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCC--ChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          72 NAAIAFKVNSSEP--FGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        72 ~ag~~~~~~~~~~--~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||.....++.+.  +.+.+++++++|+.|++.++++++|.|++  .++||++||.++...                   
T Consensus       124 ~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------------  184 (293)
T PRK05866        124 NAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE-------------------  184 (293)
T ss_pred             CCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-------------------
Confidence            9998765554442  35778999999999999999999999864  379999999755320                   


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC------C
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK------G  221 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~------~  221 (230)
                                          +.++...|+++|+++++|+++++.++...    ||+|++|+||+++|++....      .
T Consensus       185 --------------------~~p~~~~Y~asKaal~~l~~~la~e~~~~----gI~v~~v~pg~v~T~~~~~~~~~~~~~  240 (293)
T PRK05866        185 --------------------ASPLFSVYNASKAALSAVSRVIETEWGDR----GVHSTTLYYPLVATPMIAPTKAYDGLP  240 (293)
T ss_pred             --------------------CCCCcchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEEcCcccCccccccccccCCC
Confidence                                12334789999999999999999999887    78899999999999997532      2


Q ss_pred             CCCccccC
Q psy7994         222 PLTIDQDN  229 (230)
Q Consensus       222 ~~~~~~~a  229 (230)
                      ..+||++|
T Consensus       241 ~~~pe~vA  248 (293)
T PRK05866        241 ALTADEAA  248 (293)
T ss_pred             CCCHHHHH
Confidence            24666554

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-29  Score=206.87  Aligned_cols=171  Identities=18%  Similarity=0.255  Sum_probs=147.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++| ..|++++|+.+.++...+.+.         .+|++|+++++++++++.+.++++|+|||
T Consensus         6 ItG~s~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~   84 (252)
T PRK07677          6 ITGGSSGMGKAMAKRFAEEG-ANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALIN   84 (252)
T ss_pred             EeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEE
Confidence            79999999999999999994 588889998877766554432         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |+|.....++.+.+.+.|++++++|+.|++++++++++.|.+   .++||++||..+..                     
T Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~---------------------  143 (252)
T PRK07677         85 NAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD---------------------  143 (252)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc---------------------
Confidence            999765566778889999999999999999999999998743   48999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                         +.++...|+++|+++++|+++++.++.+.   .|++||+|+||+++|.
T Consensus       144 -------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~---~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        144 -------------------AGPGVIHSAAAKAGVLAMTRTLAVEWGRK---YGIRVNAIAPGPIERT  188 (252)
T ss_pred             -------------------CCCCCcchHHHHHHHHHHHHHHHHHhCcc---cCeEEEEEeecccccc
Confidence                               23345789999999999999999998752   2799999999999954

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.9e-29  Score=207.74  Aligned_cols=174  Identities=21%  Similarity=0.247  Sum_probs=151.0

Q ss_pred             CCCCCC-cHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANK-GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~-giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+| |||+++++.|+++| ..|++++|+.++++...+++.           .+|++++++++++++++.+.++++|+
T Consensus        22 ItG~sg~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  100 (262)
T PRK07831         22 VTAAAGTGIGSATARRALEEG-ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDV  100 (262)
T ss_pred             EECCCcccHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799985 99999999999995 568888888877766554331           27999999999999999999999999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||+|...+..+.+.+.+.|++++++|+.+++.++++++|.|++   .++||+++|..+..                  
T Consensus       101 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------------  162 (262)
T PRK07831        101 LVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------------  162 (262)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------------
Confidence            999999876677888889999999999999999999999998853   47999999987743                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                            +..+...|+++|+++++++++++.++.++    ||+||+|+||+++|++...
T Consensus       163 ----------------------~~~~~~~Y~~sKaal~~~~~~la~e~~~~----gI~v~~i~Pg~~~t~~~~~  210 (262)
T PRK07831        163 ----------------------AQHGQAHYAAAKAGVMALTRCSALEAAEY----GVRINAVAPSIAMHPFLAK  210 (262)
T ss_pred             ----------------------CCCCCcchHHHHHHHHHHHHHHHHHhCcc----CeEEEEEeeCCccCccccc
Confidence                                  33455899999999999999999999987    7899999999999998653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.97  E-value=2.3e-29  Score=209.23  Aligned_cols=172  Identities=23%  Similarity=0.210  Sum_probs=144.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.+++..+..      ..+|+++.+++.++++++.+.++++|+||||||
T Consensus        10 ItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag   88 (262)
T TIGR03325        10 VTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAG   88 (262)
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            7999999999999999999 567888899887776654432      238999999999999999999999999999999


Q ss_pred             Cccc-cCCCCCCh----hHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          75 IAFK-VNSSEPFG----SQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        75 ~~~~-~~~~~~~~----~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      .... .++.+.+.    +.|++++++|+.+++.++++++|.|+ ++++||+++|..+..                     
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~---------------------  147 (262)
T TIGR03325        89 IWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY---------------------  147 (262)
T ss_pred             CCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec---------------------
Confidence            7532 33333333    47999999999999999999999885 458999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +..+...|+++|+|+++|+++++.++++.     |+||+|+||+++|+|..
T Consensus       148 -------------------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-----irvn~i~PG~i~t~~~~  193 (262)
T TIGR03325       148 -------------------PNGGGPLYTAAKHAVVGLVKELAFELAPY-----VRVNGVAPGGMSSDLRG  193 (262)
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHhhccC-----eEEEEEecCCCcCCCcc
Confidence                               33345789999999999999999999874     88999999999999864

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.97  E-value=4.2e-29  Score=207.42  Aligned_cols=173  Identities=22%  Similarity=0.254  Sum_probs=148.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++++.|+++| ..|+++.|+ .+..+...+.+.         .+|++|++++.++++++.+.++++|++|
T Consensus        12 ItGa~~gIG~~ia~~l~~~G-~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv   90 (261)
T PRK08936         12 ITGGSTGLGRAMAVRFGKEK-AKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMI   90 (261)
T ss_pred             EeCCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999999999999999995 466666664 344444444332         3899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||+|...+.++.+.+.+.|++++++|+.+++.+++.+++.|++   .++||++||..+..                    
T Consensus        91 ~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~--------------------  150 (261)
T PRK08936         91 NNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI--------------------  150 (261)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC--------------------
Confidence            9999877777778889999999999999999999999998854   47999999987632                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|+++|+++.+++++++.++.+.    ||+||+|+||+++|++..
T Consensus       151 --------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~pg~v~t~~~~  197 (261)
T PRK08936        151 --------------------PWPLFVHYAASKGGVKLMTETLAMEYAPK----GIRVNNIGPGAINTPINA  197 (261)
T ss_pred             --------------------CCCCCcccHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEECcCCCCccc
Confidence                                44456899999999999999999999886    799999999999999865

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=5.6e-29  Score=206.33  Aligned_cols=172  Identities=26%  Similarity=0.245  Sum_probs=145.0

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecC-----------cchhHHHHHhhh---------cccCCCHHHHHHHHHH
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARD-----------ASRGQEALEKLQ---------KLDILDKNSIKALHDH   58 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~-----------~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~   58 (230)
                      ||||+  +|||+++|++|+++|. .|++.++.           .+......+++.         .+|++++++++.++++
T Consensus        11 VtGas~~~giG~~~a~~l~~~G~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~   89 (256)
T PRK12859         11 VTGVSRLDGIGAAICKELAEAGA-DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNK   89 (256)
T ss_pred             EECCCCCCChHHHHHHHHHHCCC-eEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            79999  4999999999999955 56665432           122223333332         3899999999999999


Q ss_pred             HHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHH
Q psy7994          59 LEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALK  136 (230)
Q Consensus        59 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~  136 (230)
                      +.+.++++|++|||+|.....++.+.+.+.|++++++|+.+++.++++++|.|++  .++||++||..+..         
T Consensus        90 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------  160 (256)
T PRK12859         90 VTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG---------  160 (256)
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC---------
Confidence            9999999999999999877777888999999999999999999999999999864  47999999988743         


Q ss_pred             HHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         137 KKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                                     +.++...|+++|+++.+|+++++.++.+.    ||+||+|+||+++|++
T Consensus       161 -------------------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~----~i~v~~v~PG~i~t~~  205 (256)
T PRK12859        161 -------------------------------PMVGELAYAATKGAIDALTSSLAAEVAHL----GITVNAINPGPTDTGW  205 (256)
T ss_pred             -------------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEEccccCCC
Confidence                                           34456899999999999999999999987    7899999999999986


Q ss_pred             C
Q psy7994         217 S  217 (230)
Q Consensus       217 ~  217 (230)
                      .
T Consensus       206 ~  206 (256)
T PRK12859        206 M  206 (256)
T ss_pred             C
Confidence            4

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.3e-29  Score=215.55  Aligned_cols=175  Identities=22%  Similarity=0.267  Sum_probs=154.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++ +..|++++|+++++++..+++.         .+|++|+++++++++++.+.++++|++||
T Consensus        13 ITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lIn   91 (334)
T PRK07109         13 ITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVN   91 (334)
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            7999999999999999999 4578889999888877666553         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|.....++.+.+.+.+++++++|+.|++.++++++|.|++  .++||++||..+..                      
T Consensus        92 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~----------------------  149 (334)
T PRK07109         92 NAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR----------------------  149 (334)
T ss_pred             CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc----------------------
Confidence            999877777888899999999999999999999999999965  48999999998843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.+....|+++|+++++|+++++.|+...+.  +|++++|+||+++|++..
T Consensus       150 ------------------~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~--~I~v~~v~Pg~v~T~~~~  198 (334)
T PRK07109        150 ------------------SIPLQSAYCAAKHAIRGFTDSLRCELLHDGS--PVSVTMVQPPAVNTPQFD  198 (334)
T ss_pred             ------------------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCC--CeEEEEEeCCCccCchhh
Confidence                              3344589999999999999999999986432  599999999999999754

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5e-29  Score=205.72  Aligned_cols=174  Identities=28%  Similarity=0.279  Sum_probs=151.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.+++++|+++| ..|++++|+.+.++...+++.         .+|+++.++++.+++++.+.++++|++||
T Consensus        13 ItGas~gIG~~l~~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   91 (252)
T PRK07035         13 VTGASRGIGEAIAKLLAQQG-AHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVN   91 (252)
T ss_pred             EECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79999999999999999995 588888998877766655442         28999999999999999999999999999


Q ss_pred             ccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |+|... ..++.+.+.+.+++++++|+.+++.++++++|+|++  .++||++||..+..                     
T Consensus        92 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------------  150 (252)
T PRK07035         92 NAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS---------------------  150 (252)
T ss_pred             CCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC---------------------
Confidence            999743 355667888999999999999999999999999864  38999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||+++++++++++.++.+.    ||+|++|+||+++|++...
T Consensus       151 -------------------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~----gi~v~~i~PG~v~t~~~~~  198 (252)
T PRK07035        151 -------------------PGDFQGIYSITKAAVISMTKAFAKECAPF----GIRVNALLPGLTDTKFASA  198 (252)
T ss_pred             -------------------CCCCCcchHHHHHHHHHHHHHHHHHHhhc----CEEEEEEeeccccCccccc
Confidence                               34456899999999999999999999887    7999999999999998654

>PRK09242 tropinone reductase; Provisional

Probab=99.97  E-value=5.7e-29  Score=206.06  Aligned_cols=175  Identities=27%  Similarity=0.405  Sum_probs=153.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++++.|+++ +..|++++|+.+.++...+++.           .+|++++++++.+++++.+.++++|+|
T Consensus        14 ItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   92 (257)
T PRK09242         14 ITGASKGIGLAIAREFLGL-GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHIL   92 (257)
T ss_pred             EeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7999999999999999999 5578889998887776655442           289999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||+|.....+..+.+.++|++.+++|+.+++.++++++|+|++  .++||++||..+..                    
T Consensus        93 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~--------------------  152 (257)
T PRK09242         93 VNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT--------------------  152 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC--------------------
Confidence            99999866566777889999999999999999999999999864  48999999988743                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                          +..+...|+++|++++.++++++.++...    |+++|+|+||+++|++....
T Consensus       153 --------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~i~Pg~i~t~~~~~~  201 (257)
T PRK09242        153 --------------------HVRSGAPYGMTKAALLQMTRNLAVEWAED----GIRVNAVAPWYIRTPLTSGP  201 (257)
T ss_pred             --------------------CCCCCcchHHHHHHHHHHHHHHHHHHHHh----CeEEEEEEECCCCCcccccc
Confidence                                34455889999999999999999999886    78999999999999987643

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.7e-29  Score=206.64  Aligned_cols=175  Identities=26%  Similarity=0.302  Sum_probs=151.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.+++++|+++| ..|++++|+.++++...+.+.         .+|++++++++.+++++.+.++++|++||
T Consensus        12 ItGas~~iG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   90 (253)
T PRK06172         12 VTGGAAGIGRATALAFAREG-AKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFN   90 (253)
T ss_pred             EeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            79999999999999999994 578889998877766555443         28999999999999999999999999999


Q ss_pred             ccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |+|...+ .++.+.+.+.|++++++|+.+++.++++++|.|++  .++||++||..+..                     
T Consensus        91 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~---------------------  149 (253)
T PRK06172         91 NAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG---------------------  149 (253)
T ss_pred             CCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc---------------------
Confidence            9998643 34677888999999999999999999999998853  47999999988744                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.++...|+++|+++++++++++.++...    ||+|++|+||+++|++.+..
T Consensus       150 -------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~----~i~v~~i~PG~v~t~~~~~~  198 (253)
T PRK06172        150 -------------------AAPKMSIYAASKHAVIGLTKSAAIEYAKK----GIRVNAVCPAVIDTDMFRRA  198 (253)
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCCccChhhhhh
Confidence                               34456899999999999999999999876    79999999999999997654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.96  E-value=3.1e-29  Score=207.79  Aligned_cols=173  Identities=22%  Similarity=0.238  Sum_probs=145.1

Q ss_pred             CCCCCCcHHHHHHHHHHH----hcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQ----QFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~----~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||++++++|++    + +..|++++|+.+.++...+++.           .+|++++++++++++++.+.+++
T Consensus         5 ItGas~GIG~~~a~~la~~~~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   83 (256)
T TIGR01500         5 VTGASRGFGRTIAQELAKCLKSP-GSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRP   83 (256)
T ss_pred             EecCCCchHHHHHHHHHHhhccC-CcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcccc
Confidence            799999999999999997    5 6789999999888777655442           27999999999999999887765


Q ss_pred             C----cEEEEccCCcccc--CCCC-CChhHHHHHHHHhhhhHHHHHHHhcccccC----CceEEEecCCCccccccchHH
Q psy7994          66 V----DVLVNNAAIAFKV--NSSE-PFGSQALHTMRTNYFALIDVCDILFPLLRS----HGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        66 i----d~lv~~ag~~~~~--~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      +    |+||||||.....  ...+ .+.+.|+++|++|+.|++.+++.++|.|++    .++||++||..+..       
T Consensus        84 ~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~-------  156 (256)
T TIGR01500        84 KGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ-------  156 (256)
T ss_pred             CCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC-------
Confidence            3    6999999975321  1222 346889999999999999999999999864    36999999987743       


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                                       +.++...|++||+++++|+++++.++.+.    ||+||+|+||+++|
T Consensus       157 ---------------------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~----~i~v~~v~PG~v~T  199 (256)
T TIGR01500       157 ---------------------------------PFKGWALYCAGKAARDMLFQVLALEEKNP----NVRVLNYAPGVLDT  199 (256)
T ss_pred             ---------------------------------CCCCchHHHHHHHHHHHHHHHHHHHhcCC----CeEEEEecCCcccc
Confidence                                             34456899999999999999999999876    79999999999999


Q ss_pred             CCCC
Q psy7994         215 DMSS  218 (230)
Q Consensus       215 ~~~~  218 (230)
                      +|.+
T Consensus       200 ~~~~  203 (256)
T TIGR01500       200 DMQQ  203 (256)
T ss_pred             hHHH
Confidence            9864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.96  E-value=5.4e-29  Score=203.72  Aligned_cols=170  Identities=21%  Similarity=0.275  Sum_probs=143.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh----hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK----LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||++++++|+++ +.+|++++|+++........    +..+|++|+++++.+++++.+.++++|++|||+|..
T Consensus         7 ItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   85 (236)
T PRK06483          7 ITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDW   85 (236)
T ss_pred             EECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccc
Confidence            7999999999999999999 55788888877654333322    224899999999999999999999999999999986


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .+....+.+.++|++++++|+.+++.+++.++|.|++    .++||++||..+..                         
T Consensus        86 ~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~-------------------------  140 (236)
T PRK06483         86 LAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK-------------------------  140 (236)
T ss_pred             cCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-------------------------
Confidence            5555566778999999999999999999999999864    36999999987632                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                     +.++...|+++|+++++|+++++.++.+.     ||||+|+||++.|+.
T Consensus       141 ---------------~~~~~~~Y~asKaal~~l~~~~a~e~~~~-----irvn~v~Pg~~~~~~  184 (236)
T PRK06483        141 ---------------GSDKHIAYAASKAALDNMTLSFAAKLAPE-----VKVNSIAPALILFNE  184 (236)
T ss_pred             ---------------CCCCCccHHHHHHHHHHHHHHHHHHHCCC-----cEEEEEccCceecCC
Confidence                           34456899999999999999999999763     889999999998764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.96  E-value=5.5e-29  Score=208.51  Aligned_cols=174  Identities=18%  Similarity=0.263  Sum_probs=149.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++| ..|++++|+.+.++...+++.         .+|+++++++..+++++.+.++++|++||
T Consensus        15 VtGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~   93 (278)
T PRK08277         15 ITGGGGVLGGAMAKELARAG-AKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILIN   93 (278)
T ss_pred             EeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79999999999999999994 578888998877766555442         38999999999999999999999999999


Q ss_pred             ccCCccc---------------cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHH
Q psy7994          72 NAAIAFK---------------VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        72 ~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      |+|...+               .++.+.+.+.|++.+++|+.+++.++++++|.|++  .++||++||..++.       
T Consensus        94 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-------  166 (278)
T PRK08277         94 GAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT-------  166 (278)
T ss_pred             CCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC-------
Confidence            9996532               23556778999999999999999999999998853  48999999998843       


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                                       +.++...|+++|++++.++++++.++...    ||+||+|+||++.|
T Consensus       167 ---------------------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~----girvn~v~Pg~v~t  209 (278)
T PRK08277        167 ---------------------------------PLTKVPAYSAAKAAISNFTQWLAVHFAKV----GIRVNAIAPGFFLT  209 (278)
T ss_pred             ---------------------------------CCCCCchhHHHHHHHHHHHHHHHHHhCcc----CeEEEEEEeccCcC
Confidence                                             34456899999999999999999999986    79999999999999


Q ss_pred             CCCCC
Q psy7994         215 DMSSG  219 (230)
Q Consensus       215 ~~~~~  219 (230)
                      ++.+.
T Consensus       210 ~~~~~  214 (278)
T PRK08277        210 EQNRA  214 (278)
T ss_pred             cchhh
Confidence            97543

>KOG1209|consensus

Probab=99.96  E-value=7.1e-30  Score=199.36  Aligned_cols=175  Identities=25%  Similarity=0.337  Sum_probs=156.7

Q ss_pred             CCCCC-CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----cccCCCHHHHHHHHHHHHh-hcCCCcEEEEccC
Q psy7994           1 VTGAN-KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----KLDILDKNSIKALHDHLEA-EHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s-~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----~~D~s~~~~v~~~~~~~~~-~~~~id~lv~~ag   74 (230)
                      |||+| ||||.+++++|++. ++.|+.+.|.-+...+...+..    ++|+++++++.++..+++. .+|++|+|+||||
T Consensus        12 Itgcs~GGIG~ala~ef~~~-G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG   90 (289)
T KOG1209|consen   12 ITGCSSGGIGYALAKEFARN-GYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAG   90 (289)
T ss_pred             EeecCCcchhHHHHHHHHhC-CeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCC
Confidence            57777 99999999999999 7799999999888877654332    3899999999999999998 6889999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc-cCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL-RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l-~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      ...-.+..+.+.+..+++|++|++|++++++++...+ +++|+|||+.|..+..                          
T Consensus        91 ~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v--------------------------  144 (289)
T KOG1209|consen   91 QSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV--------------------------  144 (289)
T ss_pred             CCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe--------------------------
Confidence            9988889999999999999999999999999999755 6779999999999955                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                    +++..+.|.+||+|+.++++.|+.|+++.    |++|..+.||.|.|++....
T Consensus       145 --------------pfpf~~iYsAsKAAihay~~tLrlEl~PF----gv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  145 --------------PFPFGSIYSASKAAIHAYARTLRLELKPF----GVRVINAITGGVATDIADKR  193 (289)
T ss_pred             --------------ccchhhhhhHHHHHHHHhhhhcEEeeecc----ccEEEEecccceecccccCC
Confidence                          45556999999999999999999999999    78899999999999997653

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-29  Score=200.91  Aligned_cols=158  Identities=19%  Similarity=0.177  Sum_probs=139.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||+++++.|+++  ..|++.+|+..        ...+|++++++++.++++    ++++|++|||+|.....+
T Consensus         5 ItGas~giG~~la~~l~~~--~~vi~~~r~~~--------~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~~~~~   70 (199)
T PRK07578          5 VIGASGTIGRAVVAELSKR--HEVITAGRSSG--------DVQVDITDPASIRALFEK----VGKVDAVVSAAGKVHFAP   70 (199)
T ss_pred             EEcCCcHHHHHHHHHHHhc--CcEEEEecCCC--------ceEecCCChHHHHHHHHh----cCCCCEEEECCCCCCCCc
Confidence            7999999999999999998  67888888764        235899999999998875    478999999999876677


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                      +.+.+.+.|++.+++|+.+++.++++++|+|+++++|+++||..+..                                 
T Consensus        71 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~---------------------------------  117 (199)
T PRK07578         71 LAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE---------------------------------  117 (199)
T ss_pred             hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC---------------------------------
Confidence            77888899999999999999999999999998889999999988743                                 


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                             +.++...|+++|+++++|+++++.|+ +.    |++||+|+||+++|++.
T Consensus       118 -------~~~~~~~Y~~sK~a~~~~~~~la~e~-~~----gi~v~~i~Pg~v~t~~~  162 (199)
T PRK07578        118 -------PIPGGASAATVNGALEGFVKAAALEL-PR----GIRINVVSPTVLTESLE  162 (199)
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHc-cC----CeEEEEEcCCcccCchh
Confidence                   34456899999999999999999999 55    79999999999999974

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.1e-29  Score=202.33  Aligned_cols=166  Identities=19%  Similarity=0.202  Sum_probs=139.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||+++++.|+++ +..|++.+|+.++++...+.+    ..+|++++++++.+++++.+   ++|++|||+|..
T Consensus         5 ItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~   80 (223)
T PRK05884          5 VTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPS   80 (223)
T ss_pred             EEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCcc
Confidence            7999999999999999999 558888899888777665443    23899999999999988753   699999999853


Q ss_pred             cc------cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          77 FK------VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        77 ~~------~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ..      ..+.+ +.++|++++++|+.++++++++++|.|+++|+||++||...                         
T Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~-------------------------  134 (223)
T PRK05884         81 WDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP-------------------------  134 (223)
T ss_pred             ccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC-------------------------
Confidence            21      12223 46889999999999999999999999988899999998652                         


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         ++...|+++|+|+.+|+++++.++.+.    ||+||+|+||+++|++...
T Consensus       135 -------------------~~~~~Y~asKaal~~~~~~la~e~~~~----gI~v~~v~PG~v~t~~~~~  180 (223)
T PRK05884        135 -------------------PAGSAEAAIKAALSNWTAGQAAVFGTR----GITINAVACGRSVQPGYDG  180 (223)
T ss_pred             -------------------CCccccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCccCchhhhh
Confidence                               123789999999999999999999987    7999999999999997543

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.3e-29  Score=205.29  Aligned_cols=174  Identities=27%  Similarity=0.362  Sum_probs=149.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||.+++++|+++ +..|++++|+.+++++..+++.        .+|+++++++.++++++.+.++++|++|||
T Consensus         7 ItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~   85 (257)
T PRK07024          7 ITGASSGIGQALAREYARQ-GATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVVIAN   85 (257)
T ss_pred             EEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            7999999999999999999 5588889998887776655432        289999999999999999999999999999


Q ss_pred             cCCccccCCCC-CChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          73 AAIAFKVNSSE-PFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        73 ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      +|........+ .+.+.+++++++|+.|++.+++.++|.|++  .++||++||.++..                      
T Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~----------------------  143 (257)
T PRK07024         86 AGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR----------------------  143 (257)
T ss_pred             CCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC----------------------
Confidence            99865433333 677899999999999999999999998854  48999999988843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|++||++++.++++++.+++..    |+++++|+||+++|++...
T Consensus       144 ------------------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~  191 (257)
T PRK07024        144 ------------------GLPGAGAYSASKAAAIKYLESLRVELRPA----GVRVVTIAPGYIRTPMTAH  191 (257)
T ss_pred             ------------------CCCCCcchHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCCCcCchhhc
Confidence                              34455889999999999999999999886    7889999999999998653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=6e-29  Score=193.19  Aligned_cols=170  Identities=26%  Similarity=0.371  Sum_probs=150.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||+++|++|.+. +..|++++|+.++++++......     ||+.|.++.+++++++.++++.+++||||||+
T Consensus        10 ITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGI   88 (245)
T COG3967          10 ITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGI   88 (245)
T ss_pred             EeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeeecccc
Confidence            7999999999999999999 88999999999999998877665     99999999999999999999999999999999


Q ss_pred             ccccCCC--CCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          76 AFKVNSS--EPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        76 ~~~~~~~--~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      ..+..+.  +...+..++.+.+|+.+++.+++.++|.+.+  .+.||++||..+..+                       
T Consensus        89 qr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP-----------------------  145 (245)
T COG3967          89 QRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP-----------------------  145 (245)
T ss_pred             cchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc-----------------------
Confidence            7654444  2344667889999999999999999998754  489999999888552                       


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                       -...+.||++|+|+..++.+|+..++..    +++|.-+.|-.|+|+
T Consensus       146 -----------------m~~~PvYcaTKAaiHsyt~aLR~Qlk~t----~veVIE~~PP~V~t~  188 (245)
T COG3967         146 -----------------MASTPVYCATKAAIHSYTLALREQLKDT----SVEVIELAPPLVDTT  188 (245)
T ss_pred             -----------------ccccccchhhHHHHHHHHHHHHHHhhhc----ceEEEEecCCceecC
Confidence                             2234899999999999999999999997    688999999999996

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.96  E-value=5.4e-29  Score=206.22  Aligned_cols=173  Identities=24%  Similarity=0.306  Sum_probs=152.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||.++++.|+++ +..|++.+|+.+.++...+.+.      .+|++|+++++.+++++.+.++++|++|||+|
T Consensus        11 ItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag   89 (257)
T PRK07067         11 LTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAA   89 (257)
T ss_pred             EeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5688889999887776655432      38999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      .....++.+.+.++|++++++|+.+++.+++++++.|.+   +++||++||..+..                        
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------------  145 (257)
T PRK07067         90 LFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR------------------------  145 (257)
T ss_pred             cCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC------------------------
Confidence            876677778889999999999999999999999998843   37999999987633                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                      +.++...|++||++++.++++++.++.+.    ||++|+|.||+++|++.+
T Consensus       146 ----------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~pg~v~t~~~~  192 (257)
T PRK07067        146 ----------------GEALVSHYCATKAAVISYTQSAALALIRH----GINVNAIAPGVVDTPMWD  192 (257)
T ss_pred             ----------------CCCCCchhhhhHHHHHHHHHHHHHHhccc----CeEEEEEeeCcccchhhh
Confidence                            34466899999999999999999999876    799999999999999754

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=7.1e-29  Score=211.04  Aligned_cols=171  Identities=24%  Similarity=0.291  Sum_probs=145.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|. .|++.++. ....+...+++.         .+|++|+++++++++++.+ ++++|+||
T Consensus        17 VTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li   94 (306)
T PRK07792         17 VTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGGLDIVV   94 (306)
T ss_pred             EECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEE
Confidence            799999999999999999955 66666664 444555544443         2899999999999999999 99999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---------CceEEEecCCCccccccchHHHHHHhhh
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---------HGRVVNVSSSCGHLCHVTSEALKKKLLH  141 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---------~g~ii~~sS~~~~~~~~~~~~~~~~~~~  141 (230)
                      ||||...+..+.+.+.++|++++++|+.|++.++++++++|++         .|+||++||..+..              
T Consensus        95 ~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  160 (306)
T PRK07792         95 NNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV--------------  160 (306)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc--------------
Confidence            9999987777788889999999999999999999999988853         26999999988744              


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         142 EIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                                +.++...|+++|+++++|+++++.++.+.    ||+||+|+||. .|+|..
T Consensus       161 --------------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~----gI~vn~i~Pg~-~t~~~~  206 (306)
T PRK07792        161 --------------------------GPVGQANYGAAKAGITALTLSAARALGRY----GVRANAICPRA-RTAMTA  206 (306)
T ss_pred             --------------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEECCCC-CCchhh
Confidence                                      33455889999999999999999999887    79999999994 888754

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.96  E-value=1.2e-28  Score=204.01  Aligned_cols=173  Identities=22%  Similarity=0.305  Sum_probs=149.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++ +..|++.+|+.+.++....++.         .+|++++++++++++.+.+.++++|++||
T Consensus        16 VtG~s~gIG~~la~~l~~~-G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   94 (255)
T PRK06113         16 ITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVN   94 (255)
T ss_pred             EECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5577788888777666554432         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|...+.++ +.+.+.|++.+++|+.+++.++++++|.|++  .++||++||..+..                      
T Consensus        95 ~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------------  151 (255)
T PRK06113         95 NAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----------------------  151 (255)
T ss_pred             CCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC----------------------
Confidence            9998655444 5778999999999999999999999998863  37999999988733                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +..+...|+++|+++++++++++.++...    ||+||+|+||+++|++...
T Consensus       152 ------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~----~i~v~~v~pg~~~t~~~~~  199 (255)
T PRK06113        152 ------------------KNINMTSYASSKAAASHLVRNMAFDLGEK----NIRVNGIAPGAILTDALKS  199 (255)
T ss_pred             ------------------CCCCcchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEeccccccccccc
Confidence                              44456899999999999999999999887    7899999999999998654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.96  E-value=8.3e-29  Score=211.38  Aligned_cols=209  Identities=20%  Similarity=0.253  Sum_probs=150.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++|...|++++|+.+++++..+++.         .+|+++.++++++++++.+.+++||++||
T Consensus         8 ITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~   87 (314)
T TIGR01289         8 ITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVC   87 (314)
T ss_pred             EECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            799999999999999999952788889999887776655543         28999999999999999888899999999


Q ss_pred             ccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC----ceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          72 NAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        72 ~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~----g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||+..+ ....+.+.+.|++++++|+.|++.+++.++|.|++.    ++||++||..+........ .    . +..+.
T Consensus        88 nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~-~----~-~~~~~  161 (314)
T TIGR01289        88 NAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGN-V----P-PKANL  161 (314)
T ss_pred             CCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCc-C----C-Ccccc
Confidence            9997543 223456789999999999999999999999999643    7999999998743210000 0    0 00000


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc-ccCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV-NTDMSSG  219 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v-~t~~~~~  219 (230)
                      ..+......+... .......+..+...|++||+|+..+++.+++++...   .|++|++|+||+| +|+|.+.
T Consensus       162 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~---~gi~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       162 GDLSGLAAGFKAP-IAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDE---TGITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             cccccccccCCCc-ccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccC---CCeEEEEecCCcccCCccccc
Confidence            0000000000000 000001223345789999999999999999988531   2699999999999 7998754

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=8.1e-29  Score=204.92  Aligned_cols=174  Identities=29%  Similarity=0.439  Sum_probs=153.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++.+|++++++...+.+..         +|++|+++++++++++.+.++++|+|||
T Consensus        15 ItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~   93 (255)
T PRK07523         15 VTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVN   93 (255)
T ss_pred             EECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 45788899998877666555432         7999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|...+.++.+.+.+.|++++++|+.+++++++++.+.|++  .++||++||..+..                      
T Consensus        94 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------------------  151 (255)
T PRK07523         94 NAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL----------------------  151 (255)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc----------------------
Confidence            999987777888899999999999999999999999998854  48999999987633                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|+++|++++.++++++.++.++    ||+||+|.||+++|++...
T Consensus       152 ------------------~~~~~~~y~~sK~a~~~~~~~~a~e~~~~----gi~v~~i~pg~~~t~~~~~  199 (255)
T PRK07523        152 ------------------ARPGIAPYTATKGAVGNLTKGMATDWAKH----GLQCNAIAPGYFDTPLNAA  199 (255)
T ss_pred             ------------------CCCCCccHHHHHHHHHHHHHHHHHHhhHh----CeEEEEEEECcccCchhhh
Confidence                              34456899999999999999999999987    7899999999999998653

>PRK06182 short chain dehydrogenase; Validated

Probab=99.96  E-value=8.2e-29  Score=207.03  Aligned_cols=172  Identities=29%  Similarity=0.368  Sum_probs=150.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh---hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK---LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~---~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||++|||++++++|+++ ++.|++.+|+.++++.....   +..+|++|+++++.+++++.+.++++|+||||+|...
T Consensus         8 ItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~   86 (273)
T PRK06182          8 VTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGS   86 (273)
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            7999999999999999999 56888889988777654332   2238999999999999999999999999999999987


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ..++.+.+.+.+++++++|+.+++.+++.++|.|++.  ++||++||..+..                            
T Consensus        87 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------------------------  138 (273)
T PRK06182         87 YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI----------------------------  138 (273)
T ss_pred             CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC----------------------------
Confidence            7778888999999999999999999999999999653  7999999987633                            


Q ss_pred             HHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                  +.+....|+++|+++++++++++.++.+.    |+++++|+||+++|++.
T Consensus       139 ------------~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        139 ------------YTPLGAWYHATKFALEGFSDALRLEVAPF----GIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             ------------CCCCccHhHHHHHHHHHHHHHHHHHhccc----CCEEEEEecCCcccccc
Confidence                        22334689999999999999999999876    78899999999999975

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-28  Score=205.69  Aligned_cols=174  Identities=33%  Similarity=0.403  Sum_probs=151.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh---hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK---LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~---~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||++|||+++++.|+++ +..|++++|+.+.++.....   ...+|++++++++++++++.+.++++|+||||+|...
T Consensus         6 ItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   84 (274)
T PRK05693          6 ITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGA   84 (274)
T ss_pred             EecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            7999999999999999999 56888889987766554322   2238999999999999999999999999999999877


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      ..++.+.+.+.+++++++|+.|++.++++++|.|++. ++||++||..+..                             
T Consensus        85 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------------------------  135 (274)
T PRK05693         85 MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVL-----------------------------  135 (274)
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccC-----------------------------
Confidence            6777788899999999999999999999999988654 8999999988843                             


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                 +.+....|+++|++++.++++++.++...    ||+|++|+||+++|++.+.
T Consensus       136 -----------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~----gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        136 -----------VTPFAGAYCASKAAVHALSDALRLELAPF----GVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEecCccccccccc
Confidence                       33345889999999999999999999887    7889999999999998764

>PRK06194 hypothetical protein; Provisional

Probab=99.96  E-value=1.3e-28  Score=207.08  Aligned_cols=176  Identities=22%  Similarity=0.230  Sum_probs=151.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.++...+++.         .+|++|.++++++++++.+.++++|+|||
T Consensus        11 VtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~   89 (287)
T PRK06194         11 ITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFN   89 (287)
T ss_pred             EeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 4578888998777666554432         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--------ceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--------GRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--------g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      |||.....++.+.+.+.|++++++|+.|++.++++++|.|.+.        ++||++||.++..                
T Consensus        90 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------  153 (287)
T PRK06194         90 NAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL----------------  153 (287)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc----------------
Confidence            9999877777788899999999999999999999999988532        6899999988854                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                              +.++...|+++|++++.++++++.++.....  ++++++++||++.|++...
T Consensus       154 ------------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~--~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        154 ------------------------APPAMGIYNVSKHAVVSLTETLYQDLSLVTD--QVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             ------------------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCC--CeEEEEEEeCcccCccccc
Confidence                                    3345588999999999999999999876432  4999999999999998654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1.3e-28  Score=202.77  Aligned_cols=174  Identities=27%  Similarity=0.273  Sum_probs=150.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++|+.++++..|+.++.++..++++         .+|++|++++..+++++.+.++++|+|||
T Consensus         9 ItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   88 (250)
T PRK08063          9 VTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVN   88 (250)
T ss_pred             EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            799999999999999999965555556788777666555543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|.....++.+.+.+.+++++++|+.+++.+++++++.|++  .++||++||..+..                      
T Consensus        89 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------------  146 (250)
T PRK08063         89 NAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR----------------------  146 (250)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc----------------------
Confidence            999877777888889999999999999999999999998864  47999999977632                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+++|+++++++++++.++...    |+++|+|.||++.|++..
T Consensus       147 ------------------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~----~i~v~~i~pg~v~t~~~~  193 (250)
T PRK08063        147 ------------------YLENYTTVGVSKAALEALTRYLAVELAPK----GIAVNAVSGGAVDTDALK  193 (250)
T ss_pred             ------------------CCCCccHHHHHHHHHHHHHHHHHHHHhHh----CeEEEeEecCcccCchhh
Confidence                              33455899999999999999999999876    799999999999998754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-28  Score=204.50  Aligned_cols=168  Identities=26%  Similarity=0.301  Sum_probs=143.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|++. .+...+++         ..+|+++++++.++++++.+.++++|+|||
T Consensus        13 VtGas~gIG~~la~~l~~~-G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   90 (260)
T PRK12823         13 VTGAAQGIGRGVALRAAAE-GARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLIN   90 (260)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence            7999999999999999999 457888888753 33333332         128999999999999999999999999999


Q ss_pred             ccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.. ...++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..                     
T Consensus        91 nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------------------  149 (260)
T PRK12823         91 NVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG---------------------  149 (260)
T ss_pred             CCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC---------------------
Confidence            99964 3456777888999999999999999999999999864  37999999987631                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                           .+..+|++||++++.|+++++.++.+.    ||+||+|+||++.|++
T Consensus       150 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        150 ---------------------INRVPYSAAKGGVNALTASLAFEYAEH----GIRVNAVAPGGTEAPP  192 (260)
T ss_pred             ---------------------CCCCccHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCccCCcc
Confidence                                 123689999999999999999999887    7889999999999986

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-28  Score=206.63  Aligned_cols=174  Identities=21%  Similarity=0.277  Sum_probs=147.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-------hHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-------GQEALEKLQ---------KLDILDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-------~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~   64 (230)
                      ||||++|||.++++.|+++ +..|++++|+.+.       +++..+++.         .+|++++++++++++++.+.++
T Consensus        11 ItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   89 (273)
T PRK08278         11 ITGASRGIGLAIALRAARD-GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFG   89 (273)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            7999999999999999999 4578888886542       333333332         2899999999999999999999


Q ss_pred             CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          65 GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        65 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                      ++|+||||+|.....++.+.+.++|++++++|+.|++.++++++|+|++  .++||++||..+..               
T Consensus        90 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------------  154 (273)
T PRK08278         90 GIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---------------  154 (273)
T ss_pred             CCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---------------
Confidence            9999999999877777888889999999999999999999999999864  47999999876522               


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCC--CCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCC-ccccCCCCC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGG--WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPG-YVNTDMSSG  219 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG-~v~t~~~~~  219 (230)
                                               +.  ++...|++||++++.++++++.++.+.    ||+||+|+|| +++|++.+.
T Consensus       155 -------------------------~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~----~I~v~~i~Pg~~i~t~~~~~  205 (273)
T PRK08278        155 -------------------------PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDD----GIAVNALWPRTTIATAAVRN  205 (273)
T ss_pred             -------------------------ccccCCcchhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeCCCccccHHHHh
Confidence                                     22  456899999999999999999999986    7899999999 689986543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.96  E-value=1.2e-28  Score=202.61  Aligned_cols=175  Identities=29%  Similarity=0.392  Sum_probs=148.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++|+..++..+++....+...+++.         .+|++|.++++++++++.+.++++|+|||
T Consensus         8 VtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   87 (246)
T PRK12938          8 VTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVN   87 (246)
T ss_pred             EECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            799999999999999999965444445555555444444332         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|.....++.+.+.+.|++++++|+.+++.+++++++.|++.  ++||++||..+..                      
T Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------------  145 (246)
T PRK12938         88 NAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----------------------  145 (246)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC----------------------
Confidence            9998766677788999999999999999999999999988644  7999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +..+...|+++|++++.++++++.++...    |+++|+|+||+++|++.+.
T Consensus       146 ------------------~~~~~~~y~~sK~a~~~~~~~l~~~~~~~----gi~v~~i~pg~~~t~~~~~  193 (246)
T PRK12938        146 ------------------GQFGQTNYSTAKAGIHGFTMSLAQEVATK----GVTVNTVSPGYIGTDMVKA  193 (246)
T ss_pred             ------------------CCCCChhHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEecccCCchhhh
Confidence                              34456899999999999999999999876    7889999999999998654

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-28  Score=204.52  Aligned_cols=168  Identities=24%  Similarity=0.277  Sum_probs=145.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      |||+++|||+++++.|+++| ..|++++|++++++...+++.          .+|++++++++.++++    ++++|++|
T Consensus        12 ItG~~~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g~id~lv   86 (259)
T PRK06125         12 ITGASKGIGAAAAEAFAAEG-CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AGDIDILV   86 (259)
T ss_pred             EeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hCCCCEEE
Confidence            79999999999999999995 488889998887766544432          2899999999988764    47999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||+|...+.++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..                     
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---------------------  145 (259)
T PRK06125         87 NNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN---------------------  145 (259)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC---------------------
Confidence            9999877777888999999999999999999999999999964  38999999987732                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                         +..++..|+++|+++.+++++++.++.+.    ||+||+|+||+++|++.
T Consensus       146 -------------------~~~~~~~y~ask~al~~~~~~la~e~~~~----gi~v~~i~PG~v~t~~~  191 (259)
T PRK06125        146 -------------------PDADYICGSAGNAALMAFTRALGGKSLDD----GVRVVGVNPGPVATDRM  191 (259)
T ss_pred             -------------------CCCCchHhHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecCccccHHH
Confidence                               34456789999999999999999999887    79999999999999963

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.6e-29  Score=207.20  Aligned_cols=193  Identities=20%  Similarity=0.238  Sum_probs=140.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      |||+ +|||++++++|+ + +..|++++|+.++++...+++.         .+|++|+++++++++++ +.++++|+|||
T Consensus         7 ItGa-~gIG~~la~~l~-~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~   82 (275)
T PRK06940          7 VIGA-GGIGQAIARRVG-A-GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVTGLVH   82 (275)
T ss_pred             EECC-ChHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEE
Confidence            6887 699999999996 6 6788889998877766554432         28999999999999998 56899999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |||...       ..+.|++++++|+.|++.++++++|.|++++++|++||..+...+..... ..++.. ..+...+..
T Consensus        83 nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~-~~~~~~-~~~~~~~~~  153 (275)
T PRK06940         83 TAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAE-QERALA-TTPTEELLS  153 (275)
T ss_pred             CCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchh-hhcccc-ccccccccc
Confidence            999742       23679999999999999999999999988899999999988543210000 000000 000000000


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                      .       ... +......+...|++||+|+.+++++++.++.+.    ||+||+|+||+++|++..
T Consensus       154 ~-------~~~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gIrvn~i~PG~v~T~~~~  208 (275)
T PRK06940        154 L-------PFL-QPDAIEDSLHAYQIAKRANALRVMAEAVKWGER----GARINSISPGIISTPLAQ  208 (275)
T ss_pred             c-------ccc-cccccCCccchhHHHHHHHHHHHHHHHHHHccC----CeEEEEeccCcCcCccch
Confidence            0       000 000000235789999999999999999999876    799999999999999864

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.8e-28  Score=204.42  Aligned_cols=173  Identities=23%  Similarity=0.310  Sum_probs=151.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||+||||++++++|+++ +..|++++|++++++......      ..+|++|++++.++++++.+.++++|+||||+|
T Consensus         9 VtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag   87 (277)
T PRK06180          9 ITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAG   87 (277)
T ss_pred             EecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            7999999999999999999 567889999887766554321      238999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....+..+.+.+.|++++++|+.|++.++++++|.|++  .++||++||.++..                         
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~-------------------------  142 (277)
T PRK06180         88 YGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI-------------------------  142 (277)
T ss_pred             ccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC-------------------------
Confidence            977777888888999999999999999999999998864  37999999988843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                     +.++...|+++|+++++++++++.++...    |+++++|.||++.|++..
T Consensus       143 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        143 ---------------TMPGIGYYCGSKFALEGISESLAKEVAPF----GIHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             ---------------CCCCcchhHHHHHHHHHHHHHHHHHhhhh----CcEEEEEecCCcccCccc
Confidence                           34456899999999999999999999887    788999999999998754

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.96  E-value=1.3e-28  Score=202.68  Aligned_cols=174  Identities=30%  Similarity=0.413  Sum_probs=146.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||++|||.+++++|+++ +..|++++|+.. .........      ..+|++++++++.+++++.+.++++|++|||+
T Consensus        10 ItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~a   88 (248)
T TIGR01832        10 VTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNA   88 (248)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            7999999999999999999 457887888642 222222221      23899999999999999999999999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |...+.++.+.+.+.|++++++|+.+++.+++++++.|++   .++||++||..++.                       
T Consensus        89 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------------------  145 (248)
T TIGR01832        89 GIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ-----------------------  145 (248)
T ss_pred             CCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc-----------------------
Confidence            9977677777888999999999999999999999998853   47999999987743                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       +.++...|+.+|+++++++++++.++.+.    |++||+|+||+++|++.+.
T Consensus       146 -----------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~pg~v~t~~~~~  193 (248)
T TIGR01832       146 -----------------GGIRVPSYTASKHGVAGLTKLLANEWAAK----GINVNAIAPGYMATNNTQA  193 (248)
T ss_pred             -----------------CCCCCchhHHHHHHHHHHHHHHHHHhCcc----CcEEEEEEECcCcCcchhc
Confidence                             23345789999999999999999999887    7899999999999998653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-28  Score=204.12  Aligned_cols=174  Identities=30%  Similarity=0.375  Sum_probs=151.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||.+++++|+++| ..|++++|+.+.++...+++.          .+|++++++++++++++.+.++++|+||
T Consensus         5 ItGas~giG~~la~~la~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   83 (272)
T PRK07832          5 VTGAASGIGRATALRLAAQG-AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVM   83 (272)
T ss_pred             EeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999995 578888998877666554432          3899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||+|.....++.+.+.+.|++++++|+.|++.++++++|.|.+   .++||++||..+..                    
T Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--------------------  143 (272)
T PRK07832         84 NIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV--------------------  143 (272)
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC--------------------
Confidence            9999876667778899999999999999999999999998843   47999999987733                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                          +.+....|+++|+++.+++++++.++...    ||+|++|+||+++|++.+.
T Consensus       144 --------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~----~i~v~~v~Pg~v~t~~~~~  191 (272)
T PRK07832        144 --------------------ALPWHAAYSASKFGLRGLSEVLRFDLARH----GIGVSVVVPGAVKTPLVNT  191 (272)
T ss_pred             --------------------CCCCCcchHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCcccCcchhc
Confidence                                33445789999999999999999999876    7889999999999998653

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-28  Score=203.92  Aligned_cols=174  Identities=29%  Similarity=0.434  Sum_probs=153.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+||||++++++|+++ +..|++++|+.++++.....+.         .+|++++++++++++++.+.++++|+|||
T Consensus         5 VtGasggIG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~   83 (270)
T PRK05650          5 ITGAASGLGRAIALRWARE-GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVN   83 (270)
T ss_pred             EecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5678888998887776655443         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|......+.+.+.+.+++++++|+.+++.+++.++|.|++.  ++||++||..+..                      
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------------  141 (270)
T PRK05650         84 NAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM----------------------  141 (270)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC----------------------
Confidence            9999877778888889999999999999999999999998643  7999999988843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|+++|+++++++++++.++...    |+++++|+||+++|++...
T Consensus       142 ------------------~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~  189 (270)
T PRK05650        142 ------------------QGPAMSSYNVAKAGVVALSETLLVELADD----EIGVHVVCPSFFQTNLLDS  189 (270)
T ss_pred             ------------------CCCCchHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCccccCcccc
Confidence                              34456899999999999999999999877    7889999999999998654

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-28  Score=202.20  Aligned_cols=173  Identities=26%  Similarity=0.273  Sum_probs=151.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||.+++++|+++| ..|++++|+.+.+++..+++.      .+|+++++++..+++++.+.++++|++|||+|
T Consensus        11 ItGasg~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   89 (249)
T PRK06500         11 ITGGTSGIGLETARQFLAEG-ARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAG   89 (249)
T ss_pred             EeCCCchHHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            79999999999999999994 578888998776666554432      38999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      .....++.+.+.+.|++++++|+.+++.++++++|+|++.+++|+++|..+.+                           
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~---------------------------  142 (249)
T PRK06500         90 VAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHI---------------------------  142 (249)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhcc---------------------------
Confidence            87666677888999999999999999999999999998778999999877743                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                   +.++...|+.+|+++++++++++.++...    |+++++|.||+++|++.+
T Consensus       143 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~pg~~~t~~~~  189 (249)
T PRK06500        143 -------------GMPNSSVYAASKAALLSLAKTLSGELLPR----GIRVNAVSPGPVQTPLYG  189 (249)
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcCCCHHHH
Confidence                         34456899999999999999999999876    799999999999999754

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-28  Score=200.56  Aligned_cols=172  Identities=28%  Similarity=0.299  Sum_probs=146.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++++.|+++|+ .|+++.+ ++...+...+++.         .+|++++++++++++++.+.++++|++|
T Consensus        10 ItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi   88 (245)
T PRK12937         10 VTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLV   88 (245)
T ss_pred             EeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799999999999999999965 5555554 4444444433332         3899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||+|.....++.+.+.+.|++++++|+.+++.+++++++.|++.++||++||.++..                       
T Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------------------  145 (245)
T PRK12937         89 NNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL-----------------------  145 (245)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-----------------------
Confidence            999987666677788899999999999999999999999998889999999987733                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                       +.++...|+.+|++++.++++++.++...    |+++++|+||+++|+|.
T Consensus       146 -----------------~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~----~i~v~~i~pg~~~t~~~  191 (245)
T PRK12937        146 -----------------PLPGYGPYAASKAAVEGLVHVLANELRGR----GITVNAVAPGPVATELF  191 (245)
T ss_pred             -----------------CCCCCchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCCccCchh
Confidence                             34456899999999999999999999886    78999999999999984

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-28  Score=204.69  Aligned_cols=173  Identities=23%  Similarity=0.276  Sum_probs=145.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc--c
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF--K   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~--~   78 (230)
                      ||||++|||+++++.|+++ +..|++++|+++......-.+..+|++|+++++++++++.+.++++|+||||||...  .
T Consensus        14 ItGas~gIG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   92 (260)
T PRK06523         14 VTGGTKGIGAATVARLLEA-GARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPA   92 (260)
T ss_pred             EECCCCchhHHHHHHHHHC-CCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCC
Confidence            7999999999999999999 557888888765322111123348999999999999999999999999999999753  3


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      .++.+.+.+.|++++++|+.+++.++++++|.|++.  ++||++||..+..                             
T Consensus        93 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------------------------  143 (260)
T PRK06523         93 GGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRL-----------------------------  143 (260)
T ss_pred             CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------------------------
Confidence            456677889999999999999999999999999643  7999999988743                             


Q ss_pred             HHHhhcCCCcCCCC-CCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         157 VELAQDGSHTKGGW-PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       157 ~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                 +.+ +...|+++|+++++++++++.++.+.    ||++|+|+||+++|++..
T Consensus       144 -----------~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~----gi~v~~i~Pg~v~t~~~~  191 (260)
T PRK06523        144 -----------PLPESTTAYAAAKAALSTYSKSLSKEVAPK----GVRVNTVSPGWIETEAAV  191 (260)
T ss_pred             -----------CCCCCcchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCcccCccHH
Confidence                       211 45899999999999999999999987    788999999999999853

>PRK05717 oxidoreductase; Validated

Probab=99.96  E-value=2.5e-28  Score=202.15  Aligned_cols=172  Identities=29%  Similarity=0.369  Sum_probs=147.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++++.|+++ +..|++++|+..+.+...+.+.      .+|+++++++.++++++.+.++++|++|||||
T Consensus        15 ItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   93 (255)
T PRK05717         15 VTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAA   93 (255)
T ss_pred             EeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            7999999999999999999 4578888887766665544332      38999999999999999999999999999999


Q ss_pred             Cccc--cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          75 IAFK--VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        75 ~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      ...+  .++.+.+.++|++++++|+.+++.++++++|.|++ .++||++||..+..                        
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~------------------------  149 (255)
T PRK05717         94 IADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ------------------------  149 (255)
T ss_pred             cccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC------------------------
Confidence            8643  45667788999999999999999999999998854 58999999988744                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                      +.+....|+++|++++.++++++.++...     ++||+|+||+++|++..
T Consensus       150 ----------------~~~~~~~Y~~sKaa~~~~~~~la~~~~~~-----i~v~~i~Pg~i~t~~~~  195 (255)
T PRK05717        150 ----------------SEPDTEAYAASKGGLLALTHALAISLGPE-----IRVNAVSPGWIDARDPS  195 (255)
T ss_pred             ----------------CCCCCcchHHHHHHHHHHHHHHHHHhcCC-----CEEEEEecccCcCCccc
Confidence                            33345789999999999999999998763     88999999999998754

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.96  E-value=1.9e-28  Score=204.35  Aligned_cols=170  Identities=23%  Similarity=0.189  Sum_probs=135.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhhh----------cccCCCHHHH----HHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKLQ----------KLDILDKNSI----KALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~~----------~~D~s~~~~v----~~~~~~~~~~~~~   65 (230)
                      ||||++|||++++++|+++|. .|+++ .++.+.++...+++.          .+|++|++++    +++++++.+.+++
T Consensus         6 ITGas~gIG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~   84 (267)
T TIGR02685         6 VTGAAKRIGSSIAVALHQEGY-RVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGR   84 (267)
T ss_pred             EeCCCCcHHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCC
Confidence            799999999999999999955 55554 455666665544442          2899999855    6677777778899


Q ss_pred             CcEEEEccCCccccCCCCCCh-----------hHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCcc
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFG-----------SQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGH  126 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~  126 (230)
                      +|+||||||...+.++.+.+.           +.|.+++++|+.+++.++++++|.|+.        .++||+++|..+.
T Consensus        85 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~  164 (267)
T TIGR02685        85 CDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTD  164 (267)
T ss_pred             ceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhcc
Confidence            999999999865554443333           358899999999999999999998842        2589999988773


Q ss_pred             ccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEE
Q psy7994         127 LCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNC  206 (230)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~  206 (230)
                      .                                        +.++..+|++||+++++++++++.++.+.    ||+|++
T Consensus       165 ~----------------------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~  200 (267)
T TIGR02685       165 Q----------------------------------------PLLGFTMYTMAKHALEGLTRSAALELAPL----QIRVNG  200 (267)
T ss_pred             C----------------------------------------CCcccchhHHHHHHHHHHHHHHHHHHhhh----CeEEEE
Confidence            2                                        34456899999999999999999999887    799999


Q ss_pred             ecCCccccC
Q psy7994         207 VHPGYVNTD  215 (230)
Q Consensus       207 v~pG~v~t~  215 (230)
                      |+||++.|+
T Consensus       201 v~PG~~~~~  209 (267)
T TIGR02685       201 VAPGLSLLP  209 (267)
T ss_pred             EecCCccCc
Confidence            999998765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06196 oxidoreductase; Provisional

Probab=99.96  E-value=2.8e-28  Score=208.13  Aligned_cols=184  Identities=24%  Similarity=0.331  Sum_probs=149.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++.     .+|++|.++++++++++.+.++++|+||||||.
T Consensus        31 ITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~  109 (315)
T PRK06196         31 VTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGV  109 (315)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCC
Confidence            7999999999999999999 5678889999887776655433     389999999999999999999999999999998


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      ...  ....+.+.|+..+++|+.|++.+++.++|.|++.  ++||++||.++...+...+                    
T Consensus       110 ~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~--------------------  167 (315)
T PRK06196        110 MAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWD--------------------  167 (315)
T ss_pred             CCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcc--------------------
Confidence            542  2345668899999999999999999999998654  7999999976533211110                    


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                              +.+...+..+...|+.||+++..+++.++.++...    ||+|++|+||++.|++.+.
T Consensus       168 --------~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~----gi~v~~v~PG~v~t~~~~~  221 (315)
T PRK06196        168 --------DPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQ----GVRAFSVHPGGILTPLQRH  221 (315)
T ss_pred             --------ccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeeCCcccCCcccc
Confidence                    00001233345789999999999999999999876    7889999999999998654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=3.5e-28  Score=201.17  Aligned_cols=174  Identities=25%  Similarity=0.422  Sum_probs=153.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||++++++|+++ +..|++++|+++.+++..+++.         .+|+++++++..+++++...++++|++||
T Consensus        16 ItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   94 (256)
T PRK06124         16 VTGSARGLGFEIARALAGA-GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVN   94 (256)
T ss_pred             EECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 5688999998877776655543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|.....++.+.+.+.|++.+++|+.+++.+++.+++.|.  +.++||++||..+..                      
T Consensus        95 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------------  152 (256)
T PRK06124         95 NVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV----------------------  152 (256)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc----------------------
Confidence            99987767778888999999999999999999999999885  348999999988743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|+++|+++.+++++++.++...    |+++++|+||+++|++.+.
T Consensus       153 ------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~i~pg~v~t~~~~~  200 (256)
T PRK06124        153 ------------------ARAGDAVYPAAKQGLTGLMRALAAEFGPH----GITSNAIAPGYFATETNAA  200 (256)
T ss_pred             ------------------CCCCccHhHHHHHHHHHHHHHHHHHHHHh----CcEEEEEEECCccCcchhh
Confidence                              34456899999999999999999999876    7889999999999998553

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.9e-28  Score=203.20  Aligned_cols=173  Identities=26%  Similarity=0.341  Sum_probs=153.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++.+|+.+.++...+.+.      ++|++|+++++.+++++.+.++++|++|||+|
T Consensus         8 ItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag   86 (275)
T PRK08263          8 ITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAG   86 (275)
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5678889998887766554432      38999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.+.|++++++|+.++++++++++|.|++  .++||++||.++..                         
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~-------------------------  141 (275)
T PRK08263         87 YGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS-------------------------  141 (275)
T ss_pred             CccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC-------------------------
Confidence            987788888899999999999999999999999999864  47999999988744                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                     +.++...|+.+|++++++++.++.++...    |++|++|.||+++|++..
T Consensus       142 ---------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        142 ---------------AFPMSGIYHASKWALEGMSEALAQEVAEF----GIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             ---------------CCCCccHHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEecCCccCCccc
Confidence                           33445889999999999999999999887    788999999999999874

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-28  Score=203.90  Aligned_cols=172  Identities=24%  Similarity=0.283  Sum_probs=145.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||+++++.|+++ +..|++.+++..+.+........+|++|+++++++++++.+.++++|++|||||...+..
T Consensus        14 ItG~s~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~   92 (266)
T PRK06171         14 VTGGSSGIGLAIVKELLAN-GANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRL   92 (266)
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCcc
Confidence            7999999999999999999 567888888776544322223348999999999999999999999999999999754322


Q ss_pred             ---------CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          81 ---------SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        81 ---------~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                               +.+.+.++|++++++|+.+++.+++++++.|++  .++||++||..+..                      
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  150 (266)
T PRK06171         93 LVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE----------------------  150 (266)
T ss_pred             ccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC----------------------
Confidence                     345788999999999999999999999999864  47999999998843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc-cCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN-TDMS  217 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~-t~~~  217 (230)
                                        +.++...|+++|+++++|+++++.++.+.    ||+||+|+||+++ |++.
T Consensus       151 ------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~----gi~v~~v~pG~~~~t~~~  197 (266)
T PRK06171        151 ------------------GSEGQSCYAATKAALNSFTRSWAKELGKH----NIRVVGVAPGILEATGLR  197 (266)
T ss_pred             ------------------CCCCCchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeccccccCCCc
Confidence                              34456899999999999999999999887    7999999999996 6653

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.7e-28  Score=203.38  Aligned_cols=175  Identities=31%  Similarity=0.416  Sum_probs=151.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH-HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL-EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~-~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||||+||||++++++|+++ +..|++.+|+.+..+... -.+..+|++|+++++++++++.+.++++|+||||+|.....
T Consensus         9 VtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~   87 (270)
T PRK06179          9 VTGASSGIGRATAEKLARA-GYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAG   87 (270)
T ss_pred             EecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc
Confidence            7999999999999999999 567888899876544321 12234899999999999999999999999999999998777


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      .+.+.+.+.+++++++|+.|++.++++++|.|++  .++||++||..+..                              
T Consensus        88 ~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------------------------  137 (270)
T PRK06179         88 AAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL------------------------------  137 (270)
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC------------------------------
Confidence            7788889999999999999999999999999864  37999999988743                              


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                +.+....|+++|+++++++++++.+++..    |+++++|.||+++|++....
T Consensus       138 ----------~~~~~~~Y~~sK~a~~~~~~~l~~el~~~----gi~v~~v~pg~~~t~~~~~~  186 (270)
T PRK06179        138 ----------PAPYMALYAASKHAVEGYSESLDHEVRQF----GIRVSLVEPAYTKTNFDANA  186 (270)
T ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEeCCCccccccccc
Confidence                      33445899999999999999999999987    78899999999999987643

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.3e-28  Score=200.38  Aligned_cols=173  Identities=22%  Similarity=0.260  Sum_probs=149.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-------LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||++|||.+++++|+++| ..|++++|+....+ ....       ...+|++++++++++++++.+.++++|++|||+
T Consensus        20 ItGas~~IG~~la~~l~~~G-~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a   97 (255)
T PRK06841         20 VTGGASGIGHAIAELFAAKG-ARVALLDRSEDVAE-VAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSA   97 (255)
T ss_pred             EECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            79999999999999999995 57888999875432 2222       223899999999999999999999999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |.....++.+.+.+.|++++++|+.|++.+++++++.|++  .++||++||..+..                        
T Consensus        98 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------------  153 (255)
T PRK06841         98 GVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV------------------------  153 (255)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc------------------------
Confidence            9876666777888999999999999999999999998864  47999999987743                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                      +.++...|+++|+++++++++++.++++.    |++||+|+||+++|++.+.
T Consensus       154 ----------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~pg~v~t~~~~~  201 (255)
T PRK06841        154 ----------------ALERHVAYCASKAGVVGMTKVLALEWGPY----GITVNAISPTVVLTELGKK  201 (255)
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHHHHhh----CeEEEEEEeCcCcCccccc
Confidence                            44456899999999999999999999987    7899999999999998653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.96  E-value=5.1e-28  Score=198.10  Aligned_cols=174  Identities=26%  Similarity=0.364  Sum_probs=146.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++++.|+++|. .|++++| +.+.++...+++.         .+|++++++++++++++.+.++++|++|
T Consensus         3 ItGas~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li   81 (239)
T TIGR01831         3 VTGASRGIGRAIANRLAADGF-EICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVV   81 (239)
T ss_pred             EeCCCchHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799999999999999999955 5666654 4455555444432         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhc-cccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILF-PLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~-~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||+|.....++.+.+.++|+.++++|+.++++++++++ |.++  +.++||++||..+..                    
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--------------------  141 (239)
T TIGR01831        82 LNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM--------------------  141 (239)
T ss_pred             ECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc--------------------
Confidence            99998766667778889999999999999999999875 5553  448999999988744                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                          +.++...|+++|+++.+++++++.++...    ||++++|+||+++|++...
T Consensus       142 --------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  189 (239)
T TIGR01831       142 --------------------GNRGQVNYSAAKAGLIGATKALAVELAKR----KITVNCIAPGLIDTEMLAE  189 (239)
T ss_pred             --------------------CCCCCcchHHHHHHHHHHHHHHHHHHhHh----CeEEEEEEEccCccccchh
Confidence                                34455899999999999999999999887    7899999999999999764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.8e-28  Score=200.64  Aligned_cols=173  Identities=20%  Similarity=0.212  Sum_probs=142.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc---chhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA---SRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~---~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||+++++.|+++|...+++..+..   +..+...+.+         ..+|++++++++++++++.+.++++|+
T Consensus        13 ItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   92 (257)
T PRK12744         13 IAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDI   92 (257)
T ss_pred             EECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCE
Confidence            7999999999999999999665455544322   2333333322         138999999999999999999999999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEe-cCCCccccccchHHHHHHhhhhchhHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNV-SSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~-sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      +|||||.....++.+.+.++|++++++|+.+++.++++++|.|++.++++++ ||..+..                    
T Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~--------------------  152 (257)
T PRK12744         93 AINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF--------------------  152 (257)
T ss_pred             EEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc--------------------
Confidence            9999998776777788889999999999999999999999999888888876 4443321                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           .+....|++||++++.|+++++.++.+.    ||+|++|+||++.|++..
T Consensus       153 ---------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~v~pg~v~t~~~~  198 (257)
T PRK12744        153 ---------------------TPFYSAYAGSKAPVEHFTRAASKEFGAR----GISVTAVGPGPMDTPFFY  198 (257)
T ss_pred             ---------------------CCCcccchhhHHHHHHHHHHHHHHhCcC----ceEEEEEecCccccchhc
Confidence                                 2234789999999999999999999976    799999999999999753

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.8e-28  Score=199.32  Aligned_cols=175  Identities=27%  Similarity=0.387  Sum_probs=151.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++| ..|++.+|+++++++....+.           .+|+++++++.++++++.+.++++|++
T Consensus         7 ItGas~giG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   85 (248)
T PRK08251          7 ITGASSGLGAGMAREFAAKG-RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRV   85 (248)
T ss_pred             EECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            79999999999999999995 688888998887766544332           389999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||+|+.....+.+.+.+.+++++++|+.+++.+++++++.|++  .++||++||..+..                    
T Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--------------------  145 (248)
T PRK08251         86 IVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVR--------------------  145 (248)
T ss_pred             EECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc--------------------
Confidence            99999987777777788899999999999999999999998864  47999999987743                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCC-CCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGW-PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                          +.+ +...|+.||++++++++.++.++...    |+++++|+||+++|++.+..
T Consensus       146 --------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~v~t~~~~~~  195 (248)
T PRK08251        146 --------------------GLPGVKAAYAASKAGVASLGEGLRAELAKT----PIKVSTIEPGYIRSEMNAKA  195 (248)
T ss_pred             --------------------CCCCCcccHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCcCcchhhhcc
Confidence                                222 24789999999999999999998865    78999999999999987654

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.8e-28  Score=199.45  Aligned_cols=171  Identities=22%  Similarity=0.223  Sum_probs=145.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||++++++|+++ +..|++++|+++++++..+..     ..+|++++++++++++++..   .+|++|||+|.
T Consensus         6 ItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~ag~   81 (240)
T PRK06101          6 ITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF---IPELWIFNAGD   81 (240)
T ss_pred             EEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEEEcCcc
Confidence            7999999999999999999 557888999887776654432     23899999999999987643   57999999997


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      .......+.+.+.|++++++|+.|+++++++++|.|+++++||++||..+..                            
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~----------------------------  133 (240)
T PRK06101         82 CEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL----------------------------  133 (240)
T ss_pred             cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc----------------------------
Confidence            5433444567889999999999999999999999998888999999988743                            


Q ss_pred             HHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                  +.++...|+++|+++++++++++.++...    |+++++|.||++.|++...
T Consensus       134 ------------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~----gi~v~~v~pg~i~t~~~~~  181 (240)
T PRK06101        134 ------------ALPRAEAYGASKAAVAYFARTLQLDLRPK----GIEVVTVFPGFVATPLTDK  181 (240)
T ss_pred             ------------CCCCCchhhHHHHHHHHHHHHHHHHHHhc----CceEEEEeCCcCCCCCcCC
Confidence                        34456899999999999999999999887    7889999999999998654

>PRK12742 oxidoreductase; Provisional

Probab=99.96  E-value=7.6e-28  Score=196.72  Aligned_cols=171  Identities=21%  Similarity=0.254  Sum_probs=141.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||+++++.|+++|+ .|+++.+ +.+..+....++    ..+|++|++++.+++++    ++++|++|||+|.
T Consensus        11 ItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~li~~ag~   85 (237)
T PRK12742         11 VLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK----SGALDILVVNAGI   85 (237)
T ss_pred             EECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHH----hCCCcEEEECCCC
Confidence            799999999999999999955 5655544 555555443332    23899999988877753    5789999999998


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      .......+.+.+.|++++++|+.+++.+++.+++.|++.++||++||..+..                            
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------------------------  137 (237)
T PRK12742         86 AVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------------------------  137 (237)
T ss_pred             CCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------------------------
Confidence            7666667788899999999999999999999999998889999999987622                            


Q ss_pred             HHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                 .+.++...|+.+|+++++++++++.++.+.    ||+||+|+||+++|++...
T Consensus       138 -----------~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~----gi~v~~v~Pg~~~t~~~~~  186 (237)
T PRK12742        138 -----------MPVAGMAAYAASKSALQGMARGLARDFGPR----GITINVVQPGPIDTDANPA  186 (237)
T ss_pred             -----------CCCCCCcchHHhHHHHHHHHHHHHHHHhhh----CeEEEEEecCcccCCcccc
Confidence                       133456899999999999999999999887    7999999999999998653

>PRK06484 short chain dehydrogenase; Validated

Probab=99.96  E-value=5.2e-28  Score=219.28  Aligned_cols=173  Identities=28%  Similarity=0.379  Sum_probs=152.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++++.|+++ +.+|++++|+.++++...+++      ..+|++++++++++++++.+.++++|+||||||
T Consensus        10 ITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag   88 (520)
T PRK06484         10 VTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAG   88 (520)
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            7999999999999999999 568888999988887766654      238999999999999999999999999999999


Q ss_pred             Ccc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--Cc-eEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          75 IAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HG-RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        75 ~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g-~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ...  ..++.+.+.++|++++++|+.+++.++++++|.|++  .+ +||++||..+..                      
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~----------------------  146 (520)
T PRK06484         89 VTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV----------------------  146 (520)
T ss_pred             cCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC----------------------
Confidence            842  345677888999999999999999999999999853  34 999999998844                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+++|+++.+|+++++.|+.+.    ||+|++|+||+++|++..
T Consensus       147 ------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~----~i~v~~i~Pg~v~t~~~~  193 (520)
T PRK06484        147 ------------------ALPKRTAYSASKAAVISLTRSLACEWAAK----GIRVNAVLPGYVRTQMVA  193 (520)
T ss_pred             ------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEccCCcCchhhh
Confidence                              34456899999999999999999999987    789999999999999864

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=2.3e-28  Score=189.50  Aligned_cols=151  Identities=30%  Similarity=0.446  Sum_probs=137.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC--cchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD--ASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~--~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++|+.+|++++|+  .+..+....++..         +|++++++++++++++.+.++++|++
T Consensus         5 ItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~l   84 (167)
T PF00106_consen    5 ITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDIL   84 (167)
T ss_dssp             EETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEE
T ss_pred             EECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            799999999999999999988899999999  5666666555542         89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||+|...+.++.+.+.+.|+++|++|+.+++++.++++|  ++.++||++||..+.                       
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~-----------------------  139 (167)
T PF00106_consen   85 INNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGV-----------------------  139 (167)
T ss_dssp             EEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGT-----------------------
T ss_pred             ccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhc-----------------------
Confidence            9999998888888889999999999999999999999999  778999999999984                       


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhh
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALL  193 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~  193 (230)
                                       .|.+++..|+++|+|+++|+++++.|+
T Consensus       140 -----------------~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  140 -----------------RGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             -----------------SSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------cCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence                             366677999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=7.1e-28  Score=198.62  Aligned_cols=174  Identities=19%  Similarity=0.295  Sum_probs=142.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCC-CcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGG-VDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~-id~lv~~a   73 (230)
                      ||||++|||+++++.|+++|+..++...+..+..+.....+      ..+|++++++++.+++++.+.+++ +|++|||+
T Consensus        10 ItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~a   89 (253)
T PRK08642         10 VTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNA   89 (253)
T ss_pred             EeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence            79999999999999999996544444455555555443332      238999999999999999998887 99999999


Q ss_pred             CCcc------ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          74 AIAF------KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        74 g~~~------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |...      ..++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..                  
T Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------------  151 (253)
T PRK08642         90 LADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN------------------  151 (253)
T ss_pred             CccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC------------------
Confidence            8742      234667788999999999999999999999998853  48999999976522                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                            +..+...|+++|++++++++++++++...    |++||+|+||+++|+...
T Consensus       152 ----------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~----~i~v~~i~pG~v~t~~~~  198 (253)
T PRK08642        152 ----------------------PVVPYHDYTTAKAALLGLTRNLAAELGPY----GITVNMVSGGLLRTTDAS  198 (253)
T ss_pred             ----------------------CCCCccchHHHHHHHHHHHHHHHHHhCcc----CeEEEEEeecccCCchhh
Confidence                                  33345799999999999999999999887    799999999999998643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.96  E-value=7.8e-28  Score=198.39  Aligned_cols=173  Identities=31%  Similarity=0.454  Sum_probs=146.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch--hHHHHHhhh----------cccCCC-HHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR--GQEALEKLQ----------KLDILD-KNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~--~~~~~~~~~----------~~D~s~-~~~v~~~~~~~~~~~~~id   67 (230)
                      ||||++|||+++|+.|+++ +..|++..+..+.  .+...+...          .+|+++ +++++.+++.+...+|++|
T Consensus        10 ITGas~GiG~aia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id   88 (251)
T COG1028          10 VTGASSGIGRAIARALARE-GARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRID   88 (251)
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999987 5566656555442  333333332          189998 9999999999999999999


Q ss_pred             EEEEccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          68 VLVNNAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        68 ~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ++|||||.... .++.+.+.+.|++++++|+.|++.+++.+.|.++++ +||++||..+. .                  
T Consensus        89 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~------------------  148 (251)
T COG1028          89 ILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-G------------------  148 (251)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-C------------------
Confidence            99999999876 478888899999999999999999999888888866 99999999884 2                  


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCC-CchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWP-NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                            .++ ...|++||+|+.+|++.++.++...    ||++++|+||+++|++.+..
T Consensus       149 ----------------------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~----gi~v~~v~PG~~~t~~~~~~  197 (251)
T COG1028         149 ----------------------GPPGQAAYAASKAALIGLTKALALELAPR----GIRVNAVAPGYIDTPMTAAL  197 (251)
T ss_pred             ----------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEEeccCCCcchhhh
Confidence                                  223 3899999999999999999998888    78899999999999997754

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.8e-28  Score=199.39  Aligned_cols=173  Identities=23%  Similarity=0.223  Sum_probs=150.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++| ..|++++|++.+++...+++.         .+|++|+++++.+++++.+.++++|++||
T Consensus        10 ItGa~~~IG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~   88 (258)
T PRK07890         10 VSGVGPGLGRTLAVRAARAG-ADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVN   88 (258)
T ss_pred             EECCCCcHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEE
Confidence            79999999999999999995 578888998877766655543         28999999999999999999999999999


Q ss_pred             ccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|...+ .++.+.+.++|++++++|+.|++.+++++++.|++ .++||++||..+..                      
T Consensus        89 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----------------------  146 (258)
T PRK07890         89 NAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH----------------------  146 (258)
T ss_pred             CCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc----------------------
Confidence            9998543 55667888999999999999999999999998864 47999999987733                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+++|++++.++++++.++...    ||++++|+||++.|++..
T Consensus       147 ------------------~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~----~i~v~~v~pg~v~~~~~~  193 (258)
T PRK07890        147 ------------------SQPKYGAYKMAKGALLAASQSLATELGPQ----GIRVNSVAPGYIWGDPLK  193 (258)
T ss_pred             ------------------CCCCcchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEeCCccCcHHHH
Confidence                              34456899999999999999999999887    788999999999998753

>KOG1208|consensus

Probab=99.96  E-value=3.6e-28  Score=205.79  Aligned_cols=183  Identities=32%  Similarity=0.431  Sum_probs=152.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      |||+++|||.++|+.|+.+| ..|++.+|+.++.+++.+++..           +|+++.++|+++++++...++++|++
T Consensus        40 VTGansGIG~eta~~La~~G-a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvL  118 (314)
T KOG1208|consen   40 VTGATSGIGFETARELALRG-AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVL  118 (314)
T ss_pred             EECCCCchHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEE
Confidence            79999999999999999995 8999999999988888887764           89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||+.....  ..+.|.++..|.+|++|+|.+++.++|.|++.  +|||++||..+ ........+    ..      
T Consensus       119 InNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l----~~------  185 (314)
T KOG1208|consen  119 INNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDL----SG------  185 (314)
T ss_pred             EeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhc----cc------
Confidence            99999975433  67778999999999999999999999999865  79999999887 211111110    00      


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC-CCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD-MSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~-~~~  218 (230)
                                      ...+.......|+.||.++..+++.|++.+..     ||.+++++||.+.|. +.+
T Consensus       186 ----------------~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-----~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  186 ----------------EKAKLYSSDAAYALSKLANVLLANELAKRLKK-----GVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             ----------------hhccCccchhHHHHhHHHHHHHHHHHHHHhhc-----CceEEEECCCcccccceec
Confidence                            00111223357999999999999999999988     588999999999999 555

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.3e-28  Score=199.13  Aligned_cols=174  Identities=24%  Similarity=0.239  Sum_probs=152.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-------cccCCCHHHHHHHHHHHHhh-cCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIKALHDHLEAE-HGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-------~~D~s~~~~v~~~~~~~~~~-~~~id~lv~~   72 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.+++....+.       .+|+++.++++++++++.+. ++++|+||||
T Consensus         6 ItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~   84 (260)
T PRK08267          6 ITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNN   84 (260)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEC
Confidence            7999999999999999999 5688888999888777655443       38999999999999998776 7899999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||......+.+.+.+.+++++++|+.+++.+++++.++|+.  .++||++||..+..                       
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------------------  141 (260)
T PRK08267         85 AGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIY-----------------------  141 (260)
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCc-----------------------
Confidence            99987777778888999999999999999999999998864  48999999988744                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       +..+...|+.||+++++++++++.++...    ||++++|.||+++|++.+.
T Consensus       142 -----------------~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~----~i~v~~i~pg~~~t~~~~~  189 (260)
T PRK08267        142 -----------------GQPGLAVYSATKFAVRGLTEALDLEWRRH----GIRVADVMPLFVDTAMLDG  189 (260)
T ss_pred             -----------------CCCCchhhHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCCcCCccccc
Confidence                             34455899999999999999999999876    7889999999999998664

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.2e-28  Score=201.15  Aligned_cols=172  Identities=27%  Similarity=0.354  Sum_probs=146.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHH-HHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQE-ALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~-~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||||++|||+++++.|+++ +..|++++|+.+.... ..-.+..+|++++++++++++++.+.++++|+||||+|.....
T Consensus        11 ItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   89 (252)
T PRK07856         11 VTGGTRGIGAGIARAFLAA-GATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYA   89 (252)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            7999999999999999999 5578888887654110 0011234899999999999999999999999999999987666


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      .+.+.+.+.|++++++|+.+++.+++++.+.|++   .++||++||..+..                             
T Consensus        90 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------------------------  140 (252)
T PRK07856         90 LAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR-----------------------------  140 (252)
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC-----------------------------
Confidence            6777888999999999999999999999998864   37999999988743                             


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                 +.++...|+++|+++++|+++++.++.+.     |++|+|+||+++|++..
T Consensus       141 -----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-----i~v~~i~Pg~v~t~~~~  186 (252)
T PRK07856        141 -----------PSPGTAAYGAAKAGLLNLTRSLAVEWAPK-----VRVNAVVVGLVRTEQSE  186 (252)
T ss_pred             -----------CCCCCchhHHHHHHHHHHHHHHHHHhcCC-----eEEEEEEeccccChHHh
Confidence                       34456899999999999999999999875     78999999999999854

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.1e-28  Score=205.61  Aligned_cols=187  Identities=25%  Similarity=0.364  Sum_probs=147.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|+.++.++..+.+.           .+|++|.++++++++++.+.++++|+|
T Consensus        21 ItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   99 (306)
T PRK06197         21 VTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLL   99 (306)
T ss_pred             EcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEE
Confidence            7999999999999999999 4588889998877665443332           389999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccc-cccchHHHHHHhhhhchhH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHL-CHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~-~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||||...+.  ...+.+.++..|++|+.|++.+++.++|.|++  .++||++||.++.. .....+             
T Consensus       100 i~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~-------------  164 (306)
T PRK06197        100 INNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFD-------------  164 (306)
T ss_pred             EECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcc-------------
Confidence            9999986432  34566889999999999999999999999875  37999999987632 110000             


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                     +.....+..+...|+.||++++.+++.++.++...+++  +.+++++||+|+|+|.++.
T Consensus       165 ---------------~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~--v~~v~~~PG~v~T~~~~~~  221 (306)
T PRK06197        165 ---------------DLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGAT--TIAVAAHPGVSNTELARNL  221 (306)
T ss_pred             ---------------ccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCC--eEEEEeCCCcccCcccccC
Confidence                           00011123345799999999999999999999887444  5556668999999997754

>PRK07069 short chain dehydrogenase; Validated

Probab=99.96  E-value=9e-28  Score=197.76  Aligned_cols=175  Identities=25%  Similarity=0.328  Sum_probs=150.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhh-----------hcccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKL-----------QKLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~-----------~~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||+++++.|+++ +..|++++|+ .+.++...+.+           ..+|++|+++++++++++.+.++++|+
T Consensus         4 VtG~~~~iG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (251)
T PRK07069          4 ITGAAGGLGRAIARRMAEQ-GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSV   82 (251)
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccE
Confidence            7999999999999999999 4578888887 55555544433           237999999999999999999999999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      +|||+|.....++.+.+.+++++++++|+.+++.+++.++|.|++.  ++||++||..+..                   
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~-------------------  143 (251)
T PRK07069         83 LVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFK-------------------  143 (251)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhcc-------------------
Confidence            9999998777777788889999999999999999999999999753  7999999988844                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           +.++...|+++|++++.++++++.++...+.  ++++++|+||+++|++..
T Consensus       144 ---------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~--~i~v~~v~pg~v~t~~~~  192 (251)
T PRK07069        144 ---------------------AEPDYTAYNASKAAVASLTKSIALDCARRGL--DVRCNSIHPTFIRTGIVD  192 (251)
T ss_pred             ---------------------CCCCCchhHHHHHHHHHHHHHHHHHhcccCC--cEEEEEEeecccCCcchh
Confidence                                 3345589999999999999999999987643  389999999999999864

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.5e-28  Score=199.66  Aligned_cols=172  Identities=23%  Similarity=0.310  Sum_probs=150.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.++++.|+++| ..|++++|+.+++++..+.+.         .+|+++++++.++++++.+.++++|+|||
T Consensus        15 ItGasggIG~~~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   93 (263)
T PRK07814         15 VTGAGRGLGAAIALAFAEAG-ADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVN   93 (263)
T ss_pred             EECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79999999999999999995 588889998877766655442         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||......+.+.+.+.+++++++|+.+++.+++++.+.|.+   .++||++||..+..                     
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~---------------------  152 (263)
T PRK07814         94 NVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL---------------------  152 (263)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC---------------------
Confidence            999876667778889999999999999999999999998854   48999999988843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +..+...|+++|++++.++++++.++.+     ++++|+|+||++.|++..
T Consensus       153 -------------------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-----~i~v~~i~Pg~v~t~~~~  198 (263)
T PRK07814        153 -------------------AGRGFAAYGTAKAALAHYTRLAALDLCP-----RIRVNAIAPGSILTSALE  198 (263)
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHHCC-----CceEEEEEeCCCcCchhh
Confidence                               3445689999999999999999999865     388999999999998754

>TIGR02415 23BDH acetoin reductases

Probab=99.96  E-value=9.7e-28  Score=198.05  Aligned_cols=174  Identities=28%  Similarity=0.360  Sum_probs=151.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||.+++++|+++ +..|++++|+.+.++...+.+.         .+|++|++++.++++++.+.++++|+|||
T Consensus         5 ItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   83 (254)
T TIGR02415         5 VTGGAQGIGKGIAERLAKD-GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVN   83 (254)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5578888888776665544432         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |+|.....++.+.+.+.|++++++|+.+++++++.+++.|++   .++||++||..+..                     
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~---------------------  142 (254)
T TIGR02415        84 NAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE---------------------  142 (254)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC---------------------
Confidence            999977677788899999999999999999999999998854   37999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|+.+|+++++++++++.++.+.    |++|++|+||+++|++...
T Consensus       143 -------------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~Pg~i~t~~~~~  190 (254)
T TIGR02415       143 -------------------GNPILSAYSSTKFAVRGLTQTAAQELAPK----GITVNAYCPGIVKTPMWEE  190 (254)
T ss_pred             -------------------CCCCCcchHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCcccChhhhh
Confidence                               44456899999999999999999999876    7889999999999998653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.8e-28  Score=196.77  Aligned_cols=173  Identities=23%  Similarity=0.250  Sum_probs=151.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.+++++|+++| ..|++++|++++.+...+.+.         .+|+++++++.++++++.+.++++|+|||
T Consensus        11 ItG~sg~iG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   89 (241)
T PRK07454         11 ITGASSGIGKATALAFAKAG-WDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLIN   89 (241)
T ss_pred             EeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79999999999999999995 588889998877666544332         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|.....++.+.+.+.+++++++|+.+++.+++.+++.|++  .++||++||..+..                      
T Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------------  147 (241)
T PRK07454         90 NAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN----------------------  147 (241)
T ss_pred             CCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc----------------------
Confidence            999877666777888999999999999999999999998864  37999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +..+...|+.+|++++.++++++.++...    |+++++|.||+++|++..
T Consensus       148 ------------------~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~----gi~v~~i~pg~i~t~~~~  194 (241)
T PRK07454        148 ------------------AFPQWGAYCVSKAALAAFTKCLAEEERSH----GIRVCTITLGAVNTPLWD  194 (241)
T ss_pred             ------------------CCCCccHHHHHHHHHHHHHHHHHHHhhhh----CCEEEEEecCcccCCccc
Confidence                              34456899999999999999999999887    788999999999999854

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-27  Score=199.21  Aligned_cols=171  Identities=22%  Similarity=0.331  Sum_probs=148.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.+++++|+++ ++.|++++|+++.++...+.+.         .+|++++++++++++++.+.++++|++||
T Consensus        14 ItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~   92 (264)
T PRK07576         14 VVGGTSGINLGIAQAFARA-GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVS   92 (264)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5578888998877665544332         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+|......+.+.+.+.|++++++|+.|++.++++++|.|+ ++++||++||..+..                       
T Consensus        93 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~-----------------------  149 (264)
T PRK07576         93 GAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV-----------------------  149 (264)
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc-----------------------
Confidence            99976666677888899999999999999999999999886 458999999987743                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc-cCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN-TDM  216 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~-t~~  216 (230)
                                       +.++...|+++|+++++|+++++.++...    |++|++|+||+++ |+.
T Consensus       150 -----------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~----gi~v~~v~pg~~~~t~~  195 (264)
T PRK07576        150 -----------------PMPMQAHVCAAKAGVDMLTRTLALEWGPE----GIRVNSIVPGPIAGTEG  195 (264)
T ss_pred             -----------------CCCCccHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecccccCcHH
Confidence                             33456899999999999999999999876    7999999999996 553

>KOG1610|consensus

Probab=99.96  E-value=1.1e-27  Score=197.77  Aligned_cols=173  Identities=25%  Similarity=0.339  Sum_probs=151.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-------cccCCCHHHHHHHHHHHHhhcC--CCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIKALHDHLEAEHG--GVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-------~~D~s~~~~v~~~~~~~~~~~~--~id~lv~   71 (230)
                      |||+.+|+|+.+|++|.++ +..|+..+.+++..+....+..       ..|++++++++++++.+.+..+  .+-.|||
T Consensus        34 ITGCDSGfG~~LA~~L~~~-Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVN  112 (322)
T KOG1610|consen   34 ITGCDSGFGRLLAKKLDKK-GFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVN  112 (322)
T ss_pred             EecCCcHHHHHHHHHHHhc-CCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEe
Confidence            8999999999999999999 7788888877776666655442       2899999999999999888765  6999999


Q ss_pred             ccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||+. ..++.+-.+.+++.+++++|++|++.++++++|++|+ +||||++||+.|..                      
T Consensus       113 NAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~----------------------  170 (322)
T KOG1610|consen  113 NAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRV----------------------  170 (322)
T ss_pred             ccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCc----------------------
Confidence            99976 4466666788999999999999999999999999985 59999999999954                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.+...+|++||+|++.|+.++++|+.+.    ||+|..|.||..+|++..
T Consensus       171 ------------------~~p~~g~Y~~SK~aVeaf~D~lR~EL~~f----GV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  171 ------------------ALPALGPYCVSKFAVEAFSDSLRRELRPF----GVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ------------------cCcccccchhhHHHHHHHHHHHHHHHHhc----CcEEEEeccCccccccCC
Confidence                              44455999999999999999999999999    888999999999999876

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.96  E-value=1.1e-27  Score=197.11  Aligned_cols=175  Identities=24%  Similarity=0.399  Sum_probs=147.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.+++++|+++|+..+++..++++..++..+.+.         .+|+++++++.++++++.+.++++|+|||
T Consensus        11 ItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   90 (247)
T PRK12935         11 VTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVN   90 (247)
T ss_pred             EECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            799999999999999999965444444455555555544332         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|...+..+.+.+.+.+++++++|+.+++.++++++|.|.+  .++||++||..+..                      
T Consensus        91 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------------  148 (247)
T PRK12935         91 NAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA----------------------  148 (247)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC----------------------
Confidence            999976666677788999999999999999999999998853  47999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +..+...|+++|+++++++++++.++.+.    |++++.|+||+++|++...
T Consensus       149 ------------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~v~t~~~~~  196 (247)
T PRK12935        149 ------------------GGFGQTNYSAAKAGMLGFTKSLALELAKT----NVTVNAICPGFIDTEMVAE  196 (247)
T ss_pred             ------------------CCCCCcchHHHHHHHHHHHHHHHHHHHHc----CcEEEEEEeCCCcChhhhh
Confidence                              33456899999999999999999999776    7889999999999987554

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.96  E-value=1.6e-27  Score=197.43  Aligned_cols=173  Identities=21%  Similarity=0.279  Sum_probs=148.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-----------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-----------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+++||.+++++|+++ +..|++++|+...++...+.+           ..+|++++++++.+++++.+.++++|++
T Consensus         7 ItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   85 (259)
T PRK12384          7 VIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLL   85 (259)
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7999999999999999999 568888898877665554332           1289999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||+|......+.+.+.+.|++++++|+.|++++++++++.|++   .++||++||..+..                   
T Consensus        86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~-------------------  146 (259)
T PRK12384         86 VYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV-------------------  146 (259)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc-------------------
Confidence            99999887777788889999999999999999999999998853   36999999987633                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc-ccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV-NTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v-~t~~~~  218 (230)
                                           +......|++||+++++++++++.++.+.    ||+||+|.||++ .|++..
T Consensus       147 ---------------------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~----gi~v~~v~pg~~~~~~~~~  194 (259)
T PRK12384        147 ---------------------GSKHNSGYSAAKFGGVGLTQSLALDLAEY----GITVHSLMLGNLLKSPMFQ  194 (259)
T ss_pred             ---------------------CCCCCchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEecCCcccchhhh
Confidence                                 33445799999999999999999999887    789999999974 777654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=194.82  Aligned_cols=184  Identities=26%  Similarity=0.384  Sum_probs=150.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH----hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~----~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||.+++++|+++ +..|++++|++.+.+...+    ....+|++|+++++.+++++.+  +++|+||||+|..
T Consensus         6 ItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~   82 (225)
T PRK08177          6 IIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGIS   82 (225)
T ss_pred             EeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCccc
Confidence            7999999999999999999 5688899998876654322    1223899999999999998854  4899999999986


Q ss_pred             cc--cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          77 FK--VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        77 ~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      .+  .++.+.+.+++++++++|+.+++.+++++++.+++. ++++++||..+...                         
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~-------------------------  137 (225)
T PRK08177         83 GPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVE-------------------------  137 (225)
T ss_pred             CCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccc-------------------------
Confidence            43  345667889999999999999999999999998765 89999999776431                         


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCCCCcccc
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQD  228 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~  228 (230)
                                  ..+..+...|+++|++++.++++++.++...    ||+||+|+||+++|++.....+.++++.
T Consensus       138 ------------~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~----~i~v~~i~PG~i~t~~~~~~~~~~~~~~  196 (225)
T PRK08177        138 ------------LPDGGEMPLYKASKAALNSMTRSFVAELGEP----TLTVLSMHPGWVKTDMGGDNAPLDVETS  196 (225)
T ss_pred             ------------cCCCCCccchHHHHHHHHHHHHHHHHHhhcC----CeEEEEEcCCceecCCCCCCCCCCHHHH
Confidence                        1122345789999999999999999999876    7999999999999999877666666543

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-27  Score=197.59  Aligned_cols=175  Identities=28%  Similarity=0.383  Sum_probs=149.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhc------CC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEH------GG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~------~~   65 (230)
                      ||||+||||.+++++|+++|...+++..|+.++++...+.+.         .+|++|++++.++++++.+.+      ++
T Consensus        11 ItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~   90 (254)
T PRK12746         11 VTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSE   90 (254)
T ss_pred             EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCC
Confidence            799999999999999999955444445787776655544432         289999999999999998877      47


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      +|++|||+|...+..+.+.+.+.|++++++|+.+++.+++.+++.|++.+++|++||..+..                  
T Consensus        91 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~------------------  152 (254)
T PRK12746         91 IDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL------------------  152 (254)
T ss_pred             ccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC------------------
Confidence            99999999987777777888899999999999999999999999998778999999987743                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                            +.++...|+.+|++++.++++++.++.+.    |+++++++||++.|++...
T Consensus       153 ----------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~----~i~v~~v~pg~~~t~~~~~  200 (254)
T PRK12746        153 ----------------------GFTGSIAYGLSKGALNTMTLPLAKHLGER----GITVNTIMPGYTKTDINAK  200 (254)
T ss_pred             ----------------------CCCCCcchHhhHHHHHHHHHHHHHHHhhc----CcEEEEEEECCccCcchhh
Confidence                                  33456889999999999999999999876    7889999999999998654

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-27  Score=198.06  Aligned_cols=171  Identities=28%  Similarity=0.326  Sum_probs=144.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++| ..|++.+|+++.. ...+.+.         .+|++++++++.+++++.+.++++|+|||
T Consensus        12 ItGasggiG~~la~~l~~~G-~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   89 (258)
T PRK08628         12 VTGGASGIGAAISLRLAEEG-AIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVN   89 (258)
T ss_pred             EeCCCChHHHHHHHHHHHcC-CcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999995 4677778877655 3333332         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+|......+...+ +.|++.+++|+.+++.+++.++|.|++ .++||++||..+..                       
T Consensus        90 ~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------------------  145 (258)
T PRK08628         90 NAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT-----------------------  145 (258)
T ss_pred             CCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc-----------------------
Confidence            99975544444444 899999999999999999999998864 58999999988743                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                       +..+...|+.||+++++++++++.++...    ||++|+|+||+++|++..
T Consensus       146 -----------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~----~i~v~~v~pg~v~t~~~~  192 (258)
T PRK08628        146 -----------------GQGGTSGYAAAKGAQLALTREWAVALAKD----GVRVNAVIPAEVMTPLYE  192 (258)
T ss_pred             -----------------CCCCCchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCccCCHHHH
Confidence                             33455899999999999999999999876    799999999999999753

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.3e-27  Score=200.32  Aligned_cols=174  Identities=24%  Similarity=0.311  Sum_probs=148.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||.+++++|+++ +..|++++|+.. ..+.....+         ..+|++++++++++++++.+.++++|+||
T Consensus        51 ItGasggIG~~la~~l~~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI  129 (290)
T PRK06701         51 ITGGDSGIGRAVAVLFAKE-GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILV  129 (290)
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 557778887653 333333332         23899999999999999999999999999


Q ss_pred             EccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          71 NNAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        71 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||||.... ..+.+.+.+.|.+++++|+.+++.+++++++.|++.++||++||..++.                      
T Consensus       130 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~----------------------  187 (290)
T PRK06701        130 NNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYE----------------------  187 (290)
T ss_pred             ECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccC----------------------
Confidence            99998643 4567788899999999999999999999999998789999999988743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.+....|+++|++++.++++++.++...    ||+|++|.||+++|++...
T Consensus       188 ------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~----gIrv~~i~pG~v~T~~~~~  235 (290)
T PRK06701        188 ------------------GNETLIDYSATKGAIHAFTRSLAQSLVQK----GIRVNAVAPGPIWTPLIPS  235 (290)
T ss_pred             ------------------CCCCcchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCCCCCccccc
Confidence                              23344789999999999999999999886    7999999999999998653

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=198.85  Aligned_cols=174  Identities=26%  Similarity=0.350  Sum_probs=147.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.. ..+..+.+         ..+|++++++++++++++.+.++++|+|||
T Consensus        11 ItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~   88 (263)
T PRK08226         11 ITGALQGIGEGIARVFARH-GANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVN   88 (263)
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 457888888764 22222222         238999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|.....++.+.+.+.+++++++|+.+++.+++.+++.|++  .++||++||..+...                     
T Consensus        89 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------  147 (263)
T PRK08226         89 NAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV---------------------  147 (263)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc---------------------
Confidence            999977777788888999999999999999999999998753  479999999766221                     


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|+++|+++++++++++.++...    |++||+|+||+++|++.+.
T Consensus       148 ------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~----~i~v~~i~pg~v~t~~~~~  195 (263)
T PRK08226        148 ------------------ADPGETAYALTKAAIVGLTKSLAVEYAQS----GIRVNAICPGYVRTPMAES  195 (263)
T ss_pred             ------------------CCCCcchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCcccCHHHHh
Confidence                              22345789999999999999999999876    7889999999999998653

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1e-27  Score=198.49  Aligned_cols=176  Identities=23%  Similarity=0.317  Sum_probs=149.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||.+++++|+++ +..|++++|+..+++...+.+    ..+|++++++++++++++.+.++++|++|||+|..
T Consensus        12 ItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   90 (255)
T PRK06057         12 ITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGIS   90 (255)
T ss_pred             EECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            7999999999999999999 567888889887766655443    34899999999999999999999999999999986


Q ss_pred             cc--cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          77 FK--VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        77 ~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .+  .++.+.+.+.|++++++|+.+++.+++.++|+|++  .++||++||..+...+                       
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-----------------------  147 (255)
T PRK06057         91 PPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-----------------------  147 (255)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-----------------------
Confidence            43  34556788999999999999999999999998853  4799999997763311                       


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                      ..+...|+.+|+++.+++++++.++...    |++|++|+||+++|++....
T Consensus       148 ----------------~~~~~~Y~~sKaal~~~~~~l~~~~~~~----gi~v~~i~pg~v~t~~~~~~  195 (255)
T PRK06057        148 ----------------ATSQISYTASKGGVLAMSRELGVQFARQ----GIRVNALCPGPVNTPLLQEL  195 (255)
T ss_pred             ----------------CCCCcchHHHHHHHHHHHHHHHHHHHhh----CcEEEEEeeCCcCCchhhhh
Confidence                            1234789999999999999999999887    78899999999999986543

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.8e-27  Score=195.68  Aligned_cols=174  Identities=26%  Similarity=0.340  Sum_probs=150.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++ +..|++++|++++++.....+.         .+|++++++++++++++.+.++++|++||
T Consensus        14 ItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~   92 (258)
T PRK06949         14 VTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVN   92 (258)
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 4578899999888776655432         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----------CceEEEecCCCccccccchHHHHHHhhh
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----------HGRVVNVSSSCGHLCHVTSEALKKKLLH  141 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----------~g~ii~~sS~~~~~~~~~~~~~~~~~~~  141 (230)
                      |+|.....++.+.+.+.|+.++++|+.+++.+++++++.|+.          .++||++||..+..              
T Consensus        93 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------------  158 (258)
T PRK06949         93 NSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR--------------  158 (258)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC--------------
Confidence            999876666777788999999999999999999999987742          36999999987743              


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         142 EIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                                +.++..+|+++|++++.++++++.++.+.    |++|++|+||+++|++...
T Consensus       159 --------------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~----~i~v~~v~pG~v~t~~~~~  206 (258)
T PRK06949        159 --------------------------VLPQIGLYCMSKAAVVHMTRAMALEWGRH----GINVNAICPGYIDTEINHH  206 (258)
T ss_pred             --------------------------CCCCccHHHHHHHHHHHHHHHHHHHHHhc----CeEEEEEeeCCCcCCcchh
Confidence                                      33445899999999999999999999886    7899999999999998653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.95  E-value=3.2e-27  Score=193.73  Aligned_cols=174  Identities=28%  Similarity=0.364  Sum_probs=150.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++++.|+++| ..|++.+|+.++++.....+      ..+|+++.++++++++++.+.++++|+||||+|
T Consensus        11 ItGa~g~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   89 (245)
T PRK12936         11 VTGASGGIGEEIARLLHAQG-AIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAG   89 (245)
T ss_pred             EECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            79999999999999999995 57888888887776654432      238999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ...+.++.+.+.+.|++++++|+.+++.+++++.+.+.  +.++||++||..+..                         
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------------------------  144 (245)
T PRK12936         90 ITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT-------------------------  144 (245)
T ss_pred             CCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc-------------------------
Confidence            97766677788899999999999999999999998763  347999999987743                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     +.++...|+.+|+++.++++.++.++...    |+++++|+||+++|++...
T Consensus       145 ---------------~~~~~~~Y~~sk~a~~~~~~~la~~~~~~----~i~v~~i~pg~~~t~~~~~  192 (245)
T PRK12936        145 ---------------GNPGQANYCASKAGMIGFSKSLAQEIATR----NVTVNCVAPGFIESAMTGK  192 (245)
T ss_pred             ---------------CCCCCcchHHHHHHHHHHHHHHHHHhhHh----CeEEEEEEECcCcCchhcc
Confidence                           33455899999999999999999998876    7899999999999998654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.1e-27  Score=196.97  Aligned_cols=174  Identities=28%  Similarity=0.373  Sum_probs=150.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||+||||++++++|+++ +..|++..|+++.++...+..      ..+|++|.++++++++++.+.++++|+||||+|
T Consensus         7 VtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   85 (276)
T PRK06482          7 ITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAG   85 (276)
T ss_pred             EecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 557888889887666554432      239999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ........+.+.+.+++.+++|+.+++.++++++|+|++.  ++||++||..+..                         
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------------------------  140 (276)
T PRK06482         86 YGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI-------------------------  140 (276)
T ss_pred             CCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc-------------------------
Confidence            9877777778889999999999999999999999988643  7999999987632                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     +.++...|+.||++++.++++++.++.+.    |++++.+.||.+.|++...
T Consensus       141 ---------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~----gi~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        141 ---------------AYPGFSLYHATKWGIEGFVEAVAQEVAPF----GIEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHhhcc----CcEEEEEeCCccccCCccc
Confidence                           33456899999999999999999999876    7889999999999998654

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.1e-27  Score=193.63  Aligned_cols=174  Identities=27%  Similarity=0.331  Sum_probs=152.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.++++.|+++ +..|++++|++++++...+.++         .+|++|+++++++++++.+.++++|+|||
T Consensus        12 ItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   90 (250)
T PRK12939         12 VTGAARGLGAAFAEALAEA-GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVN   90 (250)
T ss_pred             EeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 4577778888887766655442         27999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|...+..+.+.+.+.+++++++|+.+++.+++.+.+.|.+  .+++|++||..+..                      
T Consensus        91 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  148 (250)
T PRK12939         91 NAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW----------------------  148 (250)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc----------------------
Confidence            999987777778888999999999999999999999998865  57999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +..+...|+.+|++++++++.++.++...    ++++++|.||+++|++.+.
T Consensus       149 ------------------~~~~~~~y~~sK~~~~~~~~~l~~~~~~~----~i~v~~v~pg~v~t~~~~~  196 (250)
T PRK12939        149 ------------------GAPKLGAYVASKGAVIGMTRSLARELGGR----GITVNAIAPGLTATEATAY  196 (250)
T ss_pred             ------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhh----CEEEEEEEECCCCCccccc
Confidence                              33345789999999999999999999876    7889999999999998754

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.3e-27  Score=194.49  Aligned_cols=174  Identities=26%  Similarity=0.341  Sum_probs=152.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh--------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL--------QKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~--------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+++||.+++++|+++ ++.|++++|+.+..+...+.+        ..+|++|+++++++++++.+.++++|+||||
T Consensus        10 ItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~   88 (252)
T PRK06138         10 VTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNN   88 (252)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            7999999999999999999 567888899887776655543        2389999999999999999999999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      +|...+..+.+.+.+.+++++++|+.+++.+++.+++.|++.  ++||++||..+..                       
T Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~-----------------------  145 (252)
T PRK06138         89 AGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA-----------------------  145 (252)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc-----------------------
Confidence            998777777788899999999999999999999999988643  7999999987743                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       +.++...|+.+|++++.++++++.++...    |++++++.||++.|++...
T Consensus       146 -----------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~  193 (252)
T PRK06138        146 -----------------GGRGRAAYVASKGAIASLTRAMALDHATD----GIRVNAVAPGTIDTPYFRR  193 (252)
T ss_pred             -----------------CCCCccHHHHHHHHHHHHHHHHHHHHHhc----CeEEEEEEECCccCcchhh
Confidence                             34456899999999999999999999876    7889999999999998653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.95  E-value=2.9e-27  Score=194.70  Aligned_cols=174  Identities=26%  Similarity=0.311  Sum_probs=144.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.++++.|+++|...+++..|+++.++.....+.         .+|++++++++.+++++.+.++++|++||
T Consensus         7 ItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   86 (248)
T PRK06947          7 ITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVN   86 (248)
T ss_pred             EeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            799999999999999999965444445566666655544432         28999999999999999998999999999


Q ss_pred             ccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          72 NAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        72 ~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |+|...+ .++.+.+.+.++.++++|+.+++.+++.+++.|..     .++||++||.++..                  
T Consensus        87 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~------------------  148 (248)
T PRK06947         87 NAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL------------------  148 (248)
T ss_pred             CCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC------------------
Confidence            9998643 44667788999999999999999999999988743     36899999988743                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCC-CCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGW-PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                            +.+ ++..|+++|+++++++++++.++.+.    |++|+.|.||+++|++..
T Consensus       149 ----------------------~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~----~i~v~~i~Pg~v~t~~~~  196 (248)
T PRK06947        149 ----------------------GSPNEYVDYAGSKGAVDTLTLGLAKELGPH----GVRVNAVRPGLIETEIHA  196 (248)
T ss_pred             ----------------------CCCCCCcccHhhHHHHHHHHHHHHHHhhhh----CcEEEEEeccCccccccc
Confidence                                  222 23679999999999999999999876    788999999999999854

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=5.8e-27  Score=194.05  Aligned_cols=173  Identities=23%  Similarity=0.232  Sum_probs=144.1

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCc-----------chhHHHHHhh---------hcccCCCHHHHHHHHHH
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDA-----------SRGQEALEKL---------QKLDILDKNSIKALHDH   58 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~-----------~~~~~~~~~~---------~~~D~s~~~~v~~~~~~   58 (230)
                      ||||++  |||.+++++|+++| ..|++.+|++           .........+         ..+|++++++++.++++
T Consensus        10 ItGas~~~giG~~la~~l~~~G-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   88 (256)
T PRK12748         10 VTGASRLNGIGAAVCRRLAAKG-IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYA   88 (256)
T ss_pred             EeCCCCCCCHHHHHHHHHHHcC-CcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            799994  99999999999995 4777777761           1111121221         13899999999999999


Q ss_pred             HHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHH
Q psy7994          59 LEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALK  136 (230)
Q Consensus        59 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~  136 (230)
                      +.+.++++|+||||+|.....++.+.+.+.+++.+++|+.+++.+++++++.|.+  .++||++||..+..         
T Consensus        89 ~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~---------  159 (256)
T PRK12748         89 VSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG---------  159 (256)
T ss_pred             HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC---------
Confidence            9999999999999999876667777888999999999999999999999998864  47999999987743         


Q ss_pred             HHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         137 KKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                                     +.++...|+++|+++++++++++.++...    |++|++|+||+++|++
T Consensus       160 -------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~i~Pg~~~t~~  204 (256)
T PRK12748        160 -------------------------------PMPDELAYAATKGAIEAFTKSLAPELAEK----GITVNAVNPGPTDTGW  204 (256)
T ss_pred             -------------------------------CCCCchHHHHHHHHHHHHHHHHHHHHHHh----CeEEEEEEeCcccCCC
Confidence                                           33345789999999999999999999876    7899999999999997


Q ss_pred             CC
Q psy7994         217 SS  218 (230)
Q Consensus       217 ~~  218 (230)
                      ..
T Consensus       205 ~~  206 (256)
T PRK12748        205 IT  206 (256)
T ss_pred             CC
Confidence            54

>KOG4169|consensus

Probab=99.95  E-value=1.9e-28  Score=193.19  Aligned_cols=167  Identities=28%  Similarity=0.400  Sum_probs=140.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      +|||.||||+++++.|+++|..++++..+.+. .+. ..+++           +||+++..++++.++++...||.||++
T Consensus        10 vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIl   87 (261)
T KOG4169|consen   10 VTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDIL   87 (261)
T ss_pred             EecCCchhhHHHHHHHHHcCchheeehhhhhC-HHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEE
Confidence            58999999999999999997777776666554 222 22222           299999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      ||+||+.        +..+|++++.+|+.|.+.-+...+|+|.+     +|-|||+||..|..                 
T Consensus        88 INgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~-----------------  142 (261)
T KOG4169|consen   88 INGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD-----------------  142 (261)
T ss_pred             Ecccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC-----------------
Confidence            9999995        45779999999999999999999999953     36999999999954                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                             |.+-.+.|++||+++..||||+|......  +.|+++++++||+++|.+...
T Consensus       143 -----------------------P~p~~pVY~AsKaGVvgFTRSla~~ayy~--~sGV~~~avCPG~t~t~l~~~  192 (261)
T KOG4169|consen  143 -----------------------PMPVFPVYAASKAGVVGFTRSLADLAYYQ--RSGVRFNAVCPGFTRTDLAEN  192 (261)
T ss_pred             -----------------------ccccchhhhhcccceeeeehhhhhhhhHh--hcCEEEEEECCCcchHHHHHH
Confidence                                   33445899999999999999999875543  237999999999999997654

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.2e-27  Score=195.62  Aligned_cols=172  Identities=26%  Similarity=0.342  Sum_probs=150.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh--------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL--------QKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~--------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||.+++++|+++ +..|++++|+.++++....++        ..+|++|+++++.+++.+.+ ++++|++|||
T Consensus        10 ItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~   87 (263)
T PRK09072         10 LTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGGINVLINN   87 (263)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEEC
Confidence            7999999999999999999 467888999888777665543        23899999999999999876 7899999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      +|.....++.+.+.+.+++++++|+.|++.+++.++++|+++  ++||++||..+..                       
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------------------  144 (263)
T PRK09072         88 AGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI-----------------------  144 (263)
T ss_pred             CCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc-----------------------
Confidence            998766677788889999999999999999999999988654  8999999987743                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                       +.++...|+.+|+++.+++++++.++...    |++|++|+||+++|++..
T Consensus       145 -----------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~Pg~~~t~~~~  191 (263)
T PRK09072        145 -----------------GYPGYASYCASKFALRGFSEALRRELADT----GVRVLYLAPRATRTAMNS  191 (263)
T ss_pred             -----------------CCCCccHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCcccccchh
Confidence                             33455889999999999999999999876    788999999999999854

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.1e-27  Score=191.91  Aligned_cols=175  Identities=20%  Similarity=0.293  Sum_probs=147.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCC--HHHHHHHHHHHHhhc-CCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILD--KNSIKALHDHLEAEH-GGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~--~~~v~~~~~~~~~~~-~~id   67 (230)
                      ||||++|||.++++.|+++ +..|++++|++++++...+++.          .+|+++  .+++.++++++.+.+ +++|
T Consensus        11 ItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id   89 (239)
T PRK08703         11 VTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLD   89 (239)
T ss_pred             EECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999 5578889999887776655542          278875  568899999999888 7999


Q ss_pred             EEEEccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          68 VLVNNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        68 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      ++|||||... ..++.+.+.+.|++++++|+.|++.++++++|.|++  .++||+++|..+..                 
T Consensus        90 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----------------  152 (239)
T PRK08703         90 GIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET-----------------  152 (239)
T ss_pred             EEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----------------
Confidence            9999999753 356677888999999999999999999999998864  47999999987733                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                             +.++...|++||++++.++++++.++...   .+++|++|.||+++|++...
T Consensus       153 -----------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~---~~i~v~~v~pG~v~t~~~~~  201 (239)
T PRK08703        153 -----------------------PKAYWGGFGASKAALNYLCKVAADEWERF---GNLRANVLVPGPINSPQRIK  201 (239)
T ss_pred             -----------------------CCCCccchHHhHHHHHHHHHHHHHHhccC---CCeEEEEEecCcccCccccc
Confidence                                   33445789999999999999999999765   25899999999999998654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=6e-27  Score=191.87  Aligned_cols=174  Identities=26%  Similarity=0.366  Sum_probs=151.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++| ..|++++|++.+.++...++.         .+|++++++++.+++++.+.++++|+|||
T Consensus        12 VtG~sg~iG~~l~~~L~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   90 (239)
T PRK07666         12 ITGAGRGIGRAVAIALAKEG-VNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILIN   90 (239)
T ss_pred             EEcCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEE
Confidence            79999999999999999995 488889998877665544432         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|......+.+.+.+.|++++++|+.+++.+++++.+.|.+  .+++|++||..+..                      
T Consensus        91 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----------------------  148 (239)
T PRK07666         91 NAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK----------------------  148 (239)
T ss_pred             cCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc----------------------
Confidence            999876666777888999999999999999999999998854  37999999988743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +..+...|+.+|+++..++++++.++.+.    |+++++|.||++.|++...
T Consensus       149 ------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~----gi~v~~v~pg~v~t~~~~~  196 (239)
T PRK07666        149 ------------------GAAVTSAYSASKFGVLGLTESLMQEVRKH----NIRVTALTPSTVATDMAVD  196 (239)
T ss_pred             ------------------CCCCCcchHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCcccCcchhh
Confidence                              44456889999999999999999999876    7889999999999998553

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.95  E-value=6.1e-27  Score=200.39  Aligned_cols=211  Identities=20%  Similarity=0.267  Sum_probs=150.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.++++.|+++ +..|++++|+.++++...+++.         .+|++|.++++++++++.+.++++|+|||
T Consensus        11 VTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~   89 (322)
T PRK07453         11 ITGASSGVGLYAAKALAKR-GWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVC   89 (322)
T ss_pred             EEcCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEE
Confidence            7999999999999999999 4688889999888776665542         28999999999999998887789999999


Q ss_pred             ccCCcccc-CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC----ceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          72 NAAIAFKV-NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        72 ~ag~~~~~-~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~----g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||+..+. .....+.+.|+.+|++|+.|++.++++++|.|++.    ++||++||..+.........   .. ....+.
T Consensus        90 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~---~~-~~~~~~  165 (322)
T PRK07453         90 NAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKI---PI-PAPADL  165 (322)
T ss_pred             CCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCcc---CC-CCccch
Confidence            99985432 23456789999999999999999999999998643    59999999876432110000   00 000000


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc-ccCCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV-NTDMSSGK  220 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v-~t~~~~~~  220 (230)
                      ..+......+.. .....+..+..+...|+.||.++..+++.+++++...   .||++++++||+| .|++.++.
T Consensus       166 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~---~gi~v~~v~PG~v~~t~~~~~~  236 (322)
T PRK07453        166 GDLSGFEAGFKA-PISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHES---TGITFSSLYPGCVADTPLFRNT  236 (322)
T ss_pred             hhhhcchhcccc-cccccCccCCCccchhhHhHHHHHHHHHHHHHhhccc---CCeEEEEecCCcccCCcccccC
Confidence            000000000000 0000001223455899999999999999999998532   2799999999999 69887653

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.8e-27  Score=192.98  Aligned_cols=172  Identities=25%  Similarity=0.305  Sum_probs=147.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.+++++|+++ +..|++++|+++..+...+.+.         .+|+++.++++.+++++.+.++++|+|||
T Consensus        11 ItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   89 (250)
T PRK07774         11 VTGAAGGIGQAYAEALARE-GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVN   89 (250)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 5688889998776655544331         38999999999999999999999999999


Q ss_pred             ccCCcc---ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          72 NAAIAF---KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        72 ~ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |+|...   +.++.+.+.+.+++++++|+.+++.+++++++.|.+  .++||++||..++.                   
T Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------------------  150 (250)
T PRK07774         90 NAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-------------------  150 (250)
T ss_pred             CCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-------------------
Confidence            999853   345667788999999999999999999999998854  57999999987632                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                              +...|++||+++++++++++.++...    |+++++++||+++|++....
T Consensus       151 ------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~~  196 (250)
T PRK07774        151 ------------------------YSNFYGLAKVGLNGLTQQLARELGGM----NIRVNAIAPGPIDTEATRTV  196 (250)
T ss_pred             ------------------------CccccHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecCcccCcccccc
Confidence                                    33789999999999999999998876    78999999999999987643

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.1e-27  Score=219.66  Aligned_cols=174  Identities=28%  Similarity=0.358  Sum_probs=149.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+++.+++..+++.         .+|++|+++++++++++.+.++++|++||
T Consensus       376 ItGas~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~  454 (657)
T PRK07201        376 ITGASSGIGRATAIKVAEA-GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVN  454 (657)
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 5688899999888777665543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCC--ChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          72 NAAIAFKVNSSEP--FGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        72 ~ag~~~~~~~~~~--~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||......+.+.  +.+++++++++|+.|++.+++.++|.|++.  ++||++||.+++.                    
T Consensus       455 ~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  514 (657)
T PRK07201        455 NAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT--------------------  514 (657)
T ss_pred             CCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC--------------------
Confidence            9998654443332  247899999999999999999999998643  7999999988743                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                          +.++...|++||+++++++++++.++...    ||+|++|+||+++|+|...
T Consensus       515 --------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~v~pg~v~T~~~~~  562 (657)
T PRK07201        515 --------------------NAPRFSAYVASKAALDAFSDVAASETLSD----GITFTTIHMPLVRTPMIAP  562 (657)
T ss_pred             --------------------CCCCcchHHHHHHHHHHHHHHHHHHHHhh----CCcEEEEECCcCcccccCc
Confidence                                33455889999999999999999999887    7889999999999999754

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.7e-27  Score=193.88  Aligned_cols=171  Identities=21%  Similarity=0.171  Sum_probs=141.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++|...+++..++.+.++.....+.         .+|++|.+++.++++++.+.++++|+|||
T Consensus        14 ItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~   93 (258)
T PRK09134         14 VTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPITLLVN   93 (258)
T ss_pred             EeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            799999999999999999965444444455555555444432         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||...+.++.+.+.+.|++++++|+.|++.+++++++.|++  .++||+++|..+..                      
T Consensus        94 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~----------------------  151 (258)
T PRK09134         94 NASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN----------------------  151 (258)
T ss_pred             CCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC----------------------
Confidence            999877667778888999999999999999999999998864  47999998865522                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                        +.+....|+++|+++++++++++.++...     ++|++|+||++.|..
T Consensus       152 ------------------~~p~~~~Y~~sK~a~~~~~~~la~~~~~~-----i~v~~i~PG~v~t~~  195 (258)
T PRK09134        152 ------------------LNPDFLSYTLSKAALWTATRTLAQALAPR-----IRVNAIGPGPTLPSG  195 (258)
T ss_pred             ------------------CCCCchHHHHHHHHHHHHHHHHHHHhcCC-----cEEEEeecccccCCc
Confidence                              22334689999999999999999998764     889999999998865

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=7.6e-27  Score=193.56  Aligned_cols=178  Identities=26%  Similarity=0.341  Sum_probs=150.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||.+++++|+++ +..|++++|+.++++.....+.         .+|++|+++++++++++.+.++++|++||
T Consensus        17 ItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~   95 (259)
T PRK08213         17 VTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVN   95 (259)
T ss_pred             EECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 5588899998877766554442         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccc-ccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL-LRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~-l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |+|.....+..+.+.+.|++++++|+.+++.+++++.+. |++  .++||++||..+......                 
T Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-----------------  158 (259)
T PRK08213         96 NAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-----------------  158 (259)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-----------------
Confidence            999876666777888999999999999999999999987 643  379999999877432110                 


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         ...+...|+.+|+++++++++++.++.+.    |+++++|+||+++|++...
T Consensus       159 -------------------~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~----gi~v~~v~Pg~~~t~~~~~  206 (259)
T PRK08213        159 -------------------EVMDTIAYNTSKGAVINFTRALAAEWGPH----GIRVNAIAPGFFPTKMTRG  206 (259)
T ss_pred             -------------------cccCcchHHHHHHHHHHHHHHHHHHhccc----CEEEEEEecCcCCCcchhh
Confidence                               01234799999999999999999999886    7899999999999998653

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.5e-27  Score=192.90  Aligned_cols=173  Identities=23%  Similarity=0.310  Sum_probs=143.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEe-cCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~-r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||.+++++|+++|+ .|++.. ++++..+...+.+         ..+|++|.++++++++++.+.++++|+||
T Consensus         7 VtG~~~~iG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   85 (248)
T PRK06123          7 ITGASRGIGAATALLAAERGY-AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALV   85 (248)
T ss_pred             EECCCchHHHHHHHHHHHCCC-eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            799999999999999999965 455554 5555444443333         23899999999999999999999999999


Q ss_pred             EccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          71 NNAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        71 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      ||+|...+ ..+.+.+.++|++++++|+.+++.+++++++.|++     +++||++||..+..                 
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------------  148 (248)
T PRK06123         86 NNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL-----------------  148 (248)
T ss_pred             ECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC-----------------
Confidence            99998643 35667788999999999999999999999998853     36899999988743                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCC-CchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWP-NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                             +.++ ...|+++|+++++++++++.++.+.    ||++++|.||++.|++..
T Consensus       149 -----------------------~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~----~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        149 -----------------------GSPGEYIDYAASKGAIDTMTIGLAKEVAAE----GIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             -----------------------CCCCCccchHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCcccCchhh
Confidence                                   2222 2579999999999999999999876    799999999999999753

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.3e-27  Score=193.26  Aligned_cols=172  Identities=28%  Similarity=0.355  Sum_probs=146.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||.+++++|+++ +..|++++|++++.+...+.+          ..+|++++++++++++++.+   ++|++|
T Consensus         6 ItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv   81 (243)
T PRK07102          6 IIGATSDIARACARRYAAA-GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPDIVL   81 (243)
T ss_pred             EEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCCEEE
Confidence            7999999999999999999 567888899887776654433          23899999999999998765   579999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||+|......+.+.+.+++.+++++|+.+++.+++++.|.|++  .++||++||..+..                     
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------------  140 (243)
T PRK07102         82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR---------------------  140 (243)
T ss_pred             ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC---------------------
Confidence            9999876666777888999999999999999999999998864  48999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.++...|+++|+++++++++++.++...    |+++++|+||+++|++....
T Consensus       141 -------------------~~~~~~~Y~~sK~a~~~~~~~l~~el~~~----gi~v~~v~pg~v~t~~~~~~  189 (243)
T PRK07102        141 -------------------GRASNYVYGSAKAALTAFLSGLRNRLFKS----GVHVLTVKPGFVRTPMTAGL  189 (243)
T ss_pred             -------------------CCCCCcccHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCcccChhhhcc
Confidence                               33445789999999999999999999886    78899999999999986653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.95  E-value=1.1e-26  Score=191.50  Aligned_cols=170  Identities=29%  Similarity=0.375  Sum_probs=146.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||+||||.++++.|+++ +..|++.+|++++++.....+      ..+|++++++++.+++++.+.++++|++|||+|
T Consensus         5 ItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag   83 (248)
T PRK10538          5 VTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAG   83 (248)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 567888999988776654432      238999999999999999999999999999999


Q ss_pred             Ccc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          75 IAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        75 ~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      ... ..+..+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+..                        
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------------  139 (248)
T PRK10538         84 LALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW------------------------  139 (248)
T ss_pred             ccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC------------------------
Confidence            753 345666788999999999999999999999999864  37999999987732                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                      +..+...|+.+|++++++++.++.++...    ||++++|.||++.|.
T Consensus       140 ----------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~v~~v~pg~i~~~  183 (248)
T PRK10538        140 ----------------PYAGGNVYGATKAFVRQFSLNLRTDLHGT----AVRVTDIEPGLVGGT  183 (248)
T ss_pred             ----------------CCCCCchhHHHHHHHHHHHHHHHHHhcCC----CcEEEEEeCCeeccc
Confidence                            34456899999999999999999999886    788999999999743

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=9.3e-27  Score=192.90  Aligned_cols=173  Identities=20%  Similarity=0.264  Sum_probs=150.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||+++++.|+++ +..|++.+|++++.++..+.+.         .+|++|.++++++++++.+.++++|+|||
T Consensus        12 ItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~   90 (262)
T PRK13394         12 VTGAASGIGKEIALELARA-GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVS   90 (262)
T ss_pred             EECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 4578889999877776665543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc-cC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL-RS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l-~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |+|........+.+.+.++.++++|+.+++.+++.+++.| ++  .++||++||..+..                     
T Consensus        91 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~---------------------  149 (262)
T PRK13394         91 NAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE---------------------  149 (262)
T ss_pred             CCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC---------------------
Confidence            9998766667777889999999999999999999999998 43  37999999987633                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|+++|+++++++++++.++...    +|++++|.||++.|++.+
T Consensus       150 -------------------~~~~~~~y~~sk~a~~~~~~~la~~~~~~----~i~v~~v~pg~v~~~~~~  196 (262)
T PRK13394        150 -------------------ASPLKSAYVTAKHGLLGLARVLAKEGAKH----NVRSHVVCPGFVRTPLVD  196 (262)
T ss_pred             -------------------CCCCCcccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcccchhhh
Confidence                               33445799999999999999999998876    789999999999998754

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-26  Score=192.16  Aligned_cols=173  Identities=22%  Similarity=0.279  Sum_probs=150.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++|...|++++|++++.+...+.+         ..+|+++++++.++++++.+.++++|++||
T Consensus        11 ItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   90 (260)
T PRK06198         11 VTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVN   90 (260)
T ss_pred             EeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            79999999999999999996655889999877666554433         228999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |+|......+.+.+.+.|+.++++|+.+++.+++++++.|++   .+++|++||..++.                     
T Consensus        91 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~---------------------  149 (260)
T PRK06198         91 AAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG---------------------  149 (260)
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc---------------------
Confidence            999876666777888999999999999999999999998854   37999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                         +.++...|+.+|+++++++++++.++...    +|++++|+||++.|++.
T Consensus       150 -------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~----~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        150 -------------------GQPFLAAYCASKGALATLTRNAAYALLRN----RIRVNGLNIGWMATEGE  195 (260)
T ss_pred             -------------------CCCCcchhHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeccccCcch
Confidence                               33345899999999999999999999877    78999999999999874

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.95  E-value=1.6e-26  Score=189.61  Aligned_cols=174  Identities=29%  Similarity=0.414  Sum_probs=148.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHh---------hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEK---------LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~---------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+++||.++++.|+++| ..|++.+|+.. ........         +..+|++++++++++++++.+.++++|++|
T Consensus         7 ItG~s~~iG~~la~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi   85 (245)
T PRK12824          7 VTGAKRGIGSAIARELLNDG-YRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILV   85 (245)
T ss_pred             EeCCCchHHHHHHHHHHHcC-CEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999999999999999994 68888888743 22222221         123899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||+|......+.+.+.+.|++++++|+.+++.+++.+++.|++  .++||++||..+..                     
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~---------------------  144 (245)
T PRK12824         86 NNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK---------------------  144 (245)
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc---------------------
Confidence            9999987777778889999999999999999999999999864  47999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|+++|+++++++++++.++.+.    |++++++.||++.|++.+.
T Consensus       145 -------------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~  192 (245)
T PRK12824        145 -------------------GQFGQTNYSAAKAGMIGFTKALASEGARY----GITVNCIAPGYIATPMVEQ  192 (245)
T ss_pred             -------------------CCCCChHHHHHHHHHHHHHHHHHHHHHHh----CeEEEEEEEcccCCcchhh
Confidence                               34455899999999999999999998876    7889999999999998654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.95  E-value=5.9e-27  Score=193.12  Aligned_cols=172  Identities=26%  Similarity=0.308  Sum_probs=146.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH--HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL--EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~--~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||+++||++++++|+++ +..|++.+|+.  .....  .....+|++++++++++++++.+.++++|++|||+|....
T Consensus        13 ItGas~~iG~~la~~l~~~-G~~v~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~   89 (252)
T PRK08220         13 VTGAAQGIGYAVALAFVEA-GAKVIGFDQAF--LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRM   89 (252)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEecch--hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence            7999999999999999999 55777777765  11111  1123389999999999999999999999999999998776


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      .++.+.+.+++++.+++|+.+++.+++++++.|++  .++||++||..+..                             
T Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----------------------------  140 (252)
T PRK08220         90 GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----------------------------  140 (252)
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----------------------------
Confidence            77778889999999999999999999999998854  47999999987633                             


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                 +..+...|+.+|+++++++++++.++...    ||+||+|.||++.|++...
T Consensus       141 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~i~pg~v~t~~~~~  188 (252)
T PRK08220        141 -----------PRIGMAAYGASKAALTSLAKCVGLELAPY----GVRCNVVSPGSTDTDMQRT  188 (252)
T ss_pred             -----------CCCCCchhHHHHHHHHHHHHHHHHHhhHh----CeEEEEEecCcCcchhhhh
Confidence                       34456899999999999999999999887    7899999999999997543

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-26  Score=193.81  Aligned_cols=172  Identities=29%  Similarity=0.373  Sum_probs=149.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-----------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-----------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+||||.++++.|+++ ++.|++++|+++..+...+.+           ..+|++|+++++. ++++.+.++++|++
T Consensus         8 ItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~v   85 (280)
T PRK06914          8 VTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLL   85 (280)
T ss_pred             EECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEE
Confidence            7999999999999999999 567888889887665554322           1389999999999 99999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||+|...+..+.+.+.+.+++++++|+.+++.+++.++|.|++.  ++||++||..+..                    
T Consensus        86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~--------------------  145 (280)
T PRK06914         86 VNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV--------------------  145 (280)
T ss_pred             EECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC--------------------
Confidence            999998877777778889999999999999999999999988643  7999999987743                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +..+...|+.+|+++++++++++.++.+.    |++++++.||+++|++..
T Consensus       146 --------------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~  192 (280)
T PRK06914        146 --------------------GFPGLSPYVSSKYALEGFSESLRLELKPF----GIDVALIEPGSYNTNIWE  192 (280)
T ss_pred             --------------------CCCCCchhHHhHHHHHHHHHHHHHHhhhh----CCEEEEEecCCcccchhh
Confidence                                34456899999999999999999998887    788999999999999765

>KOG1207|consensus

Probab=99.95  E-value=3.4e-28  Score=184.49  Aligned_cols=171  Identities=28%  Similarity=0.255  Sum_probs=149.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      +||+.-|||+++++.|++. +..|+...|+++.+.....+...      .|+++++.+++.+...    +++|.+|||||
T Consensus        12 vTgagaGIG~~~v~~La~a-GA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v----~pidgLVNNAg   86 (245)
T KOG1207|consen   12 VTGAGAGIGKEIVLSLAKA-GAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV----FPIDGLVNNAG   86 (245)
T ss_pred             eecccccccHHHHHHHHhc-CCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc----Cchhhhhccch
Confidence            6999999999999999999 77999999999999988776443      7999988888777643    78999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc-c--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL-R--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l-~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      +....++.+.+.+.|++.|++|+.+.+.++|....-+ .  ..|.||++||.++                          
T Consensus        87 vA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas--------------------------  140 (245)
T KOG1207|consen   87 VATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQAS--------------------------  140 (245)
T ss_pred             hhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhc--------------------------
Confidence            9988889999999999999999999999999865533 2  2378999999998                          


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                    .++..+...||++|+|+++++|++|.|+++.    .||||+|.|-.+-|+|.+..
T Consensus       141 --------------~R~~~nHtvYcatKaALDmlTk~lAlELGp~----kIRVNsVNPTVVmT~MG~dn  191 (245)
T KOG1207|consen  141 --------------IRPLDNHTVYCATKAALDMLTKCLALELGPQ----KIRVNSVNPTVVMTDMGRDN  191 (245)
T ss_pred             --------------ccccCCceEEeecHHHHHHHHHHHHHhhCcc----eeEeeccCCeEEEecccccc
Confidence                          3456677999999999999999999999998    68899999999999997654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.95  E-value=2.4e-26  Score=188.17  Aligned_cols=174  Identities=29%  Similarity=0.368  Sum_probs=147.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHh---------hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEK---------LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~---------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|. .|+++.| +++..++...+         +..+|++++++++++++++.+.++++|+||
T Consensus         5 ItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   83 (242)
T TIGR01829         5 VTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLV   83 (242)
T ss_pred             EECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEE
Confidence            799999999999999999954 6666666 55554443332         223899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||+|...+..+.+.+.+.|++++++|+.+++.+++++++.|++.  ++||++||..+..                     
T Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~---------------------  142 (242)
T TIGR01829        84 NNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK---------------------  142 (242)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC---------------------
Confidence            99998776667788889999999999999999999999998643  7999999987733                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +..+...|+++|++++.++++++.++...    |++++++.||++.|++.+.
T Consensus       143 -------------------~~~~~~~y~~sk~a~~~~~~~la~~~~~~----~i~v~~i~pg~~~t~~~~~  190 (242)
T TIGR01829       143 -------------------GQFGQTNYSAAKAGMIGFTKALAQEGATK----GVTVNTISPGYIATDMVMA  190 (242)
T ss_pred             -------------------CCCCcchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEeeCCCcCccccc
Confidence                               34456899999999999999999998876    7999999999999998654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2e-26  Score=191.36  Aligned_cols=173  Identities=32%  Similarity=0.408  Sum_probs=150.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+||||.++++.|+++| ..|++++|+..+.+...+.+.         .+|++|+++++.+++++.+.++++|+|||
T Consensus         6 VtGasg~iG~~la~~l~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   84 (263)
T PRK06181          6 ITGASEGIGRALAVRLARAG-AQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVN   84 (263)
T ss_pred             EecCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79999999999999999995 588888998877665554432         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCC-ChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEP-FGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|......+.+. +.+.+++.+++|+.+++.+++.+++.|+ ..++||++||..+..                      
T Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~----------------------  142 (263)
T PRK06181         85 NAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT----------------------  142 (263)
T ss_pred             CCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC----------------------
Confidence            9998776666677 8899999999999999999999999885 458999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+.+|+++++++++++.++...    ++++++|.||++.|++.+
T Consensus       143 ------------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~~~~i~pg~v~t~~~~  189 (263)
T PRK06181        143 ------------------GVPTRSGYAASKHALHGFFDSLRIELADD----GVAVTVVCPGFVATDIRK  189 (263)
T ss_pred             ------------------CCCCccHHHHHHHHHHHHHHHHHHHhhhc----CceEEEEecCccccCcch
Confidence                              34455899999999999999999999876    788999999999999854

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.95  E-value=1.9e-26  Score=189.71  Aligned_cols=173  Identities=23%  Similarity=0.297  Sum_probs=149.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||++++++|+++ +..|++.+|+.+..+.....+.         .+|++++++++++++++.+.++++|++||
T Consensus         8 ItGas~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~   86 (250)
T TIGR03206         8 VTGGGGGIGGATCRRFAEE-GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVN   86 (250)
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5578888888876665544332         38999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|.....++.+.+.+.|++++++|+.+++.+++++++.|++  .++||++||.+++.                      
T Consensus        87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~----------------------  144 (250)
T TIGR03206        87 NAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARV----------------------  144 (250)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhcc----------------------
Confidence            999876667777888999999999999999999999998864  37999999988744                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+.+|++++.++++++.++...    |++++.++||++.|++..
T Consensus       145 ------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~----~i~v~~v~pg~~~~~~~~  191 (250)
T TIGR03206       145 ------------------GSSGEAVYAACKGGLVAFSKTMAREHARH----GITVNVVCPGPTDTALLD  191 (250)
T ss_pred             ------------------CCCCCchHHHHHHHHHHHHHHHHHHHhHh----CcEEEEEecCcccchhHH
Confidence                              33345899999999999999999998876    788999999999999754

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK09186 flagellin modification protein A; Provisional

Probab=99.95  E-value=1.7e-26  Score=190.88  Aligned_cols=181  Identities=23%  Similarity=0.262  Sum_probs=146.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-----------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-----------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++++.|+++ +..|++++|++++++...+++           ..+|++|++++.++++++.+.++++|+|
T Consensus         9 ItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~v   87 (256)
T PRK09186          9 ITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGA   87 (256)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Confidence            7999999999999999999 557888899888776654443           1389999999999999999999999999


Q ss_pred             EEccCCcc---ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          70 VNNAAIAF---KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        70 v~~ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |||||...   ...+.+.+.+.+++++++|+.+++.++++++|.|++  .++||++||..+...+....           
T Consensus        88 i~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-----------  156 (256)
T PRK09186         88 VNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEI-----------  156 (256)
T ss_pred             EECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchh-----------
Confidence            99997642   345677888999999999999999999999999864  47999999988754321100           


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                         ....+......|+++|+++++++++++.++...    |++|++|+||++.++.
T Consensus       157 -------------------~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~----~i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        157 -------------------YEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDS----NIRVNCVSPGGILDNQ  205 (256)
T ss_pred             -------------------ccccccCCcchhHHHHHHHHHHHHHHHHHhCcC----CeEEEEEecccccCCC
Confidence                               000111122479999999999999999999876    7889999999987764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2.2e-26  Score=189.33  Aligned_cols=175  Identities=26%  Similarity=0.279  Sum_probs=151.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|+||.+++++|+++ +..|++++|++++.+.....+.        .+|++|+++++++++++.+.++++|+||||
T Consensus        10 ItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~   88 (251)
T PRK07231         10 VTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNN   88 (251)
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999999 4569999999887776655443        389999999999999999999999999999


Q ss_pred             cCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          73 AAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        73 ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      +|... ..++.+.+.+.|++++++|+.+++.+++.+++.|++  .++||++||..+..                      
T Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------------  146 (251)
T PRK07231         89 AGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR----------------------  146 (251)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC----------------------
Confidence            99854 344667788999999999999999999999999853  37999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        +.++...|+.+|++++.+++.++.++...    |+++++++||+++|++....
T Consensus       147 ------------------~~~~~~~y~~sk~~~~~~~~~~a~~~~~~----~i~v~~i~pg~~~t~~~~~~  195 (251)
T PRK07231        147 ------------------PRPGLGWYNASKGAVITLTKALAAELGPD----KIRVNAVAPVVVETGLLEAF  195 (251)
T ss_pred             ------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEECccCCCcchhh
Confidence                              34456899999999999999999999876    79999999999999986643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=2e-26  Score=190.38  Aligned_cols=173  Identities=27%  Similarity=0.388  Sum_probs=152.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||.+++++|+++ +..|++++|++++.+....++.         .+|+++++++.++++++.+.++++|+|||
T Consensus         9 ItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~   87 (258)
T PRK12429          9 VTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVN   87 (258)
T ss_pred             EECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5688889998887776655442         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|........+.+.+.++.++++|+.+++.+++.+++.|++  .++||++||..+..                      
T Consensus        88 ~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~----------------------  145 (258)
T PRK12429         88 NAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV----------------------  145 (258)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc----------------------
Confidence            999877777777888999999999999999999999999864  47999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+++|+++.++++.++.++...    ||+++++.||++.|++..
T Consensus       146 ------------------~~~~~~~y~~~k~a~~~~~~~l~~~~~~~----~i~v~~~~pg~v~~~~~~  192 (258)
T PRK12429        146 ------------------GSAGKAAYVSAKHGLIGLTKVVALEGATH----GVTVNAICPGYVDTPLVR  192 (258)
T ss_pred             ------------------CCCCcchhHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCCCcchhhh
Confidence                              44566899999999999999999998776    789999999999998754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.95  E-value=8.7e-27  Score=190.44  Aligned_cols=176  Identities=19%  Similarity=0.257  Sum_probs=136.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHH-HHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQE-ALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~-~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||++|||++++++|+++|. ..|++..|+...... ..-.+.++|+++.++++++.+    .++++|+||||+|....
T Consensus         5 ItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~----~~~~id~li~~aG~~~~   80 (235)
T PRK09009          5 IVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQHDNVQWHALDVTDEAEIKQLSE----QFTQLDWLINCVGMLHT   80 (235)
T ss_pred             EECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccccCceEEEEecCCCHHHHHHHHH----hcCCCCEEEECCccccc
Confidence            799999999999999999853 356656665432110 011224599999999888544    45799999999998742


Q ss_pred             ------cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          79 ------VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        79 ------~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                            .++.+.+.+.|++.+++|+.+++.+++.++|.|++.  ++|+++||..+...                      
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~----------------------  138 (235)
T PRK09009         81 QDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSIS----------------------  138 (235)
T ss_pred             cccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccc----------------------
Confidence                  345667888999999999999999999999998754  79999998665221                      


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     ..+.+++..|+++|++++.|+++|+.|+....  ++++||+|+||+++|+|...
T Consensus       139 ---------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~--~~i~v~~v~PG~v~t~~~~~  190 (235)
T PRK09009        139 ---------------DNRLGGWYSYRASKAALNMFLKTLSIEWQRSL--KHGVVLALHPGTTDTALSKP  190 (235)
T ss_pred             ---------------cCCCCCcchhhhhHHHHHHHHHHHHHHhhccc--CCeEEEEEcccceecCCCcc
Confidence                           11223457999999999999999999987631  26999999999999999764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.8e-26  Score=188.95  Aligned_cols=172  Identities=25%  Similarity=0.333  Sum_probs=145.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEe-cCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~-r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+++||++++++|+++|. .|++.. ++..........+         ..+|+++++++.++++++.+.++++|+||
T Consensus        11 itGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   89 (252)
T PRK06077         11 VTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADILV   89 (252)
T ss_pred             EeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799999999999999999965 554444 3444444333222         23899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||+|.....++.+.+.+.+++.+++|+.+++.+++++.|.|++.++||++||..++.                       
T Consensus        90 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------------  146 (252)
T PRK06077         90 NNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----------------------  146 (252)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----------------------
Confidence            999987666777788888999999999999999999999998889999999988743                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                       +.++...|+++|+++++++++++.++.+     +++++.+.||+++|++..
T Consensus       147 -----------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-----~i~v~~v~Pg~i~t~~~~  192 (252)
T PRK06077        147 -----------------PAYGLSIYGAMKAAVINLTKYLALELAP-----KIRVNAIAPGFVKTKLGE  192 (252)
T ss_pred             -----------------CCCCchHHHHHHHHHHHHHHHHHHHHhc-----CCEEEEEeeCCccChHHH
Confidence                             4456689999999999999999999876     378999999999999753

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.8e-26  Score=191.21  Aligned_cols=173  Identities=24%  Similarity=0.267  Sum_probs=147.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||++++++|+++| ..|++.+|+.+.+++....+.         .+|+++++++.++++++.+.++++|++||
T Consensus        15 VtGa~g~iG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   93 (274)
T PRK07775         15 VAGASSGIGAATAIELAAAG-FPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVS   93 (274)
T ss_pred             EECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999995 578888887776655544332         28999999999999999998999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|........+.+.+.+++++++|+.|++.+++++++.|++  .++||++||..+..                      
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~----------------------  151 (274)
T PRK07775         94 GAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR----------------------  151 (274)
T ss_pred             CCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC----------------------
Confidence            999876666777788999999999999999999999998753  37999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+.+|++++++++.++.++...    |+++++|+||+++|++..
T Consensus       152 ------------------~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~----gi~v~~v~pG~~~t~~~~  198 (274)
T PRK07775        152 ------------------QRPHMGAYGAAKAGLEAMVTNLQMELEGT----GVRASIVHPGPTLTGMGW  198 (274)
T ss_pred             ------------------CCCCcchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeCCcccCcccc
Confidence                              23345789999999999999999998876    788999999999998643

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.7e-26  Score=189.63  Aligned_cols=174  Identities=24%  Similarity=0.291  Sum_probs=144.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||.++++.|+++| ..|++++|.. +..+...+.+.         .+|+++++++.++++++.+.++++|++|
T Consensus         7 ItG~sg~iG~~la~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   85 (256)
T PRK12745          7 VTGGRRGIGLGIARALAAAG-FDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLV   85 (256)
T ss_pred             EeCCCchHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999995 4667777653 33333333321         3899999999999999999999999999


Q ss_pred             EccCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCccccccchHHHHHHhh
Q psy7994          71 NNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGHLCHVTSEALKKKLL  140 (230)
Q Consensus        71 ~~ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~~~~~~~~~~~~~~~  140 (230)
                      ||+|...  ..++.+.+.+.|++.+++|+.+++.+++++++.|++        .++||++||..+..             
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------  152 (256)
T PRK12745         86 NNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM-------------  152 (256)
T ss_pred             ECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc-------------
Confidence            9999853  245667788999999999999999999999998853        24699999988743             


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         141 HEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                                 +..+...|+.+|++++.++++++.++.+.    |+++++|.||++.|++...
T Consensus       153 ---------------------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~----gi~v~~i~pg~v~t~~~~~  200 (256)
T PRK12745        153 ---------------------------VSPNRGEYCISKAGLSMAAQLFAARLAEE----GIGVYEVRPGLIKTDMTAP  200 (256)
T ss_pred             ---------------------------CCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCEEEEEecCCCcCccccc
Confidence                                       33455899999999999999999999876    7889999999999987643

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=3.1e-26  Score=204.41  Aligned_cols=175  Identities=29%  Similarity=0.414  Sum_probs=149.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc--chhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA--SRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~--~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++++.|+++| ..|+++++..  +.+++..+++    ..+|++++++++++++++.+.++++|+||||+|
T Consensus       215 ItGasggIG~~la~~l~~~G-a~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG  293 (450)
T PRK08261        215 VTGAARGIGAAIAEVLARDG-AHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAG  293 (450)
T ss_pred             EecCCCHHHHHHHHHHHHCC-CEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            79999999999999999995 5677776632  3344443333    238999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcc--cccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP--LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~--~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ...+..+.+.+.+.|+.++++|+.|++.+++++++  .+++.++||++||..+..                         
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~-------------------------  348 (450)
T PRK08261        294 ITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA-------------------------  348 (450)
T ss_pred             cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-------------------------
Confidence            98777788889999999999999999999999999  455678999999988743                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                     +.++...|+++|+++++|+++++.+++..    |+++|+|+||+++|+|....
T Consensus       349 ---------------g~~~~~~Y~asKaal~~~~~~la~el~~~----gi~v~~v~PG~i~t~~~~~~  397 (450)
T PRK08261        349 ---------------GNRGQTNYAASKAGVIGLVQALAPLLAER----GITINAVAPGFIETQMTAAI  397 (450)
T ss_pred             ---------------CCCCChHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEEeCcCcchhhhcc
Confidence                           34456899999999999999999999987    78899999999999987643

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.4e-26  Score=186.23  Aligned_cols=166  Identities=22%  Similarity=0.226  Sum_probs=141.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+.+.        .+|++++++++++++++    +++|++|||
T Consensus         2 ItGas~~iG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~li~~   76 (230)
T PRK07041          2 VVGGSSGIGLALARAFAAE-GARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA----GPFDHVVIT   76 (230)
T ss_pred             eecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc----CCCCEEEEC
Confidence            7999999999999999999 4578889998777666554431        38999999999988763    789999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      +|...+.++.+.+.+.+++++++|+.+++.+++  ++.+++.++||++||.+++.                         
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~~g~iv~~ss~~~~~-------------------------  129 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAPGGSLTFVSGFAAVR-------------------------  129 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcCCeEEEEECchhhcC-------------------------
Confidence            999777777778889999999999999999999  45666779999999998843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     +.++...|+.+|+++++++++++.++..      +++++++||+++|++...
T Consensus       130 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~------irv~~i~pg~~~t~~~~~  175 (230)
T PRK07041        130 ---------------PSASGVLQGAINAALEALARGLALELAP------VRVNTVSPGLVDTPLWSK  175 (230)
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHHHhhC------ceEEEEeecccccHHHHh
Confidence                           3445689999999999999999999864      779999999999998643

>KOG1014|consensus

Probab=99.94  E-value=6.3e-27  Score=193.02  Aligned_cols=174  Identities=21%  Similarity=0.286  Sum_probs=149.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCHHHH-HHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKNSI-KALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~~~v-~~~~~~~~~~~~~id~l   69 (230)
                      ||||+.|||++.|++||++ |.+|++++|++++++.+.+++.+          +|.++.+.+ +++.+.+.+  ..|-+|
T Consensus        54 VTGaTDGIGKayA~eLAkr-G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~--~~VgIL  130 (312)
T KOG1014|consen   54 VTGATDGIGKAYARELAKR-GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG--LDVGIL  130 (312)
T ss_pred             EECCCCcchHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC--CceEEE
Confidence            7999999999999999999 66899999999999999998876          799988873 333333321  257789


Q ss_pred             EEccCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          70 VNNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        70 v~~ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |||+|...  |..+.+.+.+.+++++.+|+.+...+++.++|.|.  ++|-||+++|.++..                  
T Consensus       131 VNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~------------------  192 (312)
T KOG1014|consen  131 VNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLI------------------  192 (312)
T ss_pred             EecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccc------------------
Confidence            99999986  56677777778999999999999999999999884  559999999999944                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                            +.+..+.|+++|+.+..|+++|+.|+..+    ||.|-++.|..|-|+|.....
T Consensus       193 ----------------------p~p~~s~ysasK~~v~~~S~~L~~Ey~~~----gI~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  193 ----------------------PTPLLSVYSASKAFVDFFSRCLQKEYESK----GIFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             ----------------------cChhHHHHHHHHHHHHHHHHHHHHHHHhc----CeEEEEeehhheeccccccCC
Confidence                                  55666999999999999999999999998    788999999999999987543

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.1e-26  Score=186.84  Aligned_cols=170  Identities=25%  Similarity=0.282  Sum_probs=144.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++++|+.+..  ...++..+|++++++++++++++.+.+ ++|++|||+|...+.+
T Consensus         8 ItG~s~~iG~~ia~~l~~~-G~~v~~~~r~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~   83 (234)
T PRK07577          8 VTGATKGIGLALSLRLANL-GHQVIGIARSAIDD--FPGELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQP   83 (234)
T ss_pred             EECCCCcHHHHHHHHHHHC-CCEEEEEeCCcccc--cCceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCC
Confidence            7999999999999999999 56788888876541  122345689999999999999998876 6899999999977777


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.+++++++++|+.+++.++++++|.|++  .++||++||...+                                
T Consensus        84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~--------------------------------  131 (234)
T PRK07577         84 LGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF--------------------------------  131 (234)
T ss_pred             hHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc--------------------------------
Confidence            777788999999999999999999999999864  3799999997532                                


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                               +.++...|+.+|+++++++++++.++.+.    |+++++|+||++.|++...
T Consensus       132 ---------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~----gi~v~~i~pg~~~t~~~~~  179 (234)
T PRK07577        132 ---------GALDRTSYSAAKSALVGCTRTWALELAEY----GITVNAVAPGPIETELFRQ  179 (234)
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHHHhh----CcEEEEEecCcccCccccc
Confidence                     22345799999999999999999999887    7889999999999998654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9e-26  Score=188.77  Aligned_cols=174  Identities=24%  Similarity=0.243  Sum_probs=148.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      |||++++||.++++.|+++| ..|++++|++++.+...+.+.           .+|+++++++.++++++.+.++++|++
T Consensus        12 ItGasg~IG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~l   90 (276)
T PRK05875         12 VTGGGSGIGKGVAAGLVAAG-AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGV   90 (276)
T ss_pred             EECCCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            79999999999999999995 588889998776655544332           279999999999999999999999999


Q ss_pred             EEccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          70 VNNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||+|... ..++.+.+.+.|.+++++|+.+++.+++++++.|.+  .++|+++||..+..                   
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~-------------------  151 (276)
T PRK05875         91 VHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN-------------------  151 (276)
T ss_pred             EECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC-------------------
Confidence            99999753 245666788899999999999999999999998853  47999999987732                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                           +.++...|+++|++++.++++++.++...    |+++++|.||+++|++...
T Consensus       152 ---------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~----~i~v~~i~Pg~v~t~~~~~  199 (276)
T PRK05875        152 ---------------------THRWFGAYGVTKSAVDHLMKLAADELGPS----WVRVNSIRPGLIRTDLVAP  199 (276)
T ss_pred             ---------------------CCCCCcchHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCccCCccccc
Confidence                                 33445899999999999999999999887    7889999999999998653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=1.5e-25  Score=184.56  Aligned_cols=173  Identities=21%  Similarity=0.290  Sum_probs=145.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.++++.|+++| ..|++.+|+.++++...+++.         .+|++++++++++++++.+.++++|+|||
T Consensus        10 ItG~~g~iG~~~a~~l~~~G-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   88 (253)
T PRK08217         10 ITGGAQGLGRAMAEYLAQKG-AKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLIN   88 (253)
T ss_pred             EECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79999999999999999994 578889998877766655442         38999999999999999988899999999


Q ss_pred             ccCCccccCC---------CCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHh
Q psy7994          72 NAAIAFKVNS---------SEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKL  139 (230)
Q Consensus        72 ~ag~~~~~~~---------~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~  139 (230)
                      |+|...+...         .+.+.+.++.++++|+.+++.+++.+++.|.+   .++||++||....             
T Consensus        89 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-------------  155 (253)
T PRK08217         89 NAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-------------  155 (253)
T ss_pred             CCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-------------
Confidence            9997543221         45677899999999999999999999998843   3689999886432             


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         140 LHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                                  +.++...|+++|+++++++++++.++...    |++++++.||+++|++...
T Consensus       156 ----------------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~----~i~v~~v~pg~v~t~~~~~  203 (253)
T PRK08217        156 ----------------------------GNMGQTNYSASKAGVAAMTVTWAKELARY----GIRVAAIAPGVIETEMTAA  203 (253)
T ss_pred             ----------------------------CCCCCchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEeeCCCcCccccc
Confidence                                        23345899999999999999999999876    7889999999999998754

>KOG1210|consensus

Probab=99.94  E-value=8.1e-26  Score=186.29  Aligned_cols=182  Identities=21%  Similarity=0.262  Sum_probs=164.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      |||||+|||+++|.++..+ ++.|-++.|+..++.++...++-           +|++|-++++.++++++..++.+|.+
T Consensus        38 itggS~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l  116 (331)
T KOG1210|consen   38 ITGGSSGLGLALALECKRE-GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNL  116 (331)
T ss_pred             EecCcchhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceE
Confidence            7999999999999999999 77999999999999888776542           89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC---ceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~---g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |+|||...++-+.+.+.+.++..+++|++|++.++++.++.|++.   |+|+.+||.++..                   
T Consensus       117 ~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~-------------------  177 (331)
T KOG1210|consen  117 FCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML-------------------  177 (331)
T ss_pred             EEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc-------------------
Confidence            999999999999999999999999999999999999999999754   5999999999844                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCCCCcc
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTID  226 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~  226 (230)
                                           +..+++.|+++|.|+.+|+..+++|+.++    |+.|..+.|+.+.||.........|+
T Consensus       178 ---------------------~i~GysaYs~sK~alrgLa~~l~qE~i~~----~v~Vt~~~P~~~~tpGfE~En~tkP~  232 (331)
T KOG1210|consen  178 ---------------------GIYGYSAYSPSKFALRGLAEALRQELIKY----GVHVTLYYPPDTLTPGFERENKTKPE  232 (331)
T ss_pred             ---------------------CcccccccccHHHHHHHHHHHHHHHHhhc----ceEEEEEcCCCCCCCccccccccCch
Confidence                                 67788999999999999999999999998    78899999999999986655544444


Q ss_pred             c
Q psy7994         227 Q  227 (230)
Q Consensus       227 ~  227 (230)
                      +
T Consensus       233 ~  233 (331)
T KOG1210|consen  233 E  233 (331)
T ss_pred             h
Confidence            3

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=1.2e-25  Score=185.07  Aligned_cols=173  Identities=25%  Similarity=0.341  Sum_probs=146.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCC--CHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDIL--DKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s--~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+++||.+++++|+++ +..|++++|+.+.++...+++.          .+|++  +++++.++++++.+.++++|+
T Consensus        17 ItG~~g~iG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~   95 (247)
T PRK08945         17 VTGAGDGIGREAALTYARH-GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDG   95 (247)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999 4588889998877665544432          25664  889999999999999999999


Q ss_pred             EEEccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          69 LVNNAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        69 lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||||.... .++.+.+.+.|++.+++|+.+++.++++++++|++  .++||++||..+..                  
T Consensus        96 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------------  157 (247)
T PRK08945         96 VLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ------------------  157 (247)
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC------------------
Confidence            9999998543 45667788999999999999999999999998854  47999999987743                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                            +..+...|++||+++++++++++.++...    |+++++++||+++|++..
T Consensus       158 ----------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~----~i~~~~v~pg~v~t~~~~  204 (247)
T PRK08945        158 ----------------------GRANWGAYAVSKFATEGMMQVLADEYQGT----NLRVNCINPGGTRTAMRA  204 (247)
T ss_pred             ----------------------CCCCCcccHHHHHHHHHHHHHHHHHhccc----CEEEEEEecCCccCcchh
Confidence                                  33455899999999999999999998876    799999999999999754

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.94  E-value=1.6e-25  Score=183.74  Aligned_cols=174  Identities=25%  Similarity=0.323  Sum_probs=144.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||.+++++|+++|...+++..|+.++.++...++         ..+|++|+++++++++++.+.++++|+|||
T Consensus         6 ItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~   85 (247)
T PRK09730          6 VTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVN   85 (247)
T ss_pred             EeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            79999999999999999996544444667776665544433         238999999999999999999999999999


Q ss_pred             ccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          72 NAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        72 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |+|.. ...+..+.+.+.|+.++++|+.+++.+++++++.|.+     .++||++||..+..+                 
T Consensus        86 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~-----------------  148 (247)
T PRK09730         86 NAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG-----------------  148 (247)
T ss_pred             CCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC-----------------
Confidence            99985 3345667888999999999999999999999998743     378999999877442                 


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCC-CchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWP-NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                             .++ ...|+++|+++++++++++.++...    |++++++.||++.|++..
T Consensus       149 -----------------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        149 -----------------------APGEYVDYAASKGAIDTLTTGLSLEVAAQ----GIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             -----------------------CCCcccchHhHHHHHHHHHHHHHHHHHHh----CeEEEEEEeCCCcCcccc
Confidence                                   222 2579999999999999999999876    788999999999999754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=4.4e-26  Score=186.17  Aligned_cols=167  Identities=22%  Similarity=0.271  Sum_probs=135.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc-cc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF-KV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~-~~   79 (230)
                      ||||++|||.+++++|+++ +..|++.+|+........-....+|++++      ++++.+.++++|++|||+|... ..
T Consensus        10 VtGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~   82 (235)
T PRK06550         10 ITGAASGIGLAQARAFLAQ-GAQVYGVDKQDKPDLSGNFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYK   82 (235)
T ss_pred             EcCCCchHHHHHHHHHHHC-CCEEEEEeCCcccccCCcEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCCC
Confidence            7999999999999999999 45777788865432111111234898887      4445556689999999999753 24


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      ++.+.+.++|++++++|+.+++.++++++|.|++  .++||++||..+..                              
T Consensus        83 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------------------  132 (235)
T PRK06550         83 PLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV------------------------------  132 (235)
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc------------------------------
Confidence            5667888999999999999999999999998854  47999999988743                              


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                +.++...|+.+|+++++++++++.++...    ||++|+|+||+++|++..
T Consensus       133 ----------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~----gi~v~~v~pg~v~t~~~~  179 (235)
T PRK06550        133 ----------AGGGGAAYTASKHALAGFTKQLALDYAKD----GIQVFGIAPGAVKTPMTA  179 (235)
T ss_pred             ----------CCCCCcccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCCccCcccc
Confidence                      34456899999999999999999999876    799999999999999864

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2e-25  Score=183.31  Aligned_cols=174  Identities=27%  Similarity=0.362  Sum_probs=145.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec----CcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR----DASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r----~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      ||||++|||+++++.|+++|+ .|++++|    +.+..+...+++         ..+|++++++++++++++.+.++++|
T Consensus        11 ItGasg~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   89 (249)
T PRK12827         11 ITGGSGGLGRAIAVRLAADGA-DVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLD   89 (249)
T ss_pred             EECCCChHHHHHHHHHHHCCC-eEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999955 5665443    333344333332         23899999999999999999989999


Q ss_pred             EEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhc-ccccCC--ceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILF-PLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~-~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +||||+|...+..+.+.+.+.|++++++|+.+++.+++++. +.+++.  +++|++||..+..                 
T Consensus        90 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------  152 (249)
T PRK12827         90 ILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR-----------------  152 (249)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC-----------------
Confidence            99999999777777888889999999999999999999999 666533  7999999988844                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                             +..+...|+.+|++++.++++++.++...    |+++++|+||+++|++...
T Consensus       153 -----------------------~~~~~~~y~~sK~a~~~~~~~l~~~~~~~----~i~~~~i~pg~v~t~~~~~  200 (249)
T PRK12827        153 -----------------------GNRGQVNYAASKAGLIGLTKTLANELAPR----GITVNAVAPGAINTPMADN  200 (249)
T ss_pred             -----------------------CCCCCchhHHHHHHHHHHHHHHHHHhhhh----CcEEEEEEECCcCCCcccc
Confidence                                   33455899999999999999999998876    7889999999999998654

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.8e-25  Score=185.06  Aligned_cols=172  Identities=26%  Similarity=0.271  Sum_probs=148.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-------cccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||+++||.+++++|+++ +..|++++|++++++...+.+.       .+|++|++++..+++++.+.++++|++|||+
T Consensus         7 ItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a   85 (257)
T PRK07074          7 VTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVANA   85 (257)
T ss_pred             EECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            7999999999999999999 4678888998887766655432       3899999999999999999999999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |...+.++.+.+.+.|.+.+++|+.+++.+++++++.+++  .++||++||..+..                        
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------------  141 (257)
T PRK07074         86 GAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA------------------------  141 (257)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC------------------------
Confidence            9876667777888999999999999999999999998753  37999999976521                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                       ..+...|+.+|+++++++++++.++.+.    |++|+++.||++.|++..
T Consensus       142 -----------------~~~~~~y~~sK~a~~~~~~~~a~~~~~~----gi~v~~v~pg~v~t~~~~  187 (257)
T PRK07074        142 -----------------ALGHPAYSAAKAGLIHYTKLLAVEYGRF----GIRANAVAPGTVKTQAWE  187 (257)
T ss_pred             -----------------CCCCcccHHHHHHHHHHHHHHHHHHhHh----CeEEEEEEeCcCCcchhh
Confidence                             1123689999999999999999999987    788999999999999754

>KOG1199|consensus

Probab=99.94  E-value=1.9e-27  Score=180.39  Aligned_cols=175  Identities=23%  Similarity=0.332  Sum_probs=154.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||.+|+|++.+.+|+++ +..|++.+..+++.++...++..      .|++++++++..+..+...||++|.+|||||
T Consensus        14 vtggasglg~ataerlakq-gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vncag   92 (260)
T KOG1199|consen   14 VTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAG   92 (260)
T ss_pred             eecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccc
Confidence            7999999999999999999 66888888888888888888765      7999999999999999999999999999999


Q ss_pred             CccccC------CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCccccccchHHHHHHhh
Q psy7994          75 IAFKVN------SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGHLCHVTSEALKKKLL  140 (230)
Q Consensus        75 ~~~~~~------~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~~~~~~~~~~~~~~~  140 (230)
                      +.+-..      -...+.|+|++++++|+.|+|++++...-+|-.        +|.||++.|.+++              
T Consensus        93 ia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaaf--------------  158 (260)
T KOG1199|consen   93 IAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAF--------------  158 (260)
T ss_pred             eeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeee--------------
Confidence            975322      334677999999999999999999998888831        3789999999883              


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         141 HEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                                .+..++..|++||.++.+++--+++++...    |||++.|+||..+|||....
T Consensus       159 --------------------------dgq~gqaaysaskgaivgmtlpiardla~~----gir~~tiapglf~tpllssl  208 (260)
T KOG1199|consen  159 --------------------------DGQTGQAAYSASKGAIVGMTLPIARDLAGD----GIRFNTIAPGLFDTPLLSSL  208 (260)
T ss_pred             --------------------------cCccchhhhhcccCceEeeechhhhhcccC----ceEEEeecccccCChhhhhh
Confidence                                      356678999999999999999999999998    88899999999999997644

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.3e-25  Score=182.71  Aligned_cols=175  Identities=26%  Similarity=0.351  Sum_probs=149.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+++||.++++.|+++| ..|++. +|++++.+...+.+         ..+|+++++++.++++++.+.++++|+||
T Consensus        10 I~Gasg~iG~~la~~l~~~g-~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   88 (247)
T PRK05565         10 VTGASGGIGRAIAELLAKEG-AKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILV   88 (247)
T ss_pred             EeCCCcHHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            79999999999999999995 566666 88877766554433         23899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |++|......+.+.+.+.+++++++|+.+++.+++.+++.+.+.  +++|++||..+..                     
T Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~---------------------  147 (247)
T PRK05565         89 NNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI---------------------  147 (247)
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc---------------------
Confidence            99998755566678889999999999999999999999988644  7899999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.+....|+.+|++++.++++++.++...    |+++++|+||+++|++.+..
T Consensus       148 -------------------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~----gi~~~~v~pg~v~t~~~~~~  196 (247)
T PRK05565        148 -------------------GASCEVLYSASKGAVNAFTKALAKELAPS----GIRVNAVAPGAIDTEMWSSF  196 (247)
T ss_pred             -------------------CCCCccHHHHHHHHHHHHHHHHHHHHHHc----CeEEEEEEECCccCcccccc
Confidence                               33345789999999999999999998765    79999999999999987653

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-25  Score=185.03  Aligned_cols=175  Identities=18%  Similarity=0.282  Sum_probs=142.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHHh------hhcccCCCHHHHHHHHHHHHhhcCC--Cc--EE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEK------LQKLDILDKNSIKALHDHLEAEHGG--VD--VL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~~------~~~~D~s~~~~v~~~~~~~~~~~~~--id--~l   69 (230)
                      ||||++|||++++++|+++| ..|++.+|++ +.++...+.      ...+|++++++++++++++.+.++.  ++  ++
T Consensus         6 ItGasggiG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK06924          6 ITGTSQGLGEAIANQLLEKG-THVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHL   84 (251)
T ss_pred             EecCCchHHHHHHHHHHhcC-CEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEE
Confidence            79999999999999999995 5788888876 444443332      1239999999999999999877653  22  79


Q ss_pred             EEccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          70 VNNAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        70 v~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |+|+|...+ .++.+.+.+.|.+.+++|+.+++.+++.++|.|++   .++||++||..+..                  
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------  146 (251)
T PRK06924         85 INNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN------------------  146 (251)
T ss_pred             EEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC------------------
Confidence            999998643 45677889999999999999999999999998864   36899999987632                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                            +.++...|+.+|+++++++++++.++...  ++|++|++|.||+++|++..
T Consensus       147 ----------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~--~~~i~v~~v~Pg~v~t~~~~  195 (251)
T PRK06924        147 ----------------------PYFGWSAYCSSKAGLDMFTQTVATEQEEE--EYPVKIVAFSPGVMDTNMQA  195 (251)
T ss_pred             ----------------------CCCCcHHHhHHHHHHHHHHHHHHHHhhhc--CCCeEEEEecCCccccHhHH
Confidence                                  34456899999999999999999998642  12699999999999999743

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.2e-25  Score=181.16  Aligned_cols=174  Identities=28%  Similarity=0.368  Sum_probs=150.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|+||.+++++|+++ +..|++++|++++++...+.+.        .+|+++++++..+++++.+.++++|+|||+
T Consensus        11 ItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~   89 (237)
T PRK07326         11 ITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIAN   89 (237)
T ss_pred             EECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            7999999999999999999 5578888998877766655442        289999999999999999999999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      +|.....++.+.+.+.+++++++|+.+++.+++++++.|+ ..++||++||..+..                        
T Consensus        90 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------------------  145 (237)
T PRK07326         90 AGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN------------------------  145 (237)
T ss_pred             CCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc------------------------
Confidence            9987666677788899999999999999999999999884 347999999987632                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                      +..+...|+.+|+++.++++.++.++...    |+++++|.||++.|++...
T Consensus       146 ----------------~~~~~~~y~~sk~a~~~~~~~~~~~~~~~----gi~v~~v~pg~~~t~~~~~  193 (237)
T PRK07326        146 ----------------FFAGGAAYNASKFGLVGFSEAAMLDLRQY----GIKVSTIMPGSVATHFNGH  193 (237)
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEeeccccCccccc
Confidence                            23345789999999999999999999876    7889999999999988654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.93  E-value=2.3e-25  Score=207.20  Aligned_cols=169  Identities=25%  Similarity=0.288  Sum_probs=148.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++.+|+.+.++...+.+.           .+|++|+++++++++++.+.++++|+|
T Consensus       419 VTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDil  497 (676)
T TIGR02632       419 VTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIV  497 (676)
T ss_pred             EeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            7999999999999999999 5688888998877766544432           389999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||||.....++.+.+.+.|+.++++|+.+++.+++.+++.|++   .++||++||..+..                   
T Consensus       498 V~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~-------------------  558 (676)
T TIGR02632       498 VNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY-------------------  558 (676)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC-------------------
Confidence            99999877677778889999999999999999999999998864   36999999987743                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                           +.++...|+++|+++++++++++.++...    ||+||+|+||.+.|
T Consensus       559 ---------------------~~~~~~aY~aSKaA~~~l~r~lA~el~~~----gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       559 ---------------------AGKNASAYSAAKAAEAHLARCLAAEGGTY----GIRVNTVNPDAVLQ  601 (676)
T ss_pred             ---------------------CCCCCHHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEECCceec
Confidence                                 34456899999999999999999999887    78999999999864

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=8.2e-25  Score=179.27  Aligned_cols=174  Identities=29%  Similarity=0.406  Sum_probs=145.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||.++++.|+++|+ .|++..|+.. ..+...+.+.         .+|+++++++.++++++.+.++++|+||
T Consensus        10 ItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi   88 (248)
T PRK05557         10 VTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILV   88 (248)
T ss_pred             EECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799999999999999999955 5655555443 3333333332         2799999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |++|...+....+.+.+.+++++++|+.+++.+.+.+++.+.+.  +++|++||..+..                     
T Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~---------------------  147 (248)
T PRK05557         89 NNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM---------------------  147 (248)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc---------------------
Confidence            99998777667778889999999999999999999999988644  7999999987643                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|+.+|++++.+++.++.++...    ++++++++||+++|++.+.
T Consensus       148 -------------------~~~~~~~y~~sk~a~~~~~~~~a~~~~~~----~i~~~~v~pg~~~~~~~~~  195 (248)
T PRK05557        148 -------------------GNPGQANYAASKAGVIGFTKSLARELASR----GITVNAVAPGFIETDMTDA  195 (248)
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEecCccCCccccc
Confidence                               33445889999999999999999998876    7889999999999987654

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-25  Score=183.23  Aligned_cols=172  Identities=22%  Similarity=0.183  Sum_probs=139.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH--H--hhhcccCCCHHHHHHHHHH-HHhhc---CCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL--E--KLQKLDILDKNSIKALHDH-LEAEH---GGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~--~--~~~~~D~s~~~~v~~~~~~-~~~~~---~~id~lv~~   72 (230)
                      ||||+||||++++++|+++| ..|++++|+..+.....  .  ....+|+++++++++++++ +.+.+   +++|++|||
T Consensus         6 ItGasggiG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   84 (243)
T PRK07023          6 VTGHSRGLGAALAEQLLQPG-IAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINN   84 (243)
T ss_pred             EecCCcchHHHHHHHHHhCC-CEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEc
Confidence            79999999999999999994 56777888765321110  0  1123899999999998877 55544   479999999


Q ss_pred             cCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          73 AAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        73 ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      +|...+ .++.+.+.+.|++.+++|+.|++.+++.+++.|++  .++||++||..+..                      
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------------  142 (243)
T PRK07023         85 AGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN----------------------  142 (243)
T ss_pred             CcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC----------------------
Confidence            998653 45667788999999999999999999999998864  37999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +..+...|+.+|++++++++.++.+ ...    |+++++|+||+++|++..
T Consensus       143 ------------------~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~----~i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        143 ------------------AYAGWSVYCATKAALDHHARAVALD-ANR----ALRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             ------------------CCCCchHHHHHHHHHHHHHHHHHhc-CCC----CcEEEEecCCccccHHHH
Confidence                              4445689999999999999999999 554    799999999999998743

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.6e-25  Score=179.72  Aligned_cols=169  Identities=27%  Similarity=0.257  Sum_probs=143.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+++||.++++.|+++| ..|++++|+.++++...+..    ..+|+++++++++++++    ++++|++|||+|..
T Consensus        14 ItGa~g~iG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~   88 (245)
T PRK07060         14 VTGASSGIGRACAVALAQRG-ARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIA   88 (245)
T ss_pred             EeCCcchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCC
Confidence            79999999999999999995 57888999887766554432    23899999998888775    47899999999997


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC---ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~---g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      ......+.+.+.|++++++|+.+++.+++++++.+++.   ++||++||..+..                          
T Consensus        89 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--------------------------  142 (245)
T PRK07060         89 SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV--------------------------  142 (245)
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC--------------------------
Confidence            66666678889999999999999999999999988543   7999999987743                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                    +.++...|+.+|++++.++++++.++.+.    |++++++.||++.|++.+
T Consensus       143 --------------~~~~~~~y~~sK~a~~~~~~~~a~~~~~~----~i~v~~v~pg~v~~~~~~  189 (245)
T PRK07060        143 --------------GLPDHLAYCASKAALDAITRVLCVELGPH----GIRVNSVNPTVTLTPMAA  189 (245)
T ss_pred             --------------CCCCCcHhHHHHHHHHHHHHHHHHHHhhh----CeEEEEEeeCCCCCchhh
Confidence                          34455899999999999999999999876    788999999999999854

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.1e-25  Score=177.92  Aligned_cols=182  Identities=24%  Similarity=0.284  Sum_probs=144.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+++||.+++++|+++ +..|++++|+.++.++...   .+..+|+++.++++++++++..  +++|++|||+|...
T Consensus         6 vtG~sg~iG~~la~~L~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~   82 (222)
T PRK06953          6 IVGASRGIGREFVRQYRAD-GWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYG   82 (222)
T ss_pred             EEcCCCchhHHHHHHHHhC-CCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCccc
Confidence            7999999999999999999 5578888888776654432   1234899999999998887643  47999999999863


Q ss_pred             --ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          78 --KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        78 --~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                        .....+.+.++|++++++|+.+++.++++++|.|++ .+++++++|..+.....                        
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------------------  138 (222)
T PRK06953         83 PRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA------------------------  138 (222)
T ss_pred             CCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc------------------------
Confidence              234556688999999999999999999999998865 57999999987744211                        


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCCCCcccc
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQD  228 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~  228 (230)
                                   +..+...|+.+|++++++++.++.++.      ++++|+|+||+++|++.+...++.+++.
T Consensus       139 -------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~------~i~v~~v~Pg~i~t~~~~~~~~~~~~~~  193 (222)
T PRK06953        139 -------------TGTTGWLYRASKAALNDALRAASLQAR------HATCIALHPGWVRTDMGGAQAALDPAQS  193 (222)
T ss_pred             -------------cCCCccccHHhHHHHHHHHHHHhhhcc------CcEEEEECCCeeecCCCCCCCCCCHHHH
Confidence                         111123699999999999999988752      4889999999999999887767666654

>PRK09135 pteridine reductase; Provisional

Probab=99.93  E-value=1.2e-24  Score=178.78  Aligned_cols=173  Identities=23%  Similarity=0.247  Sum_probs=142.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhh----------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKL----------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~----------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||++++++|+++ +..|++++|. ....+.....+          ..+|++|++++..+++++.+.++++|+|
T Consensus        11 ItGa~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   89 (249)
T PRK09135         11 ITGGARRIGAAIARTLHAA-GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDAL   89 (249)
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7999999999999999999 4577777764 44444433222          2389999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||+|...+.++.+.+.+.++.++++|+.|++.+++++.|.+.+ .+.+++++|..+                       
T Consensus        90 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------------------  146 (249)
T PRK09135         90 VNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA-----------------------  146 (249)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh-----------------------
Confidence            99999876666777778899999999999999999999998854 578888876544                       


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       ..+..+...|+.+|++++.++++++.++.+     +++++++.||++.|++.+.
T Consensus       147 -----------------~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-----~i~~~~v~pg~~~~~~~~~  195 (249)
T PRK09135        147 -----------------ERPLKGYPVYCAAKAALEMLTRSLALELAP-----EVRVNAVAPGAILWPEDGN  195 (249)
T ss_pred             -----------------cCCCCCchhHHHHHHHHHHHHHHHHHHHCC-----CCeEEEEEeccccCccccc
Confidence                             224445689999999999999999998865     3889999999999998643

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.93  E-value=1.3e-24  Score=178.74  Aligned_cols=175  Identities=27%  Similarity=0.310  Sum_probs=149.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||.++++.|+++ +..|++++|+.+++....+.+.         .+|++|+++++++++++...++++|+|||
T Consensus        11 ItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~   89 (251)
T PRK12826         11 VTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVA   89 (251)
T ss_pred             EcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 4588889998776655544332         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|...+.++.+.+.+.+++.++.|+.+++.+++.+++.|++  .++||++||..+..                      
T Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~----------------------  147 (251)
T PRK12826         90 NAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR----------------------  147 (251)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc----------------------
Confidence            999887777777888999999999999999999999998853  47999999987730                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       .+..+...|+.+|++++++++.++.++...    |++++.+.||++.|++.+.
T Consensus       148 -----------------~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~----~i~~~~i~pg~~~~~~~~~  196 (251)
T PRK12826        148 -----------------VGYPGLAHYAASKAGLVGFTRALALELAAR----NITVNSVHPGGVDTPMAGN  196 (251)
T ss_pred             -----------------cCCCCccHHHHHHHHHHHHHHHHHHHHHHc----CeEEEEEeeCCCCcchhhh
Confidence                             133445789999999999999999999876    7889999999999987643

>PRK08324 short chain dehydrogenase; Validated

Probab=99.93  E-value=8.1e-25  Score=204.10  Aligned_cols=173  Identities=25%  Similarity=0.284  Sum_probs=153.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+||||+++++.|+++| ..|++++|+.+.++.....+.        .+|++++++++++++++.+.++++|+||||
T Consensus       427 VTGasggIG~~la~~L~~~G-a~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~  505 (681)
T PRK08324        427 VTGAAGGIGKATAKRLAAEG-ACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSN  505 (681)
T ss_pred             EecCCCHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999995 589999999887776655432        389999999999999999999999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      +|.....++.+.+.+.|++++++|+.|++.+++++++.|++   +++||++||..+..                      
T Consensus       506 AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~----------------------  563 (681)
T PRK08324        506 AGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN----------------------  563 (681)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC----------------------
Confidence            99987788888899999999999999999999999999876   47999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc--ccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV--NTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v--~t~~~~  218 (230)
                                        +.++...|+++|+++++++++++.++...    ||++|+|+||.+  .|++..
T Consensus       564 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~Pg~v~~~t~~~~  612 (681)
T PRK08324        564 ------------------PGPNFGAYGAAKAAELHLVRQLALELGPD----GIRVNGVNPDAVVRGSGIWT  612 (681)
T ss_pred             ------------------CCCCcHHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeCceeecCCcccc
Confidence                              34456899999999999999999999887    799999999999  888754

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.6e-25  Score=180.44  Aligned_cols=167  Identities=25%  Similarity=0.255  Sum_probs=140.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+||||.++++.|+++ +..|++++|+++.++...+..         ..+|++|++++..++.      +++|+|||
T Consensus         7 VtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id~vi~   79 (257)
T PRK09291          7 ITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVDVLLN   79 (257)
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCCEEEE
Confidence            7999999999999999999 567888888876655443322         2379999999887654      38999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|.....++.+.+.+.+++.+++|+.+++.+++.+++.+++.  ++||++||..+..                      
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~----------------------  137 (257)
T PRK09291         80 NAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI----------------------  137 (257)
T ss_pred             CCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc----------------------
Confidence            9999877778888999999999999999999999999988543  7999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+++|++++.+++.++.++...    |+++++|+||++.|++..
T Consensus       138 ------------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~----gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        138 ------------------TGPFTGAYCASKHALEAIAEAMHAELKPF----GIQVATVNPGPYLTGFND  184 (257)
T ss_pred             ------------------CCCCcchhHHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCcccccchh
Confidence                              23345799999999999999999999876    788999999999998754

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.5e-24  Score=177.00  Aligned_cols=173  Identities=24%  Similarity=0.298  Sum_probs=148.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-------cccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||+|+||.+++++|+++ +..|++++|++.+..+....+.       .+|++|.++++.+++++.+.++++|+|||++
T Consensus        12 ItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a   90 (239)
T PRK12828         12 ITGGFGGLGRATAAWLAAR-GARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIA   90 (239)
T ss_pred             EECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECC
Confidence            7999999999999999999 5578999998876555443332       2899999999999999999999999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |......+.+.+.+.+++.+++|+.+++.+++++++.+++  .++||++||..+..                        
T Consensus        91 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------------  146 (239)
T PRK12828         91 GAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK------------------------  146 (239)
T ss_pred             cccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc------------------------
Confidence            9876666677788999999999999999999999998853  47999999987743                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                      +.++...|+.+|++++.++++++.++...    |++++.+.||++.|++..
T Consensus       147 ----------------~~~~~~~y~~sk~a~~~~~~~~a~~~~~~----~i~~~~i~pg~v~~~~~~  193 (239)
T PRK12828        147 ----------------AGPGMGAYAAAKAGVARLTEALAAELLDR----GITVNAVLPSIIDTPPNR  193 (239)
T ss_pred             ----------------CCCCcchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcccCcchh
Confidence                            23455889999999999999999998776    788999999999998654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.93  E-value=2.3e-24  Score=175.94  Aligned_cols=174  Identities=30%  Similarity=0.456  Sum_probs=145.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      |||++++||.+++++|+++| ..|++.+|+. +.++.....+         ..+|++|+++++++++++.+.++++|+||
T Consensus         3 ItG~~g~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (239)
T TIGR01830         3 VTGASRGIGRAIALKLAKEG-AKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILV   81 (239)
T ss_pred             EECCCcHHHHHHHHHHHHCC-CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            79999999999999999995 5677777754 4443333332         23899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |++|......+.+.+.+.+++++++|+.+++.+++.+.+.+.+  .+++|++||.++.+                     
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~---------------------  140 (239)
T TIGR01830        82 NNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM---------------------  140 (239)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC---------------------
Confidence            9999876656667788999999999999999999999988743  47999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|+.+|++++.+++.++.++...    |++++.+.||+++|++...
T Consensus       141 -------------------g~~~~~~y~~~k~a~~~~~~~l~~~~~~~----g~~~~~i~pg~~~~~~~~~  188 (239)
T TIGR01830       141 -------------------GNAGQANYAASKAGVIGFTKSLAKELASR----NITVNAVAPGFIDTDMTDK  188 (239)
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEECCCCChhhhh
Confidence                               33455899999999999999999998876    7889999999999987643

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.9e-25  Score=180.06  Aligned_cols=175  Identities=14%  Similarity=0.138  Sum_probs=130.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||+++++.|+++ +..|++++|+. +..+....   ....+|+++.++++.       .++++|++|||||..
T Consensus        19 ITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-------~~~~iDilVnnAG~~   90 (245)
T PRK12367         19 ITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDK-------QLASLDVLILNHGIN   90 (245)
T ss_pred             EEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHH-------hcCCCCEEEECCccC
Confidence            7999999999999999999 45777778876 22221111   122389999988764       346899999999974


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----Cc-eEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----HG-RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~g-~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      .   ..+.+.++|++++++|+.|++.++++++|.|++    ++ .+++.+|.++..                        
T Consensus        91 ~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~------------------------  143 (245)
T PRK12367         91 P---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ------------------------  143 (245)
T ss_pred             C---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC------------------------
Confidence            3   234678899999999999999999999999854    24 344455554422                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCCCCccccC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDN  229 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~a  229 (230)
                                      + .+...|++||+|+..+. +++.++..+..+.|++|+.+.||+++|++... ...+||++|
T Consensus       144 ----------------~-~~~~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~-~~~~~~~vA  202 (245)
T PRK12367        144 ----------------P-ALSPSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSELNPI-GIMSADFVA  202 (245)
T ss_pred             ----------------C-CCCchhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCcccccCcc-CCCCHHHHH
Confidence                            1 12467999999997765 77787776656668999999999999998542 245677665

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=4.2e-24  Score=175.00  Aligned_cols=175  Identities=29%  Similarity=0.377  Sum_probs=145.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||.+++++|+++|...+++..++....+.....+         ..+|++++++++++++++.+.++++|++||
T Consensus        11 ItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~   90 (249)
T PRK12825         11 VTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVN   90 (249)
T ss_pred             EeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79999999999999999995544343444444443333222         238999999999999999888899999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ++|...+..+.+.+.+.+++.+++|+.+++.+++.+.+.+++.  +++|++||..+..                      
T Consensus        91 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~----------------------  148 (249)
T PRK12825         91 NAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP----------------------  148 (249)
T ss_pred             CCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC----------------------
Confidence            9998776667777889999999999999999999999988643  6999999988743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +..+...|+.+|++++++++.++.++...    |++++.++||++.|++...
T Consensus       149 ------------------~~~~~~~y~~sK~~~~~~~~~~~~~~~~~----~i~~~~i~pg~~~~~~~~~  196 (249)
T PRK12825        149 ------------------GWPGRSNYAAAKAGLVGLTKALARELAEY----GITVNMVAPGDIDTDMKEA  196 (249)
T ss_pred             ------------------CCCCchHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEECCccCCcccc
Confidence                              33445889999999999999999998876    7899999999999998654

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-24  Score=177.86  Aligned_cols=172  Identities=24%  Similarity=0.281  Sum_probs=136.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+||||.+++++|+++ +..|++.+|+.+ ..+.....+         ..+|+++++++..+++++.+.++++|++|
T Consensus        11 ItGasggiG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   89 (248)
T PRK07806         11 VTGSSRGIGADTAKILAGA-GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDALV   89 (248)
T ss_pred             EECCCCcHHHHHHHHHHHC-CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEE
Confidence            7999999999999999999 457777777653 344333322         23899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||+|.....      ...++..+++|+.+++.+++++.|.|+++++||++||..+...+.                    
T Consensus        90 ~~ag~~~~~------~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------  143 (248)
T PRK07806         90 LNASGGMES------GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT--------------------  143 (248)
T ss_pred             ECCCCCCCC------CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc--------------------
Confidence            999874321      123567899999999999999999998778999999965522100                    


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                     ..+.+.+..|+.||++++.++++++.++...    |++||+|.||++.|++..
T Consensus       144 ---------------~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~----~i~v~~v~pg~~~~~~~~  192 (248)
T PRK07806        144 ---------------VKTMPEYEPVARSKRAGEDALRALRPELAEK----GIGFVVVSGDMIEGTVTA  192 (248)
T ss_pred             ---------------ccCCccccHHHHHHHHHHHHHHHHHHHhhcc----CeEEEEeCCccccCchhh
Confidence                           0112235789999999999999999999987    788999999999987643

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.7e-24  Score=176.85  Aligned_cols=173  Identities=27%  Similarity=0.321  Sum_probs=146.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||+|+||++++++|+++ +..|++++|+.+..+...+.+       ..+|++|++++..+++++.+.++++|+|||++
T Consensus        16 ItGa~g~iG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a   94 (264)
T PRK12829         16 VTGGASGIGRAIAEAFAEA-GARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNA   94 (264)
T ss_pred             EeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            7999999999999999999 457889999877666554432       33899999999999999999999999999999


Q ss_pred             CCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC---ceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          74 AIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        74 g~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~---g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |.. ........+.+.|++++++|+.+++.+++.+++.+++.   ++|+++||..+..                      
T Consensus        95 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~----------------------  152 (264)
T PRK12829         95 GIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL----------------------  152 (264)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc----------------------
Confidence            987 44556678889999999999999999999999877543   5788888877632                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+.+|++++.+++.++.++...    +++++++.||++.|++..
T Consensus       153 ------------------~~~~~~~y~~~K~a~~~~~~~l~~~~~~~----~i~~~~l~pg~v~~~~~~  199 (264)
T PRK12829        153 ------------------GYPGRTPYAASKWAVVGLVKSLAIELGPL----GIRVNAILPGIVRGPRMR  199 (264)
T ss_pred             ------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCCcCChHHH
Confidence                              33445789999999999999999998766    688999999999998754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.92  E-value=5.6e-24  Score=175.40  Aligned_cols=172  Identities=26%  Similarity=0.342  Sum_probs=147.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||+++++.|+++| ..|++++|+.+..+.....+         ..+|++|.++++.+++++.+.++++|+|||
T Consensus         6 ItGa~g~lG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~   84 (255)
T TIGR01963         6 VTGAASGIGLAIALALAAAG-ANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVN   84 (255)
T ss_pred             EcCCcchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999995 58888999877666554433         238999999999999999998999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|........+.+.+.++++++.|+.|++.+++.+++.|++  .+++|++||..+..                      
T Consensus        85 ~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~----------------------  142 (255)
T TIGR01963        85 NAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV----------------------  142 (255)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC----------------------
Confidence            999876666667788899999999999999999999998864  37999999977643                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                        +.+....|+.+|++++.++++++.++...    +++++.+.||++.|++.
T Consensus       143 ------------------~~~~~~~y~~sk~a~~~~~~~~~~~~~~~----~i~v~~i~pg~v~~~~~  188 (255)
T TIGR01963       143 ------------------ASPFKSAYVAAKHGLIGLTKVLALEVAAH----GITVNAICPGYVRTPLV  188 (255)
T ss_pred             ------------------CCCCCchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCccccHHH
Confidence                              33345899999999999999999998766    78899999999998863

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.92  E-value=6e-24  Score=173.94  Aligned_cols=173  Identities=27%  Similarity=0.404  Sum_probs=149.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+++||.++++.|+++ +..|++++|++++.+.....+.         .+|++|++++..+++++...++++|++||
T Consensus        10 ItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   88 (246)
T PRK05653         10 VTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVN   88 (246)
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 4568999999887766555443         28999999999999999988999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ++|.....+..+.+.+.+++.++.|+.+++.+++++.+.|++.  ++||++||..+..                      
T Consensus        89 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~----------------------  146 (246)
T PRK05653         89 NAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT----------------------  146 (246)
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------------------
Confidence            9998776667778889999999999999999999999988543  6999999977632                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +..+...|+.+|++++.++++++.++...    |+++++|.||.+.+++..
T Consensus       147 ------------------~~~~~~~y~~sk~~~~~~~~~l~~~~~~~----~i~~~~i~pg~~~~~~~~  193 (246)
T PRK05653        147 ------------------GNPGQTNYSAAKAGVIGFTKALALELASR----GITVNAVAPGFIDTDMTE  193 (246)
T ss_pred             ------------------CCCCCcHhHhHHHHHHHHHHHHHHHHhhc----CeEEEEEEeCCcCCcchh
Confidence                              33445789999999999999999988876    788999999999998765

>PRK08264 short chain dehydrogenase; Validated

Probab=99.92  E-value=3.8e-24  Score=175.03  Aligned_cols=171  Identities=32%  Similarity=0.371  Sum_probs=143.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC-cc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI-AF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~-~~   77 (230)
                      ||||+|+||++++++|+++|...|++++|+.+++++...  .+..+|++++++++++++.    ++++|+|||++|. ..
T Consensus        11 ItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~   86 (238)
T PRK08264         11 VTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRT   86 (238)
T ss_pred             EECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCcCCC
Confidence            799999999999999999965489999998876653111  1224899999999888775    4689999999998 55


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ..++.+.+.+.+.+++++|+.+++.+++++++.+++  .+++|++||..+..                            
T Consensus        87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~----------------------------  138 (238)
T PRK08264         87 GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV----------------------------  138 (238)
T ss_pred             CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc----------------------------
Confidence            566777889999999999999999999999998854  47999999987743                            


Q ss_pred             HHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                  +..+...|+.+|++++++++.++.++.+.    |++++++.||.++|++...
T Consensus       139 ------------~~~~~~~y~~sK~a~~~~~~~l~~~~~~~----~i~~~~v~pg~v~t~~~~~  186 (238)
T PRK08264        139 ------------NFPNLGTYSASKAAAWSLTQALRAELAPQ----GTRVLGVHPGPIDTDMAAG  186 (238)
T ss_pred             ------------CCCCchHhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeCCccccccccc
Confidence                        34456899999999999999999999876    7889999999999998654

>PRK08017 oxidoreductase; Provisional

Probab=99.92  E-value=9e-24  Score=174.53  Aligned_cols=174  Identities=24%  Similarity=0.258  Sum_probs=146.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh---hhcccCCCHHHHHHHHHHHHhhc-CCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK---LQKLDILDKNSIKALHDHLEAEH-GGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~---~~~~D~s~~~~v~~~~~~~~~~~-~~id~lv~~ag~~   76 (230)
                      ||||+||||.++++.|+++ +..|++++|+.++++...+.   ...+|++|.+++..+++++.... +++|.+|||+|..
T Consensus         7 VtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~   85 (256)
T PRK08017          7 ITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFG   85 (256)
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCC
Confidence            7999999999999999999 45788889988776654321   22389999999999999887754 6899999999987


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      ...+..+.+.+.+++++++|+.|++.+++.+++.|++  .++||++||..+..                           
T Consensus        86 ~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~---------------------------  138 (256)
T PRK08017         86 VYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI---------------------------  138 (256)
T ss_pred             CccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc---------------------------
Confidence            6666777888999999999999999999999998864  37999999987743                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                   +.++...|+.+|++++.++++++.++...    ++++++|.||++.|++...
T Consensus       139 -------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~  186 (256)
T PRK08017        139 -------------STPGRGAYAASKYALEAWSDALRMELRHS----GIKVSLIEPGPIRTRFTDN  186 (256)
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHHHhhc----CCEEEEEeCCCcccchhhc
Confidence                         33455889999999999999999998877    7889999999999987653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=1.5e-23  Score=171.38  Aligned_cols=171  Identities=16%  Similarity=0.191  Sum_probs=143.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh--------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL--------QKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~--------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||.++++.|+++ +..|++++|++++++...+.+        ..+|++++++++++++++...++++|.+|++
T Consensus        10 ItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~   88 (238)
T PRK05786         10 IIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVT   88 (238)
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEc
Confidence            7999999999999999999 558888999887766543322        2389999999999999998888999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      +|.....+..  +.+.++.++++|+.+++.+++.++|.|++++++|++||..+...                        
T Consensus        89 ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------------------  142 (238)
T PRK05786         89 VGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK------------------------  142 (238)
T ss_pred             CCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc------------------------
Confidence            9975433222  33788999999999999999999999988899999999766321                        


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                     +.++...|+.+|++++.++++++.++...    |+++++|.||++.|++.
T Consensus       143 ---------------~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~----gi~v~~i~pg~v~~~~~  188 (238)
T PRK05786        143 ---------------ASPDQLSYAVAKAGLAKAVEILASELLGR----GIRVNGIAPTTISGDFE  188 (238)
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCccCCCCC
Confidence                           22344789999999999999999999876    78899999999999874

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-23  Score=172.59  Aligned_cols=177  Identities=20%  Similarity=0.218  Sum_probs=129.9

Q ss_pred             HHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHH
Q psy7994          12 IVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH   91 (230)
Q Consensus        12 ~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~   91 (230)
                      +++.|+++ +..|++.+|+.++.+.  ..+..+|++|.++++++++++.   +++|+||||||...        .+.+++
T Consensus         1 ~a~~l~~~-G~~Vv~~~r~~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~--------~~~~~~   66 (241)
T PRK12428          1 TARLLRFL-GARVIGVDRREPGMTL--DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG--------TAPVEL   66 (241)
T ss_pred             ChHHHHhC-CCEEEEEeCCcchhhh--hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC--------CCCHHH
Confidence            47889998 5678888898776532  2445699999999999998874   68999999999752        235889


Q ss_pred             HHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCC
Q psy7994          92 TMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP  171 (230)
Q Consensus        92 ~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (230)
                      ++++|+.+++.+++.++|.|++.|+||++||.+++..+...+..     .+..+.......+. +       ....+.++
T Consensus        67 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~-------~~~~~~~~  133 (241)
T PRK12428         67 VARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELH-----KALAATASFDEGAA-W-------LAAHPVAL  133 (241)
T ss_pred             hhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHH-----HhhhccchHHHHHH-h-------hhccCCCc
Confidence            99999999999999999999878999999999886432211100     00000000000000 0       00123445


Q ss_pred             CchhhHHHHHHHHHHHHHH-HhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         172 NSAYAATKLGVTKLSFLQH-ALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       172 ~~~Y~~sK~a~~~l~~~la-~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                      ...|++||+++++++++++ .++...    ||+||+|+||++.|+|.+.
T Consensus       134 ~~~Y~~sK~a~~~~~~~la~~e~~~~----girvn~v~PG~v~T~~~~~  178 (241)
T PRK12428        134 ATGYQLSKEALILWTMRQAQPWFGAR----GIRVNCVAPGPVFTPILGD  178 (241)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcc----CeEEEEeecCCccCccccc
Confidence            6899999999999999999 899876    7999999999999998654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.3e-22  Score=160.88  Aligned_cols=167  Identities=32%  Similarity=0.412  Sum_probs=138.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-----hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-----LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|+||+++++.|+++  +.|++++|+.+..+...+.     +..+|++|++++.+++++.    +++|+|||++|.
T Consensus         8 VtG~~g~iG~~l~~~l~~~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~id~vi~~ag~   81 (227)
T PRK08219          8 ITGASRGIGAAIARELAPT--HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL----GRLDVLVHNAGV   81 (227)
T ss_pred             EecCCcHHHHHHHHHHHhh--CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc----CCCCEEEECCCc
Confidence            7999999999999999998  5688888887765544332     2348999999998888753    589999999998


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      ....+..+.+.+.|.+++++|+.+++.+++.+++.+++ .+++|++||..+..                           
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~---------------------------  134 (227)
T PRK08219         82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLR---------------------------  134 (227)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcC---------------------------
Confidence            76666677888999999999999999999999998865 47999999987743                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                   +..+...|+.+|.+++.+++.++.++...     +++++|.||++.|++..
T Consensus       135 -------------~~~~~~~y~~~K~a~~~~~~~~~~~~~~~-----i~~~~i~pg~~~~~~~~  180 (227)
T PRK08219        135 -------------ANPGWGSYAASKFALRALADALREEEPGN-----VRVTSVHPGRTDTDMQR  180 (227)
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHhcCC-----ceEEEEecCCccchHhh
Confidence                         33445899999999999999998877653     77999999999888643

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.88  E-value=1e-21  Score=155.41  Aligned_cols=171  Identities=22%  Similarity=0.280  Sum_probs=146.2

Q ss_pred             CcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHhhh-----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           6 KGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEKLQ-----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         6 ~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~~~-----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      +.|++.||+.|.++ +..+.++...+.   +.++..+++.     .||+++.+++..+++++.+.+|++|.|||+.++.+
T Consensus        18 rSIAwGIAk~l~~~-GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~   96 (259)
T COG0623          18 RSIAWGIAKALAEQ-GAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAP   96 (259)
T ss_pred             ccHHHHHHHHHHHc-CCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCC
Confidence            78999999999999 667777776652   2233333332     29999999999999999999999999999999986


Q ss_pred             ----ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          78 ----KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        78 ----~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                          .+.+.+.+.|.|...+++..++...+++++.|+|.++|+||.++-.++                            
T Consensus        97 k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs----------------------------  148 (259)
T COG0623          97 KEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS----------------------------  148 (259)
T ss_pred             hHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc----------------------------
Confidence                356777889999999999999999999999999999999999998777                            


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                  ++-.|++..-+.+|++|++-+|.||.+++++    |||||+|+.||++|--.....
T Consensus       149 ------------~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~----gIRVNaISAGPIrTLAasgI~  200 (259)
T COG0623         149 ------------ERVVPNYNVMGVAKAALEASVRYLAADLGKE----GIRVNAISAGPIRTLAASGIG  200 (259)
T ss_pred             ------------eeecCCCchhHHHHHHHHHHHHHHHHHhCcc----CeEEeeecccchHHHHhhccc
Confidence                        3345566889999999999999999999998    888999999999997665443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.88  E-value=5.6e-22  Score=202.23  Aligned_cols=169  Identities=19%  Similarity=0.154  Sum_probs=141.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-----------------------------------------------h
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-----------------------------------------------R   33 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-----------------------------------------------~   33 (230)
                      ||||++|||.+++++|+++++..|++++|+..                                               .
T Consensus      2002 VTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~e 2081 (2582)
T TIGR02813      2002 VTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLE 2081 (2582)
T ss_pred             EeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHH
Confidence            79999999999999999997789999999820                                               0


Q ss_pred             hHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHH
Q psy7994          34 GQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVC  104 (230)
Q Consensus        34 ~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  104 (230)
                      .....+.+.         .+|++|.++++++++++.+. ++||+||||||+.....+.+.+.++|+++|++|+.|.+.++
T Consensus      2082 i~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll 2160 (2582)
T TIGR02813      2082 IAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLL 2160 (2582)
T ss_pred             HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence            011111221         28999999999999999887 68999999999988788889999999999999999999999


Q ss_pred             HHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHH
Q psy7994         105 DILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTK  184 (230)
Q Consensus       105 ~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~  184 (230)
                      +++.+.+.  ++||++||.++.+                                        +..++..|+++|.+++.
T Consensus      2161 ~al~~~~~--~~IV~~SSvag~~----------------------------------------G~~gqs~YaaAkaaL~~ 2198 (2582)
T TIGR02813      2161 AALNAENI--KLLALFSSAAGFY----------------------------------------GNTGQSDYAMSNDILNK 2198 (2582)
T ss_pred             HHHHHhCC--CeEEEEechhhcC----------------------------------------CCCCcHHHHHHHHHHHH
Confidence            99876433  4799999999854                                        55567899999999999


Q ss_pred             HHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         185 LSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       185 l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                      +++.++.++.      +++|++|+||+++|+|..
T Consensus      2199 la~~la~~~~------~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2199 AALQLKALNP------SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHcC------CcEEEEEECCeecCCccc
Confidence            9999888763      378999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1204|consensus

Probab=99.88  E-value=6.3e-23  Score=162.03  Aligned_cols=173  Identities=25%  Similarity=0.259  Sum_probs=135.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      +||+|+|||..++..+.+++.. .++...|....++........      .|++...-+..+++..+..+++.|++||||
T Consensus        11 lTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NA   90 (253)
T KOG1204|consen   11 LTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNA   90 (253)
T ss_pred             EecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEecC
Confidence            6999999998888888877332 233333333322221111100      577777788899999999999999999999


Q ss_pred             CCccccC-C--CCCChhHHHHHHHHhhhhHHHHHHHhcccccCC---ceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          74 AIAFKVN-S--SEPFGSQALHTMRTNYFALIDVCDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        74 g~~~~~~-~--~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~---g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |...+.. .  ...+.++|++.|+.|+++.+.+.+.++|.+++.   +.+||+||.+...                    
T Consensus        91 G~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~--------------------  150 (253)
T KOG1204|consen   91 GSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR--------------------  150 (253)
T ss_pred             CCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc--------------------
Confidence            9875432 2  356779999999999999999999999998765   8999999998833                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          |...+..||.+|+|.++|.+.+|.|-. +    ++++.+++||.++|+|..
T Consensus       151 --------------------p~~~wa~yc~~KaAr~m~f~~lA~EEp-~----~v~vl~~aPGvvDT~mq~  196 (253)
T KOG1204|consen  151 --------------------PFSSWAAYCSSKAARNMYFMVLASEEP-F----DVRVLNYAPGVVDTQMQV  196 (253)
T ss_pred             --------------------cccHHHHhhhhHHHHHHHHHHHhhcCc-c----ceeEEEccCCcccchhHH
Confidence                                455569999999999999999999887 5    689999999999999965

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.86  E-value=8.7e-21  Score=147.02  Aligned_cols=163  Identities=17%  Similarity=0.149  Sum_probs=132.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---Hhh---------hcccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---EKL---------QKLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||.++++.|+++|...|++.+|+....+...   ..+         ..+|++++++++++++++...++++|+
T Consensus         5 i~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   84 (180)
T smart00822        5 ITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLRG   84 (180)
T ss_pred             EEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeE
Confidence            69999999999999999997667888888765443221   121         228999999999999999988999999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      +||++|......+...+.+.+++++++|+.+++.+++++.+  ...+++|++||..+..                     
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~ii~~ss~~~~~---------------------  141 (180)
T smart00822       85 VIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD--LPLDFFVLFSSVAGVL---------------------  141 (180)
T ss_pred             EEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc--CCcceEEEEccHHHhc---------------------
Confidence            99999987666677788899999999999999999999854  2447999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN  213 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~  213 (230)
                                         +..+...|+.+|.++..+++.++    ..    |+++.++.||+++
T Consensus       142 -------------------~~~~~~~y~~sk~~~~~~~~~~~----~~----~~~~~~~~~g~~~  179 (180)
T smart00822      142 -------------------GNPGQANYAAANAFLDALAAHRR----AR----GLPATSINWGAWA  179 (180)
T ss_pred             -------------------CCCCchhhHHHHHHHHHHHHHHH----hc----CCceEEEeecccc
Confidence                               33455899999999999886643    33    5669999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.86  E-value=3.9e-21  Score=168.35  Aligned_cols=169  Identities=18%  Similarity=0.201  Sum_probs=124.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK------LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||+||||++++++|+++ +..|++++|++++++.....      ...+|++|++++.+.+       +++|++|||||
T Consensus       183 ITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l-------~~IDiLInnAG  254 (406)
T PRK07424        183 VTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL-------EKVDILIINHG  254 (406)
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh-------CCCCEEEECCC
Confidence            7999999999999999999 55777778877665443321      2238999998876543       58999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC------ceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH------GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~------g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ...   ..+.+.+++++++++|+.|++.++++++|.|+++      +.+|++|+ ++..                     
T Consensus       255 i~~---~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~---------------------  309 (406)
T PRK07424        255 INV---HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVN---------------------  309 (406)
T ss_pred             cCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cccc---------------------
Confidence            853   2356788999999999999999999999998643      24566654 3311                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCCCCcccc
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQD  228 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~  228 (230)
                                          .+....|++||+|+.+++. +.++.  .    ++.|..+.||+++|++.. ....+||++
T Consensus       310 --------------------~~~~~~Y~ASKaAl~~l~~-l~~~~--~----~~~I~~i~~gp~~t~~~~-~~~~spe~v  361 (406)
T PRK07424        310 --------------------PAFSPLYELSKRALGDLVT-LRRLD--A----PCVVRKLILGPFKSNLNP-IGVMSADWV  361 (406)
T ss_pred             --------------------CCCchHHHHHHHHHHHHHH-HHHhC--C----CCceEEEEeCCCcCCCCc-CCCCCHHHH
Confidence                                1123679999999999984 33332  1    345677889999999854 335678877


Q ss_pred             CC
Q psy7994         229 NI  230 (230)
Q Consensus       229 a~  230 (230)
                      |+
T Consensus       362 A~  363 (406)
T PRK07424        362 AK  363 (406)
T ss_pred             HH
Confidence            63

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.82  E-value=2.2e-19  Score=141.62  Aligned_cols=163  Identities=20%  Similarity=0.238  Sum_probs=122.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||.||||..+++.|+++|..+|++++|+..   ......++++.         +|++|+++++++++++.+.+++|+.
T Consensus         5 itGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~g   84 (181)
T PF08659_consen    5 ITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDG   84 (181)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEE
T ss_pred             EECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcce
Confidence            79999999999999999999889999999932   23334444442         9999999999999999999999999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||++|...+..+.+.+.+.++.++...+.|.+.+.+.+.+  .+-..+|.+||+.+..                     
T Consensus        85 Vih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~--~~l~~~i~~SSis~~~---------------------  141 (181)
T PF08659_consen   85 VIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN--RPLDFFILFSSISSLL---------------------  141 (181)
T ss_dssp             EEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT--TTTSEEEEEEEHHHHT---------------------
T ss_pred             eeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc--CCCCeEEEECChhHhc---------------------
Confidence            99999998888899999999999999999999999998865  3446899999998854                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN  213 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~  213 (230)
                                         |.+++..|+++.+.++.+++...    ..    |..+.+|+.|+.+
T Consensus       142 -------------------G~~gq~~YaaAN~~lda~a~~~~----~~----g~~~~sI~wg~W~  179 (181)
T PF08659_consen  142 -------------------GGPGQSAYAAANAFLDALARQRR----SR----GLPAVSINWGAWD  179 (181)
T ss_dssp             -------------------T-TTBHHHHHHHHHHHHHHHHHH----HT----TSEEEEEEE-EBS
T ss_pred             -------------------cCcchHhHHHHHHHHHHHHHHHH----hC----CCCEEEEEccccC
Confidence                               66678999999999988875432    23    3558888887653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1478|consensus

Probab=99.80  E-value=4.1e-19  Score=142.48  Aligned_cols=184  Identities=22%  Similarity=0.254  Sum_probs=145.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC----eEEEEecCcchhHHHHHhhhc-------------ccCCCHHHHHHHHHHHHhhc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQK-------------LDILDKNSIKALHDHLEAEH   63 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~----~vi~~~r~~~~~~~~~~~~~~-------------~D~s~~~~v~~~~~~~~~~~   63 (230)
                      |||+++|||.++|++|.+.-..    .+++++|+-++.++++..+..             .|+++..++.++..++.++|
T Consensus         8 ITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf   87 (341)
T KOG1478|consen    8 ITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRF   87 (341)
T ss_pred             EecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHh
Confidence            7999999999999999997443    478899999999998887764             79999999999999999999


Q ss_pred             CCCcEEEEccCCccccCCC---------------------------CCChhHHHHHHHHhhhhHHHHHHHhcccc--cCC
Q psy7994          64 GGVDVLVNNAAIAFKVNSS---------------------------EPFGSQALHTMRTNYFALIDVCDILFPLL--RSH  114 (230)
Q Consensus        64 ~~id~lv~~ag~~~~~~~~---------------------------~~~~~~~~~~~~~n~~g~~~l~~~~~~~l--~~~  114 (230)
                      .++|.+..|||......+.                           ..+.|++..+|++||+|+|.+.+.+.|++  .+.
T Consensus        88 ~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~~  167 (341)
T KOG1478|consen   88 QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSDN  167 (341)
T ss_pred             hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCCC
Confidence            9999999999985211100                           12447789999999999999999999987  344


Q ss_pred             ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh
Q psy7994         115 GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       115 g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~  194 (230)
                      ..+|.+||..+........+                     +-          -..+..+|..||.+++-+.-.+-+.+.
T Consensus       168 ~~lvwtSS~~a~kk~lsleD---------------------~q----------~~kg~~pY~sSKrl~DlLh~A~~~~~~  216 (341)
T KOG1478|consen  168 PQLVWTSSRMARKKNLSLED---------------------FQ----------HSKGKEPYSSSKRLTDLLHVALNRNFK  216 (341)
T ss_pred             CeEEEEeecccccccCCHHH---------------------Hh----------hhcCCCCcchhHHHHHHHHHHHhcccc
Confidence            69999999888543322222                     11          122447999999999888777777777


Q ss_pred             hhhccCCeEEEEecCCccccCCCCC
Q psy7994         195 QDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       195 ~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                      +.    |+--.+++||..-|.+...
T Consensus       217 ~~----g~~qyvv~pg~~tt~~~~~  237 (341)
T KOG1478|consen  217 PL----GINQYVVQPGIFTTNSFSE  237 (341)
T ss_pred             cc----chhhhcccCceeecchhhh
Confidence            76    6668999999988877543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.78  E-value=1e-17  Score=143.64  Aligned_cols=155  Identities=25%  Similarity=0.290  Sum_probs=119.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCcchhHHHHHhh-------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDASRGQEALEKL-------QKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~~~~~~~~~~~-------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|+||++++++|+++| +..|++.+|+..........+       ..+|++|++++.++++       ++|+|||+
T Consensus         9 VTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~   81 (324)
T TIGR03589         9 ITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------GVDYVVHA   81 (324)
T ss_pred             EeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------cCCEEEEC
Confidence            79999999999999999985 357888888765543332222       2389999999888775       58999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ||.... +..   .....+++++|+.|++.+++++.+.  ..++||++||....                          
T Consensus        82 Ag~~~~-~~~---~~~~~~~~~~Nv~g~~~ll~aa~~~--~~~~iV~~SS~~~~--------------------------  129 (324)
T TIGR03589        82 AALKQV-PAA---EYNPFECIRTNINGAQNVIDAAIDN--GVKRVVALSTDKAA--------------------------  129 (324)
T ss_pred             cccCCC-chh---hcCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCCC--------------------------
Confidence            997531 111   2223578999999999999998752  33699999986441                          


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                       .|..+|+++|++.+.+++.++.++...    |++++++.||.+..+
T Consensus       130 -----------------~p~~~Y~~sK~~~E~l~~~~~~~~~~~----gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       130 -----------------NPINLYGATKLASDKLFVAANNISGSK----GTRFSVVRYGNVVGS  171 (324)
T ss_pred             -----------------CCCCHHHHHHHHHHHHHHHHHhhcccc----CcEEEEEeecceeCC
Confidence                             134789999999999999888777665    788999999999765

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.77  E-value=2.7e-17  Score=141.49  Aligned_cols=178  Identities=13%  Similarity=0.001  Sum_probs=128.6

Q ss_pred             CCCCCCcHHHH--HHHHHHHhcCCeEEEEecCcc--h-------------hHHHHHhh------hcccCCCHHHHHHHHH
Q psy7994           1 VTGANKGIGYG--IVKGLIQQFDGIIYLTARDAS--R-------------GQEALEKL------QKLDILDKNSIKALHD   57 (230)
Q Consensus         1 ItG~s~giG~~--~a~~la~~g~~~vi~~~r~~~--~-------------~~~~~~~~------~~~D~s~~~~v~~~~~   57 (230)
                      |||+++|||.+  +|+.| ++|+ .++++++..+  .             .....+..      ..||++++++++++++
T Consensus        46 VTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie  123 (398)
T PRK13656         46 VIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIE  123 (398)
T ss_pred             EECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            79999999999  89999 8854 4445553221  1             12222221      1289999999999999


Q ss_pred             HHHhhcCCCcEEEEccCCccccC-----------------CC-----------------CCChhHHHHHHHHhhhhH---
Q psy7994          58 HLEAEHGGVDVLVNNAAIAFKVN-----------------SS-----------------EPFGSQALHTMRTNYFAL---  100 (230)
Q Consensus        58 ~~~~~~~~id~lv~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n~~g~---  100 (230)
                      ++.+.+|+||+||||+|......                 +.                 ..+.++++.++++.-.-.   
T Consensus       124 ~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMggedw~~  203 (398)
T PRK13656        124 LIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGGEDWEL  203 (398)
T ss_pred             HHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhccchHHH
Confidence            99999999999999999873211                 10                 133455555555544422   


Q ss_pred             HHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHH
Q psy7994         101 IDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKL  180 (230)
Q Consensus       101 ~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  180 (230)
                      |.=++...++|.+++++|.+|..++...                                      .+......-+.+|+
T Consensus       204 Wi~al~~a~lla~g~~~va~TY~G~~~t--------------------------------------~p~Y~~g~mG~AKa  245 (398)
T PRK13656        204 WIDALDEAGVLAEGAKTVAYSYIGPELT--------------------------------------HPIYWDGTIGKAKK  245 (398)
T ss_pred             HHHHHHhcccccCCcEEEEEecCCccee--------------------------------------ecccCCchHHHHHH
Confidence            2224555678888999999999887331                                      11222247799999


Q ss_pred             HHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCC
Q psy7994         181 GVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP  222 (230)
Q Consensus       181 a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~  222 (230)
                      +|+..++.|+.+|++.    |+|+|++.+|++.|.-+..++.
T Consensus       246 ~LE~~~r~La~~L~~~----giran~i~~g~~~T~Ass~Ip~  283 (398)
T PRK13656        246 DLDRTALALNEKLAAK----GGDAYVSVLKAVVTQASSAIPV  283 (398)
T ss_pred             HHHHHHHHHHHHhhhc----CCEEEEEecCcccchhhhcCCC
Confidence            9999999999999997    7889999999999998877654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.72  E-value=2.8e-16  Score=135.93  Aligned_cols=177  Identities=17%  Similarity=0.079  Sum_probs=125.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH------h--hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE------K--LQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~------~--~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|+||+++++.|+++ ++.|+.++|+.........      .  +..+|+++.+++..++++.     ++|+|||+
T Consensus         9 ItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~   82 (349)
T TIGR02622         9 VTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHL   82 (349)
T ss_pred             EECCCChhHHHHHHHHHHC-CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CCCEEEEC
Confidence            7999999999999999999 5567777777654332211      1  1238999999999998864     69999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      |+...    ...+.+++...+++|+.+++.+++++.+ +...+++|++||...+..+...                    
T Consensus        83 A~~~~----~~~~~~~~~~~~~~N~~g~~~ll~a~~~-~~~~~~iv~~SS~~vyg~~~~~--------------------  137 (349)
T TIGR02622        83 AAQPL----VRKSYADPLETFETNVMGTVNLLEAIRA-IGSVKAVVNVTSDKCYRNDEWV--------------------  137 (349)
T ss_pred             Ccccc----cccchhCHHHHHHHhHHHHHHHHHHHHh-cCCCCEEEEEechhhhCCCCCC--------------------
Confidence            99632    2334456778999999999999998853 2224699999997654321000                    


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                              ...++..+..|..+|+.+|.+.+.+++.++.++.......|++++++.|+.+-.+.
T Consensus       138 --------~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       138 --------WGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             --------CCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence                    00011223345689999999999999998887754211126889999999887653

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.68  E-value=7.9e-16  Score=138.69  Aligned_cols=157  Identities=18%  Similarity=0.183  Sum_probs=117.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh------------------hhcccCCCHHHHHHHHHHHHhh
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK------------------LQKLDILDKNSIKALHDHLEAE   62 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~------------------~~~~D~s~~~~v~~~~~~~~~~   62 (230)
                      ||||+|+||++++++|+++ ++.|+++.|+.++++...+.                  +..+|++|.+++.+.+      
T Consensus        85 VTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL------  157 (576)
T PLN03209         85 VAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL------  157 (576)
T ss_pred             EECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh------
Confidence            7999999999999999999 56788889988877654332                  2238999998876543      


Q ss_pred             cCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          63 HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        63 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                       +++|+||||+|....      ....+...+++|+.|...+++++.+.  ..++||++||.++...              
T Consensus       158 -ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~a--gVgRIV~VSSiga~~~--------------  214 (576)
T PLN03209        158 -GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATVA--KVNHFILVTSLGTNKV--------------  214 (576)
T ss_pred             -cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHHh--CCCEEEEEccchhccc--------------
Confidence             589999999997521      11246778999999999999988642  3479999999876210              


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                               +. +...|. +|.++..+.+....++...    ||+++.|.||++.|++..
T Consensus       215 -------------------------g~-p~~~~~-sk~~~~~~KraaE~~L~~s----GIrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        215 -------------------------GF-PAAILN-LFWGVLCWKRKAEEALIAS----GLPYTIVRPGGMERPTDA  259 (576)
T ss_pred             -------------------------Cc-cccchh-hHHHHHHHHHHHHHHHHHc----CCCEEEEECCeecCCccc
Confidence                                     00 012243 6777777777777778776    788999999999887643

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.68  E-value=4.9e-16  Score=133.85  Aligned_cols=171  Identities=18%  Similarity=0.045  Sum_probs=119.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-----hHHHHH---------hhhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-----GQEALE---------KLQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-----~~~~~~---------~~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|+||.+++++|+++ +..|++++|..+.     ++....         .+..+|++|.+++..+++++     ++
T Consensus        11 VTGatGfiG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   84 (340)
T PLN02653         11 ITGITGQDGSYLTEFLLSK-GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-----KP   84 (340)
T ss_pred             EECCCCccHHHHHHHHHHC-CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc-----CC
Confidence            7999999999999999999 4567666665432     222211         12238999999999998875     69


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCc---eEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHG---RVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g---~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      |+|||+|+.....    ...+.....+++|+.|+..+++++.+...+++   ++|++||...+.....            
T Consensus        85 d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~------------  148 (340)
T PLN02653         85 DEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP------------  148 (340)
T ss_pred             CEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC------------
Confidence            9999999975321    22344577889999999999999988765444   7888887644332110            


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV  212 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v  212 (230)
                                        ..++..+..|...|+.||.+.+.++++++.++...... ++.++.+.|+..
T Consensus       149 ------------------~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~-~~~~~~~gp~~~  198 (340)
T PLN02653        149 ------------------PQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACN-GILFNHESPRRG  198 (340)
T ss_pred             ------------------CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEE-eeeccccCCCCC
Confidence                              01223344566899999999999999998877543222 455677777643

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.66  E-value=3.3e-15  Score=127.85  Aligned_cols=171  Identities=22%  Similarity=0.156  Sum_probs=119.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH-----------hhhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-----------KLQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~-----------~~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||++++++|+++ +..|+++.|+....+....           .+..+|++++++++++++       ++|+|
T Consensus        10 VtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v   81 (325)
T PLN02989         10 VTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------GCETV   81 (325)
T ss_pred             EECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------CCCEE
Confidence            7999999999999999999 4567777777654433211           112379999999888875       58999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccch--HHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTS--EALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~--~~~~~~~~~~~~~~~  147 (230)
                      |||||...    ...+.+.+.+.+++|+.+++.+++++.+.+. .++||++||..+++.+...  +.       ..    
T Consensus        82 ih~A~~~~----~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~-------~~----  145 (325)
T PLN02989         82 FHTASPVA----ITVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETKLGPN-------DV----  145 (325)
T ss_pred             EEeCCCCC----CCCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCccCCCC-------Cc----
Confidence            99999642    1234456788999999999999999977542 4699999998775532110  00       00    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCC------CCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGG------WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                     .++..+.      .+...|+.||.+.+.+++.++.+.       |+.++.+.|+.+-.+..
T Consensus       146 ---------------~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilR~~~vyGp~~  199 (325)
T PLN02989        146 ---------------VDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN-------EIDLIVLNPGLVTGPIL  199 (325)
T ss_pred             ---------------cCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc-------CCeEEEEcCCceeCCCC
Confidence                           0011111      123679999999999887775543       35588889988877654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.66  E-value=1.4e-15  Score=131.22  Aligned_cols=170  Identities=18%  Similarity=0.094  Sum_probs=116.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-----hHHHHH----------hhhcccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-----GQEALE----------KLQKLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-----~~~~~~----------~~~~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||+|+||.+++++|+++ +..|+.++|..+.     +....+          .+..+|++|.+++.++++..     +
T Consensus         5 VTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~   78 (343)
T TIGR01472         5 ITGITGQDGSYLAEFLLEK-GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-----K   78 (343)
T ss_pred             EEcCCCcHHHHHHHHHHHC-CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-----C
Confidence            7999999999999999999 4567777776432     222211          12238999999999999864     6


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccc-ccCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL-LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~-l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +|+|||+|+.....    ...+.....+++|+.|+..+++++.+. +++..++|++||...+......            
T Consensus        79 ~d~ViH~Aa~~~~~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~------------  142 (343)
T TIGR01472        79 PTEIYNLAAQSHVK----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI------------  142 (343)
T ss_pred             CCEEEECCcccccc----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC------------
Confidence            89999999975321    122234567889999999999998763 3333589999997654321100            


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPG  210 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG  210 (230)
                                       ..++..+..|..+|+.||.+.+.+++.++.++...... ++.++...|+
T Consensus       143 -----------------~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~-~~~~~~~gp~  190 (343)
T TIGR01472       143 -----------------PQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVN-GILFNHESPR  190 (343)
T ss_pred             -----------------CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEE-EeecccCCCC
Confidence                             01123344566899999999999999998876443221 2344555565

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK06720 hypothetical protein; Provisional

Probab=99.63  E-value=4e-15  Score=116.03  Aligned_cols=123  Identities=16%  Similarity=0.109  Sum_probs=95.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||.++++.|+++ +..|++++|+.+.++...+++.         .+|+++.++++++++++.+.++++|++||
T Consensus        21 VTGa~~GIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVn   99 (169)
T PRK06720         21 VTGGGIGIGRNTALLLAKQ-GAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQ   99 (169)
T ss_pred             EecCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5678888888776665544432         38999999999999999999999999999


Q ss_pred             ccCCccccC-CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---------CceEEEecCCCccc
Q psy7994          72 NAAIAFKVN-SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---------HGRVVNVSSSCGHL  127 (230)
Q Consensus        72 ~ag~~~~~~-~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---------~g~ii~~sS~~~~~  127 (230)
                      |||.....+ +.+.+++. ++  .+|+.+.+..++.+.+.|++         .||+-.+|+.+..+
T Consensus       100 nAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720        100 NAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             CCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            999876433 44434444 33  67777778888888877643         36888888877643

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.62  E-value=7.2e-15  Score=121.28  Aligned_cols=154  Identities=19%  Similarity=0.163  Sum_probs=120.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|.||++.+.+|++.|..+|++..-.....+....   .+.+.|+.|.+.+.+++++.     ++|.|||.||.. 
T Consensus         5 VtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-----~idaViHFAa~~-   78 (329)
T COG1087           5 VTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-----KIDAVVHFAASI-   78 (329)
T ss_pred             EecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc-----CCCEEEECcccc-
Confidence            799999999999999999977777777666666555543   55669999999999999975     899999999986 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                         ....+.+...+.++-|+.|++.|++++...  .-..|||-||.+.+..|...|.                       
T Consensus        79 ---~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~--gv~~~vFSStAavYG~p~~~PI-----------------------  130 (329)
T COG1087          79 ---SVGESVQNPLKYYDNNVVGTLNLIEAMLQT--GVKKFIFSSTAAVYGEPTTSPI-----------------------  130 (329)
T ss_pred             ---ccchhhhCHHHHHhhchHhHHHHHHHHHHh--CCCEEEEecchhhcCCCCCccc-----------------------
Confidence               334666778899999999999999988421  1247777777666766654432                       


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~  194 (230)
                            ++.-+..|..+|+.||..++.+.+.+++...
T Consensus       131 ------~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         131 ------SETSPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             ------CCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence                  2233555779999999999999998887655

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.62  E-value=1.5e-14  Score=125.23  Aligned_cols=159  Identities=15%  Similarity=0.082  Sum_probs=109.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch--hHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR--GQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~--~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||.++++.|.++|...+++.++....  ......       .+..+|++|.+++++++++.     ++|+|||
T Consensus         6 VtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih   80 (355)
T PRK10217          6 ITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPDCVMH   80 (355)
T ss_pred             EEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCCEEEE
Confidence            799999999999999999976666666654321  111111       12248999999999888752     6999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc------C-CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR------S-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~------~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +||....    ..+.+.++..+++|+.+++.+++++.+.|.      + ..++|++||.+.+.......           
T Consensus        81 ~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~-----------  145 (355)
T PRK10217         81 LAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD-----------  145 (355)
T ss_pred             CCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC-----------
Confidence            9997521    233456788999999999999999976531      1 24899999865432110000           


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhh
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQ  195 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~  195 (230)
                                      ...++..+..|...|+.||.+.+.+++.++.++..
T Consensus       146 ----------------~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~  180 (355)
T PRK10217        146 ----------------DFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL  180 (355)
T ss_pred             ----------------CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCC
Confidence                            00011223445689999999999999988776543

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.58  E-value=6.5e-14  Score=120.56  Aligned_cols=178  Identities=20%  Similarity=0.154  Sum_probs=114.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH--H--------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL--E--------KLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~--~--------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||++++++|+++| ..|+++.|+.+......  .        .+..+|++|.+++.++++       ++|+||
T Consensus        14 ItG~~GfIG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   85 (338)
T PLN00198         14 VIGGTGFLASLLIKLLLQKG-YAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------GCDLVF   85 (338)
T ss_pred             EECCchHHHHHHHHHHHHCC-CEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------cCCEEE
Confidence            79999999999999999995 56777777654432211  1        122479999998887765       589999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccch-HHHHHHhhhhchhHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTS-EALKKKLLHEIKSVEEL  149 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~-~~~~~~~~~~~~~~~~~  149 (230)
                      |+|+...   .  ...+.+...+++|+.|+..+++++.+.. ..+++|++||.+.+...... +..   ...+. .+...
T Consensus        86 h~A~~~~---~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~~~~~~---~~~E~-~~~~~  155 (338)
T PLN00198         86 HVATPVN---F--ASEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKLSGTGL---VMNEK-NWTDV  155 (338)
T ss_pred             EeCCCCc---c--CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCCCCCCc---eeccc-cCCch
Confidence            9998531   1  1223456678999999999999986531 23699999998765421100 000   00000 00000


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                           .+        ......|..+|+.||.+.+.+++.++..+       |+.+..+.|+.+-.+.
T Consensus       156 -----~~--------~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        156 -----EF--------LTSEKPPTWGYPASKTLAEKAAWKFAEEN-------NIDLITVIPTLMAGPS  202 (338)
T ss_pred             -----hh--------hhhcCCccchhHHHHHHHHHHHHHHHHhc-------CceEEEEeCCceECCC
Confidence                 00        00012345789999999999988876653       3557778887776653

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.57  E-value=7.4e-14  Score=120.74  Aligned_cols=168  Identities=14%  Similarity=0.067  Sum_probs=109.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc--chhHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA--SRGQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~--~~~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||.+++++|+++|...|+..++..  ...+....       .+..+|++|.+++.+++++.     ++|+|||
T Consensus         5 ITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih   79 (352)
T PRK10084          5 VTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-----QPDAVMH   79 (352)
T ss_pred             EECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CCCEEEE
Confidence            7999999999999999999766666555432  12222211       12348999999999988753     7999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-------CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-------HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-------~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +|+.....    ...+..+..+++|+.|+..+++++.+.|++       ..++|++||...+...............++ 
T Consensus        80 ~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~-  154 (352)
T PRK10084         80 LAAESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPL-  154 (352)
T ss_pred             CCcccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCC-
Confidence            99975321    122345678999999999999999876531       248999998765432100000000000000 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                                        -++..+..|...|+.||.+.+.+++.++.++...
T Consensus       155 ------------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~  188 (352)
T PRK10084        155 ------------------FTETTAYAPSSPYSASKASSDHLVRAWLRTYGLP  188 (352)
T ss_pred             ------------------ccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCC
Confidence                              0112234456899999999999999988776543

>PLN02650 dihydroflavonol-4-reductase

Probab=99.55  E-value=1.5e-13  Score=118.86  Aligned_cols=177  Identities=18%  Similarity=0.097  Sum_probs=116.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-----------hhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-----------LQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-----------~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|.||.+++++|+++ +..|++++|+.+........           +..+|+++.+.++.+++       .+|+|
T Consensus        10 VTGatGfIGs~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------~~d~V   81 (351)
T PLN02650         10 VTGASGFIGSWLVMRLLER-GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------GCTGV   81 (351)
T ss_pred             EeCCcHHHHHHHHHHHHHC-CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------CCCEE
Confidence            7999999999999999999 55777777776554432211           12379999998887775       58999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccch-HHHHHHhhhhchhHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTS-EALKKKLLHEIKSVEE  148 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~-~~~~~~~~~~~~~~~~  148 (230)
                      ||+|+...   .  ...+.++..+++|+.+++.+++++.+.. ...+||++||...++..... +.     ..+. .+..
T Consensus        82 iH~A~~~~---~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~~~~~~~-----~~E~-~~~~  149 (351)
T PLN02650         82 FHVATPMD---F--ESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVEEHQKPV-----YDED-CWSD  149 (351)
T ss_pred             EEeCCCCC---C--CCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccCCCCCCc-----cCcc-cCCc
Confidence            99998642   1  1123346789999999999999987532 12589999998654321100 00     0000 0000


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                      .+     +        ......+..+|+.||.+.+.+++.++.++       |++++.+.|+.+-++..
T Consensus       150 ~~-----~--------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        150 LD-----F--------CRRKKMTGWMYFVSKTLAEKAAWKYAAEN-------GLDFISIIPTLVVGPFI  198 (351)
T ss_pred             hh-----h--------hhccccccchHHHHHHHHHHHHHHHHHHc-------CCeEEEECCCceECCCC
Confidence            00     0        00011123589999999999998876652       46799999998887753

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.55  E-value=2.5e-13  Score=117.66  Aligned_cols=185  Identities=19%  Similarity=0.099  Sum_probs=115.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh--------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK--------LQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~--------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|+||.+++++|+++ +..|++++|+..+.+.....        +..+|+++.+++.++++       .+|+|||+
T Consensus        15 VtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~   86 (353)
T PLN02896         15 VTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------GCDGVFHV   86 (353)
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------CCCEEEEC
Confidence            7999999999999999999 55777777876655443322        22389999999888764       58999999


Q ss_pred             cCCccccC-CCCCChhHH--HHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          73 AAIAFKVN-SSEPFGSQA--LHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        73 ag~~~~~~-~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+...... ....+.+.+  ..+++.|+.|++.+++++.+.. ..++||++||.+.+.......     ....+. .|..
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~-----~~~~~~-~E~~  159 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNG-----RWRAVV-DETC  159 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCC-----CCCCcc-Cccc
Confidence            99754321 111223332  4577888999999999986532 235899999987654211000     000000 0000


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                      ......         ...+..+..+|+.||.+.+.+++.++...       |+.+..+.|+.+-.+.
T Consensus       160 ~~p~~~---------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lR~~~vyGp~  210 (353)
T PLN02896        160 QTPIDH---------VWNTKASGWVYVLSKLLTEEAAFKYAKEN-------GIDLVSVITTTVAGPF  210 (353)
T ss_pred             CCcHHH---------hhccCCCCccHHHHHHHHHHHHHHHHHHc-------CCeEEEEcCCcccCCC
Confidence            000000         00011234589999999999987766544       3557788887665553

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.55  E-value=1.8e-13  Score=116.97  Aligned_cols=172  Identities=20%  Similarity=0.211  Sum_probs=114.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH-----------hhhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-----------KLQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~-----------~~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||++++++|+++ +..|+++.|+....+....           .+..+|+++++.+.++++       .+|+|
T Consensus        10 VTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   81 (322)
T PLN02986         10 VTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------GCDAV   81 (322)
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------CCCEE
Confidence            7999999999999999999 4567777777654332111           112389999998888876       58999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccc-cccc-hHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHL-CHVT-SEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~-~~~~-~~~~~~~~~~~~~~~~  147 (230)
                      ||+|+....     ...+...+.+++|+.|+..+++++... ..-.+||++||.+++. .... .+.       ..    
T Consensus        82 ih~A~~~~~-----~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~~~~~~~~~~-------~~----  144 (322)
T PLN02986         82 FHTASPVFF-----TVKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVLFRQPPIEAN-------DV----  144 (322)
T ss_pred             EEeCCCcCC-----CCCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhheecCCccCCCC-------CC----
Confidence            999997421     112334568999999999999987532 1125999999987632 1100 000       00    


Q ss_pred             HHHHHHHHHHHHhhcCCCc-CC---CCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         148 ELSALMNEFVELAQDGSHT-KG---GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~-~~---~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                   .+++.. .+   ..+...|+.||.+.+.+++.+.++.       |+.++.+.|+.+-++..
T Consensus       145 -------------~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~-------~~~~~~lrp~~v~Gp~~  198 (322)
T PLN02986        145 -------------VDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN-------GIDMVVLNPGFICGPLL  198 (322)
T ss_pred             -------------cCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh-------CCeEEEEcccceeCCCC
Confidence                         000000 00   0123679999999888887665543       46689999999987754

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.55  E-value=1.9e-13  Score=115.84  Aligned_cols=169  Identities=17%  Similarity=0.081  Sum_probs=114.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcc-----hhHHHHH----hhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDAS-----RGQEALE----KLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~-----~~~~~~~----~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||.+++++|+++|. ..|++.+|...     .++....    ++..+|++|++++.++++..     ++|+||
T Consensus         4 ItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi   78 (317)
T TIGR01181         4 VTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPDAVV   78 (317)
T ss_pred             EEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCCEEE
Confidence            799999999999999999863 56777665321     1111111    12238999999999888753     699999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+|+....    +.+.+.++..+++|+.++..+++++.+.+. +.++|++||...+.......                 
T Consensus        79 ~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v~g~~~~~~-----------------  136 (317)
T TIGR01181        79 HFAAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEVYGDLEKGD-----------------  136 (317)
T ss_pred             EcccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccceeCCCCCCC-----------------
Confidence            99997531    233455678899999999999998865433 34799999865432111000                 


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                 ..++..+..+...|+.+|.+.+.+++.++.+.+       +++..+.|+.+-.
T Consensus       137 -----------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-------~~~~i~R~~~i~G  182 (317)
T TIGR01181       137 -----------AFTETTPLAPSSPYSASKAASDHLVRAYHRTYG-------LPALITRCSNNYG  182 (317)
T ss_pred             -----------CcCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC-------CCeEEEEeccccC
Confidence                       001122334557899999999999988766543       3466677775543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.53  E-value=1.3e-13  Score=122.98  Aligned_cols=184  Identities=13%  Similarity=0.019  Sum_probs=113.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC---c-c----------------hhHHHH------HhhhcccCCCHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD---A-S----------------RGQEAL------EKLQKLDILDKNSIKA   54 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~---~-~----------------~~~~~~------~~~~~~D~s~~~~v~~   54 (230)
                      ||||+|+||++++++|+++| ..|+++++.   . +                .++...      -++..+|++|.+.+++
T Consensus        52 VTGatGfIGs~Lv~~L~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~  130 (442)
T PLN02572         52 VIGGDGYCGWATALHLSKRG-YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSE  130 (442)
T ss_pred             EECCCcHHHHHHHHHHHHCC-CeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHH
Confidence            79999999999999999995 456655421   1 1                011000      0122489999999999


Q ss_pred             HHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHH
Q psy7994          55 LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        55 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      ++++.     ++|+|||+|+... ......+++.++..+++|+.|++.+++++...- ...++|++||...+..+... .
T Consensus       131 ~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~~~-~  202 (442)
T PLN02572        131 AFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPNID-I  202 (442)
T ss_pred             HHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCCCC-C
Confidence            98864     6999999997632 222233445677889999999999999885421 12489999998765432100 0


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                            .+.        ... .......++...+..|...|+.||.+.+.+++.++..++       +.+..+.|+.+-.
T Consensus       203 ------~E~--------~i~-~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~g-------l~~v~lR~~~vyG  260 (442)
T PLN02572        203 ------EEG--------YIT-ITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-------IRATDLNQGVVYG  260 (442)
T ss_pred             ------ccc--------ccc-cccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcC-------CCEEEEecccccC
Confidence                  000        000 000000000001334557899999999999887766543       4466666666644


Q ss_pred             C
Q psy7994         215 D  215 (230)
Q Consensus       215 ~  215 (230)
                      +
T Consensus       261 p  261 (442)
T PLN02572        261 V  261 (442)
T ss_pred             C
Confidence            4

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.52  E-value=2.2e-13  Score=114.51  Aligned_cols=178  Identities=20%  Similarity=0.149  Sum_probs=121.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhH-HHHHh-----hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQ-EALEK-----LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~-~~~~~-----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||+|.||.+++++|.++|. ..|...++.+.... .....     +..+|++|.+++.++++       ..|+|||+|
T Consensus         2 VTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~-------g~d~V~H~A   74 (280)
T PF01073_consen    2 VTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALE-------GVDVVFHTA   74 (280)
T ss_pred             EEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhc-------CCceEEEeC
Confidence            799999999999999999963 56666666554322 11111     34599999999999887       789999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      +......     ....+.++++|+.|+-.+++++...  .-.++|++||......+.....        +          
T Consensus        75 a~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~~~~~~--------~----------  129 (280)
T PF01073_consen   75 APVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDNYKGDP--------I----------  129 (280)
T ss_pred             ccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEeccCCCC--------c----------
Confidence            9753221     3456789999999999999998631  2369999999988654211100        0          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHH-hhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHA-LLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~-~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                           ...+++..++..+...|+.||+.-+.+...... .+..  .+ .++..+|.|..|-.+...
T Consensus       130 -----~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~--g~-~l~t~~lRP~~IyGp~d~  187 (280)
T PF01073_consen  130 -----INGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKN--GG-RLRTCALRPAGIYGPGDQ  187 (280)
T ss_pred             -----ccCCcCCcccccccCchHHHHHHHHHHHHhhccccccc--cc-ceeEEEEeccEEeCcccc
Confidence                 011222223333568999999999988754333 1111  11 388889999988776543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02214 cinnamoyl-CoA reductase

Probab=99.52  E-value=2.5e-13  Score=117.31  Aligned_cols=166  Identities=20%  Similarity=0.113  Sum_probs=113.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH-HHh---------hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA-LEK---------LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~-~~~---------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||++++++|+++ +..|+.+.|+.+..... ...         +..+|++|++++.++++       ++|+||
T Consensus        15 VTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vi   86 (342)
T PLN02214         15 VTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------GCDGVF   86 (342)
T ss_pred             EECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------cCCEEE
Confidence            7999999999999999999 55777777876542211 111         22379999999888875       589999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccc-cchHHHHHHhhhhchhHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCH-VTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~-~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |+|+...         +.+.+.+++|+.|+..+++++.+.  ..++||++||..+.+.. ...+.       ...     
T Consensus        87 h~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~--~v~r~V~~SS~~avyg~~~~~~~-------~~~-----  143 (342)
T PLN02214         87 HTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA--KVKRVVITSSIGAVYMDPNRDPE-------AVV-----  143 (342)
T ss_pred             EecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeccceeeeccCCCCCC-------ccc-----
Confidence            9999631         246788999999999999998642  22589999997664421 10000       000     


Q ss_pred             HHHHHHHHHHhhcCCCc----CCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         150 SALMNEFVELAQDGSHT----KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~----~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                  +++.+    .+..+...|+.||.+.+.+++.++.+.       |+.+..+.|+.+-.+.
T Consensus       144 ------------~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~-------g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        144 ------------DESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK-------GVDLVVLNPVLVLGPP  195 (342)
T ss_pred             ------------CcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc-------CCcEEEEeCCceECCC
Confidence                        00000    011234689999999999987776554       3558888888876553

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.52  E-value=4e-14  Score=118.07  Aligned_cols=152  Identities=22%  Similarity=0.252  Sum_probs=109.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------------cccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------------KLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------------~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||+|-||++++++|++.+...|++.++++..+-....++.               -+|++|.+.++.++++.     +
T Consensus         3 VTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-----~   77 (293)
T PF02719_consen    3 VTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-----K   77 (293)
T ss_dssp             EETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-------T
T ss_pred             EEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-----C
Confidence            799999999999999999988899999999998877766663               16999999999999865     8


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      +|+|+|.|+.-.-.    .-++...+.+++|+.|+.++++++...  .-.++|++|+.-+                    
T Consensus        78 pdiVfHaAA~KhVp----l~E~~p~eav~tNv~GT~nv~~aa~~~--~v~~~v~ISTDKA--------------------  131 (293)
T PF02719_consen   78 PDIVFHAAALKHVP----LMEDNPFEAVKTNVLGTQNVAEAAIEH--GVERFVFISTDKA--------------------  131 (293)
T ss_dssp             -SEEEE------HH----HHCCCHHHHHHHHCHHHHHHHHHHHHT--T-SEEEEEEECGC--------------------
T ss_pred             CCEEEEChhcCCCC----hHHhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEcccccc--------------------
Confidence            99999999985321    222456788999999999999999642  3369999998655                    


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPG  210 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG  210 (230)
                                             ..|...||+||...+.++.+++......    +.++.+|-=|
T Consensus       132 -----------------------v~PtnvmGatKrlaE~l~~~~~~~~~~~----~t~f~~VRFG  169 (293)
T PF02719_consen  132 -----------------------VNPTNVMGATKRLAEKLVQAANQYSGNS----DTKFSSVRFG  169 (293)
T ss_dssp             -----------------------SS--SHHHHHHHHHHHHHHHHCCTSSSS------EEEEEEE-
T ss_pred             -----------------------CCCCcHHHHHHHHHHHHHHHHhhhCCCC----CcEEEEEEec
Confidence                                   2245899999999999998877766333    2445555433

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.51  E-value=5.8e-13  Score=112.85  Aligned_cols=172  Identities=15%  Similarity=0.008  Sum_probs=112.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc--hhHHHHHh---------hhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS--RGQEALEK---------LQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~--~~~~~~~~---------~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||++++++|+++ ++.|+++.|+.+  ........         +..+|++|.+++..++.       ..|.+
T Consensus        11 VTGatG~IG~~lv~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------~~d~v   82 (297)
T PLN02583         11 VMDASGYVGFWLVKRLLSR-GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------GCSGL   82 (297)
T ss_pred             EECCCCHHHHHHHHHHHhC-CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            7999999999999999999 557777777532  22222222         12379999998876654       68899


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccc-cccchHHHHHHhhhhchhHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHL-CHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~-~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      +|.++....     .. ..+++++++|+.|++.+++++.+.+ ..++||++||..+.. .+....      ...+.    
T Consensus        83 ~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~~~~~~~~------~~~~~----  145 (297)
T PLN02583         83 FCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVIWRDDNIS------TQKDV----  145 (297)
T ss_pred             EEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHheecccccCC------CCCCC----
Confidence            987654311     11 2467899999999999999998654 236999999987743 111000      00000    


Q ss_pred             HHHHHHHHHHHhhcCCCcC----CCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTK----GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                   +++...    .......|+.||...+.++..++..   .    |+.+++|.|+.+-.+..
T Consensus       146 -------------~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~----gi~~v~lrp~~v~Gp~~  198 (297)
T PLN02583        146 -------------DERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---R----GVNMVSINAGLLMGPSL  198 (297)
T ss_pred             -------------CcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---h----CCcEEEEcCCcccCCCC
Confidence                         000000    0001136999999999888666543   2    57799999999987754

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.50  E-value=4.1e-13  Score=114.03  Aligned_cols=152  Identities=18%  Similarity=0.102  Sum_probs=100.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHh--hcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEA--EHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~--~~~~id~lv~~ag~~~~   78 (230)
                      ||||+|.||++++++|+++|...|++.++... ... ...+.++|+.|..+.+.+++++.+  .++++|+|||+|+....
T Consensus         4 VtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~-~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~   81 (308)
T PRK11150          4 VTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTK-FVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSST   81 (308)
T ss_pred             EecCCcHHHHHHHHHHHhCCCceEEEecCCCc-chH-HHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCC
Confidence            79999999999999999995545555544322 211 122344788777776666666543  34589999999986432


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      .   ..+   ....++.|+.++..+++++..   .+.++|++||...+..+...                          
T Consensus        82 ~---~~~---~~~~~~~n~~~t~~ll~~~~~---~~~~~i~~SS~~vyg~~~~~--------------------------  126 (308)
T PRK11150         82 T---EWD---GKYMMDNNYQYSKELLHYCLE---REIPFLYASSAATYGGRTDD--------------------------  126 (308)
T ss_pred             c---CCC---hHHHHHHHHHHHHHHHHHHHH---cCCcEEEEcchHHhCcCCCC--------------------------
Confidence            1   111   235789999999999998854   23479999998654422100                          


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHh
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHAL  192 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~  192 (230)
                         ..++..+..|...|+.+|.+.+.+++.++.+
T Consensus       127 ---~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  157 (308)
T PRK11150        127 ---FIEEREYEKPLNVYGYSKFLFDEYVRQILPE  157 (308)
T ss_pred             ---CCccCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence               0011223345578999999999988776544

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.50  E-value=5.3e-13  Score=109.94  Aligned_cols=159  Identities=16%  Similarity=0.069  Sum_probs=115.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEec-C-cchhHHHHHh-------hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTAR-D-ASRGQEALEK-------LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r-~-~~~~~~~~~~-------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|.||...++.+.++... .|+.++. + ...++.....       +.+.|+.|.+.+.+++++-     ++|+||
T Consensus         5 VTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~D~Vv   79 (340)
T COG1088           5 VTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QPDAVV   79 (340)
T ss_pred             EecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CCCeEE
Confidence            7999999999999999998654 3565554 2 2333333222       3348999999999999864     799999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |-|.-+.    .+-+.+.....+++|+.|++.+++++..+..+ -+++.+|.-..+..-...                  
T Consensus        80 hfAAESH----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l~~~------------------  136 (340)
T COG1088          80 HFAAESH----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDLGLD------------------  136 (340)
T ss_pred             Eechhcc----ccccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccccCC------------------
Confidence            9999864    23444556678899999999999999654432 379999987664421100                  


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                               ...-++..+..|.++|++||++-..|++++.+.++..
T Consensus       137 ---------~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp  173 (340)
T COG1088         137 ---------DDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLP  173 (340)
T ss_pred             ---------CCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCc
Confidence                     0001245677888999999999999999998887765

>PLN02240 UDP-glucose 4-epimerase

Probab=99.50  E-value=5.7e-13  Score=115.11  Aligned_cols=151  Identities=17%  Similarity=0.117  Sum_probs=104.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchh----HHHHH---------hhhcccCCCHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRG----QEALE---------KLQKLDILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~----~~~~~---------~~~~~D~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      ||||+|+||.+++++|+++| ..|++.+|.....    .....         .+..+|++|++++..++++.     ++|
T Consensus        10 ItGatG~iG~~l~~~L~~~g-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-----~~d   83 (352)
T PLN02240         10 VTGGAGYIGSHTVLQLLLAG-YKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-----RFD   83 (352)
T ss_pred             EECCCChHHHHHHHHHHHCC-CEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-----CCC
Confidence            79999999999999999995 5676666543211    11111         12238999999999888753     799


Q ss_pred             EEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      +|||+|+....    ..+.+.+...+++|+.++..+++++..  .+..++|++||...+..+...               
T Consensus        84 ~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~vyg~~~~~---------------  142 (352)
T PLN02240         84 AVIHFAGLKAV----GESVAKPLLYYDNNLVGTINLLEVMAK--HGCKKLVFSSSATVYGQPEEV---------------  142 (352)
T ss_pred             EEEEccccCCc----cccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEccHHHhCCCCCC---------------
Confidence            99999997421    123356778999999999999997742  123589999996443211100               


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHh
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHAL  192 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~  192 (230)
                                    .-++..+..+...|+.+|.+.+.+++.++..
T Consensus       143 --------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  173 (352)
T PLN02240        143 --------------PCTEEFPLSATNPYGRTKLFIEEICRDIHAS  173 (352)
T ss_pred             --------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence                          0112234445689999999999999887654

>KOG1502|consensus

Probab=99.49  E-value=8.8e-13  Score=111.17  Aligned_cols=177  Identities=23%  Similarity=0.135  Sum_probs=119.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHH--HHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQE--ALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~--~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||||.||..|+++|+++ |+.|..+.|++++.+.  .+.+++         ..|++|+++....++       +.|+|
T Consensus        11 VTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------gcdgV   82 (327)
T KOG1502|consen   11 VTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------GCDGV   82 (327)
T ss_pred             EeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------CCCEE
Confidence            7999999999999999999 6689999998876333  233333         289999999999987       79999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccc-cchH--HHHHHhhhhchhH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCH-VTSE--ALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~-~~~~--~~~~~~~~~~~~~  146 (230)
                      +|.|.......   .+  .-.+.++..+.|+..+++++...- .-.|||++||.++...+ ....  ..-++..|-..++
T Consensus        83 fH~Asp~~~~~---~~--~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~  156 (327)
T KOG1502|consen   83 FHTASPVDFDL---ED--PEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDF  156 (327)
T ss_pred             EEeCccCCCCC---CC--cHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccCCcCCCCCcccccccCCcHHH
Confidence            99998753211   11  234789999999999999996422 23699999999996543 1110  0000000000000


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                         -.-                  ...-|+.||.    ++.--|.+|+.+   +++.+.+|+|+.|-.|....
T Consensus       157 ---~~~------------------~~~~Y~~sK~----lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  157 ---CRC------------------KKLWYALSKT----LAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             ---HHh------------------hHHHHHHHHH----HHHHHHHHHHHh---CCccEEEecCCceECCCccc
Confidence               000                  0035777776    334444566665   25779999999998887655

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.48  E-value=1.2e-12  Score=112.53  Aligned_cols=152  Identities=14%  Similarity=0.076  Sum_probs=102.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH---HHh-------hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA---LEK-------LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~---~~~-------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||+++++.|+++| ..|++.+|........   ...       +..+|++|.+.+..+++.     .++|+||
T Consensus         5 VtGatG~iG~~l~~~L~~~g-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vv   78 (338)
T PRK10675          5 VTGGSGYIGSHTCVQLLQNG-HDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDTVI   78 (338)
T ss_pred             EECCCChHHHHHHHHHHHCC-CeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCEEE
Confidence            79999999999999999995 5566565532222111   111       223899999998888764     3799999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+||.....    ...+.....+++|+.++..+++++...  ..+++|++||...+......                  
T Consensus        79 h~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~yg~~~~~------------------  134 (338)
T PRK10675         79 HFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNLIFSSSATVYGDQPKI------------------  134 (338)
T ss_pred             ECCcccccc----chhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhhCCCCCC------------------
Confidence            999975321    122335568899999999999977431  23589999997543211100                  


Q ss_pred             HHHHHHHHHhhcCCCcCCC-CCCchhhHHHHHHHHHHHHHHHhh
Q psy7994         151 ALMNEFVELAQDGSHTKGG-WPNSAYAATKLGVTKLSFLQHALL  193 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~~~  193 (230)
                                 .-++..+. .+...|+.+|.+.+.+++.++++.
T Consensus       135 -----------~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  167 (338)
T PRK10675        135 -----------PYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ  167 (338)
T ss_pred             -----------ccccccCCCCCCChhHHHHHHHHHHHHHHHHhc
Confidence                       00111121 346899999999999999887654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.47  E-value=1e-12  Score=112.14  Aligned_cols=171  Identities=18%  Similarity=0.106  Sum_probs=112.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH-----------hhhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-----------KLQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~-----------~~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||++++++|+++ +..|+.+.|+.........           .+..+|++|++++..+++       ++|+|
T Consensus         9 VtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~V   80 (322)
T PLN02662          9 VTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------GCEGV   80 (322)
T ss_pred             EECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------CCCEE
Confidence            7999999999999999999 5567777776553221111           122379999988887775       68999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc-ccccchHHHHHHhhhhchhHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH-LCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||+|+....     ...+....++++|+.|+..+++++.... .-.+||++||.++. +.....+.     ..+      
T Consensus        81 ih~A~~~~~-----~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~v~~SS~~~~~y~~~~~~~-----~~~------  143 (322)
T PLN02662         81 FHTASPFYH-----DVTDPQAELIDPAVKGTLNVLRSCAKVP-SVKRVVVTSSMAAVAYNGKPLTP-----DVV------  143 (322)
T ss_pred             EEeCCcccC-----CCCChHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEccCHHHhcCCCcCCCC-----CCc------
Confidence            999996421     1112235789999999999999886432 22589999997642 21100000     000      


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCC------CCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGW------PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                    .++..+..      ....|+.+|.+.+.+++.++.+.       ++++..+.|+.+-++..
T Consensus       144 --------------~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lRp~~v~Gp~~  197 (322)
T PLN02662        144 --------------VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN-------GIDMVTINPAMVIGPLL  197 (322)
T ss_pred             --------------CCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc-------CCcEEEEeCCcccCCCC
Confidence                          00000111      12579999999998887665443       46688899998877753

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.45  E-value=2e-12  Score=109.93  Aligned_cols=167  Identities=16%  Similarity=0.089  Sum_probs=111.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh--------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK--------LQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~--------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|+||.++++.|.++| ..|++.++...........        +..+|++++++++++++.     .++|+||||
T Consensus         4 V~GatG~iG~~l~~~l~~~g-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv~~   77 (328)
T TIGR01179         4 VTGGAGYIGSHTVRQLLESG-HEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVIHF   77 (328)
T ss_pred             EeCCCCHHHHHHHHHHHhCC-CeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEEEC
Confidence            79999999999999999994 4566665533221111111        234899999999988874     479999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      +|.....    ...+...+.++.|+.++..+++++.+.  ...++|++||...+..+....                   
T Consensus        78 ag~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~ss~~~~g~~~~~~-------------------  132 (328)
T TIGR01179        78 AGLIAVG----ESVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFIFSSSAAVYGEPSSIP-------------------  132 (328)
T ss_pred             ccccCcc----hhhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEEEecchhhcCCCCCCC-------------------
Confidence            9975321    122345678899999999999987531  235899998865432111000                   


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                -++..+..+...|+.+|.+.+.+++.++.+.  .    ++++..+-|+.+-.
T Consensus       133 ----------~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~----~~~~~ilR~~~v~g  178 (328)
T TIGR01179       133 ----------ISEDSPLGPINPYGRSKLMSERILRDLSKAD--P----GLSYVILRYFNVAG  178 (328)
T ss_pred             ----------ccccCCCCCCCchHHHHHHHHHHHHHHHHhc--c----CCCEEEEecCcccC
Confidence                      0112233355789999999999998887652  1    34566677654433

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.45  E-value=1.7e-12  Score=110.22  Aligned_cols=148  Identities=15%  Similarity=0.023  Sum_probs=99.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch--hHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR--GQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~--~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||+|.||.++++.|.++|...|++++|....  ...........|+++++.++.+.+.   .+.++|+|||+|+... 
T Consensus         3 ItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~-   78 (314)
T TIGR02197         3 VTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSD-   78 (314)
T ss_pred             EeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhh---ccCCCCEEEECccccC-
Confidence            799999999999999999965467777664332  1211112223677777776665553   3458999999999642 


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                           ...++.+..+++|+.++..+++++..   .+.++|++||...+..+...                          
T Consensus        79 -----~~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~v~~SS~~vy~~~~~~--------------------------  124 (314)
T TIGR02197        79 -----TTETDGEYMMENNYQYSKRLLDWCAE---KGIPFIYASSAATYGDGEAG--------------------------  124 (314)
T ss_pred             -----ccccchHHHHHHHHHHHHHHHHHHHH---hCCcEEEEccHHhcCCCCCC--------------------------
Confidence                 12345677899999999999998853   23589999997654321100                          


Q ss_pred             HhhcCCCc-CCCCCCchhhHHHHHHHHHHHHHH
Q psy7994         159 LAQDGSHT-KGGWPNSAYAATKLGVTKLSFLQH  190 (230)
Q Consensus       159 ~~~~~~~~-~~~~~~~~Y~~sK~a~~~l~~~la  190 (230)
                          -+++ ....+...|+.+|.+.+.+++.+.
T Consensus       125 ----~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~  153 (314)
T TIGR02197       125 ----FREGRELERPLNVYGYSKFLFDQYVRRRV  153 (314)
T ss_pred             ----cccccCcCCCCCHHHHHHHHHHHHHHHHh
Confidence                0001 112345789999999999987643

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.43  E-value=2.9e-12  Score=113.93  Aligned_cols=153  Identities=20%  Similarity=0.192  Sum_probs=120.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|-||+++++++++.+...+++.+|++.++-....++..           +|+.|.+.++.+++..     ++|+|
T Consensus       255 VTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----kvd~V  329 (588)
T COG1086         255 VTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----KVDIV  329 (588)
T ss_pred             EeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----CCceE
Confidence            7999999999999999999889999999999887665555443           8999999999999865     79999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      +|.|..-+ .|   +-+..+.+.+++|++|+.++++++..  ..-.++|.+|+.-+.                       
T Consensus       330 fHAAA~KH-VP---l~E~nP~Eai~tNV~GT~nv~~aa~~--~~V~~~V~iSTDKAV-----------------------  380 (588)
T COG1086         330 FHAAALKH-VP---LVEYNPEEAIKTNVLGTENVAEAAIK--NGVKKFVLISTDKAV-----------------------  380 (588)
T ss_pred             EEhhhhcc-Cc---chhcCHHHHHHHhhHhHHHHHHHHHH--hCCCEEEEEecCccc-----------------------
Confidence            99999843 12   23355678999999999999999953  223689999986552                       


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCc
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGY  211 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~  211 (230)
                                          .|-..||+||...+.++++++......    +.++.+|-=|-
T Consensus       381 --------------------~PtNvmGaTKr~aE~~~~a~~~~~~~~----~T~f~~VRFGN  418 (588)
T COG1086         381 --------------------NPTNVMGATKRLAEKLFQAANRNVSGT----GTRFCVVRFGN  418 (588)
T ss_pred             --------------------CCchHhhHHHHHHHHHHHHHhhccCCC----CcEEEEEEecc
Confidence                                244899999999999999988765543    23454454443

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.42  E-value=3.1e-12  Score=109.08  Aligned_cols=167  Identities=18%  Similarity=0.099  Sum_probs=113.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||..+++.|+++ +..|+.++|+++......   -++..+|++|.+++.++++       .+|+|||+++...
T Consensus         5 ItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~   76 (328)
T TIGR03466         5 VTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVA-------GCRALFHVAADYR   76 (328)
T ss_pred             EECCccchhHHHHHHHHHC-CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHh-------CCCEEEEeceecc
Confidence            7999999999999999999 568888888766543221   1223489999998888775       6899999998532


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                            ...+.++..+++|+.++..+++++...  ..+++|++||...+........                       
T Consensus        77 ------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~-----------------------  125 (328)
T TIGR03466        77 ------LWAPDPEEMYAANVEGTRNLLRAALEA--GVERVVYTSSVATLGVRGDGTP-----------------------  125 (328)
T ss_pred             ------cCCCCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEechhhcCcCCCCCC-----------------------
Confidence                  112346778999999999999987531  2369999999876542110000                       


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                       .. ......+......|+.+|.+.+.+++.++.+.       |+.+..+.|+.+-.+
T Consensus       126 -~~-e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilR~~~~~G~  174 (328)
T TIGR03466       126 -AD-ETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK-------GLPVVIVNPSTPIGP  174 (328)
T ss_pred             -cC-ccCCCCcccccChHHHHHHHHHHHHHHHHHhc-------CCCEEEEeCCccCCC
Confidence             00 00001111123589999999999988776542       355777888766443

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.41  E-value=5.8e-12  Score=109.05  Aligned_cols=165  Identities=16%  Similarity=0.043  Sum_probs=109.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH----HHHH--------h--hhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ----EALE--------K--LQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~----~~~~--------~--~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|.||.+++++|.++| ..|+.++|......    ....        .  +..+|++|.+.+..+++       .+
T Consensus        20 VtGatGfiG~~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-------~~   91 (348)
T PRK15181         20 ITGVAGFIGSGLLEELLFLN-QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-------NV   91 (348)
T ss_pred             EECCccHHHHHHHHHHHHCC-CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-------CC
Confidence            79999999999999999994 56777766443211    1111        1  12389999888777765       58


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |+|||.|+.....    ...+.....+++|+.|+..+++++...  .-.++|++||...+......+             
T Consensus        92 d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v~~SS~~vyg~~~~~~-------------  152 (348)
T PRK15181         92 DYVLHQAALGSVP----RSLKDPIATNSANIDGFLNMLTAARDA--HVSSFTYAASSSTYGDHPDLP-------------  152 (348)
T ss_pred             CEEEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeechHhhCCCCCCC-------------
Confidence            9999999975321    112334567999999999999988431  224899999876543211000             


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                      ..++.+..|...|+.+|.+.+.+++.++...       ++++..+-|+.+-.+
T Consensus       153 ----------------~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lR~~~vyGp  198 (348)
T PRK15181        153 ----------------KIEERIGRPLSPYAVTKYVNELYADVFARSY-------EFNAIGLRYFNVFGR  198 (348)
T ss_pred             ----------------CCCCCCCCCCChhhHHHHHHHHHHHHHHHHh-------CCCEEEEEecceeCc
Confidence                            0111223455789999999999887765543       344666777666444

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.41  E-value=3.6e-12  Score=107.84  Aligned_cols=161  Identities=17%  Similarity=0.090  Sum_probs=104.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||.++++.|.++|..++++..+            ..+|+++.++++.+++..     ++|+|||+|+....  
T Consensus         2 ItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A~~~~~--   62 (306)
T PLN02725          2 VAGHRGLVGSAIVRKLEALGFTNLVLRTH------------KELDLTRQADVEAFFAKE-----KPTYVILAAAKVGG--   62 (306)
T ss_pred             cccCCCcccHHHHHHHHhCCCcEEEeecc------------ccCCCCCHHHHHHHHhcc-----CCCEEEEeeeeecc--
Confidence            89999999999999999996555544322            138999999998887763     68999999997421  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                       .....+.....++.|+.++..+++++...  .-.++|++||...+......+.                   .+-    
T Consensus        63 -~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~SS~~vyg~~~~~~~-------------------~E~----  116 (306)
T PLN02725         63 -IHANMTYPADFIRENLQIQTNVIDAAYRH--GVKKLLFLGSSCIYPKFAPQPI-------------------PET----  116 (306)
T ss_pred             -cchhhhCcHHHHHHHhHHHHHHHHHHHHc--CCCeEEEeCceeecCCCCCCCC-------------------CHH----
Confidence             01111234467889999999999988531  2358999999754332111000                   000    


Q ss_pred             hcCCCcCCCCC-CchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         161 QDGSHTKGGWP-NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       161 ~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                        .....+..+ ...|+.+|.+.+.+.+.+....       ++++..+.|+.+-.+
T Consensus       117 --~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~~R~~~vyG~  163 (306)
T PLN02725        117 --ALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY-------GWDAISGMPTNLYGP  163 (306)
T ss_pred             --HhccCCCCCCcchHHHHHHHHHHHHHHHHHHh-------CCCEEEEEecceeCC
Confidence              000001112 2459999999998887765443       344777777766444

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.40  E-value=3.6e-12  Score=103.58  Aligned_cols=168  Identities=18%  Similarity=0.116  Sum_probs=118.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH----hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~----~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+|.||.+++++|.++|. .|+...|..........    .+..+|+.|.+.++++++..     .+|.|||+|+..
T Consensus         3 I~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~   76 (236)
T PF01370_consen    3 ITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFS   76 (236)
T ss_dssp             EETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSSS
T ss_pred             EEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeecccccccccccccc-----CceEEEEeeccc
Confidence            799999999999999999955 45555555443332222    23348999999999999976     899999999974


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      .    .....+.....++.|+.++..+++++..  .+..++|++||...+..+...                        
T Consensus        77 ~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~i~~sS~~~y~~~~~~------------------------  126 (236)
T PF01370_consen   77 S----NPESFEDPEEIIEANVQGTRNLLEAARE--AGVKRFIFLSSASVYGDPDGE------------------------  126 (236)
T ss_dssp             S----HHHHHHSHHHHHHHHHHHHHHHHHHHHH--HTTSEEEEEEEGGGGTSSSSS------------------------
T ss_pred             c----cccccccccccccccccccccccccccc--ccccccccccccccccccccc------------------------
Confidence            2    0122245678889999999999998853  222599999996554332111                        


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                           .-++..+..+...|+.+|...+.+.+.+....       ++++..+.|+.+-.+.
T Consensus       127 -----~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~-------~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  127 -----PIDEDSPINPLSPYGASKRAAEELLRDYAKKY-------GLRVTILRPPNVYGPG  174 (236)
T ss_dssp             -----SBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH-------TSEEEEEEESEEESTT
T ss_pred             -----cccccccccccccccccccccccccccccccc-------cccccccccccccccc
Confidence                 00122333456789999999999987776554       3558888888776555

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.39  E-value=4.6e-12  Score=107.50  Aligned_cols=139  Identities=16%  Similarity=0.046  Sum_probs=98.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||++++++|.++|  .|+.++|...        ....|++|.+.+++++++.     ++|+|||+|+..... 
T Consensus         5 VtG~~GfiGs~l~~~L~~~g--~V~~~~~~~~--------~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~Aa~~~~~-   68 (299)
T PRK09987          5 LFGKTGQVGWELQRALAPLG--NLIALDVHST--------DYCGDFSNPEGVAETVRKI-----RPDVIVNAAAHTAVD-   68 (299)
T ss_pred             EECCCCHHHHHHHHHhhccC--CEEEeccccc--------cccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCcc-
Confidence            79999999999999999985  4666666432        1237999999999988753     689999999975321 


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                         ...+..+..+++|+.++..+++++..   .+.++|++||...+......+                           
T Consensus        69 ---~~~~~~~~~~~~N~~~~~~l~~aa~~---~g~~~v~~Ss~~Vy~~~~~~p---------------------------  115 (299)
T PRK09987         69 ---KAESEPEFAQLLNATSVEAIAKAANE---VGAWVVHYSTDYVFPGTGDIP---------------------------  115 (299)
T ss_pred             ---hhhcCHHHHHHHHHHHHHHHHHHHHH---cCCeEEEEccceEECCCCCCC---------------------------
Confidence               12233466788999999999998853   235899999866543211000                           


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHH
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQH  190 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la  190 (230)
                        -++..+..|...|+.+|.+.+.+++.+.
T Consensus       116 --~~E~~~~~P~~~Yg~sK~~~E~~~~~~~  143 (299)
T PRK09987        116 --WQETDATAPLNVYGETKLAGEKALQEHC  143 (299)
T ss_pred             --cCCCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence              0112234456789999999999886653

>PLN02427 UDP-apiose/xylose synthase

Probab=99.38  E-value=9.1e-12  Score=109.22  Aligned_cols=184  Identities=18%  Similarity=0.184  Sum_probs=110.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH----------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----------KLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~----------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|.||+++++.|+++|+..|+.++|+.++......          ++..+|++|.+.+.++++       .+|+||
T Consensus        19 VTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-------~~d~Vi   91 (386)
T PLN02427         19 MIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-------MADLTI   91 (386)
T ss_pred             EECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-------cCCEEE
Confidence            799999999999999999865778888887655443321          122389999988887765       489999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+|+...+....    ....+.+..|+.++..+++++..   ...++|++||...+........   ....+...  ...
T Consensus        92 HlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa~~---~~~r~v~~SS~~vYg~~~~~~~---~e~~p~~~--~~~  159 (386)
T PLN02427         92 NLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE---NNKRLIHFSTCEVYGKTIGSFL---PKDHPLRQ--DPA  159 (386)
T ss_pred             EcccccChhhhh----hChHHHHHHHHHHHHHHHHHHHh---cCCEEEEEeeeeeeCCCcCCCC---Cccccccc--ccc
Confidence            999975322111    11234567899999999988753   2358999999765432110000   00000000  000


Q ss_pred             HHHHHHHHHhhcCCCc---CCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         151 ALMNEFVELAQDGSHT---KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~---~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                           +....++....   ....+...|+.+|.+.+.++..++...       |+.+..+.|+.+-.+
T Consensus       160 -----~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~ilR~~~vyGp  215 (386)
T PLN02427        160 -----FYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-------GLEFTIVRPFNWIGP  215 (386)
T ss_pred             -----cccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhc-------CCceEEecccceeCC
Confidence                 00000000000   001123579999999999887654332       455777888776554

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.38  E-value=1.3e-11  Score=101.96  Aligned_cols=108  Identities=17%  Similarity=0.266  Sum_probs=74.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH-----hhhcccCCCH-HHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-----KLQKLDILDK-NSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~-----~~~~~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||+|+||++++++|+++ ++.|+...|++++......     .+..+|+++. +.+.+.+   .   .++|+||+++|
T Consensus        22 ItGasG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~---~---~~~d~vi~~~g   94 (251)
T PLN00141         22 VAGATGRTGKRIVEQLLAK-GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAI---G---DDSDAVICATG   94 (251)
T ss_pred             EECCCcHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHh---h---cCCCEEEECCC
Confidence            7999999999999999998 5678888888776544322     1223799873 3322222   0   27999999998


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      .....   +.     ...+++|+.+...+++++..  ...++||++||.+.
T Consensus        95 ~~~~~---~~-----~~~~~~n~~~~~~ll~a~~~--~~~~~iV~iSS~~v  135 (251)
T PLN00141         95 FRRSF---DP-----FAPWKVDNFGTVNLVEACRK--AGVTRFILVSSILV  135 (251)
T ss_pred             CCcCC---CC-----CCceeeehHHHHHHHHHHHH--cCCCEEEEEccccc
Confidence            74211   10     11256888899999998742  23479999999865

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.37  E-value=1.3e-11  Score=103.62  Aligned_cols=135  Identities=19%  Similarity=0.206  Sum_probs=97.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||.+++++|.++ ++.|+..+|.            .+|+.++++++++++..     ++|+|||++|....  
T Consensus         4 v~G~tG~iG~~l~~~l~~~-g~~v~~~~r~------------~~d~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~--   63 (287)
T TIGR01214         4 ITGANGQLGRELVQQLSPE-GRVVVALTSS------------QLDLTDPEALERLLRAI-----RPDAVVNTAAYTDV--   63 (287)
T ss_pred             EEcCCCHHHHHHHHHHHhc-CCEEEEeCCc------------ccCCCCHHHHHHHHHhC-----CCCEEEECCccccc--
Confidence            7999999999999999999 5677777775            37999999999888753     68999999997531  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                        .......+..+++|+.++..+++++..   .+.++|++||...+..+...+                           
T Consensus        64 --~~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~~~---------------------------  111 (287)
T TIGR01214        64 --DGAESDPEKAFAVNALAPQNLARAAAR---HGARLVHISTDYVFDGEGKRP---------------------------  111 (287)
T ss_pred             --cccccCHHHHHHHHHHHHHHHHHHHHH---cCCeEEEEeeeeeecCCCCCC---------------------------
Confidence              112234567889999999999998753   224899999865432111000                           


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHH
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQ  189 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~l  189 (230)
                        -++..+..+...|+.+|...+.+++.+
T Consensus       112 --~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214       112 --YREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             --CCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence              011122234578999999999888654

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.35  E-value=1.6e-11  Score=106.14  Aligned_cols=166  Identities=19%  Similarity=0.133  Sum_probs=106.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH--h--hhcccCC-CHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE--K--LQKLDIL-DKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~--~--~~~~D~s-~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|.||+++++.|++.++..|+.++|..........  .  +..+|++ +.+.+..+++       ++|+|||+|+.
T Consensus         6 VtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~ViH~aa~   78 (347)
T PRK11908          6 ILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK-------KCDVILPLVAI   78 (347)
T ss_pred             EECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc-------CCCEEEECccc
Confidence            799999999999999998755788888886654333221  1  2247998 5665555443       68999999997


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ..+..    ..++.+..+++|+.++..+++++..   .+.++|++||...+......+         .            
T Consensus        79 ~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~~---~~~~~v~~SS~~vyg~~~~~~---------~------------  130 (347)
T PRK11908         79 ATPAT----YVKQPLRVFELDFEANLPIVRSAVK---YGKHLVFPSTSEVYGMCPDEE---------F------------  130 (347)
T ss_pred             CChHH----hhcCcHHHHHHHHHHHHHHHHHHHh---cCCeEEEEecceeeccCCCcC---------c------------
Confidence            53321    1233456789999999999998864   236999999986543211100         0            


Q ss_pred             HHHHhhcCCCc--CC-CCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc
Q psy7994         156 FVELAQDGSHT--KG-GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV  212 (230)
Q Consensus       156 ~~~~~~~~~~~--~~-~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v  212 (230)
                          ..+....  .+ ..+...|+.+|.+.+.+++.++....       +.+..+-|+.+
T Consensus       131 ----~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-------~~~~ilR~~~v  179 (347)
T PRK11908        131 ----DPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEG-------LNFTLFRPFNW  179 (347)
T ss_pred             ----CccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcC-------CCeEEEeeeee
Confidence                0000000  01 12346899999999998887765433       33445555444

>PLN02686 cinnamoyl-CoA reductase

Probab=99.34  E-value=2.9e-11  Score=105.47  Aligned_cols=176  Identities=16%  Similarity=0.091  Sum_probs=112.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH--------------hhhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE--------------KLQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~--------------~~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|+||.++++.|+++ +..|+++.|+.+..+....              .+..+|++|.+++.++++       .+
T Consensus        58 VTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-------~~  129 (367)
T PLN02686         58 VTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-------GC  129 (367)
T ss_pred             EECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-------hc
Confidence            7999999999999999999 4567666776554433211              112379999999988876       47


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc-cccccchHHHHHHhhhhchh
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~-~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |.+||.++........    .......++|+.++..+++++...- .-.++|++||..+ .+.......    .. ... 
T Consensus       130 d~V~hlA~~~~~~~~~----~~~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~~vyg~~~~~~----~~-~~i-  198 (367)
T PLN02686        130 AGVFHTSAFVDPAGLS----GYTKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLACVWRQNYPHD----LP-PVI-  198 (367)
T ss_pred             cEEEecCeeecccccc----cccchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHHhcccccCCCC----CC-ccc-
Confidence            8999999875332211    1113456789999999999875321 1248999999642 221000000    00 000 


Q ss_pred             HHHHHHHHHHHHHHhhcC--CCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         146 VEELSALMNEFVELAQDG--SHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                    ..+.  ++..+..+...|+.||.+.+.+++.++.+   .    |++++++.|+.+-+|.
T Consensus       199 --------------~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~----gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        199 --------------DEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---K----GLKLATICPALVTGPG  250 (367)
T ss_pred             --------------CCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---c----CceEEEEcCCceECCC
Confidence                          0000  00012224468999999999999776654   2    5779999999998885

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.32  E-value=4.9e-11  Score=101.01  Aligned_cols=168  Identities=20%  Similarity=0.125  Sum_probs=112.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH--HhhhcccCCCHHHHHHHHHHHHhhcCCC-cEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL--EKLQKLDILDKNSIKALHDHLEAEHGGV-DVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~--~~~~~~D~s~~~~v~~~~~~~~~~~~~i-d~lv~~ag~~~   77 (230)
                      ||||+|.||.+++.+|.++ +..|+.++|.........  ..+..+|+++.+.+...++       .. |+|||+|+...
T Consensus         5 VtG~tGfiG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~~d~vih~aa~~~   76 (314)
T COG0451           5 VTGGAGFIGSHLVERLLAA-GHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAK-------GVPDAVIHLAAQSS   76 (314)
T ss_pred             EEcCcccHHHHHHHHHHhC-CCeEEEEeCCCccccccccccceeeecccchHHHHHHHh-------cCCCEEEEccccCc
Confidence            7999999999999999999 678888888666544332  2233378888865555554       23 99999999863


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      .....  . ......+++|+.++..+++++..  ....++|+.||.+....+....                        
T Consensus        77 ~~~~~--~-~~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~~~~~~~~~------------------------  127 (314)
T COG0451          77 VPDSN--A-SDPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSVVYGDPPPL------------------------  127 (314)
T ss_pred             hhhhh--h-hCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCceECCCCCCC------------------------
Confidence            21110  0 13456899999999999999964  3346899966656544321000                        


Q ss_pred             HHhhcCCCc-CCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         158 ELAQDGSHT-KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       158 ~~~~~~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                          ..++. .+..|...|+.+|.+.+.+++.++.   ..    |+.+..+-|+.+-.+.
T Consensus       128 ----~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~----~~~~~ilR~~~vyGp~  176 (314)
T COG0451         128 ----PIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LY----GLPVVILRPFNVYGPG  176 (314)
T ss_pred             ----CcccccCCCCCCCHHHHHHHHHHHHHHHHHH---Hh----CCCeEEEeeeeeeCCC
Confidence                00111 2333445899999999999987777   22    4557777777654443

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.29  E-value=3.9e-11  Score=112.14  Aligned_cols=167  Identities=14%  Similarity=0.081  Sum_probs=108.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH----hhhcccCCCHHH-HHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----KLQKLDILDKNS-IKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~----~~~~~D~s~~~~-v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|.||.+++++|+++++..|+..+|..........    ++..+|++|.+. ++++++       ++|+|||+|+.
T Consensus       320 VTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~-------~~D~ViHlAa~  392 (660)
T PRK08125        320 ILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIK-------KCDVVLPLVAI  392 (660)
T ss_pred             EECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhc-------CCCEEEECccc
Confidence            799999999999999998756788888886654332211    122379998655 344432       69999999997


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ..+..    ..+..+..+++|+.++..+++++...   +.++|++||...+......+                      
T Consensus       393 ~~~~~----~~~~~~~~~~~Nv~~t~~ll~a~~~~---~~~~V~~SS~~vyg~~~~~~----------------------  443 (660)
T PRK08125        393 ATPIE----YTRNPLRVFELDFEENLKIIRYCVKY---NKRIIFPSTSEVYGMCTDKY----------------------  443 (660)
T ss_pred             cCchh----hccCHHHHHHhhHHHHHHHHHHHHhc---CCeEEEEcchhhcCCCCCCC----------------------
Confidence            54321    11233567899999999999998653   25899999976543211000                      


Q ss_pred             HHHHhhcCCCc----CC-CCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         156 FVELAQDGSHT----KG-GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       156 ~~~~~~~~~~~----~~-~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                           .+++..    .+ ..+...|+.||.+.+.+++.++..++       +++..+-|+.+-.+
T Consensus       444 -----~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g-------~~~~ilR~~~vyGp  496 (660)
T PRK08125        444 -----FDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEG-------LRFTLFRPFNWMGP  496 (660)
T ss_pred             -----cCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcC-------CceEEEEEceeeCC
Confidence                 000000    01 12346899999999999988765543       33566666655443

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.26  E-value=6.7e-11  Score=98.31  Aligned_cols=134  Identities=20%  Similarity=0.171  Sum_probs=103.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      |||++|-+|.++++.|.  +...|+.+++..            +|++|++.+.+++.+.     ++|+|||+|++..   
T Consensus         5 i~G~~GqLG~~L~~~l~--~~~~v~a~~~~~------------~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~---   62 (281)
T COG1091           5 ITGANGQLGTELRRALP--GEFEVIATDRAE------------LDITDPDAVLEVIRET-----RPDVVINAAAYTA---   62 (281)
T ss_pred             EEcCCChHHHHHHHHhC--CCceEEeccCcc------------ccccChHHHHHHHHhh-----CCCEEEECccccc---
Confidence            79999999999999998  366777776655            7999999999999987     8999999999863   


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                       .+..+.+.+.-+.+|..|+..+++++.   +-+.++|++|+-..+-+....+.                          
T Consensus        63 -vD~aE~~~e~A~~vNa~~~~~lA~aa~---~~ga~lVhiSTDyVFDG~~~~~Y--------------------------  112 (281)
T COG1091          63 -VDKAESEPELAFAVNATGAENLARAAA---EVGARLVHISTDYVFDGEKGGPY--------------------------  112 (281)
T ss_pred             -cccccCCHHHHHHhHHHHHHHHHHHHH---HhCCeEEEeecceEecCCCCCCC--------------------------
Confidence             233344567899999999999999884   23568999998665332221111                          


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHH
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQ  189 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~l  189 (230)
                         .+....-|...||.||.+-+...+..
T Consensus       113 ---~E~D~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091         113 ---KETDTPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             ---CCCCCCCChhhhhHHHHHHHHHHHHh
Confidence               22334567799999999999888554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.25  E-value=1.6e-10  Score=108.26  Aligned_cols=170  Identities=19%  Similarity=0.118  Sum_probs=108.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCc--chhHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDA--SRGQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~--~~~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|.||+++++.|.++| +..|+..++..  ........       ++..+|++|.+.+..++..     .++|+||
T Consensus        11 VTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~~~D~Vi   85 (668)
T PLN02260         11 ITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----EGIDTIM   85 (668)
T ss_pred             EECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-----cCCCEEE
Confidence            79999999999999999985 35677776642  22222111       1223899999887766542     3799999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+|+.....    ...+.....+++|+.|+..+++++... ....++|++||...+......+.                
T Consensus        86 HlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~vkr~I~~SS~~vyg~~~~~~~----------------  144 (668)
T PLN02260         86 HFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAD----------------  144 (668)
T ss_pred             ECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEcchHHhCCCccccc----------------
Confidence            999975321    112234567899999999999987431 11358999999765432110000                


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN  213 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~  213 (230)
                                ...++..+..|...|+.+|.+.+.+++.++.+..       +.+..+-|+.+-
T Consensus       145 ----------~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~-------l~~vilR~~~Vy  190 (668)
T PLN02260        145 ----------VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-------LPVITTRGNNVY  190 (668)
T ss_pred             ----------cCccccCCCCCCCCcHHHHHHHHHHHHHHHHHcC-------CCEEEECccccc
Confidence                      0001122333557899999999999987765532       335666666553

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.25  E-value=2.8e-10  Score=98.19  Aligned_cols=170  Identities=21%  Similarity=0.159  Sum_probs=105.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchh------HHHHH------------hhh--cccCCCHHH--HHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRG------QEALE------------KLQ--KLDILDKNS--IKALHD   57 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~------~~~~~------------~~~--~~D~s~~~~--v~~~~~   57 (230)
                      ||||+|+||++++++|+++|. ..|+...|+.+..      .....            .+.  .+|++++.-  -.....
T Consensus         4 vtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~   83 (367)
T TIGR01746         4 LTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWE   83 (367)
T ss_pred             EeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHH
Confidence            799999999999999999953 4688888876521      11111            111  268775421  011112


Q ss_pred             HHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHH
Q psy7994          58 HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKK  137 (230)
Q Consensus        58 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~  137 (230)
                      ++   ...+|+|||||+....       ...++..+++|+.++..+++.+...  ...+++++||...+.......    
T Consensus        84 ~~---~~~~d~vih~a~~~~~-------~~~~~~~~~~nv~g~~~ll~~a~~~--~~~~~v~iSS~~v~~~~~~~~----  147 (367)
T TIGR01746        84 RL---AENVDTIVHNGALVNW-------VYPYSELRAANVLGTREVLRLAASG--RAKPLHYVSTISVLAAIDLST----  147 (367)
T ss_pred             HH---HhhCCEEEeCCcEecc-------CCcHHHHhhhhhHHHHHHHHHHhhC--CCceEEEEccccccCCcCCCC----
Confidence            22   1379999999997531       1235677889999999999987542  224699999987643211000    


Q ss_pred             HhhhhchhHHHHHHHHHHHHHHhhcCCC-cCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         138 KLLHEIKSVEELSALMNEFVELAQDGSH-TKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                           .                ..+... .....+...|+.+|.+.+.+++.++.    .    |++++.+.||.+-++
T Consensus       148 -----~----------------~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~----g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       148 -----V----------------TEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----R----GLPVTIVRPGRILGN  197 (367)
T ss_pred             -----c----------------cccccccccccccCCChHHHHHHHHHHHHHHHh----c----CCCEEEECCCceeec
Confidence                 0                000000 00111236899999999988765432    2    577999999998765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1371|consensus

Probab=99.24  E-value=6.9e-11  Score=98.76  Aligned_cols=154  Identities=17%  Similarity=0.149  Sum_probs=113.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHH---HHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQE---ALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~---~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|.||.+.+.+|.++|..++++..-+...++.   ..+...        +.|++|.+.+++++++.     ++|.|
T Consensus         7 VtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----~fd~V   81 (343)
T KOG1371|consen    7 VTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----KFDAV   81 (343)
T ss_pred             EecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----CCceE
Confidence            799999999999999999977777776555443332   222222        28999999999999986     79999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      +|-|+...-.    .+.+...+....|+.|++.+++.+...  ....+|+.||...+..|..-+-               
T Consensus        82 ~Hfa~~~~vg----eS~~~p~~Y~~nNi~gtlnlLe~~~~~--~~~~~V~sssatvYG~p~~ip~---------------  140 (343)
T KOG1371|consen   82 MHFAALAAVG----ESMENPLSYYHNNIAGTLNLLEVMKAH--NVKALVFSSSATVYGLPTKVPI---------------  140 (343)
T ss_pred             Eeehhhhccc----hhhhCchhheehhhhhHHHHHHHHHHc--CCceEEEecceeeecCcceeec---------------
Confidence            9999986322    344555788999999999999987532  2468888888777664432110               


Q ss_pred             HHHHHHHHHHhhcCCCcCCC-CCCchhhHHHHHHHHHHHHHHHhhh
Q psy7994         150 SALMNEFVELAQDGSHTKGG-WPNSAYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~~~~  194 (230)
                                    ++..+. +|..+|+.+|.+++.+.+.+...+.
T Consensus       141 --------------te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  141 --------------TEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             --------------cCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence                          111222 5789999999999999999887765

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.22  E-value=3.6e-11  Score=101.48  Aligned_cols=134  Identities=18%  Similarity=0.192  Sum_probs=91.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      |||++|.||.++.+.|.++ +..++.++|.            .+|++|.+++.+++++.     ++|+|||||+....  
T Consensus         5 I~GasG~lG~~l~~~l~~~-~~~v~~~~r~------------~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~~--   64 (286)
T PF04321_consen    5 ITGASGFLGSALARALKER-GYEVIATSRS------------DLDLTDPEAVAKLLEAF-----KPDVVINCAAYTNV--   64 (286)
T ss_dssp             EETTTSHHHHHHHHHHTTT-SEEEEEESTT------------CS-TTSHHHHHHHHHHH-------SEEEE------H--
T ss_pred             EECCCCHHHHHHHHHHhhC-CCEEEEeCch------------hcCCCCHHHHHHHHHHh-----CCCeEeccceeecH--
Confidence            7999999999999999997 5677777776            48999999999999887     79999999998521  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                        +.-++..+..+++|+.++..+++.+.   ..+.++|++||...+.+....+                           
T Consensus        65 --~~ce~~p~~a~~iN~~~~~~la~~~~---~~~~~li~~STd~VFdG~~~~~---------------------------  112 (286)
T PF04321_consen   65 --DACEKNPEEAYAINVDATKNLAEACK---ERGARLIHISTDYVFDGDKGGP---------------------------  112 (286)
T ss_dssp             --HHHHHSHHHHHHHHTHHHHHHHHHHH---HCT-EEEEEEEGGGS-SSTSSS---------------------------
T ss_pred             --HhhhhChhhhHHHhhHHHHHHHHHHH---HcCCcEEEeeccEEEcCCcccc---------------------------
Confidence              12224466789999999999999885   3457999999975533221100                           


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHH
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFL  188 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~  188 (230)
                        =++.....|...||.+|...+...+.
T Consensus       113 --y~E~d~~~P~~~YG~~K~~~E~~v~~  138 (286)
T PF04321_consen  113 --YTEDDPPNPLNVYGRSKLEGEQAVRA  138 (286)
T ss_dssp             --B-TTS----SSHHHHHHHHHHHHHHH
T ss_pred             --cccCCCCCCCCHHHHHHHHHHHHHHH
Confidence              01223445679999999999987754

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.22  E-value=2.5e-10  Score=99.77  Aligned_cols=172  Identities=17%  Similarity=0.081  Sum_probs=107.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-hHHH--HHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-GQEA--LEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-~~~~--~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|.||.++++.|.++ ++.|+.++|.... ....  ...+..+|+++.+.+..++.       ++|+|||+|+...
T Consensus        26 VtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~~   97 (370)
T PLN02695         26 ITGAGGFIASHIARRLKAE-GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTK-------GVDHVFNLAADMG   97 (370)
T ss_pred             EECCccHHHHHHHHHHHhC-CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHh-------CCCEEEEcccccC
Confidence            7999999999999999999 5577777765332 1111  11233479999888766654       5899999998643


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      .....   .......+..|+.++..+++++..  ..-.++|++||...+......+.     .                 
T Consensus        98 ~~~~~---~~~~~~~~~~N~~~t~nll~aa~~--~~vk~~V~~SS~~vYg~~~~~~~-----~-----------------  150 (370)
T PLN02695         98 GMGFI---QSNHSVIMYNNTMISFNMLEAARI--NGVKRFFYASSACIYPEFKQLET-----N-----------------  150 (370)
T ss_pred             Ccccc---ccCchhhHHHHHHHHHHHHHHHHH--hCCCEEEEeCchhhcCCccccCc-----C-----------------
Confidence            21111   112344577899999999998742  12258999999755431110000     0                 


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                       .+..++...+..|...|+.+|.+.+.+++.++..+       |+.+..+-|+.+-.+
T Consensus       151 -~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~-------g~~~~ilR~~~vyGp  200 (370)
T PLN02695        151 -VSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF-------GIECRIGRFHNIYGP  200 (370)
T ss_pred             -CCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCEEEEEECCccCC
Confidence             00000111134456899999999999998776543       244666666655444

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.20  E-value=2e-10  Score=94.91  Aligned_cols=175  Identities=17%  Similarity=0.117  Sum_probs=91.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcch---hHHHHHhh-------------h-c-----ccCCCHH-HH-HHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASR---GQEALEKL-------------Q-K-----LDILDKN-SI-KAL   55 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~---~~~~~~~~-------------~-~-----~D~s~~~-~v-~~~   55 (230)
                      ||||||.||.++..+|++++.. .|+...|..+.   .+...+.+             . +     +|++++. .+ ...
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            6999999999999999999542 88888887643   12221111             1 1     7998764 11 122


Q ss_pred             HHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHH
Q psy7994          56 HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEAL  135 (230)
Q Consensus        56 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~  135 (230)
                      ++++.+   .+|+|||||+..+..       ...++..++|+.|+..+++.+...  +..+++++|| +...+...... 
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~-------~~~~~~~~~NV~gt~~ll~la~~~--~~~~~~~iST-a~v~~~~~~~~-  146 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFN-------APYSELRAVNVDGTRNLLRLAAQG--KRKRFHYIST-AYVAGSRPGTI-  146 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTSS--S---EEEEEE-GGGTTS-TTT--
T ss_pred             hhcccc---ccceeeecchhhhhc-------ccchhhhhhHHHHHHHHHHHHHhc--cCcceEEecc-ccccCCCCCcc-
Confidence            233322   699999999985321       245558899999999999988642  2239999999 32111111000 


Q ss_pred             HHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         136 KKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                      ..+...                  ........+......|..||..-+.+.+..+.+.       |+.+..+-||.+-.
T Consensus       147 ~~~~~~------------------~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~-------g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  147 EEKVYP------------------EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH-------GLPVTIYRPGIIVG  200 (249)
T ss_dssp             -SSS-H------------------HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH----------EEEEEE-EEE-
T ss_pred             cccccc------------------cccccchhhccCCccHHHHHHHHHHHHHHHHhcC-------CceEEEEecCcccc
Confidence            000000                  0000111122233799999999999987766542       34588888988755

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.16  E-value=2.5e-10  Score=100.38  Aligned_cols=110  Identities=22%  Similarity=0.177  Sum_probs=79.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH------HHHH-----hhhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ------EALE-----KLQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~------~~~~-----~~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||.+++++|.++ +..|+++.|+..+..      ....     ++..+|++|+++++.+++.+.   .++|+|
T Consensus        65 VtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~---~~~D~V  140 (390)
T PLN02657         65 VVGATGYIGKFVVRELVRR-GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG---DPVDVV  140 (390)
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC---CCCcEE
Confidence            7999999999999999999 567888888765432      1111     123389999999999987541   269999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      |||++.....         ....+++|+.++..+++++..  ...+++|++||...
T Consensus       141 i~~aa~~~~~---------~~~~~~vn~~~~~~ll~aa~~--~gv~r~V~iSS~~v  185 (390)
T PLN02657        141 VSCLASRTGG---------VKDSWKIDYQATKNSLDAGRE--VGAKHFVLLSAICV  185 (390)
T ss_pred             EECCccCCCC---------CccchhhHHHHHHHHHHHHHH--cCCCEEEEEeeccc
Confidence            9999853211         123457788888888888742  12358999999765

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.13  E-value=2.9e-10  Score=101.30  Aligned_cols=146  Identities=18%  Similarity=0.140  Sum_probs=92.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-hHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-GQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|.||.+++++|.++ +..|+.++|.... .+....       ++...|+.+.     .+       .++|+|||+
T Consensus       125 VTGatGFIGs~Lv~~Ll~~-G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~-------~~~D~ViHl  191 (436)
T PLN02166        125 VTGGAGFVGSHLVDKLIGR-GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----IL-------LEVDQIYHL  191 (436)
T ss_pred             EECCccHHHHHHHHHHHHC-CCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cc-------cCCCEEEEC
Confidence            7999999999999999999 4567777664322 111111       0111344432     11       268999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      |+...+...    .......+++|+.++..+++++...   +.++|++||...+..+...+                   
T Consensus       192 Aa~~~~~~~----~~~p~~~~~~Nv~gT~nLleaa~~~---g~r~V~~SS~~VYg~~~~~p-------------------  245 (436)
T PLN02166        192 ACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GARFLLTSTSEVYGDPLEHP-------------------  245 (436)
T ss_pred             ceeccchhh----ccCHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECcHHHhCCCCCCC-------------------
Confidence            987533211    1234678999999999999988532   34899999876543221100                   


Q ss_pred             HHHHHHHhhcCC---CcCCCCCCchhhHHHHHHHHHHHHHHHhh
Q psy7994         153 MNEFVELAQDGS---HTKGGWPNSAYAATKLGVTKLSFLQHALL  193 (230)
Q Consensus       153 ~~~~~~~~~~~~---~~~~~~~~~~Y~~sK~a~~~l~~~la~~~  193 (230)
                              .+++   ...+..+...|+.+|.+.+.+++.++...
T Consensus       246 --------~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~  281 (436)
T PLN02166        246 --------QKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA  281 (436)
T ss_pred             --------CCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence                    0000   01133345789999999999998776543

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.12  E-value=4e-10  Score=100.56  Aligned_cols=146  Identities=16%  Similarity=0.122  Sum_probs=91.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchh-HHHHHh-------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRG-QEALEK-------LQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~-~~~~~~-------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|.||.+++++|.++| ..|+.+++..... +.....       +...|+.++     ++       ..+|+|||+
T Consensus       124 VTGatGfIGs~Lv~~Ll~~G-~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l-------~~~D~ViHl  190 (442)
T PLN02206        124 VTGGAGFVGSHLVDRLMARG-DSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----IL-------LEVDQIYHL  190 (442)
T ss_pred             EECcccHHHHHHHHHHHHCc-CEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hh-------cCCCEEEEe
Confidence            79999999999999999994 5666666542211 111111       112455443     22       258999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      |+...+..    ........+++|+.++..+++++..   .+.++|++||...+..+...+.                  
T Consensus       191 Aa~~~~~~----~~~~p~~~~~~Nv~gt~nLleaa~~---~g~r~V~~SS~~VYg~~~~~p~------------------  245 (442)
T PLN02206        191 ACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR---VGARFLLTSTSEVYGDPLQHPQ------------------  245 (442)
T ss_pred             eeecchhh----hhcCHHHHHHHHHHHHHHHHHHHHH---hCCEEEEECChHHhCCCCCCCC------------------
Confidence            99753221    1123467899999999999998853   2348999999765432211000                  


Q ss_pred             HHHHHHHhhcCC---CcCCCCCCchhhHHHHHHHHHHHHHHHhh
Q psy7994         153 MNEFVELAQDGS---HTKGGWPNSAYAATKLGVTKLSFLQHALL  193 (230)
Q Consensus       153 ~~~~~~~~~~~~---~~~~~~~~~~Y~~sK~a~~~l~~~la~~~  193 (230)
                               .++   ...+..+...|+.+|.+.+.+++.+....
T Consensus       246 ---------~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~  280 (442)
T PLN02206        246 ---------VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA  280 (442)
T ss_pred             ---------CccccccCCCCCccchHHHHHHHHHHHHHHHHHHh
Confidence                     000   01122335789999999999887765543

>PLN02778 3,5-epimerase/4-reductase

Probab=99.10  E-value=1.4e-09  Score=92.27  Aligned_cols=142  Identities=17%  Similarity=0.060  Sum_probs=87.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||.++++.|.++|. .|+...               .|+++.+.+...++..     ++|+|||+||......
T Consensus        14 VtG~tGfiG~~l~~~L~~~g~-~V~~~~---------------~~~~~~~~v~~~l~~~-----~~D~ViH~Aa~~~~~~   72 (298)
T PLN02778         14 IYGKTGWIGGLLGKLCQEQGI-DFHYGS---------------GRLENRASLEADIDAV-----KPTHVFNAAGVTGRPN   72 (298)
T ss_pred             EECCCCHHHHHHHHHHHhCCC-EEEEec---------------CccCCHHHHHHHHHhc-----CCCEEEECCcccCCCC
Confidence            799999999999999999954 554321               3455666666665542     6899999999853211


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                       .+...+.....+++|+.++..+++++...   +.+.+++||...+......+. +                      ..
T Consensus        73 -~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~---gv~~v~~sS~~vy~~~~~~p~-~----------------------~~  125 (298)
T PLN02778         73 -VDWCESHKVETIRANVVGTLTLADVCRER---GLVLTNYATGCIFEYDDAHPL-G----------------------SG  125 (298)
T ss_pred             -chhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEecceEeCCCCCCCc-c----------------------cC
Confidence             11222445678999999999999998532   224455555432211000000 0                      00


Q ss_pred             hcCCC-cCCCCCCchhhHHHHHHHHHHHHHH
Q psy7994         161 QDGSH-TKGGWPNSAYAATKLGVTKLSFLQH  190 (230)
Q Consensus       161 ~~~~~-~~~~~~~~~Y~~sK~a~~~l~~~la  190 (230)
                      ..-++ ..+.++...|+.||.+.+.+++.++
T Consensus       126 ~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        126 IGFKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCCCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            00011 1123344789999999999998765

>KOG4022|consensus

Probab=99.05  E-value=7.8e-09  Score=78.47  Aligned_cols=177  Identities=13%  Similarity=0.045  Sum_probs=116.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhhhcccCCCHHHHHHHHHHHHhhcC--CCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKLQKLDILDKNSIKALHDHLEAEHG--GVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~--~id~lv~~ag~~~   77 (230)
                      |-||-|.+|.++...|-.+++ -|.-++..+. ..+.  .-+...|-+=.++-+.++++.-+.+.  ++|.|+..||..-
T Consensus         8 vYGGkGALGSacv~~Fkanny-wV~siDl~eNe~Ad~--sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGWA   84 (236)
T KOG4022|consen    8 VYGGKGALGSACVEFFKANNY-WVLSIDLSENEQADS--SILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWA   84 (236)
T ss_pred             EEcCcchHhHHHHHHHHhcCe-EEEEEeecccccccc--eEEecCCcchhHHHHHHHHHHHHhhcccccceEEEeecccc
Confidence            348889999999999999844 4444443322 1111  11112333334444555666555443  8999999998753


Q ss_pred             ccCCCCC-ChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          78 KVNSSEP-FGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        78 ~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      -+.-... -.+..+-+++..+.......+.....++.+|-+-..+.-++                               
T Consensus        85 GGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaA-------------------------------  133 (236)
T KOG4022|consen   85 GGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAA-------------------------------  133 (236)
T ss_pred             CCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccc-------------------------------
Confidence            3221111 11334456666666666666766677788877666655444                               


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP  222 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~  222 (230)
                               ..+.+++-.|+++|+|+.+|+++|+.+-.  +.+.|-.+.+|.|-..+|||.+++.|
T Consensus       134 ---------l~gTPgMIGYGMAKaAVHqLt~SLaak~S--GlP~gsaa~~ilPVTLDTPMNRKwMP  188 (236)
T KOG4022|consen  134 ---------LGGTPGMIGYGMAKAAVHQLTSSLAAKDS--GLPDGSAALTILPVTLDTPMNRKWMP  188 (236)
T ss_pred             ---------cCCCCcccchhHHHHHHHHHHHHhccccc--CCCCCceeEEEeeeeccCccccccCC
Confidence                     23677889999999999999999987532  22336778999999999999998865

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.04  E-value=5.3e-10  Score=91.22  Aligned_cols=103  Identities=13%  Similarity=0.012  Sum_probs=76.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      +|||||+++|+.|+++|+ .|+++++... +...  ....+|+++.++++.+++++.+.++++|++|||||+....++.+
T Consensus        23 SSGgIG~AIA~~la~~Ga-~Vvlv~~~~~-l~~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~~~   98 (227)
T TIGR02114        23 STGHLGKIITETFLSAGH-EVTLVTTKRA-LKPE--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPVYM   98 (227)
T ss_pred             cccHHHHHHHHHHHHCCC-EEEEEcChhh-cccc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccchhh
Confidence            468999999999999955 6666654211 1110  11248999999999999999999999999999999877777788


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRS  113 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~  113 (230)
                      .+.++|+++   +..+.+++.+-.-.++++
T Consensus        99 ~s~e~~~~~---~~~~~~~~~~~~~~Ki~~  125 (227)
T TIGR02114        99 TDLEQVQAS---DNLNEFLSKQNHEAKISS  125 (227)
T ss_pred             CCHHHHhhh---cchhhhhccccccCCccc
Confidence            888888877   445666766644444443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.02  E-value=9.1e-09  Score=86.36  Aligned_cols=169  Identities=16%  Similarity=0.149  Sum_probs=127.0

Q ss_pred             CCC-CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hc--ccCCCHHHHHHHHHHHHhhcC----------
Q psy7994           2 TGA-NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QK--LDILDKNSIKALHDHLEAEHG----------   64 (230)
Q Consensus         2 tG~-s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~--~D~s~~~~v~~~~~~~~~~~~----------   64 (230)
                      .|. +.-|++.++..|-++ |+.|+++..+.+.......+-    +.  .|..++.++...+.+..+.+.          
T Consensus         9 ~Gs~~~PltR~la~DLeRR-GFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~   87 (299)
T PF08643_consen    9 AGSPHDPLTRSLALDLERR-GFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAP   87 (299)
T ss_pred             ECCCCCccHHHHHHHHhhC-CeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCC
Confidence            353 588999999999999 779998888877555433322    11  566666666666666655443          


Q ss_pred             ----CCcEEEEccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----CceEEEec-CCCccccccchHH
Q psy7994          65 ----GVDVLVNNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----HGRVVNVS-SSCGHLCHVTSEA  134 (230)
Q Consensus        65 ----~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~g~ii~~s-S~~~~~~~~~~~~  134 (230)
                          ++..||......+ .+++++.+.+.|.+.++.|+.-++.+++.++|+|+.    +.+||.+. |+.+..++     
T Consensus        88 ~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~-----  162 (299)
T PF08643_consen   88 PHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNP-----  162 (299)
T ss_pred             CceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCC-----
Confidence                4566776666655 577889999999999999999999999999999976    35555544 55554432     


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                                         +..++-.....++.+|+.+|.+|+++.    ||.|..++-|.++-
T Consensus       163 -----------------------------------PfhspE~~~~~al~~~~~~LrrEl~~~----~I~V~~i~LG~l~i  203 (299)
T PF08643_consen  163 -----------------------------------PFHSPESIVSSALSSFFTSLRRELRPH----NIDVTQIKLGNLDI  203 (299)
T ss_pred             -----------------------------------CccCHHHHHHHHHHHHHHHHHHHhhhc----CCceEEEEeeeecc
Confidence                                               233778889999999999999999977    67799999998765


Q ss_pred             C
Q psy7994         215 D  215 (230)
Q Consensus       215 ~  215 (230)
                      .
T Consensus       204 ~  204 (299)
T PF08643_consen  204 G  204 (299)
T ss_pred             c
Confidence            5

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.02  E-value=4.2e-09  Score=90.03  Aligned_cols=106  Identities=13%  Similarity=0.131  Sum_probs=77.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|.||++++++|.++ ++.|....|+.++.....   -++..+|++|++++.++++       .+|+|||+++...
T Consensus         5 VtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~~~~~~   76 (317)
T CHL00194          5 VIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFK-------GVTAIIDASTSRP   76 (317)
T ss_pred             EECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHC-------CCCEEEECCCCCC
Confidence            7999999999999999999 467888888765443221   1233489999999887765       6899999876421


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                               .......++|+.++..+++++...  .-.++|++||..+
T Consensus        77 ---------~~~~~~~~~~~~~~~~l~~aa~~~--gvkr~I~~Ss~~~  113 (317)
T CHL00194         77 ---------SDLYNAKQIDWDGKLALIEAAKAA--KIKRFIFFSILNA  113 (317)
T ss_pred             ---------CCccchhhhhHHHHHHHHHHHHHc--CCCEEEEeccccc
Confidence                     112346678999999999888531  1248999998644

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.97  E-value=1e-08  Score=95.83  Aligned_cols=163  Identities=20%  Similarity=0.119  Sum_probs=101.6

Q ss_pred             CCCCCCcHHHHHHHHHHH--hcCCeEEEEecCcch--hHHHHHh-------hhcccCCCHHH--HHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQ--QFDGIIYLTARDASR--GQEALEK-------LQKLDILDKNS--IKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~--~g~~~vi~~~r~~~~--~~~~~~~-------~~~~D~s~~~~--v~~~~~~~~~~~~~id   67 (230)
                      ||||+|.||.+++++|++  + +..|+.++|+...  +......       +..+|++|++.  ....++++    .++|
T Consensus         5 VTGatGfIG~~lv~~Ll~~~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~~D   79 (657)
T PRK07201          5 VTGGTGFIGRRLVSRLLDRRR-EATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GDID   79 (657)
T ss_pred             EeCCccHHHHHHHHHHHhcCC-CCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cCCC
Confidence            799999999999999994  5 6688888886432  2222211       11379888531  11122222    3799


Q ss_pred             EEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      +|||+|+.....       ......+++|+.++..+++++...  ...++|++||...+......       ..      
T Consensus        80 ~Vih~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~~SS~~v~g~~~~~-------~~------  137 (657)
T PRK07201         80 HVVHLAAIYDLT-------ADEEAQRAANVDGTRNVVELAERL--QAATFHHVSSIAVAGDYEGV-------FR------  137 (657)
T ss_pred             EEEECceeecCC-------CCHHHHHHHHhHHHHHHHHHHHhc--CCCeEEEEeccccccCccCc-------cc------
Confidence            999999974321       123567789999999999987531  23689999987664311100       00      


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                    ......+..+...|+.+|...+.+.+.      ..    |+.+..+.|+.+-.
T Consensus       138 --------------e~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~----g~~~~ilRp~~v~G  180 (657)
T PRK07201        138 --------------EDDFDEGQGLPTPYHRTKFEAEKLVRE------EC----GLPWRVYRPAVVVG  180 (657)
T ss_pred             --------------cccchhhcCCCCchHHHHHHHHHHHHH------cC----CCcEEEEcCCeeee
Confidence                          000001112236799999999988742      12    46688888887744

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.89  E-value=4e-09  Score=86.79  Aligned_cols=171  Identities=18%  Similarity=0.065  Sum_probs=122.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch--hHH--HHH---------hhhcccCCCHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR--GQE--ALE---------KLQKLDILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~--~~~--~~~---------~~~~~D~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      |||-+|--|.=+++.|.++|+ .|..+.|..+.  ...  ..+         .+..+|++|...+.++++++     ++|
T Consensus         7 ITGITGQDGsYLa~lLLekGY-~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-----~Pd   80 (345)
T COG1089           7 ITGITGQDGSYLAELLLEKGY-EVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-----QPD   80 (345)
T ss_pred             EecccCCchHHHHHHHHhcCc-EEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-----Cch
Confidence            799999999999999999954 55555543221  111  101         12228999999999999988     899


Q ss_pred             EEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      -+.|.++.+    +...+.++.+.+.+++..|++++++++.-+=.++.++..-||+.-+......+              
T Consensus        81 EIYNLaAQS----~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~p--------------  142 (345)
T COG1089          81 EIYNLAAQS----HVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIP--------------  142 (345)
T ss_pred             hheeccccc----cccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCc--------------
Confidence            999999876    33455566778999999999999998854334456777766644332111111              


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCc
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGY  211 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~  211 (230)
                                     -++.-|+.|.++|+++|..-.-++..+...++..... ||-.|+=+|.-
T Consensus       143 ---------------q~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~Acn-GILFNHESP~R  190 (345)
T COG1089         143 ---------------QKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACN-GILFNHESPLR  190 (345)
T ss_pred             ---------------cccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeec-ceeecCCCCCC
Confidence                           1334577888999999999888888888888876665 78888777764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.88  E-value=2.4e-08  Score=93.70  Aligned_cols=99  Identities=19%  Similarity=0.133  Sum_probs=72.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||+++++.|.++|. .|...               ..|++|.+.+..++.+.     ++|+|||+|+......
T Consensus       385 VtGa~G~iG~~l~~~L~~~g~-~v~~~---------------~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~~  443 (668)
T PLN02260        385 IYGRTGWIGGLLGKLCEKQGI-AYEYG---------------KGRLEDRSSLLADIRNV-----KPTHVFNAAGVTGRPN  443 (668)
T ss_pred             EECCCchHHHHHHHHHHhCCC-eEEee---------------ccccccHHHHHHHHHhh-----CCCEEEECCcccCCCC
Confidence            799999999999999999854 44211               14678888888887764     7999999999753211


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                       .+..++.....+++|+.++..+++++..   .+.++|++||..
T Consensus       444 -~~~~~~~~~~~~~~N~~gt~~l~~a~~~---~g~~~v~~Ss~~  483 (668)
T PLN02260        444 -VDWCESHKVETIRANVVGTLTLADVCRE---NGLLMMNFATGC  483 (668)
T ss_pred             -CChHHhCHHHHHHHHhHHHHHHHHHHHH---cCCeEEEEcccc
Confidence             1223345678899999999999999853   233566776643

>PLN02996 fatty acyl-CoA reductase

Probab=98.82  E-value=1.7e-07  Score=84.85  Aligned_cols=113  Identities=19%  Similarity=0.162  Sum_probs=75.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC--CeEEEEecCcch--hH-HHHHh-----------------h-----h-----cccCC-
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD--GIIYLTARDASR--GQ-EALEK-----------------L-----Q-----KLDIL-   47 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~--~~vi~~~r~~~~--~~-~~~~~-----------------~-----~-----~~D~s-   47 (230)
                      ||||+|.||+.++..|++.+.  ..|++..|....  .. ....+                 +     .     .+|++ 
T Consensus        16 vTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~   95 (491)
T PLN02996         16 VTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISY   95 (491)
T ss_pred             EeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCC
Confidence            799999999999999997633  367888886531  11 11001                 0     0     15776 


Q ss_pred             ------CHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          48 ------DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        48 ------~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                            +.+.++.+++       .+|+|||+|+....       .+..+..+++|+.|+..+++++... ..-.++|++|
T Consensus        96 ~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~k~~V~vS  160 (491)
T PLN02996         96 DDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-------DERYDVALGINTLGALNVLNFAKKC-VKVKMLLHVS  160 (491)
T ss_pred             cCCCCChHHHHHHHHh-------CCCEEEECccccCC-------cCCHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEe
Confidence                  3333444443       69999999997531       1346778999999999999987532 1224899999


Q ss_pred             CCCcccc
Q psy7994         122 SSCGHLC  128 (230)
Q Consensus       122 S~~~~~~  128 (230)
                      |...+.+
T Consensus       161 T~~vyG~  167 (491)
T PLN02996        161 TAYVCGE  167 (491)
T ss_pred             eeEEecC
Confidence            8776543

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.78  E-value=6.8e-08  Score=80.93  Aligned_cols=97  Identities=11%  Similarity=0.067  Sum_probs=65.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||.++++.|+++ +..|+.++|+.......... .-.|+.. ..       ..+.+..+|+|||+||..... 
T Consensus         3 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~-~~~~~~~-~~-------~~~~~~~~D~Vvh~a~~~~~~-   71 (292)
T TIGR01777         3 ITGGTGFIGRALTQRLTKD-GHEVTILTRSPPAGANTKWE-GYKPWAP-LA-------ESEALEGADAVINLAGEPIAD-   71 (292)
T ss_pred             EEcccchhhHHHHHHHHHc-CCEEEEEeCCCCCCCcccce-eeecccc-cc-------hhhhcCCCCEEEECCCCCccc-
Confidence            7999999999999999999 56888888877654322111 1112222 11       122335799999999974321 


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcc
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFP  109 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  109 (230)
                       ...+.+..+..+++|+.++..+++++..
T Consensus        72 -~~~~~~~~~~~~~~n~~~~~~l~~a~~~   99 (292)
T TIGR01777        72 -KRWTEERKQEIRDSRIDTTRALVEAIAA   99 (292)
T ss_pred             -ccCCHHHHHHHHhcccHHHHHHHHHHHh
Confidence             1234455667889999999999998853

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.76  E-value=6.4e-08  Score=82.91  Aligned_cols=173  Identities=20%  Similarity=0.207  Sum_probs=107.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc------hhHHHHHhhh-------c------ccCCC------HHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS------RGQEALEKLQ-------K------LDILD------KNSIKAL   55 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~------~~~~~~~~~~-------~------~D~s~------~~~v~~~   55 (230)
                      +|||+|.+|..+..+|..+-...|+...|.++      +++.......       +      .|++.      ....+.+
T Consensus         5 LTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~L   84 (382)
T COG3320           5 LTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQEL   84 (382)
T ss_pred             EecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHH
Confidence            59999999999999999986667887777554      2222222100       0      56652      2233333


Q ss_pred             HHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHH
Q psy7994          56 HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEAL  135 (230)
Q Consensus        56 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~  135 (230)
                      ++       .+|.||||+...+.       .....+....|+.|+..+++.+..  -+...+.++||++..-..... ..
T Consensus        85 a~-------~vD~I~H~gA~Vn~-------v~pYs~L~~~NVlGT~evlrLa~~--gk~Kp~~yVSsisv~~~~~~~-~~  147 (382)
T COG3320          85 AE-------NVDLIIHNAALVNH-------VFPYSELRGANVLGTAEVLRLAAT--GKPKPLHYVSSISVGETEYYS-NF  147 (382)
T ss_pred             hh-------hcceEEecchhhcc-------cCcHHHhcCcchHhHHHHHHHHhc--CCCceeEEEeeeeeccccccC-CC
Confidence            33       69999999998531       234567889999999999997742  233458899987763221111 00


Q ss_pred             HHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         136 KKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                       -..++  ...++...+.....+|+.||.+.+.+++.    -...    |+++..+-||++-.+
T Consensus       148 -----------------~~~~~--~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~----A~~r----GLpv~I~Rpg~I~gd  200 (382)
T COG3320         148 -----------------TVDFD--EISPTRNVGQGLAGGYGRSKWVAEKLVRE----AGDR----GLPVTIFRPGYITGD  200 (382)
T ss_pred             -----------------ccccc--cccccccccCccCCCcchhHHHHHHHHHH----Hhhc----CCCeEEEecCeeecc
Confidence                             00000  11112222334459999999999998854    3333    566888999998555


Q ss_pred             CC
Q psy7994         216 MS  217 (230)
Q Consensus       216 ~~  217 (230)
                      -.
T Consensus       201 s~  202 (382)
T COG3320         201 SR  202 (382)
T ss_pred             Cc
Confidence            43

>PRK05865 hypothetical protein; Provisional

Probab=98.75  E-value=3.1e-08  Score=94.09  Aligned_cols=101  Identities=24%  Similarity=0.261  Sum_probs=74.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||+++++.|+++ +..|+.++|+..........+..+|++|.+++.++++       .+|+|||+|+...+  
T Consensus         5 VTGATGfIGs~La~~Ll~~-G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al~-------~vD~VVHlAa~~~~--   74 (854)
T PRK05865          5 VTGASGVLGRGLTARLLSQ-GHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMT-------GADVVAHCAWVRGR--   74 (854)
T ss_pred             EECCCCHHHHHHHHHHHHC-cCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHHh-------CCCEEEECCCcccc--
Confidence            7999999999999999999 5577777776432111011233489999999888775       58999999986421  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                 .+++|+.++..+++++..  ...++||++||..
T Consensus        75 -----------~~~vNv~GT~nLLeAa~~--~gvkr~V~iSS~~  105 (854)
T PRK05865         75 -----------NDHINIDGTANVLKAMAE--TGTGRIVFTSSGH  105 (854)
T ss_pred             -----------hHHHHHHHHHHHHHHHHH--cCCCeEEEECCcH
Confidence                       468899999998887742  1235899999863

>KOG1430|consensus

Probab=98.74  E-value=9.6e-08  Score=82.25  Aligned_cols=171  Identities=20%  Similarity=0.152  Sum_probs=113.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCcc--hhHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDAS--RGQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~~--~~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|.+|.+++..|.+++ ...|.+.+..+.  .......       +..++|+.|..++...++       +. .+|
T Consensus         9 VtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------~~-~Vv   80 (361)
T KOG1430|consen    9 VTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------GA-VVV   80 (361)
T ss_pred             EECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------Cc-eEE
Confidence            79999999999999999997 467777777654  2222211       111278888888887775       56 788


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+|....+.-    -..+.+..+++|+.|+..+++.+..  ..-.++|++||....+....                   
T Consensus        81 h~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c~~--~~v~~lIYtSs~~Vvf~g~~-------------------  135 (361)
T KOG1430|consen   81 HCAASPVPDF----VENDRDLAMRVNVNGTLNVIEACKE--LGVKRLIYTSSAYVVFGGEP-------------------  135 (361)
T ss_pred             EeccccCccc----cccchhhheeecchhHHHHHHHHHH--hCCCEEEEecCceEEeCCee-------------------
Confidence            8887653322    1224677899999999999998853  12259999999887654332                   


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                             ....+++..++......|+.||+--+.+.+....      . .++...++-|-.|=.|..+
T Consensus       136 -------~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~------~-~~l~T~aLR~~~IYGpgd~  189 (361)
T KOG1430|consen  136 -------IINGDESLPYPLKHIDPYGESKALAEKLVLEANG------S-DDLYTCALRPPGIYGPGDK  189 (361)
T ss_pred             -------cccCCCCCCCccccccccchHHHHHHHHHHHhcC------C-CCeeEEEEccccccCCCCc
Confidence                   1223334344433336999999988887754332      1 1466777777666555433

>KOG1429|consensus

Probab=98.74  E-value=2e-08  Score=82.69  Aligned_cols=157  Identities=17%  Similarity=0.142  Sum_probs=106.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhh--hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKL--QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~--~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|.||++++..|..+| +.|+..+- .........--+  ..+++.-.+-+..++.       .+|-++|.|....
T Consensus        32 itGgaGFIgSHLvdkLm~eg-h~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~-------evD~IyhLAapas  103 (350)
T KOG1429|consen   32 ITGGAGFIGSHLVDKLMTEG-HEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLK-------EVDQIYHLAAPAS  103 (350)
T ss_pred             EecCcchHHHHHHHHHHhcC-CeEEEEecccccchhhcchhccCcceeEEEeechhHHHH-------HhhhhhhhccCCC
Confidence            79999999999999999996 55555544 333333221111  1267777777777776       5789999998875


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      +..+...    ..+++.+|+.++..++..+.   +-+.|++..|+...+..|.         .++.++...         
T Consensus       104 p~~y~~n----pvktIktN~igtln~lglak---rv~aR~l~aSTseVYgdp~---------~hpq~e~yw---------  158 (350)
T KOG1429|consen  104 PPHYKYN----PVKTIKTNVIGTLNMLGLAK---RVGARFLLASTSEVYGDPL---------VHPQVETYW---------  158 (350)
T ss_pred             CcccccC----ccceeeecchhhHHHHHHHH---HhCceEEEeecccccCCcc---------cCCCccccc---------
Confidence            5443333    35688999999999998774   3447899998877766543         222221100         


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                            ....+-.+...|...|...+.|+..+.++.+-.
T Consensus       159 ------g~vnpigpr~cydegKr~aE~L~~~y~k~~giE  191 (350)
T KOG1429|consen  159 ------GNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIE  191 (350)
T ss_pred             ------cccCcCCchhhhhHHHHHHHHHHHHhhcccCcE
Confidence                  001233456899999999999999998887765

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.70  E-value=1.7e-07  Score=73.33  Aligned_cols=99  Identities=23%  Similarity=0.255  Sum_probs=71.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+||+|.+|+.++++|.++ +..|....|++++.+. ..  ++..+|+.|++++.+.+.       +.|++|+++|....
T Consensus         3 V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    3 VFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAAGPPPK   73 (183)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECCHSTTT
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc-ccccccceeeehhhhhhhhhhh-------hcchhhhhhhhhcc
Confidence            6899999999999999999 4899999999998876 22  222389999988888776       79999999986421


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccc
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHL  127 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~  127 (230)
                              +         ....-.+++++..  ..-.++|++|+.....
T Consensus        74 --------~---------~~~~~~~~~a~~~--~~~~~~v~~s~~~~~~  103 (183)
T PF13460_consen   74 --------D---------VDAAKNIIEAAKK--AGVKRVVYLSSAGVYR  103 (183)
T ss_dssp             --------H---------HHHHHHHHHHHHH--TTSSEEEEEEETTGTT
T ss_pred             --------c---------ccccccccccccc--cccccceeeeccccCC
Confidence                    1         2233333333321  1235899999877644

...

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.63  E-value=1.9e-06  Score=79.42  Aligned_cols=112  Identities=15%  Similarity=0.145  Sum_probs=75.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC--CeEEEEecCcchh--H-HHHHhh---------------------------hcccCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD--GIIYLTARDASRG--Q-EALEKL---------------------------QKLDILD   48 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~--~~vi~~~r~~~~~--~-~~~~~~---------------------------~~~D~s~   48 (230)
                      ||||+|.||+.+++.|++.+.  ..|+++.|.....  . ...+++                           ...|+++
T Consensus       124 VTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d  203 (605)
T PLN02503        124 ITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCE  203 (605)
T ss_pred             EcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCC
Confidence            799999999999999998743  3688888854321  1 111111                           1168887


Q ss_pred             HH------HHHHHHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          49 KN------SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        49 ~~------~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      ++      ..+.+.+       .+|+|||+|+....       .+..+..+++|+.|+..+++.+... ..-.++|++||
T Consensus       204 ~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~-~~lk~fV~vST  268 (605)
T PLN02503        204 SNLGLEPDLADEIAK-------EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC-KKLKLFLQVST  268 (605)
T ss_pred             cccCCCHHHHHHHHh-------cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEEccC
Confidence            62      3333332       69999999998531       1446778999999999999987532 12247899888


Q ss_pred             CCccc
Q psy7994         123 SCGHL  127 (230)
Q Consensus       123 ~~~~~  127 (230)
                      ...+.
T Consensus       269 ayVyG  273 (605)
T PLN02503        269 AYVNG  273 (605)
T ss_pred             ceeec
Confidence            65543

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.48  E-value=6.7e-07  Score=70.19  Aligned_cols=73  Identities=18%  Similarity=0.157  Sum_probs=58.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+ |+|.++++.|+++ +..|++.+|+.++.+.....+.        .+|++|++++.++++++.+.++++|++|+.
T Consensus         5 VtGGt-G~gg~la~~L~~~-G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~   82 (177)
T PRK08309          5 VIGGT-GMLKRVSLWLCEK-GFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAW   82 (177)
T ss_pred             EECcC-HHHHHHHHHHHHC-cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence            68998 7777899999999 4577777888776665544331        279999999999999999999999999976


Q ss_pred             cCC
Q psy7994          73 AAI   75 (230)
Q Consensus        73 ag~   75 (230)
                      +=.
T Consensus        83 vh~   85 (177)
T PRK08309         83 IHS   85 (177)
T ss_pred             ccc
Confidence            654

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.47  E-value=4.5e-06  Score=84.32  Aligned_cols=182  Identities=17%  Similarity=0.133  Sum_probs=103.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhc---CCeEEEEecCcchhHH---HHHh----------------hhcccCCCHHH--HHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQF---DGIIYLTARDASRGQE---ALEK----------------LQKLDILDKNS--IKALH   56 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g---~~~vi~~~r~~~~~~~---~~~~----------------~~~~D~s~~~~--v~~~~   56 (230)
                      |||++|.||.+++.+|++++   ...|+...|.......   ..+.                +..+|++++.-  -...+
T Consensus       976 vTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~ 1055 (1389)
T TIGR03443       976 LTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKW 1055 (1389)
T ss_pred             EeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHH
Confidence            69999999999999999985   3577888886543221   1111                11267764420  01122


Q ss_pred             HHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHH
Q psy7994          57 DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALK  136 (230)
Q Consensus        57 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~  136 (230)
                      +++.   ..+|++||||+....    .   ..+......|+.|+..+++.+...  +..+++++||.+.+........ .
T Consensus      1056 ~~l~---~~~d~iiH~Aa~~~~----~---~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~~~~~~-~ 1122 (1389)
T TIGR03443      1056 SDLT---NEVDVIIHNGALVHW----V---YPYSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTEYYVNL-S 1122 (1389)
T ss_pred             HHHH---hcCCEEEECCcEecC----c---cCHHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCcccccch-h
Confidence            2222   369999999997531    1   223445568999999999987532  2358999999866432110000 0


Q ss_pred             HHhhhhchhHHHHHHHHHHHHHHhhcCC-CcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         137 KKLLHEIKSVEELSALMNEFVELAQDGS-HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                      .......         ...   ...+.. ..........|+.||.+.+.+++.++.    .    |+.+..+.||.+-.+
T Consensus      1123 ~~~~~~~---------~~~---~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~----g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443      1123 DELVQAG---------GAG---IPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----R----GLRGCIVRPGYVTGD 1182 (1389)
T ss_pred             hhhhhcc---------CCC---CCcccccccccccCCCChHHHHHHHHHHHHHHHh----C----CCCEEEECCCccccC
Confidence            0000000         000   000000 000111235799999999998865432    2    466888999988554

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1202|consensus

Probab=98.46  E-value=4.1e-07  Score=86.79  Aligned_cols=163  Identities=15%  Similarity=0.159  Sum_probs=124.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH---HHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA---LEKLQK---------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~---~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      |+||=||.|.+++..|..+|...+++++|+.-+.--.   ....+.         -|++..+...+++++..+ .+.+-.
T Consensus      1773 i~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k-l~~vGG 1851 (2376)
T KOG1202|consen 1773 IVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK-LGPVGG 1851 (2376)
T ss_pred             EeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh-cccccc
Confidence            6899999999999999999999999999986543211   112221         688888888888887644 578999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ++|.|.+..+.-+++.+++.|++.-+..+.|+.++-+.-......=.-+|.+||+..                       
T Consensus      1852 iFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvsc----------------------- 1908 (2376)
T KOG1202|consen 1852 IFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSC----------------------- 1908 (2376)
T ss_pred             hhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecc-----------------------
Confidence            999999988888999999999999999999999987766433333346777787765                       


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV  212 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v  212 (230)
                                       -+|..++..|+.+.++++-++.-.+.+        |+.=.+|+.|.+
T Consensus      1909 -----------------GRGN~GQtNYG~aNS~MERiceqRr~~--------GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1909 -----------------GRGNAGQTNYGLANSAMERICEQRRHE--------GFPGTAIQWGAI 1947 (2376)
T ss_pred             -----------------cCCCCcccccchhhHHHHHHHHHhhhc--------CCCcceeeeecc
Confidence                             346678899999999999998443222        333456777766

>PRK12320 hypothetical protein; Provisional

Probab=98.43  E-value=6.4e-07  Score=83.63  Aligned_cols=101  Identities=17%  Similarity=0.213  Sum_probs=69.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||.+++++|.++ ++.|+.++|.........-++..+|+++.. +.+++       .++|+|||+++....  
T Consensus         5 VTGAaGFIGs~La~~Ll~~-G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~-l~~al-------~~~D~VIHLAa~~~~--   73 (699)
T PRK12320          5 VTDATGAVGRSVTRQLIAA-GHTVSGIAQHPHDALDPRVDYVCASLRNPV-LQELA-------GEADAVIHLAPVDTS--   73 (699)
T ss_pred             EECCCCHHHHHHHHHHHhC-CCEEEEEeCChhhcccCCceEEEccCCCHH-HHHHh-------cCCCEEEEcCccCcc--
Confidence            7999999999999999999 457777777544321111123347998873 33333       268999999986311  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                            +    ...+|+.++..+++++..   .+.++|++||..+
T Consensus        74 ------~----~~~vNv~Gt~nLleAA~~---~GvRiV~~SS~~G  105 (699)
T PRK12320         74 ------A----PGGVGITGLAHVANAAAR---AGARLLFVSQAAG  105 (699)
T ss_pred             ------c----hhhHHHHHHHHHHHHHHH---cCCeEEEEECCCC
Confidence                  1    125799999999998842   3348999998754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.43  E-value=2.2e-06  Score=76.81  Aligned_cols=123  Identities=14%  Similarity=0.018  Sum_probs=85.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      |+||++|+|.+++..|... +..|+.+.+.+.+.                        ......+++.+|.-+...    
T Consensus        43 l~~~~~g~~~~~~~~~~~~-g~~v~~~~~~~~~~------------------------~~~~~~~~~~~~~d~~~~----   93 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGL-GYDVVANNDGGLTW------------------------AAGWGDRFGALVFDATGI----   93 (450)
T ss_pred             EEccCchhHHHHHHHHhhC-CCeeeecCcccccc------------------------ccCcCCcccEEEEECCCC----
Confidence            4688899999999999888 55666555443311                        000112566555433221    


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                         .+.++        +.+.+.+++..++.|.+.|+||+++|..+..                                 
T Consensus        94 ---~~~~~--------l~~~~~~~~~~l~~l~~~griv~i~s~~~~~---------------------------------  129 (450)
T PRK08261         94 ---TDPAD--------LKALYEFFHPVLRSLAPCGRVVVLGRPPEAA---------------------------------  129 (450)
T ss_pred             ---CCHHH--------HHHHHHHHHHHHHhccCCCEEEEEccccccC---------------------------------
Confidence               12222        2355577888888888889999999876621                                 


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCc
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGY  211 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~  211 (230)
                                +...|+.+|+++.++++++++|+ ..    +++++.|.|++
T Consensus       130 ----------~~~~~~~akaal~gl~rsla~E~-~~----gi~v~~i~~~~  165 (450)
T PRK08261        130 ----------ADPAAAAAQRALEGFTRSLGKEL-RR----GATAQLVYVAP  165 (450)
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHh-hc----CCEEEEEecCC
Confidence                      22569999999999999999999 54    68899999986

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.43  E-value=3.5e-07  Score=74.72  Aligned_cols=96  Identities=17%  Similarity=0.137  Sum_probs=60.3

Q ss_pred             CCCCC-CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGAN-KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s-~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||+.| |+||+++++.|+++| +.|+++++........   ...+.+...++.+.+.+.+.+.++.+|+||||||+....
T Consensus        20 itN~SSG~iG~aLA~~L~~~G-~~V~li~r~~~~~~~~---~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~~   95 (229)
T PRK06732         20 ITNHSTGQLGKIIAETFLAAG-HEVTLVTTKTAVKPEP---HPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDYT   95 (229)
T ss_pred             ecCccchHHHHHHHHHHHhCC-CEEEEEECcccccCCC---CCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCce
Confidence            46555 559999999999995 4666666543211100   011122222334444444444556899999999997655


Q ss_pred             CCCCCChhHHHHHHHHhhhhH
Q psy7994          80 NSSEPFGSQALHTMRTNYFAL  100 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~  100 (230)
                      +....+.+.|.+++++|.+..
T Consensus        96 ~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         96 PVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             ehhhhhhhhhhhhhhhhhhhc
Confidence            566667788888988876654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.42  E-value=7.4e-07  Score=74.84  Aligned_cols=73  Identities=18%  Similarity=0.125  Sum_probs=55.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCC-CcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGG-VDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~-id~lv~~ag~   75 (230)
                      ||||+|.+|+.++++|.++ +..|....|++++......+...+|+.|++++..+++.. +.... +|.++++++.
T Consensus         4 VtGatG~iG~~vv~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~~~~~   77 (285)
T TIGR03649         4 LTGGTGKTASRIARLLQAA-SVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYLVAPP   77 (285)
T ss_pred             EEcCCChHHHHHHHHHHhC-CCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcc-cCcCCceeEEEEeCCC
Confidence            7999999999999999999 567888889876543211122348999999999988643 22335 9999998874

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.27  E-value=9.5e-06  Score=66.97  Aligned_cols=115  Identities=14%  Similarity=0.167  Sum_probs=69.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|-||.+++.+|.+. ++.|+++.|++.+.......    -+...+.+....+      ..+|+|||.||......
T Consensus         3 iTGgTGlIG~~L~~~L~~~-gh~v~iltR~~~~~~~~~~~----~v~~~~~~~~~~~------~~~DavINLAG~~I~~r   71 (297)
T COG1090           3 ITGGTGLIGRALTARLRKG-GHQVTILTRRPPKASQNLHP----NVTLWEGLADALT------LGIDAVINLAGEPIAER   71 (297)
T ss_pred             EeccccchhHHHHHHHHhC-CCeEEEEEcCCcchhhhcCc----cccccchhhhccc------CCCCEEEECCCCccccc
Confidence            7999999999999999998 77888888887765543221    1111222222221      17999999999863211


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccc
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCH  129 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~  129 (230)
                        -++.+.=+.+++.-+..+-.+.+.+.. .+++.++.+-+|..|++.+
T Consensus        72 --rWt~~~K~~i~~SRi~~T~~L~e~I~~-~~~~P~~~isaSAvGyYG~  117 (297)
T COG1090          72 --RWTEKQKEEIRQSRINTTEKLVELIAA-SETKPKVLISASAVGYYGH  117 (297)
T ss_pred             --cCCHHHHHHHHHHHhHHHHHHHHHHHh-ccCCCcEEEecceEEEecC
Confidence              134444445555555555555554432 2344555556666666643

>KOG1221|consensus

Probab=98.25  E-value=3.2e-06  Score=74.98  Aligned_cols=111  Identities=23%  Similarity=0.307  Sum_probs=74.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhc--CCeEEEEecCcch--hHHHHH-h--------hhc-------------ccCCCHH----
Q psy7994           1 VTGANKGIGYGIVKGLIQQF--DGIIYLTARDASR--GQEALE-K--------LQK-------------LDILDKN----   50 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g--~~~vi~~~r~~~~--~~~~~~-~--------~~~-------------~D~s~~~----   50 (230)
                      ||||+|.+|+.+...|+.--  -.++++.-|....  .++..+ .        +.+             +|+++++    
T Consensus        17 vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis   96 (467)
T KOG1221|consen   17 VTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGIS   96 (467)
T ss_pred             EEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCC
Confidence            79999999999999999863  2367777775432  111111 1        111             5665443    


Q ss_pred             --HHHHHHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc
Q psy7994          51 --SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        51 --~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                        +++.+.       ..+|+|||+|+..       -..|..+..+.+|..|+..+.+.+.. |.+-...+.+|+....
T Consensus        97 ~~D~~~l~-------~eV~ivih~AAtv-------rFde~l~~al~iNt~Gt~~~l~lak~-~~~l~~~vhVSTAy~n  159 (467)
T KOG1221|consen   97 ESDLRTLA-------DEVNIVIHSAATV-------RFDEPLDVALGINTRGTRNVLQLAKE-MVKLKALVHVSTAYSN  159 (467)
T ss_pred             hHHHHHHH-------hcCCEEEEeeeee-------ccchhhhhhhhhhhHhHHHHHHHHHH-hhhhheEEEeehhhee
Confidence              222222       2799999999974       23466788899999999999997753 3334577888876664

>KOG0747|consensus

Probab=98.16  E-value=3.9e-06  Score=69.36  Aligned_cols=158  Identities=16%  Similarity=0.092  Sum_probs=101.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEec-C----cchhHHHHH----hhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTAR-D----ASRGQEALE----KLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r-~----~~~~~~~~~----~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|.||...+..+...-.. +.+.++. .    ...+++...    .+.+.|+.+...+.-++..     .++|.|+
T Consensus        11 Itgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~~id~vi   85 (331)
T KOG0747|consen   11 ITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----EEIDTVI   85 (331)
T ss_pred             EecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhcc-----Cchhhhh
Confidence            7999999999999999987322 3333322 1    111111111    1223788888887777653     5899999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |.|....-    +.+.-+--.....|++++..+.+...... +-.++|++|+...+......                  
T Consensus        86 hfaa~t~v----d~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~~~------------------  142 (331)
T KOG0747|consen   86 HFAAQTHV----DRSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSDED------------------  142 (331)
T ss_pred             hhHhhhhh----hhhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCcccc------------------
Confidence            99987521    11111223456789999999998885432 23589999987775532111                  


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                               ... .+....-|-.+|+++|+|.+++.+++.+.++-.
T Consensus       143 ---------~~~-~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~lp  178 (331)
T KOG0747|consen  143 ---------AVV-GEASLLNPTNPYAASKAAAEMLVRSYGRSYGLP  178 (331)
T ss_pred             ---------ccc-cccccCCCCCchHHHHHHHHHHHHHHhhccCCc
Confidence                     000 012233455899999999999999999988765

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.10  E-value=5.7e-06  Score=72.86  Aligned_cols=69  Identities=13%  Similarity=0.173  Sum_probs=49.2

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||++|+++|+.|+++ |..|++++++.+ ++. ...+..+|+++.+++.+.+.   +.++++|++|||||+....
T Consensus       213 SG~~G~aiA~~l~~~-Ga~V~~v~~~~~-~~~-~~~~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        213 SGKMGYALARAAARR-GADVTLVSGPVN-LPT-PAGVKRIDVESAQEMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             cchHHHHHHHHHHHC-CCEEEEeCCCcc-ccC-CCCcEEEccCCHHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence            455999999999999 556666666542 111 11233479998888777766   4578999999999987543

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.90  E-value=0.00032  Score=63.86  Aligned_cols=172  Identities=20%  Similarity=0.134  Sum_probs=107.3

Q ss_pred             CCCCC-CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-------------ccCCCHHHHHHHHHHHHhhcC--
Q psy7994           1 VTGAN-KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------------LDILDKNSIKALHDHLEAEHG--   64 (230)
Q Consensus         1 ItG~s-~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-------------~D~s~~~~v~~~~~~~~~~~~--   64 (230)
                      |||++ +.||.+++..|++.|..+|+.++|-.....+..+.+-.             ++..+-.+++.+++.|-++..  
T Consensus       401 VTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~~t  480 (866)
T COG4982         401 VTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQTET  480 (866)
T ss_pred             EecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccccccc
Confidence            79999 88999999999998655555566644444444433321             678888888888888865432  


Q ss_pred             ------------CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-----ceEEEecCCCccc
Q psy7994          65 ------------GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-----GRVVNVSSSCGHL  127 (230)
Q Consensus        65 ------------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-----g~ii~~sS~~~~~  127 (230)
                                  .+|.+|=-|.....+.+.+.. ..-+..+++.+.+..+++-.+.++-..+     ..+|...|.-.  
T Consensus       481 ~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~ag-sraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPNr--  557 (866)
T COG4982         481 VGPQSIHIKLAWTPTLLFPFAAPRVSGELADAG-SRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPNR--  557 (866)
T ss_pred             cCCcceecccccCcceeeecccCCccCccccCC-chHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCCC--
Confidence                        356677666655444444333 3345566777777777766655433222     35666655322  


Q ss_pred             cccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHh--hhhhhccCCeEEE
Q psy7994         128 CHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHAL--LSQDAIREDLVVN  205 (230)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~--~~~~~~~~~i~v~  205 (230)
                                                             .-+.+...|+.+|++++.+..-+..|  |+.+     +.+.
T Consensus       558 ---------------------------------------G~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~-----vsl~  593 (866)
T COG4982         558 ---------------------------------------GMFGGDGAYGESKLALDAVVNRWHSESSWAAR-----VSLA  593 (866)
T ss_pred             ---------------------------------------CccCCCcchhhHHHHHHHHHHHhhccchhhHH-----HHHh
Confidence                                                   11234589999999999988766655  4444     3444


Q ss_pred             EecCCcc-ccCCCCC
Q psy7994         206 CVHPGYV-NTDMSSG  219 (230)
Q Consensus       206 ~v~pG~v-~t~~~~~  219 (230)
                      ...-||+ .|.++.+
T Consensus       594 ~A~IGWtrGTGLMg~  608 (866)
T COG4982         594 HALIGWTRGTGLMGH  608 (866)
T ss_pred             hhheeeeccccccCC
Confidence            5556777 4555544

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.87  E-value=3.8e-05  Score=64.99  Aligned_cols=69  Identities=25%  Similarity=0.292  Sum_probs=51.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc---chhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA---SRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~---~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      |||+ ||+|++++..|++.|...|++.+|+.   +++++..+++..         +|+++.++++..++       ..|+
T Consensus       131 I~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~-------~~Di  202 (289)
T PRK12548        131 VIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA-------SSDI  202 (289)
T ss_pred             EECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-------cCCE
Confidence            6888 69999999999999777899999987   566666555432         56666666555443       5699


Q ss_pred             EEEccCCcc
Q psy7994          69 LVNNAAIAF   77 (230)
Q Consensus        69 lv~~ag~~~   77 (230)
                      ||||.....
T Consensus       203 lINaTp~Gm  211 (289)
T PRK12548        203 LVNATLVGM  211 (289)
T ss_pred             EEEeCCCCC
Confidence            999987653

>PLN00016 RNA-binding protein; Provisional

Probab=97.85  E-value=6.7e-05  Score=65.73  Aligned_cols=95  Identities=21%  Similarity=0.189  Sum_probs=58.3

Q ss_pred             CC----CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH-------HHhh-------hcccCCCHHHHHHHHHHHHhh
Q psy7994           1 VT----GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA-------LEKL-------QKLDILDKNSIKALHDHLEAE   62 (230)
Q Consensus         1 It----G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~-------~~~~-------~~~D~s~~~~v~~~~~~~~~~   62 (230)
                      ||    ||+|.||..++++|+++ ++.|+++.|+.......       ..++       ..+|+.|   +..++.     
T Consensus        57 Vt~~~~GatG~iG~~lv~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~-----  127 (378)
T PLN00016         57 IVNTNSGGHAFIGFYLAKELVKA-GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA-----  127 (378)
T ss_pred             EEeccCCCceeEhHHHHHHHHHC-CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc-----
Confidence            68    99999999999999999 56788888876542211       0111       1145544   333332     


Q ss_pred             cCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCCccc
Q psy7994          63 HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSCGHL  127 (230)
Q Consensus        63 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~~~~  127 (230)
                      ..++|+|||+++..                    +.++..+++++.   +.+ .++|++||...+.
T Consensus       128 ~~~~d~Vi~~~~~~--------------------~~~~~~ll~aa~---~~gvkr~V~~SS~~vyg  170 (378)
T PLN00016        128 GAGFDVVYDNNGKD--------------------LDEVEPVADWAK---SPGLKQFLFCSSAGVYK  170 (378)
T ss_pred             cCCccEEEeCCCCC--------------------HHHHHHHHHHHH---HcCCCEEEEEccHhhcC
Confidence            13799999987631                    112334455442   122 4899999976543

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.81  E-value=2.9e-05  Score=68.19  Aligned_cols=97  Identities=11%  Similarity=0.123  Sum_probs=59.8

Q ss_pred             CCc-HHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhhhcccCCCHHHH-HHHHHHHHhhcCCCcEEEEccCCccccCC
Q psy7994           5 NKG-IGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKLQKLDILDKNSI-KALHDHLEAEHGGVDVLVNNAAIAFKVNS   81 (230)
Q Consensus         5 s~g-iG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~~~~D~s~~~~v-~~~~~~~~~~~~~id~lv~~ag~~~~~~~   81 (230)
                      |+| +|.++++.|+.+|+ .|+++.+. .....   ..+..+|+++.+++ +++++++   ++++|++|+|||+....+.
T Consensus       209 SSG~~g~~~a~~~~~~Ga-~V~~~~g~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       209 SSGKMGLALAEAAYKRGA-DVTLITGPVSLLTP---PGVKSIKVSTAEEMLEAALNEL---AKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             CcchHHHHHHHHHHHCCC-EEEEeCCCCccCCC---CCcEEEEeccHHHHHHHHHHhh---cccCCEEEEcccccccccc
Confidence            666 99999999999955 55554443 22211   12334899999888 6566443   4689999999999765443


Q ss_pred             CCCCh--hHHHHHHHHhhhhHHHHHHHhc
Q psy7994          82 SEPFG--SQALHTMRTNYFALIDVCDILF  108 (230)
Q Consensus        82 ~~~~~--~~~~~~~~~n~~g~~~l~~~~~  108 (230)
                      ...+.  +.....+.+|+.-.-.+++.+.
T Consensus       282 ~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       282 TVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             ccccccccccCCceeEEEEeCcHHHHHHH
Confidence            22211  1112234556666656665554

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.70  E-value=0.00055  Score=56.61  Aligned_cols=104  Identities=17%  Similarity=0.115  Sum_probs=72.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh--hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK--LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~--~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||||.+|.+++++|.++ +..|....|++++.......  +...|+.+++.+...++       ++|.+++..+... 
T Consensus         5 V~GatG~~G~~~~~~L~~~-~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~-------G~~~~~~i~~~~~-   75 (275)
T COG0702           5 VTGATGFVGGAVVRELLAR-GHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAK-------GVDGVLLISGLLD-   75 (275)
T ss_pred             EEecccchHHHHHHHHHhC-CCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhc-------cccEEEEEecccc-
Confidence            7999999999999999999 77999999998877766521  12279999999888876       7899888888642 


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      ...         ..............+...   .....++.+|....
T Consensus        76 ~~~---------~~~~~~~~~~~~~a~~a~---~~~~~~~~~s~~~~  110 (275)
T COG0702          76 GSD---------AFRAVQVTAVVRAAEAAG---AGVKHGVSLSVLGA  110 (275)
T ss_pred             ccc---------chhHHHHHHHHHHHHHhc---CCceEEEEeccCCC
Confidence            110         122333444555555442   12346777776665

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.67  E-value=0.00017  Score=57.22  Aligned_cols=68  Identities=25%  Similarity=0.309  Sum_probs=53.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+||+|++|+.+++.|+++| ..|++.+|+.++++...+.+.        .+|..+.+++.+.+.       +.|+||++
T Consensus        33 VlGgtG~iG~~~a~~l~~~g-~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~diVi~a  104 (194)
T cd01078          33 VLGGTGPVGQRAAVLLAREG-ARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------GADVVFAA  104 (194)
T ss_pred             EECCCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------cCCEEEEC
Confidence            57999999999999999985 688888999888877766553        157778777766664       67999987


Q ss_pred             cCCc
Q psy7994          73 AAIA   76 (230)
Q Consensus        73 ag~~   76 (230)
                      ....
T Consensus       105 t~~g  108 (194)
T cd01078         105 GAAG  108 (194)
T ss_pred             CCCC
Confidence            7654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.60  E-value=0.00012  Score=64.35  Aligned_cols=68  Identities=28%  Similarity=0.364  Sum_probs=52.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhh-------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ-------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~-------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.|+ |.+|+.+++.|++++.. .|++.+|+.++++...+.+.       .+|+.|.+++.++++       +-|+||||
T Consensus         3 vlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVin~   74 (386)
T PF03435_consen    3 VLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVVINC   74 (386)
T ss_dssp             EE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEEEE-
T ss_pred             EEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEEEEC
Confidence            4688 99999999999999655 89999999999998876532       289999999988876       56999999


Q ss_pred             cCCc
Q psy7994          73 AAIA   76 (230)
Q Consensus        73 ag~~   76 (230)
                      +|..
T Consensus        75 ~gp~   78 (386)
T PF03435_consen   75 AGPF   78 (386)
T ss_dssp             SSGG
T ss_pred             Cccc
Confidence            9974

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG2865|consensus

Probab=97.58  E-value=0.00055  Score=57.01  Aligned_cols=106  Identities=21%  Similarity=0.283  Sum_probs=75.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHH--HHhhhc-----ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEA--LEKLQK-----LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~--~~~~~~-----~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.||+|.+|+-++.+|++. +..|++--| ++......  .-++.+     .|+.|+++++++++       .-++|||.
T Consensus        66 VFGAtGFlGryvvnklak~-GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk-------~sNVVINL  137 (391)
T KOG2865|consen   66 VFGATGFLGRYVVNKLAKM-GSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK-------HSNVVINL  137 (391)
T ss_pred             EecccccccHHHHHHHhhc-CCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH-------hCcEEEEe
Confidence            5799999999999999999 667777666 44433322  112222     89999999999998       56899999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCc--eEEEecCCCcc
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHG--RVVNVSSSCGH  126 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g--~ii~~sS~~~~  126 (230)
                      .|.-++..-.        +.-++|+.++-.+++.+    +..|  ++|.+|+..+.
T Consensus       138 IGrd~eTknf--------~f~Dvn~~~aerlAric----ke~GVerfIhvS~Lgan  181 (391)
T KOG2865|consen  138 IGRDYETKNF--------SFEDVNVHIAERLARIC----KEAGVERFIHVSCLGAN  181 (391)
T ss_pred             eccccccCCc--------ccccccchHHHHHHHHH----HhhChhheeehhhcccc
Confidence            9975432211        12367888888888766    4443  89999987764

>KOG1372|consensus

Probab=97.57  E-value=9.4e-05  Score=60.26  Aligned_cols=172  Identities=19%  Similarity=0.104  Sum_probs=109.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc----hhHHHHHh----------hhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS----RGQEALEK----------LQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~----~~~~~~~~----------~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      |||-+|-=|.-++..|+.+|+.+--++.|+..    +.+.....          +.-.|++|..++.+++..+     ++
T Consensus        33 ITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-----kP  107 (376)
T KOG1372|consen   33 ITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-----KP  107 (376)
T ss_pred             EecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-----Cc
Confidence            78999999999999999996555455555433    22222111          1118999999999999987     78


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccc-ccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL-LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~-l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      +-+.|.|..+.-.    .+-|-.+.+-++...|++.++.++... |.++-++-.-| ....+.....          ++ 
T Consensus       108 tEiYnLaAQSHVk----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAs-tSElyGkv~e----------~P-  171 (376)
T KOG1372|consen  108 TEVYNLAAQSHVK----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQAS-TSELYGKVQE----------IP-  171 (376)
T ss_pred             hhhhhhhhhcceE----EEeecccceeeccchhhhhHHHHHHhcCcccceeEEecc-cHhhcccccC----------CC-
Confidence            8888888876432    222334566778889999999988653 22333433333 2333322111          00 


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCc
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGY  211 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~  211 (230)
                                       -++.-|+.|.++|+++|..-.=++-.++..++...-+ ||..|.=+|.-
T Consensus       172 -----------------QsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcN-GILFNHESPRR  219 (376)
T KOG1372|consen  172 -----------------QSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACN-GILFNHESPRR  219 (376)
T ss_pred             -----------------cccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeec-cEeecCCCCcc
Confidence                             0223466777999999987665665666666665444 78888777763

>KOG1431|consensus

Probab=97.56  E-value=0.00049  Score=55.47  Aligned_cols=148  Identities=16%  Similarity=0.024  Sum_probs=84.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC--CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD--GIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~--~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |||++|=+|++|.+-+.++|.  .+.++.+...            +|+++.++++++++.-     ++..|||.|.... 
T Consensus         6 VtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd------------~DLt~~a~t~~lF~~e-----kPthVIhlAAmVG-   67 (315)
T KOG1431|consen    6 VTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKD------------ADLTNLADTRALFESE-----KPTHVIHLAAMVG-   67 (315)
T ss_pred             EecCCchHHHHHHHHHHhcCCCCcceEEecccc------------ccccchHHHHHHHhcc-----CCceeeehHhhhc-
Confidence            699999999999999999976  4555544332            7999999999999864     7888888886531 


Q ss_pred             cCCC--CCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          79 VNSS--EPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        79 ~~~~--~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      +-+.  ....+-|...+    .=.-++++.+...  .-.++++..|..-+-.....         |+.+.    +..+  
T Consensus        68 Glf~N~~ynldF~r~Nl----~indNVlhsa~e~--gv~K~vsclStCIfPdkt~y---------PIdEt----mvh~--  126 (315)
T KOG1431|consen   68 GLFHNNTYNLDFIRKNL----QINDNVLHSAHEH--GVKKVVSCLSTCIFPDKTSY---------PIDET----MVHN--  126 (315)
T ss_pred             chhhcCCCchHHHhhcc----eechhHHHHHHHh--chhhhhhhcceeecCCCCCC---------CCCHH----Hhcc--
Confidence            1111  12334344333    2223333333210  00123333332221111111         11100    0000  


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                               -.+-+.+..|+-+|..+.-..+.++.+.+..
T Consensus       127 ---------gpphpsN~gYsyAKr~idv~n~aY~~qhg~~  157 (315)
T KOG1431|consen  127 ---------GPPHPSNFGYSYAKRMIDVQNQAYRQQHGRD  157 (315)
T ss_pred             ---------CCCCCCchHHHHHHHHHHHHHHHHHHHhCCc
Confidence                     1123445889999988888889999888776

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.54  E-value=0.00026  Score=55.17  Aligned_cols=103  Identities=17%  Similarity=0.178  Sum_probs=74.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH-HHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA-LEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~-~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |.|+||-.|+.+.++..++ ++.|..+.|+++++... ...+.+.|+.|+.++.+.+.       ..|+||..-|...+ 
T Consensus         5 iIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~-------g~DaVIsA~~~~~~-   75 (211)
T COG2910           5 IIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLA-------GHDAVISAFGAGAS-   75 (211)
T ss_pred             EEecCchhHHHHHHHHHhC-CCeeEEEEeChHhccccccceeecccccChhhhHhhhc-------CCceEEEeccCCCC-
Confidence            5799999999999999999 77999999999988763 33466689999999877765       89999998887532 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccc
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHL  127 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~  127 (230)
                           +.+...  .        ...+.+...++.  ..|++.++..++..
T Consensus        76 -----~~~~~~--~--------k~~~~li~~l~~agv~RllVVGGAGSL~  110 (211)
T COG2910          76 -----DNDELH--S--------KSIEALIEALKGAGVPRLLVVGGAGSLE  110 (211)
T ss_pred             -----ChhHHH--H--------HHHHHHHHHHhhcCCeeEEEEcCccceE
Confidence                 111111  1        113334444454  25899998888744

>PLN00106 malate dehydrogenase

Probab=97.49  E-value=0.00066  Score=58.27  Aligned_cols=151  Identities=16%  Similarity=0.127  Sum_probs=91.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhc-------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQK-------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~-------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |||++|.+|..++..|+.++. ..++++++++.  +....++..       .++++.+++...       +...|+||++
T Consensus        23 IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~~~~i~~~~~~~d~~~~-------l~~aDiVVit   93 (323)
T PLN00106         23 VLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINTPAQVRGFLGDDQLGDA-------LKGADLVIIP   93 (323)
T ss_pred             EECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCcCceEEEEeCCCCHHHH-------cCCCCEEEEe
Confidence            689999999999999997644 47999998772  221112211       232233333333       3479999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc-ccccchHHHHHHhhhhchhHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH-LCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      ||....      +...+.+.+..|+.....+.+.+.++- . .+||+++|...- .++.                   .+
T Consensus        94 AG~~~~------~g~~R~dll~~N~~i~~~i~~~i~~~~-p-~aivivvSNPvD~~~~i-------------------~t  146 (323)
T PLN00106         94 AGVPRK------PGMTRDDLFNINAGIVKTLCEAVAKHC-P-NALVNIISNPVNSTVPI-------------------AA  146 (323)
T ss_pred             CCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHHC-C-CeEEEEeCCCccccHHH-------------------HH
Confidence            998532      224477888899888777777664322 2 245555554331 1000                   00


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                      ..-         ....+.++...|+.++.-..-|...++..+...
T Consensus       147 ~~~---------~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        147 EVL---------KKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             HHH---------HHcCCCCcceEEEEecchHHHHHHHHHHHhCCC
Confidence            000         002356677899999866666777888887765

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.47  E-value=0.00034  Score=52.34  Aligned_cols=67  Identities=12%  Similarity=0.216  Sum_probs=52.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||.|++++..|+++|...|.+++|+.++++...+.+..  +.+...+++.....       ..|+||++.+...
T Consensus        19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~-------~~DivI~aT~~~~   87 (135)
T PF01488_consen   19 GAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQ-------EADIVINATPSGM   87 (135)
T ss_dssp             SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHH-------TESEEEE-SSTTS
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHh-------hCCeEEEecCCCC
Confidence            4599999999999999888899999999999998888733  33444555554443       7899999998753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.46  E-value=0.00042  Score=59.62  Aligned_cols=109  Identities=17%  Similarity=0.138  Sum_probs=63.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC------CeEEEEecCcc--hhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD------GIIYLTARDAS--RGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~------~~vi~~~r~~~--~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      |||++|.+|.+++..|+..+-      ..|++.++++.  +++....++..      .|++...++.       +.+...
T Consensus         7 I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~-------~~l~~a   79 (325)
T cd01336           7 VTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPE-------EAFKDV   79 (325)
T ss_pred             EECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHH-------HHhCCC
Confidence            799999999999999998643      37888888653  23332222211      1222222222       223479


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      |+|||+||.....   ..+   -.+.++.|+.=.-.+.+.+.+.-.+++.+|.+|.
T Consensus        80 DiVI~tAG~~~~~---~~~---R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          80 DVAILVGAMPRKE---GME---RKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             CEEEEeCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            9999999985321   122   2556666766444444444433334566777664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.37  E-value=0.00037  Score=60.04  Aligned_cols=66  Identities=27%  Similarity=0.273  Sum_probs=50.5

Q ss_pred             CCCCCCcHHHHHHHHHHHh-cCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+|.||+.++++|+++ |...+++.+|+..++....+++...|+.+   +.       +.+...|+||++++..
T Consensus       160 VtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~---l~-------~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        160 VVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILS---LE-------EALPEADIVVWVASMP  226 (340)
T ss_pred             EEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHh---HH-------HHHccCCEEEECCcCC
Confidence            7999999999999999865 45789999999888887776664444432   22       2234799999999975

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.33  E-value=0.00061  Score=59.61  Aligned_cols=66  Identities=23%  Similarity=0.329  Sum_probs=56.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|++|+.+|..|++++...|.+.+|+.++........      .++|+.|.+.+.++++       ..|+|||++...
T Consensus         8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~-------~~d~VIn~~p~~   79 (389)
T COG1748           8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIK-------DFDLVINAAPPF   79 (389)
T ss_pred             CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHh-------cCCEEEEeCCch
Confidence            44999999999999997789999999999888876653      2389999999998887       349999999875

>KOG2774|consensus

Probab=97.30  E-value=0.0004  Score=56.26  Aligned_cols=154  Identities=18%  Similarity=0.216  Sum_probs=98.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHH--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALE--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |||+-|-+|..+|+.|-.+.+. .|++.+.-.. .+...+  -+.-.|+-|...+++++-.     .+||.+||-.....
T Consensus        49 ITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KP-p~~V~~~GPyIy~DILD~K~L~eIVVn-----~RIdWL~HfSALLS  122 (366)
T KOG2774|consen   49 ITGSLGQLGRGLASLLRYMYGSECVILSDIVKP-PANVTDVGPYIYLDILDQKSLEEIVVN-----KRIDWLVHFSALLS  122 (366)
T ss_pred             EecchHHHhHHHHHHHHHHhCCccEehhhccCC-chhhcccCCchhhhhhccccHHHhhcc-----cccceeeeHHHHHH
Confidence            7999999999999999988555 5666554322 122211  1122689999998888753     48999999877653


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      -....+     .--..++|+.|.-++++...    +..--||+-|.-|-++|.....    +.                 
T Consensus       123 AvGE~N-----VpLA~~VNI~GvHNil~vAa----~~kL~iFVPSTIGAFGPtSPRN----PT-----------------  172 (366)
T KOG2774|consen  123 AVGETN-----VPLALQVNIRGVHNILQVAA----KHKLKVFVPSTIGAFGPTSPRN----PT-----------------  172 (366)
T ss_pred             HhcccC-----CceeeeecchhhhHHHHHHH----HcCeeEeecccccccCCCCCCC----CC-----------------
Confidence            222112     22346899999999998774    3333356655555444432200    00                 


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                            ...--.+|...|+.||.-.+.+...+...|+.+
T Consensus       173 ------PdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~d  205 (366)
T KOG2774|consen  173 ------PDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVD  205 (366)
T ss_pred             ------CCeeeecCceeechhHHHHHHHHHHHHhhcCcc
Confidence                  000012345899999999999988888888774

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.22  E-value=0.0011  Score=53.90  Aligned_cols=68  Identities=26%  Similarity=0.319  Sum_probs=50.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch--hHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR--GQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~--~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|.+|+.+++.|.+. ++.|.+..|+...  .+....   ++..+|+.|++++.++++       ++|.|+++.+.
T Consensus         3 V~GatG~~G~~v~~~L~~~-~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~-------g~d~v~~~~~~   74 (233)
T PF05368_consen    3 VTGATGNQGRSVVRALLSA-GFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALK-------GVDAVFSVTPP   74 (233)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHT-------TCSEEEEESSC
T ss_pred             EECCccHHHHHHHHHHHhC-CCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHc-------CCceEEeecCc
Confidence            7899999999999999997 6788888887642  222111   123489999999988886       89999988886


Q ss_pred             c
Q psy7994          76 A   76 (230)
Q Consensus        76 ~   76 (230)
                      .
T Consensus        75 ~   75 (233)
T PF05368_consen   75 S   75 (233)
T ss_dssp             S
T ss_pred             c
Confidence            4

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.20  E-value=0.0014  Score=56.22  Aligned_cols=108  Identities=19%  Similarity=0.101  Sum_probs=69.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCcchhHHHHHhhhc-------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDASRGQEALEKLQK-------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~~~~~~~~~~~~~-------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|++|.||..++..|+.++ ...+++.++.  +++....++..       .+.+|+.+..+.+       ...|+||++
T Consensus        13 IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l-------~gaDvVVit   83 (321)
T PTZ00325         13 VLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTPAKVTGYADGELWEKAL-------RGADLVLIC   83 (321)
T ss_pred             EECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcCceEEEecCCCchHHHh-------CCCCEEEEC
Confidence            68999999999999999654 3478899883  22222222211       2344433322332       379999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      +|....      +.+.+.+.+..|+...-.+++.+.+.  .-.++|+++|...
T Consensus        84 aG~~~~------~~~tR~dll~~N~~i~~~i~~~i~~~--~~~~iviv~SNPv  128 (321)
T PTZ00325         84 AGVPRK------PGMTRDDLFNTNAPIVRDLVAAVASS--APKAIVGIVSNPV  128 (321)
T ss_pred             CCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEecCcH
Confidence            998531      12346778899998888888777432  2246777776544

>cd00704 MDH Malate dehydrogenase

Probab=97.04  E-value=0.00092  Score=57.43  Aligned_cols=109  Identities=19%  Similarity=0.191  Sum_probs=64.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC------eEEEEecCc--chhHHHHHhhhcccCCCHH-----HHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG------IIYLTARDA--SRGQEALEKLQKLDILDKN-----SIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~------~vi~~~r~~--~~~~~~~~~~~~~D~s~~~-----~v~~~~~~~~~~~~~id   67 (230)
                      |||++|.+|..++..|+.++..      .+++.++++  +.++...     .|+.|..     .+ .+-....+.+...|
T Consensus         5 IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~-----~Dl~d~~~~~~~~~-~i~~~~~~~~~~aD   78 (323)
T cd00704           5 ITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVV-----MELQDCAFPLLKGV-VITTDPEEAFKDVD   78 (323)
T ss_pred             EECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceee-----eehhhhcccccCCc-EEecChHHHhCCCC
Confidence            6899999999999999987544      389999887  4433322     2333331     00 00012223345899


Q ss_pred             EEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      +||+.||....      +.+.-.+.+..|+.=.-.+.+.+.++-.+++.+|.+|
T Consensus        79 iVVitAG~~~~------~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          79 VAILVGAFPRK------PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             EEEEeCCCCCC------cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999998532      1123344566666555555554443323455666665

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.89  E-value=0.0074  Score=51.17  Aligned_cols=95  Identities=22%  Similarity=0.310  Sum_probs=62.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+++++|.+++..+... +..|+++.++.++.+... .+..   +|..+.+..+.+.+....  .++|++++++|.. 
T Consensus       172 I~g~~~~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~i~~~g~~-  246 (342)
T cd08266         172 VHGAGSGVGSAAIQIAKLF-GATVIATAGSEDKLERAK-ELGADYVIDYRKEDFVREVRELTGK--RGVDVVVEHVGAA-  246 (342)
T ss_pred             EECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH-HcCCCeEEecCChHHHHHHHHHhCC--CCCcEEEECCcHH-
Confidence            6799999999999988888 556778888776655442 2211   455555555555443322  3799999998841 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                .++.               .++.+++.|+++++++...
T Consensus       247 ----------~~~~---------------~~~~l~~~G~~v~~~~~~~  269 (342)
T cd08266         247 ----------TWEK---------------SLKSLARGGRLVTCGATTG  269 (342)
T ss_pred             ----------HHHH---------------HHHHhhcCCEEEEEecCCC
Confidence                      1222               1234577899999987765

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG2733|consensus

Probab=96.84  E-value=0.0016  Score=55.75  Aligned_cols=68  Identities=24%  Similarity=0.276  Sum_probs=58.6

Q ss_pred             CCCCCCcHHHHHHHHHHH----hcCCeEEEEecCcchhHHHHHhhhc-------------ccCCCHHHHHHHHHHHHhhc
Q psy7994           1 VTGANKGIGYGIVKGLIQ----QFDGIIYLTARDASRGQEALEKLQK-------------LDILDKNSIKALHDHLEAEH   63 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~----~g~~~vi~~~r~~~~~~~~~~~~~~-------------~D~s~~~~v~~~~~~~~~~~   63 (230)
                      |-||||.-|.-+..++..    . +-.+.+.+|++.++++.++.+.+             ||.+|++++.+++.      
T Consensus        10 IyGASGfTG~yivee~v~~~~~~-~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak------   82 (423)
T KOG2733|consen   10 IYGASGFTGKYIVEEAVSSQVFE-GLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK------   82 (423)
T ss_pred             EEccccccceeeHHHHhhhhccc-CceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh------
Confidence            569999999999999998    4 45788999999999998877654             89999999999998      


Q ss_pred             CCCcEEEEccCCc
Q psy7994          64 GGVDVLVNNAAIA   76 (230)
Q Consensus        64 ~~id~lv~~ag~~   76 (230)
                       +-.+||||+|-.
T Consensus        83 -~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 -QARVIVNCVGPY   94 (423)
T ss_pred             -hhEEEEeccccc
Confidence             457999999974

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.81  E-value=0.0034  Score=47.61  Aligned_cols=65  Identities=17%  Similarity=0.329  Sum_probs=48.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ |++|.++++.|.+.|+..|.+.+|++++.+...+.+..    .+..+.+++          ....|+||++....
T Consensus        24 iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~Dvvi~~~~~~   92 (155)
T cd01065          24 ILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEEL----------LAEADLIINTTPVG   92 (155)
T ss_pred             EECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhc----------cccCCEEEeCcCCC
Confidence            4566 89999999999998657899999998888777666543    244433322          24799999999875

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.78  E-value=0.0085  Score=51.61  Aligned_cols=93  Identities=18%  Similarity=0.304  Sum_probs=59.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcC--CCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHG--GVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~--~id~lv~~ag~   75 (230)
                      |+||+||+|..........|+ .++.+..+.++.+ .+.++-.   +|..+++    +.+++.+..+  ++|+++.+.|.
T Consensus       148 V~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~----~~~~v~~~t~g~gvDvv~D~vG~  221 (326)
T COG0604         148 VHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLE-LLKELGADHVINYREED----FVEQVRELTGGKGVDVVLDTVGG  221 (326)
T ss_pred             EecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHH-HHHhcCCCEEEcCCccc----HHHHHHHHcCCCCceEEEECCCH
Confidence            689999999988886666655 5555555555555 4444432   5655555    3333333333  59999999996


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      ..           +               ...+..++++|+++.+....+
T Consensus       222 ~~-----------~---------------~~~l~~l~~~G~lv~ig~~~g  245 (326)
T COG0604         222 DT-----------F---------------AASLAALAPGGRLVSIGALSG  245 (326)
T ss_pred             HH-----------H---------------HHHHHHhccCCEEEEEecCCC
Confidence            31           1               112334577799999988775

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.74  E-value=0.0048  Score=53.07  Aligned_cols=110  Identities=19%  Similarity=0.160  Sum_probs=64.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC------eEEEEecCcch--hHHHHHhhhcccCCCHHHHH--HHH--HHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG------IIYLTARDASR--GQEALEKLQKLDILDKNSIK--ALH--DHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~------~vi~~~r~~~~--~~~~~~~~~~~D~s~~~~v~--~~~--~~~~~~~~~id~   68 (230)
                      |+|++|.+|.+++..|+.++-.      .+++.++.+..  ++...     .|+.|.....  ...  ....+.+...|+
T Consensus         4 IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~-----~Dl~d~~~~~~~~~~~~~~~~~~~~~aDi   78 (324)
T TIGR01758         4 VTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVV-----MELMDCAFPLLDGVVPTHDPAVAFTDVDV   78 (324)
T ss_pred             EECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeE-----eehhcccchhcCceeccCChHHHhCCCCE
Confidence            6899999999999999986544      48889886543  33332     3443333100  000  011233458999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      ||++||....      +.+.+.+.+..|+.=.-.+.+.+.+.-.+++.||.+|
T Consensus        79 VVitAG~~~~------~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        79 AILVGAFPRK------EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             EEEcCCCCCC------CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            9999998532      1233566667676655555555543322345566555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK09620 hypothetical protein; Provisional

Probab=96.65  E-value=0.0033  Score=51.37  Aligned_cols=74  Identities=20%  Similarity=0.142  Sum_probs=38.9

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||.||+++|++|.++|+.++++.+............+....+....++...+.++... .++|+|||+|+.....
T Consensus        28 SGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~~~-~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         28 KGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSIITH-EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             cCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHhcc-cCCCEEEECcccccee
Confidence            4899999999999996644444432221111110111111222222333333333221 2689999999997543

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.62  E-value=0.002  Score=48.61  Aligned_cols=114  Identities=15%  Similarity=0.119  Sum_probs=68.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |.|++|.+|.+++..|...+. ..++++++++++++....++..+........ .+.....+.+..-|++|.++|.... 
T Consensus         5 IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~-~i~~~~~~~~~~aDivvitag~~~~-   82 (141)
T PF00056_consen    5 IIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPV-RITSGDYEALKDADIVVITAGVPRK-   82 (141)
T ss_dssp             EESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEE-EEEESSGGGGTTESEEEETTSTSSS-
T ss_pred             EECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccc-ccccccccccccccEEEEecccccc-
Confidence            679999999999999999865 4799999998888777766654211110000 0000112233478999999998531 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                        ...   .-.+.+..|..-.-.+.+.+.++- +++.++.++.
T Consensus        83 --~g~---sR~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtN  119 (141)
T PF00056_consen   83 --PGM---SRLDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTN  119 (141)
T ss_dssp             --TTS---SHHHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SS
T ss_pred             --ccc---cHHHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCC
Confidence              112   234455666655555555554332 4567776653

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.60  E-value=0.0051  Score=52.86  Aligned_cols=157  Identities=15%  Similarity=0.047  Sum_probs=89.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC------eEEEEecCcc--hhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG------IIYLTARDAS--RGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~------~vi~~~r~~~--~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|++|.+|.+++..|+.++-.      .+++.+..++  +++....++..+-..-...+. +...-.+.+..-|++|.+
T Consensus         7 IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~~~~~~~~daDivvit   85 (322)
T cd01338           7 VTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-ITDDPNVAFKDADWALLV   85 (322)
T ss_pred             EECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-EecCcHHHhCCCCEEEEe
Confidence            6899999999999999987644      5888888543  355444444332100000000 001112334579999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ||.... +  ..   .-.+.+..|+.=.-.+.+.+.++-.+.+.+|.+|..      .+.+.                ..
T Consensus        86 aG~~~k-~--g~---tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNP------vD~~t----------------~~  137 (322)
T cd01338          86 GAKPRG-P--GM---ERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNP------CNTNA----------------LI  137 (322)
T ss_pred             CCCCCC-C--CC---cHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCc------HHHHH----------------HH
Confidence            998532 1  12   233456666655444555444333245677777632      21111                01


Q ss_pred             HHHHHHHhhcCCCcCC-CCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         153 MNEFVELAQDGSHTKG-GWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                      ...          ..| .++...|+.++.--.-|...+++.++..
T Consensus       138 ~~k----------~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~  172 (322)
T cd01338         138 AMK----------NAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVP  172 (322)
T ss_pred             HHH----------HcCCCChHheEEehHHHHHHHHHHHHHHhCcC
Confidence            111          122 5566899999988888888888887654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.59  E-value=0.014  Score=42.67  Aligned_cols=87  Identities=24%  Similarity=0.313  Sum_probs=59.3

Q ss_pred             cHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcC--CCcEEEEccCCccccCC
Q psy7994           7 GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHG--GVDVLVNNAAIAFKVNS   81 (230)
Q Consensus         7 giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~--~id~lv~~ag~~~~~~~   81 (230)
                      |||...+..+...| .+|+.+++++.+.+...+ +..   +|.++.+    +.+++.+..+  ++|++|.|+|..     
T Consensus         1 ~vG~~a~q~ak~~G-~~vi~~~~~~~k~~~~~~-~Ga~~~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~~-----   69 (130)
T PF00107_consen    1 GVGLMAIQLAKAMG-AKVIATDRSEEKLELAKE-LGADHVIDYSDDD----FVEQIRELTGGRGVDVVIDCVGSG-----   69 (130)
T ss_dssp             HHHHHHHHHHHHTT-SEEEEEESSHHHHHHHHH-TTESEEEETTTSS----HHHHHHHHTTTSSEEEEEESSSSH-----
T ss_pred             ChHHHHHHHHHHcC-CEEEEEECCHHHHHHHHh-hcccccccccccc----cccccccccccccceEEEEecCcH-----
Confidence            68888888777775 899999999888765543 322   4555544    3333444343  699999999952     


Q ss_pred             CCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          82 SEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        82 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                           +               ..+..+..++++|+++.++...
T Consensus        70 -----~---------------~~~~~~~~l~~~G~~v~vg~~~   92 (130)
T PF00107_consen   70 -----D---------------TLQEAIKLLRPGGRIVVVGVYG   92 (130)
T ss_dssp             -----H---------------HHHHHHHHEEEEEEEEEESSTS
T ss_pred             -----H---------------HHHHHHHHhccCCEEEEEEccC
Confidence                 1               2333445568899999999877

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>KOG1203|consensus

Probab=96.53  E-value=0.02  Score=50.48  Aligned_cols=111  Identities=23%  Similarity=0.281  Sum_probs=70.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH-hhhc-------ccCCCH-HHHHHHHHHHHhhcC-CCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-KLQK-------LDILDK-NSIKALHDHLEAEHG-GVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~-~~~~-------~D~s~~-~~v~~~~~~~~~~~~-~id~lv   70 (230)
                      |+||+|++|+-+++.|.++ ++.|..+.|+.++.+.... ....       .|...+ +....+++.+    + ...+++
T Consensus        84 VvGatG~vG~~iv~~llkr-gf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~----~~~~~~v~  158 (411)
T KOG1203|consen   84 VVGATGKVGRRIVKILLKR-GFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAV----PKGVVIVI  158 (411)
T ss_pred             EecCCCchhHHHHHHHHHC-CCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhc----cccceeEE
Confidence            6899999999999999999 5899999998887766654 1111       222222 2223333221    2 345667


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      -++|.-....       +...-.++.+.|...+.+++..  ..-.+++.++|+.+
T Consensus       159 ~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~~~--aGvk~~vlv~si~~  204 (411)
T KOG1203|consen  159 KGAGGRPEEE-------DIVTPEKVDYEGTKNLVDACKK--AGVKRVVLVGSIGG  204 (411)
T ss_pred             ecccCCCCcc-------cCCCcceecHHHHHHHHHHHHH--hCCceEEEEEeecC
Confidence            6776532211       2333446777888888888821  12258999998887

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.48  E-value=0.016  Score=49.79  Aligned_cols=95  Identities=15%  Similarity=0.168  Sum_probs=59.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|++|..++...... +..|+.+.+++++.+...+.+..   +|..+.+...+.+.++..  +++|+++.+.|.. 
T Consensus       157 I~Ga~G~vG~~aiqlAk~~-G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~--~gvd~v~d~~g~~-  232 (338)
T cd08295         157 VSAASGAVGQLVGQLAKLK-GCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP--NGIDIYFDNVGGK-  232 (338)
T ss_pred             EecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC--CCcEEEEECCCHH-
Confidence            6799999999988755556 55788888887776655442321   343333344444443322  4799999988741 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               .++..+..+++.|+++.++...
T Consensus       233 -------------------------~~~~~~~~l~~~G~iv~~G~~~  254 (338)
T cd08295         233 -------------------------MLDAVLLNMNLHGRIAACGMIS  254 (338)
T ss_pred             -------------------------HHHHHHHHhccCcEEEEecccc
Confidence                                     1123344567889999887543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG1197|consensus

Probab=96.46  E-value=0.057  Score=44.57  Aligned_cols=101  Identities=17%  Similarity=0.217  Sum_probs=68.8

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      -+.||+|..+++.+-.. +..+|.+..+.++.+.+.+.=..  +|.+.++-++++.+-. + -..+|++....|..    
T Consensus       154 aAAGGVGlll~Ql~ra~-~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiT-n-gKGVd~vyDsvG~d----  226 (336)
T KOG1197|consen  154 AAAGGVGLLLCQLLRAV-GAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKIT-N-GKGVDAVYDSVGKD----  226 (336)
T ss_pred             eccccHHHHHHHHHHhc-CcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhcc-C-CCCceeeeccccch----
Confidence            36799999999988888 66777777777777666554333  7888877766655422 1 13799999888863    


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccch
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTS  132 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~  132 (230)
                             .+..               -+..+++.|.+|.++-..+..+|...
T Consensus       227 -------t~~~---------------sl~~Lk~~G~mVSfG~asgl~~p~~l  256 (336)
T KOG1197|consen  227 -------TFAK---------------SLAALKPMGKMVSFGNASGLIDPIPL  256 (336)
T ss_pred             -------hhHH---------------HHHHhccCceEEEeccccCCCCCeeh
Confidence                   1111               12245788999999888787766544

>KOG4039|consensus

Probab=96.44  E-value=0.0086  Score=46.65  Aligned_cols=69  Identities=20%  Similarity=0.180  Sum_probs=45.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|++|-.|..+.+++++.+-+ .|+++.|....-.++...+.+  .|.+..++   .++..    -.+|+++.+-|..
T Consensus        23 vlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~---~a~~~----qg~dV~FcaLgTT   94 (238)
T KOG4039|consen   23 VLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVAQVEVDFSKLSQ---LATNE----QGPDVLFCALGTT   94 (238)
T ss_pred             EEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceeeeEEechHHHHH---HHhhh----cCCceEEEeeccc
Confidence            5699999999999999998654 677777764322223222222  44444444   33332    3799999998875

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.37  E-value=0.011  Score=52.50  Aligned_cols=67  Identities=10%  Similarity=0.108  Sum_probs=50.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|..+++.|+++|...|++++|+.++.+...+++....+...+++...       +...|+||++.+...
T Consensus       188 GaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~-------l~~aDiVI~aT~a~~  254 (414)
T PRK13940        188 GAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQL-------IKKADIIIAAVNVLE  254 (414)
T ss_pred             cCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHH-------hccCCEEEECcCCCC
Confidence            5699999999999999878999999999988888777643223333333333       347899999998753

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.35  E-value=0.017  Score=49.56  Aligned_cols=93  Identities=14%  Similarity=0.077  Sum_probs=58.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|++|.+++......|...|+.+.+++++.+...+++..   +|..+ ++..+.+.++..  +++|+++.+.|...
T Consensus       160 I~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~-~~~~~~i~~~~~--~gvd~vid~~g~~~  236 (345)
T cd08293         160 VSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT-DNVAERLRELCP--EGVDVYFDNVGGEI  236 (345)
T ss_pred             EECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-CCHHHHHHHHCC--CCceEEEECCCcHH
Confidence            6799999999987765556443788888887776665543321   33333 233333333322  47999999888520


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                                                .+..+..+++.|++|.++.
T Consensus       237 --------------------------~~~~~~~l~~~G~iv~~G~  255 (345)
T cd08293         237 --------------------------SDTVISQMNENSHIILCGQ  255 (345)
T ss_pred             --------------------------HHHHHHHhccCCEEEEEee
Confidence                                      1223345578899998874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.30  E-value=0.022  Score=49.39  Aligned_cols=95  Identities=15%  Similarity=0.163  Sum_probs=59.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|++|..++...... +..|+.+++++++.+...+++..   +|..+.+.+.+.+.++..  +++|+++.+.|.. 
T Consensus       164 V~GaaG~vG~~aiqlAk~~-G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~--~gvD~v~d~vG~~-  239 (348)
T PLN03154        164 VSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP--EGIDIYFDNVGGD-  239 (348)
T ss_pred             EecCccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC--CCcEEEEECCCHH-
Confidence            6799999999987766555 55777787777776654433321   344333334444443322  3699999998841 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               .....+..++++|+++.++...
T Consensus       240 -------------------------~~~~~~~~l~~~G~iv~~G~~~  261 (348)
T PLN03154        240 -------------------------MLDAALLNMKIHGRIAVCGMVS  261 (348)
T ss_pred             -------------------------HHHHHHHHhccCCEEEEECccc
Confidence                                     1122334567889999887544

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.20  E-value=0.027  Score=47.75  Aligned_cols=69  Identities=19%  Similarity=0.299  Sum_probs=43.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+++++|.++++.+... +..|+.+.+++++.+.. ..+..-++.+.++   +.+.+ .....+|++++++|.
T Consensus       168 I~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~-~~~~~~d~v~~~~g~  236 (332)
T cd08259         168 VTGAGGGVGIHAIQLAKAL-GARVIAVTRSPEKLKIL-KELGADYVIDGSK---FSEDV-KKLGGADVVIELVGS  236 (332)
T ss_pred             EECCCCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHH-HHcCCcEEEecHH---HHHHH-HhccCCCEEEECCCh
Confidence            6799999999999999888 45677777776655544 2221112222222   22222 223479999999985

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.20  E-value=0.02  Score=48.79  Aligned_cols=94  Identities=13%  Similarity=0.111  Sum_probs=59.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|++|..++...... +..|+.+.+++++.+... ++..   +|..+.+...+.+.++..  +++|+++.+.|.. 
T Consensus       144 I~ga~g~vG~~aiqlAk~~-G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~--~gvdvv~d~~G~~-  218 (325)
T TIGR02825       144 VNAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASP--DGYDCYFDNVGGE-  218 (325)
T ss_pred             EeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCC--CCeEEEEECCCHH-
Confidence            6799999999887755555 557888888777665553 3321   344443344444444422  3699999988852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               .++..+..++++|++|.++...
T Consensus       219 -------------------------~~~~~~~~l~~~G~iv~~G~~~  240 (325)
T TIGR02825       219 -------------------------FSNTVIGQMKKFGRIAICGAIS  240 (325)
T ss_pred             -------------------------HHHHHHHHhCcCcEEEEecchh
Confidence                                     0122334558899999887543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.15  E-value=0.0098  Score=50.65  Aligned_cols=68  Identities=15%  Similarity=0.116  Sum_probs=56.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |-|++|..|.-++++|+.+ +....+.+|+..++....+.+-.    +++-++..++++++       +.++|+||+|-.
T Consensus        11 iYGAtGy~G~lvae~l~~~-g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~-------~~~VVlncvGPy   82 (382)
T COG3268          11 IYGATGYAGGLVAEYLARE-GLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMAS-------RTQVVLNCVGPY   82 (382)
T ss_pred             EEccccchhHHHHHHHHHc-CCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHh-------cceEEEeccccc
Confidence            4599999999999999999 55668999999999988877654    45555777777765       789999999975

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.08  E-value=0.051  Score=44.36  Aligned_cols=94  Identities=23%  Similarity=0.321  Sum_probs=60.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+++ +|.+++..+... +..|+.+.+++++.+... .+..   +|..+.+....+.   ....+.+|++|+++|.. 
T Consensus       140 i~g~~~-~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~---~~~~~~~d~vi~~~~~~-  212 (271)
T cd05188         140 VLGAGG-VGLLAAQLAKAA-GARVIVTDRSDEKLELAK-ELGADHVIDYKEEDLEEELR---LTGGGGADVVIDAVGGP-  212 (271)
T ss_pred             EECCCH-HHHHHHHHHHHc-CCeEEEEcCCHHHHHHHH-HhCCceeccCCcCCHHHHHH---HhcCCCCCEEEECCCCH-
Confidence            578877 999998877766 578888888776655442 2211   3444444444333   22234799999998852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                              ...+..+..+++.|+++.++....
T Consensus       213 ------------------------~~~~~~~~~l~~~G~~v~~~~~~~  236 (271)
T cd05188         213 ------------------------ETLAQALRLLRPGGRIVVVGGTSG  236 (271)
T ss_pred             ------------------------HHHHHHHHhcccCCEEEEEccCCC
Confidence                                    123444456678899999887655

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.06  E-value=0.034  Score=47.93  Aligned_cols=91  Identities=21%  Similarity=0.196  Sum_probs=57.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++.+.+ +..   +|..+. ++.+    +....+.+|++|.++|.. 
T Consensus       175 V~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~-~~~~----~~~~~g~~D~vid~~G~~-  246 (343)
T PRK09880        175 VSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-MGADKLVNPQND-DLDH----YKAEKGYFDVSFEVSGHP-  246 (343)
T ss_pred             EECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-cCCcEEecCCcc-cHHH----HhccCCCCCEEEECCCCH-
Confidence            4664 8999998876666655578888888887765433 322   344432 2332    222235699999999852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                               +               ..+..+..++++|+++.++..
T Consensus       247 ---------~---------------~~~~~~~~l~~~G~iv~~G~~  268 (343)
T PRK09880        247 ---------S---------------SINTCLEVTRAKGVMVQVGMG  268 (343)
T ss_pred             ---------H---------------HHHHHHHHhhcCCEEEEEccC
Confidence                     1               112233445788999998753

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.06  E-value=0.032  Score=50.03  Aligned_cols=62  Identities=27%  Similarity=0.330  Sum_probs=42.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHHhhhc-------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEKLQK-------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~~~~~-------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|+++ +|.++|+.|+++ ++.|.+.+++. +.+++..+++..       .|..+            +..+.+|+||++
T Consensus        10 iiG~g~-~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~~d~vv~~   75 (450)
T PRK14106         10 VVGAGV-SGLALAKFLKKL-GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE------------EFLEGVDLVVVS   75 (450)
T ss_pred             EECCCH-HHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch------------hHhhcCCEEEEC
Confidence            578777 999999999999 45777777764 344433333332       33333            113579999999


Q ss_pred             cCCc
Q psy7994          73 AAIA   76 (230)
Q Consensus        73 ag~~   76 (230)
                      +|..
T Consensus        76 ~g~~   79 (450)
T PRK14106         76 PGVP   79 (450)
T ss_pred             CCCC
Confidence            9974

>PRK05086 malate dehydrogenase; Provisional

Probab=96.04  E-value=0.027  Score=48.22  Aligned_cols=97  Identities=18%  Similarity=0.143  Sum_probs=54.8

Q ss_pred             CCCCCCcHHHHHHHHHHH-hc-CCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHH----HHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQ-QF-DGIIYLTARDASRGQEALEKLQKLDILDKNSIKAL----HDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~-~g-~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~----~~~~~~~~~~id~lv~~ag   74 (230)
                      |.|++|++|.+++..|.. .+ +..+++.++++. ...     ...|+.+.+....+    .+.+.+.+...|+||.++|
T Consensus         5 IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g-----~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          5 VLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPG-----VAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             EECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccc-----eehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCC
Confidence            679999999999998865 22 357888888743 211     11243331100000    0111222346999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcc
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP  109 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  109 (230)
                      .....      .+.-.+.+..|....-.+++.+.+
T Consensus        79 ~~~~~------~~~R~dll~~N~~i~~~ii~~i~~  107 (312)
T PRK05086         79 VARKP------GMDRSDLFNVNAGIVKNLVEKVAK  107 (312)
T ss_pred             CCCCC------CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            85321      112345566676666666665543

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.02  E-value=0.026  Score=48.59  Aligned_cols=114  Identities=18%  Similarity=0.131  Sum_probs=68.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-C-----eEEEEecCc--chhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-G-----IIYLTARDA--SRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~-----~vi~~~r~~--~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|++|.+|.+++..|..++- .     .+++.+..+  ++++....++..+.......+ .+...-.+.+..-|+||.+
T Consensus         8 IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~-~i~~~~~~~~~daDvVVit   86 (323)
T TIGR01759         8 VTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGV-VATTDPEEAFKDVDAALLV   86 (323)
T ss_pred             EECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCc-EEecChHHHhCCCCEEEEe
Confidence            679999999999999998754 3     688998865  446666555554321100011 0111222334578999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      ||....      +.+.-.+.+..|+.=.-.+.+.+.++-.+++.+|.+|
T Consensus        87 AG~~~k------~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        87 GAFPRK------PGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             CCCCCC------CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            998531      1223345666666655556655554433466777766

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.91  E-value=0.027  Score=47.97  Aligned_cols=112  Identities=13%  Similarity=0.104  Sum_probs=62.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |.| +|++|.+++..|+..|.. .|+++++++++.+....++.++-........-.... .+.+..-|++|+++|.... 
T Consensus         5 IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~-~~~l~~aDIVIitag~~~~-   81 (306)
T cd05291           5 IIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGD-YSDCKDADIVVITAGAPQK-   81 (306)
T ss_pred             EEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCC-HHHhCCCCEEEEccCCCCC-
Confidence            345 599999999999998654 899999999988877776644210000000000000 0112479999999998532 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      +  ..+   -.+.++.|..=...+.+.+.++ .+.+.+|++|
T Consensus        82 ~--g~~---R~dll~~N~~i~~~~~~~i~~~-~~~~~vivvs  117 (306)
T cd05291          82 P--GET---RLDLLEKNAKIMKSIVPKIKAS-GFDGIFLVAS  117 (306)
T ss_pred             C--CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence            1  111   2334444544444444433321 1245666665

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.89  E-value=0.013  Score=49.30  Aligned_cols=67  Identities=21%  Similarity=0.349  Sum_probs=48.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc---cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~---D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ ||+|++++..|++.|...|++.+|+.++.+...+.+...   .+ +.        ...+.....|+|||+.....
T Consensus       128 VlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~--------~~~~~~~~~DivInaTp~g~  197 (278)
T PRK00258        128 ILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL--------ELQEELADFDLIINATSAGM  197 (278)
T ss_pred             EEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc--------cchhccccCCEEEECCcCCC
Confidence            4665 999999999999997689999999998888777766431   11 00        11122347899999987753

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.88  E-value=0.023  Score=47.97  Aligned_cols=69  Identities=14%  Similarity=-0.016  Sum_probs=48.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+||.|++++..|++.|...|.+++|+.++.+..++++.. .++...+..+    ++.......|+|||+....
T Consensus       132 GaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~----~~~~~~~~~DiVInaTp~g  201 (282)
T TIGR01809       132 GAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDS----GGLAIEKAAEVLVSTVPAD  201 (282)
T ss_pred             cCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchh----hhhhcccCCCEEEECCCCC
Confidence            5699999999999999888999999999998888776643 1111111111    1112224689999998875

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=95.85  E-value=0.044  Score=45.91  Aligned_cols=71  Identities=17%  Similarity=0.156  Sum_probs=47.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+++++|.+++..+... +..|+.+.+++++.+...+ +..   +|..+.+..+.+.+...  ...+|++++++|.
T Consensus       150 I~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~d~vi~~~~~  223 (325)
T cd08253         150 VHGGSGAVGHAAVQLARWA-GARVIATASSAEGAELVRQ-AGADAVFNYRAEDLADRILAATA--GQGVDVIIEVLAN  223 (325)
T ss_pred             EEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH-cCCCEEEeCCCcCHHHHHHHHcC--CCceEEEEECCch
Confidence            6799999999999988887 4678888887766655432 211   45555544444433221  1369999999874

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.76  E-value=0.04  Score=46.49  Aligned_cols=98  Identities=19%  Similarity=0.191  Sum_probs=69.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcC-CCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHG-GVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~-~id~lv~~ag~~   76 (230)
                      |++|+|.+|..+ -++++.-++.|+.+.-.+++.+-..+++.-   +|..++ ++   .+.+.+..+ .||+.+-|.|..
T Consensus       156 VSaAaGaVGsvv-gQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~---~~~L~~a~P~GIDvyfeNVGg~  230 (340)
T COG2130         156 VSAAAGAVGSVV-GQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DF---AQALKEACPKGIDVYFENVGGE  230 (340)
T ss_pred             EEecccccchHH-HHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cH---HHHHHHHCCCCeEEEEEcCCch
Confidence            578999999654 457777688999888888888877776543   566665 33   333333344 899999999973


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccc
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCH  129 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~  129 (230)
                                                +..+.+++|...+||+..+-++++..+
T Consensus       231 --------------------------v~DAv~~~ln~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         231 --------------------------VLDAVLPLLNLFARIPVCGAISQYNAP  257 (340)
T ss_pred             --------------------------HHHHHHHhhccccceeeeeehhhcCCC
Confidence                                      345667777888898887777665544

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.66  E-value=0.031  Score=51.36  Aligned_cols=68  Identities=19%  Similarity=0.305  Sum_probs=45.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ ||+|++++..|+++|. .|++++|+.++.+...+.+.. +....++.....      ....|++||+.....
T Consensus       384 IlGa-GGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~-~~~~~~~~~~~~------~~~~diiINtT~vGm  451 (529)
T PLN02520        384 VIGA-GGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGG-QALTLADLENFH------PEEGMILANTTSVGM  451 (529)
T ss_pred             EECC-cHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCC-ceeeHhHhhhhc------cccCeEEEecccCCC
Confidence            5777 6999999999999976 899999998888877666531 222222221111      114688998887653

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.52  E-value=0.04  Score=46.07  Aligned_cols=68  Identities=21%  Similarity=0.341  Sum_probs=46.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc-cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~-D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ ||+|++++..|++.| ..|.+.+|+.++.+...+.+... .+.. .....      ......|+|||+.+...
T Consensus       122 iiGa-Gg~g~aia~~L~~~g-~~v~v~~R~~~~~~~la~~~~~~~~~~~-~~~~~------~~~~~~DivInatp~gm  190 (270)
T TIGR00507       122 IIGA-GGAARAVALPLLKAD-CNVIIANRTVSKAEELAERFQRYGEIQA-FSMDE------LPLHRVDLIINATSAGM  190 (270)
T ss_pred             EEcC-cHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHhhcCceEE-echhh------hcccCccEEEECCCCCC
Confidence            4676 699999999999985 58889999988887777665431 1110 00111      11246899999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.52  E-value=0.077  Score=45.74  Aligned_cols=89  Identities=18%  Similarity=0.205  Sum_probs=60.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|.+ |+|....+..... +..|+..+|++++++.+.+.-..  .+.+|++.++.+.+       .+|++|.+++ .. 
T Consensus       172 I~G~G-GlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~-------~~d~ii~tv~-~~-  240 (339)
T COG1064         172 VVGAG-GLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKE-------IADAIIDTVG-PA-  240 (339)
T ss_pred             EECCc-HHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHh-------hCcEEEECCC-hh-
Confidence            46776 9998766655557 58999999999988766554332  56566666655544       2999999998 41 


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                            +                  +...++.++++|+++.++-..
T Consensus       241 ------~------------------~~~~l~~l~~~G~~v~vG~~~  262 (339)
T COG1064         241 ------T------------------LEPSLKALRRGGTLVLVGLPG  262 (339)
T ss_pred             ------h------------------HHHHHHHHhcCCEEEEECCCC
Confidence                  1                  223344567889988887663

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.47  E-value=0.026  Score=47.65  Aligned_cols=65  Identities=15%  Similarity=0.179  Sum_probs=46.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+||.|++++..|++.|...|++++|+.++.+...+.+..    ..+...+++..       .....|+|||+...
T Consensus       134 GaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~-------~~~~aDiVInaTp~  202 (284)
T PRK12549        134 GAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAA-------ALAAADGLVHATPT  202 (284)
T ss_pred             CCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHh-------hhCCCCEEEECCcC
Confidence            5689999999999999878999999999988888776642    11111122111       22468999999543

>KOG0023|consensus

Probab=95.45  E-value=0.09  Score=44.76  Aligned_cols=93  Identities=18%  Similarity=0.246  Sum_probs=61.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCC-CHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDIL-DKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s-~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|++| ||. ++-++++.-+..|+..++...+.++..+.+-.   +|.+ |++.++++.+.       .|.+++++...
T Consensus       187 I~GlGG-LGh-~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~-------~dg~~~~v~~~  257 (360)
T KOG0023|consen  187 IVGLGG-LGH-MAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKT-------TDGGIDTVSNL  257 (360)
T ss_pred             EecCcc-cch-HHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHh-------hcCcceeeeec
Confidence            456665 885 56667777678999999998888888777665   7888 88888777763       34444444321


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      .     +.+                  +..++.++|.+|++|+++-...
T Consensus       258 a-----~~~------------------~~~~~~~lk~~Gt~V~vg~p~~  283 (360)
T KOG0023|consen  258 A-----EHA------------------LEPLLGLLKVNGTLVLVGLPEK  283 (360)
T ss_pred             c-----ccc------------------hHHHHHHhhcCCEEEEEeCcCC
Confidence            0     111                  1223446688899998886654

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.34  E-value=0.045  Score=44.79  Aligned_cols=34  Identities=18%  Similarity=0.082  Sum_probs=28.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA   37 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~   37 (230)
                      |.||+|..+++.|+..|...+.+++.+.-...+.
T Consensus        18 G~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNl   51 (231)
T cd00755          18 GLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNL   51 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEECchhh
Confidence            6789999999999999988999998876544443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.31  E-value=0.07  Score=45.04  Aligned_cols=66  Identities=18%  Similarity=0.271  Sum_probs=47.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-c-----cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-L-----DILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-~-----D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+||-|++++..|++.|...|++.+|+.++.+...+.+.. .     ...+.......       ....|+|||+....
T Consensus       134 GaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~-------~~~~divINaTp~G  205 (283)
T PRK14027        134 GAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDV-------IAAADGVVNATPMG  205 (283)
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHH-------HhhcCEEEEcCCCC
Confidence            5699999999999999888999999999988888776532 1     11111111111       13589999998765

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.17  E-value=0.27  Score=43.17  Aligned_cols=95  Identities=13%  Similarity=0.055  Sum_probs=60.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      |.|.+|...++.+...|. .|++.+|++++++.....+..   .+..+++.+.+.+       ...|+||++++......
T Consensus       174 GaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l-------~~aDvVI~a~~~~g~~~  245 (370)
T TIGR00518       174 GGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV-------KRADLLIGAVLIPGAKA  245 (370)
T ss_pred             cCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH-------ccCCEEEEccccCCCCC
Confidence            447899999999999955 788899988877766554432   2444555544443       36899999986531100


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                         +..+.+..+..|++++.||.++...+
T Consensus       246 -------------------p~lit~~~l~~mk~g~vIvDva~d~G  271 (370)
T TIGR00518       246 -------------------PKLVSNSLVAQMKPGAVIVDVAIDQG  271 (370)
T ss_pred             -------------------CcCcCHHHHhcCCCCCEEEEEecCCC
Confidence                               01112233344577788888886655

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.13  E-value=0.13  Score=43.57  Aligned_cols=95  Identities=18%  Similarity=0.192  Sum_probs=58.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+++++|.+++..+.+. +..|+.+.+++++.+...+.+..   .|..+.+..+.+. +...  +.+|+++++.|.. 
T Consensus       151 I~g~~g~ig~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~-~~~~--~~~d~vi~~~g~~-  225 (329)
T cd05288         151 VSAAAGAVGSVVGQIAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALK-EAAP--DGIDVYFDNVGGE-  225 (329)
T ss_pred             EecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHH-Hhcc--CCceEEEEcchHH-
Confidence            5789999999988877777 45777787777666554332321   3344333323222 2221  4799999988741 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               .++..++.+++.|+++.++...+
T Consensus       226 -------------------------~~~~~~~~l~~~G~~v~~g~~~~  248 (329)
T cd05288         226 -------------------------ILDAALTLLNKGGRIALCGAISQ  248 (329)
T ss_pred             -------------------------HHHHHHHhcCCCceEEEEeeccC
Confidence                                     23333445577899998876543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.11  E-value=0.064  Score=45.23  Aligned_cols=68  Identities=16%  Similarity=0.237  Sum_probs=49.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc----cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL----DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~----D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |+||-+++++..|++.|...|.+..|+.++.++..+.+...    ...+..+.+..        ...|+|||+.......
T Consensus       133 GAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~--------~~~dliINaTp~Gm~~  204 (283)
T COG0169         133 GAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGL--------EEADLLINATPVGMAG  204 (283)
T ss_pred             CCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccc--------cccCEEEECCCCCCCC
Confidence            67999999999999998889999999999999888877631    11111111110        0479999999876543

>PRK05442 malate dehydrogenase; Provisional

Probab=95.10  E-value=0.042  Score=47.30  Aligned_cols=114  Identities=17%  Similarity=0.098  Sum_probs=63.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC------eEEEEecCcc--hhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG------IIYLTARDAS--RGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~------~vi~~~r~~~--~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|++|.+|..++..|+..+-.      .+++.+.++.  +++....++..+-..-...+ .+.....+.+..-|++|.+
T Consensus         9 IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~-~i~~~~y~~~~daDiVVit   87 (326)
T PRK05442          9 VTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGV-VITDDPNVAFKDADVALLV   87 (326)
T ss_pred             EECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCc-EEecChHHHhCCCCEEEEe
Confidence            6799999999999999886543      5888888543  35544444433110000000 1111222334589999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      ||....      +.+.-.+.+..|..=.-.+.+.+.++-.+.+.+|.+|
T Consensus        88 aG~~~k------~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         88 GARPRG------PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             CCCCCC------CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            997531      1223344556665544444444443333456666666

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.07  E-value=0.04  Score=47.09  Aligned_cols=109  Identities=14%  Similarity=0.127  Sum_probs=63.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCc--chhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDA--SRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~--~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      |+|++|.+|..++..|+..|.. .|+++++++  ++++.....+.+        ..++-..+    .    +.+..-|++
T Consensus         5 IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d----~----~~l~~aDiV   76 (309)
T cd05294           5 IIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD----L----SDVAGSDIV   76 (309)
T ss_pred             EECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC----H----HHhCCCCEE
Confidence            6799999999999999998644 588888855  444444333322        01110001    1    113479999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      |.++|....   ...+   -.+.++.|+.=...+.+.+.+.. +++.+|.+++..
T Consensus        77 iitag~p~~---~~~~---r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~npv  124 (309)
T cd05294          77 IITAGVPRK---EGMS---RLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPV  124 (309)
T ss_pred             EEecCCCCC---CCCC---HHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCch
Confidence            999998531   1122   23344555555555555444332 356777777543

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.01  E-value=0.1  Score=38.31  Aligned_cols=73  Identities=15%  Similarity=0.262  Sum_probs=50.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCe-EEEEecCc----------------------chhHHHHHhhhc--ccCCCHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDA----------------------SRGQEALEKLQK--LDILDKNSIKAL   55 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~-vi~~~r~~----------------------~~~~~~~~~~~~--~D~s~~~~v~~~   55 (230)
                      |.|++|-+|+.+++.+.+..+.. +..+++.+                      +.+++..+. .+  +|+|.++.+...
T Consensus         5 i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-~DVvIDfT~p~~~~~~   83 (124)
T PF01113_consen    5 IVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-ADVVIDFTNPDAVYDN   83 (124)
T ss_dssp             EETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--SEEEEES-HHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-CCEEEEcCChHHhHHH
Confidence            57899999999999999954554 45556665                      223333333 12  799999999999


Q ss_pred             HHHHHhhcCCCcEEEEccCCc
Q psy7994          56 HDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus        56 ~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ++.+.+.  ++.+|+-+.|+.
T Consensus        84 ~~~~~~~--g~~~ViGTTG~~  102 (124)
T PF01113_consen   84 LEYALKH--GVPLVIGTTGFS  102 (124)
T ss_dssp             HHHHHHH--T-EEEEE-SSSH
T ss_pred             HHHHHhC--CCCEEEECCCCC
Confidence            9988877  788999888873

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=94.99  E-value=0.16  Score=43.03  Aligned_cols=87  Identities=15%  Similarity=0.218  Sum_probs=54.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |.|++|+++++.|...| ..|++.+|++++.....+ . .......+++.+.       ....|++|++....       
T Consensus       158 G~G~iG~avA~~L~~~G-~~V~v~~R~~~~~~~~~~-~-g~~~~~~~~l~~~-------l~~aDiVint~P~~-------  220 (287)
T TIGR02853       158 GFGRTGMTIARTFSALG-ARVFVGARSSADLARITE-M-GLIPFPLNKLEEK-------VAEIDIVINTIPAL-------  220 (287)
T ss_pred             cChHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-C-CCeeecHHHHHHH-------hccCCEEEECCChH-------
Confidence            34789999999999995 588899998776544322 1 1111122233322       24789999987431       


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                              +          +.+..+..|++...||.++|..+
T Consensus       221 --------i----------i~~~~l~~~k~~aliIDlas~Pg  244 (287)
T TIGR02853       221 --------V----------LTADVLSKLPKHAVIIDLASKPG  244 (287)
T ss_pred             --------H----------hCHHHHhcCCCCeEEEEeCcCCC
Confidence                    0          01223445677788999998766

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=94.98  E-value=0.17  Score=42.14  Aligned_cols=116  Identities=17%  Similarity=0.112  Sum_probs=64.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhc--C-CeEEEEecCcchhHHHHHhhhcccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQF--D-GIIYLTARDASRGQEALEKLQKLDILD-KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g--~-~~vi~~~r~~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|++|.+|..++..|+..+  . ..|++.++++++++....+++.+-... .-.+. .-+...+.+..-|+||..+|..
T Consensus         3 IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~-~~~d~~~~~~~aDiVv~t~~~~   81 (263)
T cd00650           3 VIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS-ITDDPYEAFKDADVVIITAGVG   81 (263)
T ss_pred             EECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE-ECCchHHHhCCCCEEEECCCCC
Confidence            57888899999999999884  2 589999999888877666654310000 00000 0011112234799999999975


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      ...   ..+   -...+..|+.--..+++.+.+.- +++.+|++|-..
T Consensus        82 ~~~---g~~---r~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tNP~  122 (263)
T cd00650          82 RKP---GMG---RLDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSNPV  122 (263)
T ss_pred             CCc---CCC---HHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcH
Confidence            321   111   12233334443444444433222 456777776433

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=94.98  E-value=0.024  Score=44.80  Aligned_cols=69  Identities=6%  Similarity=0.064  Sum_probs=37.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      .||-+|.++|+.+..+|+.+.++.+...-..   -..+...++..-+++...+.   +.+..-|++|++|.++..
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~---p~~~~~i~v~sa~em~~~~~---~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSSLPP---PPGVKVIRVESAEEMLEAVK---ELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS-------TTEEEEE-SSHHHHHHHHH---HHGGGGSEEEE-SB--SE
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCccccc---cccceEEEecchhhhhhhhc---cccCcceeEEEecchhhe
Confidence            4688999999999999665555555432111   12233345555555554444   445556999999999754

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=94.98  E-value=0.18  Score=43.11  Aligned_cols=94  Identities=18%  Similarity=0.215  Sum_probs=56.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|..++..+...|...|+.+++++++.+.. .++..   +|..+.+ .+++.+ +.. ..++|++|.+.|...
T Consensus       169 V~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~~~i~~~~~~-~~~~~~-~~~-~~~~d~vid~~g~~~  243 (339)
T cd08239         169 VVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGADFVINSGQDD-VQEIRE-LTS-GAGADVAIECSGNTA  243 (339)
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEcCCcch-HHHHHH-HhC-CCCCCEEEECCCCHH
Confidence            4664 89999988877777555488888887776654 33321   3544443 333322 211 126999999988520


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               ..+..+..++.+|+++.++...
T Consensus       244 -------------------------~~~~~~~~l~~~G~~v~~g~~~  265 (339)
T cd08239         244 -------------------------ARRLALEAVRPWGRLVLVGEGG  265 (339)
T ss_pred             -------------------------HHHHHHHHhhcCCEEEEEcCCC
Confidence                                     1112233457788888887543

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=94.92  E-value=0.17  Score=45.32  Aligned_cols=114  Identities=11%  Similarity=-0.061  Sum_probs=67.9

Q ss_pred             CCCCCCcHHHHHHHHHHHh-------cC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-------FD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-------g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|++|-+|.+++..|+..       +- ..+++.+++.++++....++..+=..-...+. +-..-.+.+..-|++|..
T Consensus       105 IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~~~ye~~kdaDiVVit  183 (444)
T PLN00112        105 VSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGIDPYEVFQDAEWALLI  183 (444)
T ss_pred             EECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-EecCCHHHhCcCCEEEEC
Confidence            6899899999999999986       43 36899999999988887776642100000110 000112334589999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      +|.... +  .   +.-.+.++.|..=.-.+.+.+.+...+++.||.+|
T Consensus       184 AG~prk-p--G---~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        184 GAKPRG-P--G---MERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             CCCCCC-C--C---CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            998531 1  1   22334555555544444444433223446666665

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=94.81  E-value=0.44  Score=51.49  Aligned_cols=171  Identities=12%  Similarity=0.046  Sum_probs=96.6

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEec-----CcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTAR-----DASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r-----~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ++.+++++.+++..|.++|...+++..-     ....+......+ .+.--|...+..+++.+....++++.+||.....
T Consensus      1761 ~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~ 1839 (2582)
T TIGR02813      1761 IDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVSHSASPLASAIASV-TLGTIDDTSIEAVIKDIEEKTAQIDGFIHLQPQH 1839 (2582)
T ss_pred             EcCCcchHHHHHHHHHhCCCeEEEeeccccccccccccccccccc-cccccchHHHHHHHHhhhccccccceEEEecccc
Confidence            4557889999999999996655444211     111111111111 1333456677777777777778999999988764


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      .. .....+.......-...+...|.+.|.+.+.+..  ++.++.++...|-++-...                      
T Consensus      1840 ~~-~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~---------------------- 1896 (2582)
T TIGR02813      1840 KS-VADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNG---------------------- 1896 (2582)
T ss_pred             cc-ccccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCc----------------------
Confidence            21 0010110011112224445567888887766543  4678888887763321100                      


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPG  210 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG  210 (230)
                               +...+..+ .--....+++.+|+|+++.|+...    -+|...+.|.
T Consensus      1897 ---------~~~~~~~~-~~~~~~~a~l~Gl~Ktl~~E~P~~----~~r~vDl~~~ 1938 (2582)
T TIGR02813      1897 ---------DADSGTQQ-VKAELNQAALAGLTKTLNHEWNAV----FCRALDLAPK 1938 (2582)
T ss_pred             ---------cccccccc-cccchhhhhHHHHHHhHHHHCCCC----eEEEEeCCCC
Confidence                     00000000 001345789999999999999876    4667777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.80  E-value=0.044  Score=40.52  Aligned_cols=73  Identities=11%  Similarity=0.205  Sum_probs=45.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------------ccC---C-CHHHHHHHHHHHHhh--cCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDI---L-DKNSIKALHDHLEAE--HGG   65 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------------~D~---s-~~~~v~~~~~~~~~~--~~~   65 (230)
                      |+|-+|.++++.|.+.|...+-+.+|+....+.....+..            +|+   + ..+.+..+.+++...  +.+
T Consensus        17 GaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va~~La~~~~~~~   96 (127)
T PF10727_consen   17 GAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVAEQLAQYGAWRP   96 (127)
T ss_dssp             CTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHHHHHHCC--S-T
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHHHHHHHhccCCC
Confidence            4588999999999999665556667887666665544322            332   1 234788888888765  334


Q ss_pred             CcEEEEccCCc
Q psy7994          66 VDVLVNNAAIA   76 (230)
Q Consensus        66 id~lv~~ag~~   76 (230)
                      =.+||||.|..
T Consensus        97 g~iVvHtSGa~  107 (127)
T PF10727_consen   97 GQIVVHTSGAL  107 (127)
T ss_dssp             T-EEEES-SS-
T ss_pred             CcEEEECCCCC
Confidence            46999999974

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.72  E-value=0.17  Score=44.60  Aligned_cols=114  Identities=14%  Similarity=-0.028  Sum_probs=65.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCe------EEEE--ecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGI------IYLT--ARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~------vi~~--~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|++|-+|.+++..|+.++-..      +++.  +++.++++....++..+-..-...+. +...-.+.+..-|++|..
T Consensus        49 IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~~~y~~~kdaDIVVit  127 (387)
T TIGR01757        49 VSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGIDPYEVFEDADWALLI  127 (387)
T ss_pred             EECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-EecCCHHHhCCCCEEEEC
Confidence            68998999999999999886543      3344  77888887776666542100000110 000112334589999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      ||.... +     .+.-.+.+..|+.=.-.+.+.+.++-.+.+.||.+|
T Consensus       128 AG~prk-p-----g~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       128 GAKPRG-P-----GMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             CCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            998531 1     122334555555544444444443333456666666

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.69  E-value=0.15  Score=45.69  Aligned_cols=38  Identities=24%  Similarity=0.407  Sum_probs=30.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE   39 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~   39 (230)
                      |.||.|.+|.++++.|.+. +..|.+.+|+++.......
T Consensus         5 IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          5 IIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHH
Confidence            4688999999999999998 4578888888776544433

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=94.66  E-value=0.12  Score=44.26  Aligned_cols=65  Identities=17%  Similarity=0.184  Sum_probs=49.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|.+|..+++.|...|...|++++|++++.....+++.. ++.+.+++...+       ...|++|.+.+..
T Consensus       185 GaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-~~~~~~~~~~~l-------~~aDvVi~at~~~  249 (311)
T cd05213         185 GAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-NAVPLDELLELL-------NEADVVISATGAP  249 (311)
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-eEEeHHHHHHHH-------hcCCEEEECCCCC
Confidence            3599999999999998778999999999888877777643 444444444333       2579999999864

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=94.66  E-value=0.19  Score=42.59  Aligned_cols=92  Identities=16%  Similarity=0.120  Sum_probs=56.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|++|..++...... +..|+.+.+++++.+...+ +..   +|..+++-.+. +.++..  +++|+++.+.|.. 
T Consensus       149 I~ga~g~vG~~aiqlA~~~-G~~vi~~~~s~~~~~~l~~-~Ga~~vi~~~~~~~~~~-v~~~~~--~gvd~vld~~g~~-  222 (329)
T cd08294         149 VNGAAGAVGSLVGQIAKIK-GCKVIGCAGSDDKVAWLKE-LGFDAVFNYKTVSLEEA-LKEAAP--DGIDCYFDNVGGE-  222 (329)
T ss_pred             EecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH-cCCCEEEeCCCccHHHH-HHHHCC--CCcEEEEECCCHH-
Confidence            6799999998877766666 5578888887776655533 321   34444333233 333222  3699999888741 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                               ..+..+..++..|+++.++..
T Consensus       223 -------------------------~~~~~~~~l~~~G~iv~~g~~  243 (329)
T cd08294         223 -------------------------FSSTVLSHMNDFGRVAVCGSI  243 (329)
T ss_pred             -------------------------HHHHHHHhhccCCEEEEEcch
Confidence                                     112233445778999888653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG1198|consensus

Probab=94.57  E-value=0.12  Score=44.88  Aligned_cols=71  Identities=23%  Similarity=0.278  Sum_probs=46.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.||+||+|.+..+.....+ ...+++.++.+..+-. +++..   .|..+++-++.+.+..   .+++|+|+.|.|..
T Consensus       163 v~ggsggVG~~aiQlAk~~~-~~~v~t~~s~e~~~l~-k~lGAd~vvdy~~~~~~e~~kk~~---~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  163 VLGGSGGVGTAAIQLAKHAG-AIKVVTACSKEKLELV-KKLGADEVVDYKDENVVELIKKYT---GKGVDVVLDCVGGS  236 (347)
T ss_pred             EEeCCcHHHHHHHHHHHhcC-CcEEEEEcccchHHHH-HHcCCcEeecCCCHHHHHHHHhhc---CCCccEEEECCCCC
Confidence            57999999999887666654 4555566665554433 22322   6888855544444322   46899999999984

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=94.57  E-value=0.14  Score=43.87  Aligned_cols=113  Identities=18%  Similarity=0.142  Sum_probs=63.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHH-H-HHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKAL-H-DHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~-~-~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|.+|.+++..|+.++- ..+++++.+  +++....++..+.. . -.+... - +.+.+.+..-|++|.+||...
T Consensus         5 IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~-~-~~i~~~~~~~~~y~~~~daDivvitaG~~~   80 (310)
T cd01337           5 VLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT-P-AKVTGYLGPEELKKALKGADVVVIPAGVPR   80 (310)
T ss_pred             EECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC-c-ceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence            679889999999999998754 478888887  44433333433220 0 011100 0 011233458999999999853


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      . +     .+.-.+.++.|..=...+.+.+.++ .+++.+|++|-..
T Consensus        81 k-~-----g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~vivvtNPv  120 (310)
T cd01337          81 K-P-----GMTRDDLFNINAGIVRDLATAVAKA-CPKALILIISNPV  120 (310)
T ss_pred             C-C-----CCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCch
Confidence            2 1     1223445555655555555544433 2346666666443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=94.55  E-value=0.41  Score=43.76  Aligned_cols=99  Identities=14%  Similarity=0.127  Sum_probs=63.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCCCH-------------HHHHHHHHHHHhhcCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDILDK-------------NSIKALHDHLEAEHGGV   66 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s~~-------------~~v~~~~~~~~~~~~~i   66 (230)
                      |.|.+|...+..+...|. .|+.+++++++++...+ +..    .|..+.             +..++..+.+.+..+..
T Consensus       172 GaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~ga  249 (509)
T PRK09424        172 GAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEV  249 (509)
T ss_pred             CCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCC
Confidence            568899998888888855 79999999888775544 221    232221             11222222223333579


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      |++|.++|.....                   ++..+++..+..|+++++|+.++..
T Consensus       250 DVVIetag~pg~~-------------------aP~lit~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        250 DIIITTALIPGKP-------------------APKLITAEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             CEEEECCCCCccc-------------------CcchHHHHHHHhcCCCCEEEEEccC
Confidence            9999999974210                   1333456677788999999999864

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.37  E-value=0.12  Score=43.23  Aligned_cols=32  Identities=22%  Similarity=0.116  Sum_probs=26.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ   35 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~   35 (230)
                      |.||+|..+++.|+..|...+.+++.+.-...
T Consensus        37 G~GGVGs~vae~Lar~GVg~itLiD~D~V~~s   68 (268)
T PRK15116         37 GIGGVGSWAAEALARTGIGAITLIDMDDVCVT   68 (268)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCEeccc
Confidence            67899999999999998788888887654333

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.36  E-value=0.36  Score=40.30  Aligned_cols=95  Identities=16%  Similarity=0.136  Sum_probs=54.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccC-CCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDI-LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~-s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |.|+ |++|...+..+...|...|+.+++++++++.. +++.. |. -+.+...+.+.++.. -..+|++|.+.|..   
T Consensus       126 V~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga-~~~i~~~~~~~~~~~~~~-~~g~d~vid~~G~~---  198 (280)
T TIGR03366       126 VVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA-LSFGA-TALAEPEVLAERQGGLQN-GRGVDVALEFSGAT---  198 (280)
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCC-cEecCchhhHHHHHHHhC-CCCCCEEEECCCCh---
Confidence            4554 89999988876666555587777777666543 32321 11 122221222222211 12599999998852   


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                             .               .++..+..+++.|+++.++...
T Consensus       199 -------~---------------~~~~~~~~l~~~G~iv~~G~~~  221 (280)
T TIGR03366       199 -------A---------------AVRACLESLDVGGTAVLAGSVF  221 (280)
T ss_pred             -------H---------------HHHHHHHHhcCCCEEEEeccCC
Confidence                   0               1222344558889999998653

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.31  E-value=0.09  Score=44.88  Aligned_cols=75  Identities=19%  Similarity=0.179  Sum_probs=48.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhcccCCCHHHHHHHH-HHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALH-DHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~-~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|.+++..|+.++.. .+++.++.++.++....++..+-......++-.. .. .+.+..-|++|..||...
T Consensus         5 viGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG~pr   81 (313)
T COG0039           5 VIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAGVPR   81 (313)
T ss_pred             EECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCCCCC
Confidence            5788 99999999999988776 8999999977766665555441110000000000 00 122347999999999864

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.27  E-value=0.33  Score=41.58  Aligned_cols=74  Identities=15%  Similarity=0.140  Sum_probs=48.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhccc-CCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLD-ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~~D-~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |.+|.+++..|+..+-. .+++++.+.++++....++..+- +.....+.. .... +.+..-|++|.++|...
T Consensus         8 IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-~~dy-~~~~~adivvitaG~~~   83 (312)
T cd05293           8 VVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-DKDY-SVTANSKVVIVTAGARQ   83 (312)
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-CCCH-HHhCCCCEEEECCCCCC
Confidence            5675 99999999999988654 79999998887777766666532 111111110 0111 12357999999999853

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.26  E-value=0.31  Score=42.17  Aligned_cols=95  Identities=19%  Similarity=0.197  Sum_probs=56.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.| +|++|...+......|...|+.+++++++.+.+. ++..   +|..+++..+.+. ++... ..+|++|.+.|.. 
T Consensus       182 V~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~i~-~~~~~-~g~d~vid~~g~~-  256 (358)
T TIGR03451       182 VIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EFGATHTVNSSGTDPVEAIR-ALTGG-FGADVVIDAVGRP-  256 (358)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEEcCCCcCHHHHHH-HHhCC-CCCCEEEECCCCH-
Confidence            456 5899999877666665556888888887766553 3321   3444433333322 22111 2599999998852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                               +.+               +..+..++++|+++.++...
T Consensus       257 ---------~~~---------------~~~~~~~~~~G~iv~~G~~~  279 (358)
T TIGR03451       257 ---------ETY---------------KQAFYARDLAGTVVLVGVPT  279 (358)
T ss_pred             ---------HHH---------------HHHHHHhccCCEEEEECCCC
Confidence                     111               11223457889999887643

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.21  E-value=0.33  Score=42.28  Aligned_cols=94  Identities=19%  Similarity=0.264  Sum_probs=55.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+| +|++|...+..+...|...|+.+++++++++.+ .++..   +|..+++-.+. +.++..  +.+|++|.+.|.. 
T Consensus       197 V~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~~i~~~~~~~~~~-i~~~~~--~g~d~vid~~G~~-  270 (371)
T cd08281         197 VVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGATATVNAGDPNAVEQ-VRELTG--GGVDYAFEMAGSV-  270 (371)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCCceEeCCCchhHHHH-HHHHhC--CCCCEEEECCCCh-
Confidence            456 589999887766666554788888888776644 33321   34444332232 222222  2699999998852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                               +               ..+..+..++++|+++.++...
T Consensus       271 ---------~---------------~~~~~~~~l~~~G~iv~~G~~~  293 (371)
T cd08281         271 ---------P---------------ALETAYEITRRGGTTVTAGLPD  293 (371)
T ss_pred             ---------H---------------HHHHHHHHHhcCCEEEEEccCC
Confidence                     1               1122233457889998887543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=94.15  E-value=0.39  Score=43.85  Aligned_cols=102  Identities=15%  Similarity=0.140  Sum_probs=64.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCC-------------CHHHHHHHHHHHHhhcCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDIL-------------DKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s-------------~~~~v~~~~~~~~~~~~~i   66 (230)
                      |.|.+|...+..+...|. .|++.+++.++++...+ +..    .|..             ..+..+...+.+.+.....
T Consensus       171 GaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~  248 (511)
T TIGR00561       171 GAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEV  248 (511)
T ss_pred             CCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCC
Confidence            358999999998888854 57778888776654433 221    2321             1233444444455555689


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                      |++|+++-+...                   ..+.++++..+..|++++.||.++...|-
T Consensus       249 DIVI~TalipG~-------------------~aP~Lit~emv~~MKpGsvIVDlA~d~GG  289 (511)
T TIGR00561       249 DIIITTALIPGK-------------------PAPKLITEEMVDSMKAGSVIVDLAAEQGG  289 (511)
T ss_pred             CEEEECcccCCC-------------------CCCeeehHHHHhhCCCCCEEEEeeeCCCC
Confidence            999999943210                   12334555667778999999999887663

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=94.14  E-value=0.21  Score=42.50  Aligned_cols=110  Identities=15%  Similarity=0.114  Sum_probs=64.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhcccCCC-H-HHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILD-K-NSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~~D~s~-~-~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.| +|.+|.+++..|+.++-. .+++++++.+.++....++..+...- . -.+..  . -.+.+..-|++|..+|...
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~-~~~~~~daDivVitag~~r   76 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS--G-DYSDCKDADLVVITAGAPQ   76 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec--C-CHHHHCCCCEEEECCCCCC
Confidence            445 489999999999988654 79999999888887777766522100 0 01110  0 0123457899999999853


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      . +  .++   -.+.+..|..=...+.+.+.++ .+++.+|++|
T Consensus        77 k-~--g~~---R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvs  113 (299)
T TIGR01771        77 K-P--GET---RLELVGRNVRIMKSIVPEVVKS-GFDGIFLVAT  113 (299)
T ss_pred             C-C--CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeC
Confidence            2 1  122   2344555555444444444332 2345666665

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=94.08  E-value=0.38  Score=41.91  Aligned_cols=71  Identities=23%  Similarity=0.256  Sum_probs=45.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+| +|+||...+......|...|+.+++++++++.+. ++..   +|..+ .+.+.+.+.++..  +.+|++|.++|.
T Consensus       191 V~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~--~g~d~vid~~G~  265 (368)
T TIGR02818       191 VFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KLGATDCVNPNDYDKPIQEVIVEITD--GGVDYSFECIGN  265 (368)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCeEEcccccchhHHHHHHHHhC--CCCCEEEECCCC
Confidence            466 4899999877666665547888888887766553 3321   34443 2233344444433  379999999985

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.08  E-value=0.3  Score=43.32  Aligned_cols=65  Identities=17%  Similarity=0.200  Sum_probs=52.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|-+|.-++++|+++|...|++.+|+.++.+..+.++. .++...+++...+.       ..|+||.+.|..
T Consensus       185 GAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-~~~~~l~el~~~l~-------~~DvVissTsa~  249 (414)
T COG0373         185 GAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-AEAVALEELLEALA-------EADVVISSTSAP  249 (414)
T ss_pred             cccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-CeeecHHHHHHhhh-------hCCEEEEecCCC
Confidence            457799999999999988999999999999999998887 45555555555544       689999888764

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=94.02  E-value=0.16  Score=43.49  Aligned_cols=72  Identities=13%  Similarity=0.142  Sum_probs=49.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhccc-CCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLD-ILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~~D-~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ |.+|.+++..|+.++.. .+++.+++.++++....++..+- +...-.+.  ... .+.+..-|++|..+|..
T Consensus        11 iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~-~~~~~~adivIitag~~   84 (315)
T PRK00066         11 LVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGD-YSDCKDADLVVITAGAP   84 (315)
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCC-HHHhCCCCEEEEecCCC
Confidence            5686 99999999999998654 79999999988887777766521 10110111  011 12245799999999985

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=94.01  E-value=0.19  Score=41.92  Aligned_cols=71  Identities=14%  Similarity=0.232  Sum_probs=45.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+++++|.+++..+... +..|+.+.++.++.+.. ..+..   ++..+.+....+.+.. . .+++|++++++|.
T Consensus       145 v~g~~~~ig~~~~~~~~~~-g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~d~vi~~~g~  218 (323)
T cd05276         145 IHGGASGVGTAAIQLAKAL-GARVIATAGSEEKLEAC-RALGADVAINYRTEDFAEEVKEAT-G-GRGVDVILDMVGG  218 (323)
T ss_pred             EEcCcChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHH-HHcCCCEEEeCCchhHHHHHHHHh-C-CCCeEEEEECCch
Confidence            6799999999999988888 45678888877666554 22221   3433333333333322 1 1369999999984

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=93.94  E-value=0.37  Score=41.87  Aligned_cols=95  Identities=19%  Similarity=0.136  Sum_probs=62.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhc-C-CCcEEEEccCCcccc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEH-G-GVDVLVNNAAIAFKV   79 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~-~-~id~lv~~ag~~~~~   79 (230)
                      |+|-||...+..+...|...|++.++++++++-+.+....  .+....+   ....++.+.. + ..|++|-++|...  
T Consensus       176 GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~---~~~~~~~~~t~g~g~D~vie~~G~~~--  250 (350)
T COG1063         176 GAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED---DAGAEILELTGGRGADVVIEAVGSPP--  250 (350)
T ss_pred             CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc---cHHHHHHHHhCCCCCCEEEECCCCHH--
Confidence            5788999887777777778999999999998877664432  2222222   2222222222 3 6999999999421  


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                                             ..+.++...+++|++++++-....
T Consensus       251 -----------------------~~~~ai~~~r~gG~v~~vGv~~~~  274 (350)
T COG1063         251 -----------------------ALDQALEALRPGGTVVVVGVYGGE  274 (350)
T ss_pred             -----------------------HHHHHHHHhcCCCEEEEEeccCCc
Confidence                                   334445566889999999866553

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=93.93  E-value=0.95  Score=38.84  Aligned_cols=60  Identities=8%  Similarity=-0.014  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHhcCCeEEEEecCcchhH-HHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           8 IGYGIVKGLIQQFDGIIYLTARDASRGQ-EALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         8 iG~~~a~~la~~g~~~vi~~~r~~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      =|..+|+.|++. ++.|++.+|+.+..+ ...+.+.+.-+.-.++..++++       .-|++|.+...
T Consensus        31 gGspMArnLlkA-GheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa-------~ADVVIL~LPd   91 (341)
T TIGR01724        31 GGSRMAIEFAMA-GHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAK-------HGEIHVLFTPF   91 (341)
T ss_pred             CHHHHHHHHHHC-CCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHh-------CCCEEEEecCC
Confidence            478999999998 678888888876553 2233333322222223344443       57999987764

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PLN02740 Alcohol dehydrogenase-like

Probab=93.90  E-value=0.4  Score=41.93  Aligned_cols=71  Identities=14%  Similarity=0.192  Sum_probs=45.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCH-HHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDK-NSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| .|++|...+..+...|...|+.+++++++++... ++..   +|..+. +...+.+.++..  +.+|++|.++|.
T Consensus       204 V~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~--~g~dvvid~~G~  278 (381)
T PLN02740        204 IFG-LGAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTG--GGVDYSFECAGN  278 (381)
T ss_pred             EEC-CCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhC--CCCCEEEECCCC
Confidence            456 4899999888776675547888888887776553 2321   343332 123333444332  269999999995

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=93.89  E-value=0.34  Score=38.68  Aligned_cols=29  Identities=21%  Similarity=0.148  Sum_probs=25.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDAS   32 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~   32 (230)
                      |.||+|..+++.|+..|...+.+.+.+.-
T Consensus        28 G~GglGs~ia~~La~~Gv~~i~lvD~d~v   56 (202)
T TIGR02356        28 GAGGLGSPAALYLAGAGVGTIVIVDDDHV   56 (202)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecCCEE
Confidence            57999999999999998889999888743

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.83  E-value=0.074  Score=47.59  Aligned_cols=66  Identities=21%  Similarity=0.333  Sum_probs=40.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCC---CHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDIL---DKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s---~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |||+++ +|.++++.|+++ +..|++.+++........+.+..  .++.   +...   +..      ..+|+||+++|+
T Consensus        10 v~G~g~-~G~s~a~~l~~~-G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~------~~~d~vV~s~gi   78 (447)
T PRK02472         10 VLGLAK-SGYAAAKLLHKL-GANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLE---LLD------EDFDLMVKNPGI   78 (447)
T ss_pred             EEeeCH-HHHHHHHHHHHC-CCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHH---Hhc------CcCCEEEECCCC
Confidence            678876 999999999999 45777777665433333333332  1111   1111   111      148999999998


Q ss_pred             cc
Q psy7994          76 AF   77 (230)
Q Consensus        76 ~~   77 (230)
                      ..
T Consensus        79 ~~   80 (447)
T PRK02472         79 PY   80 (447)
T ss_pred             CC
Confidence            64

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=93.81  E-value=0.3  Score=42.06  Aligned_cols=88  Identities=14%  Similarity=0.095  Sum_probs=53.3

Q ss_pred             CCCCCCcHHHHHHHHHHH-hcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQ-QFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~-~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |+| +|+||...+..+.+ .|+..|+.+++++++++.+.+ . ..+..    ++.+.+    . .++|++|.++|..   
T Consensus       169 V~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~-~-~~~~~----~~~~~~----~-~g~d~viD~~G~~---  233 (341)
T cd08237         169 VWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF-A-DETYL----IDDIPE----D-LAVDHAFECVGGR---  233 (341)
T ss_pred             EEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh-c-Cceee----hhhhhh----c-cCCcEEEECCCCC---
Confidence            456 59999988877765 456678888888877765432 2 12211    111111    1 1589999999852   


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                          ...               ..++..+..++++|+++.++-
T Consensus       234 ----~~~---------------~~~~~~~~~l~~~G~iv~~G~  257 (341)
T cd08237         234 ----GSQ---------------SAINQIIDYIRPQGTIGLMGV  257 (341)
T ss_pred             ----ccH---------------HHHHHHHHhCcCCcEEEEEee
Confidence                011               122334455688899998874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=93.81  E-value=0.33  Score=41.10  Aligned_cols=69  Identities=14%  Similarity=0.137  Sum_probs=45.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHhhhc-----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEKLQK-----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~~~~-----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+||-+++++..|+.+|...|.+.+|+++   +.+...+.+..     ..+.+.++...    +.+...+.|+|||+...
T Consensus       131 GaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~----l~~~~~~aDivINaTp~  206 (288)
T PRK12749        131 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQA----FAEALASADILTNGTKV  206 (288)
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhh----hhhhcccCCEEEECCCC
Confidence            45788999999999998889999999854   66666665532     12222222111    11223478999998865


Q ss_pred             c
Q psy7994          76 A   76 (230)
Q Consensus        76 ~   76 (230)
                      .
T Consensus       207 G  207 (288)
T PRK12749        207 G  207 (288)
T ss_pred             C
Confidence            4

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=93.80  E-value=0.33  Score=37.24  Aligned_cols=71  Identities=13%  Similarity=0.176  Sum_probs=48.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------c-----ccCCCHHHHHHHHHH--HHhhcCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------K-----LDILDKNSIKALHDH--LEAEHGG   65 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~-----~D~s~~~~v~~~~~~--~~~~~~~   65 (230)
                      |.|-+|..++++|++. ++.|...+|++++.+...+.-.           +     .-+.+.++++.++..  +.....+
T Consensus         8 GlG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~   86 (163)
T PF03446_consen    8 GLGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRP   86 (163)
T ss_dssp             --SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-T
T ss_pred             chHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhcccc
Confidence            3478999999999999 6788889999988777654311           1     346788888888887  6665555


Q ss_pred             CcEEEEccCC
Q psy7994          66 VDVLVNNAAI   75 (230)
Q Consensus        66 id~lv~~ag~   75 (230)
                      =+++|++.-.
T Consensus        87 g~iiid~sT~   96 (163)
T PF03446_consen   87 GKIIIDMSTI   96 (163)
T ss_dssp             TEEEEE-SS-
T ss_pred             ceEEEecCCc
Confidence            5566655544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=93.60  E-value=0.17  Score=43.36  Aligned_cols=110  Identities=19%  Similarity=0.155  Sum_probs=59.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHH-----HHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKALH-----DHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~-----~~~~~~~~~id~lv~~ag   74 (230)
                      |+|++|.+|.+++..|+.++. ..++++++++.  +...     .|+.+-.....+.     +...+.+..-|++|.++|
T Consensus         4 IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a--~g~a-----~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG   76 (312)
T TIGR01772         4 VLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGA--AGVA-----ADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAG   76 (312)
T ss_pred             EECCCCHHHHHHHHHHHhCCCCcEEEEecCCCC--cEEE-----chhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCC
Confidence            679999999999999998864 47889988762  2111     2332211100000     001233458999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      .... +     ...-.+.+..|+.=.-.+.+.+.++ .+++.||++|-..
T Consensus        77 ~~~~-~-----g~~R~dll~~N~~I~~~i~~~i~~~-~p~~iiivvsNPv  119 (312)
T TIGR01772        77 VPRK-P-----GMTRDDLFNVNAGIVKDLVAAVAES-CPKAMILVITNPV  119 (312)
T ss_pred             CCCC-C-----CccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEEecCch
Confidence            8531 1     1223334555555333333333222 2345666666443

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=93.59  E-value=0.14  Score=46.49  Aligned_cols=65  Identities=17%  Similarity=0.242  Sum_probs=44.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ ||+|++++..|++.|. .|++.+|+.++.+...+.+.. ...+.+++.        .....|+||||....
T Consensus       337 IiGa-GgiG~aia~~L~~~G~-~V~i~~R~~~~~~~la~~~~~-~~~~~~~~~--------~l~~~DiVInatP~g  401 (477)
T PRK09310        337 IVGA-GGAAKAIATTLARAGA-ELLIFNRTKAHAEALASRCQG-KAFPLESLP--------ELHRIDIIINCLPPS  401 (477)
T ss_pred             EEcC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcc-ceechhHhc--------ccCCCCEEEEcCCCC
Confidence            4674 7999999999999965 888889988877766554421 111111111        134789999998764

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.55  E-value=0.5  Score=40.12  Aligned_cols=70  Identities=14%  Similarity=0.108  Sum_probs=42.3

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      +||++++|..++...... +..|+.+.+++++.+...+ +..   +|..+.+-.+.+ .++... ..+|+++.+.|.
T Consensus       150 ~~g~g~vG~~a~q~a~~~-G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~v-~~~~~~-~~~d~vid~~g~  222 (324)
T cd08291         150 TAAASALGRMLVRLCKAD-GIKVINIVRRKEQVDLLKK-IGAEYVLNSSDPDFLEDL-KELIAK-LNATIFFDAVGG  222 (324)
T ss_pred             ccCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH-cCCcEEEECCCccHHHHH-HHHhCC-CCCcEEEECCCc
Confidence            489999999987655555 5578888888776665533 321   343333322332 222211 269999998884

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=93.55  E-value=0.51  Score=41.01  Aligned_cols=71  Identities=18%  Similarity=0.217  Sum_probs=47.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCH-HHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDK-NSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| ++++|...+..+...|...|+.+++++++++.. .++..   +|..+. +++.+.+.++..  +.+|++|.+.|.
T Consensus       192 V~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~~v~~~~~--~g~d~vid~~g~  266 (368)
T cd08300         192 VFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATDCVNPKDHDKPIQQVLVEMTD--GGVDYTFECIGN  266 (368)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCEEEcccccchHHHHHHHHHhC--CCCcEEEECCCC
Confidence            466 589999988877777554788888888877654 33321   344433 234455555433  379999999885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02827 Alcohol dehydrogenase-like

Probab=93.53  E-value=0.63  Score=40.76  Aligned_cols=71  Identities=14%  Similarity=0.211  Sum_probs=44.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCH-HHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDK-NSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| +|++|...+......|...|+.+++++++.+.+ .++..   +|..+. +...+.+.++..  +.+|++|.++|.
T Consensus       199 V~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lGa~~~i~~~~~~~~~~~~v~~~~~--~g~d~vid~~G~  273 (378)
T PLN02827        199 IFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFGVTDFINPNDLSEPIQQVIKRMTG--GGADYSFECVGD  273 (378)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcEEEcccccchHHHHHHHHHhC--CCCCEEEECCCC
Confidence            456 589999988877677555677777777766544 33321   333332 234444444432  369999999985

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=93.53  E-value=0.11  Score=45.85  Aligned_cols=69  Identities=22%  Similarity=0.183  Sum_probs=43.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH---HHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA---LEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~---~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.||+|.+|.++.+.|.++....|....+.....+..   ...+...|+.+.++++..  .    +..+|++|.+.+.
T Consensus        43 IvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~--~----~~~~DvVf~Alp~  114 (381)
T PLN02968         43 VLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDA--D----FSDVDAVFCCLPH  114 (381)
T ss_pred             EECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHH--H----hcCCCEEEEcCCH
Confidence            5799999999999999999666777776654433222   222222344433333321  1    2369999987764

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=93.52  E-value=0.34  Score=37.81  Aligned_cols=86  Identities=14%  Similarity=0.126  Sum_probs=53.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |.|.||+++++.|... +..|+..+|+..........    .+ ...++++++.       .-|+|+++...... +.. 
T Consensus        43 G~G~IG~~vA~~l~~f-G~~V~~~d~~~~~~~~~~~~----~~-~~~~l~ell~-------~aDiv~~~~plt~~-T~~-  107 (178)
T PF02826_consen   43 GYGRIGRAVARRLKAF-GMRVIGYDRSPKPEEGADEF----GV-EYVSLDELLA-------QADIVSLHLPLTPE-TRG-  107 (178)
T ss_dssp             STSHHHHHHHHHHHHT-T-EEEEEESSCHHHHHHHHT----TE-EESSHHHHHH-------H-SEEEE-SSSSTT-TTT-
T ss_pred             EEcCCcCeEeeeeecC-CceeEEecccCChhhhcccc----cc-eeeehhhhcc-------hhhhhhhhhccccc-cce-
Confidence            5689999999999988 66899999988755522111    11 2335566666       47999888876421 111 


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                                        .+-+..+..|+++..+||++-
T Consensus       108 ------------------li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  108 ------------------LINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             ------------------SBSHHHHHTSTTTEEEEESSS
T ss_pred             ------------------eeeeeeeeccccceEEEeccc
Confidence                              112334556788889999875

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=93.49  E-value=0.55  Score=41.45  Aligned_cols=108  Identities=12%  Similarity=0.100  Sum_probs=59.9

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      .|+|+||..++..+...|...|+..++++++++.+.+ +..  ++.....+..+.+.++... ..+|++|.+.|......
T Consensus       192 ~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~-~Ga~~v~~~~~~~~~~~v~~~~~~-~g~Dvvid~~G~~~~~~  269 (393)
T TIGR02819       192 AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARS-FGCETVDLSKDATLPEQIEQILGE-PEVDCAVDCVGFEARGH  269 (393)
T ss_pred             ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHH-cCCeEEecCCcccHHHHHHHHcCC-CCCcEEEECCCCccccc
Confidence            4679999998887767766566656666655554432 321  3333323333333333221 25999999999642110


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      ..+..        .   ...-..++..+..++++|+|++++..
T Consensus       270 ~~~~~--------~---~~~~~~~~~~~~~~~~~G~i~~~G~~  301 (393)
T TIGR02819       270 GHDGK--------K---EAPATVLNSLMEVTRVGGAIGIPGLY  301 (393)
T ss_pred             ccccc--------c---cchHHHHHHHHHHhhCCCEEEEeeec
Confidence            00000        0   02222344445667899999998864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=93.48  E-value=0.13  Score=42.72  Aligned_cols=68  Identities=21%  Similarity=0.248  Sum_probs=47.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-h--hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-L--QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-~--~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|||+- |+.++..|.++ +..|+...++....+..... .  ...+..|.+++..++.+-     ++|+||+.+.-
T Consensus         5 vlGGT~e-gr~la~~L~~~-g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~-----~i~~VIDAtHP   75 (256)
T TIGR00715         5 LMGGTVD-SRAIAKGLIAQ-GIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRH-----SIDILVDATHP   75 (256)
T ss_pred             EEechHH-HHHHHHHHHhC-CCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhc-----CCCEEEEcCCH
Confidence            5789887 99999999998 46777777776544333221 0  114667777777777643     79999987754

This enzyme was found to be a monomer by gel filtration.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=93.47  E-value=0.25  Score=44.08  Aligned_cols=66  Identities=15%  Similarity=0.288  Sum_probs=46.8

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      .| +|.+|..+++.|...|...|++.+|+.++.....+.+.. ...+.+++.+.+.       ..|+||.+.+..
T Consensus       186 iG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~-~~i~~~~l~~~l~-------~aDvVi~aT~s~  251 (417)
T TIGR01035       186 IG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG-EAVKFEDLEEYLA-------EADIVISSTGAP  251 (417)
T ss_pred             EC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC-eEeeHHHHHHHHh-------hCCEEEECCCCC
Confidence            44 499999999999998668999999998887766665532 2223333333332       689999987754

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=93.44  E-value=0.64  Score=37.77  Aligned_cols=71  Identities=13%  Similarity=0.200  Sum_probs=49.4

Q ss_pred             CCCcHHHHHHHHHHHh--cCCeEEEEecCcchhHHHHHhhhc----------------ccCCCHHHHHHHHHHHHhhcCC
Q psy7994           4 ANKGIGYGIVKGLIQQ--FDGIIYLTARDASRGQEALEKLQK----------------LDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         4 ~s~giG~~~a~~la~~--g~~~vi~~~r~~~~~~~~~~~~~~----------------~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      |+|.||..+++.+-+.  ....+++++|+.++..+....+..                .....++.++..+.++.+.  +
T Consensus         7 GcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~ide~~~~~DlvVEaAS~~Av~e~~~~~L~~--g   84 (255)
T COG1712           7 GCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVSDIDELIAEVDLVVEAASPEAVREYVPKILKA--G   84 (255)
T ss_pred             eccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccccHHHHhhccceeeeeCCHHHHHHHhHHHHhc--C
Confidence            5789999999866643  144678888998888766555443                2334556666666666554  7


Q ss_pred             CcEEEEccCCc
Q psy7994          66 VDVLVNNAAIA   76 (230)
Q Consensus        66 id~lv~~ag~~   76 (230)
                      +|++|.+.|-.
T Consensus        85 ~d~iV~SVGAL   95 (255)
T COG1712          85 IDVIVMSVGAL   95 (255)
T ss_pred             CCEEEEechhc
Confidence            88888888874

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=93.44  E-value=0.29  Score=43.71  Aligned_cols=65  Identities=14%  Similarity=0.188  Sum_probs=46.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|.+|..+++.|...|...|++.+|++++.......+. .++.+.+++...+       ...|+||.+.|..
T Consensus       189 GaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g-~~~~~~~~~~~~l-------~~aDvVI~aT~s~  253 (423)
T PRK00045        189 GAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG-GEAIPLDELPEAL-------AEADIVISSTGAP  253 (423)
T ss_pred             CchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC-CcEeeHHHHHHHh-------ccCCEEEECCCCC
Confidence            459999999999999876789999999988877766653 2333333333322       3689999988754

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=93.38  E-value=0.44  Score=40.11  Aligned_cols=71  Identities=20%  Similarity=0.232  Sum_probs=44.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+++++|.+++..+... +..|+.+.++.++.+.. ..+..   .|..+.+..+.+.+.. . ..++|+++++.|.
T Consensus       148 I~g~~~~~g~~~~~la~~~-g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~d~vl~~~g~  221 (324)
T cd08244         148 VTAAAGGLGSLLVQLAKAA-GATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVREAL-G-GGGVTVVLDGVGG  221 (324)
T ss_pred             EEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHc-C-CCCceEEEECCCh
Confidence            6799999999988877777 55778888777766544 33321   3333333333332211 1 1259999999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=93.34  E-value=0.5  Score=39.39  Aligned_cols=117  Identities=14%  Similarity=0.082  Sum_probs=62.0

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCC
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSS   82 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~   82 (230)
                      -|+|+....++..+...  ..|+.++.++..++...+.+....+.+-+-+..-........+..|.|+.++--+..+.+.
T Consensus        80 ag~G~kt~~la~~~~~~--g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~~fD~Vl~D~Pcsg~G~~~  157 (264)
T TIGR00446        80 AAPGGKTTQISALMKNE--GAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFGAAVPKFDAILLDAPCSGEGVIR  157 (264)
T ss_pred             CCchHHHHHHHHHcCCC--CEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhhhhccCCCEEEEcCCCCCCcccc
Confidence            34566666676655433  3788899999888777666654222111100000111111234699999876543322222


Q ss_pred             CCChhHH---HHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          83 EPFGSQA---LHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        83 ~~~~~~~---~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      ..+...|   .+.+.....-...+++..+++++++|++|+.+
T Consensus       158 ~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYst  199 (264)
T TIGR00446       158 KDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYST  199 (264)
T ss_pred             cChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            1111111   11222223334557788888889999998765

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=93.28  E-value=0.8  Score=38.88  Aligned_cols=89  Identities=13%  Similarity=0.205  Sum_probs=55.6

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCC
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNS   81 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~   81 (230)
                      .| .|++|+.++..|...| ..|.+.+|++++.+... .+ .+.....+++.       +.....|+||+++...     
T Consensus       158 iG-~G~iG~~~a~~L~~~G-a~V~v~~r~~~~~~~~~-~~-G~~~~~~~~l~-------~~l~~aDiVI~t~p~~-----  221 (296)
T PRK08306        158 LG-FGRTGMTLARTLKALG-ANVTVGARKSAHLARIT-EM-GLSPFHLSELA-------EEVGKIDIIFNTIPAL-----  221 (296)
T ss_pred             EC-CcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHH-Hc-CCeeecHHHHH-------HHhCCCCEEEECCChh-----
Confidence            45 4789999999999995 58888899876544332 22 12222222222       2234789999976321     


Q ss_pred             CCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc
Q psy7994          82 SEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        82 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                                          .+.+..+..|++++.||.+++..+.
T Consensus       222 --------------------~i~~~~l~~~~~g~vIIDla~~pgg  246 (296)
T PRK08306        222 --------------------VLTKEVLSKMPPEALIIDLASKPGG  246 (296)
T ss_pred             --------------------hhhHHHHHcCCCCcEEEEEccCCCC
Confidence                                1233445567778888888887663

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=93.19  E-value=0.71  Score=39.77  Aligned_cols=95  Identities=19%  Similarity=0.199  Sum_probs=56.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCH--HHHHHHHHHHHhhcCCCc----EEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDK--NSIKALHDHLEAEHGGVD----VLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~--~~v~~~~~~~~~~~~~id----~lv~   71 (230)
                      |.|+ |++|..++..+...|. .|+.+++++++++.. .++..   +|..+.  +.+.+.+.++.... .+|    .++.
T Consensus       172 V~G~-G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~-g~d~~~d~v~d  247 (349)
T TIGR03201       172 VIGA-GGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMM-KGFGADLTLNPKDKSAREVKKLIKAFAKAR-GLRSTGWKIFE  247 (349)
T ss_pred             EECC-CHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHH-HHhCCceEecCccccHHHHHHHHHhhcccC-CCCCCcCEEEE
Confidence            5677 9999998776666644 788888888877654 33321   333332  23333333332221 344    7887


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      ++|..                         ...+..++.++++|+++.++...
T Consensus       248 ~~g~~-------------------------~~~~~~~~~l~~~G~iv~~G~~~  275 (349)
T TIGR03201       248 CSGSK-------------------------PGQESALSLLSHGGTLVVVGYTM  275 (349)
T ss_pred             CCCCh-------------------------HHHHHHHHHHhcCCeEEEECcCC
Confidence            88752                         01222344567889999987654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=93.14  E-value=0.29  Score=41.61  Aligned_cols=111  Identities=18%  Similarity=0.140  Sum_probs=63.0

Q ss_pred             CCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCC-CHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           2 TGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDIL-DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s-~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      .|+ |++|.+++..|+..|- ..+++.++++++++....++..+-.. ....+.. -.. .+.+..-|++|.++|.... 
T Consensus         4 iGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~-~~~-~~~l~~aDiVIitag~p~~-   79 (300)
T cd00300           4 IGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR-GGD-YADAADADIVVITAGAPRK-   79 (300)
T ss_pred             ECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE-CCC-HHHhCCCCEEEEcCCCCCC-
Confidence            454 7899999999999854 47999999998888777766552111 0000000 000 1233579999999998532 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      +  ..+   -...+..|+.=...+.+.+.+.- +++.+|++|.
T Consensus        80 ~--~~~---R~~l~~~n~~i~~~~~~~i~~~~-p~~~viv~sN  116 (300)
T cd00300          80 P--GET---RLDLINRNAPILRSVITNLKKYG-PDAIILVVSN  116 (300)
T ss_pred             C--CCC---HHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccC
Confidence            1  111   23344444444444444443222 4466666664

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=93.13  E-value=0.35  Score=40.99  Aligned_cols=84  Identities=13%  Similarity=0.079  Sum_probs=51.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      |+| +|++|...+..+...|...|+.+++++++++.... ..-.|.   ++.         .-.++|++|.+.|..    
T Consensus       150 V~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~-~~~i~~---~~~---------~~~g~Dvvid~~G~~----  211 (308)
T TIGR01202       150 IVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG-YEVLDP---EKD---------PRRDYRAIYDASGDP----  211 (308)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh-ccccCh---hhc---------cCCCCCEEEECCCCH----
Confidence            455 68999988876666666667777777666554322 111221   110         113689999998852    


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                           ...+.+++.++++|+++.++..
T Consensus       212 ---------------------~~~~~~~~~l~~~G~iv~~G~~  233 (308)
T TIGR01202       212 ---------------------SLIDTLVRRLAKGGEIVLAGFY  233 (308)
T ss_pred             ---------------------HHHHHHHHhhhcCcEEEEEeec
Confidence                                 0123344566889999988754

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=92.99  E-value=0.7  Score=39.70  Aligned_cols=95  Identities=26%  Similarity=0.305  Sum_probs=56.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+| ++++|..++..+...|...|+.+++++++.+... ++..   +|..+.+-.+.+. +... -+.+|+++.+.|.. 
T Consensus       178 I~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~l~-~~~~-~~~~d~vid~~g~~-  252 (351)
T cd08233         178 VLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLDPTEVDVVAEVR-KLTG-GGGVDVSFDCAGVQ-  252 (351)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCCccCHHHHHH-HHhC-CCCCCEEEECCCCH-
Confidence            456 4799999888777775547888888777665442 2221   3444433223222 2211 12499999999852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                               +               .++..+..+++.|+++.++...
T Consensus       253 ---------~---------------~~~~~~~~l~~~G~~v~~g~~~  275 (351)
T cd08233         253 ---------A---------------TLDTAIDALRPRGTAVNVAIWE  275 (351)
T ss_pred             ---------H---------------HHHHHHHhccCCCEEEEEccCC
Confidence                     0               1233344557788988887643

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=92.98  E-value=0.78  Score=36.83  Aligned_cols=62  Identities=16%  Similarity=0.142  Sum_probs=41.3

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhhhc-------------ccC----CCHHHHHHHHHHHHhhc
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKLQK-------------LDI----LDKNSIKALHDHLEAEH   63 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~~~-------------~D~----s~~~~v~~~~~~~~~~~   63 (230)
                      .||+|-||.+++++|++.| +.|++. +|.++......+.+..             +|+    --.+.+..++.++...+
T Consensus         6 i~GtGniG~alA~~~a~ag-~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l~~~~   84 (211)
T COG2085           6 IIGTGNIGSALALRLAKAG-HEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAELRDAL   84 (211)
T ss_pred             EeccChHHHHHHHHHHhCC-CeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHHHHHh
Confidence            4789999999999999995 555555 5566655555444332             343    23456667777777665


Q ss_pred             C
Q psy7994          64 G   64 (230)
Q Consensus        64 ~   64 (230)
                      +
T Consensus        85 ~   85 (211)
T COG2085          85 G   85 (211)
T ss_pred             C
Confidence            5

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=92.95  E-value=0.62  Score=40.00  Aligned_cols=94  Identities=11%  Similarity=0.151  Sum_probs=55.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCc-EEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVD-VLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id-~lv~~ag~~   76 (230)
                      |+| ++++|..++......|...|+.+++++++.+.. +++..   +|..+.. .+.+.+.. .. .++| ++|.++|..
T Consensus       166 V~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~i~~~~~~-~~~~~~~~-~~-~~~d~~v~d~~G~~  240 (347)
T PRK10309        166 IIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSLGAMQTFNSREMS-APQIQSVL-RE-LRFDQLILETAGVP  240 (347)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCceEecCcccC-HHHHHHHh-cC-CCCCeEEEECCCCH
Confidence            465 589999988777777555678888887776643 33321   2333222 22322222 11 2677 888888852


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               ..+...+..++++|+++.++...
T Consensus       241 -------------------------~~~~~~~~~l~~~G~iv~~G~~~  263 (347)
T PRK10309        241 -------------------------QTVELAIEIAGPRAQLALVGTLH  263 (347)
T ss_pred             -------------------------HHHHHHHHHhhcCCEEEEEccCC
Confidence                                     01222344557889988887543

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=92.78  E-value=0.59  Score=41.07  Aligned_cols=30  Identities=17%  Similarity=0.123  Sum_probs=26.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcch
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASR   33 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~   33 (230)
                      |.||+|..+++.|+..|...+.+++++.-.
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~  171 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVD  171 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEec
Confidence            668999999999999988899999887433

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=92.66  E-value=0.29  Score=39.82  Aligned_cols=66  Identities=20%  Similarity=0.245  Sum_probs=48.6

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH-hhh----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-KLQ----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~-~~~----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      -|.|-+|..+|+.|.++ ++.|+++.+++++.++... ++.    .+|.++++.++++=      ....|++|-..|-
T Consensus         6 iG~G~vG~~va~~L~~~-g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~ag------i~~aD~vva~t~~   76 (225)
T COG0569           6 IGAGRVGRSVARELSEE-GHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAG------IDDADAVVAATGN   76 (225)
T ss_pred             ECCcHHHHHHHHHHHhC-CCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcC------CCcCCEEEEeeCC
Confidence            36788999999999999 7799999999998877444 222    27888887776661      1267777766664

>cd08230 glucose_DH Glucose dehydrogenase

Probab=92.63  E-value=0.75  Score=39.71  Aligned_cols=91  Identities=18%  Similarity=0.224  Sum_probs=53.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec---CcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR---DASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r---~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+| +|++|...+..+...| ..|+.+++   ++++++ .++++..  .|..++ .+.+    . ...+.+|++|.++|.
T Consensus       178 I~G-~G~vG~~a~q~ak~~G-~~vi~~~~~~~~~~~~~-~~~~~Ga~~v~~~~~-~~~~----~-~~~~~~d~vid~~g~  248 (355)
T cd08230         178 VLG-AGPIGLLAALLLRLRG-FEVYVLNRRDPPDPKAD-IVEELGATYVNSSKT-PVAE----V-KLVGEFDLIIEATGV  248 (355)
T ss_pred             EEC-CCHHHHHHHHHHHHcC-CeEEEEecCCCCHHHHH-HHHHcCCEEecCCcc-chhh----h-hhcCCCCEEEECcCC
Confidence            566 4999999887666664 47888877   344444 3333321  333322 2222    1 122579999999985


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      ..                         .+...+..++++|+++.++...+
T Consensus       249 ~~-------------------------~~~~~~~~l~~~G~~v~~G~~~~  273 (355)
T cd08230         249 PP-------------------------LAFEALPALAPNGVVILFGVPGG  273 (355)
T ss_pred             HH-------------------------HHHHHHHHccCCcEEEEEecCCC
Confidence            20                         12333445688899998876544

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=92.50  E-value=0.65  Score=41.13  Aligned_cols=74  Identities=14%  Similarity=0.138  Sum_probs=44.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhc--CCeEEEEecCcchhHHHHHhhh------c-----ccCCCHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQF--DGIIYLTARDASRGQEALEKLQ------K-----LDILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g--~~~vi~~~r~~~~~~~~~~~~~------~-----~D~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      |.|++|++|...+..+...|  ...|+.+++++++++...+.+.      .     .|..+.++..+.+.++... ..+|
T Consensus       181 V~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g-~g~D  259 (410)
T cd08238         181 ILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTGG-QGFD  259 (410)
T ss_pred             EEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhCC-CCCC
Confidence            56889999998777555443  3478888998888776544311      1     2322222333333333221 2699


Q ss_pred             EEEEccCC
Q psy7994          68 VLVNNAAI   75 (230)
Q Consensus        68 ~lv~~ag~   75 (230)
                      ++|.+.|.
T Consensus       260 ~vid~~g~  267 (410)
T cd08238         260 DVFVFVPV  267 (410)
T ss_pred             EEEEcCCC
Confidence            99998874

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=92.36  E-value=0.93  Score=38.17  Aligned_cols=71  Identities=8%  Similarity=-0.027  Sum_probs=42.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+++++|.+++...... +..++.+.++.++.+...+ +..   .+..+.+ ..+.+.++... .++|+++.+.|.
T Consensus       145 I~g~~g~ig~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~i~~~~~~-~~~d~v~d~~g~  218 (324)
T cd08292         145 QNAAGGAVGKLVAMLAAAR-GINVINLVRRDAGVAELRA-LGIGPVVSTEQPG-WQDKVREAAGG-APISVALDSVGG  218 (324)
T ss_pred             EcccccHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHh-cCCCEEEcCCCch-HHHHHHHHhCC-CCCcEEEECCCC
Confidence            5689999999988866666 5577777776665554433 211   2333222 22222222211 269999998885

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=92.30  E-value=1.2  Score=38.63  Aligned_cols=71  Identities=17%  Similarity=0.239  Sum_probs=44.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCH-HHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDK-NSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| ++++|...+..+...|...|+.+++++++.+.+ +++..   +|..+. +.+.+.+.++..  +.+|+++.+.|.
T Consensus       193 V~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~v~~~~~--~~~d~vid~~G~  267 (369)
T cd08301         193 IFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFVNPKDHDKPVQEVIAEMTG--GGVDYSFECTGN  267 (369)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEEcccccchhHHHHHHHHhC--CCCCEEEECCCC
Confidence            456 489999988766666544788888888776654 33321   233332 234444444433  269999999885

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN00203 glutamyl-tRNA reductase

Probab=92.28  E-value=0.47  Score=43.54  Aligned_cols=66  Identities=15%  Similarity=0.130  Sum_probs=47.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc--cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL--DILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~--D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|++|..+++.|...|...|++.+|+.++.+...+.+...  .+...++....+       ...|+||.+.+..
T Consensus       273 GAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al-------~~aDVVIsAT~s~  340 (519)
T PLN00203        273 GAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACA-------AEADVVFTSTSSE  340 (519)
T ss_pred             eCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHH-------hcCCEEEEccCCC
Confidence            34999999999999997678999999999888877765322  222333333333       3689999887654

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=92.26  E-value=0.66  Score=39.61  Aligned_cols=111  Identities=17%  Similarity=0.178  Sum_probs=60.6

Q ss_pred             CCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           2 TGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      .|+ |.+|..++..|+.+|. ..|+++++++++.+.....+..+-..... ..-.... .+.+..-|++|.++|..... 
T Consensus         6 IGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~-~~i~~~d-~~~l~~aDiViita~~~~~~-   81 (308)
T cd05292           6 VGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKP-VRIYAGD-YADCKGADVVVITAGANQKP-   81 (308)
T ss_pred             ECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCC-eEEeeCC-HHHhCCCCEEEEccCCCCCC-
Confidence            455 8999999999999863 68999999988776544444432100000 0000001 11235789999999985321 


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                           .+...+.+..|..-.-.+.+.+..+ .+++.|+.++.
T Consensus        82 -----~~~r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~tN  117 (308)
T cd05292          82 -----GETRLDLLKRNVAIFKEIIPQILKY-APDAILLVVTN  117 (308)
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence                 1222334444444444444443331 13466666543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=92.08  E-value=1.1  Score=38.87  Aligned_cols=65  Identities=20%  Similarity=0.234  Sum_probs=38.3

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      .|+|++|..++...... +..|+.++.+.++......++..   +|..+.+.+.+       ..+.+|++|.+.|.
T Consensus       190 ~G~G~vG~~avq~Ak~~-Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~-------~~~~~D~vid~~g~  257 (360)
T PLN02586        190 AGLGGLGHVAVKIGKAF-GLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA-------AIGTMDYIIDTVSA  257 (360)
T ss_pred             ECCCHHHHHHHHHHHHC-CCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh-------hcCCCCEEEECCCC
Confidence            34699999987766666 44666666666555444444322   23333322222       22468999999884

>PRK06849 hypothetical protein; Provisional

Probab=92.08  E-value=0.95  Score=39.79  Aligned_cols=72  Identities=10%  Similarity=0.110  Sum_probs=45.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH---HHhhhcc--cCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA---LEKLQKL--DILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~---~~~~~~~--D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |||++..+|.++++.|.+. +..|++++.++......   ...+..+  .-.+++.....+.++.++. ++|+||-...
T Consensus         9 I~G~~~~~~l~iar~l~~~-G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~vIP~~e   85 (389)
T PRK06849          9 ITGARAPAALELARLFHNA-GHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRE-NIDLLIPTCE   85 (389)
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHc-CCCEEEECCh
Confidence            7999999999999999999 56777777776443322   2222222  1224443334444444443 5899997765

>KOG1196|consensus

Probab=92.07  E-value=0.56  Score=39.72  Aligned_cols=93  Identities=15%  Similarity=0.216  Sum_probs=63.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcC-CCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHG-GVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~-~id~lv~~ag~~   76 (230)
                      |.||+|..|. ++-+||+.-++.|+...-+.++.+-...++-.   +|.-++..+.+++.+.   ++ .||+.+-|.|..
T Consensus       159 VSaAsGAvGq-l~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~---~P~GIDiYfeNVGG~  234 (343)
T KOG1196|consen  159 VSAASGAVGQ-LVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRC---FPEGIDIYFENVGGK  234 (343)
T ss_pred             EeeccchhHH-HHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHh---CCCcceEEEeccCcH
Confidence            4678888885 55668877566888777788777766666543   4556666777777653   43 899999999973


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                                +.++.+..|+.+|||+.-+-+
T Consensus       235 --------------------------~lDavl~nM~~~gri~~CG~I  255 (343)
T KOG1196|consen  235 --------------------------MLDAVLLNMNLHGRIAVCGMI  255 (343)
T ss_pred             --------------------------HHHHHHHhhhhccceEeeeee
Confidence                                      334455556777887765533

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=92.04  E-value=0.83  Score=38.57  Aligned_cols=72  Identities=13%  Similarity=0.160  Sum_probs=41.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+++++|.+++..+...| ..++.+.+++++.+... .+..   .+..+.+...+.+.+... -..+|+++++.|.
T Consensus       146 I~ga~g~~g~~~~~~a~~~g-~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~i~~~~~  220 (334)
T PTZ00354        146 IHAGASGVGTAAAQLAEKYG-AATIITTSSEEKVDFCK-KLAAIILIRYPDEEGFAPKVKKLTG-EKGVNLVLDCVGG  220 (334)
T ss_pred             EEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHH-HcCCcEEEecCChhHHHHHHHHHhC-CCCceEEEECCch
Confidence            57899999999988887774 45556777776655552 2221   222222212222222211 1269999998763

>KOG0025|consensus

Probab=91.95  E-value=1.6  Score=36.93  Aligned_cols=73  Identities=15%  Similarity=0.236  Sum_probs=50.7

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc---cCCCHHHHH-HHHHHHHhhcCCCcEEEEccCCc
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---DILDKNSIK-ALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~---D~s~~~~v~-~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||++++|.++...-... +..-+.+.|+.+..+++.+.+..+   .+-.++++. +-..+....++++..-+||.|.-
T Consensus       168 ganS~VG~~ViQlaka~-GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGk  244 (354)
T KOG0025|consen  168 GANSGVGQAVIQLAKAL-GIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGK  244 (354)
T ss_pred             CcccHHHHHHHHHHHHh-CcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCch
Confidence            78999999987644444 566677788888888887777662   233344433 44444445678999999999973

>cd05295 MDH_like Malate dehydrogenase-like

Probab=91.86  E-value=0.72  Score=41.48  Aligned_cols=114  Identities=13%  Similarity=0.109  Sum_probs=62.6

Q ss_pred             CCCCCCcHHHHHHHHHHHh---cCC---eEEEEec--CcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ---FDG---IIYLTAR--DASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~---g~~---~vi~~~r--~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|-||+++...++.-   |..   .+++++.  +.+.++....++..+=..-...+. +...-.+.+...|++|..
T Consensus       128 vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~-i~~~~~ea~~daDvvIit  206 (452)
T cd05295         128 ITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGIS-VTTDLDVAFKDAHVIVLL  206 (452)
T ss_pred             EecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcE-EEECCHHHhCCCCEEEEC
Confidence            7999999999999999982   222   3566776  566666666665541100000000 000112234589999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      +|.... +     .++-.+.++.|..=.-.+.+.+.+.-.+..+|+.+.
T Consensus       207 ag~prk-~-----G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~  249 (452)
T cd05295         207 DDFLIK-E-----GEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAG  249 (452)
T ss_pred             CCCCCC-c-----CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence            998532 1     122344566665555555555544333334444444

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=91.80  E-value=1.5  Score=37.62  Aligned_cols=74  Identities=15%  Similarity=0.132  Sum_probs=43.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-ccCCCH-HHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-LDILDK-NSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.| +|.+|..++..++.+|...|++.+++++.......++.. .+.... ..+.. .... +.+..-|+||.++|...
T Consensus        11 IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~-~~d~-~~l~~aDiVI~tag~~~   86 (321)
T PTZ00082         11 LIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG-TNNY-EDIAGSDVVIVTAGLTK   86 (321)
T ss_pred             EEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE-CCCH-HHhCCCCEEEECCCCCC
Confidence            456 588999999999998655799999988865432221111 000000 00100 0001 12347899999999854

>PTZ00117 malate dehydrogenase; Provisional

Probab=91.73  E-value=1.2  Score=38.26  Aligned_cols=73  Identities=21%  Similarity=0.212  Sum_probs=43.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhccc-CCCH-HHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLD-ILDK-NSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D-~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|+ |.+|..++..++..|...|++.+++++.++....++..+. .... ..+.. ..... .+..-|+||.++|..
T Consensus        10 IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~~-~l~~ADiVVitag~~   84 (319)
T PTZ00117         10 MIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNYE-DIKDSDVVVITAGVQ   84 (319)
T ss_pred             EECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCHH-HhCCCCEEEECCCCC
Confidence            4675 8899999999998864679999998876553332222210 0000 00000 01111 234789999999974

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=91.71  E-value=0.48  Score=46.89  Aligned_cols=65  Identities=15%  Similarity=0.132  Sum_probs=51.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCe-------------EEEEecCcchhHHHHHhh-----hcccCCCHHHHHHHHHHHHhhcCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGI-------------IYLTARDASRGQEALEKL-----QKLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~-------------vi~~~r~~~~~~~~~~~~-----~~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      |+|.+|...++.|++.....             |.+.+++.+.++...+.+     ...|++|.+++.++++       .
T Consensus       576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~-------~  648 (1042)
T PLN02819        576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS-------Q  648 (1042)
T ss_pred             CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc-------C
Confidence            35999999999999874433             777888888888776655     2479999988877765       5


Q ss_pred             CcEEEEccCC
Q psy7994          66 VDVLVNNAAI   75 (230)
Q Consensus        66 id~lv~~ag~   75 (230)
                      +|+||++...
T Consensus       649 ~DaVIsalP~  658 (1042)
T PLN02819        649 VDVVISLLPA  658 (1042)
T ss_pred             CCEEEECCCc
Confidence            9999999876

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=91.66  E-value=1.6  Score=37.83  Aligned_cols=71  Identities=15%  Similarity=0.182  Sum_probs=43.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCH-HHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDK-NSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| ++++|...+......|...|+.+++++++.+... ++..   +|..+. ..+.+.+.++..  +.+|++|.+.|.
T Consensus       190 V~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~--~g~d~vid~~g~  264 (365)
T cd08277         190 VFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAK-EFGATDFINPKDSDKPVSEVIREMTG--GGVDYSFECTGN  264 (365)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCCcEeccccccchHHHHHHHHhC--CCCCEEEECCCC
Confidence            455 5899999888666665547888888877766542 2321   233221 122333333333  479999999885

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=91.54  E-value=1.7  Score=36.51  Aligned_cols=71  Identities=11%  Similarity=0.086  Sum_probs=42.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+++++|.+++..+... +..++.+.++.++.+.. .++.-   .+..+.+..+.+ .+... ...+|+++.+.|.
T Consensus       144 I~g~~~~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~-~~~~~-~~~~d~vl~~~g~  217 (323)
T cd05282         144 QNAANSAVGRMLIQLAKLL-GFKTINVVRRDEQVEEL-KALGADEVIDSSPEDLAQRV-KEATG-GAGARLALDAVGG  217 (323)
T ss_pred             EcccccHHHHHHHHHHHHC-CCeEEEEecChHHHHHH-HhcCCCEEecccchhHHHHH-HHHhc-CCCceEEEECCCC
Confidence            5789999999988877777 55677777776665544 33321   233332222222 22211 1269999998885

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=91.50  E-value=1.1  Score=37.67  Aligned_cols=69  Identities=19%  Similarity=0.109  Sum_probs=40.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+++++|.+++...... +..|+.+.+++++.+... ++..   .|..+.  .......+..  +.+|+++++.|.
T Consensus       152 I~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~--~~~~~~~~~~--~~~d~vi~~~~~  223 (325)
T cd05280         152 VTGATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLK-SLGASEVLDREDL--LDESKKPLLK--ARWAGAIDTVGG  223 (325)
T ss_pred             EECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH--HHHHHHHhcC--CCccEEEECCch
Confidence            5789999999988755555 556888888877665542 2321   222211  1122222211  258999988763

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PLN02602 lactate dehydrogenase

Probab=91.36  E-value=1.5  Score=38.20  Aligned_cols=74  Identities=20%  Similarity=0.232  Sum_probs=47.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhccc-CCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLD-ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~~D-~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |.+|.+++..|+..+-. .+++++.++++++....++..+- +.....+... .. .+.+..-|++|.+||...
T Consensus        42 IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~-~d-y~~~~daDiVVitAG~~~  117 (350)
T PLN02602         42 VVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILAS-TD-YAVTAGSDLCIVTAGARQ  117 (350)
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeC-CC-HHHhCCCCEEEECCCCCC
Confidence            5674 99999999999987653 79999999888777766665421 1111111100 00 112357999999999853

>PRK06223 malate dehydrogenase; Reviewed

Probab=91.32  E-value=0.58  Score=39.74  Aligned_cols=73  Identities=18%  Similarity=0.191  Sum_probs=43.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc-cCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-DILD-KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~-D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|+ |-+|..++..++.+|...|++.+++++.++....++... .... ...+.. .... +.+..-|++|.++|..
T Consensus         7 VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d~-~~~~~aDiVii~~~~p   81 (307)
T PRK06223          7 IIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG-TNDY-EDIAGSDVVVITAGVP   81 (307)
T ss_pred             EECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe-CCCH-HHHCCCCEEEECCCCC
Confidence            4576 888999999999985238999999887765443333221 0000 000000 0001 1234789999999975

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=91.29  E-value=1.5  Score=38.46  Aligned_cols=65  Identities=20%  Similarity=0.256  Sum_probs=37.6

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      .| +|++|...+......| ..|+.++++.++..+.+.++..   +|..+.+.+    .+   ..+.+|++|.+.|.
T Consensus       185 ~G-~G~vG~~avq~Ak~~G-a~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v----~~---~~~~~D~vid~~G~  252 (375)
T PLN02178        185 NG-LGGLGHIAVKIGKAFG-LRVTVISRSSEKEREAIDRLGADSFLVTTDSQKM----KE---AVGTMDFIIDTVSA  252 (375)
T ss_pred             Ec-ccHHHHHHHHHHHHcC-CeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHH----HH---hhCCCcEEEECCCc
Confidence            44 5899999887666664 4677776665543333333321   233332222    11   12469999999885

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=91.15  E-value=0.69  Score=38.63  Aligned_cols=71  Identities=17%  Similarity=0.286  Sum_probs=43.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+++++|.++...+... +..|+.+.+++++.+.. ..+.-   ++....+....+.... . -.++|++|+++|.
T Consensus       145 v~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~d~~i~~~~~  218 (325)
T TIGR02824       145 IHGGASGIGTTAIQLAKAF-GARVFTTAGSDEKCAAC-EALGADIAINYREEDFVEVVKAET-G-GKGVDVILDIVGG  218 (325)
T ss_pred             EEcCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH-HHcCCcEEEecCchhHHHHHHHHc-C-CCCeEEEEECCch
Confidence            5789999999988877777 56777888877665543 33321   2333333333333222 1 1259999999873

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=91.04  E-value=1.3  Score=36.90  Aligned_cols=71  Identities=23%  Similarity=0.229  Sum_probs=42.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+++++|.+++..+... +..|+.+.++.++.+... .+..   .+....+..+.+. +... -..+|.++++.|.
T Consensus       145 i~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~i~-~~~~-~~~~d~v~~~~g~  218 (323)
T cd08241         145 VLGAAGGVGLAAVQLAKAL-GARVIAAASSEEKLALAR-ALGADHVIDYRDPDLRERVK-ALTG-GRGVDVVYDPVGG  218 (323)
T ss_pred             EEcCCchHHHHHHHHHHHh-CCEEEEEeCCHHHHHHHH-HcCCceeeecCCccHHHHHH-HHcC-CCCcEEEEECccH
Confidence            5788999999998888777 456777777766555442 2211   2222222222222 2211 1259999998874

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=90.98  E-value=1.9  Score=38.41  Aligned_cols=83  Identities=14%  Similarity=0.130  Sum_probs=54.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |.|.||+.++..+...|. .|+++++++.+++.....  .+++.+.+   +.+       ...|++|.+.|..       
T Consensus       209 G~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~--G~~~~~~~---e~v-------~~aDVVI~atG~~-------  268 (413)
T cd00401         209 GYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAME--GYEVMTME---EAV-------KEGDIFVTTTGNK-------  268 (413)
T ss_pred             CCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhc--CCEEccHH---HHH-------cCCCEEEECCCCH-------
Confidence            567999999999998865 788888888876655432  23333321   222       2579999887742       


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                       -.+.+..+..|++++.+++++..
T Consensus       269 -----------------~~i~~~~l~~mk~GgilvnvG~~  291 (413)
T cd00401         269 -----------------DIITGEHFEQMKDGAIVCNIGHF  291 (413)
T ss_pred             -----------------HHHHHHHHhcCCCCcEEEEeCCC
Confidence                             11223345677888999999843

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=90.97  E-value=0.74  Score=32.77  Aligned_cols=64  Identities=20%  Similarity=0.116  Sum_probs=47.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |.+.+|..+++.|.+. +..|+++.++++..+...+....   +|.++++.++++--      .+.+.+|...+
T Consensus         5 G~g~~~~~i~~~L~~~-~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i------~~a~~vv~~~~   71 (116)
T PF02254_consen    5 GYGRIGREIAEQLKEG-GIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGI------EKADAVVILTD   71 (116)
T ss_dssp             S-SHHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTG------GCESEEEEESS
T ss_pred             cCCHHHHHHHHHHHhC-CCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCc------cccCEEEEccC
Confidence            3467999999999995 67899999999887776655433   89999988877622      36777776555

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=90.95  E-value=1.6  Score=36.75  Aligned_cols=69  Identities=20%  Similarity=0.092  Sum_probs=42.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+++++|.+++...... +..|+.+.+++++.+... ++.-   .|..+. . .+.+.+..  -+.+|+++.+.|.
T Consensus       152 I~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~-~~~~~~~~--~~~~d~vld~~g~  223 (326)
T cd08289         152 VTGATGGVGSLAVSILAKL-GYEVVASTGKADAADYLK-KLGAKEVIPREEL-Q-EESIKPLE--KQRWAGAVDPVGG  223 (326)
T ss_pred             EEcCCchHHHHHHHHHHHC-CCeEEEEecCHHHHHHHH-HcCCCEEEcchhH-H-HHHHHhhc--cCCcCEEEECCcH
Confidence            5788999999988777667 557788888877665552 3321   232222 2 22222221  2368999988764

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=90.95  E-value=1.3  Score=37.38  Aligned_cols=94  Identities=18%  Similarity=0.158  Sum_probs=55.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.|+++++|.+++...... +..|+.+.+++++.+.. ..+..   .+..+ ....+.+.....  ..+|+++++.|.. 
T Consensus       145 I~ga~g~ig~~~~~~a~~~-g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~-~~~~~~~~~~~~--~~vd~v~~~~g~~-  218 (329)
T cd08250         145 VTAAAGGTGQFAVQLAKLA-GCHVIGTCSSDEKAEFL-KSLGCDRPINYKT-EDLGEVLKKEYP--KGVDVVYESVGGE-  218 (329)
T ss_pred             EEeCccHHHHHHHHHHHHc-CCeEEEEeCcHHHHHHH-HHcCCceEEeCCC-ccHHHHHHHhcC--CCCeEEEECCcHH-
Confidence            5789999999887766666 55677777776665544 33321   23222 223333333322  3699999887741 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               .....+..++..|++|.++...+
T Consensus       219 -------------------------~~~~~~~~l~~~g~~v~~g~~~~  241 (329)
T cd08250         219 -------------------------MFDTCVDNLALKGRLIVIGFISG  241 (329)
T ss_pred             -------------------------HHHHHHHHhccCCeEEEEecccC
Confidence                                     11222334577889998876543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=90.91  E-value=1.3  Score=35.98  Aligned_cols=29  Identities=21%  Similarity=0.155  Sum_probs=25.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDAS   32 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~   32 (230)
                      |.||+|.++++.|+..|...+.+.+.+.-
T Consensus        28 G~GglGs~va~~La~~Gvg~i~lvD~D~v   56 (228)
T cd00757          28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVV   56 (228)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEE
Confidence            67999999999999998889888876543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=90.82  E-value=0.77  Score=38.40  Aligned_cols=71  Identities=15%  Similarity=0.249  Sum_probs=43.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+++++|.++...+... +..++.+.++.++.+... .+..   .|.......+.+.. ... ...+|+++++.|.
T Consensus       150 i~g~~~~~g~~~~~~~~~~-g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~-~~~-~~~~d~vi~~~~~  223 (328)
T cd08268         150 ITAASSSVGLAAIQIANAA-GATVIATTRTSEKRDALL-ALGAAHVIVTDEEDLVAEVLR-ITG-GKGVDVVFDPVGG  223 (328)
T ss_pred             EecCccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHH-HcCCCEEEecCCccHHHHHHH-HhC-CCCceEEEECCch
Confidence            6799999999999988888 557777777776655442 2211   23222222222222 211 1269999998884

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=90.79  E-value=0.79  Score=39.07  Aligned_cols=61  Identities=15%  Similarity=0.201  Sum_probs=46.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcch-hHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASR-GQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~-~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      |||-+|++++.++-+. +..|+.++|.... .-..+..-.-+|..|.+.++.++++-     ++|.+|
T Consensus        19 GSGELGKEvaIe~QRL-G~eViAVDrY~~APAmqVAhrs~Vi~MlD~~al~avv~re-----kPd~IV   80 (394)
T COG0027          19 GSGELGKEVAIEAQRL-GVEVIAVDRYANAPAMQVAHRSYVIDMLDGDALRAVVERE-----KPDYIV   80 (394)
T ss_pred             cCCccchHHHHHHHhc-CCEEEEecCcCCChhhhhhhheeeeeccCHHHHHHHHHhh-----CCCeee
Confidence            6889999999999999 6688888886653 33333332338999999999999875     677766

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=90.77  E-value=1.6  Score=37.18  Aligned_cols=71  Identities=18%  Similarity=0.212  Sum_probs=43.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+++++|.+++..+... +..|+.+.+++++.+.. ..+..   ++..+.+..+.+.+.. . -..+|+++++.+.
T Consensus       171 V~g~~~~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~-~-~~~vd~vl~~~~~  244 (341)
T cd08297         171 ISGAGGGLGHLGVQYAKAM-GLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELT-G-GGGAHAVVVTAVS  244 (341)
T ss_pred             EECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHh-c-CCCCCEEEEcCCc
Confidence            5688889999988877777 55788888887766544 33321   2333333223332221 1 1369999986664

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=90.22  E-value=1.7  Score=37.64  Aligned_cols=28  Identities=18%  Similarity=0.256  Sum_probs=24.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDA   31 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~   31 (230)
                      |.||+|..+++.|+..|...+.+++++.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         31 GAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            5689999999999999877888888864

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=90.21  E-value=2  Score=35.58  Aligned_cols=71  Identities=15%  Similarity=0.229  Sum_probs=41.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+++++|.+++...... +..|+.+.+++++.+.. ..+..   .+..+.+..+.+ .+... -..+|.++++.|.
T Consensus       142 I~g~~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~-~~~~~-~~~~d~vl~~~~~  215 (320)
T cd05286         142 VHAAAGGVGLLLTQWAKAL-GATVIGTVSSEEKAELA-RAAGADHVINYRDEDFVERV-REITG-GRGVDVVYDGVGK  215 (320)
T ss_pred             EEcCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHH-HHCCCCEEEeCCchhHHHHH-HHHcC-CCCeeEEEECCCc
Confidence            5688999999988877776 55677777777665544 22221   122222222222 22211 1269999998774

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=90.15  E-value=2.1  Score=36.73  Aligned_cols=71  Identities=20%  Similarity=0.217  Sum_probs=41.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| ++++|..++......|...|+.+++++++.+.. +.+..   .|..+.+..+.+. ++.. -.++|+++.+.|.
T Consensus       172 I~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~i~-~~~~-~~~~d~vld~~g~  245 (351)
T cd08285         172 VFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELA-KEYGATDIVDYKNGDVVEQIL-KLTG-GKGVDAVIIAGGG  245 (351)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCceEecCCCCCHHHHHH-HHhC-CCCCcEEEECCCC
Confidence            454 589999988766666555688888877665433 22321   3443333223222 2211 1269999998885

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=90.14  E-value=1.3  Score=33.06  Aligned_cols=68  Identities=22%  Similarity=0.167  Sum_probs=42.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.||+|.++++.|+..|...+.+.+.+.-...+....+.  .-|+- ..-++.+.+.+.+..+.+++-.+.
T Consensus         6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG-~~Ka~~~~~~l~~~~p~v~i~~~~   75 (143)
T cd01483           6 GLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIG-KPKAEVAARRLNELNPGVNVTAVP   75 (143)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCC-ChHHHHHHHHHHHHCCCcEEEEEe
Confidence            459999999999999988889888877554444433221  12332 233455555665555555554443

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=90.05  E-value=1.5  Score=38.01  Aligned_cols=31  Identities=16%  Similarity=0.149  Sum_probs=26.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchh
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRG   34 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~   34 (230)
                      |.||+|..+++.|+..|...|.+++.+.-..
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~   61 (339)
T PRK07688         31 GAGALGTANAEMLVRAGVGKVTIVDRDYVEW   61 (339)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCccCH
Confidence            5689999999999999888999998875433

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=90.03  E-value=8.4  Score=32.72  Aligned_cols=32  Identities=19%  Similarity=0.297  Sum_probs=28.4

Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994          44 LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus        44 ~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      .|..+.+--+..++.|.+.+|++|.+|++-..
T Consensus       110 gDaFS~e~k~kvIe~Ik~~~g~vDlvvYSlAs  141 (398)
T COG3007         110 GDAFSDEMKQKVIEAIKQDFGKVDLVVYSLAS  141 (398)
T ss_pred             cchhhHHHHHHHHHHHHHhhccccEEEEeccC
Confidence            69988888899999999999999999987664

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=90.03  E-value=2.4  Score=36.81  Aligned_cols=70  Identities=20%  Similarity=0.214  Sum_probs=41.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| ++++|..+.......|...|+.+++++.+.+.. +++..   ++..+.+..+. +.+..  -.++|+++++.|.
T Consensus       192 I~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~-~~~g~~~~i~~~~~~~~~~-v~~~~--~~~~d~vld~~g~  264 (365)
T cd08278         192 VFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA-KELGATHVINPKEEDLVAA-IREIT--GGGVDYALDTTGV  264 (365)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCcEEecCCCcCHHHH-HHHHh--CCCCcEEEECCCC
Confidence            455 589999877766666555788888877665533 33221   23333222223 33332  2369999999885

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=89.97  E-value=2.1  Score=38.13  Aligned_cols=69  Identities=6%  Similarity=-0.001  Sum_probs=45.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhh--------cCCCcEEEEccCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAE--------HGGVDVLVNNAAI   75 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~--------~~~id~lv~~ag~   75 (230)
                      |.|-+|..+|..|+++ ++.|+..++++++.+......  .++. +..+++++.+..+.        ...-|++|.|...
T Consensus        10 GlG~~G~~~A~~La~~-G~~V~~~D~~~~~v~~l~~g~--~~~~-e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~vpt   85 (415)
T PRK11064         10 GLGYIGLPTAAAFASR-QKQVIGVDINQHAVDTINRGE--IHIV-EPDLDMVVKTAVEGGYLRATTTPEPADAFLIAVPT   85 (415)
T ss_pred             CcchhhHHHHHHHHhC-CCEEEEEeCCHHHHHHHHCCC--CCcC-CCCHHHHHHHHhhcCceeeecccccCCEEEEEcCC
Confidence            4578999999999999 578999999998877643222  3333 33444554433211        1246888888876


Q ss_pred             c
Q psy7994          76 A   76 (230)
Q Consensus        76 ~   76 (230)
                      .
T Consensus        86 p   86 (415)
T PRK11064         86 P   86 (415)
T ss_pred             C
Confidence            4

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=89.91  E-value=1.2  Score=34.66  Aligned_cols=68  Identities=19%  Similarity=0.128  Sum_probs=41.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-hcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-QKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.||+|..+++.|+..|...+.+.+.+.-...+....+ ..-|+... -.+.+.+.+.+..+.+++-.++
T Consensus         6 G~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~-Ka~~~~~~l~~lnp~v~i~~~~   74 (174)
T cd01487           6 GAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEP-KVEALKENLREINPFVKIEAIN   74 (174)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCCh-HHHHHHHHHHHHCCCCEEEEEE
Confidence            56999999999999998888999988763333222111 11244322 2445555555555556654443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=89.88  E-value=2  Score=37.66  Aligned_cols=36  Identities=11%  Similarity=0.100  Sum_probs=26.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA   37 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~   37 (230)
                      |+|+++++|.+++...... +..++.+.+++++.+..
T Consensus       199 V~ga~g~iG~a~~~lak~~-G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         199 IWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYC  234 (393)
T ss_pred             EECCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHH
Confidence            5788999999988766666 55566677777666544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK14968 putative methyltransferase; Provisional

Probab=89.88  E-value=0.88  Score=35.20  Aligned_cols=107  Identities=11%  Similarity=0.011  Sum_probs=52.9

Q ss_pred             HHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCH--HH-HHHHHHHHHhhcCCCcEEEEccCCccccCCCCCChhH
Q psy7994          12 IVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDK--NS-IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQ   88 (230)
Q Consensus        12 ~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~--~~-v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~   88 (230)
                      ++..++++ +..|+.+++++..++...+.+....+.+.  .- ...+.+.+.+  ..+|+++.|..+....+.... .+.
T Consensus        37 ~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~d~vi~n~p~~~~~~~~~~-~~~  112 (188)
T PRK14968         37 VAIVAAKN-GKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPFRG--DKFDVILFNPPYLPTEEEEEW-DDW  112 (188)
T ss_pred             HHHHHHhh-cceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccccc--cCceEEEECCCcCCCCchhhh-hhh
Confidence            44445555 56888889888776665544432111110  00 0001111111  269999988876432211111 112


Q ss_pred             HHHHHHHhhhh---HHHHHHHhcccccCCceEEEecC
Q psy7994          89 ALHTMRTNYFA---LIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        89 ~~~~~~~n~~g---~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      +...+.....+   .-.+++.+.+.|+++|.++++.+
T Consensus       113 ~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~~~~  149 (188)
T PRK14968        113 LNYALSGGKDGREVIDRFLDEVGRYLKPGGRILLLQS  149 (188)
T ss_pred             hhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence            22222222222   22356777778888888776654

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=89.88  E-value=3.5  Score=33.95  Aligned_cols=32  Identities=25%  Similarity=0.135  Sum_probs=25.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ   35 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~   35 (230)
                      |-||+|.-.+..|++-|...+.+++-+.-...
T Consensus        37 GiGGVGSw~veALaRsGig~itlID~D~v~vT   68 (263)
T COG1179          37 GIGGVGSWAVEALARSGIGRITLIDMDDVCVT   68 (263)
T ss_pred             ecCchhHHHHHHHHHcCCCeEEEEeccccccc
Confidence            45899999999999999889888877654333

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=89.85  E-value=1.6  Score=29.86  Aligned_cols=39  Identities=13%  Similarity=0.295  Sum_probs=31.9

Q ss_pred             CCCcHHHHHHHHHHHhc--CCeEE-EEecCcchhHHHHHhhh
Q psy7994           4 ANKGIGYGIVKGLIQQF--DGIIY-LTARDASRGQEALEKLQ   42 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g--~~~vi-~~~r~~~~~~~~~~~~~   42 (230)
                      |+|-+|.++++.|.+.|  ...|+ .++|++++.++..+++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            67899999999999994  15666 45999999988877765

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=89.74  E-value=0.51  Score=38.09  Aligned_cols=37  Identities=27%  Similarity=0.405  Sum_probs=30.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL   38 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~   38 (230)
                      |.||+|.+|.+++..|++. ++.|++.+|++++.+...
T Consensus         5 IIGG~G~mG~ala~~L~~~-G~~V~v~~r~~~~~~~l~   41 (219)
T TIGR01915         5 VLGGTGDQGKGLALRLAKA-GNKIIIGSRDLEKAEEAA   41 (219)
T ss_pred             EEcCCCHHHHHHHHHHHhC-CCEEEEEEcCHHHHHHHH
Confidence            4688899999999999998 467788899887765543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=89.66  E-value=0.58  Score=39.25  Aligned_cols=61  Identities=20%  Similarity=0.156  Sum_probs=45.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+||-+++++..|++.|...|.+++|+.++.+...+.+. .+..  +.       .  .....|+|||+....
T Consensus       129 GaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~-~~~~--~~-------~--~~~~~dlvINaTp~G  189 (272)
T PRK12550        129 GSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG-YEWR--PD-------L--GGIEADILVNVTPIG  189 (272)
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC-Ccch--hh-------c--ccccCCEEEECCccc
Confidence            579999999999999988899999999988887766542 1111  11       1  113579999998764

>PRK08328 hypothetical protein; Provisional

Probab=89.66  E-value=1.7  Score=35.50  Aligned_cols=65  Identities=14%  Similarity=0.083  Sum_probs=40.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      |.||+|.++++.|+..|...+.+++.+.-...+...++.  .-|+-....++.+.+++.+..+.+.+
T Consensus        34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v  100 (231)
T PRK08328         34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKI  100 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEE
Confidence            678999999999999998899999887665555543332  12443322333344444444444443

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=89.64  E-value=2.4  Score=36.19  Aligned_cols=88  Identities=18%  Similarity=0.209  Sum_probs=51.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+++++|.+++......|. .|+.+.++ ++. ....++..   +|..+.+..+.+    .. .+.+|+++++.|.. 
T Consensus       168 I~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~l----~~-~~~vd~vi~~~g~~-  238 (350)
T cd08248         168 ILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAI-PLVKSLGADDVIDYNNEDFEEEL----TE-RGKFDVILDTVGGD-  238 (350)
T ss_pred             EECCCChHHHHHHHHHHHCCC-eEEEEeCc-chH-HHHHHhCCceEEECCChhHHHHH----Hh-cCCCCEEEECCChH-
Confidence            578899999999887777754 56665543 222 23233221   343333333322    22 25799999988741 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                                               ..+..++.+++.|++|.++.
T Consensus       239 -------------------------~~~~~~~~l~~~G~~v~~g~  258 (350)
T cd08248         239 -------------------------TEKWALKLLKKGGTYVTLVS  258 (350)
T ss_pred             -------------------------HHHHHHHHhccCCEEEEecC
Confidence                                     12223345578899998864

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=89.63  E-value=2.8  Score=36.12  Aligned_cols=72  Identities=17%  Similarity=0.186  Sum_probs=40.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHH--HHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKN--SIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~--~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+| ++++|.+++..+...|...|+.+.+++++.+.. ..+..   .|..+..  .....+.++.. -..+|+++++.|.
T Consensus       183 I~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~-~~~~d~vid~~g~  259 (361)
T cd08231         183 VQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGADATIDIDELPDPQRRAIVRDITG-GRGADVVIEASGH  259 (361)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCCeEEcCcccccHHHHHHHHHHhC-CCCCcEEEECCCC
Confidence            455 699999988766666443788887777665533 23321   2333221  11122222221 1269999999875

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=89.61  E-value=2.9  Score=37.44  Aligned_cols=59  Identities=14%  Similarity=0.095  Sum_probs=38.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|.||+.++..|...|. .|+++++++.+.......  .+++.+.   ++++       ...|++|.+.|.
T Consensus       219 G~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~--G~~v~~l---~eal-------~~aDVVI~aTG~  277 (425)
T PRK05476        219 GYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMD--GFRVMTM---EEAA-------ELGDIFVTATGN  277 (425)
T ss_pred             CCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhc--CCEecCH---HHHH-------hCCCEEEECCCC
Confidence            357999999999999955 788898888765443322  2333322   2222       268999887663

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=89.49  E-value=2.1  Score=35.69  Aligned_cols=71  Identities=18%  Similarity=0.146  Sum_probs=40.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+| ++++|.+++..+...|...|+.+.+++++.+ ....+.-   .+ ....+..+.+.++.. ..++|+++++.|.
T Consensus       135 I~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~-~~~~~g~~~~~~-~~~~~~~~~l~~~~~-~~~vd~vld~~g~  208 (312)
T cd08269         135 VIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLA-LARELGATEVVT-DDSEAIVERVRELTG-GAGADVVIEAVGH  208 (312)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHhCCceEec-CCCcCHHHHHHHHcC-CCCCCEEEECCCC
Confidence            455 6899999987777775443777877766555 2233221   11 112222222322222 1269999999875

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=89.31  E-value=2.2  Score=36.32  Aligned_cols=68  Identities=18%  Similarity=0.186  Sum_probs=39.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+| ++++|.+++..+...|...|+.+.+++++.+ ....+..   +|..+.. +    .+.....+++|+++.+.|.
T Consensus       171 I~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~-~~~~~g~~~vi~~~~~~-~----~~~~~~~~~vd~vld~~g~  241 (339)
T cd08232         171 VTG-AGPIGALVVAAARRAGAAEIVATDLADAPLA-VARAMGADETVNLARDP-L----AAYAADKGDFDVVFEASGA  241 (339)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHcCCCEEEcCCchh-h----hhhhccCCCccEEEECCCC
Confidence            444 6799999887666664447777777666555 3333321   3433322 2    2222222469999999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=89.30  E-value=0.71  Score=36.82  Aligned_cols=62  Identities=15%  Similarity=0.224  Sum_probs=39.8

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      .|. |.+|+.+++.|.+. +..|++.+++++.++...+.+. ...-+.   ++++.      .+.|+++.++..
T Consensus        34 ~G~-G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~g-~~~v~~---~~l~~------~~~Dv~vp~A~~   95 (200)
T cd01075          34 QGL-GKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELFG-ATVVAP---EEIYS------VDADVFAPCALG   95 (200)
T ss_pred             ECC-CHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcC-CEEEcc---hhhcc------ccCCEEEecccc
Confidence            454 58999999999999 5577788888777766655432 111111   12221      168999988753

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=89.25  E-value=2.7  Score=36.43  Aligned_cols=88  Identities=17%  Similarity=0.214  Sum_probs=50.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      |+|++|...+..+... +..++.+.+++++.+...+.+..   ++..+.+.+    .+.   .+.+|++|.+.|..    
T Consensus       188 G~G~vG~~av~~Ak~~-G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~----~~~---~~~~D~vid~~g~~----  255 (357)
T PLN02514        188 GLGGVGHMGVKIAKAM-GHHVTVISSSDKKREEALEHLGADDYLVSSDAAEM----QEA---ADSLDYIIDTVPVF----  255 (357)
T ss_pred             cccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHH----HHh---cCCCcEEEECCCch----
Confidence            4689999887765555 44667677766665555443322   222222222    221   23699999998842    


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                            .               ..+..+..+++.|+++.++...
T Consensus       256 ------~---------------~~~~~~~~l~~~G~iv~~G~~~  278 (357)
T PLN02514        256 ------H---------------PLEPYLSLLKLDGKLILMGVIN  278 (357)
T ss_pred             ------H---------------HHHHHHHHhccCCEEEEECCCC
Confidence                  0               1112233457889999887653

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=89.13  E-value=2.8  Score=35.90  Aligned_cols=70  Identities=11%  Similarity=0.196  Sum_probs=40.8

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      +|++++|.+++......|...++.+++++++.. ..+++..   +|....+..+++.+ .... ..+|+++++.|.
T Consensus       181 ~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~-~~~~-~~vdvvld~~g~  253 (350)
T cd08256         181 AGAGPLGLGMIGAARLKNPKKLIVLDLKDERLA-LARKFGADVVLNPPEVDVVEKIKE-LTGG-YGCDIYIEATGH  253 (350)
T ss_pred             ECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHH-HHHHcCCcEEecCCCcCHHHHHHH-HhCC-CCCCEEEECCCC
Confidence            677999999888777776666777777766554 3333321   23222222222222 2111 159999998874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=89.11  E-value=2.2  Score=36.46  Aligned_cols=72  Identities=18%  Similarity=0.151  Sum_probs=40.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhc--CCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEH--GGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~--~~id~lv~~ag~   75 (230)
                      |+| ++++|.+++..+...|...|+.+.+++++.+.. .++..   +|..+... ..+.+++....  .++|+++++.|.
T Consensus       168 I~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~  244 (343)
T cd05285         168 VFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KELGATHTVNVRTEDT-PESAEKIAELLGGKGPDVVIECTGA  244 (343)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEeccccccc-hhHHHHHHHHhCCCCCCEEEECCCC
Confidence            444 579999987766666554477777776665544 32321   34333221 00122222222  259999999885

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=89.10  E-value=0.93  Score=38.73  Aligned_cols=75  Identities=13%  Similarity=0.114  Sum_probs=47.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcc-cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKL-DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~-D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.|+ |.+|..+|..|+.++- ..+++.+.++++++....++..+ -+.....+.-.... .+.+..-|++|.+||...
T Consensus         4 IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-y~~~~~aDivvitaG~~~   80 (307)
T cd05290           4 VIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-YDDCADADIIVITAGPSI   80 (307)
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-HHHhCCCCEEEECCCCCC
Confidence            3565 9999999999998865 47999999988877766666541 11100000000011 123357999999999853

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=89.08  E-value=0.8  Score=40.94  Aligned_cols=37  Identities=19%  Similarity=0.375  Sum_probs=29.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE   39 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~   39 (230)
                      |.|+ |.+|.++++.|.++ +..|++++++++..+...+
T Consensus         5 IiG~-G~ig~~~a~~L~~~-g~~v~vid~~~~~~~~~~~   41 (453)
T PRK09496          5 IVGA-GQVGYTLAENLSGE-NNDVTVIDTDEERLRRLQD   41 (453)
T ss_pred             EECC-CHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHh
Confidence            3555 99999999999998 5677888898887776544

>PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=89.04  E-value=8.2  Score=31.37  Aligned_cols=128  Identities=15%  Similarity=0.050  Sum_probs=77.5

Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc---c----------C---------------------CCCCChhHH
Q psy7994          44 LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK---V----------N---------------------SSEPFGSQA   89 (230)
Q Consensus        44 ~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~---~----------~---------------------~~~~~~~~~   89 (230)
                      .|..+.+.-++.++.|.+.||+||.||++-.....   .          +                     +.-.+++++
T Consensus        30 gDAFS~e~K~~vI~~Ik~~~G~vDLvVYSLAsp~R~~P~tG~~~~S~LKpig~~~t~~tld~~~~~~~~~tiepAt~eEi  109 (237)
T PF12241_consen   30 GDAFSDEMKEQVIELIKEDFGKVDLVVYSLASPRRTDPDTGETYRSVLKPIGEPYTGKTLDTETDEVSEVTIEPATEEEI  109 (237)
T ss_dssp             S-TTSHHHHHHHHHHHHHHTS-EEEEEE----SEEE-TTT--EEE----BSSS-EEEEEEETTTTEEEEEEE----HHHH
T ss_pred             cccCCHHHHHHHHHHHHHhcCCccEEEEeccCCCCCCCCCCCEEeeeeccCCCccccceeecCCCeEEEEeeCCCCHHHH
Confidence            79999999999999999999999999988665311   0          0                     011244777


Q ss_pred             HHHHHHhhhhHHH-HHHHhcc--cccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCc
Q psy7994          90 LHTMRTNYFALID-VCDILFP--LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT  166 (230)
Q Consensus        90 ~~~~~~n~~g~~~-l~~~~~~--~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (230)
                      +.++.|.=---|. .++++..  .|.++.+-|..|-++...                                      .
T Consensus       110 ~~TvkVMGGEDWe~Wi~aL~~AgvLA~g~kTvAySYIG~~~--------------------------------------T  151 (237)
T PF12241_consen  110 ENTVKVMGGEDWELWIDALKEAGVLAEGFKTVAYSYIGPEL--------------------------------------T  151 (237)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHCT-EEEEEEEEEEEE---GG--------------------------------------G
T ss_pred             HhhccccCchHHHHHHHHHHHCCCccCCCEEEEEeccCccc--------------------------------------C
Confidence            7777776665544 3344432  344555667776655422                                      2


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc
Q psy7994         167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV  212 (230)
Q Consensus       167 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v  212 (230)
                      .+-.....-|.+|.=++.-++.+...|...+   |-...+|++..|
T Consensus       152 ~pIY~~GTiG~AK~dLe~ta~~i~~~L~~~~---G~A~vsV~KAlV  194 (237)
T PF12241_consen  152 WPIYRDGTIGKAKEDLEKTAHAINEKLAAIG---GKAYVSVNKALV  194 (237)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHHHHHHTTT----EEEEEEE----
T ss_pred             hhhhcCCcHHHHHHHHHHHHHHHHHHHHhcC---CcEEEEEehhhh
Confidence            3444557889999999999999999998752   344666776654

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=88.88  E-value=3.2  Score=35.38  Aligned_cols=67  Identities=21%  Similarity=0.272  Sum_probs=40.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| ++++|.+++..+... +..|+.+.+++++.+.. .++..   .+....+ ..+.+.+.    +.+|+++.+.|.
T Consensus       169 V~g-~g~iG~~~~~~a~~~-G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~-~~~~~~~~----~~~d~vi~~~g~  238 (333)
T cd08296         169 VQG-IGGLGHLAVQYAAKM-GFRTVAISRGSDKADLA-RKLGAHHYIDTSKED-VAEALQEL----GGAKLILATAPN  238 (333)
T ss_pred             EEC-CcHHHHHHHHHHHHC-CCeEEEEeCChHHHHHH-HHcCCcEEecCCCcc-HHHHHHhc----CCCCEEEECCCc
Confidence            467 799999887766666 55788888877766554 33321   2322222 22222222    468999987663

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=88.86  E-value=1.1  Score=38.06  Aligned_cols=73  Identities=21%  Similarity=0.218  Sum_probs=42.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc-cCCCH-HHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-DILDK-NSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~-D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|+ |.+|..++..|+.++...|++.+++++.+.....++... +.... ..+... .. .+.+..-|++|.++|..
T Consensus         3 IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t-~d-~~~l~dADiVIit~g~p   77 (300)
T cd01339           3 IIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGT-ND-YEDIAGSDVVVITAGIP   77 (300)
T ss_pred             EECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEc-CC-HHHhCCCCEEEEecCCC
Confidence            4576 889999999999875338999999877554332222210 00000 000000 00 11234789999999974

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=88.81  E-value=0.99  Score=40.89  Aligned_cols=68  Identities=13%  Similarity=0.155  Sum_probs=41.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      .||-+|++||+.++.+|+.+.++.+...-...   ..   ..+-..++.+++.+.+.+.++ .|++|++|.+...
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~p---~~---v~~i~V~ta~eM~~av~~~~~-~Di~I~aAAVaDy  347 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVDLADP---QG---VKVIHVESARQMLAAVEAALP-ADIAIFAAAVADW  347 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcCCCCC---CC---ceEEEecCHHHHHHHHHhhCC-CCEEEEeccccce
Confidence            46778999999999996655555443221111   11   222233445555555555554 6999999999753

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=88.53  E-value=2.8  Score=34.96  Aligned_cols=69  Identities=19%  Similarity=0.238  Sum_probs=41.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+++++|.++....... +..|+.+.+++++.+.. .++.-  +..... +....+.+.   -.++|+++++.|.
T Consensus       148 V~ga~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~-~~~~~i~~~---~~~~d~vl~~~~~  218 (320)
T cd08243         148 IRGGTSSVGLAALKLAKAL-GATVTATTRSPERAALL-KELGADEVVIDDG-AIAEQLRAA---PGGFDKVLELVGT  218 (320)
T ss_pred             EEcCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH-HhcCCcEEEecCc-cHHHHHHHh---CCCceEEEECCCh
Confidence            5789999999987766666 55677777777665544 22211  111121 222222222   2379999998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=88.50  E-value=2.4  Score=37.04  Aligned_cols=28  Identities=21%  Similarity=0.166  Sum_probs=25.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDA   31 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~   31 (230)
                      |.||+|..+++.|+..|...+.+++.+.
T Consensus        35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         35 GAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            5699999999999999988999988775

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=88.48  E-value=0.43  Score=34.66  Aligned_cols=66  Identities=21%  Similarity=0.236  Sum_probs=38.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCe-EEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~-vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      |.|++|.+|..+.+.|.++-... +.+.++..+..........      +..+.+ ...+.        +..+|++|.|.
T Consensus         4 IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~Dvvf~a~   74 (121)
T PF01118_consen    4 IVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPEE--------LSDVDVVFLAL   74 (121)
T ss_dssp             EESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGHH--------HTTESEEEE-S
T ss_pred             EECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchhH--------hhcCCEEEecC
Confidence            67999999999999999975554 4445555533333333222      122222 11111        14899999887


Q ss_pred             CC
Q psy7994          74 AI   75 (230)
Q Consensus        74 g~   75 (230)
                      +-
T Consensus        75 ~~   76 (121)
T PF01118_consen   75 PH   76 (121)
T ss_dssp             CH
T ss_pred             ch
Confidence            65

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=88.46  E-value=3.4  Score=36.18  Aligned_cols=119  Identities=14%  Similarity=0.079  Sum_probs=59.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |.| ++++|..++..+...|...|+.+++++++.+...+...  -++..+.++....+.++.. -..+|+++.+.|.-..
T Consensus       190 V~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~-~~~~D~vld~vg~~~~  267 (386)
T cd08283         190 VWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRELTG-GRGPDVCIDAVGMEAH  267 (386)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHcC-CCCCCEEEECCCCccc
Confidence            344 58899998777666654468888888777665544311  1233332222222222211 1269999999874210


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      .....    .+..-.=++.......++.+++.++++|++|.++....
T Consensus       268 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~  310 (386)
T cd08283         268 GSPLH----KAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGG  310 (386)
T ss_pred             ccccc----cccccccccccCchHHHHHHHHHhccCCEEEEEcCCCC
Confidence            00000    00000000000111233444556688899999975443

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>PLN02494 adenosylhomocysteinase

Probab=88.29  E-value=3.2  Score=37.60  Aligned_cols=84  Identities=13%  Similarity=0.131  Sum_probs=53.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |.|.||+.+++.+...| ..|+++.+++.+.......  .+++.+   +++++.       ..|++|.+.|...      
T Consensus       261 GyG~IGr~vA~~aka~G-a~VIV~e~dp~r~~eA~~~--G~~vv~---leEal~-------~ADVVI~tTGt~~------  321 (477)
T PLN02494        261 GYGDVGKGCAAAMKAAG-ARVIVTEIDPICALQALME--GYQVLT---LEDVVS-------EADIFVTTTGNKD------  321 (477)
T ss_pred             CCCHHHHHHHHHHHHCC-CEEEEEeCCchhhHHHHhc--CCeecc---HHHHHh-------hCCEEEECCCCcc------
Confidence            45799999999998884 4788888887664433222  122222   223332       5799998766421      


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                        .+.+..+..|++++.+++++...
T Consensus       322 ------------------vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        322 ------------------IIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             ------------------chHHHHHhcCCCCCEEEEcCCCC
Confidence                              01234455678889999997643

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=88.28  E-value=3.1  Score=36.57  Aligned_cols=36  Identities=14%  Similarity=0.108  Sum_probs=25.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA   37 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~   37 (230)
                      |+|+++++|.+++..+... +..++.+.++.++.+..
T Consensus       195 V~Ga~g~vG~~ai~~ak~~-G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       195 IWGAAGGLGSYATQLARAG-GGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             EEcCCcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHH
Confidence            5789999999988766666 45556666666555433

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=88.10  E-value=2.7  Score=35.64  Aligned_cols=36  Identities=14%  Similarity=0.161  Sum_probs=25.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA   37 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~   37 (230)
                      |+| ++++|.+++.......+..|+.+.+++++.+..
T Consensus       168 V~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~  203 (338)
T PRK09422        168 IYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALA  203 (338)
T ss_pred             EEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHH
Confidence            567 689999987755543255788888888776655

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=88.03  E-value=3.2  Score=37.63  Aligned_cols=65  Identities=12%  Similarity=0.090  Sum_probs=41.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc-cCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-DILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~-D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      |.|-+|.++++.|+++ ++.|++.+|++++.+...+..... .+....+.+.+++.    ..+.|+||.+.
T Consensus         6 GLG~MG~~mA~nL~~~-G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~----l~~~dvIil~v   71 (467)
T TIGR00873         6 GLAVMGSNLALNMADH-GFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQS----LERPRKIMLMV   71 (467)
T ss_pred             eeHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhh----cCCCCEEEEEC
Confidence            4577999999999999 568889999999887766541111 12222233444433    23567666654

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=87.98  E-value=1.1  Score=38.47  Aligned_cols=65  Identities=15%  Similarity=0.150  Sum_probs=47.1

Q ss_pred             CCCcHHHHHHHHHHH-hcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           4 ANKGIGYGIVKGLIQ-QFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         4 ~s~giG~~~a~~la~-~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+.|+..++.|+. ++...|.+.+|+.++.+...+++.+   +++...+++++.+.       ..|+||++...
T Consensus       136 GaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~-------~aDiVvtaT~s  204 (326)
T TIGR02992       136 GAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMS-------GADIIVTTTPS  204 (326)
T ss_pred             CCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhc-------cCCEEEEecCC
Confidence            578999999999974 5457899999999999888777643   33332334444443       68999988765

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK08618 ornithine cyclodeaminase; Validated

Probab=87.84  E-value=1.3  Score=38.17  Aligned_cols=66  Identities=14%  Similarity=0.154  Sum_probs=45.7

Q ss_pred             CCCcHHHHHHHHHHH-hcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQ-QFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~-~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|++|+..+..++. ++...|.+.+|++++.++..+++..   +++...++.++++       ...|+||++....
T Consensus       134 GaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-------~~aDiVi~aT~s~  203 (325)
T PRK08618        134 GTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAI-------EEADIIVTVTNAK  203 (325)
T ss_pred             CCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHH-------hcCCEEEEccCCC
Confidence            678899888877764 4567999999999998888776643   2322233334444       2689999888753

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=87.72  E-value=1.9  Score=36.36  Aligned_cols=37  Identities=8%  Similarity=0.104  Sum_probs=30.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL   41 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~   41 (230)
                      |+|-+|..+|..|+.. +..|++.+++++.++...+.+
T Consensus        12 GaG~mG~~iA~~~a~~-G~~V~l~d~~~~~~~~~~~~i   48 (286)
T PRK07819         12 GAGQMGAGIAEVCARA-GVDVLVFETTEELATAGRNRI   48 (286)
T ss_pred             cccHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHH
Confidence            4578999999999998 679999999998877654443

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=87.66  E-value=1.7  Score=34.61  Aligned_cols=33  Identities=21%  Similarity=0.196  Sum_probs=27.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecC---cchhHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARD---ASRGQE   36 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~---~~~~~~   36 (230)
                      |.||+|..++..|+..|...+++.+++   .+.+..
T Consensus        28 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~R   63 (200)
T TIGR02354        28 GLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNR   63 (200)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCEEccccccc
Confidence            568999999999999987789999988   444443

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=87.63  E-value=2  Score=36.67  Aligned_cols=113  Identities=12%  Similarity=0.020  Sum_probs=60.4

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccC-CC-HHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDI-LD-KNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~-s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      .| +|-+|..+|..|+.+|...|++.++.++..+.....+..... .. ...+. ....+. ....-|++|.++|.... 
T Consensus         7 IG-aG~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~-~t~d~~-~~~~aDiVIitag~p~~-   82 (305)
T TIGR01763         7 IG-AGFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVT-GTNNYA-DTANSDIVVITAGLPRK-   82 (305)
T ss_pred             EC-cCHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEE-ecCCHH-HhCCCCEEEEcCCCCCC-
Confidence            45 488999999999998644688888876644422222211000 00 00000 001111 13478999999997532 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      +  +.   .-.+.+..|..=...+++.+.+.. +++.||++|...
T Consensus        83 ~--~~---sR~~l~~~N~~iv~~i~~~I~~~~-p~~~iIv~tNP~  121 (305)
T TIGR01763        83 P--GM---SREDLLSMNAGIVREVTGRIMEHS-PNPIIVVVSNPL  121 (305)
T ss_pred             c--CC---CHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcH
Confidence            1  11   122355566665666666555442 446666666433

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=87.61  E-value=1  Score=35.26  Aligned_cols=39  Identities=15%  Similarity=0.209  Sum_probs=31.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK   43 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~   43 (230)
                      |+|-+|..+|..++.. +..|.+.+++++.++...+.+..
T Consensus         6 GaG~mG~~iA~~~a~~-G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    6 GAGTMGRGIAALFARA-GYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             S-SHHHHHHHHHHHHT-TSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHhC-CCcEEEEECChHHHHhhhhHHHH
Confidence            4589999999999999 78999999999888776665543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=87.45  E-value=2.9  Score=36.74  Aligned_cols=29  Identities=24%  Similarity=0.300  Sum_probs=25.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDAS   32 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~   32 (230)
                      |.||+|..+++.|+..|...+.+++.+.-
T Consensus        48 G~GglG~~v~~~La~~Gvg~i~ivD~D~v   76 (370)
T PRK05600         48 GAGGLGCPAMQSLASAGVGTITLIDDDTV   76 (370)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEeCCEE
Confidence            67899999999999998889988887743

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=87.28  E-value=2.7  Score=31.96  Aligned_cols=35  Identities=20%  Similarity=0.152  Sum_probs=28.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE   39 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~   39 (230)
                      |+|-.|.++|..|+++ ++.|.+.+|+++..+...+
T Consensus         6 GaG~~G~AlA~~la~~-g~~V~l~~~~~~~~~~i~~   40 (157)
T PF01210_consen    6 GAGNWGTALAALLADN-GHEVTLWGRDEEQIEEINE   40 (157)
T ss_dssp             SSSHHHHHHHHHHHHC-TEEEEEETSCHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHc-CCEEEEEeccHHHHHHHHH
Confidence            5678899999999999 6899999999866665543

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=87.23  E-value=1.7  Score=32.05  Aligned_cols=70  Identities=21%  Similarity=0.233  Sum_probs=43.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh--hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL--QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~--~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |.||+|..+++.|+..|...+.+.+.+.=...+....+  ...|+- ..-.+.+.+.+.+..+.+++..+...
T Consensus         9 G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG-~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    9 GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVG-KNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTT-SBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccch-hHHHHHHHHHHHHhcCceeeeeeecc
Confidence            67999999999999998889999888755444333321  113442 23445555555555666665544433

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=87.11  E-value=2.5  Score=34.41  Aligned_cols=27  Identities=15%  Similarity=0.117  Sum_probs=24.5

Q ss_pred             CCCcHHHHHHHHHHHhcCC--eEEEEecC
Q psy7994           4 ANKGIGYGIVKGLIQQFDG--IIYLTARD   30 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~--~vi~~~r~   30 (230)
                      |+|+.|.+++..|.+.|..  .|.+++|+
T Consensus        32 GAGgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          32 GAGAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CchHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4599999999999999877  89999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=87.10  E-value=3.6  Score=35.22  Aligned_cols=85  Identities=13%  Similarity=0.116  Sum_probs=51.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |-|.||+.+++.|... +..|+..++.......    +.  .....+++++++.       .-|+|+.+.....      
T Consensus       143 G~G~IG~~vA~~l~af-G~~V~~~~~~~~~~~~----~~--~~~~~~~l~e~l~-------~aDvvv~~lPlt~------  202 (312)
T PRK15469        143 GAGVLGSKVAQSLQTW-GFPLRCWSRSRKSWPG----VQ--SFAGREELSAFLS-------QTRVLINLLPNTP------  202 (312)
T ss_pred             CCCHHHHHHHHHHHHC-CCEEEEEeCCCCCCCC----ce--eecccccHHHHHh-------cCCEEEECCCCCH------
Confidence            5688999999999988 5577777776543211    11  1112344555554       6799988777531      


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                         + -..+          +-+..+..|+++..+||++=
T Consensus       203 ---~-T~~l----------i~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        203 ---E-TVGI----------INQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             ---H-HHHH----------hHHHHHhcCCCCcEEEECCC
Confidence               1 1111          12445666788888888873

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=87.06  E-value=4.6  Score=34.15  Aligned_cols=69  Identities=17%  Similarity=0.191  Sum_probs=40.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| ++++|.+++..+...|...|+++.+++++.+.. .++..   ++..+.+...+  ..  ....++|+++++.|.
T Consensus       165 I~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~--~~--~~~~~vd~v~~~~~~  236 (334)
T cd08234         165 VFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA-KKLGATETVDPSREDPEAQ--KE--DNPYGFDVVIEATGV  236 (334)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCeEEecCCCCCHHHH--HH--hcCCCCcEEEECCCC
Confidence            355 589999988877777544577787777665544 22211   23332222222  11  112479999998774

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=86.99  E-value=2.8  Score=36.28  Aligned_cols=72  Identities=13%  Similarity=0.167  Sum_probs=53.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcC-CCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHG-GVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~-~id~lv~~ag~~   76 (230)
                      |-||+|.+...-....|...|+.++.++++++... ++-.-|.-++.+...+++.+.+..+ ..|+.|.+.|..
T Consensus       193 GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~  265 (366)
T COG1062         193 GLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNV  265 (366)
T ss_pred             eccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCH
Confidence            45899999999999998889999999999887553 3433455555544456666666665 899999999963

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=86.82  E-value=2.3  Score=35.44  Aligned_cols=87  Identities=26%  Similarity=0.272  Sum_probs=52.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      |+|+++++|.+++......| ..|+.+.+++++.+...+ +..-++.....      ++..  +.+|+++++.|..    
T Consensus       138 i~g~~~~~g~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~------~~~~--~~~d~vl~~~g~~----  203 (305)
T cd08270         138 VTGASGGVGRFAVQLAALAG-AHVVAVVGSPARAEGLRE-LGAAEVVVGGS------ELSG--APVDLVVDSVGGP----  203 (305)
T ss_pred             EECCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH-cCCcEEEeccc------cccC--CCceEEEECCCcH----
Confidence            57889999999988777774 578888877766655433 32101110000      1111  3689999887641    


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                            .+...++.++..|++|.++..
T Consensus       204 ----------------------~~~~~~~~l~~~G~~v~~g~~  224 (305)
T cd08270         204 ----------------------QLARALELLAPGGTVVSVGSS  224 (305)
T ss_pred             ----------------------HHHHHHHHhcCCCEEEEEecc
Confidence                                  112234455778899988754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=86.80  E-value=1.8  Score=34.11  Aligned_cols=93  Identities=11%  Similarity=0.114  Sum_probs=60.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |||.|+-+.+  ++.. ...|+.+.++++.++........+.+.+.+-++.-+-++....+.+|.++-.-|..       
T Consensus        44 GtGsi~iE~a--~~~p-~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~~~daiFIGGg~~-------  113 (187)
T COG2242          44 GTGSITIEWA--LAGP-SGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLPSPDAIFIGGGGN-------  113 (187)
T ss_pred             CccHHHHHHH--HhCC-CceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCCCCCEEEECCCCC-------
Confidence            4566777766  3333 45899999999888777666666555555555555555544555789988777742       


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                                      .-.+++.++..+++.|++|.-..
T Consensus       114 ----------------i~~ile~~~~~l~~ggrlV~nai  136 (187)
T COG2242         114 ----------------IEEILEAAWERLKPGGRLVANAI  136 (187)
T ss_pred             ----------------HHHHHHHHHHHcCcCCeEEEEee
Confidence                            11245666677788888876543

>PRK08291 ectoine utilization protein EutC; Validated

Probab=86.76  E-value=1.5  Score=37.81  Aligned_cols=66  Identities=14%  Similarity=0.147  Sum_probs=46.0

Q ss_pred             CCCcHHHHHHHHHHH-hcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQ-QFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~-~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+.|++.+..|.. ++...|.+.+|++++.+...+++.+   +.+...++.++++.       .-|+||++....
T Consensus       139 GaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~-------~aDiVi~aT~s~  208 (330)
T PRK08291        139 GAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVA-------GADIIVTTTPSE  208 (330)
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHc-------cCCEEEEeeCCC
Confidence            568899998888886 4567899999999999988877653   22211233333333       579999887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	230
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		2e-52
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		3e-52
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		5e-51
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		3e-48
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		4e-18
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-09
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-08
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-08
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-08
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-08
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		5e-08
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-08
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-07
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-07
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		8e-07
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		8e-07
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-07
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		9e-07
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-06
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-06
1sny_A	267	Carbonyl Reductase Sniffer Of D. Melanogaster Lengt		3e-06
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-06
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		3e-06
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-06
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		4e-06
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		6e-06
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		7e-06
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-05
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-05
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-05
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		3e-05
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-05
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		3e-05
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-05
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-05
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-05
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-05
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		5e-05
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		6e-05
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		6e-05
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		6e-05
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		7e-05
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		9e-05
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		1e-04
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-04
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		2e-04
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		2e-04
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-04
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		3e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		4e-04
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		5e-04
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-04
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		6e-04
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		6e-04
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		6e-04
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		6e-04
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		6e-04
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		7e-04
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		8e-04
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		8e-04
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		9e-04

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/232 (46%), Positives = 148/232 (63%), Gaps = 10/232 (4%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGANKGIG+ IV+ L +QF G + LTARD +RGQ A+++LQ         +LDI+D  S
Sbjct: 9   VTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIIDLQS 68
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNAAIAF++++  PF  QA  TM+TN+    +VC  L PL+
Sbjct: 69  IRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCTELLPLI 128
Query: 112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +  GRVVNVSS+ G    +  S  L++K   E  + EEL  LMN+FVE  ++G H K GW
Sbjct: 129 KPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNGVHRKEGW 188
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
            +S Y  TK+GV+ LS +    L +    + +++N   PG+V TDM   K P
Sbjct: 189 SDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMGGPKAP 240

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score =  201 bits (511), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/231 (48%), Positives = 144/231 (62%), Gaps = 12/231 (5%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG NKGIG  IV+ L + F G + LTARD +RGQ A+++LQ         +LDI D  S
Sbjct: 9   VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 68
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L PL+
Sbjct: 69  IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 128
Query: 112 RSHGRVVNVSS--SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           +  GRVVNVSS  S   L   + E L++K   E  + EEL  LMN+FVE  + G H K G
Sbjct: 129 KPQGRVVNVSSIMSVRALKSCSPE-LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEG 187
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
           WP+SAY  TK+GVT LS +    LS+    + +++N   PG+V TDM+  K
Sbjct: 188 WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 238

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score =  197 bits (500), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 112/231 (48%), Positives = 143/231 (61%), Gaps = 12/231 (5%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG NKGIG  IV+ L + F G + LTARD +RGQ A+++LQ         +LDI D  S
Sbjct: 9   VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 68
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNA IAFKV    PF  QA  TM+TN+F   DV   L PL+
Sbjct: 69  IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVXTELLPLI 128
Query: 112 RSHGRVVNVSS--SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           +  GRVVNVSS  S   L   + E L++K   E  + EEL  LMN+FVE  + G H K G
Sbjct: 129 KPQGRVVNVSSIMSVRALKSCSPE-LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEG 187
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
           WP+SAY  TK+GVT LS +    LS+    + +++N   PG+V TDM+  K
Sbjct: 188 WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 238

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score =  187 bits (476), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 145/237 (61%), Gaps = 10/237 (4%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGAN+GIG  I + L +QF G + LTARD +RGQ A+++LQ         +LDI D  S
Sbjct: 7   VTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDLQS 66
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG++VLVNNAA+AFK +   PF  +A  T++TN+FA  ++C+ L P++
Sbjct: 67  IRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFATRNMCNELLPIM 126
Query: 112 RSHGRVVNVSS-SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           + HGRVVN+SS  C       SE L+++   E  +  +L  LM +FVE  ++  H + GW
Sbjct: 127 KPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTKNEVHEREGW 186
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           PNS Y  +KLGVT LS +    L +    + ++VN   PG V TDM       T+++
Sbjct: 187 PNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGKDSIRTVEE 243

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 51/272 (18%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQ----------KLDILDK 49
           VTG NKGIG+ I K L    +GI + LT RD ++G EA+EKL+          +LD+ D 
Sbjct: 17  VTGGNKGIGFEICKQLSS--NGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74
Query: 50  -NSIKALHDHLEAEHGGVDVLVNNAAIA-FKVNS---------------------SEPFG 86
             ++ +L D ++   G +D+LVNNA +A F V++                      +P  
Sbjct: 75  IATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEA 134
Query: 87  SQ--------ALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSE-AL 135
            +        A   ++ NY  +  V ++L PLL+     R+VNVSSS G L +V++E AL
Sbjct: 135 QELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETAL 194
Query: 136 KKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQ 195
           +     +  + E +  ++N  ++  ++      GWP+   A T    +K     +  +  
Sbjct: 195 EILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYT---TSKACLNAYTRVLA 251
Query: 196 DAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           + I +   VNCV PG V T+M+ G G  T ++
Sbjct: 252 NKIPK-FQVNCVCPGLVKTEMNYGIGNYTAEE 282

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
           VTGA  G G  I +  IQQ   +I  T R   R QE  ++L       +LD+ ++ +I+ 
Sbjct: 5   VTGATAGFGECITRRFIQQGHKVI-ATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEE 63
Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTNYFALIDVCDILFPLL-- 111
           +   L AE   +D+LVNNA +A  +  +     +   TM  TN   L+ +   + P +  
Sbjct: 64  MLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE 123
Query: 112 RSHGRVVNVSSSCG 125
           R+HG ++N+ S+ G
Sbjct: 124 RNHGHIINIGSTAG 137

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 58/230 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
           VTG ++G+G+GI +GL +    ++ + +R+     EA +KL           + D+ +  
Sbjct: 26  VTGGSRGLGFGIAQGLAEAGCSVV-VASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 84
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            +K L + ++ + G +D +VN A I  +  + E    +    +  N F    VC   F L
Sbjct: 85  EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 144
Query: 111 LRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           LR   +  ++N+ S                      +VEE++                  
Sbjct: 145 LRESDNPSIINIGSL---------------------TVEEVTM----------------- 166
Query: 169 GWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
             PN SAYAA+K GV  L+      L+++  R  + VN + PG+  T M+
Sbjct: 167 --PNISAYAASKGGVASLT----KALAKEWGRYGIRVNVIAPGWYRTKMT 210

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 59/228 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
           VTGA++GIG  I + L ++   +I     ++  G +A+        K   L++ +  SI+
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54  ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           A+   +  E GGVD+LVNNAAI      +   E   S  + T  T+ F L     +L  +
Sbjct: 75  AVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           ++   GR++NV S  G                                        T G 
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
              + YAA K GV  + F +   ++++     + VN V PG++ TDM+
Sbjct: 153 AGQANYAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGFIETDMT 196

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 57/227 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-----DILDKNSIKAL 55
           VTGA  G+G  I + L  Q   +     R+    + A E  +++     ++ D+ ++KAL
Sbjct: 12  VTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKAL 71
Query: 56  HDHLEAEHGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL- 111
               E E GGVD+LVNNA I      V  S+      L    T+ F L    ++  P++ 
Sbjct: 72  GQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTR--ELTHPMMR 129
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R +GR++N++S  G    VT                                     G P
Sbjct: 130 RRNGRIINITSIVG----VT-------------------------------------GNP 148
Query: 172 NSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
             A Y A+K G+   S      L+Q+    ++ VNC+ PG++ + M+
Sbjct: 149 GQANYCASKAGLIGFS----KSLAQEIASRNVTVNCIAPGFIESAMT 191

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 57/227 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-----DILDKNSIKAL 55
           VTGA  G+G  I + L  Q   +     R+    + A E  +++     ++ D+ ++KAL
Sbjct: 15  VTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKAL 74
Query: 56  HDHLEAEHGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL- 111
               E E GGVD+LVNNA I      V  S+      L    T+ F L    ++  P++ 
Sbjct: 75  GQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTR--ELTHPMMR 132
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R +GR++N++S  G    VT                                     G P
Sbjct: 133 RRNGRIINITSIVG----VT-------------------------------------GNP 151
Query: 172 NSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
             A Y A+K G+   S      L+Q+    ++ VNC+ PG++ + M+
Sbjct: 152 GQANYCASKAGLIGFS----KSLAQEIASRNVTVNCIAPGFIESAMT 194

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 59/228 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
           VTGA++GIG  I + L ++   +I     ++  G +A+        K   L++ +  SI+
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54  ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           A+   +  E GGVD+LVNNA I      +   E   S  + T  T+ F L     +L  +
Sbjct: 75  AVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           ++   GR++NV S  G                                        T G 
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
              + YAA K GV  + F +   ++++     + VN V PG++ TDM+
Sbjct: 153 AGQANYAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGFIETDMT 196

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 59/228 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
           VTGA++GIG  I + L ++   +I     ++  G +A+        K   L++ +  SI+
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54  ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           A+   +  E GGVD+LVNNA I      +   E   S  + T  T+ F L     +L  +
Sbjct: 75  AVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           ++   GR++NV S  G                                        T G 
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
              + YAA K GV  + F +   ++++     + VN V PG++ TDM+
Sbjct: 153 AGQANYAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGFIETDMT 196

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 59/228 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
           VTGA++GIG  I + L ++   +I     ++  G +A+        K   L++ +  SI+
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54  ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           A+   +  E GGVD+LVNNA I      +   E   S  + T  T+ F L     +L  +
Sbjct: 75  AVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           ++   GR++NV S  G                                        T G 
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
              + +AA K GV  + F +   ++++     + VN V PG++ TDM+
Sbjct: 153 AGQANFAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGFIETDMT 196

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 59/228 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
           VTGA++GIG  I + L ++   +I     ++  G +A+        K   L++ +  SI+
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54  ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           A+   +  E GGVD+LVNNA I      +   E   S  + T  T+ F L     +L  +
Sbjct: 75  AVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           ++   GR++NV S  G                                        T G 
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
              + YAA K GV  + F +   ++++     + VN V PG + TDM+
Sbjct: 153 AGQANYAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGAIETDMT 196

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 59/232 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-----------GQEALEKLQKLDILDK 49
           VTGA++GIG  I + L       + LTARD  +           G EA  +    D+   
Sbjct: 34  VTGASRGIGAAIARKL-GSLGARVVLTARDVEKLRAVEREIVAAGGEA--ESHACDLSHS 90
Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
           ++I A    + A HG  DVLVNNA + +       FG   LHTM+   +  +   ++  P
Sbjct: 91  DAIAAFATGVLAAHGRCDVLVNNAGVGW-------FGGP-LHTMKPAEWDALIAVNLKAP 142
Query: 110 --LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
             LLR+    + +++  GH+ +++S A K  +                      DG    
Sbjct: 143 YLLLRAFAPAM-IAAKRGHIINISSLAGKNPV---------------------ADG---- 176
Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                +AY A+K G+  L       L Q  +R    V+ V PG V T+   G
Sbjct: 177 -----AAYTASKWGLNGLMTSAAEELRQHQVR----VSLVAPGSVRTEFGVG 219

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIY--LTARDASRGQEALEKL------QKLDILDKNSI 52
           VTGA+ GIG+ I     +    I++  +      RG  A +           D+ D++ I
Sbjct: 39  VTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGI 98
Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL- 111
           +A+   +E+E G +D+LVNNA I  +V   E   +Q    +  +  A   V   + P + 
Sbjct: 99  QAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMI 158
Query: 112 -RSHGRVVNVSSSCGHLCHVTSEA 134
            + HG+++N+ S    L   T  A
Sbjct: 159 KKGHGKIINICSMMSELGRETVSA 182

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 62/231 (26%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---------KLQKLDILDKNS 51
           VTGA+KGIG  I + L      I     RDA+  QE L          +L   D+ ++  
Sbjct: 31  VTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQ 90
Query: 52  IKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
            + + +H  A+HG    +V+NA I    AF   S++ + +  +HT   +++ +I  C  +
Sbjct: 91  CREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDA-VIHTNLDSFYNVIQPC--I 147
Query: 108 FPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
            P++  R  GR++ +SS  G + +                                    
Sbjct: 148 MPMIGARQGGRIITLSSVSGVMGN------------------------------------ 171
Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            +G    SA  A  +G TK        L+ +  +  + VNC+ PG ++T M
Sbjct: 172 -RGQVNYSAAKAGIIGATK-------ALAIELAKRKITVNCIAPGLIDTGM 214

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 56/230 (24%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRG------QEALE-KLQKLDILDKNSI 52
           VTGA++GIG  I   L ++   +I     +A + G      Q  LE +   L++ D  ++
Sbjct: 33  VTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAV 92
Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCD-ILFPLL 111
            AL +    E G ++VLVNNA I     +      +    + TN  A+  +   +L P++
Sbjct: 93  DALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMM 152
Query: 112 RSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           ++  GR+VN++S  G                                           G 
Sbjct: 153 KARGGRIVNITSVVGS-----------------------------------------AGN 171
Query: 171 PNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
           P    YAA K GV  ++      L+++     + VNCV PG+++TDM+ G
Sbjct: 172 PGQVNYAAAKAGVAGMTR----ALAREIGSRGITVNCVAPGFIDTDMTKG 217

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 63/231 (27%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG   GIG  I + L +    ++     ++ R  + LE  + L         ++ D +S
Sbjct: 18  VTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDS 77
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
            K   D ++AE G +DVLVNNA I     F+  + E +  QA+  + TN  +L +V   +
Sbjct: 78  TKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDW--QAV--IDTNLTSLFNVTKQV 133
Query: 108 FPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
              +  R  GR++N+SS  G                                        
Sbjct: 134 IDGMVERGWGRIINISSVNGQ--------------------------------------- 154
Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            KG +  + Y+  K G+   +      L+Q+   + + VN V PGY+ TDM
Sbjct: 155 -KGQFGQTNYSTAKAGIHGFTM----SLAQEVATKGVTVNTVSPGYIGTDM 200

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 57/227 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
           VTGA++GIG  I + L  +  G   +    +  G +A+        K   L++ D  SI+
Sbjct: 10  VTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIE 67
Query: 54  ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           ++ + + AE G VD+LVNNA I      +   +   +  + T  ++ F L     +   +
Sbjct: 68  SVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAV-MRAMM 126
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
            + HGR++ + S  G + +                                      GG 
Sbjct: 127 KKRHGRIITIGSVVGTMGN--------------------------------------GGQ 148
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
            N  YAA K G+   S      L+++     + VN V PG++ TDM+
Sbjct: 149 AN--YAAAKAGLIGFS----KSLAREVASRGITVNVVAPGFIETDMT 189

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 84/225 (37%), Gaps = 53/225 (23%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA++GIG  I   L      ++   A  A+  +E   K++         + D+ D  +
Sbjct: 32  VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAA 91
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           ++ L    E   GGVDVLVNNA I      +E   +     +  N     +        L
Sbjct: 92  VRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL 151
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R  GR++N S+S            +  LLH    +                         
Sbjct: 152 RVGGRIINXSTS------------QVGLLHPSYGI------------------------- 174
Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
              YAA K GV   +     +LS++    D+ VN V PG   TD+
Sbjct: 175 ---YAAAKAGVEAXTH----VLSKELRGRDITVNAVAPGPTATDL 212

>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 47/241 (19%)
Query: 1   VTGANKGIGYGIVKGLIQ--QFDGIIYLTARDASRGQEALEKLQK---------LDILDK 49
           +TG N+G+G G+VK L+   Q    ++ T R+  + +E LE L K         +D+ + 
Sbjct: 26  ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNF 84
Query: 50  NSIKALHDHLEA--EHGGVDVLVNNAAIAFKVNSSEPFGSQA-LHTMRTNYFALIDVCDI 106
           ++   L   +E   +  G++VL NNA IA K        SQ  L T++TN    I +   
Sbjct: 85  DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIXLAKA 144
Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
             PLL+   +  N S   G                        +A++N    L     +T
Sbjct: 145 CLPLLKKAAK-ANESQPXG---------------------VGRAAIINXSSILGSIQGNT 182
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHAL--LSQDAIREDLVVNCVHPGYVNTDMSSGKGPLT 224
            GG    AY  +K      S L  A   LS D   + +    +HPG+V TD      PL 
Sbjct: 183 DGG--XYAYRTSK------SALNAATKSLSVDLYPQRIXCVSLHPGWVKTDXGGSSAPLD 234
Query: 225 I 225
           +
Sbjct: 235 V 235

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------------LD 45
           +TGA+ GIG       ++  +G + L    A+R  E LE+L+K               LD
Sbjct: 38  ITGASAGIGKATALEYLEASNGDMKLIL--AARRLEKLEELKKTIDQEFPNAKVHVAQLD 95
Query: 46  ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVC 104
           I     IK   ++L  E   +D+LVNNA  A   +      ++ +     TN  ALI++ 
Sbjct: 96  ITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINIT 155
Query: 105 DILFPLL--RSHGRVVNVSSSCGHLCHVT 131
             + P+   ++ G +VN+ S  G   + T
Sbjct: 156 QAVLPIFQAKNSGDIVNLGSIAGRDAYPT 184

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 61/229 (26%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
           VTGA++GIG  I + L  +  G   +    +  G +A+        K   L++ D  SI+
Sbjct: 10  VTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIE 67
Query: 54  ALHDHLEAEHGGVDVLVNNAAIA-----FKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
           ++ + + AE G VD+LVNNA I       ++   E   +  + T  ++ F L     +  
Sbjct: 68  SVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW--NDIIETNLSSVFRLSKAV-MRA 124
Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
            + + HGR++ + S  G + +                                      G
Sbjct: 125 MMKKRHGRIITIGSVVGTMGN--------------------------------------G 146
Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
           G  N  +AA K G+   S      L+++     + VN V PG++ TDM+
Sbjct: 147 GQAN--FAAAKAGLIGFS----KSLAREVASRGITVNVVAPGFIETDMT 189

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 1   VTGANKGIGYGIVKGLIQ------QFDGIIYLTARDAS---------RGQEALEKLQKLD 45
           +TGA KGIG  I     +       F+ ++ L++R A+         R + AL      D
Sbjct: 7   ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITAD 66
Query: 46  ILDKNSIKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALI 101
           I D   ++ L  H+   +G +D LVNNA +    A    + E F     +TM TN     
Sbjct: 67  ISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFD----YTMNTNLKGTF 122
Query: 102 DVCDILFPLL-RSHGRVVNVSSSCGHLCHVTSEALKKKLLH 141
            +   LF L+ R H          GH+  +TS A  K   H
Sbjct: 123 FLTQALFALMERQHS---------GHIFFITSVAATKAFRH 154

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 53/221 (23%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG N+GIG  I +      D +  +T R     +  L    K DI D   ++  +  +E
Sbjct: 26  VTGGNRGIGLAIARAFADAGDKV-AITYRSGEPPEGFLA--VKCDITDTEQVEQAYKEIE 82
Query: 61  AEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGR 116
             HG V+VL+ NA +      +  SE   +  + T  T  F ++   +    +LR+  GR
Sbjct: 83  ETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRAN--RAMLRAKKGR 140
Query: 117 VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYA 176
           VV +SS  G L                                        G    + YA
Sbjct: 141 VVLISSVVGLL----------------------------------------GSAGQANYA 160
Query: 177 ATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
           A+K G+  + F +   L+++    ++  N V PG+V+TDM+
Sbjct: 161 ASKAGL--VGFARS--LARELGSRNITFNVVAPGFVDTDMT 197

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 88/227 (38%), Gaps = 57/227 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
           VTGA++GIG  I + L ++   +I     ++  G +A+        K   L++ +  SI+
Sbjct: 14  VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGXALNVTNPESIE 71
Query: 54  ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
           A+   +  E GGVD+LVNNA I          E   S    T  T+ F L     +    
Sbjct: 72  AVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRLSKAV-LRGXX 130
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
            +  GR++NV S  G                                        T G  
Sbjct: 131 KKRQGRIINVGSVVG----------------------------------------TXGNA 150
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
             + YAA K GV  + F +    +++     + VN V PG++ TD +
Sbjct: 151 GQANYAAAKAGV--IGFTKSX--AREVASRGVTVNTVAPGFIETDXT 193

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 86/224 (38%), Gaps = 53/224 (23%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
           +TG++ GIG  I +G  ++   I+ L AR   R  EA   L++          +D+    
Sbjct: 12  ITGSSSGIGLAIAEGFAKEGAHIV-LVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            + A+ + + +  GG D+LVNNA         E    +       +  A + +   L P 
Sbjct: 71  GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLARGLVPG 130
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +R+ G         G + H  S          I +V+ L                    W
Sbjct: 131 MRARG--------GGAIIHNAS----------ICAVQPL--------------------W 152
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
               Y  TK  +   S      L+ + I++++ VNC++PG + T
Sbjct: 153 YEPIYNVTKAALMMFS----KTLATEVIKDNIRVNCINPGLILT 192

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 59/230 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA++GIG  I   L +Q   ++   A +  +  E +++++KL         D+ +   
Sbjct: 9   VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAED 68
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDIL---F 108
           +  +        G VD+LVNNA +  K N       +   T+       + +C      F
Sbjct: 69  VTNMVKQTVDVFGQVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRF 127
Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
            + + HGR+VN++S  G    VT                                     
Sbjct: 128 MMRQRHGRIVNIASVVG----VT------------------------------------- 146
Query: 169 GWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
           G P  A Y A K GV  L+      L+      ++ VN + PG++ TDM+
Sbjct: 147 GNPGQANYVAAKAGVIGLTKTSAKELAS----RNITVNAIAPGFIATDMT 192

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 85/224 (37%), Gaps = 53/224 (23%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
           +TG++ GIG  I +G  ++   I+ L AR   R  EA   L++          +D+    
Sbjct: 12  ITGSSSGIGLAIAEGFAKEGAHIV-LVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            + A+ + + +  GG D+LVNNA         E    +          A + +   L P 
Sbjct: 71  GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPG 130
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +R+ G         G + H  S          I +V+ L                    W
Sbjct: 131 MRARG--------GGAIIHNAS----------ICAVQPL--------------------W 152
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
               Y  TK  +   S      L+ + I++++ VNC++PG + T
Sbjct: 153 YEPIYNVTKAALMMFS----KTLATEVIKDNIRVNCINPGLILT 192

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
           VTGA  GIG  I + L ++  G+ +++ AR     +  L++L++          D+    
Sbjct: 31  VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
            I+AL   +   +G VDVLVNNA       ++E      L  + TN   +  V   +   
Sbjct: 89  EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
              L R  GR+VN++S+ G          K+ L+H                         
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGLVHA------------------------ 174
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y+A+K GV   +      L  +  R  + VN V PG+V T M++
Sbjct: 175 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 25/133 (18%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
           +TGAN G+G    + L ++   +I +  RD  +G+ A   +      ++LD+ D +S++ 
Sbjct: 21  ITGANSGLGAVTARELARRGATVI-MAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRR 79
Query: 55  LHDHLEAEHGGVDVLVNNAAI-----AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
             D +     G DVL+NNA I     A  V+    F SQ    + TN+     + ++L P
Sbjct: 80  FADGVS----GADVLINNAGIMAVPYALTVDG---FESQ----IGTNHLGHFALTNLLLP 128
Query: 110 LLRSHGRVVNVSS 122
            L    RVV VSS
Sbjct: 129 RLTD--RVVTVSS 139

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
          VTGA+ GIG  I +  + +   +I L+  D   G+   + ++  D+ + + +KA  DH+ 
Sbjct: 13 VTGASMGIGRAIAERFVDEGSKVIDLSIHDP--GEAKYDHIE-CDVTNPDQVKASIDHIF 69
Query: 61 AEHGGVDVLVNNAAI 75
           E+G + VLVNNA I
Sbjct: 70 KEYGSISVLVNNAGI 84

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
          VTGA+ GIG  I +  + +   +I L+  D   G+   + ++  D+ + + +KA  DH+ 
Sbjct: 20 VTGASMGIGRAIAERFVDEGSKVIDLSIHDP--GEAKYDHIE-CDVTNPDQVKASIDHIF 76
Query: 61 AEHGGVDVLVNNAAI 75
           E+G + VLVNNA I
Sbjct: 77 KEYGSISVLVNNAGI 91

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
           VTGA  GIG  I + L ++  G+ +++ AR     +  L++L++          D+    
Sbjct: 31  VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
            I+AL   +   +G VDVLVNNA       ++E      L  + TN   +  V   +   
Sbjct: 89  EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
              L R  GR+VN++S+ G          K+ ++H                         
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGVVH------------------------- 173
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y+A+K GV   +      L  +  R  + VN V PG+V T M++
Sbjct: 174 -----AAPYSASKHGVVGFT----KALGLELARTGITVNAVCPGWVETPMAA 216

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
           VTGA  GIG  I + L ++  G+ +++ AR     +  L++L++          D+    
Sbjct: 31  VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
            I+AL   +   +G VDVLVNNA       ++E      L  + TN   +  V   +   
Sbjct: 89  EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
              L R  GR+VN++S+ G          K+ ++H                         
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGVVHA------------------------ 174
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y+A+K GV   +      L  +  R  + VN V PG+V T M++
Sbjct: 175 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
           VTGA  GIG  I + L ++  G+ +++ AR     +  L++L++          D+    
Sbjct: 31  VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
            I+AL   +   +G VDVLVNNA       ++E      L  + TN   +  V   +   
Sbjct: 89  EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
              L R  GR+VN++S+ G          K+ ++H                         
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGVVHA------------------------ 174
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y+A+K GV   +      L  +  R  + VN V PG+V T M++
Sbjct: 175 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
           VTGA  GIG  I + L ++  G+ +++ AR     +  L++L++          D+    
Sbjct: 27  VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
            I+AL   +   +G VDVLVNNA       ++E      L  + TN   +  V   +   
Sbjct: 85  EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
              L R  GR+VN++S+ G          K+ ++H                         
Sbjct: 145 GGMLERGTGRIVNIASTGG----------KQGVVH------------------------- 169
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y+A+K GV   +      L  +  R  + VN V PG+V T M++
Sbjct: 170 -----AAPYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 212

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
           VTGA  GIG  I + L ++  G+ +++ AR     +  L++L++          D+    
Sbjct: 11  VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 68
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
            I+AL   +   +G VDVLVNNA       ++E      L  + TN   +  V   +   
Sbjct: 69  EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 128
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
              L R  GR+VN++S+ G          K+ ++H                         
Sbjct: 129 GGMLERGTGRIVNIASTGG----------KQGVVH------------------------- 153
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y+A+K GV   +      L  +  R  + VN V PG+V T M++
Sbjct: 154 -----AAPYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 196

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIY--------LTARDASRGQEALEKLQKLDILDKNSI 52
           VTG+  GIG GI + L +    I+           A  A  G +A+      D+ D   I
Sbjct: 9   VTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVH--HPADLSDVAQI 66
Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDILFPLL 111
           +AL    E E GGVD+LVNNA I   V   E F  ++    +  N  A+     +  P +
Sbjct: 67  EALFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGM 125
Query: 112 RSH--GRVVNVSSSCG 125
           R+   GR++N++S  G
Sbjct: 126 RARNWGRIINIASVHG 141

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 47/179 (26%)
Query: 42  QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALI 101
           ++ D+ D  S++A+ D   AE G +D+LV+N  I+ +         Q    ++TN     
Sbjct: 112 RQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAW 171
Query: 102 DVCDILFPLLRSHGR---VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
             C  + P +   G+   V+ VSS+ G                                 
Sbjct: 172 HACRAVLPSMIERGQGGSVIFVSSTVG--------------------------------- 198
Query: 159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
                   +G    S YAA+K GV  L       L+ +  R ++ VN V+PG VNT+M+
Sbjct: 199 -------LRGAPGQSHYAASKHGVQGLML----SLANEVGRHNIRVNSVNPGAVNTEMA 246

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
           VTGA  GIG  I + L ++  G+ +++ AR     +  L++L++          D+    
Sbjct: 27  VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
            I+AL   +   +G VDVLVNNA       ++E      L  + TN   +  V   +   
Sbjct: 85  EIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
              L R  GR+VN++S+ G          K+ ++H                         
Sbjct: 145 GGMLERGTGRIVNIASTGG----------KQGVVHA------------------------ 170
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y+A+K GV   +      L  +  R  + VN V PG+V T M++
Sbjct: 171 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 212

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
           VTGA  GIG  I + L ++  G+ +++ AR     +  L++L++          D+    
Sbjct: 31  VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
            I+AL   +   +G VDVLVNNA       ++E      L  + TN   +  V   +   
Sbjct: 89  EIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
              L R  GR+VN++S+ G          K+ ++H                         
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGVVHA------------------------ 174
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 + Y+A+K GV   +      L  +  R  + VN V PG+V T M++
Sbjct: 175 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 92/228 (40%), Gaps = 56/228 (24%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA +GIG  I K L +    +I ++ R        +++++           D+  K  
Sbjct: 49  VTGAGRGIGREIAKMLAKSVSHVICIS-RTQKSCDSVVDEIKSFGYESSGYAGDVSKKEE 107
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I  + + +  EH  VD+LVNNA I            +    +RTN  +L  +   +   +
Sbjct: 108 ISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRM 167
Query: 112 --RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
               +GR++N+SS  G   +V                                      G
Sbjct: 168 INNRYGRIINISSIVGLTGNV--------------------------------------G 189
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
             N  Y+++K GV  + F +   L+++    ++ VN + PG++++DM+
Sbjct: 190 QAN--YSSSKAGV--IGFTKS--LAKELASRNITVNAIAPGFISSDMT 231

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 86/241 (35%), Gaps = 85/241 (35%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKA 54
           VTGA  GIG  I +    Q   I+ L      + +E    L K       ++ D+ SIK 
Sbjct: 32  VTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQ 90
Query: 55  LHDHLEAEHGGVDVLVNNAAI------------------AFKVNSSEPFGSQALHTMRTN 96
           L +  E E  G+D+LVNNA I                  A  + ++     + +H+M   
Sbjct: 91  LAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSM--- 147
Query: 97  YFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF 156
                        + R +GR++N++S  G +                             
Sbjct: 148 -------------MRRRYGRIINITSIVGVV----------------------------- 165
Query: 157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                      G    + Y A K G+   S      L+Q+    ++ VNC+ PG++ + M
Sbjct: 166 -----------GNPGQTNYCAAKAGLIGFS----KALAQEIASRNITVNCIAPGFIKSAM 210
Query: 217 S 217
           +
Sbjct: 211 T 211

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG +KGIGY IV+ L       +Y  +R+     E LE  ++  +  + S+  L    E
Sbjct: 26  VTGGSKGIGYAIVEEL-AGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTE 84
Query: 61  AEH----------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            +           G +++LVNNA +     + +         M TN+ A   +  I +PL
Sbjct: 85  RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPL 144
Query: 111 LRS--HGRVVNVSSSCG 125
           L++  +G V+ +SS  G
Sbjct: 145 LKASQNGNVIFLSSIAG 161

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 68/188 (36%), Gaps = 54/188 (28%)
Query: 40  KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRT 95
           + Q LD+  +   + +  +   E G VD LVNNA I+     +  S E F       +  
Sbjct: 54  RYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERF----RKVVEI 109
Query: 96  NYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM 153
           N   +      + P ++    G +VN+SS+ G +    +                     
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT--------------------- 148
Query: 154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN 213
                              S+Y A+K GV  LS L    L  D IR    VN VHPG   
Sbjct: 149 -------------------SSYGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTY 185
Query: 214 TDMSSGKG 221
           T M++  G
Sbjct: 186 TPMTAETG 193

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 68/188 (36%), Gaps = 54/188 (28%)
Query: 40  KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRT 95
           + Q LD+  +   + +  +   E G VD LVNNA I+     +  S E F       +  
Sbjct: 54  RYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERF----RKVVEI 109
Query: 96  NYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM 153
           N   +      + P ++    G +VN+SS+ G +    +                     
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT--------------------- 148
Query: 154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN 213
                              S+Y A+K GV  LS L    L  D IR    VN VHPG   
Sbjct: 149 -------------------SSYGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTY 185
Query: 214 TDMSSGKG 221
           T M++  G
Sbjct: 186 TPMTAETG 193

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 59/231 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG+ +G+G+   +GL      +I    R A+   E+++ L +          D+ D+ +
Sbjct: 14  VTGSARGLGFAYAEGLAAAGARVILNDIR-ATLLAESVDTLTRKGYDAHGVAFDVTDELA 72
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV-CDILFPL 110
           I+A    L+AE   VD+L+NNA I ++    +P     L     N+  +ID      F +
Sbjct: 73  IEAAFSKLDAEGIHVDILINNAGIQYR----KPMVELELE----NWQKVIDTNLTSAFLV 124
Query: 111 LRSHGRVVNVSSSCGHLCHV---TSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
            RS  + +   +S G + ++   TS+A +  +                            
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTV---------------------------- 156
Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                + Y A K G+  L+    A  +Q  I+     N + PGY+ TDM++
Sbjct: 157 -----APYTAAKGGIKMLTCSMAAEWAQFNIQ----TNAIGPGYILTDMNT 198

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 71/190 (37%), Gaps = 50/190 (26%)
Query: 29  RDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQ 88
           RDA R  +A      +D+ D  S +   + + A+ G VDVL+NNA I       +     
Sbjct: 71  RDAGRDFKAY----AVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGD 126
Query: 89  ALHTMRTNYFALIDVCDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV 146
               MRT+  A+ +V       +  R  GR+VN+ S  G                     
Sbjct: 127 WDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNG--------------------- 165
Query: 147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNC 206
                              ++G +  + YA+ K G+   +      L+ +  +  + VN 
Sbjct: 166 -------------------SRGAFGQANYASAKAGIHGFT----KTLALETAKRGITVNT 202
Query: 207 VHPGYVNTDM 216
           V PGY+ T M
Sbjct: 203 VSPGYLATAM 212

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           VTG ++GIG  I +GL++     +++ ARDA    +   +L           D+  +   
Sbjct: 34  VTGGSRGIGQMIAQGLLEA-GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGA 92
Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVN-SSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           + L   L      +D+LVNNA  ++     S P  S     M+ N  ++      L PLL
Sbjct: 93  RRLAQALGELSARLDILVNNAGTSWGAALESYPV-SGWEKVMQLNVTSVFSCIQQLLPLL 151
Query: 112 R------SHGRVVNVSSSCG 125
           R      +  RV+N+ S  G
Sbjct: 152 RRSASAENPARVINIGSVAG 171

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 86/242 (35%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGI----IYLTARDASRGQEALEKL---------QKLDIL 47
           +TGA+ GIG GI + L     G+    I L AR  +R +    ++         Q LD+ 
Sbjct: 9   ITGASGGIGEGIAREL-----GVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT 63
Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAI-------AFKVNSSEPFGSQALHTMRTNYFAL 100
           D++S+ A         G +DVLVNNA +       A KV+  E         +  N   +
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWE-------RMIDVNIKGV 116
Query: 101 IDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
           +     + P++ +   G+++N+  S G L  V + A+                       
Sbjct: 117 LWGIGAVLPIMEAQRSGQIINI-GSIGALSVVPTAAV----------------------- 152
Query: 159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIRED---LVVNCVHPGYVNTD 215
                           Y ATK  V  +S         D +R++   + V CV+PG V ++
Sbjct: 153 ----------------YCATKFAVRAIS---------DGLRQESTNIRVTCVNPGVVESE 187
Query: 216 MS 217
           ++
Sbjct: 188 LA 189

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------------LDIL 47
          VTG+  GIG    + L ++   ++      A    EA E + K             +D+ 
Sbjct: 14 VTGSGGGIGQAYAEALAREGAAVVV-----ADINAEAAEAVAKQIVADGGTAISVAVDVS 68
Query: 48 DKNSIKALHDHLEAEHGGVDVLVNNAAI 75
          D  S KA+ D   AE GG+D LVNNAAI
Sbjct: 69 DPESAKAMADRTLAEFGGIDYLVNNAAI 96

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 45  DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMR-----TNYFA 99
           DI D   +  L D     +G VDV++NN   AF+V S +PF +     MR     T + A
Sbjct: 68  DITDDAQVAHLVDETMKAYGRVDVVINN---AFRVPSMKPFANTTFEHMRDAIELTVFGA 124
Query: 100 LIDVCDILFPLLRSHGRVVNVSS 122
           L  +      L  S G VVNV+S
Sbjct: 125 LRLIQGFTPALEESKGAVVNVNS 147

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 84/230 (36%), Gaps = 60/230 (26%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
           VTGA++GIG+ +   L  +   ++      AS   E  E   K          L+I D  
Sbjct: 10  VTGASRGIGFEVAHALASKGATVVGTATSQAS--AEKFENSXKEKGFKARGLVLNISDIE 67
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
           SI+     ++AE+  +D+LVNNA I         SE      ++T  ++ F     C + 
Sbjct: 68  SIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSIFRXSKEC-VR 126
Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
               +  GR++++ S  G                                        + 
Sbjct: 127 GXXKKRWGRIISIGSVVG----------------------------------------SA 146
Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
           G    + Y A K GV   S      L+ +    ++ VN V PG++ TD +
Sbjct: 147 GNPGQTNYCAAKAGVIGFS----KSLAYEVASRNITVNVVAPGFIATDXT 192

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG ++GIGYGIV+ L       +Y  +R+     + L + +      + S+  L    E
Sbjct: 14  VTGGSRGIGYGIVEEL-ASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 72
Query: 61  AE----------HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            +          HG +++LVNNA I     + +         M  N+ A   +  +  P 
Sbjct: 73  RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 132
Query: 111 LRS--HGRVVNVSSSCGHL 127
           L++   G VV +SS  G L
Sbjct: 133 LKASERGNVVFISSVSGAL 151

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG ++GIGYGIV+ L       +Y  +R+     + L + +      + S+  L    E
Sbjct: 13  VTGGSRGIGYGIVEEL-ASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 71
Query: 61  AE----------HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            +          HG +++LVNNA I     + +         M  N+ A   +  +  P 
Sbjct: 72  RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 131
Query: 111 LRS--HGRVVNVSSSCGHL 127
           L++   G VV +SS  G L
Sbjct: 132 LKASERGNVVFISSVSGAL 150

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 1   VTGANKGIGYGIVKGLIQQ----------FDGIIYLTARDASRGQEALEKLQKLDILDKN 50
           VTGA+ GIG  + + L+QQ             I  L A   S G        + D+ ++ 
Sbjct: 37  VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEE 96
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIA 76
            I ++   + ++H GVD+ +NNA +A
Sbjct: 97  DILSMFSAIRSQHSGVDICINNAGLA 122

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARD--ASRGQEALEKLQKLDILDKNSIKALHD 57
           VTG N+GIG  I + L    DG  + +T R   A +G   +E    +D+ D +++     
Sbjct: 40  VTGGNRGIGLAIAQRLAA--DGHKVAVTHRGSGAPKGLFGVE----VDVTDSDAVDRAFT 93
Query: 58  HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRV 117
            +E   G V+VLV+NA +     S++ F    L  M    F                 +V
Sbjct: 94  AVEEHQGPVEVLVSNAGL-----SADAF----LMRMTEEKFE----------------KV 128
Query: 118 VNVS-SSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA-Y 175
           +N + +    +    S ++++     +  +  +S L                G  N A Y
Sbjct: 129 INANLTGAFRVAQRASRSMQRNKFGRMIFIASVSGLW---------------GIGNQANY 173
Query: 176 AATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
           AA+K GV  ++      ++++  + ++  N V PGY++TDM+
Sbjct: 174 AASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 211

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARD--ASRGQEALEKLQKLDILDKNSIKALHD 57
           VTG N+GIG  I + L    DG  + +T R   A +G   +E    +D+ D +++     
Sbjct: 20  VTGGNRGIGLAIAQRLAA--DGHKVAVTHRGSGAPKGLFGVE----VDVTDSDAVDRAFT 73
Query: 58  HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRV 117
            +E   G V+VLV+NA +     S++ F    L  M    F                 +V
Sbjct: 74  AVEEHQGPVEVLVSNAGL-----SADAF----LMRMTEEKFE----------------KV 108
Query: 118 VNVS-SSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA-Y 175
           +N + +    +    S ++++     +  +  +S L                G  N A Y
Sbjct: 109 INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW---------------GIGNQANY 153
Query: 176 AATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
           AA+K GV  ++      ++++  + ++  N V PGY++TDM+
Sbjct: 154 AASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 191

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 59/231 (25%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
           VTG+ +GIG  I + L      +I +T     R +   E++           ++++L + 
Sbjct: 12  VTGSTRGIGRAIAEKLASAGSTVI-ITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEE 70
Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
           SI    + +     G+D+LVNNA I      +  S     + L    T  F L+    + 
Sbjct: 71  SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTF-LVTQNSLR 129
Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
             + +  GR+VN+SS  G   +V                                     
Sbjct: 130 KMIKQRWGRIVNISSVVGFTGNV------------------------------------- 152
Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
            G  N  Y+ TK G+  + F +   L+++    +++VN V PG++ TDM++
Sbjct: 153 -GQVN--YSTTKAGL--IGFTKS--LAKELAPRNVLVNAVAPGFIETDMTA 196

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 66/233 (28%)
Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTGA++GIG  I   L  +   ++  TA  AS  ++  E L+          LD+    S
Sbjct: 32  VTGASRGIGQAIALEL-GRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDES 90
Query: 52  IKALHDHLEAEHGGVDVLVNNAAIA-----FKVNSSEPFGSQALHTMRTNYFALIDVCD- 105
           + A  +H++   G   ++VNNA I       ++   E F       + TN  +L  +   
Sbjct: 91  VAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWF-----DVVNTNLNSLYRLSKA 145
Query: 106 ILFPLLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
           +L  + ++  GR++N+ S  G + +                                   
Sbjct: 146 VLRGMTKARWGRIINIGSVVGAMGNA---------------------------------- 171
Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
               G  N  YAA K G   L     AL  +   R  + VN V PG+++TDM+
Sbjct: 172 ----GQTN--YAAAKAG---LEGFTRALAREVGSRA-ITVNAVAPGFIDTDMT 214

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	230
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	3e-85
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-63
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-39
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-34
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-26
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-24
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	9e-24
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	7e-23
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	7e-23
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-22
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-22
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-21
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-21
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	4e-21
1spx_A	278	Short-chain reductase family member (5L265); paral	5e-21
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-20
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-20
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-20
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-20
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-20
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	5e-20
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	5e-20
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	8e-20
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	8e-20
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-19
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-19
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-19
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-19
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-19
4e4y_A	244	Short chain dehydrogenase family protein; structur	2e-19
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-19
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-19
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	7e-19
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	9e-19
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-18
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-18
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-18
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-18
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-18
1xhl_A	297	Short-chain dehydrogenase/reductase family member	3e-18
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-18
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	3e-18
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-18
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-18
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	4e-18
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	5e-18
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	5e-18
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-18
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	6e-18
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	7e-18
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	8e-18
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	9e-18
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-17
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-17
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-17
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-17
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-17
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-17
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-17
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-17
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-17
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-17
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-17
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-17
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-17
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-17
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-17
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-17
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	5e-17
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	6e-17
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	6e-17
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	6e-17
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	6e-17
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	7e-17
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-16
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-16
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	1e-16
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-16
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-16
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-16
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-16
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-16
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-16
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-16
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-16
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-16
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-16
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-16
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	4e-16
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	4e-16
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	7e-16
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	8e-16
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	9e-16
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	9e-16
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-15
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-15
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-15
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-15
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-15
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-15
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-15
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-15
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	4e-15
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-15
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	4e-15
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-15
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	4e-15
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-15
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	5e-15
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	7e-15
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	7e-15
3imf_A	257	Short chain dehydrogenase; structural genomics, in	8e-15
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	8e-15
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-14
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-14
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-14
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-14
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-14
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-14
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-14
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-14
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-14
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-14
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	3e-14
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-14
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	4e-14
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-14
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-14
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	5e-14
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	5e-14
3rih_A	293	Short chain dehydrogenase or reductase; structural	6e-14
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	6e-14
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-14
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-13
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-13
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-13
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	3e-13
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-13
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-13
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-12
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-12
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-12
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-12
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-12
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	5e-12
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	6e-12
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	6e-12
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	8e-12
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-11
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-11
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-11
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-11
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-11
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-11
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-11
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-11
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-11
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-11
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	3e-11
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-11
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	4e-11
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	5e-11
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	6e-11
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	7e-11
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	9e-11
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-10
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-10
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-10
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	5e-10
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	5e-10
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	6e-10
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	7e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-10
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	8e-10
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-09
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-09
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-09
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-09
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-08
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	7e-08
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-07
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-05
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-04
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	6e-04

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  253 bits (648), Expect = 3e-85
 Identities = 111/237 (46%), Positives = 144/237 (60%), Gaps = 10/237 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG NKGIG  IV+ L + F G + LTARD +RGQ A+++LQ          LDI D  S
Sbjct: 9   VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 68

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L PL+
Sbjct: 69  IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 128

Query: 112 RSHGRVVNVSSSCGHLCHVT-SEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +  GRVVNVSS        + S  L++K   E  + EEL  LMN+FVE  + G H K GW
Sbjct: 129 KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGW 188

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           P+SAY  TK+GVT LS +    LS+    + +++N   PG+V TDM+  K   + ++
Sbjct: 189 PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEE 245

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  198 bits (504), Expect = 3e-63
 Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 53/273 (19%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
           VTG NKGIG+ I K L      ++ LT RD ++G EA+EKL+          +LD+ D  
Sbjct: 17  VTGGNKGIGFEICKQLSSN-GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPI 75

Query: 51  -SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH------------------ 91
            ++ +L D ++   G +D+LVNNA +A     ++ F +                      
Sbjct: 76  ATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQ 135

Query: 92  ------------TMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKK 137
                        ++ NY  +  V ++L PLL+     R+VNVSSS G L +V++E   +
Sbjct: 136 ELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALE 195

Query: 138 KLLH-EIKSVEELSALMNEFVELAQDGSHTKGGWPN--SAYAATKLGVTKLSFLQHALLS 194
            L   +  + E +  ++N  ++  ++      GWP+  +AY  +K  +   + +    + 
Sbjct: 196 ILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKI- 254

Query: 195 QDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
                    VNCV PG V T+M+ G G  T ++
Sbjct: 255 -----PKFQVNCVCPGLVKTEMNYGIGNYTAEE 282

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  135 bits (342), Expect = 2e-39
 Identities = 53/250 (21%), Positives = 93/250 (37%), Gaps = 60/250 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALE------KLQKLDILDKNSIK 53
           VTGAN+GIG G+V+ L++      I  TARD  +  E          +  L +    S+ 
Sbjct: 8   VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLD 67

Query: 54  ALHDHLEAEHG--GVDVLVNNAAIAFKVNS-SEPFGSQALHTMRTNYFALIDVCDILFPL 110
                +    G  G+ +L+NNA +     + +EP  +     +  N  +++ +   L PL
Sbjct: 68  TFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPL 127

Query: 111 LR-------------SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
           L+             S   V+ +SS  G                   S+           
Sbjct: 128 LKNAASKESGDQLSVSRAAVITISSGLG-------------------SIT---------- 158

Query: 158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
               D +     +P  AY  +K  +          L+ D   ++++V    PG+V T++ 
Sbjct: 159 ----DNTSGSAQFPVLAYRMSKAAINMFG----RTLAVDLKDDNVLVVNFCPGWVQTNLG 210

Query: 218 SGKGPLTIDQ 227
                LT++Q
Sbjct: 211 GKNAALTVEQ 220

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  123 bits (310), Expect = 1e-34
 Identities = 57/253 (22%), Positives = 97/253 (38%), Gaps = 67/253 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG--IIYLTARDASRGQEALE--------KLQKLDILDKN 50
           +TG N+G+G G+VK L+        ++ T R+  + +E  +         + ++D+ + +
Sbjct: 26  ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFD 85

Query: 51  SIKALHDHLEAEHG--GVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDIL 107
           +   L   +E      G++VL NNA IA K        SQ L  T++TN    I +    
Sbjct: 86  AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC 145

Query: 108 FPLLR-------------SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN 154
            PLL+                 ++N+SS  G                   S++       
Sbjct: 146 LPLLKKAAKANESQPMGVGRAAIINMSSILG-------------------SIQG------ 180

Query: 155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
                     +T GG    AY  +K  +   +      LS D   + ++   +HPG+V T
Sbjct: 181 ----------NTDGGMY--AYRTSKSALNAAT----KSLSVDLYPQRIMCVSLHPGWVKT 224

Query: 215 DMSSGKGPLTIDQ 227
           DM     PL +  
Sbjct: 225 DMGGSSAPLDVPT 237

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  100 bits (250), Expect = 7e-26
 Identities = 43/223 (19%), Positives = 66/223 (29%), Gaps = 37/223 (16%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
           ++G   GIG    K L      I+       +            D+      K A+ D L
Sbjct: 6   ISGCATGIGAATRKVLEAAGHQIV-GIDIRDAEVIA--------DLSTAEGRKQAIADVL 56

Query: 60  EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRV 117
                G+D LV  A +        P      + +  NYF   ++ D   P L+       
Sbjct: 57  AKCSKGMDGLVLCAGLG-------PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAA 109

Query: 118 VNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAA 177
           V +SS            L   L               E  +      H      N AYA 
Sbjct: 110 VVISSVASAHLAFDKNPLALALEA------------GEEAKARAIVEHAGEQGGNLAYAG 157

Query: 178 TKLGVTKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTDMSSG 219
           +K  +T     + A    +  +R    +N + PG   T +   
Sbjct: 158 SKNALTVAV-RKRAAAWGEAGVR----LNTIAPGATETPLLQA 195

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 95.7 bits (239), Expect = 2e-24
 Identities = 39/235 (16%), Positives = 69/235 (29%), Gaps = 70/235 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           VTGA  G+G  +  GL+++  G  + +  R   R Q+    L         D+     + 
Sbjct: 8   VTGAGSGLGRALTIGLVER--GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVD 65

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFP 109
                     G  +++++ A          P G          M +N  + I V      
Sbjct: 66  VAFAAAVEWGGLPELVLHCAGTG----EFGPVGVYTAEQIRRVMESNLVSTILVAQQTVR 121

Query: 110 LLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           L+    G + NV SS   +                                         
Sbjct: 122 LIGERGGVLANVLSSAAQV----------------------------------------- 140

Query: 169 GWPN-SAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSG 219
           G  N S Y A+K G+        +L   L    +R    +  ++P  + ++    
Sbjct: 141 GKANESLYCASKWGMRGFL---ESLRAELKDSPLR----LVNLYPSGIRSEFWDN 188

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 94.5 bits (236), Expect = 9e-24
 Identities = 51/244 (20%), Positives = 75/244 (30%), Gaps = 67/244 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           V G   G+G   V+ L++   G  + LT R+ S      E+        + DI D N I 
Sbjct: 13  VIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIA 70

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFP 109
            L        G +D+L  NA ++      EPF   +          N          L P
Sbjct: 71  VLGAAAGQTLGAIDLLHINAGVS----ELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTP 126

Query: 110 LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           L+R  G +V  SS                                             G 
Sbjct: 127 LIREGGSIVFTSSVADE----------------------------------------GGH 146

Query: 170 WPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTID 226
              S Y+A+K  +   +     L   L    IR    VN V PG+++T      G    +
Sbjct: 147 PGMSVYSASKAALVSFA---SVLAAELLPRGIR----VNSVSPGFIDTPTKGVAGITEAE 199

Query: 227 QDNI 230
           +   
Sbjct: 200 RAEF 203

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 91.8 bits (229), Expect = 7e-23
 Identities = 51/234 (21%), Positives = 80/234 (34%), Gaps = 72/234 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----KLDILDKNSIKALH 56
           VTGA  G+G  IVK L +    I+Y   R+        E       + DI+ +   +   
Sbjct: 10  VTGATGGMGIEIVKDLSRD--HIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGV 67

Query: 57  DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFPLLR 112
           D L+     VD LV+ AA+A          + ++      +  N     ++   L P LR
Sbjct: 68  DKLK-NLDHVDTLVHAAAVAR----DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALR 122

Query: 113 S-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           +  G V+ ++S  G+                                            P
Sbjct: 123 AASGCVIYINSGAGNG-----------------------------------------PHP 141

Query: 172 NSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTDMSSG 219
            +  YAA+K  +  L+         DA R++       V+ V PG  NT M  G
Sbjct: 142 GNTIYAASKHALRGLA---------DAFRKEEANNGIRVSTVSPGPTNTPMLQG 186

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 92.6 bits (231), Expect = 7e-23
 Identities = 48/243 (19%), Positives = 73/243 (30%), Gaps = 69/243 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           +TGA  GIG    K  + +  G  +++T R       A+ ++       + D  +   + 
Sbjct: 34  ITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELD 91

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFP 109
            L++ ++AE G +DVL  NA       S  P G         T   N   ++       P
Sbjct: 92  RLYEKVKAEAGRIDVLFVNAGGG----SMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALP 147

Query: 110 LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           LL     VV   S+ G                                           G
Sbjct: 148 LLARGSSVVLTGSTAGST-----------------------------------------G 166

Query: 170 WPN-SAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTI 225
            P  S YAA+K  +   +         L    IR    +N + PG   T           
Sbjct: 167 TPAFSVYAASKAALRSFA---RNWILDLKDRGIR----INTLSPGPTETTGLVELAGKDP 219

Query: 226 DQD 228
            Q 
Sbjct: 220 VQQ 222

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 90.8 bits (226), Expect = 3e-22
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 81/244 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           +TGA  GIG        +      + L   +    +E   K +          +D  ++ 
Sbjct: 36  ITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE 93

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH----TMRTNYFALIDVCDI 106
            I +    ++AE G V +LVNNA +      +    +        T   N  A       
Sbjct: 94  DIYSSAKKVKAEIGDVSILVNNAGVV----YTSDLFATQDPQIEKTFEVNVLAHFWTTKA 149

Query: 107 LFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             P +   +HG +V V+S+ GH+                                     
Sbjct: 150 FLPAMTKNNHGHIVTVASAAGHV------------------------------------- 172

Query: 165 HTKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLV--------VNCVHPGYVNTD 215
                 P   AY ++K                  + ++L           C+ P +VNT 
Sbjct: 173 ----SVPFLLAYCSSKFAAVGFH---------KTLTDELAALQITGVKTTCLCPNFVNTG 219

Query: 216 MSSG 219
               
Sbjct: 220 FIKN 223

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 90.4 bits (225), Expect = 3e-22
 Identities = 49/225 (21%), Positives = 80/225 (35%), Gaps = 55/225 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           VTG ++GIG  IV  L     D ++Y  AR  +  ++  EK          DI + + +K
Sbjct: 7   VTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLK 66

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDILFPLLR 112
            L +     HG +D LV NA +   V +       A       N+F+++ +  I  P L+
Sbjct: 67  QLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELK 126

Query: 113 -SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
            ++G VV VSS   +                                             
Sbjct: 127 KTNGNVVFVSSDACN----------------------------------------MYFSS 146

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             AY ++K  +   +        +  ++       V PG V+TDM
Sbjct: 147 WGAYGSSKAALNHFA--MTLANEERQVK----AIAVAPGIVDTDM 185

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 89.1 bits (222), Expect = 1e-21
 Identities = 56/239 (23%), Positives = 87/239 (36%), Gaps = 73/239 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL---------DILDKN 50
           VTG +KGIGY IV+ L     G  +Y  +R+     E LE  ++          D+L + 
Sbjct: 26  VTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRT 83

Query: 51  SIKALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
               L   +     G +++LVNNA +     + +         M TN+ A   +  I +P
Sbjct: 84  ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 143

Query: 110 LL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
           LL    +G V+ +SS  G                                          
Sbjct: 144 LLKASQNGNVIFLSSIAGFS---------------------------------------- 163

Query: 168 GGWPN-SAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSG 219
              P+ S Y+A+K  +   TK      +L    ++D IR    VN V PG + T +   
Sbjct: 164 -ALPSVSLYSASKGAINQMTK------SLACEWAKDNIR----VNSVAPGVILTPLVET 211

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 87.9 bits (219), Expect = 3e-21
 Identities = 52/236 (22%), Positives = 83/236 (35%), Gaps = 71/236 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL---------DILDKN 50
           VTG ++GIGYGIV+ L     G  +Y  +R+     + L + +           D+  ++
Sbjct: 14  VTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRS 71

Query: 51  SIKALHDHLEAE-HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
             + L + +    HG +++LVNNA I     + +         M  N+ A   +  +  P
Sbjct: 72  ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 131

Query: 110 LL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
            L     G VV +SS  G L                                        
Sbjct: 132 FLKASERGNVVFISSVSGAL---------------------------------------- 151

Query: 168 GGWPNSAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMS 217
                + Y ATK  +   T+       L    ++D IR    VN V PG + T + 
Sbjct: 152 AVPYEAVYGATKGAMDQLTR------CLAFEWAKDNIR----VNGVGPGVIATSLV 197

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 88.1 bits (219), Expect = 4e-21
 Identities = 42/237 (17%), Positives = 79/237 (33%), Gaps = 72/237 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL----------DILDK 49
           VTGA+KGIG  +   L +   G  + +TAR     Q+ +    +L           + D 
Sbjct: 33  VTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 90

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
              +          GG+D+L+ N      +N           +M  N+ + + +     P
Sbjct: 91  TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALP 150

Query: 110 LL-RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           +L +S+G +V VSS  G +                                         
Sbjct: 151 MLKQSNGSIVVVSSLAGKV----------------------------------------- 169

Query: 169 GWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLV-------VNCVHPGYVNTDMS 217
            +P  +AY+A+K  +              +IR++         +     G ++T+ +
Sbjct: 170 AYPMVAAYSASKFALDGFF---------SSIRKEYSVSRVNVSITLCVLGLIDTETA 217

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 87.6 bits (218), Expect = 5e-21
 Identities = 47/242 (19%), Positives = 81/242 (33%), Gaps = 69/242 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL------------DIL 47
           +TG++ GIG        ++  G  + +T R A R +E  +++               D+ 
Sbjct: 11  ITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDV 103
                  +      + G +D+LVNNA  A   + S+   +Q++     T+  N  ++I +
Sbjct: 69  TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIAL 128

Query: 104 CDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
                P L  + G +VN+SS    L                                   
Sbjct: 129 TKKAVPHLSSTKGEIVNISSIASGL----------------------------------- 153

Query: 163 GSHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                       Y+  K  +   T+ + +      Q  IR    VN + PG V T   S 
Sbjct: 154 ----HATPDFPYYSIAKAAIDQYTRNTAIDLI---QHGIR----VNSISPGLVATGFGSA 202

Query: 220 KG 221
            G
Sbjct: 203 MG 204

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 86.0 bits (214), Expect = 1e-20
 Identities = 51/237 (21%), Positives = 74/237 (31%), Gaps = 74/237 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK-----LDILDKNSIKA 54
           +TGA++GIG    + L  +  G  + L ARD  R Q    +L+       D+ ++     
Sbjct: 10  ITGASRGIGEATARLLHAK--GYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWAR 67

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL---HTM-RTNYFALIDVCDILFPL 110
               +E   G +  LVNNA +       +P     L     +  TN            P 
Sbjct: 68  AVAAMEEAFGELSALVNNAGVGV----MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPA 123

Query: 111 L--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           L  R  G +VNV S  G                                           
Sbjct: 124 LLRRGGGTIVNVGSLAGK-----------------------------------------N 142

Query: 169 GWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTDMSSG 219
            +   A Y A+K G+  L+          A   DL      V  V PG V+T  +  
Sbjct: 143 PFKGGAAYNASKFGLLGLA---------GAAMLDLREANVRVVNVLPGSVDTGFAGN 190

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 85.7 bits (213), Expect = 2e-20
 Identities = 48/234 (20%), Positives = 81/234 (34%), Gaps = 69/234 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL----------DILDK 49
           +TG++ GIG  I +G  ++  G  I L AR   R  EA   L++           D+   
Sbjct: 12  ITGSSSGIGLAIAEGFAKE--GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP 69

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQA-LHTMRTNYFALIDVCDILF 108
             + A+ + + +  GG D+LVNNA       +      +           A + +   L 
Sbjct: 70  EGVDAVVESVRSSFGGADILVNNAGT-GSNETIMEAADEKWQFYWELLVMAAVRLARGLV 128

Query: 109 PLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
           P +  R  G +++ +S C                                          
Sbjct: 129 PGMRARGGGAIIHNASICAV---------------------------------------- 148

Query: 167 KGGWPNSAYAATK---LGVTK-LSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           +  W    Y  TK   +  +K L+      + +D IR    VNC++PG + T  
Sbjct: 149 QPLWYEPIYNVTKAALMMFSKTLA----TEVIKDNIR----VNCINPGLILTPD 194

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 84.5 bits (210), Expect = 2e-20
 Identities = 37/229 (16%), Positives = 65/229 (28%), Gaps = 75/229 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----KLDILDKNSIKAL 55
           +TGA  G+G        +   G  + L+ R A    E   ++       D+ D+   KAL
Sbjct: 5   ITGATGGLGGAFA----RALKGHDLLLSGRRAGALAELAREVGARALPADLADELEAKAL 60

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL--RS 113
                 E G +D+LV+    A + +  E         +  +      V          + 
Sbjct: 61  ----LEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFV----LKHARFQK 112

Query: 114 HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN- 172
             R V   +   ++                                           P  
Sbjct: 113 GARAVFFGAYPRYV-----------------------------------------QVPGF 131

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTDM 216
           +AYAA K  +             +A R++L+     +  V    V T +
Sbjct: 132 AAYAAAKGALEAYL---------EAARKELLREGVHLVLVRLPAVATGL 171

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 85.4 bits (212), Expect = 2e-20
 Identities = 29/227 (12%), Positives = 57/227 (25%), Gaps = 55/227 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHL 59
           V G +  +G  +VK    +             +   +       +    +  IK++ + +
Sbjct: 27  VLGGSGALGAEVVKFFKSK--SWNTISIDFRENPNADHS---FTIKDSGEEEIKSVIEKI 81

Query: 60  EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPLLRSHGRVV 118
            ++   VD  V  A      N+S     +++   +  N ++      I   LL   G  V
Sbjct: 82  NSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFV 141

Query: 119 NVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAAT 178
              +S                                                  AY AT
Sbjct: 142 LTGASAAL----------------------------------------NRTSGMIAYGAT 161

Query: 179 KLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
           K       K    ++  L             + P  ++T  +     
Sbjct: 162 KAATHHIIKDLASENGGLPAG-ST----SLGILPVTLDTPTNRKYMS 203

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 85.3 bits (212), Expect = 2e-20
 Identities = 47/244 (19%), Positives = 83/244 (34%), Gaps = 84/244 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------------KLDILD 48
           +TGA++GIG  I  GL      ++ L AR     ++  +++              LDI D
Sbjct: 12  ITGASQGIGAVIAAGLATDGYRVV-LIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT------MRTNYFALID 102
                     +  ++G VD+LVN AA+          GS +         M  N  A   
Sbjct: 71  CTKADTEIKDIHQKYGAVDILVNAAAMF-------MDGSLSEPVDNFRKIMEINVIAQYG 123

Query: 103 VCDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
           +   +  ++  + +G + NV+S                                      
Sbjct: 124 ILKTVTEIMKVQKNGYIFNVASRAAKY--------------------------------- 150

Query: 161 QDGSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNT 214
                   G+ +   Y +TK  +  L+         +++  +L      V  + PG+VNT
Sbjct: 151 --------GFADGGIYGSTKFALLGLA---------ESLYRELAPLGIRVTTLCPGWVNT 193

Query: 215 DMSS 218
           DM+ 
Sbjct: 194 DMAK 197

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 84.9 bits (211), Expect = 5e-20
 Identities = 50/235 (21%), Positives = 82/235 (34%), Gaps = 62/235 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL--------DILDKNS 51
           VTG ++GIG  I +GL++   G  +++ ARDA    +   +L           D+  +  
Sbjct: 34  VTGGSRGIGQMIAQGLLEA--GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAG 91

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFPL 110
            + L   L      +D+LVNNA  +    + E +        M+ N  ++      L PL
Sbjct: 92  ARRLAQALGELSARLDILVNNAGTS-WGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPL 150

Query: 111 LRSH------GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
           LR         RV+N+ S  G                                       
Sbjct: 151 LRRSASAENPARVINIGSVAG--------------------------------------- 171

Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
            +  G    AY  +K  + +LS +    L  + I     VN + PG   + M+  
Sbjct: 172 ISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHIN----VNVIAPGRFPSRMTRH 222

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 84.5 bits (210), Expect = 5e-20
 Identities = 52/249 (20%), Positives = 85/249 (34%), Gaps = 81/249 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           +TG  +G+G    +  +    G  + L       G     +L      Q LD+  +   +
Sbjct: 10  ITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQ 67

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------C 104
            +  +   E G VD LVNNA I+             L T     F  ++++         
Sbjct: 68  RVVAYAREEFGSVDGLVNNAGIS---------TGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 105 DILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
             + P ++    G +VN+SS+ G +                                   
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLM----------------------------------- 143

Query: 163 GSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
                 G    S+Y A+K GV   +KL+ ++      D IR    VN VHPG   T M++
Sbjct: 144 ------GLALTSSYGASKWGVRGLSKLAAVELG---TDRIR----VNSVHPGMTYTPMTA 190

Query: 219 GKGPLTIDQ 227
             G    + 
Sbjct: 191 ETGIRQGEG 199

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 84.3 bits (209), Expect = 8e-20
 Identities = 41/242 (16%), Positives = 72/242 (29%), Gaps = 72/242 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG--IIYLTARDASRGQEALEKLQK-----------LDIL 47
           +TGA++G G  +   L +      ++ ++AR  S  ++  E+L              D+ 
Sbjct: 11  LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG 70

Query: 48  DKNSIKALHDHLEA----EHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFA 99
            +  ++ L   +      E     +L+NNAA    V S        L    +    N  +
Sbjct: 71  TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDV-SKGFLNVNDLAEVNNYWALNLTS 129

Query: 100 LIDVCDILFPLLR----SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE 155
           ++ +        +        VVN+SS C                               
Sbjct: 130 MLCLTSGTLNAFQDSPGLSKTVVNISSLCAL----------------------------- 160

Query: 156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
                        GW    Y A K         Q     + ++R    V    PG ++ D
Sbjct: 161 ---------QPYKGW--GLYCAGKAAR--DMLYQVLAAEEPSVR----VLSYAPGPLDND 203

Query: 216 MS 217
           M 
Sbjct: 204 MQ 205

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 83.7 bits (208), Expect = 8e-20
 Identities = 53/241 (21%), Positives = 88/241 (36%), Gaps = 82/241 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ--------KLDILDKNS 51
           +TG   GIG  I    +++  G  + +T R +  G++A + +         + D  D++ 
Sbjct: 11  ITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDG 68

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------- 103
              L D  E   G V  LVNNA IA          ++++    T  +  L+ V       
Sbjct: 69  WTKLFDATEKAFGPVSTLVNNAGIA---------VNKSVEETTTAEWRKLLAVNLDGVFF 119

Query: 104 -CDILFPLLRSHGR---VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
              +    +++ G    ++N+SS  G +                                
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFV-------------------------------- 147

Query: 160 AQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
                    G P+  AY A+K  V   +K + L  A L    +R    VN VHPGY+ T 
Sbjct: 148 ---------GDPSLGAYNASKGAVRIMSKSAALDCA-LKDYDVR----VNTVHPGYIKTP 193

Query: 216 M 216
           +
Sbjct: 194 L 194

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 84.2 bits (209), Expect = 1e-19
 Identities = 51/232 (21%), Positives = 77/232 (33%), Gaps = 65/232 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTGA+ G G  I +  +   D  +  TAR      + +           LD+ D   I  
Sbjct: 10  VTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDV 68

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS- 113
           +   + A +G VDVLVNNA         E    +       + F    +   L P +R  
Sbjct: 69  VAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER 128

Query: 114 -HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP- 171
             G VVN+SS  G L                                          +  
Sbjct: 129 GSGSVVNISSFGGQL-----------------------------------------SFAG 147

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTDMSS 218
            SAY+ATK  + +LS         + + +++      V  V PG   T++  
Sbjct: 148 FSAYSATKAALEQLS---------EGLADEVAPFGIKVLIVEPGAFRTNLFG 190

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 83.8 bits (208), Expect = 1e-19
 Identities = 45/237 (18%), Positives = 74/237 (31%), Gaps = 74/237 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ-----------KLDILD 48
           VTG + GIG   V+ L++   G  +   ARD  R + A   L+             D+LD
Sbjct: 13  VTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVC 104
              ++A  +  E   G   +LVNNA           F           ++  +F++I   
Sbjct: 71  ALQVRAFAEACERTLGCASILVNNAGQG----RVSTFAETTDEAWSEELQLKFFSVIHPV 126

Query: 105 DILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
               P L  R+   +V V+S                                        
Sbjct: 127 RAFLPQLESRADAAIVCVNSLLAS------------------------------------ 150

Query: 163 GSHTKGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
               +      A +A + GV  L     ++    +   +R    VN +  G V +  
Sbjct: 151 ----QPEPHMVATSAARAGVKNLV---RSMAFEFAPKGVR----VNGILIGLVESGQ 196

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 83.3 bits (207), Expect = 1e-19
 Identities = 58/233 (24%), Positives = 81/233 (34%), Gaps = 75/233 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQK-----LDILDKNSIKA 54
           VTGA KGIG G V+ L     G  +   +R  +     + +        +D+ D  + + 
Sbjct: 12  VTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER 69

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFPL 110
                    G VD+LVNNAA+A      +PF          +   N  A+I V  I+   
Sbjct: 70  A----LGSVGPVDLLVNNAAVALL----QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG 121

Query: 111 LRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
           L +    G +VNVSS C                                           
Sbjct: 122 LIARGVPGAIVNVSSQCSQR---------------------------------------- 141

Query: 168 GGWPNSAYAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTDM 216
               +S Y +TK  +   TK+     AL L    IR    VN V+P  V T M
Sbjct: 142 AVTNHSVYCSTKGALDMLTKVM----ALELGPHKIR----VNAVNPTVVMTSM 186

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 83.0 bits (206), Expect = 2e-19
 Identities = 46/238 (19%), Positives = 71/238 (29%), Gaps = 73/238 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQK------------LDIL 47
           VTGA +GIG    +       G  + L  R  +   E  ++++             L+  
Sbjct: 19  VTGAARGIGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENA 76

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDV 103
                + L   +E E G +D L++NA+I     +  P            M  N  A   +
Sbjct: 77  TAQQYRELAARVEHEFGRLDGLLHNASI-IGPRT--PLEQLPDEDFMQVMHVNVNATFML 133

Query: 104 CDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQ 161
              L PLL+      +   SSS G                                    
Sbjct: 134 TRALLPLLKRSEDASIAFTSSSVGRKG--------------------------------- 160

Query: 162 DGSHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                +  W   AY  +K       +   L   L    A+R     N ++PG   T M
Sbjct: 161 -----RANW--GAYGVSKFATEGLMQT--LADELEGVTAVR----ANSINPGATRTGM 205

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 83.3 bits (207), Expect = 2e-19
 Identities = 49/240 (20%), Positives = 78/240 (32%), Gaps = 79/240 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTG  KGIG+ IV+       G +I+  AR+     E L K Q           D   + 
Sbjct: 19  VTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP 76

Query: 51  SIKALHDHLEAEHGG-VDVLVNNAAIAFKVN----SSEPFGSQALHTMRTNYFALIDVCD 105
             + L   + +  GG +D+L+NN            ++E F       + TN  +   +  
Sbjct: 77  EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSF----HISTNLESAYHLSQ 132

Query: 106 ILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
           +  PLL     G ++ +SS  G +                                    
Sbjct: 133 LAHPLLKASGCGNIIFMSSIAGVV------------------------------------ 156

Query: 164 SHTKGGWPNSAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMS 217
                    S Y+ATK  +    +       L    + D IR     N V P  + T ++
Sbjct: 157 ----SASVGSIYSATKGALNQLAR------NLACEWASDGIR----ANAVAPAVIATPLA 202

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 82.6 bits (205), Expect = 2e-19
 Identities = 45/224 (20%), Positives = 72/224 (32%), Gaps = 63/224 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG +KGIG  +V+ L+Q  +  +       S   E L+ ++  D+  +  I  + D   
Sbjct: 9   VTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIK-ADLTKQQDITNVLD--I 65

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFPLLRSHGR 116
            ++   D +  NA I              +      +  N ++ I     L   L+    
Sbjct: 66  IKNVSFDGIFLNAGIL----IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGAS 121

Query: 117 VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN-SAY 175
           +V   S    +                                           PN  AY
Sbjct: 122 IVFNGSDQCFI-----------------------------------------AKPNSFAY 140

Query: 176 AATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             +K  +   TK   L  A   +  IR    VN V PG V+TD+
Sbjct: 141 TLSKGAIAQMTKSLALDLA---KYQIR----VNTVCPGTVDTDL 177

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 83.0 bits (206), Expect = 2e-19
 Identities = 41/231 (17%), Positives = 70/231 (30%), Gaps = 64/231 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL---------DILDKN 50
           ++G    +G  + +   +Q  G  + L AR   R ++  +++            DI D  
Sbjct: 16  ISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDA 73

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFP 109
            +  L D     +G VDV++NNA     +        + +   +    F  + +     P
Sbjct: 74  QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP 133

Query: 110 LLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
            L  S G VVNV+S                                              
Sbjct: 134 ALEESKGAVVNVNSMVVR----------------------------------------HS 153

Query: 169 GWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                AY   K  +   ++    +     +  IR    VN V PGY+    
Sbjct: 154 QAKYGAYKMAKSALLAMSQTLATELG---EKGIR----VNSVLPGYIWGGT 197

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 82.5 bits (205), Expect = 3e-19
 Identities = 47/235 (20%), Positives = 81/235 (34%), Gaps = 71/235 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG+ +G+G+   +GL      +I L    A+   E+++ L +          D+ D+ +
Sbjct: 14  VTGSARGLGFAYAEGLAAAGARVI-LNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELA 72

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFPL 110
           I+A    L+AE   VD+L+NNA I            +     + TN  +   V       
Sbjct: 73  IEAAFSKLDAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKR 131

Query: 111 L---RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
           +    S G+++N+ S                                             
Sbjct: 132 MIARNSGGKIINIGSLTSQA---------------------------------------- 151

Query: 168 GGWPNSAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
                + Y A K G+   T       ++    +Q  I+     N + PGY+ TDM
Sbjct: 152 ARPTVAPYTAAKGGIKMLTC------SMAAEWAQFNIQ----TNAIGPGYILTDM 196

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 81.4 bits (202), Expect = 7e-19
 Identities = 52/227 (22%), Positives = 78/227 (34%), Gaps = 60/227 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL-----QKLDILDKNSIKA 54
           VTG  +GIG GIV+  +    G  + +  +D S G+   ++L        D+  ++ +K 
Sbjct: 14  VTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKT 71

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPLLR- 112
           L        G +D +VNNA         E   +Q     +  N      +  +  P LR 
Sbjct: 72  LVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 131

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
           S G V+N+SS  G                                          G    
Sbjct: 132 SQGNVINISSLVGA----------------------------------------IGQAQA 151

Query: 173 SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             Y ATK  V   TK   L  +      +R    VNC+ PG + T +
Sbjct: 152 VPYVATKGAVTAMTKALALDES---PYGVR----VNCISPGNIWTPL 191

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 81.0 bits (201), Expect = 9e-19
 Identities = 53/235 (22%), Positives = 77/235 (32%), Gaps = 79/235 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQK-----LDILDKNSIKA 54
           VTGA KGIG   VK L     G  +    R  S      ++        +D+ D ++ + 
Sbjct: 12  VTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK 69

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFPL 110
                    G VD+LVNNAA+       +PF          +   N  ++  V  ++   
Sbjct: 70  A----LGGIGPVDLLVNNAALVIM----QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARD 121

Query: 111 LR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
           +      G +VNVSS   H+                                        
Sbjct: 122 MINRGVPGSIVNVSSMVAHV---------------------------------------- 141

Query: 168 GGWPNSAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
                  Y++TK  +   TK      A+   L    IR    VN V+P  V TDM
Sbjct: 142 TFPNLITYSSTKGAMTMLTK------AMAMELGPHKIR----VNSVNPTVVLTDM 186

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 80.6 bits (200), Expect = 1e-18
 Identities = 44/238 (18%), Positives = 77/238 (32%), Gaps = 73/238 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTG  + IG   V  L +   G  + +   D +   +A+E L+          +D+ +  
Sbjct: 18  VTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTE 75

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTN----YFALIDVCD 105
           S++     +  + G VD+LV  A I      +E          +  N    + +   V  
Sbjct: 76  SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR 135

Query: 106 ILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
           I+  L +  G +V + S  G +                                      
Sbjct: 136 IM--LEQKQGVIVAIGSMSGLI-------------------------------------- 155

Query: 166 TKGGWPNSAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMS 217
                  +AY A+K GV    +      +L    +   IR     N V P Y+ T ++
Sbjct: 156 VNRPQQQAAYNASKAGVHQYIR------SLAAEWAPHGIR----ANAVAPTYIETTLT 203

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 81.7 bits (202), Expect = 1e-18
 Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 31/148 (20%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ----EALEKLQK----------LDI 46
           +TGA+ G G    + L       +Y + RD         EA+    +          LD+
Sbjct: 10  ITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDV 68

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS-------QALHTMRTNYFA 99
             + S+    D +  E G +DVL++NA           FG        Q       N  +
Sbjct: 69  QSQVSVDRAIDQIIGEDGRIDVLIHNAGHMV-------FGPAEAFTPEQFAELYDINVLS 121

Query: 100 LIDVCDILFPLLRS--HGRVVNVSSSCG 125
              V     P +R   HG ++ +SSS  
Sbjct: 122 TQRVNRAALPHMRRQKHGLLIWISSSSS 149

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 81.1 bits (201), Expect = 1e-18
 Identities = 44/238 (18%), Positives = 76/238 (31%), Gaps = 68/238 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL------------DIL 47
           VTG   GIG G+  GL+    G  + +  R+  +   A+++L+ L            DI 
Sbjct: 16  VTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDI 106
           +++      D + A HG +  +V+ A  +  +       S+A   T+  N    + V   
Sbjct: 74  NEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKH 133

Query: 107 LFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
               +     G  V +SS                                          
Sbjct: 134 AAREMVRGGGGSFVGISSIAASN------------------------------------- 156

Query: 165 HTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                    AY  TK  V    +L+  +        +R    VN + PG + TD+ + 
Sbjct: 157 ---THRWFGAYGVTKSAVDHLMQLAADELG---ASWVR----VNSIRPGLIRTDLVAA 204

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 80.7 bits (200), Expect = 1e-18
 Identities = 43/236 (18%), Positives = 71/236 (30%), Gaps = 67/236 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL---------DILDKN 50
           VTGA++GIG GI   L +   G  +Y+T R     +   ++ Q L         D   ++
Sbjct: 10  VTGASRGIGRGIALQLCKA--GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQES 67

Query: 51  SIKALHDHLEAE-HGGVDVLVNNAAIAFKVNSSEPFG-------SQALHTMRTNYFALID 102
            +++L + ++ E  G +DVLVNNA    +   +           S               
Sbjct: 68  EVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYF 127

Query: 103 VCDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
                  L+     G +V +SS                                      
Sbjct: 128 CSVYGARLMVPAGQGLIVVISSPGSL---------------------------------- 153

Query: 161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                      N  Y   K    KL+      L +  +        + PG V T++
Sbjct: 154 -------QYMFNVPYGVGKAACDKLAADCAHELRRHGVS----CVSLWPGIVQTEL 198

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 80.6 bits (200), Expect = 2e-18
 Identities = 48/240 (20%), Positives = 74/240 (30%), Gaps = 79/240 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           V+G  +G+G   V+ ++ +  G  +         G+    +L        LD+      K
Sbjct: 12  VSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWK 69

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------C 104
           A  D      GG+ VLVNNA I              +       +  ++DV         
Sbjct: 70  AAVDTAVTAFGGLHVLVNNAGIL---------NIGTIEDYALTEWQRILDVNLTGVFLGI 120

Query: 105 DILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
             +   ++    G ++N+SS  G                                     
Sbjct: 121 RAVVKPMKEAGRGSIINISSIEGLA----------------------------------- 145

Query: 163 GSHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                G      Y ATK  V   TK + L+        IR    VN +HPG V T M+  
Sbjct: 146 -----GTVACHGYTATKFAVRGLTKSTALELG---PSGIR----VNSIHPGLVKTPMTDW 193

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 45/237 (18%), Positives = 81/237 (34%), Gaps = 71/237 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL------------DIL 47
           +TG++ GIG        ++  G  + +T R+  R +E  +++ K             D+ 
Sbjct: 31  ITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDV 103
           + +    + +   A+ G +D+LVNNA              Q +     T + N+ A+I++
Sbjct: 89  EASGQDDIINTTLAKFGKIDILVNNAGANL--ADGTANTDQPVELYQKTFKLNFQAVIEM 146

Query: 104 CDILFP-LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
                  L+++ G +VNVSS                                        
Sbjct: 147 TQKTKEHLIKTKGEIVNVSSIVAGP----------------------------------- 171

Query: 163 GSHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               +       YA  K  +   T+ + +      Q  +R    VN V PG V T  
Sbjct: 172 ----QAHSGYPYYACAKAALDQYTRCTAIDLI---QHGVR----VNSVSPGAVATGF 217

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 53/243 (21%), Positives = 90/243 (37%), Gaps = 80/243 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI--IYLTARDASRGQEALEKLQK--------------- 43
           +TGA+ GIG       ++  +G   + L AR   +    LE+L+K               
Sbjct: 38  ITGASAGIGKATALEYLEASNGDMKLILAARRLEK----LEELKKTIDQEFPNAKVHVAQ 93

Query: 44  LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTNYFALID 102
           LDI     IK   ++L  E   +D+LVNNA  A   +      ++ +  +  TN  ALI+
Sbjct: 94  LDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALIN 153

Query: 103 VCDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
           +   + P+   ++ G +VN+ S  G                                   
Sbjct: 154 ITQAVLPIFQAKNSGDIVNLGSIAGR---------------------------------- 179

Query: 161 QDGSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNT 214
                    +P  + Y A+K  V   +         D++R++L+     V  + PG V T
Sbjct: 180 -------DAYPTGSIYCASKFAVGAFT---------DSLRKELINTKIRVILIAPGLVET 223

Query: 215 DMS 217
           + S
Sbjct: 224 EFS 226

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 79.6 bits (197), Expect = 3e-18
 Identities = 43/223 (19%), Positives = 75/223 (33%), Gaps = 39/223 (17%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           +TG+  GIG  + + L +    +I    R  +  +  L      +        A+   L+
Sbjct: 6   ITGSASGIGAALKELLARAGHTVI-GIDRGQADIEADLSTPGGRET-------AVAAVLD 57

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVV 118
              G +D LV  A +      +          +  NYF +  + D L   L        V
Sbjct: 58  RCGGVLDGLVCCAGVG----VTAANSGL---VVAVNYFGVSALLDGLAEALSRGQQPAAV 110

Query: 119 NVSS-SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAA 177
            V S +           ++  L  +     EL+                  G  + AYA 
Sbjct: 111 IVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQ---------------QGQTHLAYAG 155

Query: 178 TKLGVTKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTDMSSG 219
           +K  VT L+  ++ +  +   +R    +N V PG V T +   
Sbjct: 156 SKYAVTCLA-RRNVVDWAGRGVR----LNVVAPGAVETPLLQA 193

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 79.5 bits (197), Expect = 4e-18
 Identities = 50/238 (21%), Positives = 76/238 (31%), Gaps = 76/238 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----------KLDILDK 49
           +TGA KGIG  I +       G  + L+ RD S    A   L            +D+ + 
Sbjct: 25  ITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEP 82

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCD 105
           ++   L        GG+DVLVNNA I    +  +P           T+  N  A   +  
Sbjct: 83  DAPAELARRAAEAFGGLDVLVNNAGI----SHPQPVVDTDPQLFDATIAVNLRAPALLAS 138

Query: 106 ILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
            +   + +    G ++ V+S+                                       
Sbjct: 139 AVGKAMVAAGEGGAIITVASAAALA----------------------------------- 163

Query: 163 GSHTKGGWPNSAYAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTDM 216
                    + AY  +K G+   TK+     A  L    IR     N V P  V T+M
Sbjct: 164 -----PLPDHYAYCTSKAGLVMATKVL----ARELGPHGIR----ANSVCPTVVLTEM 208

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 79.9 bits (198), Expect = 4e-18
 Identities = 47/243 (19%), Positives = 77/243 (31%), Gaps = 77/243 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           +TGA  GIG    + L +   G  + L     +    A   +        +D+ ++ S++
Sbjct: 16  ITGACGGIGLETSRVLARA--GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVR 73

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------C 104
           AL D      G +D++ NNAA +             +  M  + +     V        C
Sbjct: 74  ALIDFTIDTFGRLDIVDNNAAHS-------DPADMLVTQMTVDVWDDTFTVNARGTMLMC 126

Query: 105 DILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
               P L S   G +VN+SS+  H                                    
Sbjct: 127 KYAIPRLISAGGGAIVNISSATAHA----------------------------------- 151

Query: 163 GSHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                    ++AYA TK  +   T+    Q+    +  +R     N + PG V T     
Sbjct: 152 -----AYDMSTAYACTKAAIETLTRYVATQYG---RHGVR----CNAIAPGLVRTPRLEV 199

Query: 220 KGP 222
             P
Sbjct: 200 GLP 202

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 79.5 bits (197), Expect = 4e-18
 Identities = 36/235 (15%), Positives = 74/235 (31%), Gaps = 63/235 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL---------DILDKN 50
           VTG++ GIG+ + +   Q   G  + +        ++A    +           +I D  
Sbjct: 39  VTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPK 96

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQA--LHTMRTNYFALIDVCDILF 108
           S++      E + G +DV V NA + +         +       +  +   +      + 
Sbjct: 97  SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIG 156

Query: 109 PLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
            + +    G ++  SS  G + ++                                    
Sbjct: 157 KIFKKNGKGSLIITSSISGKIVNI------------------------------------ 180

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQ--DAIREDLVVNCVHPGYVNTDMSSG 219
                 + Y   K   T L+    +L  +     R    VN + PGY++TD++  
Sbjct: 181 --PQLQAPYNTAKAACTHLA---KSLAIEWAPFAR----VNTISPGYIDTDITDF 226

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 80.2 bits (198), Expect = 5e-18
 Identities = 45/241 (18%), Positives = 75/241 (31%), Gaps = 76/241 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL-----------QKLDILD 48
           VTG   G+G G+V+ L+ Q  G  + +         +AL  L            +LD+  
Sbjct: 13  VTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH----TMRTNYFALIDVC 104
           +   K   D +EA  G V +L NNA +       +P    +       +  N   +++  
Sbjct: 71  REGFKMAADEVEARFGPVSILCNNAGVN----LFQPIEESSYDDWDWLLGVNLHGVVNGV 126

Query: 105 DILFPLLRSH--------GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF 156
               P +           G VVN +S    L                             
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTASMAAFL----------------------------- 157

Query: 157 VELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
                          +   Y  TK  V  LS      L    ++ ++ V+ + PG V + 
Sbjct: 158 ------------AAGSPGIYNTTKFAVRGLS----ESLHYSLLKYEIGVSVLCPGLVKSY 201

Query: 216 M 216
           +
Sbjct: 202 I 202

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 79.1 bits (196), Expect = 5e-18
 Identities = 51/248 (20%), Positives = 80/248 (32%), Gaps = 100/248 (40%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ------KLDILDKNSIK 53
           VTG +KGIG  I + L +   G  + +   D    Q  +  L+      ++D+  + S+ 
Sbjct: 17  VTGGSKGIGAAIARALDKA--GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVD 74

Query: 54  ALHDHLEAEHGGVDVLVNNAAIA----------------FKVNSSEPF-GSQA-LHTMRT 95
           A         GG D+L  NA ++                F VN+   F  +Q        
Sbjct: 75  AAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLA 134

Query: 96  NYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE 155
           +                + G +VN +S    +                            
Sbjct: 135 S---------------NTKGVIVNTASLAAKV---------------------------- 151

Query: 156 FVELAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVH 208
                        G P  + Y+A+K  V   T+      AL   ++   IR    VNCV 
Sbjct: 152 -------------GAPLLAHYSASKFAVFGWTQ------ALAREMAPKNIR----VNCVC 188

Query: 209 PGYVNTDM 216
           PG+V T M
Sbjct: 189 PGFVKTAM 196

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 79.6 bits (197), Expect = 6e-18
 Identities = 49/248 (19%), Positives = 87/248 (35%), Gaps = 86/248 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ-----------KLDILD 48
           VTGA+ GIG  + + L+QQ  G  +   AR     +E   + +           + D+ +
Sbjct: 37  VTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMR----TNYFALIDVC 104
           +  I ++   + ++H GVD+ +NNA +A      +   S +    +     N  AL    
Sbjct: 95  EEDILSMFSAIRSQHSGVDICINNAGLA----RPDTLLSGSTSGWKDMFNVNVLALSICT 150

Query: 105 DILFPLLR----SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
              +  ++      G ++N++S  GH                                  
Sbjct: 151 REAYQSMKERNVDDGHIININSMSGH---------------------------------- 176

Query: 161 QDGSHTKGGWPNSA---YAATKLGVTKLSFLQHALLSQDAIREDLV-------VNCVHPG 210
                     P S    Y+ATK  VT L+         + +R++L          C+ PG
Sbjct: 177 -------RVLPLSVTHFYSATKYAVTALT---------EGLRQELREAQTHIRATCISPG 220

Query: 211 YVNTDMSS 218
            V T  + 
Sbjct: 221 VVETQFAF 228

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 78.8 bits (195), Expect = 6e-18
 Identities = 46/251 (18%), Positives = 79/251 (31%), Gaps = 91/251 (36%)

Query: 1   VTGANKGIGYGIVKGLIQQ------FDGIIYLTARDASRGQEALEKLQ---------KLD 45
           +TGA KGIG  I     +       F+ ++ L++R A+  ++   + +           D
Sbjct: 7   ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITAD 66

Query: 46  ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV- 103
           I D   ++ L  H+   +G +D LVNNA +         FG  AL  +    F   ++  
Sbjct: 67  ISDMADVRRLTTHIVERYGHIDCLVNNAGVG-------RFG--ALSDLTEEDFDYTMNTN 117

Query: 104 -------CDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN 154
                     LF L+  +  G +  ++S                                
Sbjct: 118 LKGTFFLTQALFALMERQHSGHIFFITSVAATK--------------------------- 150

Query: 155 EFVELAQDGSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVH 208
                          + +S+ Y  +K G   L          + +R         +  V 
Sbjct: 151 --------------AFRHSSIYCMSKFGQRGLV---------ETMRLYARKCNVRITDVQ 187

Query: 209 PGYVNTDMSSG 219
           PG V T M   
Sbjct: 188 PGAVYTPMWGK 198

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 79.1 bits (196), Expect = 7e-18
 Identities = 42/234 (17%), Positives = 78/234 (33%), Gaps = 65/234 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           +TGA+ GIG  +     +   G  + + AR +   Q   +++          + D+   +
Sbjct: 37  ITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPD 94

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTN----YFALIDVCDI 106
            ++ + D +  E GG+D+ V NA I       +    +      TN    +         
Sbjct: 95  QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA 154

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
           +       G ++  +S  GH+ ++                                    
Sbjct: 155 MVDQGLG-GTIITTASMSGHIINI------------------------------------ 177

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMS 217
                 S Y  +K  V  L+    A+   L+   IR    VN V PGY+ T++ 
Sbjct: 178 --PQQVSHYCTSKAAVVHLT---KAMAVELAPHQIR----VNSVSPGYIRTELV 222

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 78.4 bits (194), Expect = 8e-18
 Identities = 56/238 (23%), Positives = 86/238 (36%), Gaps = 82/238 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK----------LDILDK 49
           VTGA  G G  I +  IQQ  G  +  T R   R    L++L+           LD+ ++
Sbjct: 5   VTGATAGFGECITRRFIQQ--GHKVIATGRRQER----LQELKDELGDNLYIAQLDVRNR 58

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL---HTM-RTNYFALIDVCD 105
            +I+ +   L AE   +D+LVNNA +A  +   EP    ++    TM  TN   L+ +  
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGM---EPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 106 ILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
            + P +  R+HG ++N+ S+ G                                      
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGS------------------------------------- 138

Query: 164 SHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTD 215
                 +     Y ATK  V + S           +R DL      V  + PG V   
Sbjct: 139 ----WPYAGGNVYGATKAFVRQFS---------LNLRTDLHGTAVRVTDIEPGLVGGT 183

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 78.8 bits (195), Expect = 9e-18
 Identities = 48/235 (20%), Positives = 72/235 (30%), Gaps = 66/235 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           VTGA  G+G  +   L     G  + L  R     QE   ++         D+ D +S++
Sbjct: 33  VTGAGSGVGRAVAVALAGA--GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVR 90

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFP 109
           AL      + G VDVL NNA        + P            + TN           F 
Sbjct: 91  ALFTATVEKFGRVDVLFNNAGTGAP---AIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFR 147

Query: 110 LLRSH----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
           ++++     GR++N  S                                           
Sbjct: 148 VMKAQEPRGGRIINNGSISATS-------------------------------------- 169

Query: 166 TKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                P SA Y ATK  +T L+       S D    D+    +  G  +T M+  
Sbjct: 170 ---PRPYSAPYTATKHAITGLT----KSTSLDGRVHDIACGQIDIGNADTPMAQK 217

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 78.8 bits (195), Expect = 1e-17
 Identities = 60/229 (26%), Positives = 91/229 (39%), Gaps = 60/229 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
           +TGAN G+G    + L ++    + +  RD  +G+ A   +      ++LD+ D +S++ 
Sbjct: 21  ITGANSGLGAVTARELARR-GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRR 79

Query: 55  LHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNY---FALIDVCDILFP 109
             D +       DVL+NNA I       + + F SQ    + TN+   FAL    ++L P
Sbjct: 80  FADGVSG----ADVLINNAGIMAVPYALTVDGFESQ----IGTNHLGHFALT---NLLLP 128

Query: 110 LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
            L    RVV VSS                + H    +           +L    S     
Sbjct: 129 RLTD--RVVTVSS----------------MAHWPGRI--------NLEDL-NWRSRRYSP 161

Query: 170 WPNSAYAATKLGVTKLSF---LQHALLSQDAIREDLVVNCVHPGYVNTD 215
           W   AY+ +KL    L F   LQ  L    A    L     HPGY +T+
Sbjct: 162 W--LAYSQSKLAN--LLFTSELQRRL---TAAGSPLRALAAHPGYSHTN 203

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 54/240 (22%), Positives = 81/240 (33%), Gaps = 70/240 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQKL---------DIL 47
           VTG ++GIG  I K L    +G    + Y     A R Q  + ++++          D  
Sbjct: 36  VTGGSRGIGAAIAKRLAL--EGAAVALTY--VNAAERAQAVVSEIEQAGGRAVAIRADNR 91

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDI 106
           D  +I+          GG+D+LVN+A I +     E          M  N+ A       
Sbjct: 92  DAEAIEQAIRETVEALGGLDILVNSAGI-WHSAPLEETTVADFDEVMAVNFRAPFVAIRS 150

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
               L   GR++ + S+                                  EL       
Sbjct: 151 ASRHLGDGGRIITIGSN--------------------------------LAELV------ 172

Query: 167 KGGWPNSA-YAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
              WP  + Y+A+K  +  L+     L   L    I     VN VHPG  +TDM+   G 
Sbjct: 173 --PWPGISLYSASKAALAGLT---KGLARDLGPRGIT----VNIVHPGSTDTDMNPADGD 223

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 47/239 (19%), Positives = 74/239 (30%), Gaps = 70/239 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----------KLDILDK 49
           VTG   G+G GI + L  +  G  + +T R       A  ++             D+ D 
Sbjct: 38  VTGGGTGVGRGIAQALSAE--GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDP 95

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCD 105
           + + AL   + AE   +D+LVNNA          P            +  N         
Sbjct: 96  DQVAALFAAVRAEFARLDLLVNNAGSNVP---PVPLEEVTFEQWNGIVAANLTGAFLCTQ 152

Query: 106 ILFPLLRSH----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQ 161
             F ++++     GR++N  S                                       
Sbjct: 153 HAFRMMKAQTPRGGRIINNGSISAQT---------------------------------- 178

Query: 162 DGSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                    PNSA Y ATK  +T L+       + D    D+    +  G   TDM++ 
Sbjct: 179 -------PRPNSAPYTATKHAITGLT----KSTALDGRMHDIACGQIDIGNAATDMTAR 226

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 50/237 (21%), Positives = 82/237 (34%), Gaps = 69/237 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL------------DIL 47
           +TG++ GIG        Q+  G  + +T R + R +E  + + K             D+ 
Sbjct: 11  ITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDV 103
            ++    + +    + G +DVLVNNA  A           Q +     T++ N  A+I++
Sbjct: 69  TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEM 128

Query: 104 CDILFP-LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
              + P L+ S G +VNVSS                                        
Sbjct: 129 TKKVKPHLVASKGEIVNVSSIVAGP----------------------------------- 153

Query: 163 GSHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               +       YA  K  +   T+ + +  A   +  IR    VN V PG V T  
Sbjct: 154 ----QAQPDFLYYAIAKAALDQYTRSTAIDLA---KFGIR----VNSVSPGMVETGF 199

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 77.9 bits (193), Expect = 1e-17
 Identities = 45/236 (19%), Positives = 79/236 (33%), Gaps = 76/236 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           VTG   G+G  +VK L+ +  G  +  +  + + GQ+   +L       + D+  +    
Sbjct: 11  VTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWT 68

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------C 104
            +   ++   G ++VLVNNA I              + T R   F  L+ +        C
Sbjct: 69  LVMAAVQRRLGTLNVLVNNAGIL---------LPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 105 DILFPLLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
                 ++   G ++N++S    L                                    
Sbjct: 120 QQGIAAMKETGGSIINMASVSSWL------------------------------------ 143

Query: 164 SHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                    + Y+A+K  V   T+ + L        AIR    VN +HP  + T M
Sbjct: 144 ----PIEQYAGYSASKAAVSALTRAAALSCR-KQGYAIR----VNSIHPDGIYTPM 190

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 60/240 (25%), Positives = 83/240 (34%), Gaps = 71/240 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQ---------KLDIL 47
           VTGA++GIG  I   L    DG    I Y  A  A+  +E   K++         + D+ 
Sbjct: 32  VTGASRGIGAAIAARLAS--DGFTVVINY--AGKAAAAEEVAGKIEAAGGKALTAQADVS 87

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDI 106
           D  +++ L    E   GGVDVLVNNA I   + +    G       +  N     +    
Sbjct: 88  DPAAVRRLFATAEEAFGGVDVLVNNAGIM-PLTTIAETGDAVFDRVIAVNLKGTFNTLRE 146

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
               LR  GR++N+S+S   L                                       
Sbjct: 147 AAQRLRVGGRIINMSTSQVGL--------------------------------------- 167

Query: 167 KGGWPNSA-YAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
               P+   YAA K GV  ++   H L   L    I     VN V PG   TD+      
Sbjct: 168 --LHPSYGIYAAAKAGVEAMT---HVLSKELRGRDIT----VNAVAPGPTATDLFLEGKS 218

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 39/234 (16%), Positives = 66/234 (28%), Gaps = 69/234 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTG   GIG        ++  G  + L+  D    ++A+  L+           D+   +
Sbjct: 36  VTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLD 93

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH----TMRTNYFALIDVCDI 106
            +  L D      GGVDV+ +NA I      + P            +  + +  I   + 
Sbjct: 94  EMVRLADEAFRLLGGVDVVFSNAGIV----VAGPLAQMNHDDWRWVIDIDLWGSIHAVEA 149

Query: 107 LFPLLRSHGR---VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
             P L   G    +   +S  G +                                    
Sbjct: 150 FLPRLLEQGTGGHIAFTASFAGLV------------------------------------ 173

Query: 164 SHTKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                       Y   K GV  L+      +  + I     V+ + P  V T +
Sbjct: 174 -----PNAGLGTYGVAKYGVVGLAETLAREVKPNGIG----VSVLCPMVVETKL 218

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 77.6 bits (192), Expect = 2e-17
 Identities = 45/241 (18%), Positives = 74/241 (30%), Gaps = 81/241 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQK------------LDIL 47
           VTGA+ GIG        +   G  + L  R+  + ++    + +            L   
Sbjct: 17  VTGASDGIGREAAMTYARY--GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTC 74

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTN---YFAL 100
              + + L   +   +  +D +++NA +   V    P   Q        M+ N    F L
Sbjct: 75  TSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVC---PMSEQNPQVWQDVMQVNVNATFML 131

Query: 101 IDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
                   PLL     G +V  SSS G                                 
Sbjct: 132 TQAL---LPLLLKSDAGSLVFTSSSVGRQG------------------------------ 158

Query: 159 LAQDGSHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
                   +  W   AYAA+K       ++   ++       +R    VNC++PG   T 
Sbjct: 159 --------RANW--GAYAASKFATEGMMQVLADEYQ----QRLR----VNCINPGGTRTA 200

Query: 216 M 216
           M
Sbjct: 201 M 201

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 77.5 bits (192), Expect = 2e-17
 Identities = 51/230 (22%), Positives = 80/230 (34%), Gaps = 63/230 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ-------KLDILDKNSI 52
           VTGA  GIG  I +       G  + L  R+A+    A ++L          D+ D  ++
Sbjct: 16  VTGAGSGIGLEICRAFAAS--GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAM 73

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFP-- 109
            A     EA    V +LVN+A IA +++ +           M  N   +           
Sbjct: 74  TAAAAEAEA-VAPVSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFWASRAFGRAM 131

Query: 110 LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           + R  G +VN+ S  G + +                                        
Sbjct: 132 VARGAGAIVNLGSMSGTIVNR--------------------------------------P 153

Query: 170 WPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
              S+Y A+K  V +L+    AL    +   +R    VN + PGYV T+M
Sbjct: 154 QFASSYMASKGAVHQLT---RALAAEWAGRGVR----VNALAPGYVATEM 196

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 77.5 bits (192), Expect = 2e-17
 Identities = 47/235 (20%), Positives = 75/235 (31%), Gaps = 67/235 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL---------DILDKN 50
           VT +  GIG  I + L Q   G  + +++R        +  LQ            +    
Sbjct: 19  VTASTDGIGLAIARRLAQD--GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE 76

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFP 109
             + L       HGGVD+LV+NAA+     +      +     +  N  A + +   + P
Sbjct: 77  DRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVP 136

Query: 110 LL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
            +  R  G V+ VSS   +                                         
Sbjct: 137 EMEKRGGGSVLIVSSVGAY----------------------------------------H 156

Query: 168 GGWPNSAYAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTDMSS 218
                  Y  +K  +   TK      A+ L+   IR    VNC+ PG + T+ S 
Sbjct: 157 PFPNLGPYNVSKTALLGLTK----NLAVELAPRNIR----VNCLAPGLIKTNFSQ 203

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 76.2 bits (188), Expect = 2e-17
 Identities = 32/224 (14%), Positives = 65/224 (29%), Gaps = 71/224 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           + GA+  +G  + + L ++ + I       A R    +     +DI + +SIK +++   
Sbjct: 8   LIGASGTLGSAVKERLEKKAEVIT------AGRHSGDV----TVDITNIDSIKKMYE--- 54

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGS----QALHTMRTNYFALIDVCDILFPLLRSHGR 116
            + G VD +V+    A    +  P       +   T+ +     I++  +    L   G 
Sbjct: 55  -QVGKVDAIVSATGSA----TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGS 109

Query: 117 VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN-SAY 175
               +                                                    ++ 
Sbjct: 110 FTLTTGIMMED-----------------------------------------PIVQGASA 128

Query: 176 AATKLGVTKLSFLQH-ALLSQDAIREDLVVNCVHPGYVNTDMSS 218
           A     VT  +F +  A+     IR    +N V P  +      
Sbjct: 129 AMANGAVT--AFAKSAAIEMPRGIR----INTVSPNVLEESWDK 166

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 77.2 bits (191), Expect = 3e-17
 Identities = 47/231 (20%), Positives = 72/231 (31%), Gaps = 75/231 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHL 59
           VTGA  GIG  +V  L     G  + +  R  +     L      D+ +      L   +
Sbjct: 33  VTGAAGGIGGAVVTALRAA--GARVAVADRAVAGIAADLH--LPGDLREAAYADGLPGAV 88

Query: 60  EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------CDILFPL 110
            A  G +D++VNNA +              +       +   + V        C    PL
Sbjct: 89  AAGLGRLDIVVNNAGVI---------SRGRITETTDADWSLSLGVNVEAPFRICRAAIPL 139

Query: 111 LRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           + +   G +VNV+S  G                                         + 
Sbjct: 140 MAAAGGGAIVNVASCWG----------------------------------------LRP 159

Query: 169 GWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           G  ++ Y  TK  +   T+   + HA      IR    +N V P  VNT M
Sbjct: 160 GPGHALYCLTKAALASLTQCMGMDHA---PQGIR----INAVCPNEVNTPM 203

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 77.2 bits (191), Expect = 3e-17
 Identities = 36/237 (15%), Positives = 65/237 (27%), Gaps = 75/237 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQKL---------DIL 47
           + G  K +G    K      +     + Y  A+D+    +  ++L+           D+ 
Sbjct: 16  IAGGIKNLGALTAKTFAL--ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS 73

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN----SSEPFGSQALHTMRTNYFALIDV 103
           ++  +  L D  E E G VD+ +N      K      S   F +        N       
Sbjct: 74  NEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAM----DTINNKVAYFF 129

Query: 104 CDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
                  +  +G ++ +++S                                        
Sbjct: 130 IKQAAKHMNPNGHIITIATSLLAA------------------------------------ 153

Query: 164 SHTKGGWPN-SAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
                     S YA  K  V   +    A    L +  I     VN + PG ++T  
Sbjct: 154 -----YTGFYSTYAGNKAPVEHYT---RAASKELMKQQIS----VNAIAPGPMDTSF 198

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 77.2 bits (191), Expect = 3e-17
 Identities = 45/235 (19%), Positives = 70/235 (29%), Gaps = 72/235 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQKL---------DIL 47
           VTG+ +GIG  +   L +   G    + Y  A      ++ + +++ L         DI 
Sbjct: 23  VTGSGRGIGAAVAVHLGR--LGAKVVVNY--ANSTKDAEKVVSEIKALGSDAIAIKADIR 78

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDI 106
               I  L D   A  G +D+ V+N+ +       +    +        N      V   
Sbjct: 79  QVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQFFVARE 137

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
            +  L   GR+V  SS+                                           
Sbjct: 138 AYRHLTEGGRIVLTSSNTSKD--------------------------------------- 158

Query: 167 KGGWPN-SAYAATKLGVTKLSFLQHALLSQD----AIREDLVVNCVHPGYVNTDM 216
               P  S Y+ +K  V         + S+D     I     VN V PG   TDM
Sbjct: 159 -FSVPKHSLYSGSKGAVDSFV----RIFSKDCGDKKIT----VNAVAPGGTVTDM 204

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 77.3 bits (191), Expect = 3e-17
 Identities = 38/247 (15%), Positives = 70/247 (28%), Gaps = 70/247 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQKL---------DIL 47
           VTGA +GIG  +   L +   G    + Y  A      +E +  ++K          ++ 
Sbjct: 34  VTGAGRGIGREMAMELGR--RGCKVIVNY--ANSTESAEEVVAAIKKNGSDAACVKANVG 89

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDI 106
               I  + +      G +D++ +N+ +       +    +        N      V   
Sbjct: 90  VVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRGQFFVARE 148

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
            +  L   GR++ + S  G                                         
Sbjct: 149 AYKHLEIGGRLILMGSITGQA--------------------------------------- 169

Query: 167 KGGWPNSA-YAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
               P  A Y+ +K  +   +     +   ++   I     VN V PG + TDM      
Sbjct: 170 -KAVPKHAVYSGSKGAIETFA---RCMAIDMADKKIT----VNVVAPGGIKTDMYHAVCR 221

Query: 223 LTIDQDN 229
             I    
Sbjct: 222 EYIPNGE 228

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 77.2 bits (191), Expect = 3e-17
 Identities = 44/231 (19%), Positives = 78/231 (33%), Gaps = 75/231 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHL 59
           VTG + GIG  +V  L++   G  +   + D        +   K+D+ ++  +K   +  
Sbjct: 19  VTGGSSGIGLAVVDALVRY--GAKVVSVSLDEKSDVNVSDHF-KIDVTNEEEVKEAVEKT 75

Query: 60  EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------CDILFPL 110
             ++G +D+LVNNA I              LH   T  +  +IDV             P+
Sbjct: 76  TKKYGRIDILVNNAGIE---------QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPV 126

Query: 111 LRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           + +   G ++N++S   +                                          
Sbjct: 127 MLAIGHGSIINIASVQSY----------------------------------------AA 146

Query: 169 GWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               +AY  +K  +   T+   + +A      IR     N V PG + T M
Sbjct: 147 TKNAAAYVTSKHALLGLTRSVAIDYA----PKIR----CNAVCPGTIMTPM 189

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 76.4 bits (189), Expect = 5e-17
 Identities = 55/237 (23%), Positives = 89/237 (37%), Gaps = 74/237 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQK----------LDILDK 49
           VTG ++G+G+GI +GL +   G  + + +R+     EA +KL +           D+ + 
Sbjct: 26  VTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY 83

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILF 108
             +K L + ++ + G +D +VN A I  + + +E F        +  N F    VC   F
Sbjct: 84  EEVKKLLEAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAF 142

Query: 109 P--LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
                  +  ++N+ S                              +             
Sbjct: 143 SLLRESDNPSIINIGS------------------------------LTVEE--------- 163

Query: 167 KGGWPN-SAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
               PN SAYAA+K GV   TK      AL     +  IR    VN + PG+  T M
Sbjct: 164 -VTMPNISAYAASKGGVASLTK------ALAKEWGRYGIR----VNVIAPGWYRTKM 209

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 77.4 bits (191), Expect = 6e-17
 Identities = 45/249 (18%), Positives = 70/249 (28%), Gaps = 92/249 (36%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG--IIYLTARDASRGQEALEKLQK------------LDI 46
           +TG + GIG  +   L         +Y T RD        E  +             LD+
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDV 66

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFG-------SQALHTMRTNYFA 99
            D  S+ A  +      G VDVLV NA +          G             +  N   
Sbjct: 67  RDSKSVAAARE--RVTEGRVDVLVCNAGLGL-------LGPLEALGEDAVASVLDVNVVG 117

Query: 100 LIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
            + +     P ++    GRV+   S  G +                              
Sbjct: 118 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLM------------------------------ 147

Query: 158 ELAQDGSHTKGGWP-NSAYAATKLGVTKLSFLQHAL--LSQDAIREDLV-----VNCVHP 209
                      G P N  Y A+K           AL  L  +++   L+     ++ +  
Sbjct: 148 -----------GLPFNDVYCASK----------FALEGLC-ESLAVLLLPFGVHLSLIEC 185

Query: 210 GYVNTDMSS 218
           G V+T    
Sbjct: 186 GPVHTAFME 194

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 76.5 bits (189), Expect = 6e-17
 Identities = 55/243 (22%), Positives = 80/243 (32%), Gaps = 85/243 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK------------LDIL 47
           +TGA  G G    +   +   G  + LT R   R    L+ L              LD+ 
Sbjct: 26  ITGATSGFGEACARRFAEA--GWSLVLTGRREER----LQALAGELSAKTRVLPLTLDVR 79

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL---HTM-RTNYFALIDV 103
           D+ ++ A  D+L  E   +  L+NNA +A      +P  S  L    TM  TN   L+  
Sbjct: 80  DRAAMSAAVDNLPEEFATLRGLINNAGLALGT---DPAQSCDLDDWDTMVDTNIKGLLYS 136

Query: 104 CDILFPLLRSHGR---VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
             +L P L +HG    +VN+ S  G                                   
Sbjct: 137 TRLLLPRLIAHGAGASIVNLGSVAGKWP-------------------------------- 164

Query: 161 QDGSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNT 214
                    +P S  Y  TK  V + S           +R DL      V  + PG   +
Sbjct: 165 ---------YPGSHVYGGTKAFVEQFS---------LNLRCDLQGTGVRVTNLEPGLCES 206

Query: 215 DMS 217
           + S
Sbjct: 207 EFS 209

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 76.4 bits (189), Expect = 6e-17
 Identities = 44/238 (18%), Positives = 76/238 (31%), Gaps = 65/238 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----------KLDILDK 49
           VTG N+GIG    + +     G  + +  R A+   E  EK+           + D+ + 
Sbjct: 19  VTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 76

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNY---FALIDVCDI 106
           + +      ++A+ G +  L+ NA ++    ++E            N    F        
Sbjct: 77  DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK 136

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
           L+   +  G +V  SS    + +                                  S  
Sbjct: 137 LWLQKQQKGSIVVTSSMSSQIINQ---------------------------------SSL 163

Query: 167 KGGWPNSAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSS 218
            G      Y ++K       K       L    +   IR    VN + PGYVNTD ++
Sbjct: 164 NGSLTQVFYNSSKAACSNLVK------GLAAEWASAGIR----VNALSPGYVNTDQTA 211

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 76.4 bits (189), Expect = 6e-17
 Identities = 47/232 (20%), Positives = 76/232 (32%), Gaps = 78/232 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHL 59
           VTGA+ GIG  I +  + +  G  +   +       +      + D+ + + +KA  DH+
Sbjct: 13  VTGASMGIGRAIAERFVDE--GSKVIDLSIHDPGEAKYDH--IECDVTNPDQVKASIDHI 68

Query: 60  EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------CDILFPL 110
             E+G + VLVNNA I              + +M    +  +IDV             P 
Sbjct: 69  FKEYGSISVLVNNAGIE---------SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 119

Query: 111 LRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           +       +VN+SS    +                                         
Sbjct: 120 MIRSRDPSIVNISSVQASI----------------------------------------- 138

Query: 169 GWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
              N SAY  +K  V   TK   L +A      +R     N V P  ++T +
Sbjct: 139 ITKNASAYVTSKHAVIGLTKSIALDYA----PLLR----CNAVCPATIDTPL 182

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 76.1 bits (188), Expect = 7e-17
 Identities = 58/244 (23%), Positives = 85/244 (34%), Gaps = 83/244 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTGA++GIG  I + L     G  + LTARD  + +    ++            D+   +
Sbjct: 34  VTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSD 91

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------ 103
           +I A    + A HG  DVLVNNA + +            LHTM+   + ALI V      
Sbjct: 92  AIAAFATGVLAAHGRCDVLVNNAGVGWFGG--------PLHTMKPAEWDALIAVNLKAPY 143

Query: 104 --CDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
                  P +     G ++N+SS  G                                  
Sbjct: 144 LLLRAFAPAMIAAKRGHIINISSLAGKN-------------------------------- 171

Query: 160 AQDGSHTKGGWPNSA-YAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTD 215
                       + A Y A+K G+  L     +    L Q  +R    V+ V PG V T+
Sbjct: 172 ---------PVADGAAYTASKWGLNGLM---TSAAEELRQHQVR----VSLVAPGSVRTE 215

Query: 216 MSSG 219
              G
Sbjct: 216 FGVG 219

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 75.3 bits (186), Expect = 1e-16
 Identities = 55/243 (22%), Positives = 81/243 (33%), Gaps = 85/243 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK-------------LDI 46
           +TGA+ GIG    + L  +  G  + + AR   +    L  L               LD+
Sbjct: 12  ITGASSGIGEATARALAAE--GAAVAIAARRVEK----LRALGDELTAAGAKVHVLELDV 65

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL---HTM-RTNYFALID 102
            D+  + A         GG+D+LVNNA I        P           M  TN   L+ 
Sbjct: 66  ADRQGVDAAVASTVEALGGLDILVNNAGIML----LGPVEDADTTDWTRMIDTNLLGLMY 121

Query: 103 VCDILFP-LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQ 161
           +     P LLRS G VV +SS  G +                                  
Sbjct: 122 MTRAALPHLLRSKGTVVQMSSIAGRVNV-------------------------------- 149

Query: 162 DGSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTD 215
                     N+A Y ATK GV   S         + +R+++      V  + PG  +T+
Sbjct: 150 ---------RNAAVYQATKFGVNAFS---------ETLRQEVTERGVRVVVIEPGTTDTE 191

Query: 216 MSS 218
           +  
Sbjct: 192 LRG 194

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 75.3 bits (186), Expect = 1e-16
 Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 78/237 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIK 53
           +TGA+ GIG  I +   ++   ++ L AR   R    L+ L        ++D+ DK +  
Sbjct: 21  ITGASSGIGEAIARRFSEEGHPLL-LLARRVER----LKALNLPNTLCAQVDVTDKYTFD 75

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL---HTM-RTNYFALIDVCDILFP 109
                 E  +G  D +VNNA +           +Q       M   N   L++    +  
Sbjct: 76  TAITRAEKIYGPADAIVNNAGMML----LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLA 131

Query: 110 LL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
            +  R+ G ++N+SS  G                                          
Sbjct: 132 PMKARNCGTIINISSIAGKKTF-------------------------------------- 153

Query: 168 GGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTDMSS 218
              P+ A Y  TK  V  +S         + +RE++      V  + P  V T++ S
Sbjct: 154 ---PDHAAYCGTKFAVHAIS---------ENVREEVAASNVRVMTIAPSAVKTELLS 198

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 75.2 bits (186), Expect = 1e-16
 Identities = 55/235 (23%), Positives = 84/235 (35%), Gaps = 78/235 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----KLDILDKNSIKAL 55
           VTG  +GIG  I +   ++  G ++ L       G+E  E +     ++D+ D+      
Sbjct: 11  VTGGARGIGRAIAQAFARE--GALVALCDLRP-EGKEVAEAIGGAFFQVDLEDERERVRF 67

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------CDI 106
            +      G VDVLVNNAAIA         GS    T+R   +  +++V          +
Sbjct: 68  VEEAAYALGRVDVLVNNAAIA-------APGS--ALTVRLPEWRRVLEVNLTAPMHLSAL 118

Query: 107 LFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
               +R    G +VNV+S                          +  L            
Sbjct: 119 AAREMRKVGGGAIVNVAS--------------------------VQGLF----------- 141

Query: 165 HTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                  N+AY A+K G+   T+   L  A      IR    VN V PG + T+ 
Sbjct: 142 ---AEQENAAYNASKGGLVNLTRSLALDLA---PLRIR----VNAVAPGAIATEA 186

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 74.9 bits (185), Expect = 1e-16
 Identities = 40/238 (16%), Positives = 67/238 (28%), Gaps = 76/238 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL----------QKLDILDK 49
           +TGA++GIG  I + L +   G  + L AR   R ++   +L            LD+   
Sbjct: 7   ITGASRGIGEAIARALARD--GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA 64

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL---HTM-RTNYFALIDVCD 105
            S++     +    G VDV+V NA + +     +     +    H M   N   +     
Sbjct: 65  ESVEEFSKKVLERFGDVDVVVANAGLGY----FKRLEELSEEEFHEMIEVNLLGVWRTLK 120

Query: 106 ILFPLLRSHGR--VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
                L+  G   +V  S                                          
Sbjct: 121 AFLDSLKRTGGLALVTTSDVSAR------------------------------------- 143

Query: 164 SHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIRED---LVVNCVHPGYVNTDMSS 218
                G     Y +TK     L             + +   +    + PG V+T    
Sbjct: 144 -LIPYG---GGYVSTKWAARALV---------RTFQIENPDVRFFELRPGAVDTYFGG 188

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 75.3 bits (186), Expect = 1e-16
 Identities = 47/238 (19%), Positives = 75/238 (31%), Gaps = 81/238 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           VTGA  GIG  + + L  +  G  +     D      A  K+       ++D+ D+  I 
Sbjct: 34  VTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQII 91

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------C 104
           A+ D   A  GGVD LV NA +             +L       F  +I +         
Sbjct: 92  AMVDACVAAFGGVDKLVANAGVV---------HLASLIDTTVEDFDRVIAINLRGAWLCT 142

Query: 105 DILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
               P +     G +VN+SS  G +                                   
Sbjct: 143 KHAAPRMIERGGGAIVNLSSLAGQV----------------------------------- 167

Query: 163 GSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                       AY  +K G+   ++++  +        IR     N + P +V+T M
Sbjct: 168 ------AVGGTGAYGMSKAGIIQLSRITAAELR---SSGIR----SNTLLPAFVDTPM 212

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 74.9 bits (185), Expect = 2e-16
 Identities = 41/237 (17%), Positives = 80/237 (33%), Gaps = 79/237 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           VTG   GIG    +   +   G  + +   +         ++       ++D+      +
Sbjct: 32  VTGGGSGIGRATAELFAKN--GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAE 89

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------C 104
           ++ +   A+ G VDVLVNNA            G+  + T+    +  ++ V         
Sbjct: 90  SMVEKTTAKWGRVDVLVNNAGFG-------TTGN--VVTIPEETWDRIMSVNVKGIFLCS 140

Query: 105 DILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
             + P++R +  G ++N +S                           +A           
Sbjct: 141 KYVIPVMRRNGGGSIINTTS--------------------------YTATS--------- 165

Query: 163 GSHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                     +AY A+K  +   T+   + HA   ++ IR    VN V PG +++  
Sbjct: 166 -----AIADRTAYVASKGAISSLTRAMAMDHA---KEGIR----VNAVAPGTIDSPY 210

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 74.5 bits (184), Expect = 2e-16
 Identities = 34/230 (14%), Positives = 58/230 (25%), Gaps = 65/230 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQKLDILDKNSIKALH 56
           VT A    G   V+ L Q   G        +  DA+  Q    +      L +   + L 
Sbjct: 6   VTHARHFAGPAAVEALTQD--GYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLV 63

Query: 57  DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDILFPLLR 112
           D        +D +V+N  I  +  +  P    +               I +       LR
Sbjct: 64  DATLQHGEAIDTIVSNDYIP-RPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLR 122

Query: 113 S--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +     V+ ++SS G                                             
Sbjct: 123 AAGGASVIFITSSVGKK-----------------------------------------PL 141

Query: 171 PNSA-YAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
             +  Y   +     L     +    LS+D I     +  + P + N   
Sbjct: 142 AYNPLYGPARAATVALV---ESAAKTLSRDGIL----LYAIGPNFFNNPT 184

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 74.4 bits (184), Expect = 2e-16
 Identities = 50/241 (20%), Positives = 78/241 (32%), Gaps = 80/241 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL----------QKLDILDK 49
           VTGA+ G G  I    + +  G  +      A   +E                + D+ D+
Sbjct: 7   VTGASSGNGLAIATRFLAR--GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE 64

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV----- 103
             + A       + G +DVLVNNA I      +    +  LHT     F  ++ V     
Sbjct: 65  GDVNAAIAATMEQFGAIDVLVNNAGI------TGNSEAGVLHTTPVEQFDKVMAVNVRGI 118

Query: 104 ---CDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
              C  + P +     G +VN++S                          +++L+     
Sbjct: 119 FLGCRAVLPHMLLQGAGVIVNIAS--------------------------VASLV----- 147

Query: 159 LAQDGSHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
                         SAY  +K  V   TK   + +A      IR     N V PG + T 
Sbjct: 148 ---------AFPGRSAYTTSKGAVLQLTKSVAVDYA---GSGIR----CNAVCPGMIETP 191

Query: 216 M 216
           M
Sbjct: 192 M 192

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 74.5 bits (184), Expect = 3e-16
 Identities = 46/246 (18%), Positives = 81/246 (32%), Gaps = 96/246 (39%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           +TG+ +GIG    +  ++  +G  + +   D  R ++A  ++       ++D+  ++SI 
Sbjct: 13  ITGSARGIGRAFAEAYVR--EGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSID 70

Query: 54  ALHDHLEAEHGGVDVLVNNAAIA----------------FKVNSSEPF-GSQA-LHTMRT 95
           A         GG+D+LVNNAA+                 F +N +      QA    M  
Sbjct: 71  AAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIA 130

Query: 96  NYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE 155
                              G+++N++S  G                              
Sbjct: 131 Q---------------GRGGKIINMASQAGRR---------------------------- 147

Query: 156 FVELAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCVHPG 210
                        G    + Y ATK  V   T+ +     L L +  I     VN + PG
Sbjct: 148 -------------GEALVAIYCATKAAVISLTQSA----GLDLIKHRIN----VNAIAPG 186

Query: 211 YVNTDM 216
            V+ + 
Sbjct: 187 VVDGEH 192

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 74.1 bits (183), Expect = 3e-16
 Identities = 42/241 (17%), Positives = 75/241 (31%), Gaps = 83/241 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTGA   IG      L ++  G  I L   +    ++A   ++           D+  + 
Sbjct: 12  VTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEE 69

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------ 103
           ++    D +  + G +D L NNA                +    ++ F  ++ +      
Sbjct: 70  AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP--------VQDYPSDDFARVLTINVTGAF 121

Query: 104 --CDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
                +   + +  +GR+VN +S  G                                  
Sbjct: 122 HVLKAVSRQMITQNYGRIVNTASMAGVK-------------------------------- 149

Query: 160 AQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
                    G PN +AY  +K  +   T+ + L  A      IR    VN + PGY+   
Sbjct: 150 ---------GPPNMAAYGTSKGAIIALTETAALDLA---PYNIR----VNAISPGYMGPG 193

Query: 216 M 216
            
Sbjct: 194 F 194

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 74.1 bits (183), Expect = 3e-16
 Identities = 46/237 (19%), Positives = 68/237 (28%), Gaps = 86/237 (36%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTGA KGIGY      ++    +                  + +D+ D   +  +   L 
Sbjct: 12  VTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFAT--EVMDVADAAQVAQVCQRLL 69

Query: 61  AEHGGVDVLVNNAAIA----------------FKVNSSEPF-GSQA-LHTMRTNYFALID 102
           AE   +D LVN A I                 F VN    F   Q  ++  R        
Sbjct: 70  AETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRR------- 122

Query: 103 VCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
                    +  G +V V+S   H                                    
Sbjct: 123 ---------QRGGAIVTVASDAAH------------------------------------ 137

Query: 163 GSHTKGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
                     SAY A+K  +  L+    ++   L+   +R     N V PG  +TDM
Sbjct: 138 ----TPRIGMSAYGASKAALKSLA---LSVGLELAGSGVR----CNVVSPGSTDTDM 183

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 74.1 bits (183), Expect = 4e-16
 Identities = 50/247 (20%), Positives = 84/247 (34%), Gaps = 84/247 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTG+  GIG    + L ++  G  + +   +A   +   +++           +D+ D  
Sbjct: 14  VTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPE 71

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------ 103
           S KA+ D   AE GG+D LVNNAAI   +          L T+   Y+   + V      
Sbjct: 72  SAKAMADRTLAEFGGIDYLVNNAAIFGGMKLD------FLLTIDPEYYKKFMSVNLDGAL 125

Query: 104 --CDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
                ++  +     G +VN SS+   L                                
Sbjct: 126 WCTRAVYKKMTKRGGGAIVNQSSTAAWL-------------------------------- 153

Query: 160 AQDGSHTKGGWPNSAYAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTD 215
                          Y   K+G+   T+    Q +  L    IR    +N + PG ++T+
Sbjct: 154 ---------YSNY--YGLAKVGINGLTQ----QLSRELGGRNIR----INAIAPGPIDTE 194

Query: 216 MSSGKGP 222
            +    P
Sbjct: 195 ANRTTTP 201

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 74.2 bits (183), Expect = 4e-16
 Identities = 48/249 (19%), Positives = 74/249 (29%), Gaps = 76/249 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQ---------KLDIL 47
            TGA +GIG GI   L +   G    + Y     +   +E + +L+         + DI 
Sbjct: 26  TTGAGRGIGRGIAIELGR--RGASVVVNY--GSSSKAAEEVVAELKKLGAQGVAIQADIS 81

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRTNYFALIDV 103
             + + AL D   +  GG+D +++N+ +         + E F          N      V
Sbjct: 82  KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFD----KVFNLNTRGQFFV 137

Query: 104 CDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
                   R  GR++  SS    +                                    
Sbjct: 138 AQQGLKHCRRGGRIILTSSIAAVM------------------------------------ 161

Query: 164 SHTKGGWPN-SAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSG 219
                G PN + YA +K  V        A         +     VNC+ PG V TDM   
Sbjct: 162 ----TGIPNHALYAGSKAAVEGFC---RAFAVDCGAKGVT----VNCIAPGGVKTDMFDE 210

Query: 220 KGPLTIDQD 228
                    
Sbjct: 211 NSWHYAPGG 219

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 74.6 bits (184), Expect = 4e-16
 Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 68/234 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----------KLDILDK 49
           +TG   G+G G+   L     G    + +R     +   E++           + D+ D 
Sbjct: 31  ITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP 88

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILF 108
           + ++     L    G  ++++NNAA  F ++ +E     A  T           V   + 
Sbjct: 89  DMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIG 147

Query: 109 P-LLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
             L+++      +++++                                           
Sbjct: 148 KQLIKAQKGAAFLSITTIYAET-------------------------------------- 169

Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
             G       A+ K GV  +S    +L     +  +R     N + PG + T  
Sbjct: 170 --GSGFVVPSASAKAGVEAMS---KSLAAEWGKYGMR----FNVIQPGPIKTKG 214

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 73.4 bits (181), Expect = 7e-16
 Identities = 43/235 (18%), Positives = 67/235 (28%), Gaps = 72/235 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           +TG   G+G  +V   + +  G  + +  + A R +E              D+      K
Sbjct: 10  ITGGASGLGRALVDRFVAE--GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQK 67

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV-------C-- 104
              +   A  G +D L+ NA I    + S          +   +  +  V          
Sbjct: 68  RAAERCLAAFGKIDTLIPNAGIW---DYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVK 124

Query: 105 DILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             L  L+ S G VV   S+ G                                       
Sbjct: 125 ACLPALVSSRGSVVFTISNAGF-------------------------------------- 146

Query: 165 HTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                     Y ATK  V    +    + A      +R    VN V PG +NTD+
Sbjct: 147 --YPNGGGPLYTATKHAVVGLVRQMAFELA----PHVR----VNGVAPGGMNTDL 191

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 72.9 bits (180), Expect = 8e-16
 Identities = 44/236 (18%), Positives = 70/236 (29%), Gaps = 82/236 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL----QKLDILDKNSIKAL 55
           +T A +GIG        ++  G  +  T  + S+ QE  +      + LD+  K  I   
Sbjct: 11  LTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQF 68

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------CDI 106
            +    E   +DVL N A            G+  +       +   +++           
Sbjct: 69  AN----EVERLDVLFNVAGFV-------HHGT--VLDCEEKDWDFSMNLNVRSMYLMIKA 115

Query: 107 LFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             P + +   G ++N+SS    +                                     
Sbjct: 116 FLPKMLAQKSGNIINMSSVASSV------------------------------------- 138

Query: 165 HTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               G  N   Y+ TK  V   TK          Q  IR     NCV PG V+T  
Sbjct: 139 ---KGVVNRCVYSTTKAAVIGLTKSVAADFI---QQGIR----CNCVCPGTVDTPS 184

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 72.9 bits (180), Expect = 9e-16
 Identities = 46/242 (19%), Positives = 77/242 (31%), Gaps = 84/242 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           +TGA  G G G+ K   +   G  + +  RD +  +    ++         DI  +  + 
Sbjct: 14  ITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVD 71

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------C 104
           A  +   ++ G VD+LVNNA I  K  +           +    F  ++ V         
Sbjct: 72  AAVEAALSKFGKVDILVNNAGIGHKPQN--------AELVEPEEFDRIVGVNVRGVYLMT 123

Query: 105 DILFPLLRSHGR------VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
             L P  + +G       ++NV+S+                                   
Sbjct: 124 SKLIPHFKENGAKGQECVILNVASTGAGR------------------------------- 152

Query: 159 LAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
                       PN + Y ATK  V   TK   ++ A      IR    V  ++P    T
Sbjct: 153 ----------PRPNLAWYNATKGWVVSVTKALAIELA---PAKIR----VVALNPVAGET 195

Query: 215 DM 216
            +
Sbjct: 196 PL 197

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 72.7 bits (179), Expect = 9e-16
 Identities = 26/226 (11%), Positives = 63/226 (27%), Gaps = 61/226 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQKLDILDKNSIKALH 56
           V G    +G  I++   +   G     I L+A D +     +      +       +++ 
Sbjct: 8   VYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQADSNILV----DGNKNWTEQEQSIL 61

Query: 57  DHLEAE--HGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPLLRS 113
           +   +      VD +   A      ++S     +     ++ + ++      +    L+ 
Sbjct: 62  EQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP 121

Query: 114 HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN- 172
            G +    ++                                            G  P+ 
Sbjct: 122 GGLLQLTGAAAAM-----------------------------------------GPTPSM 140

Query: 173 SAYAATKLGVTKLSFLQHALLSQD--AIREDLVVNCVHPGYVNTDM 216
             Y   K  V  L+    + L+     + ++  V  + P  ++T M
Sbjct: 141 IGYGMAKAAVHHLT----SSLAAKDSGLPDNSAVLTIMPVTLDTPM 182

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 72.2 bits (178), Expect = 1e-15
 Identities = 36/235 (15%), Positives = 67/235 (28%), Gaps = 75/235 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKA 54
           +TGA+ G+G  + K    +      LT R  S+       L         D+     ++ 
Sbjct: 6   ITGASSGLGAELAKLYDAEGKATY-LTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQ 64

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQ---ALHTM-RTNYFALIDVCDILFPL 110
           L + L++       +V++A              Q    + T+   N  + I+V   L   
Sbjct: 65  LFEQLDSI---PSTVVHSAGSG----YFGLLQEQDPEQIQTLIENNLSSAINVLRELVKR 117

Query: 111 LRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
            +     VV + S+                                              
Sbjct: 118 YKDQPVNVVMIMSTAAQQ-----------------------------------------P 136

Query: 170 WPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV-----VNCVHPGYVNTDMSS 218
               + Y A K  V  L          +++R +L      +  V+PG + T+   
Sbjct: 137 KAQESTYCAVKWAVKGLI---------ESVRLELKGKPMKIIAVYPGGMATEFWE 182

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 72.9 bits (180), Expect = 1e-15
 Identities = 44/237 (18%), Positives = 77/237 (32%), Gaps = 77/237 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           +TGA  GIG  I         G  + ++  +A      ++++Q         + DI  + 
Sbjct: 16  ITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ 73

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
            + AL D   ++ G VD+LVNNA       F +     F          N F+   +  +
Sbjct: 74  ELSALADFAISKLGKVDILVNNAGGGGPKPFDM-PMADFRR----AYELNVFSFFHLSQL 128

Query: 107 LFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
           + P +     G ++ ++S                                          
Sbjct: 129 VAPEMEKNGGGVILTITSMAAEN------------------------------------- 151

Query: 165 HTKGGWPN-SAYAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTDM 216
                  N ++YA++K       +      A  L +  IR    VN + PG + TD 
Sbjct: 152 ----KNINMTSYASSKAAASHLVR----NMAFDLGEKNIR----VNGIAPGAILTDA 196

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 73.0 bits (180), Expect = 1e-15
 Identities = 47/243 (19%), Positives = 79/243 (32%), Gaps = 86/243 (35%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTGA+ GIG        ++  G  + +TAR+ +   E  +++            D+ D+ 
Sbjct: 13  VTGASSGIGRAAALLFARE--GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEA 70

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVCDI 106
             +AL +      GG+D   NNA     + +     S ++     T+ TN   L      
Sbjct: 71  LHEALVELAVRRFGGLDTAFNNAGA---LGAMGEISSLSVEGWRETLDTN---LTSA--- 121

Query: 107 LF-------PLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
            F       P + +   G +   SS  GH                               
Sbjct: 122 -FLAAKYQVPAIAALGGGSLTFTSSFVGHT------------------------------ 150

Query: 158 ELAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVN 213
                      G+   + YAA+K G+    +   ++        IR    VN + PG  +
Sbjct: 151 ----------AGFAGVAPYAASKAGLIGLVQALAVELG---ARGIR----VNALLPGGTD 193

Query: 214 TDM 216
           T  
Sbjct: 194 TPA 196

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 72.2 bits (178), Expect = 2e-15
 Identities = 38/235 (16%), Positives = 68/235 (28%), Gaps = 71/235 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL-----------DILD 48
           VT  + G+G+     L +   G  + L +R+  + + A  ++  L           DI +
Sbjct: 12  VTAGSSGLGFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE 69

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRTNYFALIDVC 104
              I  L +    + GG D+LV +        F     E +      + R    + + V 
Sbjct: 70  PGDIDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVEDW----DESYRLLARSAVWVG 124

Query: 105 DILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
                 +     GR+V + S                                        
Sbjct: 125 RRAAEQMVEKGWGRMVYIGSVTL------------------------------------- 147

Query: 163 GSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                  W + A     +L V  +       L+ +     + VN V P  + TD 
Sbjct: 148 ----LRPWQDLALSNIMRLPVIGVV----RTLALELAPHGVTVNAVLPSLILTDR 194

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 45/242 (18%), Positives = 76/242 (31%), Gaps = 87/242 (35%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ-----------KLDILD 48
           VTGA +GIG    + L+ +  G  + L   +   G +    L            + D+ D
Sbjct: 12  VTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 69

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIA--------FKVNSSEPF-GSQ-ALHTMRTNYF 98
           +  ++     +    G +D+LVNNA +          ++N      G+   L  M     
Sbjct: 70  QQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNG 129

Query: 99  ALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
                           G ++N+SS  G +                               
Sbjct: 130 G-------------EGGIIINMSSLAGLM------------------------------- 145

Query: 159 LAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
                            Y A+K G+   T+ S    A L    +R    +N + PG+VNT
Sbjct: 146 ----------PVAQQPVYCASKHGIVGFTR-SAALAANLMNSGVR----LNAICPGFVNT 190

Query: 215 DM 216
            +
Sbjct: 191 AI 192

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 72.2 bits (178), Expect = 2e-15
 Identities = 37/236 (15%), Positives = 74/236 (31%), Gaps = 76/236 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL-----------DILD 48
           VTG+  GIG  I   L+ +  G  + +  R      E +++++             D+  
Sbjct: 15  VTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQA-LHTMRTNYFALIDVCDIL 107
           +   + +      ++  VD+L+NN  I F+         +        N  + + +    
Sbjct: 73  EQGCQDV----IEKYPKVDILINNLGI-FEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSY 127

Query: 108 FPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
              +  R  GRV+ ++S                                           
Sbjct: 128 LKKMIERKEGRVIFIASEAA---------------------------------------- 147

Query: 166 TKGGWPN-SAYAATK---LGVTK-LSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                   + Y+ATK   L +++ L+     L +   +     VN + PG   T+ 
Sbjct: 148 -IMPSQEMAHYSATKTMQLSLSRSLA----ELTTGTNVT----VNTIMPGSTLTEG 194

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 44/240 (18%), Positives = 69/240 (28%), Gaps = 70/240 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDA---------SRGQEALEKLQKLDIL 47
           V GA + IG        Q+  G    + Y  A +            G+ AL    K D+ 
Sbjct: 13  VAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSAL--AIKADLT 68

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDI 106
           +   ++A       + G +  LV+ A       +         H  +  N  +L      
Sbjct: 69  NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKT 128

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
             P +   G +V  SS  G                                         
Sbjct: 129 ALPKMAKGGAIVTFSSQAGRD--------------------------------------- 149

Query: 167 KGGWPNSA-YAATKLGVTKLSFLQHALLSQD---AIREDLVVNCVHPGYVNTDMSSGKGP 222
            GG P +  YA +K  V   +      L+++    IR    VN V PG ++T        
Sbjct: 150 -GGGPGALAYATSKGAVMTFT----RGLAKEVGPKIR----VNAVCPGMISTTFHDTFTK 200

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 71.4 bits (176), Expect = 3e-15
 Identities = 52/246 (21%), Positives = 72/246 (29%), Gaps = 92/246 (37%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----------KLDILDK 49
           VTG  KGIG GI     +   G  + +  R  +     +  L           + D+ D+
Sbjct: 15  VTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDR 72

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV----- 103
               AL      E GG+DV+  NA +         F    L TM       +  V     
Sbjct: 73  AQCDALAGRAVEEFGGIDVVCANAGV---------FPDAPLATMTPEQLNGIFAVNVNGT 123

Query: 104 --C--DILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
                  L  L+ S  GRVV  SS  G +                               
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPI------------------------------- 152

Query: 159 LAQDGSHTKG--GWPNSAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPG 210
                    G  GW +  Y ATK       +           L+   I     VN + PG
Sbjct: 153 --------TGYPGWSH--YGATKAAQLGFMR------TAAIELAPHKIT----VNAIMPG 192

Query: 211 YVNTDM 216
            + T+ 
Sbjct: 193 NIMTEG 198

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 71.4 bits (176), Expect = 4e-15
 Identities = 47/229 (20%), Positives = 70/229 (30%), Gaps = 62/229 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL---------DILDKN 50
           VTGA  GIG  I  G  +   G  +    R     +E  +++            D+ D  
Sbjct: 36  VTGAGSGIGRAIAHGYARA--GAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLE 92

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFP 109
               + + L      VDVLVNNA I      +E          +  N  A   +      
Sbjct: 93  GAANVAEELA-ATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGT 150

Query: 110 LL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
            +     GR+V ++S                                             
Sbjct: 151 AMLAHGSGRIVTIASMLSFQ---------------------------------------- 170

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           GG   +AYAA+K  V  L+    +  +   +     VN + PGYV T  
Sbjct: 171 GGRNVAAYAASKHAVVGLTRALASEWAGRGVG----VNALAPGYVVTAN 215

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 71.4 bits (176), Expect = 4e-15
 Identities = 51/238 (21%), Positives = 81/238 (34%), Gaps = 67/238 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGII-YLTARDA---------SRGQEALEKLQKLDILDK 49
           VTGA++GIG  I K L        I Y   ++          S G  A       ++   
Sbjct: 12  VTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF--SIGANLESL 69

Query: 50  NSIKALHDHLEAE------HGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALID 102
           + ++AL+  L+ E          D+L+NNA I       E    Q     +  N  A   
Sbjct: 70  HGVEALYSSLDNELQNRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFF 128

Query: 103 VCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
           +       LR + R++N+SS+   +                                   
Sbjct: 129 IIQQALSRLRDNSRIINISSAATRI----------------------------------- 153

Query: 163 GSHTKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                   P+  AY+ TK  +  ++F     L    I     VN + PG+V TDM++ 
Sbjct: 154 ------SLPDFIAYSMTKGAINTMTFTLAKQLGARGIT----VNAILPGFVKTDMNAE 201

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 71.2 bits (175), Expect = 4e-15
 Identities = 23/227 (10%), Positives = 47/227 (20%), Gaps = 63/227 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQKLDILDKNSIKALH 56
           V G    +G   V+             I +   + +     ++        ++       
Sbjct: 12  VYGGRGALGSRCVQAFRA--RNWWVASIDVVENEEASASVIVK--MTDSFTEQADQVTAE 67

Query: 57  DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPLLRSHG 115
                    VD ++  A      N+      +      + + +       +    L+  G
Sbjct: 68  VGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG 127

Query: 116 RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN-SA 174
            +    +                                              G P    
Sbjct: 128 LLTLAGAKAAL-----------------------------------------DGTPGMIG 146

Query: 175 YAATKLGVTKLSFLQHAL---LSQD--AIREDLVVNCVHPGYVNTDM 216
           Y   K  V       H L   L+     +        V P  ++T M
Sbjct: 147 YGMAKGAV-------HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM 186

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 71.4 bits (176), Expect = 4e-15
 Identities = 45/247 (18%), Positives = 71/247 (28%), Gaps = 95/247 (38%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTG+++G+G      L +    I+   AR      E  E+++KL         ++     
Sbjct: 9   VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAK 68

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIA----------------FKVNSSEPF-GSQ-ALHTM 93
           IK +   ++   G +DV VNNAA                    +N+      +Q A   M
Sbjct: 69  IKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLM 128

Query: 94  RTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM 153
             N                  G +V++SS                               
Sbjct: 129 EKN----------------GGGHIVSISSLGSIR-------------------------- 146

Query: 154 NEFVELAQDGSHTKGGWPNSA-YAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHP 209
                             N      +K  +  L+     L   LS   I     VN V  
Sbjct: 147 ---------------YLENYTTVGVSKAALEALT---RYLAVELSPKQII----VNAVSG 184

Query: 210 GYVNTDM 216
           G ++TD 
Sbjct: 185 GAIDTDA 191

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 71.1 bits (175), Expect = 4e-15
 Identities = 43/242 (17%), Positives = 75/242 (30%), Gaps = 85/242 (35%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHL 59
           +TGA++GIG G+V+    +     +  T+R      +        DI    +   +    
Sbjct: 33  ITGASQGIGAGLVRAYRDR--NYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREG 90

Query: 60  EAEHGGVDVLVNNAAIA----------------FKVNSSEPF-GSQA-LHTMRTNYFALI 101
               G +D LVNNA +                   VN +  F  +Q     M        
Sbjct: 91  IERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEM-------- 142

Query: 102 DVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQ 161
                   L +  G +V++++S                                      
Sbjct: 143 --------LKQGSGHIVSITTSLVD----------------------------------- 159

Query: 162 DGSHTKGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSS 218
                  G P++  + TK G+  ++    +L    S+  +R    VN V PG + T M  
Sbjct: 160 ---QPMVGMPSALASLTKGGLNAVT---RSLAMEFSRSGVR----VNAVSPGVIKTPMHP 209

Query: 219 GK 220
            +
Sbjct: 210 AE 211

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 71.1 bits (175), Expect = 4e-15
 Identities = 53/235 (22%), Positives = 83/235 (35%), Gaps = 70/235 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
           VTG+  GIG GI   L  Q   I+     DA+  ++    L             D+    
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS----QALHTMRTNYFALIDVCDI 106
           +++ L D+   + G +D+LVNNA I       E F +      L    +  F        
Sbjct: 69  AVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAA-- 125

Query: 107 LFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             P +  +  GR++N++S+ G +                                    S
Sbjct: 126 -LPHMKKQGFGRIINIASAHGLV-----------------------------------AS 149

Query: 165 HTKGGWPNSAYAATK---LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             K     SAY A K   +G TK++ L+ A      I      N + PG+V T +
Sbjct: 150 ANK-----SAYVAAKHGVVGFTKVTALETA---GQGIT----ANAICPGWVRTPL 192

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 71.1 bits (175), Expect = 5e-15
 Identities = 46/240 (19%), Positives = 79/240 (32%), Gaps = 76/240 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQ---------KLDIL 47
           VTG ++GIG  + +   +   G    + Y  A +       +  +            D+ 
Sbjct: 31  VTGGSRGIGAAVCRLAAR--QGWRVGVNY--AANREAADAVVAAITESGGEAVAIPGDVG 86

Query: 48  DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVC-D 105
           +   I A+   ++ + G +D LVNNA I       +    + +   +R N    I    +
Sbjct: 87  NAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAE 146

Query: 106 ILFPLLRSH----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQ 161
            +  + R +    G +VNVSS    L                                  
Sbjct: 147 AVRRMSRLYSGQGGAIVNVSSMAAIL---------------------------------- 172

Query: 162 DGSHTKGGWPN--SAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
                  G       YAA+K  +   +     L   ++ + IR    VN V PG + TD+
Sbjct: 173 -------GSATQYVDYAASKAAIDTFT---IGLAREVAAEGIR----VNAVRPGIIETDL 218

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 70.3 bits (173), Expect = 7e-15
 Identities = 40/224 (17%), Positives = 75/224 (33%), Gaps = 65/224 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHL 59
           V  A++GIG  +   L Q+  G  + + AR+    + +  +    D+      +   D L
Sbjct: 24  VLAASRGIGRAVADVLSQE--GAEVTICARNEELLKRSGHRYVVCDL------RKDLDLL 75

Query: 60  EAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL--RS 113
             +   VD+LV NA       F   ++E F  +A+ ++  N   ++       P +  + 
Sbjct: 76  FEKVKEVDILVLNAGGPKAGFFDELTNEDF-KEAIDSLFLNMIKIVRNY---LPAMKEKG 131

Query: 114 HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS 173
            GR+V ++S                                                 N 
Sbjct: 132 WGRIVAITSFSV-----------------------------------------ISPIENL 150

Query: 174 A-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               + ++ +T         LS +     + VNCV PG+  T+ 
Sbjct: 151 YTSNSARMALTGFL----KTLSFEVAPYGITVNCVAPGWTETER 190

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 70.2 bits (173), Expect = 7e-15
 Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 81/236 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL-QKLDILDKNSIKALHDH 58
           VTG ++GIG  I + L+ +  G  + + +R+     ++L  +    D L+K+  K L   
Sbjct: 7   VTGGSRGIGRAIAEALVAR--GYRVAIASRNPEEAAQSLGAVPLPTD-LEKDDPKGLVKR 63

Query: 59  LEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV-CDILFPLLRS--- 113
                GG+ VLV+ AA+  +         +    +    +  ++ +  D+ F L ++   
Sbjct: 64  ALEALGGLHVLVHAAAVNVR---------KPALELSYEEWRRVLYLHLDVAFLLAQAAAP 114

Query: 114 ------HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
                  GRV+ + S                +                        + T 
Sbjct: 115 HMAEAGWGRVLFIGS----------------VT-----------------------TFTA 135

Query: 168 GGWPN-SAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
           GG     AY   K  +   T+      AL    ++  IR    VN + PGYV T+ 
Sbjct: 136 GGPVPIPAYTTAKTALLGLTR------ALAKEWARLGIR----VNLLCPGYVETEF 181

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 70.2 bits (173), Expect = 8e-15
 Identities = 38/249 (15%), Positives = 84/249 (33%), Gaps = 82/249 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKL---------DILDKN 50
           +TG + G+G G+     ++  G  + +T R   + +EA  ++++          D+ + +
Sbjct: 11  ITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTD 68

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------ 103
            I+ + + ++ + G +D+L+NNAA  F               +  N + ++I++      
Sbjct: 69  DIQKMIEQIDEKFGRIDILINNAAGNFIC---------PAEDLSVNGWNSVINIVLNGTF 119

Query: 104 --CDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
                +          G ++N+ ++                                   
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYAW-------------------------------- 147

Query: 159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHA---LLSQDAIREDLVVNCVHPGYVNTD 215
                     G      AA K GV  L+  +        +  IR    VN + PG +   
Sbjct: 148 --------DAGPGVIHSAAAKAGV--LAMTKTLAVEWGRKYGIR----VNAIAPGPIERT 193

Query: 216 MSSGKGPLT 224
             + K  ++
Sbjct: 194 GGADKLWIS 202

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 70.6 bits (174), Expect = 8e-15
 Identities = 45/248 (18%), Positives = 77/248 (31%), Gaps = 96/248 (38%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           +TG++ G+G  +      +   ++             LE+++         K D+  ++ 
Sbjct: 12  ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIA----------------FKVNSSEPF-GSQ-ALHTM 93
           +  L      E G +DV++NNA +                    N +  F GS+ A+   
Sbjct: 72  VINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYF 131

Query: 94  RTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM 153
             N                  G V+N+SS    +                          
Sbjct: 132 VEN---------------DIKGTVINMSSVHEKI-------------------------- 150

Query: 154 NEFVELAQDGSHTKGGWPNSA-YAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCVH 208
                           WP    YAA+K G+   T+      AL  +   IR    VN + 
Sbjct: 151 ---------------PWPLFVHYAASKGGMKLMTETL----ALEYAPKGIR----VNNIG 187

Query: 209 PGYVNTDM 216
           PG +NT +
Sbjct: 188 PGAINTPI 195

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 50/229 (21%), Positives = 78/229 (34%), Gaps = 59/229 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTA--RDASRGQEALEK------LQKLDILD 48
           VTG + GIG        ++  G    I YL A   DA + +  +E+      L   D+ D
Sbjct: 54  VTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSD 111

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDIL 107
           ++  ++L        GG+D+L   A     +   +   S+    T   N FAL  +    
Sbjct: 112 ESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEA 171

Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
            PLL     ++  SS       + +      LL                           
Sbjct: 172 IPLLPKGASIITTSS-------IQAYQPSPHLL--------------------------- 197

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                  YAATK  +   S      +++  IR    VN V PG + T +
Sbjct: 198 ------DYAATKAAILNYSRGLAKQVAEKGIR----VNIVAPGPIWTAL 236

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 50/240 (20%), Positives = 76/240 (31%), Gaps = 63/240 (26%)

Query: 1   VTGANKGIGYGIVKGL------------IQQFDGIIYL--TARDASRGQEALEKL----- 41
           VTG  +G G      L                +   Y   T+RD       +EK      
Sbjct: 15  VTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAY 74

Query: 42  -QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFA 99
             ++D+ D+ ++     +  AE G +DV+V NA I            QA       ++  
Sbjct: 75  TAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC---PLGAHLPVQAFADAFDVDFVG 131

Query: 100 LIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
           +I+      P L S   ++   S  G                          L+      
Sbjct: 132 VINTVHAALPYLTSGASIITTGSVAG--------------------------LIAAAQPP 165

Query: 160 AQDGSHTKGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
              G    GG   + Y+  K  V   +     L   L+  +IR     N +HP  VNTDM
Sbjct: 166 GAGGPQGPGG---AGYSYAKQLVDSYT---LQLAAQLAPQSIR----ANVIHPTNVNTDM 215

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 44/236 (18%), Positives = 73/236 (30%), Gaps = 80/236 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
           VTGA  GIG   +    ++  G  +    R+     EA+  L         D+ D  +++
Sbjct: 11  VTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVE 68

Query: 54  ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV--------C 104
           A+      E G +  + + A +A          S     +    +  ++ V         
Sbjct: 69  AVFAEALEEFGRLHGVAHFAGVA---------HSALSWNLPLEAWEKVLRVNLTGSFLVA 119

Query: 105 DILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
                +L   G +V   S  G                                       
Sbjct: 120 RKAGEVLEEGGSLVLTGSVAG--------------------------------------- 140

Query: 165 HTKGGWPNSAYAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTDM 216
              G +  + YAA KLGV    +      AL L++  +R    VN + PG + T M
Sbjct: 141 --LGAFGLAHYAAGKLGVVGLAR----TLALELARKGVR----VNVLLPGLIQTPM 186

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 56/249 (22%), Positives = 79/249 (31%), Gaps = 97/249 (38%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTG  +GIG GI + L    FD  +    +   +  E ++ ++          LD+ DK 
Sbjct: 7   VTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKA 66

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIA----------------FKVNSSEPF-GSQA-LHT 92
           +  +  D    + GG DVLVNNA IA                + VN    F G QA    
Sbjct: 67  NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRK 126

Query: 93  MRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL 152
                             L   G+++N +S                              
Sbjct: 127 FDE---------------LGVKGKIINAASIAAIQ------------------------- 146

Query: 153 MNEFVELAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCV 207
                           G+P  SAY+ TK  V   T+ +    A  L+         VN  
Sbjct: 147 ----------------GFPILSAYSTTKFAVRGLTQAA----AQELAPKGHT----VNAY 182

Query: 208 HPGYVNTDM 216
            PG V T M
Sbjct: 183 APGIVGTGM 191

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 52/242 (21%), Positives = 86/242 (35%), Gaps = 84/242 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK-------------LDI 46
           +TGA+ GIG GI + L     G  I L AR  +R    +E +               LD+
Sbjct: 9   ITGASGGIGEGIARELGVA--GAKILLGARRQAR----IEAIATEIRDAGGTALAQVLDV 62

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL---HTM-RTNYFALID 102
            D++S+ A         G +DVLVNNA +        P  +  +     M   N   ++ 
Sbjct: 63  TDRHSVAAFAQAAVDTWGRIDVLVNNAGVM----PLSPLAAVKVDEWERMIDVNIKGVLW 118

Query: 103 VCDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
               + P++  +  G+++N+ S                                      
Sbjct: 119 GIGAVLPIMEAQRSGQIINIGSIGALSVV------------------------------- 147

Query: 161 QDGSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLV---VNCVHPGYVNTDM 216
                     P +A Y ATK  V  +S         D +R++     V CV+PG V +++
Sbjct: 148 ----------PTAAVYCATKFAVRAIS---------DGLRQESTNIRVTCVNPGVVESEL 188

Query: 217 SS 218
           + 
Sbjct: 189 AG 190

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 69.5 bits (171), Expect = 2e-14
 Identities = 49/249 (19%), Positives = 82/249 (32%), Gaps = 99/249 (39%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTGA +GIG  I   L++  DG  + +   + +  +    ++          K+D+ D++
Sbjct: 7   VTGAGQGIGKAIALRLVK--DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRD 64

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIA----------------FKVNSSEPF-GSQA-LHT 92
            + A  +      GG DV+VNNA +A                + +N      G QA +  
Sbjct: 65  QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 124

Query: 93  MRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL 152
            +                    G+++N  S  GH+                         
Sbjct: 125 FKK---------------EGHGGKIINACSQAGHV------------------------- 144

Query: 153 MNEFVELAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCV 207
                           G P  + Y+++K  V   T+ +    A  L+   I     VN  
Sbjct: 145 ----------------GNPELAVYSSSKFAVRGLTQTA----ARDLAPLGIT----VNGY 180

Query: 208 HPGYVNTDM 216
            PG V T M
Sbjct: 181 CPGIVKTPM 189

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 69.5 bits (171), Expect = 2e-14
 Identities = 44/243 (18%), Positives = 74/243 (30%), Gaps = 85/243 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ-----------KLDILD 48
           +TG   G+G      L  +  G  + L    +   + +   +              D+ D
Sbjct: 18  ITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 75

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV---- 103
           +  ++A         G +D   NNA I  K N           +     F  ++ +    
Sbjct: 76  EAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP--------TESFTAAEFDKVVSINLRG 127

Query: 104 ----CDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
                + +  ++R    G VVN +S  G                                
Sbjct: 128 VFLGLEKVLKIMREQGSGMVVNTASVGGIR------------------------------ 157

Query: 158 ELAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVN 213
                      G  N S YAA K GV   T+ S +++    +  IR    +N + PG + 
Sbjct: 158 -----------GIGNQSGYAAAKHGVVGLTRNSAVEYG---RYGIR----INAIAPGAIW 199

Query: 214 TDM 216
           T M
Sbjct: 200 TPM 202

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 69.2 bits (170), Expect = 2e-14
 Identities = 30/238 (12%), Positives = 66/238 (27%), Gaps = 66/238 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQK---------LDILDKN 50
           V GA   IG  I K    +  G  ++   R+  +    + +++          LD  +++
Sbjct: 12  VIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNED 69

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            + A  +  +A H  ++V + N          E              +A          L
Sbjct: 70  EVTAFLNAADA-HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARL 128

Query: 111 L--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           +     G++    ++                                             
Sbjct: 129 MLAHGQGKIFFTGATASLR----------------------------------------- 147

Query: 169 GWPN-SAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
           G    +A+A+ K G+  ++    ++   L    I    V + +    V+T     +  
Sbjct: 148 GGSGFAAFASAKFGLRAVA---QSMARELMPKNIH---VAHLIIDSGVDTAWVRERRE 199

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 69.1 bits (170), Expect = 2e-14
 Identities = 57/231 (24%), Positives = 85/231 (36%), Gaps = 66/231 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
           VTG+  GIG GI + L +    I+     D +     + +          D+ D   I+A
Sbjct: 9   VTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEA 68

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFG----SQALHTMRTNYFALIDVCDILFPL 110
           L    E E GGVD+LVNNA I   V   E F      + +    +  F    +     P 
Sbjct: 69  LFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGTRLA---LPG 124

Query: 111 L--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
           +  R+ GR++N++S  G +                                   GS  K 
Sbjct: 125 MRARNWGRIINIASVHGLV-----------------------------------GSTGK- 148

Query: 169 GWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               +AY A K GV   TK+  L+ A      +      N + PG+V T +
Sbjct: 149 ----AAYVAAKHGVVGLTKVVGLETA---TSNVT----CNAICPGWVLTPL 188

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 69.1 bits (170), Expect = 2e-14
 Identities = 42/244 (17%), Positives = 77/244 (31%), Gaps = 79/244 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTGA  GIG  I     +   G  + +T   +   +     ++         + ++ D+ 
Sbjct: 17  VTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQ 74

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
             +A+      + G + VLVNNA       F +     F        + N F+L  +  +
Sbjct: 75  HREAVIKAALDQFGKITVLVNNAGGGGPKPFDM-PMSDFEW----AFKLNLFSLFRLSQL 129

Query: 107 LFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             P ++    G ++N+SS  G                                       
Sbjct: 130 AAPHMQKAGGGAILNISSMAG--------------------------------------- 150

Query: 165 HTKGGWPNSAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDMSS 218
                   ++Y ++K  V   T+       +   +    IR    VN + PG + TD  +
Sbjct: 151 -ENTNVRMASYGSSKAAVNHLTR------NIAFDVGPMGIR----VNAIAPGAIKTDALA 199

Query: 219 GKGP 222
               
Sbjct: 200 TVLT 203

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 35/236 (14%), Positives = 63/236 (26%), Gaps = 77/236 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDI-LD 48
              A  GIG    + L+++   +      D      AL +L+             D+ + 
Sbjct: 10  FVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVP 67

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
               K L   +  +   VD+L+N A I    +  E        T+  N+  L++    + 
Sbjct: 68  VAESKKLLKKIFDQLKTVDILINGAGI-LDDHQIE-------RTIAINFTGLVNTTTAIL 119

Query: 109 PLLRSH-----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
                      G + N+ S  G                                      
Sbjct: 120 DFWDKRKGGPGGIIANICSVTGF------------------------------------- 142

Query: 164 SHTKGGWPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                      Y+A+K  V   T  S  +        +        ++PG   T +
Sbjct: 143 ---NAIHQVPVYSASKAAVVSFTN-SLAKL--APITGVT----AYSINPGITRTPL 188

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 72/236 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
           +TG+  GIG  I + L +    I+          +   +++             D+   +
Sbjct: 30  ITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPS 89

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS----QALHTMRTNYFALIDVCDI 106
            I  +   +    GG D+LVNNA +   V   E F      + +    ++ F  I     
Sbjct: 90  EIADMMAMVADRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGA-- 146

Query: 107 LFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             P ++    GR++N++S+ G +                                     
Sbjct: 147 -IPPMKKKGWGRIINIASAHGLV------------------------------------- 168

Query: 165 HTKGGWPN-SAYAATK---LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                 P  SAY A K   +G+TK   L+ A   +  +     VN + PGYV T +
Sbjct: 169 ----ASPFKSAYVAAKHGIMGLTKTVALEVA---ESGVT----VNSICPGYVLTPL 213

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 68.8 bits (169), Expect = 4e-14
 Identities = 45/244 (18%), Positives = 77/244 (31%), Gaps = 81/244 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           +TGA  GIG      L     G  +    R  +  +E  +++          + D+ D+ 
Sbjct: 33  ITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDEL 90

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------ 103
            ++     L  + G +D++V NA I      +  +    +  ++   +   I V      
Sbjct: 91  QMRNAVRDLVLKFGHLDIVVANAGI------NGVWAP--IDDLKPFEWDETIAVNLRGTF 142

Query: 104 --CDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
               +  P L+    G +V VSS  G                                  
Sbjct: 143 LTLHLTVPYLKQRGGGAIVVVSSING---------------------------------- 168

Query: 160 AQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
                      P  +AY ATK       +   L+     +  IR    VN V PG + T+
Sbjct: 169 -----TRTFTTPGATAYTATKAAQVAIVQQLALELG---KHHIR----VNAVCPGAIETN 216

Query: 216 MSSG 219
           +S  
Sbjct: 217 ISDN 220

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 68.4 bits (168), Expect = 4e-14
 Identities = 33/240 (13%), Positives = 63/240 (26%), Gaps = 87/240 (36%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEA---LEKLQKLDILDKNSIKALH 56
           VT      G G    L +   G  +        +  E     E   +L  + +     L 
Sbjct: 6   VTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELI 63

Query: 57  DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDI----LFPLLR 112
           + + + +G VDVLV+N   A +           +       +      +      F L+ 
Sbjct: 64  EAVTSAYGQVDVLVSNDIFAPEFQ--------PIDKYAVEDYR--GAVEALQIRPFALVN 113

Query: 113 S---------HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
           +          G ++ ++S+                                        
Sbjct: 114 AVASQMKKRKSGHIIFITSATPFG------------------------------------ 137

Query: 164 SHTKGGWPN-SAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
                 W   S Y + + G            AL   L +  I     V  + P Y++++ 
Sbjct: 138 -----PWKELSTYTSARAGACTLAN------ALSKELGEYNIP----VFAIGPNYLHSED 182

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 68.4 bits (168), Expect = 4e-14
 Identities = 31/227 (13%), Positives = 61/227 (26%), Gaps = 63/227 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQ----KLDILDKNSIKAL 55
           +TGA++ +G      L++      + ++ R        L +        D   +  I A 
Sbjct: 32  ITGASQRVGLHCALRLLEHGHR--VIISYRTEHASVTELRQAGAVALYGDFSCETGIMAF 89

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-- 113
            D L+ +   +  +V+NA+  +   +              +  A   +     PLL +  
Sbjct: 90  IDLLKTQTSSLRAVVHNASE-WLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE 148

Query: 114 HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS 173
              +V++S                                               G    
Sbjct: 149 VADIVHISDDVTRK-----------------------------------------GSSKH 167

Query: 174 A-YAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             Y ATK G+   T              ++    VN + P  +    
Sbjct: 168 IAYCATKAGLESLTLS--FAARFAPL--VK----VNGIAPALLMFQP 206

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 68.4 bits (168), Expect = 5e-14
 Identities = 44/233 (18%), Positives = 77/233 (33%), Gaps = 67/233 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQK----------LDILDK 49
           +TG   GIG+ I +  ++   G    + +R   R   A  KL            +D+   
Sbjct: 32  ITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP 89

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILF 108
            ++ A  D    E G +D+L+N AA  F +  +      A  T M  +     +V  +L+
Sbjct: 90  PAVMAAVDQALKEFGRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLY 148

Query: 109 P-LLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
               R H G +VN++++ G+                                        
Sbjct: 149 EKFFRDHGGVIVNITATLGN---------------------------------------- 168

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNCVHPGYVNTDM 216
           +G        + K  V  ++     L        IR    VN + PG ++   
Sbjct: 169 RGQALQVHAGSAKAAVDAMT---RHLAVEWGPQNIR----VNSLAPGPISGTE 214

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 68.3 bits (168), Expect = 5e-14
 Identities = 42/241 (17%), Positives = 69/241 (28%), Gaps = 83/241 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTGA  GIG  I K         I+        R  + +++L+         K D+  K 
Sbjct: 12  VTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKK 69

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------ 103
            ++         +  +DVL NNA I   V          +  +    +  ++ V      
Sbjct: 70  DVEEFVRRTFETYSRIDVLCNNAGIMDGVTP--------VAEVSDELWERVLAVNLYSAF 121

Query: 104 --CDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
                + P++     G +VN +S  G                                  
Sbjct: 122 YSSRAVIPIMLKQGKGVIVNTASIAGIR-------------------------------- 149

Query: 160 AQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
                    G    + Y   K G+   T+     +       IR       V PG V T+
Sbjct: 150 ---------GGFAGAPYTVAKHGLIGLTRSIAAHYG---DQGIR----AVAVLPGTVKTN 193

Query: 216 M 216
           +
Sbjct: 194 I 194

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 68.4 bits (168), Expect = 6e-14
 Identities = 51/246 (20%), Positives = 72/246 (29%), Gaps = 92/246 (37%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----------KLDILDK 49
           VTG  KGIG GI     +   G  + + AR          +L           +LD+ D 
Sbjct: 46  VTGGTKGIGRGIATVFARA--GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDP 103

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV----- 103
            S       +    G +DV+  NA I         F    L TM       ++DV     
Sbjct: 104 GSCADAARTVVDAFGALDVVCANAGI---------FPEARLDTMTPEQLSEVLDVNVKGT 154

Query: 104 --C--DILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
                  L PL  S  GRV+  SS  G +                               
Sbjct: 155 VYTVQACLAPLTASGRGRVILTSSITGPV------------------------------- 183

Query: 159 LAQDGSHTKG--GWPNSAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPG 210
                    G  GW +  Y A+K       +           L+   +     VN + PG
Sbjct: 184 --------TGYPGWSH--YGASKAAQLGFMR------TAAIELAPRGVT----VNAILPG 223

Query: 211 YVNTDM 216
            + T+ 
Sbjct: 224 NILTEG 229

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 68.4 bits (168), Expect = 6e-14
 Identities = 49/244 (20%), Positives = 78/244 (31%), Gaps = 84/244 (34%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG  +GIG GI + L      I      DA      + +L          + D+ D +S
Sbjct: 34  VTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSS 93

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------- 103
            +A  D + AE G +D LVNNA IA                ++   F  ++ V       
Sbjct: 94  HQATVDAVVAEFGRIDCLVNNAGIA-------SIVRDDFLDLKPENFDTIVGVNLRGTVF 146

Query: 104 C------DILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
                   +L    R+   ++N++S    +                              
Sbjct: 147 FTQAVLKAMLASDARASRSIINITSVSAVM------------------------------ 176

Query: 158 ELAQDGSHTKGGWPNSA-YAATKLGV---TKLSFLQHAL-LSQDAIREDLVVNCVHPGYV 212
                        P    Y  +K G+   ++      AL L++  I     V  V PG +
Sbjct: 177 -----------TSPERLDYCMSKAGLAAFSQGL----ALRLAETGIA----VFEVRPGII 217

Query: 213 NTDM 216
            +DM
Sbjct: 218 RSDM 221

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 67.9 bits (167), Expect = 6e-14
 Identities = 45/247 (18%), Positives = 71/247 (28%), Gaps = 98/247 (39%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
           +TG   GIG  I +    +   I       A   + A+  L       K D+     ++A
Sbjct: 12  ITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEA 71

Query: 55  LHDHLEAEHGGVDVLVNNAAIA----------------FKVNSSEPF-GSQA-LHTMRTN 96
               + +  G  D+LVNNA I                 F++N    F  ++A +  M+  
Sbjct: 72  FGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR- 130

Query: 97  YFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF 156
                             GR++N++S+   L                             
Sbjct: 131 ---------------NGWGRIINLTSTTYWL----------------------------- 146

Query: 157 VELAQDGSHTKGGWPNSA-YAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHP 209
                              Y +TK      T+      AL   L +D I     VN + P
Sbjct: 147 ------------KIEAYTHYISTKAANIGFTR------ALASDLGKDGIT----VNAIAP 184

Query: 210 GYVNTDM 216
             V T  
Sbjct: 185 SLVRTAT 191

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 42/244 (17%), Positives = 71/244 (29%), Gaps = 87/244 (35%)

Query: 1   VTGA-NKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----------KLDILD 48
           VT A   GIG    +  + +  G  + ++     R  E  ++L             D+  
Sbjct: 27  VTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS 84

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV---- 103
             ++ AL      + G +DVLVNNA +          G   +  M    +  +++V    
Sbjct: 85  TEAVDALITQTVEKAGRLDVLVNNAGLG---------GQTPVVDMTDEEWDRVLNVTLTS 135

Query: 104 ----CDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF 156
                       R     G +VN +S  G                               
Sbjct: 136 VMRATRAALRYFRGVDHGGVIVNNASVLGWR----------------------------- 166

Query: 157 VELAQDGSHTKGGWPNSA-YAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYV 212
                          + + YAA K GV   T+ S ++     +  +R    +N V P   
Sbjct: 167 ------------AQHSQSHYAAAKAGVMALTRCSAIEAV---EFGVR----INAVSPSIA 207

Query: 213 NTDM 216
               
Sbjct: 208 RHKF 211

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 66.4 bits (163), Expect = 2e-13
 Identities = 43/247 (17%), Positives = 75/247 (30%), Gaps = 76/247 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           +TG+++GIG    +   +    +     +  +   E +  ++           D+    +
Sbjct: 12  ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEA 71

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVN-----SSEPFGSQALHTMRTNYFALIDVCDI 106
            + L D   A+ GG+DVL+NNA                + +     M  N  +++     
Sbjct: 72  CQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDA----VMDANIRSVVMTTKF 127

Query: 107 LFPLLRSH-------GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
             P L +          V++  S  GH                                 
Sbjct: 128 ALPHLAAAAKASGQTSAVISTGSIAGH--------------------------------- 154

Query: 160 AQDGSHTKGGWPNSA-YAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
                   GG P +  Y A K  +    K     H    +D +R     N V PG V+T 
Sbjct: 155 -------TGGGPGAGLYGAAKAFLHNVHKNWVDFHT---KDGVR----FNIVSPGTVDTA 200

Query: 216 MSSGKGP 222
             + K  
Sbjct: 201 FHADKTQ 207

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 50/246 (20%), Positives = 78/246 (31%), Gaps = 92/246 (37%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTG + GIG  + + L  +  G  +Y  ARDA     A++ L+           D+   +
Sbjct: 29  VTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTD 86

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALID------- 102
            + A         G + +LVN+A            G      +    +  ++D       
Sbjct: 87  EVHAAVAAAVERFGPIGILVNSAGRN---------GGGETADLDDALWADVLDTNLTGVF 137

Query: 103 -----VCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
                V           GR+VN++S+ G                                
Sbjct: 138 RVTREVLRAGGMREAGWGRIVNIASTGGKQ------------------------------ 167

Query: 158 ELAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCVHPG 210
                      G    + Y A+K GV   TK      ++   L++  I     VN V PG
Sbjct: 168 -----------GVMYAAPYTASKHGVVGFTK------SVGFELAKTGIT----VNAVCPG 206

Query: 211 YVNTDM 216
           YV T M
Sbjct: 207 YVETPM 212

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 66.5 bits (163), Expect = 3e-13
 Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 96/249 (38%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ--------------KLD 45
           VTG   GIG  IVK L++   G  + + +R   R + A ++LQ              + +
Sbjct: 23  VTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 80

Query: 46  ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV- 103
           I ++  +  L        G ++ LVNN    F               + +  + A+++  
Sbjct: 81  IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF---------LSPAEHISSKGWHAVLETN 131

Query: 104 -------CDILFP-LLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN 154
                  C  ++   ++ H G +VN+                                  
Sbjct: 132 LTGTFYMCKAVYSSWMKEHGGSIVNIIVP------------------------------- 160

Query: 155 EFVELAQDGSHTKGGWPNSA-YAATKLGV---TKLSFLQHAL---LSQDAIREDLVVNCV 207
                      TK G+P +    A + GV   TK      +L    +   IR    +NCV
Sbjct: 161 -----------TKAGFPLAVHSGAARAGVYNLTK------SLALEWACSGIR----INCV 199

Query: 208 HPGYVNTDM 216
            PG + +  
Sbjct: 200 APGVIYSQT 208

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 35/241 (14%), Positives = 67/241 (27%), Gaps = 76/241 (31%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLT----ARDASRGQEALEKLQKL-------- 44
           ++G ++GIG  I K +    DG    ++  +     +       A +++++         
Sbjct: 14  ISGGSRGIGLAIAKRVAA--DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIV 71

Query: 45  -DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFA 99
            DI D +++ A       + GG+D+ VNNA+               L             
Sbjct: 72  GDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN----LGSIEEVPLKRFDLMNGIQVRG 127

Query: 100 LIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
              V     P ++   +  ++ +S                                    
Sbjct: 128 TYAVSQSCIPHMKGRDNPHILTLSPPIRL------------------------------- 156

Query: 158 ELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTD 215
                    +  W   + Y   K G+T  + L  A  L    I      N + P      
Sbjct: 157 ---------EPKWLRPTPYMMAKYGMTLCA-LGIAEELRDAGIA----SNTLWPRTTVAT 202

Query: 216 M 216
            
Sbjct: 203 A 203

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 66.0 bits (162), Expect = 4e-13
 Identities = 51/238 (21%), Positives = 84/238 (35%), Gaps = 66/238 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLT-ARDASRGQEALEK------LQKLDILDK 49
           +TG + GIG  +     ++  G    I YL    DA+  ++ +EK      L   D+ D+
Sbjct: 52  ITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDE 109

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDILF 108
              K +      + G +++LVNN A  +     E   ++ L  T R N F+   V     
Sbjct: 110 QHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAAL 169

Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
             L+    ++N +S       + +    + L+                            
Sbjct: 170 SHLKQGDVIINTAS-------IVAYEGNETLI---------------------------- 194

Query: 169 GWPNSAYAATKLGV---TK-LSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
                 Y+ATK  +   T+ LS      L Q  IR    VN V PG + T +      
Sbjct: 195 -----DYSATKGAIVAFTRSLS----QSLVQKGIR----VNGVAPGPIWTPLIPSSFD 239

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 64.5 bits (158), Expect = 1e-12
 Identities = 37/239 (15%), Positives = 68/239 (28%), Gaps = 78/239 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ--------KLDILDKNS 51
           +TG   GIG    K  ++   G  + +       GQ+    +           D+     
Sbjct: 21  ITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDED 78

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-ALIDV------- 103
           ++ L D   A+HG +D++  N  +             ++       F  ++D+       
Sbjct: 79  VRNLVDTTIAKHGKLDIMFGNVGVL-------STTPYSILEAGNEDFKRVMDINVYGAFL 131

Query: 104 -CDILFPLLRSHGR--VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
                  ++    +  +V  +S                                      
Sbjct: 132 VAKHAARVMIPAKKGSIVFTASISSFTA-------------------------------- 159

Query: 161 QDGSHTKGGWPNSAYAATK---LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                  G   +  Y ATK   LG+T     +     +  IR    VNCV P  V + +
Sbjct: 160 -------GEGVSHVYTATKHAVLGLTTSLCTELG---EYGIR----VNCVSPYIVASPL 204

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
          VTG N+GIG  I + L      +  +T R +   +       ++D+ D +++      +E
Sbjct: 20 VTGGNRGIGLAIAQRLAADGHKVA-VTHRGSGAPKGLFGV--EVDVTDSDAVDRAFTAVE 76

Query: 61 AEHGGVDVLVNNAAI 75
             G V+VLV+NA +
Sbjct: 77 EHQGPVEVLVSNAGL 91

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 63.3 bits (155), Expect = 2e-12
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
          VTG N+GIG  I +      D +  +T R     +  L    K DI D   ++  +  +E
Sbjct: 26 VTGGNRGIGLAIARAFADAGDKVA-ITYRSGEPPEGFLAV--KCDITDTEQVEQAYKEIE 82

Query: 61 AEHGGVDVLVNNAAI 75
            HG V+VL+ NA +
Sbjct: 83 ETHGPVEVLIANAGV 97

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 62.9 bits (154), Expect = 3e-12
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 10/84 (11%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
          VTGA++GIG+ +   L  +   ++  TA   +  ++    ++          L+I D  S
Sbjct: 10 VTGASRGIGFEVAHALASKGATVV-GTATSQASAEKFENSMKEKGFKARGLVLNISDIES 68

Query: 52 IKALHDHLEAEHGGVDVLVNNAAI 75
          I+     ++AE+  +D+LVNNA I
Sbjct: 69 IQNFFAEIKAENLAIDILVNNAGI 92

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 44/256 (17%), Positives = 66/256 (25%), Gaps = 92/256 (35%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARD----------ASRGQEALEKLQKLDI 46
           +TG  + IG+ I   L Q   G    + Y  +            A+R   A+  L K D+
Sbjct: 16  ITGGARRIGHSIAVRLHQ--QGFRVVVHYRHSEGAAQRLVAELNAARAGSAV--LCKGDL 71

Query: 47  LDKNSI----KALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYF-A 99
              +S+    + + D      G  DVLVNNA+  +   +   +     A           
Sbjct: 72  SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131

Query: 100 LIDV-------C--------DILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK 144
           L                            +  VVN+                        
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD---------------------- 169

Query: 145 SVEELSALMNEFVELAQDGSHTKGGWPNSA-YAATKLGVTKLSFLQHAL---LSQDAIRE 200
                              + T    P    Y   K  +  L+    A    L+   IR 
Sbjct: 170 -------------------AMTDLPLPGFCVYTMAKHALGGLT---RAAALELAPRHIR- 206

Query: 201 DLVVNCVHPGYVNTDM 216
              VN V PG      
Sbjct: 207 ---VNAVAPGLSLLPP 219

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 62.5 bits (153), Expect = 5e-12
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 1  VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----KLDILDKNSIKAL 55
          +TGA  GIG   ++   ++  G  +     +    +EA E +      +D+ D  S++  
Sbjct: 10 ITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERG 67

Query: 56 HDHLEAEHGGVDVLVNNAAI 75
               A  G +D +V+ A I
Sbjct: 68 FAEALAHLGRLDGVVHYAGI 87

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 62.6 bits (153), Expect = 6e-12
 Identities = 35/241 (14%), Positives = 70/241 (29%), Gaps = 74/241 (30%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQ-------------K 43
           +TGA++GIG  I     +  DG    I   +A    +    +                 K
Sbjct: 11  ITGASRGIGLAIALRAAR--DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALK 68

Query: 44  LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFA 99
            DI +++ ++A         GG+D+LVNNA+  +            +       + N   
Sbjct: 69  CDIREEDQVRAAVAATVDTFGGIDILVNNASAIW----LRGTLDTPMKRFDLMQQVNARG 124

Query: 100 LIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV 157
                    P L    +  ++ ++                                    
Sbjct: 125 SFVCAQACLPHLLQAPNPHILTLAPPPSL------------------------------- 153

Query: 158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHAL-LSQDAIREDLVVNCVHPG-YVNTD 215
                  +      ++ Y   K+G++ ++ L  A       +     +N + P   + TD
Sbjct: 154 -------NPAWWGAHTGYTLAKMGMSLVT-LGLAAEFGPQGVA----INALWPRTVIATD 201

Query: 216 M 216
            
Sbjct: 202 A 202

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 62.6 bits (153), Expect = 6e-12
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTGA  GIG  I +    Q   I+ L      + +E    L         ++ D+ SIK 
Sbjct: 32  VTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQ 90

Query: 55  LHDHLEAEHGGVDVLVNNAAI 75
           L +  E E  G+D+LVNNA I
Sbjct: 91  LAEVAEREMEGIDILVNNAGI 111

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 62.2 bits (152), Expect = 8e-12
 Identities = 46/253 (18%), Positives = 75/253 (29%), Gaps = 94/253 (37%)

Query: 1   VTGANKGIGYGIVKGL------------IQQFDGIIYLTARDASRGQEALEKLQKL---- 44
           +TGA +G G      +              +    +           E +  ++      
Sbjct: 16  ITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRI 75

Query: 45  -----DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF- 98
                D  D + ++ + D   A  G +D++V NA +A           QA   +    F 
Sbjct: 76  VAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA---------APQAWDDITPEDFR 126

Query: 99  ALIDV--------CDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE 147
            ++D+             P +      G ++ +SS+ G                      
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK-------------------- 166

Query: 148 ELSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHAL---LSQDAIREDLV 203
                                  P    Y A+K  VT L+    A    L + +IR    
Sbjct: 167 ---------------------MQPFMIHYTASKHAVTGLA---RAFAAELGKHSIR---- 198

Query: 204 VNCVHPGYVNTDM 216
           VN VHPG VNT M
Sbjct: 199 VNSVHPGPVNTPM 211

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 61.7 bits (151), Expect = 1e-11
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
          VTGA++GIG  I + L ++   +I  TA   S  Q   + L        L++ +  SI+A
Sbjct: 14 VTGASRGIGKAIAELLAERGAKVI-GTATSESGAQAISDYLGDNGKGMALNVTNPESIEA 72

Query: 55 LHDHLEAEHGGVDVLVNNAAI 75
          +   +  E GGVD+LVNNA I
Sbjct: 73 VLKAITDEFGGVDILVNNAGI 93

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 46/255 (18%), Positives = 76/255 (29%), Gaps = 94/255 (36%)

Query: 1   VTGANKGIGYGI---------------VKGLIQQFDGIIYLTARDASRGQEALEKLQKL- 44
           VTGA +G G                  +   I+       + A       E  + ++   
Sbjct: 16  VTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN 75

Query: 45  --------DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTN 96
                   D+ D +++KA  D    + G +D++V NA I    ++ +    +    M   
Sbjct: 76  RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEM--- 132

Query: 97  YFALIDV--------CDILFPLLRSHGR---VVNVSSSCGHLCHVTSEALKKKLLHEIKS 145
               ID+             P + + GR   ++  SS  G                    
Sbjct: 133 ----IDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK------------------ 170

Query: 146 VEELSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGV---TKLSFLQHALLSQDAIRED 201
                                   +P+   Y A K GV    +   ++     Q  IR  
Sbjct: 171 -----------------------AYPHTGHYVAAKHGVVGLMRAFGVELG---QHMIR-- 202

Query: 202 LVVNCVHPGYVNTDM 216
             VN VHP +V T M
Sbjct: 203 --VNSVHPTHVKTPM 215

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 61.4 bits (150), Expect = 1e-11
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 13/86 (15%)

Query: 1  VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----------KLDILDK 49
          VTG+ +GIG  I + L     G  + +T     R +   E++           ++++L +
Sbjct: 12 VTGSTRGIGRAIAEKLASA--GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE 69

Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAI 75
           SI    + +     G+D+LVNNA I
Sbjct: 70 ESINKAFEEIYNLVDGIDILVNNAGI 95

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 61.0 bits (149), Expect = 2e-11
 Identities = 41/242 (16%), Positives = 73/242 (30%), Gaps = 75/242 (30%)

Query: 1   VTGA--NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILD 48
           VTGA   KG+G    +G  +    +    A  A   +E +++L+          K  +  
Sbjct: 25  VTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDS 84

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNY---FALIDVCD 105
             S + L   + A+ G +D  + NA         +       H ++ +    F       
Sbjct: 85  YESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVG 144

Query: 106 ILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
             F   R  G +V  +S  GH+                                      
Sbjct: 145 HHF-KERGTGSLVITASMSGHI-------------------------------------- 165

Query: 166 TKGGWPN--SAYAATKLGVTKLS------FLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
               +P   ++Y   K G   ++      +           R    VN + PGY++T +S
Sbjct: 166 --ANFPQEQTSYNVAKAGCIHMARSLANEWRDF-------AR----VNSISPGYIDTGLS 212

Query: 218 SG 219
             
Sbjct: 213 DF 214

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 47/251 (18%), Positives = 79/251 (31%), Gaps = 92/251 (36%)

Query: 1   VTGANKGIGYG------------IVKGLIQQFDGIIYL--TARDASRGQEALEKL----- 41
           +TG  +G+G               +    +  D + Y   TA D +     +EK      
Sbjct: 15  ITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCI 74

Query: 42  -QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-A 99
             K+D+ D+ ++++     E   GG+D+ + NA I+             L  + +  +  
Sbjct: 75  SAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS---------TIALLPEVESAQWDE 125

Query: 100 LIDV--------CDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL 149
           +I             + P +  R++GR+V VSS  G                        
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG------------------------ 161

Query: 150 SALMNEFVELAQDGSHTKGGWPNSA-YAATKLGVTKLSFLQHAL---LSQDAIREDLVVN 205
                                   A Y ++K GV  L+         L    I     VN
Sbjct: 162 --HS---------------ANFAQASYVSSKWGVIGLT---KCAAHDLVGYGIT----VN 197

Query: 206 CVHPGYVNTDM 216
            V PG + T M
Sbjct: 198 AVAPGNIETPM 208

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 12/85 (14%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ---------KLDILDKN 50
           VTGA  GIG  I + L ++  G  +++ AR     +  L++L+           D+    
Sbjct: 27  VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAI 75
            I+AL   +   +G VDVLVNNA  
Sbjct: 85  EIEALVAAVVERYGPVDVLVNNAGR 109

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 61.0 bits (149), Expect = 2e-11
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA++GIG  I   L ++   +I  TA   +  +      +          L++ D  +
Sbjct: 33  VTGASRGIGRAIALELARRGAMVI-GTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATA 91

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI 75
           + AL +    E G ++VLVNNA I
Sbjct: 92  VDALVESTLKEFGALNVLVNNAGI 115

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 60.7 bits (148), Expect = 3e-11
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 10/84 (11%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA +GIG  I K L +    +I   +R        +++++           D+  K  
Sbjct: 49  VTGAGRGIGREIAKMLAKSVSHVI-CISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEE 107

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI 75
           I  + + +  EH  VD+LVNNA I
Sbjct: 108 ISEVINKILTEHKNVDILVNNAGI 131

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 60.2 bits (147), Expect = 3e-11
 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
          VTGA++GIG  I   L +Q   ++   A +  +  E +++++         + D+ +   
Sbjct: 9  VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAED 68

Query: 52 IKALHDHLEAEHGGVDVLVNNAAI 75
          +  +        G VD+LVNNA +
Sbjct: 69 VTNMVKQTVDVFGQVDILVNNAGV 92

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 60.2 bits (147), Expect = 3e-11
 Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
          VTGA++GIG  I   L ++   +    A    + +  +E+++         + ++ D + 
Sbjct: 9  VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADE 68

Query: 52 IKALHDHLEAEHGGVDVLVNNAAI 75
          +KA+   + ++ G +DVLVNNA I
Sbjct: 69 VKAMIKEVVSQFGSLDVLVNNAGI 92

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 60.2 bits (147), Expect = 3e-11
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 1  VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL------QKLDILDKNSIK 53
          VTGA +GIG  I   L     G  + ++  +A   + A   +         DI D  S+K
Sbjct: 11 VTGAAQGIGKAIAARLAAD--GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVK 68

Query: 54 ALHDHLEAEHGGVDVLVNNAAI 75
          AL   ++A  GG+D+LVNNA+I
Sbjct: 69 ALFAEIQALTGGIDILVNNASI 90

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 59.8 bits (146), Expect = 4e-11
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
          +TGA++GIG  I   L +    +     ++  + +E  E+ +            ++L+  
Sbjct: 6  ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAE 65

Query: 51 SIKALHDHLEAEHGGVDVLVNNAAI 75
          +  AL        GG+D LVNNA I
Sbjct: 66 AATALVHQAAEVLGGLDTLVNNAGI 90

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 59.8 bits (146), Expect = 4e-11
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
          VTGA++GIG  I   L +    ++   AR A   +E  ++++           D+  +  
Sbjct: 6  VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEAD 65

Query: 52 IKALHDHLEAEHGGVDVLVNNAAI 75
          ++A+        G +DV+VNNA I
Sbjct: 66 VEAMMKTAIDAWGTIDVVVNNAGI 89

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 59.4 bits (145), Expect = 5e-11
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
          VTG+++G+G  I   L      I+   +  ++      E+ +         K D+ +   
Sbjct: 10 VTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPED 69

Query: 52 IKALHDHLEAEHGGVDVLVNNAAI 75
          ++ +        G +D+LVNNA I
Sbjct: 70 VENMVKTAMDAFGRIDILVNNAGI 93

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 59.5 bits (145), Expect = 6e-11
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 9/84 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTGA++GIG  I   L      +    A  A    E +  +          K D+  ++ 
Sbjct: 33  VTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESE 92

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI 75
           ++AL   +    G +DVLVNNA I
Sbjct: 93  VEALFAAVIERWGRLDVLVNNAGI 116

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 59.1 bits (144), Expect = 7e-11
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG   GIG  I + L +    ++     ++ R  + LE  +         + ++ D +S
Sbjct: 18  VTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDS 77

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI 75
            K   D ++AE G +DVLVNNA I
Sbjct: 78  TKQAFDKVKAEVGEIDVLVNNAGI 101

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 59.1 bits (144), Expect = 9e-11
 Identities = 45/253 (17%), Positives = 72/253 (28%), Gaps = 94/253 (37%)

Query: 1   VTGANKGIGYG------------IVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---- 44
           +TGA +G G              I   +       +           E    ++      
Sbjct: 20  ITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKA 79

Query: 45  -----DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF- 98
                D+ D  +++ L      + G +DV+V NA +              +  +    + 
Sbjct: 80  LTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL---------SWGRVWELTDEQWD 130

Query: 99  ALIDV--------CDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE 147
            +I V             P +      G +V VSSS G                      
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG---------------------- 168

Query: 148 ELSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHAL---LSQDAIREDLV 203
               L                  P    Y+A+K G+T L+   + L   L +  IR    
Sbjct: 169 ----LK---------------ATPGNGHYSASKHGLTALT---NTLAIELGEYGIR---- 202

Query: 204 VNCVHPGYVNTDM 216
           VN +HP  V T M
Sbjct: 203 VNSIHPYSVETPM 215

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 52/250 (20%), Positives = 84/250 (33%), Gaps = 89/250 (35%)

Query: 1   VTGANKGIGYG------------IVKGLIQQFDGIIYL--TARDASRGQEALEKL----- 41
           +TGA +G G              +   L +Q   + Y   +  +       +E+      
Sbjct: 51  ITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRII 110

Query: 42  -QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFAL 100
            ++ D+ D  S++A+ D   AE G +D+LV+N  I+           Q    +       
Sbjct: 111 ARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQQWSDI------- 162

Query: 101 IDV--------CDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL 149
           +          C  + P +      G V+ VSS+ G                        
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG------------------------ 198

Query: 150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLVVNC 206
                            +G    S YAA+K GV  L     +L   + +  IR    VN 
Sbjct: 199 ----------------LRGAPGQSHYAASKHGVQGLM---LSLANEVGRHNIR----VNS 235

Query: 207 VHPGYVNTDM 216
           V+PG VNT+M
Sbjct: 236 VNPGAVNTEM 245

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 59.1 bits (143), Expect = 1e-10
 Identities = 46/248 (18%), Positives = 77/248 (31%), Gaps = 65/248 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQ----------------FDGIIYLTARD-ASRGQEALEKLQK 43
           +TGA++GIG  I     +                   G IY  A +  + G +AL     
Sbjct: 50  ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKAL--PCI 107

Query: 44  LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV 103
           +D+ D+  I A  +    + GG+D+LVNNA+     N+ +    +    M  N       
Sbjct: 108 VDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLA 167

Query: 104 CDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQ 161
                P L+      ++N+S                                        
Sbjct: 168 SKACIPYLKKSKVAHILNISPPL------------------------------------- 190

Query: 162 DGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGY-VNTDMSSGK 220
              +      + AY   K G++    L  A   +  I     VN + P   ++T      
Sbjct: 191 -NLNPVWFKQHCAYTIAKYGMSMYV-LGMAEEFKGEIA----VNALWPKTAIHTAAMDML 244

Query: 221 GPLTIDQD 228
           G   I+  
Sbjct: 245 GGPGIESQ 252

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 52/252 (20%), Positives = 83/252 (32%), Gaps = 92/252 (36%)

Query: 1   VTGANKGIGYG------------IVKGLIQQFDGIIY--LTARDASRGQEALEKL----- 41
           +TGA +G G              I   + +Q DG+     T  D +     +E L     
Sbjct: 33  ITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRII 92

Query: 42  -QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF-A 99
             ++D+ D ++++A  D    + G +D+++ NAA+A         G+  L+ M    +  
Sbjct: 93  ASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALA-------SEGT-RLNRMDPKTWRD 144

Query: 100 LIDV--------CDILFPLL---RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE 148
           +IDV          +  P +   +  G +V  SS  G                       
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR--------------------- 183

Query: 149 LSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHAL---LSQDAIREDLVV 204
                               G  N   Y A+K G+  L      +   L    IR    V
Sbjct: 184 --------------------GAENIGNYIASKHGLHGLM---RTMALELGPRNIR----V 216

Query: 205 NCVHPGYVNTDM 216
           N V P  V T M
Sbjct: 217 NIVCPSSVATPM 228

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 57.2 bits (139), Expect = 5e-10
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG   G+G  I + L      +    +         L   +          +D+ D  S
Sbjct: 30  VTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFES 89

Query: 52  IKALHDHLEAEHGGVDVLVNNAAI 75
            +   + + A+ G VDVL+NNA I
Sbjct: 90  CERCAEKVLADFGKVDVLINNAGI 113

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 56.7 bits (138), Expect = 5e-10
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 11/81 (13%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
          +TGA+ GIG  I + L +     + ++  +  + +     L+        ++ +K     
Sbjct: 19 ITGASSGIGSAIARLLHKL-GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSN 77

Query: 55 LHDHLEAEHGGVDVLVNNAAI 75
          L      +   +D+LV NA I
Sbjct: 78 LIS----KTSNLDILVCNAGI 94

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 56.9 bits (138), Expect = 6e-10
 Identities = 42/254 (16%), Positives = 65/254 (25%), Gaps = 86/254 (33%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
           VTGA K IG  I   L Q    ++      A       ++L           + D+ + N
Sbjct: 28  VTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSN 87

Query: 51  ----SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYF---ALIDV 103
               S + + +      G  DVLVNNA+  F          +     +T       LI  
Sbjct: 88  VLPASCEEIINSCFRAFGRCDVLVNNASA-FYPTPLVQGDHEDNSNGKTVETQVAELIGT 146

Query: 104 ----------------CDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE 147
                                    S+  +VN+                           
Sbjct: 147 NAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD------------------------- 181

Query: 148 ELSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHAL---LSQDAIREDLV 203
                           +         S Y   K  +  L+    +    L+   IR    
Sbjct: 182 ----------------AMVDQPCMAFSLYNMGKHALVGLT---QSAALELAPYGIR---- 218

Query: 204 VNCVHPGYVNTDMS 217
           VN V PG     ++
Sbjct: 219 VNGVAPGVSLLPVA 232

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 56.4 bits (137), Expect = 7e-10
 Identities = 53/253 (20%), Positives = 78/253 (30%), Gaps = 95/253 (37%)

Query: 1   VTGANKGIG---------YG---IVKGLIQQFDGIIYL--TARDASRGQEALEKL----- 41
           +TGA +G G          G   I   L  Q   + Y   T  + +   + +E +     
Sbjct: 18  ITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIV 77

Query: 42  -QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRT---NY 97
            ++ D+ D+ S+ A       E G +D++V NA IA                M      +
Sbjct: 78  ARQADVRDRESLSAALQAGLDELGRLDIVVANAGIA---------------PMSAGDDGW 122

Query: 98  FALIDV--------CDILFPLL---RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV 146
             +IDV          +  P L    + G +V +SSS G                 +  V
Sbjct: 123 HDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG-----------------LAGV 165

Query: 147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHAL---LSQDAIREDLV 203
                                       Y A K GV  L          L+   IR    
Sbjct: 166 GSADPGS-------------------VGYVAAKHGVVGLM---RVYANLLAGQMIR---- 199

Query: 204 VNCVHPGYVNTDM 216
           VN +HP  V T M
Sbjct: 200 VNSIHPSGVETPM 212

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.6 bits (138), Expect = 8e-10
 Identities = 45/227 (19%), Positives = 70/227 (30%), Gaps = 56/227 (24%)

Query: 14  KGLIQQFD-GIIYLTARDASRGQEALEKLQKL-----------------DILDKNSIKAL 55
             +  + D  I +L  ++ +  +  LE LQKL                   L  +SI+A 
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233

Query: 56  HDHLEAEHGGVDVL-----VNNAAI--AFKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
              L       + L     V NA    AF          + L T R        V D L 
Sbjct: 234 LRRLLKSKPYENCLLVLLNVQNAKAWNAFN------LSCKILLTTRF-----KQVTDFLS 282

Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEAL--------KKKLLHEIKSVEELSALMNEFVELA 160
               +H  + + S +   L     ++L         + L  E+ +       ++   E  
Sbjct: 283 AATTTHISLDHHSMT---LTPDEVKSLLLKYLDCRPQDLPREVLTTNPR--RLSIIAESI 337

Query: 161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIR---EDLVV 204
           +DG  T   W +      KL     S L    L     R   + L V
Sbjct: 338 RDGLATWDNWKH--VNCDKLTTIIESSLNV--LEPAEYRKMFDRLSV 380

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 56.4 bits (137), Expect = 8e-10
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 9/82 (10%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
          +T   KG+G  + + L+ +   +      D +  +   E  +         + D+  K  
Sbjct: 12 ITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKED 71

Query: 52 IKALHDHLEAEHGGVDVLVNNA 73
          +  + +   +  G +D L+NNA
Sbjct: 72 LHKIVEEAMSHFGKIDFLINNA 93

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 41/277 (14%), Positives = 65/277 (23%), Gaps = 107/277 (38%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARD----------ASRGQEAL-------- 38
           VTGA K +G  I +GL    +G    + Y  +            A R   A+        
Sbjct: 14  VTGAAKRLGRSIAEGLHA--EGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 71

Query: 39  -------EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF-------------- 77
                         +        L        G  DVLVNNA+  +              
Sbjct: 72  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 131

Query: 78  KVNSSEPFGSQALHTMRTNYFALIDVC--------DILFPLLRSHGRVVNVSSSCGHLCH 129
            V   E   +       +N  A   +                 ++  ++N+         
Sbjct: 132 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD------- 184

Query: 130 VTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA-YAATKLGVTKLSFL 188
                                             + T         Y   K  +  L+  
Sbjct: 185 ----------------------------------AMTNQPLLGYTIYTMAKGALEGLT-- 208

Query: 189 QHAL---LSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
             +    L+   IR    VN V PG   + +     P
Sbjct: 209 -RSAALELAPLQIR----VNGVGPGL--SVLVDDMPP 238

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 48/150 (32%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ--------KLDILDKNS 51
           VTGA +GIG  I +   +   G  +     D +   E L+++          LD+   ++
Sbjct: 218 VTGAARGIGATIAEVFARD--GATVVAIDVDGA--AEDLKRVADKVGGTALTLDVTADDA 273

Query: 52  IKALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHT-----MR----------- 94
           +  +  H+   HGG VD+LVNNA I                T                  
Sbjct: 274 VDKITAHVTEHHGGKVDILVNNAGI----------------TRDKLLANMDEKRWDAVIA 317

Query: 95  TNYFALIDVCDILFP--LLRSHGRVVNVSS 122
            N  A   + + L     +   GRV+ +SS
Sbjct: 318 VNLLAPQRLTEGLVGNGTIGEGGRVIGLSS 347

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 54.8 bits (132), Expect = 3e-09
 Identities = 41/277 (14%), Positives = 65/277 (23%), Gaps = 107/277 (38%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG----IIYLTARD----------ASRGQEAL-------- 38
           VTGA K +G  I +GL  +  G    + Y  +            A R   A+        
Sbjct: 51  VTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 108

Query: 39  -------EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF-------------- 77
                         +        L        G  DVLVNNA+  +              
Sbjct: 109 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 168

Query: 78  KVNSSEPFGSQALHTMRTNYFALIDVC--------DILFPLLRSHGRVVNVSSSCGHLCH 129
            V   E   +       +N  A   +                 ++  ++N+         
Sbjct: 169 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD------- 221

Query: 130 VTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA-YAATKLGVTKLSFL 188
                                             + T         Y   K  +  L+  
Sbjct: 222 ----------------------------------AMTNQPLLGYTIYTMAKGALEGLT-- 245

Query: 189 QHAL---LSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
             +    L+   IR    VN V PG   + +     P
Sbjct: 246 -RSAALELAPLQIR----VNGVGPGL--SVLVDDMPP 275

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 40/235 (17%), Positives = 74/235 (31%), Gaps = 58/235 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQ------FDGIIYLTARDASRGQEALEKL------QKLDILD 48
           V+G   G+G   V+ L          D         A +G+   ++L         ++  
Sbjct: 35  VSGGAGGLGEATVRRLHADGLGVVIAD-------LAAEKGKALADELGNRAEFVSTNVTS 87

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
           ++S+ A  +           +V +         ++    +         F          
Sbjct: 88  EDSVLAAIEAANQLGRLRYAVVAHGGFG----VAQRIVQRDGSPADMGGFT--------- 134

Query: 109 PLLRSHGRVVNVSSSCGHLC---HVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
                  + +++     +L    +V           E +   E  AL+        +G  
Sbjct: 135 -------KTIDL-----YLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG-- 180

Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTDMSSG 219
            + G   +AYAA K GV  L+ +  A  LS   IR    VN + PG + T +   
Sbjct: 181 -QIG--QTAYAAAKAGVIGLT-IAAARDLSSAGIR----VNTIAPGTMKTPIMES 227

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 52.9 bits (128), Expect = 1e-08
 Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 20/93 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ----------------K 43
           VTGA  GIG  +   L  +  G  +     D +  QE +  L                 +
Sbjct: 12  VTGAGSGIGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQ 69

Query: 44  LDILDKNSIKALHDHLEAEHGG-VDVLVNNAAI 75
            D+ +  + + L + ++A       V+V+ A I
Sbjct: 70  ADVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 50.7 bits (122), Expect = 7e-08
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 61/237 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQ------FDGIIYLTARDASRGQEALEKL------QKLDILD 48
           +TG   G+G    + L+ Q       D          S G+   +KL         D+  
Sbjct: 17  ITGGASGLGLATAERLVGQGASAVLLD-------LPNSGGEAQAKKLGNNCVFAPADVTS 69

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNA--AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
           +  ++      + + G VDV VN A  A+A K  + +   +  L   +            
Sbjct: 70  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQ------------ 117

Query: 107 LFPLLRSHGRVVNVSSSCGHLC---HVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
                    RV++V     +L    +V      +   +E     +   ++N     A +G
Sbjct: 118 ---------RVLDV-----NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 163

Query: 164 SHTKGGWPNSAYAATKLGVTKLSFLQHAL-LSQDAIREDLVVNCVHPGYVNTDMSSG 219
               G    +AY+A+K G+  ++ L  A  L+   IR    V  + PG   T + + 
Sbjct: 164 Q--VG---QAAYSASKGGIVGMT-LPIARDLAPIGIR----VMTIAPGLFGTPLLTS 210

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 19/88 (21%)

Query: 1  VTGANKGIGYGIVKGLIQQ------FDGIIYLTARDASRGQEALEKL------QKLDILD 48
          VTGA+ G+G  + + L Q+       D            G+E   +L      +  D+ +
Sbjct: 12 VTGASSGLGAAVTRMLAQEGATVLGLD-------LKPPAGEEPAAELGAAVRFRNADVTN 64

Query: 49 KNSIKALHDHLEAEHGGVDVLVNNAAIA 76
          +    A     + E G V  LVN A  A
Sbjct: 65 EADATAALAFAKQEFGHVHGLVNCAGTA 92

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG++  IG  +V  L +++ G   + A D  +      K   LD+ +++ I        
Sbjct: 4   VTGSSGQIGTELVPYLAEKY-GKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRA----- 57

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHG--RVV 118
            E   +D + + A I       +P         + N     ++ +      + H   +VV
Sbjct: 58  VEKYSIDAIFHLAGILSAKGEKDP-----ALAYKVNMNGTYNILE----AAKQHRVEKVV 108

Query: 119 NVSSS 123
             S+ 
Sbjct: 109 IPSTI 113

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 1  VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQKLDILDKNSIKALH 56
          VTG   G+G    K L+    G    ++ +   D         +    D+ D+ ++ +  
Sbjct: 14 VTGGASGLGLATTKRLLDA--GAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASAL 71

Query: 57 DHLEAEHGGVDVLVNNAAIA 76
          D  E   G + ++VN A   
Sbjct: 72 DLAET-MGTLRIVVNCAGTG 90

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 13/80 (16%)

Query: 1  VTGANKGIGYGIVKGLIQQFDG----IIYLTARDASRGQEALEKLQKLDILDKNSIKALH 56
          VTG   G+G      L  +  G    ++ L       G++ +    + D+  +  ++   
Sbjct: 7  VTGGASGLGRAAALALKAR--GYRVVVLDLRRE----GEDLI--YVEGDVTREEDVRRAV 58

Query: 57 DHLEAEHGGVDVLVNNAAIA 76
             + E   +  +V+ A + 
Sbjct: 59 ARAQ-EEAPLFAVVSAAGVG 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	230
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.98
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.98
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.98
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.98
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.98
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.98
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.98
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.98
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.98
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.98
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.98
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.97
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.97
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.97
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.97
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.97
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.97
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.97
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.97
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.97
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.97
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.97
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.97
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.97
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.97
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.97
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.97
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.97
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.97
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.97
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.97
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.97
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.97
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.97
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.97
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.97
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.97
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.97
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.97
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.97
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.97
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.97
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.97
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.97
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.97
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.97
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.97
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.97
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.97
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.97
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.97
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.97
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.97
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.96
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.96
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.96
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.96
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.96
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.95
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.95
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.95
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.95
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.93
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.93
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.93
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.93
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.92
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.92
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.9
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.9
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.88
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.84
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.82
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.8
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.8
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.79
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.79
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.79
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.78
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.78
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.78
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.77
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.76
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.75
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.75
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.74
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.73
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.73
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.73
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.72
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.72
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.72
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.71
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.71
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.71
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.7
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.7
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.7
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.7
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.7
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.7
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.69
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.69
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.69
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.69
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.69
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.68
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.68
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.67
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.67
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.67
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.67
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.66
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.66
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.66
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.66
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.66
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.66
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.64
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.64
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.63
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.63
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.63
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.63
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.62
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.62
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.62
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.61
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.61
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.61
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.61
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.6
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.6
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.59
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.57
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.57
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.56
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.55
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.52
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.52
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.51
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.51
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.45
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.42
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.42
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.4
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.39
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.39
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.38
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.33
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.29
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.28
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.25
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.22
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.2
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.17
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.1
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.05
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.04
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.04
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.03
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.01
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.95
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.5
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.44
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.37
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.35
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.31
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.31
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.26
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.17
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.17
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.15
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.12
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.12
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.08
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.05
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.01
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.97
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.96
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.87
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.84
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.83
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.81
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.8
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.76
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.75
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.74
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.74
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.74
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.72
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.67
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.62
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.61
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.44
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.43
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.42
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.4
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.4
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.38
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.37
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.35
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.27
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.27
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.24
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.24
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.22
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.16
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.11
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.11
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.09
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.03
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.0
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.0
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.99
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.98
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.97
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.95
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.94
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.93
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.86
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.83
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.75
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.74
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.71
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.65
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.65
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.63
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.62
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.6
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.59
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.57
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.57
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.56
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.49
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.46
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.45
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.45
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.35
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.33
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.32
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.29
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.25
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.2
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.2
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.19
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.14
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.12
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.12
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.08
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.07
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.03
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.03
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.96
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.91
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.88
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.83
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.64
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	95.62
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.6
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.55
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.54
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.44
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.38
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.37
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.32
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.32
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.29
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.19
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.18
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.15
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.07
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.06
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.03
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	94.96
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	94.93
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	94.91
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	94.89
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	94.83
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	94.81
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	94.73
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	94.67
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	94.61
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	94.61
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	94.55
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	94.52
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	94.51
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	94.33
3c85_A	183	Putative glutathione-regulated potassium-efflux S	94.29
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	94.14
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.08
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	93.75
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	93.73
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	93.69
3tl2_A	315	Malate dehydrogenase; center for structural genomi	93.55
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	93.53
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	93.47
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	93.46
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	93.45
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	93.29
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	93.25
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	93.22
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	93.14
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	93.13
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	93.1
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	93.05
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	93.03
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	93.02
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	92.71
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	92.62
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	92.31
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	92.17
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	92.12
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	91.89
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	91.84
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	91.75
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	91.62
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	91.56
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	91.42
4ezb_A	317	Uncharacterized conserved protein; structural geno	91.35
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	91.24
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	91.02
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	90.97
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	90.96
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	90.87
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	90.73
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	90.61
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	90.47
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	90.34
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	90.3
2l82_A	162	Designed protein OR32; structural genomics, northe	90.04
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	89.91
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	89.8
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	89.77
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	89.55
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	89.53
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	89.41
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	89.4
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	89.09
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	89.05
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	88.99
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	88.77
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	88.76
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	88.58
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	88.46

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.6e-41  Score=279.63  Aligned_cols=175  Identities=25%  Similarity=0.343  Sum_probs=160.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|+.|+++ +..|++++|+++++++..++++.         +|++|+++++++++++.++||+||+|||
T Consensus        12 VTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVN   90 (254)
T 4fn4_A           12 VTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCN   90 (254)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 56888999999999988887754         8999999999999999999999999999


Q ss_pred             ccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||+.. ..++.+.+.++|++++++|+.|+|+++|+++|.|++  +|+||++||.++..                     
T Consensus        91 NAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~---------------------  149 (254)
T 4fn4_A           91 NAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR---------------------  149 (254)
T ss_dssp             CCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC---------------------
T ss_pred             CCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC---------------------
Confidence            999864 467888999999999999999999999999999953  58999999999844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.++...|++||+|+.+|+|++|.|++++    |||||+|+||+++|+|....
T Consensus       150 -------------------~~~~~~~Y~asKaal~~ltr~lA~ela~~----gIrVN~V~PG~i~T~~~~~~  198 (254)
T 4fn4_A          150 -------------------GGFAGAPYTVAKHGLIGLTRSIAAHYGDQ----GIRAVAVLPGTVKTNIGLGS  198 (254)
T ss_dssp             -------------------SSSSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSCTTSC
T ss_pred             -------------------CCCCChHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEeCCCCCcccccc
Confidence                               55567899999999999999999999998    89999999999999997654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2e-41  Score=281.61  Aligned_cols=176  Identities=24%  Similarity=0.272  Sum_probs=158.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++|+.|+++ +..|++++|+.+.+++..+++..      +|++|+++++++++++.+.||+||+||||||
T Consensus        34 VTGas~GIG~aiA~~la~~-Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG  112 (273)
T 4fgs_A           34 ITGATSGIGLAAAKRFVAE-GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAG  112 (273)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             EeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 56899999999999988877643      8999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      .....++.+.+.++|+++|++|+.|+|+++|+++|+|+++|+||++||..+..                           
T Consensus       113 ~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~---------------------------  165 (273)
T 4fgs_A          113 GGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST---------------------------  165 (273)
T ss_dssp             CCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS---------------------------
T ss_pred             CCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc---------------------------
Confidence            98889999999999999999999999999999999999999999999998843                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                   +.++...|++||+|+.+|+|++|.|++++    |||||+|+||+++|++.....
T Consensus       166 -------------~~~~~~~Y~asKaav~~ltr~lA~Ela~~----gIrVN~V~PG~i~T~~~~~~~  215 (273)
T 4fgs_A          166 -------------GTPAFSVYAASKAALRSFARNWILDLKDR----GIRINTLSPGPTETTGLVELA  215 (273)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTS----CEEEEEEEECSBCC-------
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCCChhHHHhh
Confidence                         55567899999999999999999999998    899999999999999976654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.2e-40  Score=274.52  Aligned_cols=174  Identities=27%  Similarity=0.370  Sum_probs=160.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+++++++..+++.+         +|++|+++++++++++.++||+||+|||
T Consensus        14 VTGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVN   92 (255)
T 4g81_D           14 VTGSARGLGFAYAEGLAAA-GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILIN   92 (255)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEE
Confidence            7999999999999999999 56899999999999888777754         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.....++.+.+.++|++++++|+.|+|+++|+++|.|.   .+|+||++||..+..                     
T Consensus        93 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~---------------------  151 (255)
T 4g81_D           93 NAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA---------------------  151 (255)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS---------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC---------------------
Confidence            99999889999999999999999999999999999999984   348999999999844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||+|+.+|+|++|.|++++    |||||+|+||+++|+|...
T Consensus       152 -------------------~~~~~~~Y~asKaal~~ltr~lA~ela~~----gIrVN~V~PG~i~T~~~~~  199 (255)
T 4g81_D          152 -------------------ARPTVAPYTAAKGGIKMLTCSMAAEWAQF----NIQTNAIGPGYILTDMNTA  199 (255)
T ss_dssp             -------------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGHH
T ss_pred             -------------------CCCCchhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCCCchhhc
Confidence                               45566899999999999999999999998    8999999999999998653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=2.9e-39  Score=265.08  Aligned_cols=174  Identities=24%  Similarity=0.302  Sum_probs=156.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||+++|+.|+++ +..|++++|+++.+++..++..+     +|++|+++++++++++.++||+||+||||||.
T Consensus         7 VTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~   85 (247)
T 3ged_A            7 VTGGGHGIGKQICLDFLEA-GDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACR   85 (247)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             EecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            7999999999999999999 66888999998888777665443     89999999999999999999999999999999


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      ....++.+.+.++|++++++|+.|+|+++|+++|.|+ .+|+||++||..+..                           
T Consensus        86 ~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~---------------------------  138 (247)
T 3ged_A           86 GSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ---------------------------  138 (247)
T ss_dssp             CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS---------------------------
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc---------------------------
Confidence            8888899999999999999999999999999999986 459999999999843                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                   +.++...|++||+|+.+|+|++|.|+++     |||||+|+||+++|++....
T Consensus       139 -------------~~~~~~~Y~asKaal~~ltk~lA~ela~-----~IrVN~I~PG~i~t~~~~~~  186 (247)
T 3ged_A          139 -------------SEPDSEAYASAKGGIVALTHALAMSLGP-----DVLVNCIAPGWINVTEQQEF  186 (247)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHHHTT-----TSEEEEEEECSBCCCC---C
T ss_pred             -------------CCCCCHHHHHHHHHHHHHHHHHHHHHCC-----CCEEEEEecCcCCCCCcHHH
Confidence                         5556689999999999999999999985     48899999999999987654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1e-38  Score=263.74  Aligned_cols=173  Identities=25%  Similarity=0.280  Sum_probs=149.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|+.|+++ +..|++++|+.+..+.. +++.         .+|++|+++++++++++.++||+||+|||
T Consensus        12 VTGas~GIG~aia~~la~~-Ga~Vv~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVN   89 (258)
T 4gkb_A           12 VTGGASGIGGAISMRLAEE-RAIPVVFARHAPDGAFL-DALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVN   89 (258)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCCCHHHH-HHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHc-CCEEEEEECCcccHHHH-HHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 56788888887765432 2222         18999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |||+... ...+.+.++|++++++|+.|+|+++|+++|.|+ ++|+||++||..+..                       
T Consensus        90 nAGi~~~-~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~-----------------------  145 (258)
T 4gkb_A           90 NAGVNDG-IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT-----------------------  145 (258)
T ss_dssp             CCCCCCC-CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH-----------------------
T ss_pred             CCCCCCC-CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc-----------------------
Confidence            9998643 445788899999999999999999999999996 469999999998843                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                       +.++...|++||+|+.+|+|++|.|++++    |||||+|+||+|+|+|.+..
T Consensus       146 -----------------~~~~~~~Y~asKaav~~ltr~lA~ela~~----gIrVN~V~PG~i~T~~~~~~  194 (258)
T 4gkb_A          146 -----------------GQGNTSGYCASKGAQLALTREWAVALREH----GVRVNAVIPAEVMTPLYRNW  194 (258)
T ss_dssp             -----------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCSCC---
T ss_pred             -----------------CCCCchHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCCCCChhHhhh
Confidence                             45566899999999999999999999998    78899999999999998654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.2e-38  Score=260.14  Aligned_cols=169  Identities=26%  Similarity=0.370  Sum_probs=143.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-h--hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-L--QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-~--~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||++|||+++|+.|+++ +..|++++|+.+.++..... +  ..+|++|+++++++++    .+++||+||||||+..
T Consensus        16 VTGas~GIG~aia~~la~~-Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDiLVNNAGi~~   90 (242)
T 4b79_A           16 VTGGSSGIGAAIAMQFAEL-GAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFE----ALPRLDVLVNNAGISR   90 (242)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHH----HCSCCSEEEECCCCCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHH----hcCCCCEEEECCCCCC
Confidence            7999999999999999999 66888899988776543221 1  1289999999988875    4799999999999864


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                        ++.+.+.++|++++++|+.|+|+++|+++|+|++ +|+||++||..+..                             
T Consensus        91 --~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~-----------------------------  139 (242)
T 4b79_A           91 --DREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTF-----------------------------  139 (242)
T ss_dssp             --GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTS-----------------------------
T ss_pred             --CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccC-----------------------------
Confidence              4567888999999999999999999999999964 69999999999844                             


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                 +.++...|++||+|+.+|+|++|.|++++    |||||+|+||+++|+|....
T Consensus       140 -----------~~~~~~~Y~asKaav~~ltr~lA~Ela~~----gIrVNaV~PG~i~T~m~~~~  188 (242)
T 4b79_A          140 -----------GSADRPAYSASKGAIVQLTRSLACEYAAE----RIRVNAIAPGWIDTPLGAGL  188 (242)
T ss_dssp             -----------CCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCC-----
T ss_pred             -----------CCCCCHHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCCCCChhhhcc
Confidence                       55667999999999999999999999998    89999999999999997654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=8.9e-38  Score=255.54  Aligned_cols=167  Identities=32%  Similarity=0.415  Sum_probs=145.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|+.|+++ +..|++++|+..  ++..+.+.+         +|++|+++++.+++     +++||+|||
T Consensus        14 VTGas~GIG~aiA~~la~~-Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~iDiLVN   85 (247)
T 4hp8_A           14 VTGANTGLGQAIAVGLAAA-GAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DAGFDILVN   85 (247)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TTCCCEEEE
T ss_pred             EeCcCCHHHHHHHHHHHHc-CCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hCCCCEEEE
Confidence            7999999999999999999 557778888754  223333322         89999999888764     589999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||+....++.+.++++|++++++|+.|+|+++|+++|.|+   +.|+||++||..+..                     
T Consensus        86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~---------------------  144 (247)
T 4hp8_A           86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ---------------------  144 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS---------------------
T ss_pred             CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC---------------------
Confidence            99999888999999999999999999999999999999884   248999999999844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||+|+.+|+|++|.|++++    |||||+|+||+++|+|.+.
T Consensus       145 -------------------g~~~~~~Y~asKaav~~ltr~lA~Ela~~----gIrVNaV~PG~i~T~~~~~  192 (247)
T 4hp8_A          145 -------------------GGIRVPSYTAAKHGVAGLTKLLANEWAAK----GINVNAIAPGYIETNNTEA  192 (247)
T ss_dssp             -------------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGHH
T ss_pred             -------------------CCCCChHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEeeCCCCCcchhh
Confidence                               55667899999999999999999999998    8999999999999998753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.8e-36  Score=250.39  Aligned_cols=176  Identities=19%  Similarity=0.213  Sum_probs=156.5

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++  |||+++|+.|+++ +.+|++++|+++.+++..+.+.+          +|++|+++++++++++.+.+|+||+
T Consensus        11 VTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~   89 (256)
T 4fs3_A           11 IMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDG   89 (256)
T ss_dssp             EECCCSTTCHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             EECCCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799765  9999999999999 56899999998888777665543          8999999999999999999999999


Q ss_pred             EEEccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          69 LVNNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        69 lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      ||||||+...    ..+.+.+.++|+.++++|+.+++.+++.++++++++|+||++||..+..                 
T Consensus        90 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~-----------------  152 (256)
T 4fs3_A           90 VYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF-----------------  152 (256)
T ss_dssp             EEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS-----------------
T ss_pred             EEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc-----------------
Confidence            9999998643    3445677889999999999999999999999999999999999999844                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                             +.++...|++||+|+.+|+|+|+.|++++    |||||+|+||+++|++.+...
T Consensus       153 -----------------------~~~~~~~Y~asKaal~~ltr~lA~Ela~~----gIrVN~V~PG~i~T~~~~~~~  202 (256)
T 4fs3_A          153 -----------------------AVQNYNVMGVAKASLEANVKYLALDLGPD----NIRVNAISAGPIRTLSAKGVG  202 (256)
T ss_dssp             -----------------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCSGGGTTCT
T ss_pred             -----------------------CcccchhhHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecCCCCChhhhhcc
Confidence                                   55667999999999999999999999998    899999999999999977543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=5.9e-37  Score=253.75  Aligned_cols=171  Identities=25%  Similarity=0.273  Sum_probs=147.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc--c
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF--K   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~--~   78 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+.++... ......+|++++++++++++++.++||+||+||||||...  .
T Consensus        16 VTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~   93 (261)
T 4h15_A           16 ITAGTKGAGAATVSLFLEL-GAQVLTTARARPEGLP-EELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAG   93 (261)
T ss_dssp             ESCCSSHHHHHHHHHHHHT-TCEEEEEESSCCTTSC-TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCS
T ss_pred             EeccCcHHHHHHHHHHHHc-CCEEEEEECCchhCCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCC
Confidence            7999999999999999999 5688888887543211 0122349999999999999999999999999999999864  3


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      .++.+.+.++|+++|++|+.|+++++|+++|.|++  +|+||++||..+..                             
T Consensus        94 ~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~-----------------------------  144 (261)
T 4h15_A           94 GGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL-----------------------------  144 (261)
T ss_dssp             SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------------------------
T ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc-----------------------------
Confidence            56788999999999999999999999999999963  58999999998843                             


Q ss_pred             HHHhhcCCCcCCCC-CCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         157 VELAQDGSHTKGGW-PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       157 ~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                 +.+ +...|++||+|+.+|+++++.|++++    |||||+|+||+++|++.
T Consensus       145 -----------~~~~~~~~Y~asKaal~~lt~~lA~Ela~~----gIrVN~V~PG~i~T~~~  191 (261)
T 4h15_A          145 -----------PLPESTTAYAAAKAALSTYSKAMSKEVSPK----GVRVVRVSPGWIETEAS  191 (261)
T ss_dssp             -----------CCTTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCHHH
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEeCCCcCCcch
Confidence                       332 35789999999999999999999998    89999999999999875

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-36  Score=247.14  Aligned_cols=175  Identities=21%  Similarity=0.209  Sum_probs=150.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus         8 VTGas~GIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg   86 (235)
T 3l6e_A            8 VTGAGSGLGRALTIGLVER-GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAG   86 (235)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCC
Confidence            7999999999999999999 5689999999988887766553      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      .....++.+.+.++|++++++|+.|+++++++++|.|++ +++||++||..+..                          
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~--------------------------  140 (235)
T 3l6e_A           87 TGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV--------------------------  140 (235)
T ss_dssp             CC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS--------------------------
T ss_pred             CCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC--------------------------
Confidence            987778888999999999999999999999999999965 46999999998854                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                    +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|+|....
T Consensus       141 --------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~  189 (235)
T 3l6e_A          141 --------------GKANESLYCASKWGMRGFLESLRAELKDS----PLRLVNLYPSGIRSEFWDNT  189 (235)
T ss_dssp             --------------SCSSHHHHHHHHHHHHHHHHHHHHHTTTS----SEEEEEEEEEEECCCC----
T ss_pred             --------------CCCCCcHHHHHHHHHHHHHHHHHHHhhcc----CCEEEEEeCCCccCcchhcc
Confidence                          44556899999999999999999999887    79999999999999997654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.4e-35  Score=243.68  Aligned_cols=175  Identities=30%  Similarity=0.419  Sum_probs=158.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+.+..      +|++|+++++++++++.+.++++|+||||||
T Consensus        14 VTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg   92 (248)
T 3op4_A           14 VTGASRGIGKAIAELLAER-GAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAG   92 (248)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 56888999999888877666543      8999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.++|++++++|+.|+++++++++|.|+  +.|+||++||..+..                         
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------------------  147 (248)
T 3op4_A           93 ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM-------------------------  147 (248)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-------------------------
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-------------------------
Confidence            98777788889999999999999999999999999985  458999999988743                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                     +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++.+..
T Consensus       148 ---------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~  196 (248)
T 3op4_A          148 ---------------GNAGQANYAAAKAGVIGFTKSMAREVASR----GVTVNTVAPGFIETDMTKAL  196 (248)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSTTTTTS
T ss_pred             ---------------CCCCChHHHHHHHHHHHHHHHHHHHHHHh----CeEEEEEeeCCCCCchhhhc
Confidence                           44566899999999999999999999987    78999999999999997654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.6e-35  Score=244.42  Aligned_cols=174  Identities=25%  Similarity=0.295  Sum_probs=158.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+++++++..+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        13 VTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg   91 (255)
T 4eso_A           13 VIGGTHGMGLATVRRLVEG-GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAG   91 (255)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            7999999999999999999 5688999999988887766543      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      .....++.+.+.++|++++++|+.|+++++++++|.|+++|+||++||..+..                           
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------------  144 (255)
T 4eso_A           92 VSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG---------------------------  144 (255)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS---------------------------
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC---------------------------
Confidence            98878888899999999999999999999999999998889999999998844                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                   +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++.+.
T Consensus       145 -------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          145 -------------GHPGMSVYSASKAALVSFASVLAAELLPR----GIRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             -------------BCTTBHHHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEEECSBCCSSTTC
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEecCcccCccccc
Confidence                         44566899999999999999999999998    7889999999999998754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.2e-35  Score=244.01  Aligned_cols=176  Identities=24%  Similarity=0.242  Sum_probs=156.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++|+.++++.+|+.+.++...+++..         +|++|+++++++++++.+.++++|+|||
T Consensus         9 VTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~   88 (258)
T 3oid_A            9 VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVN   88 (258)
T ss_dssp             ESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999554444458998888777666542         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..                      
T Consensus        89 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------------  146 (258)
T 3oid_A           89 NAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR----------------------  146 (258)
T ss_dssp             CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS----------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC----------------------
Confidence            999887778888999999999999999999999999999975  47999999988843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.+..
T Consensus       147 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~  195 (258)
T 3oid_A          147 ------------------YLENYTTVGVSKAALEALTRYLAVELSPK----QIIVNAVSGGAIDTDALKHF  195 (258)
T ss_dssp             ------------------BCTTCHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECCBCSGGGGGC
T ss_pred             ------------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEeeCCCcChhhhhc
Confidence                              44566899999999999999999999987    79999999999999987654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=5.3e-35  Score=243.06  Aligned_cols=174  Identities=22%  Similarity=0.223  Sum_probs=152.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|+ .|+++ .++.+.++...+++..         +|++|+++++++++++.+.++++|+||
T Consensus        23 VTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv  101 (270)
T 3is3_A           23 VTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAV  101 (270)
T ss_dssp             ESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799999999999999999955 55554 5566666666555432         899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||||.....++.+.+.++|++++++|+.|+++++++++|.|+++|+||++||..+.                        
T Consensus       102 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~------------------------  157 (270)
T 3is3_A          102 SNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK------------------------  157 (270)
T ss_dssp             CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT------------------------
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc------------------------
Confidence            99999877788889999999999999999999999999999989999999998742                        


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                     ..+.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++.+
T Consensus       158 ---------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~  206 (270)
T 3is3_A          158 ---------------DFSVPKHSLYSGSKGAVDSFVRIFSKDCGDK----KITVNAVAPGGTVTDMFH  206 (270)
T ss_dssp             ---------------TCCCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSTTHH
T ss_pred             ---------------cCCCCCCchhHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCCccChhhh
Confidence                           1234566899999999999999999999987    788999999999999864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.7e-35  Score=241.84  Aligned_cols=174  Identities=16%  Similarity=0.192  Sum_probs=148.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..         +|++|+++++++++++.+. +++|+|||
T Consensus        12 VTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~   89 (252)
T 3h7a_A           12 VIGAGDYIGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APLEVTIF   89 (252)
T ss_dssp             EECCSSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCEEEEEE
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCceEEEE
Confidence            7999999999999999999 56899999999998888776642         8999999999999999999 99999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.++|++++++|+.|++.++++++|.|++  .|+||++||..+..                      
T Consensus        90 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  147 (252)
T 3h7a_A           90 NVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR----------------------  147 (252)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC----------------------
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC----------------------
Confidence            999988778888999999999999999999999999999964  48999999998844                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEE-EEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVV-NCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v-~~v~pG~v~t~~~~~~  220 (230)
                                        +.++...|++||+++++|+++++.++++.    ||+| |+|+||+++|+|.+..
T Consensus       148 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~v~n~v~PG~v~T~~~~~~  197 (252)
T 3h7a_A          148 ------------------GGSGFAAFASAKFGLRAVAQSMARELMPK----NIHVAHLIIDSGVDTAWVRER  197 (252)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC-----------
T ss_pred             ------------------CCCCCccHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEecCCccCChhhhcc
Confidence                              45566899999999999999999999987    7889 9999999999998654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-35  Score=245.96  Aligned_cols=175  Identities=30%  Similarity=0.334  Sum_probs=149.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++|..+++...++.+.++...+.+..         +|++|+++++++++++.+.++++|+|||
T Consensus        32 VTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvn  111 (267)
T 3u5t_A           32 VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVN  111 (267)
T ss_dssp             EESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999554444446677777666555432         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |||.....++.+.+.+.|+++|++|+.|++.++++++|.|+++|+||++||..+..                        
T Consensus       112 nAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------------  167 (267)
T 3u5t_A          112 NAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL------------------------  167 (267)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH------------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc------------------------
Confidence            99998777888899999999999999999999999999998889999999987733                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                      +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++...
T Consensus       168 ----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~  215 (267)
T 3u5t_A          168 ----------------LHPSYGIYAAAKAGVEAMTHVLSKELRGR----DITVNAVAPGPTATDLFLE  215 (267)
T ss_dssp             ----------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTS----CCEEEEEEECCBC------
T ss_pred             ----------------CCCCchHHHHHHHHHHHHHHHHHHHhhhh----CCEEEEEEECCCcCccccc
Confidence                            34456899999999999999999999987    7899999999999999754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=5.2e-35  Score=242.50  Aligned_cols=173  Identities=25%  Similarity=0.298  Sum_probs=156.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..           +|++|+++++++++++.+.++++|+|
T Consensus        13 VTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   91 (265)
T 3lf2_A           13 VTGGSSGIGLATVELLLEA-GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASIL   91 (265)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEE
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7999999999999999999 56788999999888776655432           89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||.....++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..                    
T Consensus        92 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  151 (265)
T 3lf2_A           92 VNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ--------------------  151 (265)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS--------------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC--------------------
Confidence            99999988888889999999999999999999999999999965  48999999998844                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++..
T Consensus       152 --------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~  198 (265)
T 3lf2_A          152 --------------------PEPHMVATSAARAGVKNLVRSMAFEFAPK----GVRVNGILIGLVESGQWR  198 (265)
T ss_dssp             --------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred             --------------------CCCCchhhHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCcCcCchhh
Confidence                                45566999999999999999999999998    799999999999998753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=5.8e-35  Score=241.14  Aligned_cols=172  Identities=22%  Similarity=0.288  Sum_probs=155.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        17 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~   95 (256)
T 3gaf_A           17 VTGAAAGIGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVN   95 (256)
T ss_dssp             ECSCSSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 56788999999888877666532         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++ +.+.++|++++++|+.|+++++++++|.|++  .|+||++||..+..                      
T Consensus        96 nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  152 (256)
T 3gaf_A           96 NAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN----------------------  152 (256)
T ss_dssp             CCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC----------------------
T ss_pred             CCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC----------------------
Confidence            9999877667 8899999999999999999999999999964  48999999998843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++..
T Consensus       153 ------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~  199 (256)
T 3gaf_A          153 ------------------TNVRMASYGSSKAAVNHLTRNIAFDVGPM----GIRVNAIAPGAIKTDALA  199 (256)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCHHHH
T ss_pred             ------------------CCCCchHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEEEccccCchhh
Confidence                              45566899999999999999999999987    789999999999999753

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.8e-35  Score=243.51  Aligned_cols=177  Identities=23%  Similarity=0.247  Sum_probs=157.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        33 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn  111 (283)
T 3v8b_A           33 ITGAGSGIGRATALALAAD-GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVA  111 (283)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 56888999999888887776642         8999999999999999999999999999


Q ss_pred             ccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.... .++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+...                    
T Consensus       112 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~--------------------  171 (283)
T 3v8b_A          112 NAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT--------------------  171 (283)
T ss_dssp             CCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB--------------------
T ss_pred             CCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC--------------------
Confidence            9998643 77888999999999999999999999999999964  589999999988431                    


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        .+.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++....
T Consensus       172 ------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~  221 (283)
T 3v8b_A          172 ------------------FTTPGATAYTATKAAQVAIVQQLALELGKH----HIRVNAVCPGAIETNISDNT  221 (283)
T ss_dssp             ------------------CCSTTCHHHHHHHHHHHHHHHHHHHHTTTT----TEEEEEEEECSBSSCTTCCT
T ss_pred             ------------------CCCCCchHHHHHHHHHHHHHHHHHHHhCcc----CcEEEEEEeCCCcCCccccc
Confidence                              134456899999999999999999999987    79999999999999997654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=8.1e-35  Score=238.76  Aligned_cols=175  Identities=26%  Similarity=0.378  Sum_probs=153.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEe-cCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~-r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|+ .|++.+ ++.++++...+++.         .+|++|+++++++++++.+.++++|+||
T Consensus         9 VTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv   87 (246)
T 3osu_A            9 VTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLV   87 (246)
T ss_dssp             ETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799999999999999999955 555554 46666766665543         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|+++++++++|.|+  +.++||++||..+..                     
T Consensus        88 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  146 (246)
T 3osu_A           88 NNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV---------------------  146 (246)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------------------
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC---------------------
Confidence            999998878888899999999999999999999999999985  458999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.++...|++||+++++|+++++.|+++.    ||+||+|+||++.|++.+..
T Consensus       147 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~  195 (246)
T 3osu_A          147 -------------------GNPGQANYVATKAGVIGLTKSAARELASR----GITVNAVAPGFIVSDMTDAL  195 (246)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBGGGCCSCS
T ss_pred             -------------------CCCCChHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEECCCcCCccccc
Confidence                               44566899999999999999999999987    78999999999999997653

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=8.5e-35  Score=242.34  Aligned_cols=175  Identities=24%  Similarity=0.251  Sum_probs=152.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        33 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg  111 (272)
T 4dyv_A           33 VTGAGSGVGRAVAVALAGA-GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAG  111 (272)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5688999999988888777653      38999999999999999999999999999999


Q ss_pred             Cccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          75 IAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        75 ~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ...+ .++.+.+.++|++++++|+.|+++++++++|.|++    .|+||++||..+..                      
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----------------------  169 (272)
T 4dyv_A          112 TGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS----------------------  169 (272)
T ss_dssp             CCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS----------------------
T ss_pred             CCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC----------------------
Confidence            8654 56778899999999999999999999999999864    47999999998844                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|+|.+..
T Consensus       170 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~  218 (272)
T 4dyv_A          170 ------------------PRPYSAPYTATKHAITGLTKSTSLDGRVH----DIACGQIDIGNADTPMAQKM  218 (272)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEEECC-------
T ss_pred             ------------------CCCCchHHHHHHHHHHHHHHHHHHHhCcc----CEEEEEEEECcccChhhhhh
Confidence                              45566899999999999999999999987    79999999999999997654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-34  Score=242.03  Aligned_cols=173  Identities=25%  Similarity=0.244  Sum_probs=153.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-------------CcchhHHHHHhhhc---------ccCCCHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-------------DASRGQEALEKLQK---------LDILDKNSIKALHDH   58 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-------------~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~   58 (230)
                      ||||++|||++++++|+++ +..|++++|             +.+++++..+.+..         +|++|++++++++++
T Consensus        20 VTGas~gIG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   98 (280)
T 3pgx_A           20 ITGAARGQGRSHAVRLAAE-GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVAD   98 (280)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            7999999999999999999 557777777             55566666555432         899999999999999


Q ss_pred             HHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHH
Q psy7994          59 LEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEAL  135 (230)
Q Consensus        59 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~  135 (230)
                      +.+.++++|+||||||.....++.+.+.++|++++++|+.|+++++++++|.|++   .++||++||..+..        
T Consensus        99 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  170 (280)
T 3pgx_A           99 GMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK--------  170 (280)
T ss_dssp             HHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS--------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc--------
Confidence            9999999999999999988788888999999999999999999999999999853   58999999998844        


Q ss_pred             HHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         136 KKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                                      +.++...|++||+++++|+++++.|++++    ||+||+|+||+++|+
T Consensus       171 --------------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~  214 (280)
T 3pgx_A          171 --------------------------------ATPGNGHYSASKHGLTALTNTLAIELGEY----GIRVNSIHPYSVETP  214 (280)
T ss_dssp             --------------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCST
T ss_pred             --------------------------------CCCCchhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcccCc
Confidence                                            45566899999999999999999999988    799999999999999


Q ss_pred             CCC
Q psy7994         216 MSS  218 (230)
Q Consensus       216 ~~~  218 (230)
                      +..
T Consensus       215 ~~~  217 (280)
T 3pgx_A          215 MIE  217 (280)
T ss_dssp             TCC
T ss_pred             ccc
Confidence            875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-34  Score=240.87  Aligned_cols=175  Identities=28%  Similarity=0.316  Sum_probs=153.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|+ .|+++ .++.+.++...+++..         +|++|+++++++++++.+.++++|+||
T Consensus        36 VTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  114 (271)
T 3v2g_A           36 VTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILV  114 (271)
T ss_dssp             EETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEE
Confidence            799999999999999999955 56555 4555666666555532         899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||||.....++.+.+.++|++++++|+.|++.++++++|.|++.++||++||..+...                      
T Consensus       115 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~----------------------  172 (271)
T 3v2g_A          115 NSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV----------------------  172 (271)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC----------------------
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC----------------------
Confidence            9999987788888999999999999999999999999999998999999999776331                      


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++...
T Consensus       173 -----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~  220 (271)
T 3v2g_A          173 -----------------PWPGISLYSASKAALAGLTKGLARDLGPR----GITVNIVHPGSTDTDMNPA  220 (271)
T ss_dssp             -----------------CSTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSSSSCS
T ss_pred             -----------------CCCCchHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEecCCCcCCcccc
Confidence                             23456899999999999999999999987    7889999999999999764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.7e-34  Score=238.30  Aligned_cols=174  Identities=18%  Similarity=0.281  Sum_probs=155.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        11 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~   89 (257)
T 3imf_A           11 ITGGSSGMGKGMATRFAKE-GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILIN   89 (257)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 56788999999988887776542         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc-cC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL-RS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l-~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.....++.+.+.++|++++++|+.|+++++++++|.| ++  .++||++||..+..                     
T Consensus        90 nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  148 (257)
T 3imf_A           90 NAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD---------------------  148 (257)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS---------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc---------------------
Confidence            9999877788889999999999999999999999999998 33  48999999998843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh-hhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS-QDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||+++++|+++++.|+. +.    ||+||+|+||+++|++...
T Consensus       149 -------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~----gIrvn~v~PG~v~t~~~~~  197 (257)
T 3imf_A          149 -------------------AGPGVIHSAAAKAGVLAMTKTLAVEWGRKY----GIRVNAIAPGPIERTGGAD  197 (257)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCBSSCCCC-
T ss_pred             -------------------CCCCcHHHHHHHHHHHHHHHHHHHHhcccc----CeEEEEEEECCCcCCcchh
Confidence                               445668999999999999999999997 65    7899999999999997543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-34  Score=240.93  Aligned_cols=173  Identities=25%  Similarity=0.337  Sum_probs=149.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..         +|++|+++++++++++.+.++++|+|||
T Consensus         9 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn   87 (264)
T 3tfo_A            9 ITGASGGIGEGIARELGVA-GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVN   87 (264)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EeCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 56788999999888887776642         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.+.|++++++|+.|+++++++++|.|+  +.|+||++||..+..                      
T Consensus        88 nAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----------------------  145 (264)
T 3tfo_A           88 NAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS----------------------  145 (264)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------------
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc----------------------
Confidence            99998777888899999999999999999999999999985  458999999998844                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        +.++...|++||+++++|+++++.++ +     ||+||+|+||+++|+|.+..
T Consensus       146 ------------------~~~~~~~Y~asKaal~~l~~~la~e~-~-----gIrvn~v~PG~v~T~~~~~~  192 (264)
T 3tfo_A          146 ------------------VVPTAAVYCATKFAVRAISDGLRQES-T-----NIRVTCVNPGVVESELAGTI  192 (264)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHC-S-----SEEEEEEEECCC--------
T ss_pred             ------------------cCCCChhHHHHHHHHHHHHHHHHHhC-C-----CCEEEEEecCCCcCcccccc
Confidence                              45566899999999999999999996 2     58999999999999997643

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.7e-35  Score=243.03  Aligned_cols=175  Identities=25%  Similarity=0.271  Sum_probs=152.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.          .+|++|+++++++++++.+.++++|+||
T Consensus        38 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  116 (281)
T 4dry_A           38 VTGGGTGVGRGIAQALSAE-GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLV  116 (281)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 5689999999988877766542          2899999999999999999999999999


Q ss_pred             EccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          71 NNAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        71 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||.... .++.+.+.++|++++++|+.|+++++++++|.|++    .|+||++||..+..                  
T Consensus       117 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------------------  178 (281)
T 4dry_A          117 NNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT------------------  178 (281)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC------------------
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC------------------
Confidence            99998654 66778899999999999999999999999999864    47999999998843                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                            +.++...|++||+|+++|+++++.|+++.    ||+||+|+||+++|+|.+..
T Consensus       179 ----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~  227 (281)
T 4dry_A          179 ----------------------PRPNSAPYTATKHAITGLTKSTALDGRMH----DIACGQIDIGNAATDMTARM  227 (281)
T ss_dssp             ----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEECBCC------
T ss_pred             ----------------------CCCCChhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEECcCcChhhhhh
Confidence                                  45566899999999999999999999987    79999999999999997654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-34  Score=241.61  Aligned_cols=174  Identities=26%  Similarity=0.363  Sum_probs=153.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC------------cchhHHHHHhhh---------cccCCCHHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD------------ASRGQEALEKLQ---------KLDILDKNSIKALHDHL   59 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~------------~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~   59 (230)
                      ||||++|||++++++|+++ +..|++++|+            .+.++...+.+.         .+|++|+++++++++++
T Consensus        15 VTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   93 (281)
T 3s55_A           15 ITGGARGMGRSHAVALAEA-GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEA   93 (281)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             EeCCCchHHHHHHHHHHHC-CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            7999999999999999999 5578888886            334444444332         28999999999999999


Q ss_pred             HhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHH
Q psy7994          60 EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKK  137 (230)
Q Consensus        60 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~  137 (230)
                      .+.++++|+||||||.....++.+.+.++|++++++|+.|+++++++++|.|+  +.|+||++||..++.          
T Consensus        94 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  163 (281)
T 3s55_A           94 EDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS----------  163 (281)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----------
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC----------
Confidence            99999999999999998888888999999999999999999999999999885  358999999998844          


Q ss_pred             HhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         138 KLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                                    +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++.
T Consensus       164 ------------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~  209 (281)
T 3s55_A          164 ------------------------------ANFAQASYVSSKWGVIGLTKCAAHDLVGY----GITVNAVAPGNIETPMT  209 (281)
T ss_dssp             ------------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCSTTT
T ss_pred             ------------------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCcccCccc
Confidence                                          44566899999999999999999999987    79999999999999997


Q ss_pred             CC
Q psy7994         218 SG  219 (230)
Q Consensus       218 ~~  219 (230)
                      +.
T Consensus       210 ~~  211 (281)
T 3s55_A          210 HN  211 (281)
T ss_dssp             SS
T ss_pred             cc
Confidence            53

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1e-34  Score=240.39  Aligned_cols=174  Identities=25%  Similarity=0.276  Sum_probs=156.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.          .+|++|+++++++++++.+.++++|+||
T Consensus        15 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv   93 (262)
T 3pk0_A           15 VTGGTKGIGRGIATVFARA-GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVC   93 (262)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            7999999999999999999 5588899999988887766653          2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|+++++++++|.|+  +.++||++||..+..                     
T Consensus        94 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------------  152 (262)
T 3pk0_A           94 ANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI---------------------  152 (262)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT---------------------
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc---------------------
Confidence            999998888888999999999999999999999999999986  358999999988742                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        .+.++...|++||+++++|+++++.|+++.    ||+||+|+||++.|++..
T Consensus       153 ------------------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~  200 (262)
T 3pk0_A          153 ------------------TGYPGWSHYGATKAAQLGFMRTAAIELAPH----KITVNAIMPGNIMTEGLL  200 (262)
T ss_dssp             ------------------BCCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCHHHH
T ss_pred             ------------------CCCCCChhhHHHHHHHHHHHHHHHHHHHhh----CcEEEEEEeCcCcCcccc
Confidence                              234566899999999999999999999998    788999999999998754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=9.7e-35  Score=242.23  Aligned_cols=173  Identities=25%  Similarity=0.243  Sum_probs=152.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-------------CcchhHHHHHhhhc---------ccCCCHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-------------DASRGQEALEKLQK---------LDILDKNSIKALHDH   58 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-------------~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~   58 (230)
                      ||||++|||++++++|+++ +..|++++|             +.+.+++..+.+..         +|++|++++++++++
T Consensus        16 VTGas~GIG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (277)
T 3tsc_A           16 ITGAARGQGRAHAVRMAAE-GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDD   94 (277)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             EECCccHHHHHHHHHHHHc-CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            7999999999999999999 557777877             45555555554432         899999999999999


Q ss_pred             HHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHH
Q psy7994          59 LEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEAL  135 (230)
Q Consensus        59 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~  135 (230)
                      +.+.+++||+||||||.....++.+.+.++|+++|++|+.|+++++++++|.|++   .|+||++||..+..        
T Consensus        95 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------  166 (277)
T 3tsc_A           95 GVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK--------  166 (277)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC--------
Confidence            9999999999999999988777888999999999999999999999999998864   57999999998844        


Q ss_pred             HHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         136 KKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                                      +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|+
T Consensus       167 --------------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~  210 (277)
T 3tsc_A          167 --------------------------------MQPFMIHYTASKHAVTGLARAFAAELGKH----SIRVNSVHPGPVNTP  210 (277)
T ss_dssp             --------------------------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSSG
T ss_pred             --------------------------------CCCCchhhHHHHHHHHHHHHHHHHHhCcc----CeEEEEEEeCCCcCC
Confidence                                            44566899999999999999999999987    799999999999999


Q ss_pred             CCC
Q psy7994         216 MSS  218 (230)
Q Consensus       216 ~~~  218 (230)
                      |..
T Consensus       211 ~~~  213 (277)
T 3tsc_A          211 MGS  213 (277)
T ss_dssp             GGS
T ss_pred             ccc
Confidence            864

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=7.8e-35  Score=242.39  Aligned_cols=173  Identities=25%  Similarity=0.364  Sum_probs=157.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        31 VTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  109 (271)
T 4ibo_A           31 VTGSSRGLGRAMAEGLAVA-GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVN  109 (271)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            7999999999999999999 56889999999888887776642         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||..+..                      
T Consensus       110 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~----------------------  167 (271)
T 4ibo_A          110 NAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL----------------------  167 (271)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------------
T ss_pred             CCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC----------------------
Confidence            999987788888999999999999999999999999999864  48999999988844                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.+
T Consensus       168 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~  214 (271)
T 4ibo_A          168 ------------------ARATVAPYTVAKGGIKMLTRAMAAEWAQY----GIQANAIGPGYMLTDMNQ  214 (271)
T ss_dssp             ------------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGH
T ss_pred             ------------------CCCCchhHHHHHHHHHHHHHHHHHHHhhh----CeEEEEEEeccEeCcchh
Confidence                              44566899999999999999999999987    799999999999999864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.7e-34  Score=241.79  Aligned_cols=174  Identities=25%  Similarity=0.225  Sum_probs=152.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC----------------cchhHHHHHhhhc---------ccCCCHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD----------------ASRGQEALEKLQK---------LDILDKNSIKAL   55 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~----------------~~~~~~~~~~~~~---------~D~s~~~~v~~~   55 (230)
                      ||||++|||++++++|+++ +..|++++|+                .+.+++..+.+..         +|++|+++++++
T Consensus        16 VTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   94 (286)
T 3uve_A           16 VTGAARGQGRSHAVRLAQE-GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAA   94 (286)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             EeCCCchHHHHHHHHHHHC-CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHH
Confidence            7999999999999999999 5678888776                4455555544432         899999999999


Q ss_pred             HHHHHhhcCCCcEEEEccCCccccC-CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccc
Q psy7994          56 HDHLEAEHGGVDVLVNNAAIAFKVN-SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVT  131 (230)
Q Consensus        56 ~~~~~~~~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~  131 (230)
                      ++++.+.+++||+||||||...... +.+.+.++|+++|++|+.|+++++++++|.|++   .|+||++||..+..    
T Consensus        95 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  170 (286)
T 3uve_A           95 VDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK----  170 (286)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhcc----
Confidence            9999999999999999999876554 777889999999999999999999999999853   57999999998843    


Q ss_pred             hHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCc
Q psy7994         132 SEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGY  211 (230)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~  211 (230)
                                                          +.++...|++||+++++|+++++.|+++.    ||+||+|+||+
T Consensus       171 ------------------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gI~vn~v~PG~  210 (286)
T 3uve_A          171 ------------------------------------AYPHTGHYVAAKHGVVGLMRAFGVELGQH----MIRVNSVHPTH  210 (286)
T ss_dssp             ------------------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESS
T ss_pred             ------------------------------------CCCCccHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCc
Confidence                                                45566899999999999999999999987    79999999999


Q ss_pred             cccCCCCC
Q psy7994         212 VNTDMSSG  219 (230)
Q Consensus       212 v~t~~~~~  219 (230)
                      ++|+|.+.
T Consensus       211 v~T~~~~~  218 (286)
T 3uve_A          211 VKTPMLHN  218 (286)
T ss_dssp             BSSTTTSS
T ss_pred             ccCCcccc
Confidence            99999753

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-34  Score=235.84  Aligned_cols=174  Identities=28%  Similarity=0.340  Sum_probs=155.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||++|||++++++|+++| +..|++.+|+.++++...+++.      .+|++|+++++++++++.+.++++|+|||||
T Consensus         7 VTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA   86 (254)
T 3kzv_A            7 VTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANA   86 (254)
T ss_dssp             ECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECC
Confidence            79999999999999999997 4688889999988887766543      2899999999999999999999999999999


Q ss_pred             CCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |...+ .++.+.+.++|++++++|+.|+++++++++|.|++ +|+||++||..+..                        
T Consensus        87 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~------------------------  142 (254)
T 3kzv_A           87 GVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNM------------------------  142 (254)
T ss_dssp             CCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCC------------------------
T ss_pred             cccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhcc------------------------
Confidence            98643 67888999999999999999999999999999864 58999999998844                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                      +.++...|++||+++++|+++++.|+  .    ||+||+|+||+++|+|....
T Consensus       143 ----------------~~~~~~~Y~asK~a~~~~~~~la~e~--~----~i~vn~v~PG~v~t~~~~~~  189 (254)
T 3kzv_A          143 ----------------YFSSWGAYGSSKAALNHFAMTLANEE--R----QVKAIAVAPGIVDTDMQVNI  189 (254)
T ss_dssp             ----------------SSCCSHHHHHHHHHHHHHHHHHHHHC--T----TSEEEEEECSSCCCCCSCCC
T ss_pred             ----------------CCCCcchHHHHHHHHHHHHHHHHhhc--c----CcEEEEEeCCcccchhHHHh
Confidence                            44566899999999999999999997  3    69999999999999998765

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.6e-34  Score=241.21  Aligned_cols=171  Identities=20%  Similarity=0.292  Sum_probs=155.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.+++..+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        32 VTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg  110 (277)
T 4dqx_A           32 VTGGGSGIGRATAELFAKN-GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAG  110 (277)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5688899999888877766543      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.+.|++++++|+.|+++++++++|.|++  .|+||++||..+..                         
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------------------  165 (277)
T 4dqx_A          111 FGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS-------------------------  165 (277)
T ss_dssp             CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS-------------------------
T ss_pred             cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc-------------------------
Confidence            988888889999999999999999999999999999975  37999999998843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                     +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++
T Consensus       166 ---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~  210 (277)
T 4dqx_A          166 ---------------AIADRTAYVASKGAISSLTRAMAMDHAKE----GIRVNAVAPGTIDSPY  210 (277)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHH
T ss_pred             ---------------CCCCChhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcCcCch
Confidence                           45566899999999999999999999987    7899999999999997

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=6.3e-35  Score=239.68  Aligned_cols=174  Identities=28%  Similarity=0.338  Sum_probs=156.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        11 VTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg   89 (247)
T 3rwb_A           11 VTGAAQGIGKAIAARLAAD-GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNAS   89 (247)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            7999999999999999999 5688899999988887766553      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      .....++.+.+.++|++++++|+.|+++++++++|.|++   .++||++||..+..                        
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------------  145 (247)
T 3rwb_A           90 IVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA------------------------  145 (247)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH------------------------
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc------------------------
Confidence            987777888999999999999999999999999999863   48999999988743                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                      +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.+.
T Consensus       146 ----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~  193 (247)
T 3rwb_A          146 ----------------GTPNMAAYVAAKGGVIGFTRALATELGKY----NITANAVTPGLIESDGVKA  193 (247)
T ss_dssp             ----------------TCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHT
T ss_pred             ----------------CCCCchhhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcCcCccccc
Confidence                            44566899999999999999999999987    7999999999999987543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=8.8e-35  Score=241.32  Aligned_cols=173  Identities=25%  Similarity=0.289  Sum_probs=156.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.+          +|++|+++++++++++.+.++++|+||
T Consensus        25 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv  103 (266)
T 4egf_A           25 ITGATKGIGADIARAFAAA-GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLV  103 (266)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 56799999999888777665532          899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||||...+.++.+.+.+.|++++++|+.|+++++++++|.|++   .++||++||..+..                    
T Consensus       104 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  163 (266)
T 4egf_A          104 NNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA--------------------  163 (266)
T ss_dssp             EECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--------------------
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc--------------------
Confidence            9999988788888999999999999999999999999999864   57999999998843                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|++||+++++|+++++.++++.    ||+||+|+||++.|++.+
T Consensus       164 --------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~  210 (266)
T 4egf_A          164 --------------------PLPDHYAYCTSKAGLVMATKVLARELGPH----GIRANSVCPTVVLTEMGQ  210 (266)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCBCSHHHH
T ss_pred             --------------------CCCCChHHHHHHHHHHHHHHHHHHHHhhh----CeEEEEEEeCCCcCchhh
Confidence                                45566899999999999999999999987    799999999999999754

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.7e-34  Score=241.36  Aligned_cols=174  Identities=22%  Similarity=0.213  Sum_probs=152.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC------------cchhHHHHHhhhc---------ccCCCHHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD------------ASRGQEALEKLQK---------LDILDKNSIKALHDHL   59 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~------------~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~   59 (230)
                      ||||++|||+++++.|+++ +..|++++|+            .+.+++..+++..         +|++|+++++++++++
T Consensus        33 VTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  111 (299)
T 3t7c_A           33 ITGAARGQGRSHAITLARE-GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDG  111 (299)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            7999999999999999999 5677777776            4555555554432         8999999999999999


Q ss_pred             HhhcCCCcEEEEccCCccccC-CCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHH
Q psy7994          60 EAEHGGVDVLVNNAAIAFKVN-SSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEAL  135 (230)
Q Consensus        60 ~~~~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~  135 (230)
                      .+.+++||+||||||...... +.+.+.++|++++++|+.|+++++++++|.|+   +.|+||++||..+..        
T Consensus       112 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~--------  183 (299)
T 3t7c_A          112 VTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR--------  183 (299)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS--------
T ss_pred             HHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc--------
Confidence            999999999999999876655 78889999999999999999999999999874   248999999998844        


Q ss_pred             HHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         136 KKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                                      +.++...|++||+++++|+++++.|+++.    ||+||+|+||+|+|+
T Consensus       184 --------------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~  227 (299)
T 3t7c_A          184 --------------------------------GAENIGNYIASKHGLHGLMRTMALELGPR----NIRVNIVCPSSVATP  227 (299)
T ss_dssp             --------------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCBSST
T ss_pred             --------------------------------CCCCcchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCCccCc
Confidence                                            45566899999999999999999999988    799999999999999


Q ss_pred             CCCC
Q psy7994         216 MSSG  219 (230)
Q Consensus       216 ~~~~  219 (230)
                      |...
T Consensus       228 ~~~~  231 (299)
T 3t7c_A          228 MLLN  231 (299)
T ss_dssp             TTSS
T ss_pred             cccc
Confidence            9753

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.4e-34  Score=237.63  Aligned_cols=173  Identities=23%  Similarity=0.313  Sum_probs=156.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        13 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag   91 (259)
T 4e6p_A           13 ITGSARGIGRAFAEAYVRE-GATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAA   91 (259)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5678899999988887776653      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      .....++.+.+.+.|++++++|+.|+++++++++|.|++   .|+||++||..+..                        
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------------  147 (259)
T 4e6p_A           92 LFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR------------------------  147 (259)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------------------
T ss_pred             cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc------------------------
Confidence            987778888999999999999999999999999999854   58999999998844                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                      +.++...|++||+++++|+++++.++++.    ||+||+|+||++.|++.+
T Consensus       148 ----------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~  194 (259)
T 4e6p_A          148 ----------------GEALVAIYCATKAAVISLTQSAGLDLIKH----RINVNAIAPGVVDGEHWD  194 (259)
T ss_dssp             ----------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSTTHH
T ss_pred             ----------------CCCCChHHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEEECCCccchhh
Confidence                            44566899999999999999999999987    789999999999999754

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.3e-34  Score=240.99  Aligned_cols=173  Identities=28%  Similarity=0.418  Sum_probs=156.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.+++..+.+..         +|++|+++++++++++.+.++++|+|||
T Consensus        33 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn  111 (270)
T 3ftp_A           33 VTGASRGIGRAIALELARR-GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVN  111 (270)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 56889999998888777665542         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.++|++++++|+.|+++++++++|.|+  +.|+||++||..+..                      
T Consensus       112 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  169 (270)
T 3ftp_A          112 NAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA----------------------  169 (270)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------------
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC----------------------
Confidence            99998888888899999999999999999999999999884  458999999988743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++..
T Consensus       170 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~  216 (270)
T 3ftp_A          170 ------------------GNPGQVNYAAAKAGVAGMTRALAREIGSR----GITVNCVAPGFIDTDMTK  216 (270)
T ss_dssp             ------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSHHHH
T ss_pred             ------------------CCCCchhHHHHHHHHHHHHHHHHHHHhhh----CeEEEEEEeCCCcCcchh
Confidence                              44566899999999999999999999987    789999999999999754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.1e-34  Score=238.71  Aligned_cols=173  Identities=26%  Similarity=0.332  Sum_probs=150.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.            .+|++|+++++++++++.+.++++|+
T Consensus        12 VTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   90 (250)
T 3nyw_A           12 ITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDI   90 (250)
T ss_dssp             EESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999 5588999999988877766542            28999999999999999999999999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||||.....++ +.+.+.|++++++|+.|++.++++++|.|+  +.++||++||..+..                   
T Consensus        91 lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------------  150 (250)
T 3nyw_A           91 LVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY-------------------  150 (250)
T ss_dssp             EEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------------
T ss_pred             EEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC-------------------
Confidence            9999999877666 778899999999999999999999999985  458999999998844                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                           +..+...|++||+++++|+++++.++.+.    ||+||+|+||+++|+|.+.
T Consensus       151 ---------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~  198 (250)
T 3nyw_A          151 ---------------------GFADGGIYGSTKFALLGLAESLYRELAPL----GIRVTTLCPGWVNTDMAKK  198 (250)
T ss_dssp             -----------------------CCTTHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCSHHHHH
T ss_pred             ---------------------CCCCCcchHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCcccCchhhh
Confidence                                 23346899999999999999999999987    7999999999999998654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.2e-34  Score=239.43  Aligned_cols=173  Identities=27%  Similarity=0.347  Sum_probs=157.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.++...+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        34 VTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg  112 (277)
T 3gvc_A           34 VTGAGAGIGLAVARRLADE-GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAG  112 (277)
T ss_dssp             ETTTTSTHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5688999999988887776653      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.++|++++++|+.|+++++++++|.|+  +.|+||++||..+..                         
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-------------------------  167 (277)
T 3gvc_A          113 VVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV-------------------------  167 (277)
T ss_dssp             CCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-------------------------
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-------------------------
Confidence            98888888999999999999999999999999999985  458999999998843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                     +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++.+
T Consensus       168 ---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~  214 (277)
T 3gvc_A          168 ---------------AVGGTGAYGMSKAGIIQLSRITAAELRSS----GIRSNTLLPAFVDTPMQQ  214 (277)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred             ---------------CCCCchhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCccCchHH
Confidence                           45566899999999999999999999987    799999999999999753

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-34  Score=238.00  Aligned_cols=175  Identities=25%  Similarity=0.292  Sum_probs=144.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.+++..+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        12 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg   90 (257)
T 3tpc_A           12 VTGASSGLGAAVTRMLAQE-GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAG   90 (257)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5678889999888776655442      28999999999999999999999999999999


Q ss_pred             CccccCCC----CCChhHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          75 IAFKVNSS----EPFGSQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        75 ~~~~~~~~----~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                      ......+.    +.+.+.|++++++|+.|+++++++++|.|++        .++||++||..+..               
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~---------------  155 (257)
T 3tpc_A           91 TAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD---------------  155 (257)
T ss_dssp             CCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH---------------
T ss_pred             CCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc---------------
Confidence            87554432    5678999999999999999999999999864        47999999988843               


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                               +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++....
T Consensus       156 -------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~  204 (257)
T 3tpc_A          156 -------------------------GQIGQAAYAASKGGVAALTLPAARELARF----GIRVVTIAPGIFDTPMMAGM  204 (257)
T ss_dssp             -------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBSCC-----
T ss_pred             -------------------------CCCCCcchHHHHHHHHHHHHHHHHHHHHc----CeEEEEEEeCCCCChhhccC
Confidence                                     44566899999999999999999999987    79999999999999987643

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.5e-34  Score=236.01  Aligned_cols=174  Identities=26%  Similarity=0.394  Sum_probs=155.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        12 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~   90 (247)
T 2jah_A           12 ITGASSGIGEATARALAAE-GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVN   90 (247)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5688889999888777665543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |||.....++.+.+.++|++++++|+.|++.++++++|.|+ ++|+||++||..+..                       
T Consensus        91 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------------------  147 (247)
T 2jah_A           91 NAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRV-----------------------  147 (247)
T ss_dssp             CCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTC-----------------------
T ss_pred             CCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcC-----------------------
Confidence            99998777788899999999999999999999999999985 348999999998843                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                       +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|+|...
T Consensus       148 -----------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~  195 (247)
T 2jah_A          148 -----------------NVRNAAVYQATKFGVNAFSETLRQEVTER----GVRVVVIEPGTTDTELRGH  195 (247)
T ss_dssp             -----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBSSSGGGG
T ss_pred             -----------------CCCCCcHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEECCCCCCcchhc
Confidence                             34456899999999999999999999987    7889999999999998654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.8e-34  Score=239.67  Aligned_cols=176  Identities=22%  Similarity=0.310  Sum_probs=156.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.++...+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        37 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvn  115 (276)
T 3r1i_A           37 ITGASTGIGKKVALAYAEA-GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVC  115 (276)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 56889999999888887766542         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.....++.+.+.++|++++++|+.|+++++++++|.|++   .++||++||..+....                   
T Consensus       116 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~-------------------  176 (276)
T 3r1i_A          116 NAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN-------------------  176 (276)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------------------
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC-------------------
Confidence            999987777888899999999999999999999999999864   3899999998885421                   


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         ...+...|++||+++++|+++++.|+++.    ||+||+|+||+|+|++.+.
T Consensus       177 -------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~  224 (276)
T 3r1i_A          177 -------------------IPQQVSHYCTSKAAVVHLTKAMAVELAPH----QIRVNSVSPGYIRTELVEP  224 (276)
T ss_dssp             -------------------CSSCCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSTTTGG
T ss_pred             -------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEeeCCCcCCcccc
Confidence                               11245789999999999999999999987    7999999999999999764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.9e-34  Score=238.46  Aligned_cols=175  Identities=22%  Similarity=0.239  Sum_probs=148.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|. .|+++ +++.+.++...+++..         +|++|+++++++++++.+.++++|+||
T Consensus        13 VTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv   91 (259)
T 3edm_A           13 VAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLV   91 (259)
T ss_dssp             EETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             EECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            799999999999999999955 55555 6777777666655532         899999999999999999999999999


Q ss_pred             EccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          71 NNAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        71 ~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||||.. ...++.+.+.+.|++++++|+.|+++++++++|.|++.|+||++||..+..                      
T Consensus        92 ~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  149 (259)
T 3edm_A           92 HVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRD----------------------  149 (259)
T ss_dssp             ECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH----------------------
T ss_pred             ECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhcc----------------------
Confidence            999987 567788899999999999999999999999999998889999999987731                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                       .+.++...|++||+++++|+++++.|+++.     |+||+|+||+++|+|.+..
T Consensus       150 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-----I~vn~v~PG~v~T~~~~~~  198 (259)
T 3edm_A          150 -----------------GGGPGALAYATSKGAVMTFTRGLAKEVGPK-----IRVNAVCPGMISTTFHDTF  198 (259)
T ss_dssp             -----------------CCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-----CEEEEEEECCBCC------
T ss_pred             -----------------CCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-----CEEEEEEECCCcCcccccc
Confidence                             134456899999999999999999999874     7899999999999997654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-34  Score=240.60  Aligned_cols=175  Identities=24%  Similarity=0.352  Sum_probs=150.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++| +.+.++...+++..          +|++|+++++++++++.+.++++|+|
T Consensus        30 VTGas~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  108 (281)
T 3v2h_A           30 ITGSTSGIGLAIARTLAKA-GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADIL  108 (281)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            7999999999999999999 557888888 56666666555432          89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||.....++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||..+..                    
T Consensus       109 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  168 (281)
T 3v2h_A          109 VNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV--------------------  168 (281)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc--------------------
Confidence            99999987777888899999999999999999999999999864  48999999998844                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                          +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.+..
T Consensus       169 --------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~~  217 (281)
T 3v2h_A          169 --------------------ASPFKSAYVAAKHGIMGLTKTVALEVAES----GVTVNSICPGYVLTPLVEKQ  217 (281)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCC------
T ss_pred             --------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEECCCCcCcchhhh
Confidence                                44566899999999999999999999987    78999999999999987643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-34  Score=239.32  Aligned_cols=175  Identities=25%  Similarity=0.237  Sum_probs=156.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        13 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   91 (280)
T 3tox_A           13 VTGASSGIGRAAALLFARE-GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFN   91 (280)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 56799999999988887776642         8999999999999999999999999999


Q ss_pred             ccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.. ...++.+.+.+.|++++++|+.|+++++++++|.|++  .|+||++||..+..                     
T Consensus        92 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  150 (280)
T 3tox_A           92 NAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT---------------------  150 (280)
T ss_dssp             CCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT---------------------
T ss_pred             CCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc---------------------
Confidence            99986 3466778899999999999999999999999999864  47999999988842                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        .+.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++...
T Consensus       151 ------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~  199 (280)
T 3tox_A          151 ------------------AGFAGVAPYAASKAGLIGLVQALAVELGAR----GIRVNALLPGGTDTPANFA  199 (280)
T ss_dssp             ------------------BCCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBSSTTSGG
T ss_pred             ------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEECCCCCchhhh
Confidence                              134456899999999999999999999987    7999999999999998654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.5e-34  Score=239.09  Aligned_cols=174  Identities=26%  Similarity=0.355  Sum_probs=152.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++| ..|++.+| +.+.++...+.+..         +|++|+++++++++++.+.++++|+||
T Consensus        33 VTGas~gIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv  111 (269)
T 4dmm_A           33 VTGASRGIGRAIALELAAAG-AKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLV  111 (269)
T ss_dssp             ETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EECCCCHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999999999999999995 56666666 66666666555432         899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|+++++++++|.|+  +.|+||++||..+..                     
T Consensus       112 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  170 (269)
T 4dmm_A          112 NNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM---------------------  170 (269)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH---------------------
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC---------------------
Confidence            999998777788889999999999999999999999999985  358999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||+|+++|+++++.|+++.    ||+||+|+||+++|++...
T Consensus       171 -------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~  218 (269)
T 4dmm_A          171 -------------------GNPGQANYSAAKAGVIGLTKTVAKELASR----GITVNAVAPGFIATDMTSE  218 (269)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBTTSCSCH
T ss_pred             -------------------CCCCchhHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEEECCCcCccccc
Confidence                               34456899999999999999999999987    7889999999999998753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-34  Score=238.29  Aligned_cols=173  Identities=23%  Similarity=0.275  Sum_probs=155.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        16 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~   94 (264)
T 3ucx_A           16 ISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVIN   94 (264)
T ss_dssp             EESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence            7999999999999999999 56789999999888887766542         8999999999999999999999999999


Q ss_pred             ccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.. ...++.+.+.+.|++++++|+.|+++++++++|.|++ +|+||++||..+..                      
T Consensus        95 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  152 (264)
T 3ucx_A           95 NAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH----------------------  152 (264)
T ss_dssp             CCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC----------------------
T ss_pred             CCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc----------------------
Confidence            99985 4567778899999999999999999999999999864 58999999998843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|++||+++++|+++++.++++.    ||+||+|+||++.|++.+
T Consensus       153 ------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~  199 (264)
T 3ucx_A          153 ------------------SQAKYGAYKMAKSALLAMSQTLATELGEK----GIRVNSVLPGYIWGGTLK  199 (264)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEESSCBSHHHH
T ss_pred             ------------------CCCccHHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecCccccccHH
Confidence                              45566899999999999999999999987    788999999999998753

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.3e-34  Score=240.39  Aligned_cols=173  Identities=27%  Similarity=0.374  Sum_probs=156.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        29 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~  107 (279)
T 3sju_A           29 VTGVSSGIGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVN  107 (279)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence            7999999999999999999 56789999999888887776643         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcc--ccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP--LLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~--~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||.....++.+.+.+.|++++++|+.|+++++++++|  .|+  ..|+||++||..+..                    
T Consensus       108 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~--------------------  167 (279)
T 3sju_A          108 SAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ--------------------  167 (279)
T ss_dssp             CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS--------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc--------------------
Confidence            99998778888899999999999999999999999999  564  348999999998843                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|+|.+
T Consensus       168 --------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~  214 (279)
T 3sju_A          168 --------------------GVMYAAPYTASKHGVVGFTKSVGFELAKT----GITVNAVCPGYVETPMAE  214 (279)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEESSBCSHHHH
T ss_pred             --------------------CCCCChhHHHHHHHHHHHHHHHHHHHHhh----CcEEEEEeeCcccchHHH
Confidence                                45566899999999999999999999987    799999999999998753

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=5.8e-34  Score=236.99  Aligned_cols=173  Identities=25%  Similarity=0.276  Sum_probs=154.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        16 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg   94 (271)
T 3tzq_B           16 ITGACGGIGLETSRVLARA-GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAA   94 (271)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5688899999988887776653      28999999999999999999999999999999


Q ss_pred             Ccc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          75 IAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        75 ~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ...  ...+.+.+.+.|++++++|+.|+++++++++|.|++  .++||++||..++.                       
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------------------  151 (271)
T 3tzq_B           95 HSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA-----------------------  151 (271)
T ss_dssp             CCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------------------
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC-----------------------
Confidence            863  344667889999999999999999999999999964  48999999998844                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                       +.++...|++||+++++|+++++.++.++    ||+||+|+||++.|++..
T Consensus       152 -----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          152 -----------------AYDMSTAYACTKAAIETLTRYVATQYGRH----GVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             -----------------BCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTTC
T ss_pred             -----------------CCCCChHHHHHHHHHHHHHHHHHHHHhhc----CEEEEEEEeCCCcCcccc
Confidence                             44556899999999999999999999988    789999999999999876

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=4.1e-34  Score=240.62  Aligned_cols=174  Identities=24%  Similarity=0.259  Sum_probs=156.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.          .+|++|+++++++++++.+.++++|+||
T Consensus        46 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  124 (293)
T 3rih_A           46 VTGGTKGIGRGIATVFARA-GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVC  124 (293)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 5588899999998888777653          2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..                     
T Consensus       125 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~---------------------  183 (293)
T 3rih_A          125 ANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV---------------------  183 (293)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT---------------------
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc---------------------
Confidence            9999988888889999999999999999999999999999864  48999999988731                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        .+.++...|++||+++++|+++++.++++.    ||+||+|+||++.|++..
T Consensus       184 ------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~  231 (293)
T 3rih_A          184 ------------------TGYPGWSHYGASKAAQLGFMRTAAIELAPR----GVTVNAILPGNILTEGLV  231 (293)
T ss_dssp             ------------------BBCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCHHHH
T ss_pred             ------------------CCCCCCHHHHHHHHHHHHHHHHHHHHHhhh----CeEEEEEecCCCcCcchh
Confidence                              134456899999999999999999999988    788999999999998653

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-34  Score=241.50  Aligned_cols=175  Identities=25%  Similarity=0.293  Sum_probs=142.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEe-cCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~-r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++| ..|++++ ++.+.++...+++..         +|++|+++++++++++.+.++++|+||
T Consensus        34 VTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  112 (280)
T 4da9_A           34 VTGGRRGIGLGIARALAASG-FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLV  112 (280)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEE
T ss_pred             EecCCCHHHHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999999999999999995 5666666 477777766655432         899999999999999999999999999


Q ss_pred             EccCC--ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          71 NNAAI--AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        71 ~~ag~--~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ||||.  ....++.+.+.++|++++++|+.|+++++++++|.|++     .++||++||..+..                
T Consensus       113 nnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------------  176 (280)
T 4da9_A          113 NNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM----------------  176 (280)
T ss_dssp             EECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------------
T ss_pred             ECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc----------------
Confidence            99998  44567778899999999999999999999999999854     57999999998844                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                              +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++....
T Consensus       177 ------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~  225 (280)
T 4da9_A          177 ------------------------TSPERLDYCMSKAGLAAFSQGLALRLAET----GIAVFEVRPGIIRSDMTAAV  225 (280)
T ss_dssp             ---------------------------CCHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCC------
T ss_pred             ------------------------CCCCccHHHHHHHHHHHHHHHHHHHHHHh----CcEEEEEeecCCcCCchhhc
Confidence                                    34456899999999999999999999987    79999999999999997654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.1e-33  Score=238.13  Aligned_cols=175  Identities=19%  Similarity=0.203  Sum_probs=153.5

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh--------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL--------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~--------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++  |||++++++|+++ +..|++++|+.+..+...+..        ..+|++|+++++++++++.+.+++||+||
T Consensus        35 VTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lV  113 (296)
T 3k31_A           35 IIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVV  113 (296)
T ss_dssp             EECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred             EEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799986  9999999999999 567888999875444332221        23899999999999999999999999999


Q ss_pred             EccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||+...    .++.+.+.+.|++++++|+.|+++++++++|.|++.|+||++||..+..                   
T Consensus       114 nnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~-------------------  174 (296)
T 3k31_A          114 HAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK-------------------  174 (296)
T ss_dssp             ECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-------------------
T ss_pred             ECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc-------------------
Confidence            99999764    6677889999999999999999999999999998899999999998843                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                           +.++...|++||+|+++|+++++.|+++.    ||+||+|+||+++|++....
T Consensus       175 ---------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~~  223 (296)
T 3k31_A          175 ---------------------VVPHYNVMGVCKAALEASVKYLAVDLGKQ----QIRVNAISAGPVRTLASSGI  223 (296)
T ss_dssp             ---------------------CCTTTTHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECCCCCSSCCSC
T ss_pred             ---------------------CCCCchhhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEECCCcCchhhcc
Confidence                                 45566899999999999999999999987    79999999999999987653

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=4e-34  Score=237.51  Aligned_cols=174  Identities=28%  Similarity=0.390  Sum_probs=148.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++.+|+.+++++..+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        32 VTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg  110 (266)
T 3grp_A           32 VTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAG  110 (266)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5688889999888887766543      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.++|++++++|+.|+++++++++|.|+  +.++||++||..+..                         
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~-------------------------  165 (266)
T 3grp_A          111 ITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV-------------------------  165 (266)
T ss_dssp             CC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------------------------
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC-------------------------
Confidence            98777888899999999999999999999999999985  358999999998844                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     +.++...|++||+|+++|+++++.|+++.    ||+||+|+||+++|++.+.
T Consensus       166 ---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~  213 (266)
T 3grp_A          166 ---------------GNPGQTNYCAAKAGLIGFSKALAQEIASR----NITVNCIAPGFIKSAMTDK  213 (266)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSHHHHT
T ss_pred             ---------------CCCCchhHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEeeCcCCCchhhc
Confidence                           33455899999999999999999999987    7999999999999998654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2e-34  Score=239.34  Aligned_cols=175  Identities=22%  Similarity=0.290  Sum_probs=154.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh---hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK---LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~---~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++.....   +..+|++|+++++++++++.+.++++|+||||||...
T Consensus        21 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~   99 (266)
T 3p19_A           21 ITGASSGIGEAIARRFSEE-GHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMML   99 (266)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCC
Confidence            7999999999999999999 56788889987766543221   2238999999999999999999999999999999988


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ..++.+.+.+.|++++++|+.|+++++++++|.|++  .|+||++||..+..                            
T Consensus       100 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----------------------------  151 (266)
T 3p19_A          100 LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK----------------------------  151 (266)
T ss_dssp             CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------------------------
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC----------------------------
Confidence            888888999999999999999999999999999863  48999999998843                            


Q ss_pred             HHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                  +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++....
T Consensus       152 ------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~  200 (266)
T 3p19_A          152 ------------TFPDHAAYCGTKFAVHAISENVREEVAAS----NVRVMTIAPSAVKTELLSHT  200 (266)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBSSSGGGGC
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEeeCccccchhhcc
Confidence                        45566899999999999999999999987    78899999999999987654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-34  Score=240.77  Aligned_cols=173  Identities=27%  Similarity=0.381  Sum_probs=155.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC--CeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD--GIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~--~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      ||||++|||++++++|+++|.  ..|++++|+.+.+++..+++.           .+|++|+++++++++++.+.+++||
T Consensus        38 VTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  117 (287)
T 3rku_A           38 ITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDID  117 (287)
T ss_dssp             EESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCC
T ss_pred             EecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999965  389999999988887766553           2899999999999999999999999


Q ss_pred             EEEEccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          68 VLVNNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        68 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +||||||... ..++.+.+.++|++++++|+.|+++++++++|.|+  +.|+||++||..+..                 
T Consensus       118 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------------  180 (287)
T 3rku_A          118 ILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD-----------------  180 (287)
T ss_dssp             EEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------------
T ss_pred             EEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC-----------------
Confidence            9999999875 56678889999999999999999999999999995  458999999998843                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                             +.++...|++||+|+++|+++++.|+++.    ||+||+|+||+|+|++.
T Consensus       181 -----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~  226 (287)
T 3rku_A          181 -----------------------AYPTGSIYCASKFAVGAFTDSLRKELINT----KIRVILIAPGLVETEFS  226 (287)
T ss_dssp             -----------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTS----SCEEEEEEESCEESSHH
T ss_pred             -----------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEeCCcCcCccc
Confidence                                   45566899999999999999999999987    78999999999999974

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=7.9e-34  Score=236.54  Aligned_cols=177  Identities=19%  Similarity=0.238  Sum_probs=148.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-------hHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-------GQEALEKLQ---------KLDILDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-------~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~   64 (230)
                      ||||++|||++++++|+++ +..|++++|+.++       ++...+.+.         .+|++|+++++++++++.+.++
T Consensus        11 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   89 (274)
T 3e03_A           11 ITGASRGIGLAIALRAARD-GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFG   89 (274)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            7999999999999999999 4588889998754       444444332         2899999999999999999999


Q ss_pred             CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          65 GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        65 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                      ++|+||||||.....++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+.....            
T Consensus        90 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------  157 (274)
T 3e03_A           90 GIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW------------  157 (274)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH------------
T ss_pred             CCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC------------
Confidence            9999999999987777888999999999999999999999999999964  48999999998854210            


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCC-ccccCCCCCC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPG-YVNTDMSSGK  220 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG-~v~t~~~~~~  220 (230)
                                                .++...|++||+++++|+++++.++++.    ||+||+|+|| +++|+|.+..
T Consensus       158 --------------------------~~~~~~Y~asKaal~~l~~~la~e~~~~----gI~vn~v~PG~~v~T~~~~~~  206 (274)
T 3e03_A          158 --------------------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQ----GVAINALWPRTVIATDAINML  206 (274)
T ss_dssp             --------------------------HHHCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEECSBCBCC------
T ss_pred             --------------------------CCCCchHHHHHHHHHHHHHHHHHHhhhc----CEEEEEEECCcccccchhhhc
Confidence                                      1134789999999999999999999988    7889999999 6999987543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.6e-33  Score=235.93  Aligned_cols=174  Identities=20%  Similarity=0.208  Sum_probs=151.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-------hhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-------RGQEALEKLQK---------LDILDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-------~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~   64 (230)
                      ||||++|||++++++|+++ +..|++++|+.+       .+++..+++..         +|++|+++++++++++.+.++
T Consensus        14 VTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   92 (285)
T 3sc4_A           14 ISGGSRGIGLAIAKRVAAD-GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFG   92 (285)
T ss_dssp             EESCSSHHHHHHHHHHHTT-TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            7999999999999999999 558888999876       34444444432         899999999999999999999


Q ss_pred             CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          65 GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        65 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                      ++|+||||||.....++.+.+.+.|++++++|+.|+++++++++|.|++  .++||++||..+....             
T Consensus        93 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------------  159 (285)
T 3sc4_A           93 GIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK-------------  159 (285)
T ss_dssp             CCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-------------
Confidence            9999999999988888889999999999999999999999999999975  4799999999885421             


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCC-ccccCCCC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPG-YVNTDMSS  218 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG-~v~t~~~~  218 (230)
                                                .++...|++||+++++|+++++.|+++.    ||+||+|+|| .++|++.+
T Consensus       160 --------------------------~~~~~~Y~asKaal~~~~~~la~e~~~~----gI~vn~v~PG~~v~t~~~~  206 (285)
T 3sc4_A          160 --------------------------WLRPTPYMMAKYGMTLCALGIAEELRDA----GIASNTLWPRTTVATAAVQ  206 (285)
T ss_dssp             --------------------------GSCSHHHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEECSSCBCCHHHH
T ss_pred             --------------------------CCCCchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEeCCCccccHHHH
Confidence                                      1345899999999999999999999987    7889999999 68888643

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.2e-33  Score=232.56  Aligned_cols=172  Identities=26%  Similarity=0.328  Sum_probs=152.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccC--CCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDI--LDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~--s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..          +|+  +|+++++++++++.+.++++|+
T Consensus        17 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   95 (252)
T 3f1l_A           17 VTGASDGIGREAAMTYARY-GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDG   95 (252)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSE
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999 55888999999888777665532          788  9999999999999999999999


Q ss_pred             EEEccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          69 LVNNAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        69 lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||||.. ...++.+.+.+.|++++++|+.|+++++++++|.|++  .++||++||..+..                  
T Consensus        96 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------------  157 (252)
T 3f1l_A           96 VLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ------------------  157 (252)
T ss_dssp             EEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS------------------
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc------------------
Confidence            99999985 3467888999999999999999999999999999964  48999999998844                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                            +.++...|++||+++++|+++++.++++.     |+||+|+||+++|+|..
T Consensus       158 ----------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~-----irvn~v~PG~v~t~~~~  203 (252)
T 3f1l_A          158 ----------------------GRANWGAYAASKFATEGMMQVLADEYQQR-----LRVNCINPGGTRTAMRA  203 (252)
T ss_dssp             ----------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTT-----CEEEEEECCSBSSHHHH
T ss_pred             ----------------------CCCCCchhHHHHHHHHHHHHHHHHHhcCC-----cEEEEEecCcccCchhh
Confidence                                  45566899999999999999999999874     78999999999999753

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=6.8e-35  Score=241.55  Aligned_cols=173  Identities=18%  Similarity=0.188  Sum_probs=146.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC---cchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD---ASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~---~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||++++++|+++ +..|++++|.   .+.+++..+++..         +|++|+++++++++++.+.++++|+
T Consensus        16 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   94 (262)
T 3ksu_A           16 IAGGIKNLGALTAKTFALE-SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDI   94 (262)
T ss_dssp             EETCSSHHHHHHHHHHTTS-SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEE
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999 4567776554   4455555555432         8999999999999999999999999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||||.....++.+.+.++|++++++|+.|+++++++++|.|++.++||++||..+..                     
T Consensus        95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~---------------------  153 (262)
T 3ksu_A           95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA---------------------  153 (262)
T ss_dssp             EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH---------------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc---------------------
Confidence            99999998888888899999999999999999999999999998889999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|++||+|+++|+++++.++++.    ||+||+|+||+++|+|..
T Consensus       154 -------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~  200 (262)
T 3ksu_A          154 -------------------YTGFYSTYAGNKAPVEHYTRAASKELMKQ----QISVNAIAPGPMDTSFFY  200 (262)
T ss_dssp             -------------------HHCCCCC-----CHHHHHHHHHHHHTTTT----TCEEEEEEECCCCTHHHH
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEeeCCCcCcccc
Confidence                               22345889999999999999999999987    788999999999999754

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.9e-34  Score=237.96  Aligned_cols=174  Identities=24%  Similarity=0.253  Sum_probs=154.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.            .+|++|+++++++++++.+.++++|+
T Consensus        16 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (281)
T 3svt_A           16 VTGGGSGIGKGVAAGLVAA-GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHG   94 (281)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999 5678889999988887766653            28999999999999999999999999


Q ss_pred             EEEccCC-ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          69 LVNNAAI-AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        69 lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||||. ....++.+.+.+.|++++++|+.|+++++++++|.|++  .|+||++||..+..                  
T Consensus        95 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------  156 (281)
T 3svt_A           95 VVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN------------------  156 (281)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS------------------
T ss_pred             EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC------------------
Confidence            9999998 44566778899999999999999999999999999854  47999999988743                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                            +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.+.
T Consensus       157 ----------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~  204 (281)
T 3svt_A          157 ----------------------THRWFGAYGVTKSAVDHLMQLAADELGAS----WVRVNSIRPGLIRTDLVAA  204 (281)
T ss_dssp             ----------------------CCTTCTHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGHH
T ss_pred             ----------------------CCCCChhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCcCcCcchhh
Confidence                                  44556899999999999999999999987    7999999999999998653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=9.7e-34  Score=239.10  Aligned_cols=173  Identities=21%  Similarity=0.271  Sum_probs=157.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        36 VTGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvn  114 (301)
T 3tjr_A           36 VTGGASGIGLATATEFARR-GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFS  114 (301)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            7999999999999999999 56899999999988887766542         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.....++.+.+.++|++++++|+.|++.++++++|.|++   .++||++||..+..                     
T Consensus       115 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  173 (301)
T 3tjr_A          115 NAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV---------------------  173 (301)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS---------------------
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC---------------------
Confidence            999988788888999999999999999999999999999864   57999999998854                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|++||+++++|+++++.++++.    ||+|++|+||+++|+|..
T Consensus       174 -------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~  220 (301)
T 3tjr_A          174 -------------------PNAGLGTYGVAKYGVVGLAETLAREVKPN----GIGVSVLCPMVVETKLVS  220 (301)
T ss_dssp             -------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEECCSCCCSSHHH
T ss_pred             -------------------CCCCchHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEECCcccccccc
Confidence                               45566899999999999999999999987    789999999999999754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=5.8e-34  Score=237.70  Aligned_cols=171  Identities=21%  Similarity=0.286  Sum_probs=153.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.          .+|++|+++++++++++.+.++++|+||
T Consensus        32 VTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv  110 (277)
T 4fc7_A           32 ITGGGSGIGFRIAEIFMRH-GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILI  110 (277)
T ss_dssp             EETTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 5588899999888777666553          2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.+.|++++++|+.|+++++++++|.|+  +.++||++||..+..                     
T Consensus       111 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  169 (277)
T 4fc7_A          111 NCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR---------------------  169 (277)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH---------------------
T ss_pred             ECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC---------------------
Confidence            999988777788889999999999999999999999999885  358999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                         +.++...|++||+++++|+++++.++++.    ||+||+|+||++.|++
T Consensus       170 -------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~  214 (277)
T 4fc7_A          170 -------------------GQALQVHAGSAKAAVDAMTRHLAVEWGPQ----NIRVNSLAPGPISGTE  214 (277)
T ss_dssp             -------------------TCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBSSSH
T ss_pred             -------------------CCCCcHHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEECCEecch
Confidence                               34456899999999999999999999988    7999999999999985

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-33  Score=231.19  Aligned_cols=175  Identities=26%  Similarity=0.377  Sum_probs=157.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+.+.+         +|++|+++++++++++.+.++++|+|||
T Consensus        10 ITGas~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   88 (247)
T 3lyl_A           10 VTGASRGIGFEVAHALASK-GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVN   88 (247)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 56899999999888777665532         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||...+.++.+.+.++|++++++|+.|++.++++++|.|+  +.++||++||..+..                      
T Consensus        89 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  146 (247)
T 3lyl_A           89 NAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA----------------------  146 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------------
T ss_pred             CCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc----------------------
Confidence            99998777778889999999999999999999999999885  358999999988743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        +.++...|++||+++++|+++++.++...    ||+||+|+||+++|++.+..
T Consensus       147 ------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  195 (247)
T 3lyl_A          147 ------------------GNPGQTNYCAAKAGVIGFSKSLAYEVASR----NITVNVVAPGFIATDMTDKL  195 (247)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTTTS
T ss_pred             ------------------CCCCcHHHHHHHHHHHHHHHHHHHHHHHc----CeEEEEEeeCcEecccchhc
Confidence                              44566899999999999999999999987    78999999999999997654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.7e-33  Score=232.85  Aligned_cols=175  Identities=29%  Similarity=0.337  Sum_probs=150.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        34 ITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~  112 (262)
T 3rkr_A           34 VTGASRGIGAAIARKLGSL-GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVN  112 (262)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 56789999999888877666532         8999999999999999999999999999


Q ss_pred             ccCC-ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAI-AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~-~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||. ....++.+.+.++|++++++|+.|++.++++++|.|+  +.++||++||..+..                     
T Consensus       113 ~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  171 (262)
T 3rkr_A          113 NAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN---------------------  171 (262)
T ss_dssp             CCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC---------------------
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC---------------------
Confidence            9998 4456677889999999999999999999999999885  348999999999844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.++...|++||+++++|+++++.+++..    ||+||+|+||+++|+|....
T Consensus       172 -------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  220 (262)
T 3rkr_A          172 -------------------PVADGAAYTASKWGLNGLMTSAAEELRQH----QVRVSLVAPGSVRTEFGVGL  220 (262)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCC--------
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCCCcCCccccc
Confidence                               45566899999999999999999999987    78899999999999997653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.3e-33  Score=239.94  Aligned_cols=172  Identities=30%  Similarity=0.375  Sum_probs=150.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC------------cchhHHHHHhhh---------cccCCCHHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD------------ASRGQEALEKLQ---------KLDILDKNSIKALHDHL   59 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~------------~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~   59 (230)
                      ||||++|||+++++.|+++ +..|++++|+            .+.+++..+.+.         .+|++|+++++++++++
T Consensus        51 VTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  129 (317)
T 3oec_A           51 ITGAARGQGRTHAVRLAQD-GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEA  129 (317)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            7999999999999999999 5577777665            444454444432         28999999999999999


Q ss_pred             HhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHH
Q psy7994          60 EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALK  136 (230)
Q Consensus        60 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~  136 (230)
                      .+.+++||+||||||.....++.+.+.++|++++++|+.|+++++++++|.|++   .|+||++||..+..         
T Consensus       130 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~---------  200 (317)
T 3oec_A          130 LAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR---------  200 (317)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS---------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC---------
Confidence            999999999999999988888889999999999999999999999999999853   48999999998844         


Q ss_pred             HHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         137 KKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                                     +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++
T Consensus       201 -------------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~  245 (317)
T 3oec_A          201 -------------------------------GAPGQSHYAASKHGVQGLMLSLANEVGRH----NIRVNSVNPGAVNTEM  245 (317)
T ss_dssp             -------------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSHH
T ss_pred             -------------------------------CCCCCcchHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCcccCcc
Confidence                                           45566899999999999999999999988    7999999999999987


Q ss_pred             C
Q psy7994         217 S  217 (230)
Q Consensus       217 ~  217 (230)
                      .
T Consensus       246 ~  246 (317)
T 3oec_A          246 A  246 (317)
T ss_dssp             H
T ss_pred             c
Confidence            4

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-33  Score=231.68  Aligned_cols=174  Identities=25%  Similarity=0.391  Sum_probs=153.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++| +++++++..+++.         .+|++|+++++++++++.+.++++|+||
T Consensus         9 VTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   87 (246)
T 2uvd_A            9 VTGASRGIGRAIAIDLAKQ-GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILV   87 (246)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 557777777 7777766655542         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                     
T Consensus        88 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  146 (246)
T 2uvd_A           88 NNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT---------------------  146 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH---------------------
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC---------------------
Confidence            9999987777778899999999999999999999999999863  48999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||++++.++++++.++.+.    ||+||+|+||+++|++...
T Consensus       147 -------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  194 (246)
T 2uvd_A          147 -------------------GNPGQANYVAAKAGVIGLTKTSAKELASR----NITVNAIAPGFIATDMTDV  194 (246)
T ss_dssp             -------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBGGGCSSC
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeccccCcchhh
Confidence                               33456899999999999999999999987    7999999999999998764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.4e-33  Score=235.21  Aligned_cols=172  Identities=26%  Similarity=0.308  Sum_probs=154.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++..         +|++|+++++++++++.+. +++|+|||
T Consensus        38 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvn  115 (275)
T 4imr_A           38 VTGSSRGIGAAIAEGLAGA-GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-APVDILVI  115 (275)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEE
Confidence            7999999999999999999 56899999999888877766532         8999999999999999887 99999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.++|++++++|+.|+++++++++|.|+  +.|+||++||..+..                      
T Consensus       116 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----------------------  173 (275)
T 4imr_A          116 NASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR----------------------  173 (275)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------------
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC----------------------
Confidence            99998778888899999999999999999999999999985  458999999988843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +..+...|++||+++++|+++++.++++.    ||+||+|+||+++|++..
T Consensus       174 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~  220 (275)
T 4imr_A          174 ------------------PKSVVTAYAATKAAQHNLIQSQARDFAGD----NVLLNTLAPGLVDTDRNA  220 (275)
T ss_dssp             ------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCSHHHH
T ss_pred             ------------------CCCCchhhHHHHHHHHHHHHHHHHHhccc----CcEEEEEEeccccCcccc
Confidence                              34455789999999999999999999987    799999999999998753

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2e-33  Score=232.01  Aligned_cols=175  Identities=21%  Similarity=0.219  Sum_probs=147.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++..      +|++|+++++++++++.+.++++|+||||||
T Consensus        14 ITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag   92 (261)
T 3n74_A           14 ITGAGSGFGEGMAKRFAKG-GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAG   92 (261)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCc
Confidence            7999999999999999999 56799999999988887766532      8999999999999999999999999999999


Q ss_pred             Ccc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC------CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          75 IAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS------HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        75 ~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~------~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ... ..++.+.+.+.|++++++|+.|++.++++++|.|++      .++||++||..+..                    
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--------------------  152 (261)
T 3n74_A           93 IGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR--------------------  152 (261)
T ss_dssp             CCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS--------------------
T ss_pred             cCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC--------------------
Confidence            875 456667788999999999999999999999999864      46899999998843                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                          +.++...|++||+++++|+++++.++.+.    ||+||+|+||+++|++....
T Consensus       153 --------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  201 (261)
T 3n74_A          153 --------------------PRPNLAWYNATKGWVVSVTKALAIELAPA----KIRVVALNPVAGETPLLTTF  201 (261)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC----------
T ss_pred             --------------------CCCCccHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCcccChhhhhh
Confidence                                44556889999999999999999999987    78999999999999987654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.9e-33  Score=235.38  Aligned_cols=175  Identities=19%  Similarity=0.215  Sum_probs=147.1

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---Hhh-----hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---EKL-----QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~~~-----~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+  +|||+++++.|+++ +..|++++|+....+...   +..     ..+|++|+++++++++++.+.+++||+||
T Consensus        36 VTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lV  114 (293)
T 3grk_A           36 ILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDFLV  114 (293)
T ss_dssp             EECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEE
T ss_pred             EEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999  56999999999999 567888888854332222   211     12899999999999999999999999999


Q ss_pred             EccCCcc----ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAF----KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~----~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||+..    ..++.+.+.+.|++++++|+.+++.++++++|.|++.|+||++||..+..                   
T Consensus       115 nnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~-------------------  175 (293)
T 3grk_A          115 HAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK-------------------  175 (293)
T ss_dssp             ECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS-------------------
T ss_pred             ECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc-------------------
Confidence            9999875    46677889999999999999999999999999999899999999998844                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                           +.++...|++||+|+++|+++++.++++.    ||+||+|+||+++|++....
T Consensus       176 ---------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~  224 (293)
T 3grk_A          176 ---------------------VMPNYNVMGVAKAALEASVKYLAVDLGPQ----NIRVNAISAGPIKTLAASGI  224 (293)
T ss_dssp             ---------------------BCTTTTHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCC------
T ss_pred             ---------------------CCCchHHHHHHHHHHHHHHHHHHHHHhHh----CCEEEEEecCCCcchhhhcc
Confidence                                 44556899999999999999999999987    79999999999999987654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=7.5e-34  Score=233.46  Aligned_cols=173  Identities=29%  Similarity=0.387  Sum_probs=149.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus         5 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg   83 (248)
T 3asu_A            5 VTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAG   83 (248)
T ss_dssp             ETTTTSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCC
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            7999999999999999999 5688899999888877666542      28999999999999999999999999999999


Q ss_pred             Ccc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          75 IAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        75 ~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      ... ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..                        
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------------------------  139 (248)
T 3asu_A           84 LALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW------------------------  139 (248)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------------------------
T ss_pred             cCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc------------------------
Confidence            863 456677889999999999999999999999999953  48999999988843                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc-cCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN-TDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~-t~~~~  218 (230)
                                      +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++ |+|..
T Consensus       140 ----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~gT~~~~  187 (248)
T 3asu_A          140 ----------------PYAGGNVYGATKAFVRQFSLNLRTDLHGT----AVRVTDIEPGLVGGTEFSN  187 (248)
T ss_dssp             ----------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTS----CCEEEEEEECSBCC-----
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeccccccCcchh
Confidence                            44556899999999999999999999887    7899999999999 99864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.3e-34  Score=234.81  Aligned_cols=176  Identities=22%  Similarity=0.262  Sum_probs=153.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++++|+.+......-.+..+|++|+++++++++++.+.++++|+||||||.....+
T Consensus        33 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~  111 (260)
T 3un1_A           33 ITGASQGIGAGLVRAYRDR-NYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKP  111 (260)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
Confidence            7999999999999999999 568888899876554332233348999999999999999999999999999999987777


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                               
T Consensus       112 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-------------------------------  160 (260)
T 3un1_A          112 FVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQ-------------------------------  160 (260)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTS-------------------------------
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcc-------------------------------
Confidence            888899999999999999999999999999864  48999999987742                               


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                             ..+..+...|++||+++++|+++++.++++.    ||+||+|+||++.|++...
T Consensus       161 -------~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~  210 (260)
T 3un1_A          161 -------PMVGMPSALASLTKGGLNAVTRSLAMEFSRS----GVRVNAVSPGVIKTPMHPA  210 (260)
T ss_dssp             -------CBTTCCCHHHHHHHHHHHHHHHHHHHHTTTT----TEEEEEEEECCBCCTTSCG
T ss_pred             -------CCCCCccHHHHHHHHHHHHHHHHHHHHhCcC----CeEEEEEeecCCCCCCCCH
Confidence                   1134456899999999999999999999987    7999999999999998653

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-33  Score=234.66  Aligned_cols=222  Identities=32%  Similarity=0.470  Sum_probs=167.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCH-HHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDK-NSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~-~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++..          +|++|+ ++++.+++++.+.+++||+|
T Consensus        17 ITGas~GIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~l   95 (311)
T 3o26_A           17 VTGGNKGIGFEICKQLSSN-GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDIL   95 (311)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEE
Confidence            7999999999999999999 56899999999988877766542          899998 99999999999999999999


Q ss_pred             EEccCCccc------------------------------cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceE
Q psy7994          70 VNNAAIAFK------------------------------VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRV  117 (230)
Q Consensus        70 v~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~i  117 (230)
                      |||||+...                              ..+.+.+.+.|+++|++|+.|++.++++++|.|++  .++|
T Consensus        96 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~I  175 (311)
T 3o26_A           96 VNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRI  175 (311)
T ss_dssp             EECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEE
T ss_pred             EECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeE
Confidence            999998632                              23455678999999999999999999999999964  4799


Q ss_pred             EEecCCCccccccchHHHHHHh-hhhchhHHHHHHHHHHHHHHhhcCCCc-CCC-CCCchhhHHHHHHHHHHHHHHHhhh
Q psy7994         118 VNVSSSCGHLCHVTSEALKKKL-LHEIKSVEELSALMNEFVELAQDGSHT-KGG-WPNSAYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       118 i~~sS~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~Y~~sK~a~~~l~~~la~~~~  194 (230)
                      |++||..+.............+ .......+........+...-...... .++ ++...|++||+++++|+++++.++.
T Consensus       176 V~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~  255 (311)
T 3o26_A          176 VNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIP  255 (311)
T ss_dssp             EEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             EEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhhcC
Confidence            9999999866433221111100 011111222222222222222222222 222 2457899999999999999999985


Q ss_pred             hhhccCCeEEEEecCCccccCCCCCCCCCCccccC
Q psy7994         195 QDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDN  229 (230)
Q Consensus       195 ~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~a  229 (230)
                      .      ++||+|+||+|+|+|.+...+.++++++
T Consensus       256 ~------i~v~~v~PG~v~T~~~~~~~~~~~~~~a  284 (311)
T 3o26_A          256 K------FQVNCVCPGLVKTEMNYGIGNYTAEEGA  284 (311)
T ss_dssp             T------SEEEEECCCSBCSGGGTTCCSBCHHHHH
T ss_pred             C------ceEEEecCCceecCCcCCCCCCCHHHHH
Confidence            3      7899999999999999888877777654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2e-33  Score=236.46  Aligned_cols=171  Identities=23%  Similarity=0.232  Sum_probs=149.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc--chhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA--SRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~--~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|+.  ...+...+.+.         .+|++|+++++++++++.+.++++|+|
T Consensus        54 VTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  132 (294)
T 3r3s_A           54 VTGGDSGIGRAAAIAYARE-GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDIL  132 (294)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7999999999999999999 55777777763  33444333332         289999999999999999999999999


Q ss_pred             EEccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          70 VNNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        70 v~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||||... ..++.+.+.++|++++++|+.|+++++++++|.|+++|+||++||..++.                     
T Consensus       133 v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~---------------------  191 (294)
T 3r3s_A          133 ALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ---------------------  191 (294)
T ss_dssp             EECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS---------------------
T ss_pred             EECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc---------------------
Confidence            99999864 45677889999999999999999999999999999889999999998844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                         +.++...|++||+++++|+++++.|+++.    ||+||+|+||+|+|++
T Consensus       192 -------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          192 -------------------PSPHLLDYAATKAAILNYSRGLAKQVAEK----GIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSHH
T ss_pred             -------------------CCCCchHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCcCcccc
Confidence                               45566899999999999999999999987    7889999999999987

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-33  Score=231.79  Aligned_cols=175  Identities=29%  Similarity=0.376  Sum_probs=153.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEe-cCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~-r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|. .|++.+ |+.+..+...+.+..         +|++|+++++++++++.+.++++|+||
T Consensus        18 ITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv   96 (256)
T 3ezl_A           18 VTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLV   96 (256)
T ss_dssp             ETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             EECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            799999999999999999954 555555 777766665554432         899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                     
T Consensus        97 ~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  155 (256)
T 3ezl_A           97 NNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK---------------------  155 (256)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG---------------------
T ss_pred             ECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc---------------------
Confidence            9999988788888999999999999999999999999999864  48999999998844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.++...|++||+++++|+++++.+++..    ||+||+|+||+++|++.+..
T Consensus       156 -------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  204 (256)
T 3ezl_A          156 -------------------GQFGQTNYSTAKAGIHGFTMSLAQEVATK----GVTVNTVSPGYIGTDMVKAI  204 (256)
T ss_dssp             -------------------SCSCCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHTS
T ss_pred             -------------------CCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCEEEEEEECcccCcccccc
Confidence                               44566899999999999999999999987    79999999999999986543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-33  Score=228.44  Aligned_cols=173  Identities=23%  Similarity=0.243  Sum_probs=153.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||++++++|+++ +..|++++|+++++++..+++    ..+|++|+++++++++++.+.++++|+||||||..
T Consensus        10 VTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~   88 (245)
T 1uls_A           10 ITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGIT   88 (245)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            7999999999999999999 568888999988877765543    23899999999999999999999999999999987


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      ...++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||.. ..                           
T Consensus        89 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~---------------------------  140 (245)
T 1uls_A           89 RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YL---------------------------  140 (245)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GG---------------------------
T ss_pred             CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hc---------------------------
Confidence            7677778899999999999999999999999999965  38999999977 43                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                   +.++...|++||+++.+|+++++.++.+.    ||+||+|+||+++|++...
T Consensus       141 -------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~  188 (245)
T 1uls_A          141 -------------GNLGQANYAASMAGVVGLTRTLALELGRW----GIRVNTLAPGFIETRMTAK  188 (245)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTSS
T ss_pred             -------------CCCCchhHHHHHHHHHHHHHHHHHHHhHh----CeEEEEEEeCcCcCcchhh
Confidence                         23345899999999999999999999987    7999999999999998764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=2e-33  Score=232.11  Aligned_cols=174  Identities=25%  Similarity=0.360  Sum_probs=150.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-hHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-GQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++++.|+++ +..|++++|+.+. ++...+++.          .+|++|+++++++++++.+.++++|+|
T Consensus         9 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   87 (260)
T 1x1t_A            9 VTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDIL   87 (260)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EeCCCcHHHHHHHHHHHHc-CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            7999999999999999999 5678888998876 666554432          289999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||.....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+..                    
T Consensus        88 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  147 (260)
T 1x1t_A           88 VNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--------------------  147 (260)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc--------------------
Confidence            99999876667778889999999999999999999999999864  48999999998843                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                          +.++...|++||++++.|+++++.++++.    ||+||+|+||+++|++...
T Consensus       148 --------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  195 (260)
T 1x1t_A          148 --------------------ASANKSAYVAAKHGVVGFTKVTALETAGQ----GITANAICPGWVRTPLVEK  195 (260)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCC-----
T ss_pred             --------------------CCCCCchHHHHHHHHHHHHHHHHHHhccC----CEEEEEEeecCccCchHHH
Confidence                                34456899999999999999999999987    7999999999999998654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-33  Score=232.15  Aligned_cols=174  Identities=28%  Similarity=0.404  Sum_probs=151.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhc-CCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEH-GGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~-~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.         .+|++|+++++++++++.+.+ +++|+||
T Consensus        26 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv  104 (273)
T 1ae1_A           26 VTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILV  104 (273)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEE
T ss_pred             EECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence            7999999999999999999 5688899999888776655543         289999999999999999999 8999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..++.                     
T Consensus       105 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------------  163 (273)
T 1ae1_A          105 NNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS---------------------  163 (273)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS---------------------
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC---------------------
Confidence            9999987777888899999999999999999999999999863  48999999998843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||++++.|+++++.++++.    ||+||+|+||++.|++...
T Consensus       164 -------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  211 (273)
T 1ae1_A          164 -------------------ALPSVSLYSASKGAINQMTKSLACEWAKD----NIRVNSVAPGVILTPLVET  211 (273)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBC------
T ss_pred             -------------------CCCCcchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeCCCcCchhhh
Confidence                               34456899999999999999999999987    7999999999999998654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-33  Score=231.67  Aligned_cols=173  Identities=28%  Similarity=0.423  Sum_probs=153.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++++.|+++ +..|++++|+.++++...+++          ..+|++|+++++++++++.+.++++|+||
T Consensus        26 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv  104 (267)
T 1vl8_A           26 VTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVV  104 (267)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 568888999988877666554          12899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCC-ccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSC-GHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~-~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||||.....++.+.+.+.|++++++|+.|+++++++++|.|++  .++||++||.. +..                    
T Consensus       105 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--------------------  164 (267)
T 1vl8_A          105 NAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV--------------------  164 (267)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC--------------------
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc--------------------
Confidence            9999977677778899999999999999999999999999965  37999999987 632                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|+|.+
T Consensus       165 --------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~  211 (267)
T 1vl8_A          165 --------------------TMPNISAYAASKGGVASLTKALAKEWGRY----GIRVNVIAPGWYRTKMTE  211 (267)
T ss_dssp             --------------------CSSSCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSTTTH
T ss_pred             --------------------CCCCChhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeccCcccccc
Confidence                                34456899999999999999999999987    788999999999999864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.4e-33  Score=230.44  Aligned_cols=177  Identities=25%  Similarity=0.304  Sum_probs=155.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcC------C
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHG------G   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~------~   65 (230)
                      ||||++|||++++++|+++|...+++.+|+.+.++....++..         +|++|.++++.+++++.+.++      +
T Consensus        12 ITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (255)
T 3icc_A           12 VTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTK   91 (255)
T ss_dssp             ETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSC
T ss_pred             EECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccccCCc
Confidence            7999999999999999999654445567888877777666542         899999999999999988764      4


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      +|+||||||......+.+.+.+.|++++++|+.|++.++++++|.|++.++||++||..+..                  
T Consensus        92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~------------------  153 (255)
T 3icc_A           92 FDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI------------------  153 (255)
T ss_dssp             EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS------------------
T ss_pred             ccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc------------------
Confidence            99999999998777778889999999999999999999999999998889999999998844                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                            +.++...|++||+++++|+++++.++.+.    ||+||+|+||+++|+|.+...
T Consensus       154 ----------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~  203 (255)
T 3icc_A          154 ----------------------SLPDFIAYSMTKGAINTMTFTLAKQLGAR----GITVNAILPGFVKTDMNAELL  203 (255)
T ss_dssp             ----------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCCSSSTTTT
T ss_pred             ----------------------CCCCcchhHHhHHHHHHHHHHHHHHHHhc----CeEEEEEEEeeecccchhhhc
Confidence                                  44566899999999999999999999987    788999999999999987653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=3.5e-33  Score=229.43  Aligned_cols=173  Identities=23%  Similarity=0.282  Sum_probs=147.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||++|||++++++|+++ +..|++++|++ +++++..+..      ..+|++|+++++++++++.+.++++|+|||||
T Consensus        12 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA   90 (249)
T 2ew8_A           12 ITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNA   90 (249)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            7999999999999999999 56788889987 6665533322      23899999999999999999999999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |.....++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                        
T Consensus        91 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------------  146 (249)
T 2ew8_A           91 GIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL------------------------  146 (249)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS------------------------
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc------------------------
Confidence            9877677778899999999999999999999999999864  48999999988843                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                      +.++...|++||++++.|+++++.++++.    ||+||+|+||++.|++..
T Consensus       147 ----------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          147 ----------------KIEAYTHYISTKAANIGFTRALASDLGKD----GITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             ----------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCC------
T ss_pred             ----------------CCCCchhHHHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCcCcCccch
Confidence                            34456899999999999999999999987    799999999999999865

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-33  Score=231.20  Aligned_cols=172  Identities=24%  Similarity=0.330  Sum_probs=153.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus         7 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~   85 (256)
T 1geg_A            7 VTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVN   85 (256)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 5688889999887776655542         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.....++.+.+.+.|++++++|+.|++.++++++|.|++   .++||++||..+..                     
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  144 (256)
T 1geg_A           86 NAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV---------------------  144 (256)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS---------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC---------------------
Confidence            999877677778899999999999999999999999999864   57999999988843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                         +.++...|++||+++++|+++++.++.+.    ||+||+|+||++.|++.
T Consensus       145 -------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~  190 (256)
T 1geg_A          145 -------------------GNPELAVYSSSKFAVRGLTQTAARDLAPL----GITVNGYCPGIVKTPMW  190 (256)
T ss_dssp             -------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSHHH
T ss_pred             -------------------CCCCchhHHHHHHHHHHHHHHHHHHHHHc----CeEEEEEEECCCccchh
Confidence                               34456899999999999999999999987    79999999999999874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=5.1e-33  Score=230.26  Aligned_cols=175  Identities=21%  Similarity=0.260  Sum_probs=153.0

Q ss_pred             CCCCC-CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGAN-KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s-~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+ +|||++++++|+++ +..|++++|+.++++...+++.+          +|++|+++++++++++.+.+++||+|
T Consensus        27 ITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l  105 (266)
T 3o38_A           27 VTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVL  105 (266)
T ss_dssp             ESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEE
Confidence            79998 59999999999999 56799999999888877766632          89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||||.....++.+.+.++|++++++|+.|++.++++++|.|++   .++||++||..+..                   
T Consensus       106 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------------  166 (266)
T 3o38_A          106 VNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-------------------  166 (266)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-------------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-------------------
Confidence            99999987777888899999999999999999999999999864   47999999988843                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                           +.++...|++||+++++|+++++.++...    ||+||+|+||+++|++.+..
T Consensus       167 ---------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  215 (266)
T 3o38_A          167 ---------------------AQHSQSHYAAAKAGVMALTRCSAIEAVEF----GVRINAVSPSIARHKFLEKT  215 (266)
T ss_dssp             ---------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCC------
T ss_pred             ---------------------CCCCCchHHHHHHHHHHHHHHHHHHHHHc----CcEEEEEeCCcccchhhhcc
Confidence                                 44566899999999999999999999987    79999999999999987643

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=3.6e-33  Score=231.78  Aligned_cols=175  Identities=26%  Similarity=0.331  Sum_probs=152.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEe-cCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~-r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++| ..|++.+ ++.+.++.....+.         .+|++|+++++++++++.+.++++|+||
T Consensus        30 ITGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li  108 (269)
T 3gk3_A           30 VTGGMGGLGAAISRRLHDAG-MAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLI  108 (269)
T ss_dssp             ETTTTSHHHHHHHHHHHTTT-CEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred             EECCCchHHHHHHHHHHHCC-CEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999999999999999995 4666666 56655555544432         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|++.++++++|.|+  +.++||++||..+..                     
T Consensus       109 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  167 (269)
T 3gk3_A          109 NNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR---------------------  167 (269)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------------------
T ss_pred             ECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc---------------------
Confidence            999998888888899999999999999999999999999885  458999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.++...|++||+++++|+++++.++...    ||+||+|+||+++|++.+..
T Consensus       168 -------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~  216 (269)
T 3gk3_A          168 -------------------GAFGQANYASAKAGIHGFTKTLALETAKR----GITVNTVSPGYLATAMVEAV  216 (269)
T ss_dssp             -------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTTC-
T ss_pred             -------------------CCCCcchHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEecCcccchhhhhh
Confidence                               44566899999999999999999999987    78999999999999997654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.9e-33  Score=235.16  Aligned_cols=172  Identities=23%  Similarity=0.280  Sum_probs=149.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchh-HHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRG-QEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~-~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.. +...+.+.         .+|++|+++++++++++.+.++++|+||
T Consensus        52 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  130 (291)
T 3ijr_A           52 ITGGDSGIGRAVSIAFAKE-GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILV  130 (291)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 56788888876643 33333222         2899999999999999999999999999


Q ss_pred             EccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          71 NNAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        71 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||||.... .++.+.+.++|++++++|+.|+++++++++|.|++.++||++||..++.                      
T Consensus       131 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------------------  188 (291)
T 3ijr_A          131 NNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE----------------------  188 (291)
T ss_dssp             ECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH----------------------
T ss_pred             ECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC----------------------
Confidence            99998643 4567788999999999999999999999999999889999999988843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                        +.++...|++||+++++|+++++.|+++.    ||+||+|+||++.|++.
T Consensus       189 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~  234 (291)
T 3ijr_A          189 ------------------GNETLIDYSATKGAIVAFTRSLSQSLVQK----GIRVNGVAPGPIWTPLI  234 (291)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSTHH
T ss_pred             ------------------CCCCChhHHHHHHHHHHHHHHHHHHHhhc----CEEEEEEeeCCCcCCcc
Confidence                              34456899999999999999999999987    78899999999999974

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=2.1e-33  Score=231.81  Aligned_cols=173  Identities=28%  Similarity=0.305  Sum_probs=152.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch--hHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR--GQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~--~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|+.++  ++...+++.         .+|++|+++++++++++.+.++++|+|
T Consensus         7 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (258)
T 3a28_C            7 VTGGAQGIGRGISEKLAAD-GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVL   85 (258)
T ss_dssp             EETTTSHHHHHHHHHHHHH-TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            7999999999999999999 5678888998877  666655543         289999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CC-ceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~-g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||||.....++.+.+.++|++++++|+.|++.++++++|.|+  .. ++||++||..+..                   
T Consensus        86 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------------  146 (258)
T 3a28_C           86 VNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ-------------------  146 (258)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS-------------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc-------------------
Confidence            9999997767777889999999999999999999999999985  34 8999999988843                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|+|..
T Consensus       147 ---------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~  193 (258)
T 3a28_C          147 ---------------------GFPILSAYSTTKFAVRGLTQAAAQELAPK----GHTVNAYAPGIVGTGMWE  193 (258)
T ss_dssp             ---------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSHHHH
T ss_pred             ---------------------CCCCchhHHHHHHHHHHHHHHHHHHHHhh----CeEEEEEECCccCChhhh
Confidence                                 34456899999999999999999999987    788999999999999743

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-33  Score=233.28  Aligned_cols=183  Identities=22%  Similarity=0.278  Sum_probs=149.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC------------cchhHHHHHhhh---------cccCCCHHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD------------ASRGQEALEKLQ---------KLDILDKNSIKALHDHL   59 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~------------~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~   59 (230)
                      ||||++|||++++++|+++ +..|++++|+            .+.++.....+.         .+|++|+++++++++++
T Consensus        15 VTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   93 (287)
T 3pxx_A           15 VTGGARGQGRSHAVKLAEE-GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANA   93 (287)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             EeCCCChHHHHHHHHHHHC-CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            7999999999999999999 5678888876            444444444332         28999999999999999


Q ss_pred             HhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHh
Q psy7994          60 EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKL  139 (230)
Q Consensus        60 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~  139 (230)
                      .+.++++|+||||||.....  .+.+.+.|++++++|+.|+++++++++|.|++.++||++||..+.......+.     
T Consensus        94 ~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-----  166 (287)
T 3pxx_A           94 VAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG-----  166 (287)
T ss_dssp             HHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC------
T ss_pred             HHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc-----
Confidence            99999999999999987544  33788999999999999999999999999988899999999887542211000     


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         140 LHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                              ....+.++...|++||+++++|+++++.++++.    ||+||+|+||+++|+|.+.
T Consensus       167 ------------------------~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~  218 (287)
T 3pxx_A          167 ------------------------AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQ----SIRANVIHPTNVNTDMLNS  218 (287)
T ss_dssp             ----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEESSBSSTTTSS
T ss_pred             ------------------------ccccCCCccchHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCccccccccc
Confidence                                    000111234789999999999999999999987    7889999999999999763

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.3e-33  Score=232.86  Aligned_cols=173  Identities=25%  Similarity=0.259  Sum_probs=145.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC------------cchhHHHHHhhh---------cccCCCHHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD------------ASRGQEALEKLQ---------KLDILDKNSIKALHDHL   59 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~------------~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~   59 (230)
                      ||||++|||++++++|+++ +..|++++|+            .+.++...+.+.         .+|++|+++++++++++
T Consensus        18 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   96 (278)
T 3sx2_A           18 ITGAARGQGRAHAVRLAAD-GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAG   96 (278)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             EECCCChHHHHHHHHHHHC-CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            7999999999999999999 5678888876            445555444432         28999999999999999


Q ss_pred             HhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHH
Q psy7994          60 EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALK  136 (230)
Q Consensus        60 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~  136 (230)
                      .+.++++|+||||||.....    .+.++|++++++|+.|+++++++++|.|++   .++||++||..+......     
T Consensus        97 ~~~~g~id~lv~nAg~~~~~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  167 (278)
T 3sx2_A           97 LDELGRLDIVVANAGIAPMS----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS-----  167 (278)
T ss_dssp             HHHHCCCCEEEECCCCCCCS----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC-----
T ss_pred             HHHcCCCCEEEECCCCCCCC----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc-----
Confidence            99999999999999986432    257899999999999999999999999853   589999999988542100     


Q ss_pred             HHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         137 KKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                                     +.++...|++||+++++|+++++.++++.    ||+||+|+||+|+|+|
T Consensus       168 -------------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~  212 (278)
T 3sx2_A          168 -------------------------------ADPGSVGYVAAKHGVVGLMRVYANLLAGQ----MIRVNSIHPSGVETPM  212 (278)
T ss_dssp             -------------------------------SSHHHHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCBSSTT
T ss_pred             -------------------------------CCCCchHhHHHHHHHHHHHHHHHHHHhcc----CcEEEEEecCCccCcc
Confidence                                           11234789999999999999999999987    7999999999999999


Q ss_pred             CC
Q psy7994         217 SS  218 (230)
Q Consensus       217 ~~  218 (230)
                      ..
T Consensus       213 ~~  214 (278)
T 3sx2_A          213 IN  214 (278)
T ss_dssp             TS
T ss_pred             ch
Confidence            75

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=6.5e-33  Score=232.94  Aligned_cols=171  Identities=20%  Similarity=0.171  Sum_probs=151.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEe-cCcchhHHHHHhhh----------cccCCCHH-----------------HH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKLQ----------KLDILDKN-----------------SI   52 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~-r~~~~~~~~~~~~~----------~~D~s~~~-----------------~v   52 (230)
                      ||||++|||+++++.|+++ +..|++++ |+.+.++...+++.          .+|+++++                 ++
T Consensus        14 VTGas~GIG~aia~~la~~-G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v   92 (291)
T 1e7w_A           14 VTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRC   92 (291)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHH
T ss_pred             EECCCchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHHH
Confidence            7999999999999999999 55788888 99888877766553          28999999                 99


Q ss_pred             HHHHHHHHhhcCCCcEEEEccCCccccCCCCCC--------------hhHHHHHHHHhhhhHHHHHHHhcccccC-----
Q psy7994          53 KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPF--------------GSQALHTMRTNYFALIDVCDILFPLLRS-----  113 (230)
Q Consensus        53 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----  113 (230)
                      +++++++.+.++++|+||||||.....++.+.+              .+.|++++++|+.|++.++++++|.|++     
T Consensus        93 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~  172 (291)
T 1e7w_A           93 AELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKH  172 (291)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGG
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Confidence            999999999999999999999998777777778              8999999999999999999999999853     


Q ss_pred             ---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHH
Q psy7994         114 ---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQH  190 (230)
Q Consensus       114 ---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la  190 (230)
                         .++||++||..+..                                        +.++...|++||+++.+|+++++
T Consensus       173 ~~~~g~Iv~isS~~~~~----------------------------------------~~~~~~~Y~asKaa~~~l~~~la  212 (291)
T 1e7w_A          173 RGTNYSIINMVDAMTNQ----------------------------------------PLLGYTIYTMAKGALEGLTRSAA  212 (291)
T ss_dssp             SCSCEEEEEECCTTTTS----------------------------------------CCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEEechhhcC----------------------------------------CCCCCchhHHHHHHHHHHHHHHH
Confidence               47999999998844                                        44566899999999999999999


Q ss_pred             HhhhhhhccCCeEEEEecCCccccCC
Q psy7994         191 ALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       191 ~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                      .++++.    ||+||+|+||+++|+|
T Consensus       213 ~e~~~~----gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          213 LELAPL----QIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             HHHGGG----TEEEEEEEESSBCCGG
T ss_pred             HHHHhc----CeEEEEEeeCCccCCc
Confidence            999987    7999999999999998

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.8e-32  Score=226.73  Aligned_cols=228  Identities=48%  Similarity=0.714  Sum_probs=173.3

Q ss_pred             CCCCCCcHHHHHHHHHHH-hcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQ-QFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~-~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|++ + +..|++++|+.++++...+++.         .+|++|+++++++++++.+.++++|+||
T Consensus         9 ITGasggIG~~~a~~L~~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   87 (276)
T 1wma_A            9 VTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLV   87 (276)
T ss_dssp             ESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHhc-CCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            799999999999999999 7 5688999999887776655542         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcccc-ccchHHHHHHhhhhchhHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLC-HVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~-~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||||............+.+++++++|+.|++.++++++|.|++.++||++||..+... +...+....+......+.+.+
T Consensus        88 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~  167 (276)
T 1wma_A           88 NNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEEL  167 (276)
T ss_dssp             ECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHH
T ss_pred             ECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhhh
Confidence            9999865433222225889999999999999999999999987899999999877542 111122222222223333344


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCCCCccccC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDN  229 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~a  229 (230)
                      ..+...+..............+...|++||++++.+++.++.++.......||+|++|+||++.|+|.+.....+++++|
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~a  247 (276)
T 1wma_A          168 VGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGA  247 (276)
T ss_dssp             HHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCSBCHHHHT
T ss_pred             hhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCccccCChhHhh
Confidence            44455555444444444444555899999999999999999999873211279999999999999998776667777765

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=3.6e-33  Score=237.66  Aligned_cols=174  Identities=23%  Similarity=0.320  Sum_probs=153.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC----------cchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHh
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD----------ASRGQEALEKLQK---------LDILDKNSIKALHDHLEA   61 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~----------~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~   61 (230)
                      ||||++|||++++++|+++ +..|++++|+          .+.++...+++..         +|++|+++++++++++.+
T Consensus        32 VTGas~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  110 (322)
T 3qlj_A           32 VTGAGGGIGRAHALAFAAE-GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVE  110 (322)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            7999999999999999999 5688888887          5666666655532         899999999999999999


Q ss_pred             hcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCccccccchH
Q psy7994          62 EHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGHLCHVTSE  133 (230)
Q Consensus        62 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~~~~~~~~  133 (230)
                      .+++||+||||||.....++.+.+.++|++++++|+.|++.++++++|.|++        .|+||++||..+..      
T Consensus       111 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------  184 (322)
T 3qlj_A          111 TFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ------  184 (322)
T ss_dssp             HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc------
Confidence            9999999999999988777888999999999999999999999999998853        27999999988743      


Q ss_pred             HHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc
Q psy7994         134 ALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN  213 (230)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~  213 (230)
                                                        +.++...|++||+|+++|+++++.|+++.    ||+||+|+|| +.
T Consensus       185 ----------------------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~----gI~vn~v~PG-~~  225 (322)
T 3qlj_A          185 ----------------------------------GSVGQGNYSAAKAGIATLTLVGAAEMGRY----GVTVNAIAPS-AR  225 (322)
T ss_dssp             ----------------------------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC-TT
T ss_pred             ----------------------------------CCCCCccHHHHHHHHHHHHHHHHHHhccc----CcEEEEecCC-CC
Confidence                                              34456899999999999999999999988    7999999999 99


Q ss_pred             cCCCCCC
Q psy7994         214 TDMSSGK  220 (230)
Q Consensus       214 t~~~~~~  220 (230)
                      |+|....
T Consensus       226 t~~~~~~  232 (322)
T 3qlj_A          226 TRMTETV  232 (322)
T ss_dssp             SCCSCCS
T ss_pred             Cccchhh
Confidence            9987654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=5.1e-33  Score=236.57  Aligned_cols=174  Identities=26%  Similarity=0.361  Sum_probs=152.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+.+.           .+|++|+++++++++++.+.++++|+|
T Consensus        13 VTGas~gIG~~la~~l~~~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   91 (319)
T 3ioy_A           13 VTGGANGVGIGLVRQLLNQ-GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSIL   91 (319)
T ss_dssp             EETTTSTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEE
T ss_pred             EcCCchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            7999999999999999999 5689999999988887766543           289999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCccccccchHHHHHHhhh
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGHLCHVTSEALKKKLLH  141 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~~~~~~~~~~~~~~~~  141 (230)
                      |||||+....++.+.+.+.|++++++|+.|++.++++++|.|++        .|+||++||.++..              
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~--------------  157 (319)
T 3ioy_A           92 CNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL--------------  157 (319)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC--------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc--------------
Confidence            99999987778888899999999999999999999999998853        58999999999854              


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         142 EIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                                +.++...|++||+|+++|+++++.++...    ||+|++|+||+|+|++...
T Consensus       158 --------------------------~~~~~~~Y~aSKaal~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~  205 (319)
T 3ioy_A          158 --------------------------AAGSPGIYNTTKFAVRGLSESLHYSLLKY----EIGVSVLCPGLVKSYIYAS  205 (319)
T ss_dssp             --------------------------CCSSSHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEECCCCBC------
T ss_pred             --------------------------CCCCCHHHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEEcCeEccCcccc
Confidence                                      34456899999999999999999999987    7889999999999998754

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.1e-33  Score=231.08  Aligned_cols=173  Identities=27%  Similarity=0.394  Sum_probs=153.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||++++++|+++ +..|++++|+++++++..+++.        .+|++|+++++++++++.+.++++|+||||
T Consensus        34 VTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn  112 (276)
T 2b4q_A           34 VTGGSRGIGQMIAQGLLEA-GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNN  112 (276)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEEC
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999 5688899999888777666543        289999999999999999999999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--C----ceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--H----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~----g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||.....++.+.+.++|++++++|+.|++.++++++|.|++  .    ++||++||..+..                   
T Consensus       113 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~-------------------  173 (276)
T 2b4q_A          113 AGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS-------------------  173 (276)
T ss_dssp             CCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC-------------------
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC-------------------
Confidence            99987777888899999999999999999999999999853  3    8999999988743                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCc-hhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNS-AYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           +.++.. .|++||++++.|+++++.|+.+.    ||+||+|+||+++|++..
T Consensus       174 ---------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gI~vn~v~PG~v~T~~~~  221 (276)
T 2b4q_A          174 ---------------------AMGEQAYAYGPSKAALHQLSRMLAKELVGE----HINVNVIAPGRFPSRMTR  221 (276)
T ss_dssp             ---------------------CCCCSCTTHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCSTTTH
T ss_pred             ---------------------CCCCCccccHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeccCcCcchh
Confidence                                 333446 89999999999999999999987    789999999999999864

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-32  Score=228.07  Aligned_cols=175  Identities=17%  Similarity=0.171  Sum_probs=146.6

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---Hhh-----hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---EKL-----QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~~~-----~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+  +|||++++++|+++ +..|++++|+....+...   +..     ..+|++|+++++++++++.+.+++||+||
T Consensus        19 ITGa~~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv   97 (271)
T 3ek2_A           19 LTGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLDGLV   97 (271)
T ss_dssp             ECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEE
T ss_pred             EeCCCCCCcHHHHHHHHHHHc-CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79998  99999999999999 558888888754332222   221     13899999999999999999999999999


Q ss_pred             EccCCccc----cCCCC-CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          71 NNAAIAFK----VNSSE-PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        71 ~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||....    .++.+ .+.+.|++++++|+.|++.++++++|.|++.++||++||..+..                  
T Consensus        98 ~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------------------  159 (271)
T 3ek2_A           98 HSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER------------------  159 (271)
T ss_dssp             ECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------------
T ss_pred             ECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc------------------
Confidence            99998764    55565 88999999999999999999999999999889999999988844                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                            +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|+|.+..
T Consensus       160 ----------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~  208 (271)
T 3ek2_A          160 ----------------------AIPNYNTMGLAKAALEASVRYLAVSLGAK----GVRVNAISAGPIKTLAASGI  208 (271)
T ss_dssp             ----------------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCC-----CCC
T ss_pred             ----------------------CCCCccchhHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCcccchhhhcc
Confidence                                  44566899999999999999999999987    78899999999999997653

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1e-32  Score=230.10  Aligned_cols=174  Identities=29%  Similarity=0.311  Sum_probs=157.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+.+.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        10 VTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag   88 (281)
T 3m1a_A           10 VTGASSGFGRAIAEAAVAA-GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAG   88 (281)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            7999999999999999999 5688999999988887766543      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                         
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------------------  143 (281)
T 3m1a_A           89 RTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-------------------------  143 (281)
T ss_dssp             CEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-------------------------
T ss_pred             cCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-------------------------
Confidence            988788888999999999999999999999999999964  48999999988844                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     +.++...|++||+++++++++++.++++.    ||+||+|+||++.|++...
T Consensus       144 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  191 (281)
T 3m1a_A          144 ---------------SFAGFSAYSATKAALEQLSEGLADEVAPF----GIKVLIVEPGAFRTNLFGK  191 (281)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTTCC
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCccccccccc
Confidence                           45566899999999999999999999987    7899999999999999664

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-33  Score=232.40  Aligned_cols=173  Identities=22%  Similarity=0.249  Sum_probs=152.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.           .+|++|+++++++++++.+.++++|+|
T Consensus        18 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   96 (267)
T 1iy8_A           18 ITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGF   96 (267)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7999999999999999999 5688889999887776654432           289999999999999999999999999


Q ss_pred             EEccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          70 VNNAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||||.... .++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                   
T Consensus        97 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------------  157 (267)
T 1iy8_A           97 FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-------------------  157 (267)
T ss_dssp             EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-------------------
T ss_pred             EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc-------------------
Confidence            999998765 66777889999999999999999999999999863  48999999998843                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           +.++...|++||+++++|+++++.++++.    ||+||+|+||++.|++..
T Consensus       158 ---------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~  204 (267)
T 1iy8_A          158 ---------------------GIGNQSGYAAAKHGVVGLTRNSAVEYGRY----GIRINAIAPGAIWTPMVE  204 (267)
T ss_dssp             ---------------------BCSSBHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSHHHH
T ss_pred             ---------------------CCCCCccHHHHHHHHHHHHHHHHHHHHhc----CeEEEEEEeCCCcCcchh
Confidence                                 34456899999999999999999999987    788999999999998743

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.3e-32  Score=227.86  Aligned_cols=176  Identities=16%  Similarity=0.190  Sum_probs=152.6

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+  +|||++++++|+++ +..|++++|+....+...+...          .+|++|+++++++++++.+.++++|+
T Consensus        12 VTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   90 (266)
T 3oig_A           12 VMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHG   90 (266)
T ss_dssp             EECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCCCE
T ss_pred             EEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCeeE
Confidence            79999  67999999999999 5578888888654433322211          28999999999999999999999999


Q ss_pred             EEEccCCcc----ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          69 LVNNAAIAF----KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        69 lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      ||||||...    ..++.+.+.+.|++++++|+.+++.++++++|.|+++++||++||..+..                 
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------------  153 (266)
T 3oig_A           91 IAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL-----------------  153 (266)
T ss_dssp             EEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------------
T ss_pred             EEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc-----------------
Confidence            999999875    35667788999999999999999999999999999889999999998844                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                             +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.....
T Consensus       154 -----------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~~  203 (266)
T 3oig_A          154 -----------------------VMPNYNVMGVAKASLDASVKYLAADLGKE----NIRVNSISAGPIRTLSAKGIS  203 (266)
T ss_dssp             -----------------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCSGGGTTCT
T ss_pred             -----------------------cCCCcchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCccccccccccc
Confidence                                   45566899999999999999999999987    799999999999999876543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-33  Score=231.27  Aligned_cols=173  Identities=21%  Similarity=0.250  Sum_probs=153.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        12 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   90 (262)
T 1zem_A           12 VTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFN   90 (262)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 5678889999888777665543         28999999999999999999999999999


Q ss_pred             ccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.. ...++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                     
T Consensus        91 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  149 (262)
T 1zem_A           91 NAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK---------------------  149 (262)
T ss_dssp             CCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS---------------------
T ss_pred             CCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc---------------------
Confidence            99987 5667778899999999999999999999999999864  48999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|++||++++.|+++++.++++.    ||+||+|+||+++|+|..
T Consensus       150 -------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~  196 (262)
T 1zem_A          150 -------------------GPPNMAAYGTSKGAIIALTETAALDLAPY----NIRVNAISPGYMGPGFMW  196 (262)
T ss_dssp             -------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSHHH
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHHHhh----CeEEEEEecCCcCcchhh
Confidence                               34456899999999999999999999987    799999999999999743

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=5.4e-33  Score=226.03  Aligned_cols=175  Identities=22%  Similarity=0.276  Sum_probs=153.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.          .+|++|+++++++++++.+.++++|+||
T Consensus         7 ITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li   85 (235)
T 3l77_A            7 ITGASRGIGEAIARALARD-GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVV   85 (235)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999999 5679999999988887776654          2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||||.....++.+.+.++|++++++|+.|++.++++++|.|++ .+++|+++|..+..                      
T Consensus        86 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----------------------  143 (235)
T 3l77_A           86 ANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSAR----------------------  143 (235)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS----------------------
T ss_pred             ECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcc----------------------
Confidence            9999988888889999999999999999999999999999854 58999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP  222 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~  222 (230)
                                        +.++...|++||+++++|+++++  +...    ||+||+|+||+++|+|.+....
T Consensus       144 ------------------~~~~~~~Y~~sKaa~~~~~~~l~--~~~~----~i~v~~v~PG~v~T~~~~~~~~  192 (235)
T 3l77_A          144 ------------------LIPYGGGYVSTKWAARALVRTFQ--IENP----DVRFFELRPGAVDTYFGGSKPG  192 (235)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHH--HHCT----TSEEEEEEECSBSSSTTTCCSC
T ss_pred             ------------------cCCCcchHHHHHHHHHHHHHHHh--hcCC----CeEEEEEeCCccccccccccCC
Confidence                              34455899999999999999993  3333    7999999999999999876543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=9.7e-33  Score=228.28  Aligned_cols=173  Identities=25%  Similarity=0.335  Sum_probs=154.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        12 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag   90 (260)
T 1nff_A           12 VSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAG   90 (260)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5688889999888777665543      38999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..++.                         
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------------------  145 (260)
T 1nff_A           91 ILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA-------------------------  145 (260)
T ss_dssp             CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------------------
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC-------------------------
Confidence            987777888899999999999999999999999999864  58999999988843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                     +.++...|++||++++.++++++.++++.    ||+||+|+||++.|++..
T Consensus       146 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          146 ---------------GTVACHGYTATKFAVRGLTKSTALELGPS----GIRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSGGGT
T ss_pred             ---------------CCCCchhHHHHHHHHHHHHHHHHHHhCcc----CcEEEEEEeCCCCCCccc
Confidence                           34456899999999999999999999987    799999999999999854

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=5e-33  Score=229.18  Aligned_cols=172  Identities=27%  Similarity=0.363  Sum_probs=153.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        10 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg   88 (254)
T 1hdc_A           10 ITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAG   88 (254)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5688889999888777665542      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..                         
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------------------  143 (254)
T 1hdc_A           89 ISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM-------------------------  143 (254)
T ss_dssp             CCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------------------
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-------------------------
Confidence            877667778889999999999999999999999999964  48999999988843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                     +.++...|++||++++.|+++++.++.+.    ||+||+|+||++.|++.
T Consensus       144 ---------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~  189 (254)
T 1hdc_A          144 ---------------GLALTSSYGASKWGVRGLSKLAAVELGTD----RIRVNSVHPGMTYTPMT  189 (254)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHH
T ss_pred             ---------------CCCCchhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecccCcCccc
Confidence                           34456899999999999999999999887    79999999999999874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.4e-33  Score=234.14  Aligned_cols=170  Identities=25%  Similarity=0.296  Sum_probs=152.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.++..  ....+|++|.++++++++++.+.++++|+||||||.....+
T Consensus        33 VTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~--~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~  109 (266)
T 3uxy_A           33 VTGAAGGIGGAVVTALRAA-GARVAVADRAVAGIAAD--LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGR  109 (266)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEECSSCCTTSCCS--EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHhh--hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            7999999999999999999 56888899987655433  11248999999999999999999999999999999988888


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..                               
T Consensus       110 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-------------------------------  158 (266)
T 3uxy_A          110 ITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR-------------------------------  158 (266)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB-------------------------------
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-------------------------------
Confidence            888999999999999999999999999999964  58999999998844                               


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                               +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.
T Consensus       159 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~  204 (266)
T 3uxy_A          159 ---------PGPGHALYCLTKAALASLTQCMGMDHAPQ----GIRINAVCPNEVNTPML  204 (266)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCCHHH
T ss_pred             ---------CCCCChHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeeCCCcchHh
Confidence                     45566899999999999999999999988    79999999999999974

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=8e-33  Score=226.48  Aligned_cols=173  Identities=24%  Similarity=0.335  Sum_probs=152.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccC--CCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDI--LDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~--s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..          +|+  +++++++++++++.+.++++|+
T Consensus        19 ITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~   97 (247)
T 3i1j_A           19 VTGAARGIGAAAARAYAAH-GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDG   97 (247)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999 56899999999888877666532          455  9999999999999999999999


Q ss_pred             EEEccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          69 LVNNAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        69 lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||||.. ...++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                  
T Consensus        98 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------  159 (247)
T 3i1j_A           98 LLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK------------------  159 (247)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS------------------
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC------------------
Confidence            99999985 3456778899999999999999999999999999965  37999999988843                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhh-hhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQ-DAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~-~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                            +.++...|++||+++++|+++++.++.. .    ||+||+|+||+++|+|..
T Consensus       160 ----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~----~i~v~~v~PG~v~t~~~~  207 (247)
T 3i1j_A          160 ----------------------GRANWGAYGVSKFATEGLMQTLADELEGVT----AVRANSINPGATRTGMRA  207 (247)
T ss_dssp             ----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTS----SEEEEEEECCCCSSHHHH
T ss_pred             ----------------------CCCCcchhHHHHHHHHHHHHHHHHHhcCCC----CeEEEEEecCcccCccch
Confidence                                  4456689999999999999999999975 4    799999999999998753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.1e-32  Score=228.02  Aligned_cols=171  Identities=19%  Similarity=0.216  Sum_probs=146.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++.+.....    ..+|++|+++++++++++.+.++++|+||||||..
T Consensus        32 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~  110 (260)
T 3gem_A           32 ITGASQRVGLHCALRLLEH-GHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEW  110 (260)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcc
Confidence            7999999999999999999 557888999887765444332    23899999999999999999999999999999987


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      .... .+.+.++|++++++|+.|+++++++++|.|+++  ++||++||..+..                           
T Consensus       111 ~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------------------  162 (260)
T 3gem_A          111 LAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK---------------------------  162 (260)
T ss_dssp             CCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT---------------------------
T ss_pred             CCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC---------------------------
Confidence            5544 566778999999999999999999999999754  8999999988843                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                   +.++...|++||+++++|+++++.++++.     |+||+|+||++.|++..
T Consensus       163 -------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~-----Irvn~v~PG~v~t~~~~  208 (260)
T 3gem_A          163 -------------GSSKHIAYCATKAGLESLTLSFAARFAPL-----VKVNGIAPALLMFQPKD  208 (260)
T ss_dssp             -------------CCSSCHHHHHHHHHHHHHHHHHHHHHTTT-----CEEEEEEECTTCC----
T ss_pred             -------------CCCCcHhHHHHHHHHHHHHHHHHHHHCCC-----CEEEEEeecccccCCCC
Confidence                         45566899999999999999999999873     88999999999998753

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=6.4e-33  Score=229.12  Aligned_cols=172  Identities=27%  Similarity=0.401  Sum_probs=153.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhc-CCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEH-GGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~-~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.         .+|++|+++++++++++.+.+ +++|+||
T Consensus        14 VTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv   92 (260)
T 2ae2_A           14 VTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILV   92 (260)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEE
Confidence            7999999999999999999 5688889999888777665542         289999999999999999999 8999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                     
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  151 (260)
T 2ae2_A           93 NNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL---------------------  151 (260)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS---------------------
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc---------------------
Confidence            9999876667778889999999999999999999999999864  48999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                         +.++...|++||++++.++++++.++++.    ||+||+|+||+++|++.
T Consensus       152 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~  197 (260)
T 2ae2_A          152 -------------------AVPYEAVYGATKGAMDQLTRCLAFEWAKD----NIRVNGVGPGVIATSLV  197 (260)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCSHHH
T ss_pred             -------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCCCCCcch
Confidence                               34456899999999999999999999987    78999999999999874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-33  Score=227.60  Aligned_cols=171  Identities=27%  Similarity=0.331  Sum_probs=152.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||++++++|+++ +..|++++|++++ ++..+++    ..+|++|+++++++++++.+.++++|+||||||..
T Consensus        11 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~   88 (256)
T 2d1y_A           11 VTGGARGIGRAIAQAFARE-GALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIA   88 (256)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            7999999999999999999 5688888998876 5554443    34899999999999999999999999999999998


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      ...++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                           
T Consensus        89 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------------------  141 (256)
T 2d1y_A           89 APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF---------------------------  141 (256)
T ss_dssp             CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS---------------------------
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC---------------------------
Confidence            7777888899999999999999999999999999864  38999999988843                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                   +.++...|++||++++.|+++++.++++.    ||+||+|+||+++|++.
T Consensus       142 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~  187 (256)
T 2d1y_A          142 -------------AEQENAAYNASKGGLVNLTRSLALDLAPL----RIRVNAVAPGAIATEAV  187 (256)
T ss_dssp             -------------BCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHH
T ss_pred             -------------CCCCChhHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEeeCCccCchh
Confidence                         34456899999999999999999999987    78999999999999874

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=4e-33  Score=228.41  Aligned_cols=172  Identities=19%  Similarity=0.144  Sum_probs=154.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-e--cCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-A--RDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~--r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||++|||++++++|+++ +..|+++ +  |++++++...+++...|+.|+++++++++++.+.++++|+||||||...
T Consensus         6 VTGas~gIG~~ia~~l~~~-G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~   84 (244)
T 1zmo_A            6 VTHARHFAGPAAVEALTQD-GYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTIVSNDYIPR   84 (244)
T ss_dssp             ESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGSSCEEEEEECCCCCT
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            7999999999999999999 5578888 6  9988888777666446778999999999999999999999999999887


Q ss_pred             c---cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          78 K---VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        78 ~---~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .   .++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                         
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-------------------------  139 (244)
T 1zmo_A           85 PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK-------------------------  139 (244)
T ss_dssp             TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-------------------------
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC-------------------------
Confidence            6   77888999999999999999999999999999964  48999999988843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                     +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|+|.
T Consensus       140 ---------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          140 ---------------PLAYNPLYGPARAATVALVESAAKTLSRD----GILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             ---------------CCTTCTTHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCBTTT
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEeeCCCcCCcc
Confidence                           44456899999999999999999999987    79999999999999997

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=6.9e-33  Score=231.69  Aligned_cols=173  Identities=24%  Similarity=0.252  Sum_probs=147.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+.+.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        10 VTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg   88 (281)
T 3zv4_A           10 ITGGASGLGRALVDRFVAE-GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAG   88 (281)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred             EECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            7999999999999999999 5688899999888877766543      28999999999999999999999999999999


Q ss_pred             CccccC-C----CCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          75 IAFKVN-S----SEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        75 ~~~~~~-~----~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ...... +    .+.+.+.|++++++|+.|+++++++++|.|+ ++++||++||..+..                     
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  147 (281)
T 3zv4_A           89 IWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY---------------------  147 (281)
T ss_dssp             CCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS---------------------
T ss_pred             cCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc---------------------
Confidence            864322 2    2344577999999999999999999999985 468999999998844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||+++++|+++++.|+++.     |+||+|+||+++|+|...
T Consensus       148 -------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~-----Irvn~v~PG~v~T~~~~~  194 (281)
T 3zv4_A          148 -------------------PNGGGPLYTATKHAVVGLVRQMAFELAPH-----VRVNGVAPGGMNTDLRGP  194 (281)
T ss_dssp             -------------------SSSSCHHHHHHHHHHHHHHHHHHHHHTTT-----SEEEEEEECSSCC--CCC
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHhcCC-----CEEEEEECCcCcCCcccc
Confidence                               44556899999999999999999999874     789999999999998754

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.1e-32  Score=229.30  Aligned_cols=171  Identities=22%  Similarity=0.196  Sum_probs=149.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHHhhh----------cccCCC----HHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEKLQ----------KLDILD----KNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~~~~----------~~D~s~----~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||++++++|+++ +..|++++|+. ++++...+++.          .+|++|    +++++++++++.+.+++
T Consensus        28 VTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~  106 (288)
T 2x9g_A           28 VTGAAKRIGRAIAVKLHQT-GYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGR  106 (288)
T ss_dssp             ETTCSSHHHHHHHHHHHHH-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999 56788889988 77776665553          289999    99999999999999999


Q ss_pred             CcEEEEccCCccccCC-----CC-----CChhHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCccc
Q psy7994          66 VDVLVNNAAIAFKVNS-----SE-----PFGSQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGHL  127 (230)
Q Consensus        66 id~lv~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~~  127 (230)
                      +|+||||||.....++     .+     .+.+.|++++++|+.|++.++++++|.|++        .++||++||..+..
T Consensus       107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  186 (288)
T 2x9g_A          107 CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQ  186 (288)
T ss_dssp             CCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTS
T ss_pred             CCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccC
Confidence            9999999998766665     55     778899999999999999999999999965        57999999998843


Q ss_pred             cccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEe
Q psy7994         128 CHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCV  207 (230)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v  207 (230)
                                                              +.++...|++||+++++|+++++.++++.    ||+||+|
T Consensus       187 ----------------------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v  222 (288)
T 2x9g_A          187 ----------------------------------------PCMAFSLYNMGKHALVGLTQSAALELAPY----GIRVNGV  222 (288)
T ss_dssp             ----------------------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEE
T ss_pred             ----------------------------------------CCCCCchHHHHHHHHHHHHHHHHHHhhcc----CeEEEEE
Confidence                                                    44556899999999999999999999987    7999999


Q ss_pred             cCCccccCC
Q psy7994         208 HPGYVNTDM  216 (230)
Q Consensus       208 ~pG~v~t~~  216 (230)
                      +||++.|++
T Consensus       223 ~PG~v~t~~  231 (288)
T 2x9g_A          223 APGVSLLPV  231 (288)
T ss_dssp             EESSCSCCT
T ss_pred             EeccccCcc
Confidence            999999998

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5e-33  Score=230.49  Aligned_cols=173  Identities=25%  Similarity=0.272  Sum_probs=151.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+++++++..+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        11 ITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg   89 (263)
T 2a4k_A           11 VTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAG   89 (263)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGG
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence            7999999999999999999 5688899999888887766553      28999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      .....++.+.+.++|++++++|+.|++.++++++|.|++.++||++||..++ ..                         
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~-------------------------  143 (263)
T 2a4k_A           90 VAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA-------------------------  143 (263)
T ss_dssp             GTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH-------------------------
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CC-------------------------
Confidence            9877778888999999999999999999999999999446899999999885 21                         


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     ++...|++||+++++++++++.++++.    ||+||+|+||++.|++...
T Consensus       144 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~  189 (263)
T 2a4k_A          144 ---------------FGLAHYAAGKLGVVGLARTLALELARK----GVRVNVLLPGLIQTPMTAG  189 (263)
T ss_dssp             ---------------HHHHHHHHCSSHHHHHHHHHHHHHTTT----TCEEEEEEECSBCCGGGTT
T ss_pred             ---------------CCcHHHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEEeCcCcCchhhh
Confidence                           123789999999999999999999987    7889999999999998654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.1e-33  Score=227.97  Aligned_cols=172  Identities=22%  Similarity=0.224  Sum_probs=146.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.      .+|++++++++++++++.+.   .|+||||||
T Consensus         6 VTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~lv~~Ag   81 (230)
T 3guy_A            6 ITGASSGLGAELAKLYDAE-GKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSI---PSTVVHSAG   81 (230)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSC---CSEEEECCC
T ss_pred             EecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhc---CCEEEEeCC
Confidence            7999999999999999999 4578999999998888777653      28999999999999877543   499999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      .....++.+.+.++|++++++|+.|++.++++++|.|+++ ++||++||..+..                          
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~--------------------------  135 (230)
T 3guy_A           82 SGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ--------------------------  135 (230)
T ss_dssp             CCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS--------------------------
T ss_pred             cCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC--------------------------
Confidence            9887888889999999999999999999999999998754 6999999988843                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                    +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.+..
T Consensus       136 --------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  184 (230)
T 3guy_A          136 --------------PKAQESTYCAVKWAVKGLIESVRLELKGK----PMKIIAVYPGGMATEFWETS  184 (230)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTS----SCEEEEEEECCC--------
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHHHhc----CeEEEEEECCcccChHHHhc
Confidence                          44566899999999999999999999987    78999999999999997654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=7.5e-33  Score=230.66  Aligned_cols=171  Identities=27%  Similarity=0.298  Sum_probs=147.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++| ..|++++|. +.+++..+++..         +|++|+++++++.+ ..+.++++|+|||
T Consensus        36 VTGas~GIG~aia~~la~~G-~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~~g~iD~lv~  112 (273)
T 3uf0_A           36 VTGAGSGIGRAIAHGYARAG-AHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAATRRVDVLVN  112 (273)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHHHSCCCEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHCC-CEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHhcCCCcEEEE
Confidence            79999999999999999995 567777765 444555444432         89999999999954 4556799999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.++|++++++|+.|+++++++++|.|+  ..|+||++||..+..                      
T Consensus       113 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----------------------  170 (273)
T 3uf0_A          113 NAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ----------------------  170 (273)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------------
T ss_pred             CCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC----------------------
Confidence            99998878888899999999999999999999999999985  348999999998843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|++||+++++|+++++.|+++.    ||+||+|+||++.|++..
T Consensus       171 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~  217 (273)
T 3uf0_A          171 ------------------GGRNVAAYAASKHAVVGLTRALASEWAGR----GVGVNALAPGYVVTANTA  217 (273)
T ss_dssp             ------------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGH
T ss_pred             ------------------CCCCChhHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeCCCcCCchh
Confidence                              45566899999999999999999999987    799999999999999864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.8e-33  Score=228.22  Aligned_cols=172  Identities=25%  Similarity=0.325  Sum_probs=136.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++..         +|++|+++++++++++.+.++++|+|||
T Consensus        14 ITGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   92 (253)
T 3qiv_A           14 VTGSGGGIGQAYAEALARE-GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVN   92 (253)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 56788999999888877766532         8999999999999999999999999999


Q ss_pred             ccCC---ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          72 NAAI---AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        72 ~ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||.   ....++.+.+.+.|++++++|+.|+++++++++|.|+  +.++||++||..++.                   
T Consensus        93 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------------  153 (253)
T 3qiv_A           93 NAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL-------------------  153 (253)
T ss_dssp             CCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------------
T ss_pred             CCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-------------------
Confidence            9998   3455677889999999999999999999999999985  358999999988732                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                              +...|++||+++++|+++++.++...    ||+||+|+||++.|++.+..
T Consensus       154 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  199 (253)
T 3qiv_A          154 ------------------------YSNYYGLAKVGINGLTQQLSRELGGR----NIRINAIAPGPIDTEANRTT  199 (253)
T ss_dssp             ------------------------------CCHHHHHHHHHHHHHHTTTT----TEEEEEEEC-----------
T ss_pred             ------------------------CCchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEecCCcccchhhc
Confidence                                    23689999999999999999999887    79999999999999987654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2e-33  Score=230.17  Aligned_cols=170  Identities=23%  Similarity=0.216  Sum_probs=149.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||||++|||++++++|+++++..|++.+|+++ ..+..  .+..+|++|+++++++++.+.  ++++|+||||||.....
T Consensus         9 ITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~--~~~~~Dv~~~~~v~~~~~~~~--~~~id~lv~nAg~~~~~   84 (244)
T 4e4y_A            9 VTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL--KFIKADLTKQQDITNVLDIIK--NVSFDGIFLNAGILIKG   84 (244)
T ss_dssp             EETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE--EEEECCTTCHHHHHHHHHHTT--TCCEEEEEECCCCCCCB
T ss_pred             EeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc--eEEecCcCCHHHHHHHHHHHH--hCCCCEEEECCccCCCC
Confidence            79999999999999999955788888888766 32211  233489999999999995553  78999999999998888


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL  159 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (230)
                      ++.+.+.++|++++++|+.|+++++++++|.|+++++||++||..+..                                
T Consensus        85 ~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------------------------------  132 (244)
T 4e4y_A           85 SIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI--------------------------------  132 (244)
T ss_dssp             CTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC--------------------------------
T ss_pred             CcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc--------------------------------
Confidence            889999999999999999999999999999998889999999998844                                


Q ss_pred             hhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         160 AQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                              +.++...|++||+++++|+++++.|+++.    ||+||+|+||+++|++.+
T Consensus       133 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~  179 (244)
T 4e4y_A          133 --------AKPNSFAYTLSKGAIAQMTKSLALDLAKY----QIRVNTVCPGTVDTDLYR  179 (244)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEESCBCCHHHH
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHHHHc----CeEEEEEecCccCchhhH
Confidence                    45566899999999999999999999987    788999999999999753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.3e-33  Score=232.69  Aligned_cols=173  Identities=25%  Similarity=0.298  Sum_probs=149.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.        .+|++|+++++++++++.+.++++|+||||
T Consensus        26 VTGas~gIG~aia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn  104 (272)
T 2nwq_A           26 ITGATSGFGEACARRFAEA-GWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINN  104 (272)
T ss_dssp             ESSTTTSSHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEEC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999999 5688889999888877666543        289999999999999999999999999999


Q ss_pred             cCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--Cc-eEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          73 AAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HG-RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        73 ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g-~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||.... .++.+.+.++|++++++|+.|++.++++++|.|++  .+ +||++||..+..                     
T Consensus       105 AG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~---------------------  163 (272)
T 2nwq_A          105 AGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW---------------------  163 (272)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS---------------------
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc---------------------
Confidence            998753 66778889999999999999999999999999864  47 999999988843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|+++|+++++|+++++.++++.    ||+||+|+||+++|+|..
T Consensus       164 -------------------~~~~~~~Y~asKaa~~~l~~~la~el~~~----gIrvn~v~PG~v~T~~~~  210 (272)
T 2nwq_A          164 -------------------PYPGSHVYGGTKAFVEQFSLNLRCDLQGT----GVRVTNLEPGLCESEFSL  210 (272)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHTTCTTS----CCEEEEEEECSBC-----
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEEcCCCcCcchh
Confidence                               34456899999999999999999999887    789999999999999864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=6.6e-33  Score=230.07  Aligned_cols=168  Identities=21%  Similarity=0.277  Sum_probs=148.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.+++..+++..           +|++++++++++++    .++++|+|
T Consensus        15 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~g~id~l   89 (267)
T 3t4x_A           15 VTGSTAGIGKAIATSLVAE-GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KYPKVDIL   89 (267)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----HCCCCSEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----hcCCCCEE
Confidence            7999999999999999999 56888999999888777665532           79999999887765    47899999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||...+.++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..++.                    
T Consensus        90 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  149 (267)
T 3t4x_A           90 INNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM--------------------  149 (267)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS--------------------
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc--------------------
Confidence            99999988778888999999999999999999999999999854  48999999998844                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                          +.++...|++||+++++|+++++.++.+.    ||+||+|+||+++|++.
T Consensus       150 --------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~  195 (267)
T 3t4x_A          150 --------------------PSQEMAHYSATKTMQLSLSRSLAELTTGT----NVTVNTIMPGSTLTEGV  195 (267)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTS----EEEEEEEEECCBCCHHH
T ss_pred             --------------------CCCcchHHHHHHHHHHHHHHHHHHHhCCC----CeEEEEEeCCeecCccH
Confidence                                45566999999999999999999999987    78899999999999853

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.2e-32  Score=228.37  Aligned_cols=175  Identities=27%  Similarity=0.354  Sum_probs=154.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++|..++++.+|+.+.++...+.+..         +|++|+++++++++++.+.++++|+|||
T Consensus        31 VTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~  110 (267)
T 4iiu_A           31 VTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVS  110 (267)
T ss_dssp             ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEE
T ss_pred             EECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEE
Confidence            7999999999999999999665556677888777776665532         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||.....++.+.+.++|++++++|+.|++.+++++++.|.   +.++||++||..+..                     
T Consensus       111 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  169 (267)
T 4iiu_A          111 NAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM---------------------  169 (267)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH---------------------
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc---------------------
Confidence            99998777778889999999999999999999999988763   458999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|++||+|+++|+++++.++++.    ||+||+|+||+++|++...
T Consensus       170 -------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~  217 (267)
T 4iiu_A          170 -------------------GNRGQVNYSAAKAGIIGATKALAIELAKR----KITVNCIAPGLIDTGMIEM  217 (267)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSTTCCC
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEEeeecCCcccc
Confidence                               44566899999999999999999999987    7999999999999999764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-32  Score=228.32  Aligned_cols=174  Identities=24%  Similarity=0.294  Sum_probs=145.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---h---------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---Q---------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---~---------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++   .         .+|++|+++++++++++.+.++++|+
T Consensus        11 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (278)
T 1spx_A           11 ITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDI   89 (278)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999 568889999988887766555   1         28999999999999999999999999


Q ss_pred             EEEccCCccccCCCCC----ChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCc-cccccchHHHHHHhhhh
Q psy7994          69 LVNNAAIAFKVNSSEP----FGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCG-HLCHVTSEALKKKLLHE  142 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~----~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~-~~~~~~~~~~~~~~~~~  142 (230)
                      ||||||.....++.+.    +.+.|++++++|+.|++.++++++|.|++ +++||++||..+ ..               
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---------------  154 (278)
T 1spx_A           90 LVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH---------------  154 (278)
T ss_dssp             EEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS---------------
T ss_pred             EEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEeccccccc---------------
Confidence            9999998766666666    88999999999999999999999999863 489999999887 43               


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                               +.++...|++||+++++++++++.++.+.    ||+||+|+||++.|++...
T Consensus       155 -------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  202 (278)
T 1spx_A          155 -------------------------ATPDFPYYSIAKAAIDQYTRNTAIDLIQH----GIRVNSISPGLVATGFGSA  202 (278)
T ss_dssp             -------------------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCCCC---
T ss_pred             -------------------------CCCCccHHHHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCcccCccccc
Confidence                                     33455899999999999999999999987    7889999999999998653

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.9e-32  Score=226.16  Aligned_cols=173  Identities=24%  Similarity=0.278  Sum_probs=152.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        19 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   97 (260)
T 2zat_A           19 VTASTDGIGLAIARRLAQD-GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVS   97 (260)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5688899999887776655543         28999999999999999999999999999


Q ss_pred             ccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||... ..++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..++.                     
T Consensus        98 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  156 (260)
T 2zat_A           98 NAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH---------------------  156 (260)
T ss_dssp             CCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS---------------------
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC---------------------
Confidence            999863 356677889999999999999999999999999864  47999999988843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|++||++++.|+++++.++.+.    ||+||+|+||++.|++..
T Consensus       157 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~  203 (260)
T 2zat_A          157 -------------------PFPNLGPYNVSKTALLGLTKNLAVELAPR----NIRVNCLAPGLIKTNFSQ  203 (260)
T ss_dssp             -------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSTTH
T ss_pred             -------------------CCCCchhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEECcccCccch
Confidence                               34456899999999999999999999987    789999999999999854

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=5.7e-33  Score=230.86  Aligned_cols=175  Identities=26%  Similarity=0.347  Sum_probs=149.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+ .+..+...+.+.         .+|++|+++++++++++.+.++++|+||
T Consensus        34 ITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li  112 (271)
T 4iin_A           34 ITGASKGIGAEIAKTLASM-GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLV  112 (271)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999999 5577788884 444444444332         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||...+..+.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                     
T Consensus       113 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  171 (271)
T 4iin_A          113 NNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER---------------------  171 (271)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------------------
T ss_pred             ECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC---------------------
Confidence            9999987777778899999999999999999999999999864  48999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.++...|++||+++++++++++.++...    ||+||+|+||+++|++.+..
T Consensus       172 -------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~  220 (271)
T 4iin_A          172 -------------------GNMGQTNYSASKGGMIAMSKSFAYEGALR----NIRFNSVTPGFIETDMNANL  220 (271)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCCC-----
T ss_pred             -------------------CCCCchHhHHHHHHHHHHHHHHHHHHHHh----CcEEEEEEeCcccCCchhhh
Confidence                               44566899999999999999999999887    79999999999999997654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.1e-32  Score=229.53  Aligned_cols=173  Identities=23%  Similarity=0.279  Sum_probs=150.0

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+  +|||+++++.|+++ +..|++++|+.+ .++..+++         ..+|++|+++++++++++.+.++++|+|
T Consensus        11 VTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   88 (275)
T 2pd4_A           11 IVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFI   88 (275)
T ss_dssp             EECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEE
T ss_pred             EECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            79999  99999999999999 567888898875 33222222         2389999999999999999999999999


Q ss_pred             EEccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          70 VNNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        70 v~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |||||....    .++.+.+.+.|++++++|+.|++.++++++|.|+++++||++||..+..                  
T Consensus        89 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------------  150 (275)
T 2pd4_A           89 VHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------------------  150 (275)
T ss_dssp             EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------------
T ss_pred             EECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC------------------
Confidence            999998754    5666788999999999999999999999999998779999999988743                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                            +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.+.
T Consensus       151 ----------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~  198 (275)
T 2pd4_A          151 ----------------------YMAHYNVMGLAKAALESAVRYLAVDLGKH----HIRVNALSAGPIRTLASSG  198 (275)
T ss_dssp             ----------------------BCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCTTGGG
T ss_pred             ----------------------CCCCchhhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCccccchhhh
Confidence                                  34456899999999999999999999987    7889999999999998654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.9e-32  Score=222.52  Aligned_cols=174  Identities=26%  Similarity=0.257  Sum_probs=147.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.     .+|++|+++++++++++.+.++++|+||||||.
T Consensus        10 VtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~   88 (234)
T 2ehd_A           10 ITGASRGIGEATARLLHAK-GYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGV   88 (234)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            7999999999999999999 5688889999887777665442     389999999999999999999999999999998


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      ....++.+.+.+.|++++++|+.|++.+++.++|.|++  .++||++||..+..                          
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--------------------------  142 (234)
T 2ehd_A           89 GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN--------------------------  142 (234)
T ss_dssp             CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS--------------------------
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC--------------------------
Confidence            77667777889999999999999999999999999865  38999999988843                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                    +.++...|+++|++++.++++++.++...    |+++++|+||+++|++...
T Consensus       143 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  190 (234)
T 2ehd_A          143 --------------PFKGGAAYNASKFGLLGLAGAAMLDLREA----NVRVVNVLPGSVDTGFAGN  190 (234)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEECC---------
T ss_pred             --------------CCCCCchhhHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeCCCcCCcccc
Confidence                          34456899999999999999999999987    7899999999999998654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.2e-32  Score=227.80  Aligned_cols=172  Identities=26%  Similarity=0.410  Sum_probs=153.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.          .+|++|+++++++++++.+.++++|+||
T Consensus        12 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   90 (263)
T 3ai3_A           12 ITGSSSGIGLAIAEGFAKE-GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILV   90 (263)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 5688889999887776555442          2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..++.                     
T Consensus        91 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------  149 (263)
T 3ai3_A           91 NNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ---------------------  149 (263)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------------------
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC---------------------
Confidence            9999987777888899999999999999999999999999853  48999999998844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                         +.++...|++||++++.++++++.++.+.    ||+||+|+||++.|++.
T Consensus       150 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~  195 (263)
T 3ai3_A          150 -------------------PLWYEPIYNVTKAALMMFSKTLATEVIKD----NIRVNCINPGLILTPDW  195 (263)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCHHH
T ss_pred             -------------------CCCCcchHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCcccCcch
Confidence                               34456899999999999999999999887    79999999999999874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.4e-32  Score=228.56  Aligned_cols=175  Identities=24%  Similarity=0.278  Sum_probs=146.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++|..++++..|+.+.++...+.+..         +|++|+++++++++++.+.++++|+|||
T Consensus        31 ITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~  110 (272)
T 4e3z_A           31 VTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVN  110 (272)
T ss_dssp             ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            7999999999999999999654445558888777766655432         8999999999999999999999999999


Q ss_pred             ccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          72 NAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        72 ~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |||.... .++.+.+.+.|++++++|+.|++.++++++|.|++     .++||++||..+..                  
T Consensus       111 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------  172 (272)
T 4e3z_A          111 NAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL------------------  172 (272)
T ss_dssp             CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHH------------------
T ss_pred             CCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhcc------------------
Confidence            9998754 66777899999999999999999999999998864     57999999988743                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCC-CCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGW-PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                            +.+ +...|++||+++++|+++++.++++.    ||+|++|+||+++|++...
T Consensus       173 ----------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          173 ----------------------GSATQYVDYAASKAAIDTFTIGLAREVAAE----GIRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             ----------------------CCTTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBC------
T ss_pred             ----------------------CCCCCcchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEecCCCcCCcccc
Confidence                                  222 34789999999999999999999987    7899999999999998654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.8e-32  Score=229.22  Aligned_cols=172  Identities=18%  Similarity=0.249  Sum_probs=149.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-hHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-GQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.+. .+...+.+.         .+|++|+++++++++++.+.++++|+||
T Consensus        34 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv  112 (283)
T 1g0o_A           34 VTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVC  112 (283)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 5578888887654 344333332         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||||.....++.+.+.++|++++++|+.|+++++++++|.|++.++||++||..+..                       
T Consensus       113 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------------------  169 (283)
T 1g0o_A          113 SNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA-----------------------  169 (283)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC-----------------------
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhcc-----------------------
Confidence            999998767777889999999999999999999999999997779999999988743                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCC-CCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGW-PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                       +.+ +...|++||+++++|+++++.|+++.    ||+||+|+||++.|++.
T Consensus       170 -----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~  216 (283)
T 1g0o_A          170 -----------------KAVPKHAVYSGSKGAIETFARCMAIDMADK----KITVNVVAPGGIKTDMY  216 (283)
T ss_dssp             -----------------SSCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHH
T ss_pred             -----------------CCCCCCcchHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCcccchhh
Confidence                             222 25899999999999999999999987    78899999999999874

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.8e-33  Score=232.71  Aligned_cols=170  Identities=21%  Similarity=0.274  Sum_probs=148.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++++|+.+..... .....+|++|+++++++++++.+.++++|+||||||.....+
T Consensus        19 VTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~   96 (269)
T 3vtz_A           19 VTGGSSGIGLAVVDALVRY-GAKVVSVSLDEKSDVNV-SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSP   96 (269)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESCC--CTTS-SEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchhccCc-eeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            7999999999999999999 56788888887655331 122348999999999999999999999999999999987777


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.+.|++++++|+.|+++++++++|.|++  .|+||++||..++.                               
T Consensus        97 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------------------------  145 (269)
T 3vtz_A           97 LHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA-------------------------------  145 (269)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------------------------
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-------------------------------
Confidence            888899999999999999999999999999853  58999999998854                               


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                               +.++...|++||+++++|+++++.|+++     +|+||+|+||++.|+|.
T Consensus       146 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~-----~i~vn~v~PG~v~T~~~  190 (269)
T 3vtz_A          146 ---------ATKNAAAYVTSKHALLGLTRSVAIDYAP-----KIRCNAVCPGTIMTPMV  190 (269)
T ss_dssp             ---------BCTTCHHHHHHHHHHHHHHHHHHHHHTT-----TEEEEEEEECSBCCHHH
T ss_pred             ---------CCCCChhHHHHHHHHHHHHHHHHHHhcC-----CCEEEEEEECCCcCcch
Confidence                     3445689999999999999999999976     38899999999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=3.9e-32  Score=226.05  Aligned_cols=170  Identities=22%  Similarity=0.169  Sum_probs=147.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhhh----------cccCCCH----HHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKLQ----------KLDILDK----NSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~~----------~~D~s~~----~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||++++++|+++ +..|++++| +.++++...+++.          .+|++|+    ++++++++++.+.+++
T Consensus        16 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~   94 (276)
T 1mxh_A           16 ITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGR   94 (276)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999 567888888 8777776655542          2899999    9999999999999999


Q ss_pred             CcEEEEccCCccccCCCCCCh-----------hHHHHHHHHhhhhHHHHHHHhccccc-CC------ceEEEecCCCccc
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFG-----------SQALHTMRTNYFALIDVCDILFPLLR-SH------GRVVNVSSSCGHL  127 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~g~~~l~~~~~~~l~-~~------g~ii~~sS~~~~~  127 (230)
                      +|+||||||.....++.+.+.           +.|++++++|+.|++.++++++|.|+ ..      ++||++||..++.
T Consensus        95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  174 (276)
T 1mxh_A           95 CDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL  174 (276)
T ss_dssp             CCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGS
T ss_pred             CCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcC
Confidence            999999999877677777777           99999999999999999999999986 33      8999999988843


Q ss_pred             cccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEe
Q psy7994         128 CHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCV  207 (230)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v  207 (230)
                                                              +.++...|++||+++++|+++++.++++.    ||+||+|
T Consensus       175 ----------------------------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~----gi~v~~v  210 (276)
T 1mxh_A          175 ----------------------------------------PLPGFCVYTMAKHALGGLTRAAALELAPR----HIRVNAV  210 (276)
T ss_dssp             ----------------------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEE
T ss_pred             ----------------------------------------CCCCCeehHHHHHHHHHHHHHHHHHHhhc----CeEEEEE
Confidence                                                    44456899999999999999999999987    7999999


Q ss_pred             cCCccccC
Q psy7994         208 HPGYVNTD  215 (230)
Q Consensus       208 ~pG~v~t~  215 (230)
                      +||++.|+
T Consensus       211 ~PG~v~t~  218 (276)
T 1mxh_A          211 APGLSLLP  218 (276)
T ss_dssp             EESSBSCC
T ss_pred             ecCcccCC
Confidence            99999998

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.7e-32  Score=226.66  Aligned_cols=172  Identities=19%  Similarity=0.118  Sum_probs=153.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.           .+|++|+++++++++++.+.++ +|+|
T Consensus        12 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~l   89 (260)
T 2z1n_A           12 VTAGSSGLGFASALELARN-GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-ADIL   89 (260)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CSEE
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CCEE
Confidence            7999999999999999999 5688889999887776655442           2899999999999999999999 9999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||.....++.+.+.+.|++++++|+.|+++++++++|.|++  .++||++||..++.                    
T Consensus        90 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  149 (260)
T 2z1n_A           90 VYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR--------------------  149 (260)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC--------------------
Confidence            99999877677778899999999999999999999999999863  48999999988843                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|++||++++.++++++.++.+.    ||+||+|+||++.|++..
T Consensus       150 --------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          150 --------------------PWQDLALSNIMRLPVIGVVRTLALELAPH----GVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             --------------------CCTTBHHHHHHTHHHHHHHHHHHHHHGGG----TEEEEEEEECHHHHCCCC
T ss_pred             --------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhh----CeEEEEEEECCcccchhh
Confidence                                34456899999999999999999999987    789999999999999876

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=2e-32  Score=226.27  Aligned_cols=176  Identities=20%  Similarity=0.293  Sum_probs=147.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++| ..|++++|+. +..+...+.+.         .+|++|+++++++++++.+.++++|+||
T Consensus        12 VTGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv   90 (264)
T 3i4f_A           12 ITAGTKGLGKQVTEKLLAKG-YSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLI   90 (264)
T ss_dssp             ETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCchhHHHHHHHHHHCC-CEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            79999999999999999995 5666665554 44444433332         2899999999999999999999999999


Q ss_pred             EccC--CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAA--IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag--~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||  .....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||.....                   
T Consensus        91 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------------------  151 (264)
T 3i4f_A           91 NNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADS-------------------  151 (264)
T ss_dssp             CCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGG-------------------
T ss_pred             ECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcc-------------------
Confidence            9999  444566777889999999999999999999999999864  48999999884421                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         ..+.++...|++||+++++|+++++.++++.    ||+||+|+||++.|++.+.
T Consensus       152 -------------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~  201 (264)
T 3i4f_A          152 -------------------APGWIYRSAFAAAKVGLVSLTKTVAYEEAEY----GITANMVCPGDIIGEMKEA  201 (264)
T ss_dssp             -------------------CCCCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCGGGGSC
T ss_pred             -------------------cCCCCCCchhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEccCCccCccchh
Confidence                               1234456899999999999999999999987    7999999999999998764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-32  Score=230.30  Aligned_cols=173  Identities=24%  Similarity=0.302  Sum_probs=152.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||+++++.|+++ +..|++++|++++++...+++.            .+|++|+++++++++++.+.++++|+
T Consensus        31 VTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  109 (297)
T 1xhl_A           31 ITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDI  109 (297)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999 5688889999887776654431            28999999999999999999999999


Q ss_pred             EEEccCCccccC--CCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          69 LVNNAAIAFKVN--SSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        69 lv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||||.....+  +.+.+.+.|++++++|+.|++.++++++|.|+ ++++||++||..+..                  
T Consensus       110 lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~------------------  171 (297)
T 1xhl_A          110 LVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP------------------  171 (297)
T ss_dssp             EEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS------------------
T ss_pred             EEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhcc------------------
Confidence            999999876555  67788999999999999999999999999986 348999999988743                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCC-CCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGG-WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                            +. ++...|++||++++.|+++++.|+++.    ||+||+|+||+++|++..
T Consensus       172 ----------------------~~~~~~~~Y~asKaa~~~l~~~la~el~~~----gI~v~~v~PG~v~T~~~~  219 (297)
T 1xhl_A          172 ----------------------QAHSGYPYYACAKAALDQYTRCTAIDLIQH----GVRVNSVSPGAVATGFMG  219 (297)
T ss_dssp             ----------------------SCCTTSHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSSHHH
T ss_pred             ----------------------CCCCCcchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCcCcccc
Confidence                                  23 456899999999999999999999987    788999999999999854

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-32  Score=228.85  Aligned_cols=173  Identities=25%  Similarity=0.293  Sum_probs=152.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||++++++|+++ +..|++++|+++++++..+++.            .+|++|+++++++++++.+.++++|+
T Consensus        11 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   89 (280)
T 1xkq_A           11 ITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDV   89 (280)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999 5688889999888776655431            28999999999999999999999999


Q ss_pred             EEEccCCccccC----CCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          69 LVNNAAIAFKVN----SSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        69 lv~~ag~~~~~~----~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ||||||.....+    +.+.+.+.|++++++|+.|++.++++++|.|+ ++++||++||..+..                
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  153 (280)
T 1xkq_A           90 LVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP----------------  153 (280)
T ss_dssp             EEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS----------------
T ss_pred             EEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccC----------------
Confidence            999999876555    66778899999999999999999999999885 348999999988743                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCC-CCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGG-WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                              +. ++...|++||+++++|+++++.++++.    ||+||+|+||++.|++..
T Consensus       154 ------------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~  201 (280)
T 1xkq_A          154 ------------------------QAQPDFLYYAIAKAALDQYTRSTAIDLAKF----GIRVNSVSPGMVETGFTN  201 (280)
T ss_dssp             ------------------------SCCCSSHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCBCSSHHH
T ss_pred             ------------------------CCCCcccHHHHHHHHHHHHHHHHHHHhccC----CeEEEEEeeCcCcCCccc
Confidence                                    23 456899999999999999999999987    788999999999999754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.5e-32  Score=229.20  Aligned_cols=172  Identities=30%  Similarity=0.396  Sum_probs=153.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++ +..|++++|++++++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        27 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (277)
T 2rhc_B           27 VTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVN  105 (277)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 5688889999887776655542         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccc--ccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL--LRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~--l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||.....++.+.+.++|++++++|+.|++.++++++|.  |++  .++||++||..+..                    
T Consensus       106 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~--------------------  165 (277)
T 2rhc_B          106 NAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--------------------  165 (277)
T ss_dssp             CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS--------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc--------------------
Confidence            999877677778889999999999999999999999998  753  38999999988743                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                          +.++...|++||++++.|+++++.++.+.    ||+||+|+||++.|++.
T Consensus       166 --------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~  211 (277)
T 2rhc_B          166 --------------------GVVHAAPYSASKHGVVGFTKALGLELART----GITVNAVCPGFVETPMA  211 (277)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTT----EEEEEEEEECSBCSHHH
T ss_pred             --------------------CCCCCccHHHHHHHHHHHHHHHHHHHHHh----CcEEEEEecCcCcCchh
Confidence                                44556899999999999999999999987    78899999999999874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.1e-32  Score=225.43  Aligned_cols=170  Identities=31%  Similarity=0.413  Sum_probs=148.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.+  +...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus         9 VTGas~giG~~ia~~l~~~-G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~   85 (255)
T 2q2v_A            9 VTGSTSGIGLGIAQVLARA-GANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVN   85 (255)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 557888888765  33333321         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                      
T Consensus        86 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------------  143 (255)
T 2q2v_A           86 NAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV----------------------  143 (255)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc----------------------
Confidence            999877677778889999999999999999999999999964  38999999988843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                        +.++...|+++|+++++|+++++.++.+.    ||+||+|+||++.|++.
T Consensus       144 ------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~  189 (255)
T 2q2v_A          144 ------------------GSTGKAAYVAAKHGVVGLTKVVGLETATS----NVTCNAICPGWVLTPLV  189 (255)
T ss_dssp             ------------------CCTTBHHHHHHHHHHHHHHHHHHHHTTTS----SEEEEEEEESSBCCHHH
T ss_pred             ------------------CCCCchhHHHHHHHHHHHHHHHHHHhccc----CcEEEEEeeCCCcCcch
Confidence                              34456899999999999999999999987    79999999999999874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=4.2e-33  Score=229.88  Aligned_cols=173  Identities=18%  Similarity=0.246  Sum_probs=142.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||++|||++++++|+++ +..|++++|..+.......   .+..+|++|+++++++++.+.+ ++++|+||||||...
T Consensus        14 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~   91 (257)
T 3tl3_A           14 VTGGASGLGLATTKRLLDA-GAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAET-MGTLRIVVNCAGTGN   91 (257)
T ss_dssp             EETTTSHHHHHHHHHHHHH-TCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEEEEECGGGSH
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCC
Confidence            7999999999999999999 5677788885544332211   1123899999999999999877 899999999999864


Q ss_pred             ccC----CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----------CceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          78 KVN----SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----------HGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        78 ~~~----~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----------~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ...    ..+.+.+.|++++++|+.|+++++++++|.|++          .|+||++||..+...               
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  156 (257)
T 3tl3_A           92 AIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG---------------  156 (257)
T ss_dssp             HHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC---------------
T ss_pred             CcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC---------------
Confidence            322    234788999999999999999999999999865          479999999988542               


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                               .++...|++||+++++|+++++.|+++.    ||+||+|+||+++|+|.+.
T Consensus       157 -------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~  203 (257)
T 3tl3_A          157 -------------------------QIGQAAYSASKGGVVGMTLPIARDLASH----RIRVMTIAPGLFDTPLLAS  203 (257)
T ss_dssp             -------------------------HHHHHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTC--
T ss_pred             -------------------------CCCCccHHHHHHHHHHHHHHHHHHhccc----CcEEEEEEecCccChhhhh
Confidence                                     2234799999999999999999999987    7999999999999999765

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.3e-32  Score=224.17  Aligned_cols=173  Identities=24%  Similarity=0.243  Sum_probs=148.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhh-cCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAE-HGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~-~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.         .+|++|+++++++++++.+. ++++|+||
T Consensus        10 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lv   88 (260)
T 2qq5_A           10 VTGASRGIGRGIALQLCKA-GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLV   88 (260)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEE
Confidence            7999999999999999999 5688889999888777665542         28999999999999999886 89999999


Q ss_pred             EccCC--c-----cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhh
Q psy7994          71 NNAAI--A-----FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLH  141 (230)
Q Consensus        71 ~~ag~--~-----~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~  141 (230)
                      ||||.  .     ...++.+.+.+.|++++++|+.++++++++++|.|++  .++||++||..+..              
T Consensus        89 nnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  154 (260)
T 2qq5_A           89 NNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ--------------  154 (260)
T ss_dssp             ECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS--------------
T ss_pred             ECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC--------------
Confidence            99953  2     2356777888999999999999999999999998864  48999999988743              


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         142 EIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                                 ..+...|++||+++++|+++++.++++.    ||+||+|+||+++|+|...
T Consensus       155 ---------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~  201 (260)
T 2qq5_A          155 ---------------------------YMFNVPYGVGKAACDKLAADCAHELRRH----GVSCVSLWPGIVQTELLKE  201 (260)
T ss_dssp             ---------------------------CCSSHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEECCCSCTTTC--
T ss_pred             ---------------------------CCCCCchHHHHHHHHHHHHHHHHHhccC----CeEEEEEecCccccHHHHH
Confidence                                       1234789999999999999999999987    7889999999999999654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.9e-32  Score=233.46  Aligned_cols=174  Identities=22%  Similarity=0.276  Sum_probs=151.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-------hHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-------GQEALEKLQK---------LDILDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-------~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~   64 (230)
                      ||||++|||++++++|+++ +.+|++++|+.++       ++...+++..         +|++|+++++++++++.+.++
T Consensus        50 VTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  128 (346)
T 3kvo_A           50 ITGASRGIGKAIALKAAKD-GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFG  128 (346)
T ss_dssp             EETTTSHHHHHHHHHHHTT-TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EeCCChHHHHHHHHHHHHC-CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            7999999999999999999 5688888988764       3444444432         899999999999999999999


Q ss_pred             CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          65 GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        65 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                      +||+||||||.....++.+.+.+.|++++++|+.|+++++++++|.|+++  ++||++||..+....             
T Consensus       129 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~-------------  195 (346)
T 3kvo_A          129 GIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV-------------  195 (346)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG-------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC-------------
Confidence            99999999999888888899999999999999999999999999999754  899999999885421             


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCc-cccCCCC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGY-VNTDMSS  218 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~-v~t~~~~  218 (230)
                                               +.++...|++||+++++|+++++.|++ .    ||+||+|+||+ ++|++.+
T Consensus       196 -------------------------~~~~~~~Y~aSKaal~~l~~~la~e~~-~----gIrvn~v~PG~~i~T~~~~  242 (346)
T 3kvo_A          196 -------------------------WFKQHCAYTIAKYGMSMYVLGMAEEFK-G----EIAVNALWPKTAIHTAAMD  242 (346)
T ss_dssp             -------------------------GTSSSHHHHHHHHHHHHHHHHHHHHTT-T----TCEEEEEECSBCBCCHHHH
T ss_pred             -------------------------CCCCchHHHHHHHHHHHHHHHHHHHhc-C----CcEEEEEeCCCccccHHHH
Confidence                                     134568999999999999999999998 6    79999999995 8997643

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=9.2e-32  Score=225.07  Aligned_cols=173  Identities=20%  Similarity=0.252  Sum_probs=147.8

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+  +|||+++++.|+++ +..|++++|+.+ .+...+++         ..+|++|+++++++++++.+.++++|+|
T Consensus        26 VTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l  103 (285)
T 2p91_A           26 ITGVANERSIAYGIAKSFHRE-GAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDII  103 (285)
T ss_dssp             ECCCSSTTSHHHHHHHHHHHT-TCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCEE
T ss_pred             EECCCCCCcHHHHHHHHHHHc-CCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            79999  99999999999999 567888888875 33222222         2389999999999999999999999999


Q ss_pred             EEccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          70 VNNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        70 v~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |||||....    .++.+.+.+.|++++++|+.|++.++++++|.|+ +.++||++||..+..                 
T Consensus       104 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------------  166 (285)
T 2p91_A          104 VHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK-----------------  166 (285)
T ss_dssp             EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS-----------------
T ss_pred             EECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc-----------------
Confidence            999998653    4566788899999999999999999999999997 458999999988743                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                             +.++...|++||+++++++++++.++++.    ||+||+|+||++.|++.+.
T Consensus       167 -----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~  214 (285)
T 2p91_A          167 -----------------------VVPHYNVMGIAKAALESTVRYLAYDIAKH----GHRINAISAGPVKTLAAYS  214 (285)
T ss_dssp             -----------------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCSCC--
T ss_pred             -----------------------CCCCccHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEEeCcccCchhhc
Confidence                                   33456899999999999999999999987    7889999999999998654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=3.2e-32  Score=225.52  Aligned_cols=173  Identities=14%  Similarity=0.164  Sum_probs=148.4

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+  +|||++++++|+++ +..|++++|+. +.++..+++         ..+|++|+++++++++++.+.++++|+|
T Consensus        14 VTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   91 (265)
T 1qsg_A           14 VTGVASKLSIAYGIAQAMHRE-GAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGF   91 (265)
T ss_dssp             ECCCCSTTSHHHHHHHHHHHT-TCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEE
T ss_pred             EECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            79999  99999999999999 56788888877 333332222         2389999999999999999999999999


Q ss_pred             EEccCCccc----cCCCC-CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          70 VNNAAIAFK----VNSSE-PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        70 v~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |||||....    .++.+ .+.+.|++++++|+.|+++++++++|.|++.++||++||..+..                 
T Consensus        92 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------------  154 (265)
T 1qsg_A           92 VHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------------  154 (265)
T ss_dssp             EECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------------
T ss_pred             EECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc-----------------
Confidence            999998653    44556 78899999999999999999999999998779999999987743                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                             +.++...|++||+++++++++++.++++.    ||+||+|+||+++|++.+.
T Consensus       155 -----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~  202 (265)
T 1qsg_A          155 -----------------------AIPNYNVMGLAKASLEANVRYMANAMGPE----GVRVNAISAGPIRTLAASG  202 (265)
T ss_dssp             -----------------------BCTTTTHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCCCCTTGGG
T ss_pred             -----------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCCCccchhhc
Confidence                                   33455899999999999999999999887    7999999999999998654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-32  Score=230.98  Aligned_cols=171  Identities=20%  Similarity=0.171  Sum_probs=151.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEe-cCcchhHHHHHhhh----------cccCCCHH-----------------HH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTA-RDASRGQEALEKLQ----------KLDILDKN-----------------SI   52 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~-r~~~~~~~~~~~~~----------~~D~s~~~-----------------~v   52 (230)
                      ||||++|||+++++.|+++ +..|++++ |+.++++...+++.          .+|++|++                 ++
T Consensus        51 VTGas~GIG~aia~~La~~-G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v  129 (328)
T 2qhx_A           51 VTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRC  129 (328)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHHHH
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHHHH
Confidence            7999999999999999999 45788888 99888877766553          28999999                 99


Q ss_pred             HHHHHHHHhhcCCCcEEEEccCCccccCCCCCC--------------hhHHHHHHHHhhhhHHHHHHHhcccccC-----
Q psy7994          53 KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPF--------------GSQALHTMRTNYFALIDVCDILFPLLRS-----  113 (230)
Q Consensus        53 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----  113 (230)
                      +++++++.+.++++|+||||||.....++.+.+              .+.|++++++|+.|++.++++++|.|++     
T Consensus       130 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~  209 (328)
T 2qhx_A          130 AELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKH  209 (328)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence            999999999999999999999997767777777              8999999999999999999999999853     


Q ss_pred             ---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHH
Q psy7994         114 ---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQH  190 (230)
Q Consensus       114 ---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la  190 (230)
                         .++||++||..+..                                        +.++...|++||+++++|+++++
T Consensus       210 ~~~~g~IV~isS~~~~~----------------------------------------~~~~~~~Y~asKaal~~l~~~la  249 (328)
T 2qhx_A          210 RGTNYSIINMVDAMTNQ----------------------------------------PLLGYTIYTMAKGALEGLTRSAA  249 (328)
T ss_dssp             SCSCEEEEEECCTTTTS----------------------------------------CCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECchhhcc----------------------------------------CCCCcHHHHHHHHHHHHHHHHHH
Confidence               57999999998843                                        44566899999999999999999


Q ss_pred             HhhhhhhccCCeEEEEecCCccccCC
Q psy7994         191 ALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       191 ~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                      .++++.    ||+||+|+||+++|++
T Consensus       250 ~el~~~----gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          250 LELAPL----QIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HHHGGG----TEEEEEEEESSBSCCC
T ss_pred             HHHhhc----CcEEEEEecCcccCCc
Confidence            999987    7999999999999998

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=3.9e-32  Score=224.64  Aligned_cols=174  Identities=20%  Similarity=0.253  Sum_probs=149.1

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHh-----hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEK-----LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~-----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+  +|||++++++|+++ +..|++++|+.+   .+++..+.     +..+|++|+++++++++++.+.++++|+||
T Consensus        13 VTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv   91 (261)
T 2wyu_A           13 VMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLV   91 (261)
T ss_dssp             EESCCSSSSHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEE
T ss_pred             EECCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999  99999999999999 567888888875   22222221     123899999999999999999999999999


Q ss_pred             EccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||....    .++.+.+.++|++++++|+.|+++++++++|.|+++++||++||..+..                   
T Consensus        92 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-------------------  152 (261)
T 2wyu_A           92 HAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-------------------  152 (261)
T ss_dssp             ECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-------------------
T ss_pred             ECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC-------------------
Confidence            99998653    5666788999999999999999999999999998779999999987743                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                           +.++...|++||++++.++++++.++++.    ||+||+|+||++.|++...
T Consensus       153 ---------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  200 (261)
T 2wyu_A          153 ---------------------VVPKYNVMAIAKAALEASVRYLAYELGPK----GVRVNAISAGPVRTVAARS  200 (261)
T ss_dssp             ---------------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCCCCTGGGG
T ss_pred             ---------------------CCCCchHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEeeCCCcCchhhh
Confidence                                 33456899999999999999999999987    7889999999999998653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=3.5e-32  Score=225.88  Aligned_cols=171  Identities=15%  Similarity=0.185  Sum_probs=149.4

Q ss_pred             CCCC--CCcHHHHHHHHHHHhcCCeEEEEecCcch-hHHHHHhhh------cccCCCHHHHHHHHHHHHhhcC---CCcE
Q psy7994           1 VTGA--NKGIGYGIVKGLIQQFDGIIYLTARDASR-GQEALEKLQ------KLDILDKNSIKALHDHLEAEHG---GVDV   68 (230)
Q Consensus         1 ItG~--s~giG~~~a~~la~~g~~~vi~~~r~~~~-~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~---~id~   68 (230)
                      ||||  ++|||++++++|+++ +..|++++|+.++ ++...+++.      .+|++|+++++++++++.+.++   ++|+
T Consensus        12 VTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~   90 (269)
T 2h7i_A           12 VSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDG   90 (269)
T ss_dssp             ECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred             EECCCCCCchHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceE
Confidence            7999  999999999999999 5678888998765 355544432      2899999999999999999999   9999


Q ss_pred             EEEccCCcc-----ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          69 LVNNAAIAF-----KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        69 lv~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ||||||...     ..++.+.+.++|++++++|+.|++.++++++|.|+++++||++||..+.                 
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-----------------  153 (269)
T 2h7i_A           91 VVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-----------------  153 (269)
T ss_dssp             EEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-----------------
T ss_pred             EEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-----------------
Confidence            999999865     3566778899999999999999999999999999888999999987652                 


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                              +.+++..|++||+++++|+++++.++++.    ||+||+|+||+++|+|.
T Consensus       154 ------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~  199 (269)
T 2h7i_A          154 ------------------------AMPAYNWMTVAKSALESVNRFVAREAGKY----GVRSNLVAAGPIRTLAM  199 (269)
T ss_dssp             ------------------------CCTTTHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCHHH
T ss_pred             ------------------------ccCchHHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCcccchhh
Confidence                                    23456899999999999999999999987    78899999999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.4e-32  Score=225.66  Aligned_cols=171  Identities=26%  Similarity=0.370  Sum_probs=144.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...  ...+|++|+++++++++++.+.++++|+||||||.....+
T Consensus        20 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~   96 (247)
T 1uzm_A           20 VTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPKGLF--GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF   96 (247)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCTTSE--EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC---
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHhc--CeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            7999999999999999999 567888899876554321  1348999999999999999999999999999999987777


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+..                               
T Consensus        97 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------------------------  145 (247)
T 1uzm_A           97 LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-------------------------------  145 (247)
T ss_dssp             --CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------------------------
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc-------------------------------
Confidence            788899999999999999999999999999864  38999999998843                               


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                               +.++...|++||++++.|+++++.++.+.    ||+||+|+||+++|++.+
T Consensus       146 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~  192 (247)
T 1uzm_A          146 ---------GIGNQANYAASKAGVIGMARSIARELSKA----NVTANVVAPGYIDTDMTR  192 (247)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred             ---------CCCCChhHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEeCCCcccchh
Confidence                     33456899999999999999999999987    799999999999998743

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.5e-32  Score=231.18  Aligned_cols=174  Identities=22%  Similarity=0.238  Sum_probs=144.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-----cchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-----ASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-----~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||++|||+++++.|+++ +..|+++.|+     .++++...+.+.         .+|++|+++++++++++.+.+|++
T Consensus        10 VTGas~GIG~aia~~L~~~-G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~i   88 (324)
T 3u9l_A           10 ITGASSGFGRLTAEALAGA-GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRI   88 (324)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999 5677777665     333444333322         289999999999999999999999


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |+||||||.....++.+.+.++|++++++|+.|++.++++++|.|+  +.|+||++||..+...                
T Consensus        89 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~----------------  152 (324)
T 3u9l_A           89 DVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG----------------  152 (324)
T ss_dssp             SEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC----------------
Confidence            9999999998778888899999999999999999999999999996  3589999999888431                


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                             +.++...|++||+++++++++++.|+++.    ||+||+|+||++.|++..
T Consensus       153 -----------------------~~~~~~~Y~asKaa~~~~~~~la~el~~~----gI~v~~v~PG~v~t~~~~  199 (324)
T 3u9l_A          153 -----------------------TPPYLAPYFAAKAAMDAIAVQYARELSRW----GIETSIIVPGAFTSGTNH  199 (324)
T ss_dssp             -----------------------CCSSCHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECCC------
T ss_pred             -----------------------CCCcchhHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEECCccccCchh
Confidence                                   12334789999999999999999999987    799999999999987643

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-32  Score=228.71  Aligned_cols=172  Identities=27%  Similarity=0.403  Sum_probs=151.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.     .+|++|+++++++++++.+.++++|+||||||.
T Consensus        14 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~   92 (270)
T 1yde_A           14 VTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGH   92 (270)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            7999999999999999999 5678889999888777665543     389999999999999999999999999999998


Q ss_pred             cc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          76 AF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        76 ~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      .. ..++.+.+.++|++++++|+.|++.++++++|.|++ .++||++||..+..                          
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~--------------------------  146 (270)
T 1yde_A           93 HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI--------------------------  146 (270)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH--------------------------
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccC--------------------------
Confidence            64 356677888999999999999999999999999864 68999999987633                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                    +.++...|++||+++++++++++.++++.    ||+||+|+||++.|++.
T Consensus       147 --------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~Pg~v~t~~~  192 (270)
T 1yde_A          147 --------------GQAQAVPYVATKGAVTAMTKALALDESPY----GVRVNCISPGNIWTPLW  192 (270)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCHHH
T ss_pred             --------------CCCCCcccHHHHHHHHHHHHHHHHHhhhh----CcEEEEEEeCccccchh
Confidence                          33456899999999999999999999987    78899999999999874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.98  E-value=4e-32  Score=224.63  Aligned_cols=172  Identities=24%  Similarity=0.337  Sum_probs=153.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        17 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag   95 (263)
T 3ak4_A           17 VTGGSKGIGAAIARALDKA-GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAG   95 (263)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 5688889999888877666543      38999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      .....++.+.+.++|++++++|+.|++.++++++|.|++   .++||++||..+..                        
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------------  151 (263)
T 3ak4_A           96 VSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV------------------------  151 (263)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS------------------------
T ss_pred             cCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc------------------------
Confidence            877667778889999999999999999999999998853   48999999988743                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                      +.++...|++||++++.++++++.++++.    ||+||+|+||++.|++.
T Consensus       152 ----------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~  197 (263)
T 3ak4_A          152 ----------------GAPLLAHYSASKFAVFGWTQALAREMAPK----NIRVNCVCPGFVKTAMQ  197 (263)
T ss_dssp             ----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBTTHHH
T ss_pred             ----------------CCCCchhHHHHHHHHHHHHHHHHHHHhHc----CeEEEEEecccccChhh
Confidence                            34456899999999999999999999987    78899999999999874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.98  E-value=6e-32  Score=222.53  Aligned_cols=175  Identities=21%  Similarity=0.286  Sum_probs=154.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.+++++..+++      ..+|++|+++++++++++.+.++++|+||||||
T Consensus        11 VTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag   89 (253)
T 1hxh_A           11 VTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAG   89 (253)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            7999999999999999999 567889999988877766543      238999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      .....++.+.+.++|++++++|+.|++.++++++|.|++. ++||++||..++.                          
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------------  143 (253)
T 1hxh_A           90 ILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL--------------------------  143 (253)
T ss_dssp             CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS--------------------------
T ss_pred             CCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcC--------------------------
Confidence            9877778889999999999999999999999999999653 8999999988843                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                    +.++...|++||++++.|+++++.++.+.+  .||+||+|+||++.|++..
T Consensus       144 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--~gi~v~~v~Pg~v~t~~~~  192 (253)
T 1hxh_A          144 --------------PIEQYAGYSASKAAVSALTRAAALSCRKQG--YAIRVNSIHPDGIYTPMMQ  192 (253)
T ss_dssp             --------------CCTTBHHHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEESEECCHHHH
T ss_pred             --------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcC--CCeEEEEEEeCCccCchhh
Confidence                          344568999999999999999999998762  1588999999999998743

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.98  E-value=1.5e-32  Score=226.39  Aligned_cols=172  Identities=27%  Similarity=0.348  Sum_probs=144.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++.+|++++++.  -....+|++|+++++++++++.+.++++|+||||||.....+
T Consensus        26 VTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~--~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~  102 (253)
T 2nm0_A           26 VTGGNRGIGLAIARAFADA-GDKVAITYRSGEPPEG--FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL  102 (253)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCTT--SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHhhcc--ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            7999999999999999999 5688888998776543  123348999999999999999999999999999999987777


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+...                              
T Consensus       103 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------------------------  152 (253)
T 2nm0_A          103 LMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG------------------------------  152 (253)
T ss_dssp             ---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC------------------------------
T ss_pred             hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC------------------------------
Confidence            778889999999999999999999999999863  589999999988542                              


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                .++...|+++|++++.|+++++.++++.    ||+||+|+||+++|++...
T Consensus       153 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~  199 (253)
T 2nm0_A          153 ----------SAGQANYAASKAGLVGFARSLARELGSR----NITFNVVAPGFVDTDMTKV  199 (253)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHHCSS----SEEEEEEEECSBCC-----
T ss_pred             ----------CCCcHHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCcCcCcchhh
Confidence                      1233789999999999999999999887    7999999999999998654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.98  E-value=3.5e-32  Score=223.56  Aligned_cols=173  Identities=25%  Similarity=0.286  Sum_probs=144.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++++|+.+..+ ..-....+|++|+++++++++++.+.++++|+||||||.....+
T Consensus        12 VTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~   89 (250)
T 2fwm_X           12 VTGAGKGIGYATALAFVEA-GAKVTGFDQAFTQEQ-YPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGA   89 (250)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCCCSSC-CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCchhhhc-CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            7999999999999999999 567888888765211 00122348999999999999999999999999999999987777


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                               
T Consensus        90 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------------------------  138 (250)
T 2fwm_X           90 TDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT-------------------------------  138 (250)
T ss_dssp             TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-------------------------------
T ss_pred             cccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-------------------------------
Confidence            888899999999999999999999999999864  58999999988843                               


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                               +.++...|++||++++.|+++++.++++.    ||+||+|+||++.|++...
T Consensus       139 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  186 (250)
T 2fwm_X          139 ---------PRIGMSAYGASKAALKSLALSVGLELAGS----GVRCNVVSPGSTDTDMQRT  186 (250)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCC-------
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHhCcc----CCEEEEEECCcccCccccc
Confidence                     34456899999999999999999999987    7889999999999998654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.98  E-value=1.1e-31  Score=221.50  Aligned_cols=171  Identities=21%  Similarity=0.221  Sum_probs=148.2

Q ss_pred             CCCCCCcHHHHHHHHHHH---hcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHh--hcC
Q psy7994           1 VTGANKGIGYGIVKGLIQ---QFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEA--EHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~---~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~--~~~   64 (230)
                      ||||++|||++++++|++   + +..|++++|+.+.++...+++.           .+|++|+++++++++++.+  .++
T Consensus        11 VTGas~gIG~~ia~~l~~~~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g   89 (259)
T 1oaa_A           11 LTGASRGFGRALAPQLARLLSP-GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPE   89 (259)
T ss_dssp             ESSCSSHHHHHHHHHHHTTBCT-TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCT
T ss_pred             EeCCCChHHHHHHHHHHHhhcC-CCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccc
Confidence            799999999999999999   7 5688999999888777665542           2899999999999999988  778


Q ss_pred             CCc--EEEEccCCccc--cCCCC-CChhHHHHHHHHhhhhHHHHHHHhcccccCC----ceEEEecCCCccccccchHHH
Q psy7994          65 GVD--VLVNNAAIAFK--VNSSE-PFGSQALHTMRTNYFALIDVCDILFPLLRSH----GRVVNVSSSCGHLCHVTSEAL  135 (230)
Q Consensus        65 ~id--~lv~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~----g~ii~~sS~~~~~~~~~~~~~  135 (230)
                      ++|  +||||||....  .++.+ .+.++|++++++|+.|++.++++++|.|+++    |+||++||..++.        
T Consensus        90 ~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
T 1oaa_A           90 GLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--------  161 (259)
T ss_dssp             TCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS--------
T ss_pred             cCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC--------
Confidence            999  99999998643  34556 6889999999999999999999999999653    7999999998843        


Q ss_pred             HHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         136 KKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                                      +.++...|++||+++++|+++++.++..      |+||+|+||+++|+
T Consensus       162 --------------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~------i~vn~v~PG~v~T~  203 (259)
T 1oaa_A          162 --------------------------------PYKGWGLYCAGKAARDMLYQVLAAEEPS------VRVLSYAPGPLDND  203 (259)
T ss_dssp             --------------------------------CCTTCHHHHHHHHHHHHHHHHHHHHCTT------EEEEEEECCSBSSH
T ss_pred             --------------------------------CCCCccHHHHHHHHHHHHHHHHHhhCCC------ceEEEecCCCcCcc
Confidence                                            4456689999999999999999999852      88999999999999


Q ss_pred             CCC
Q psy7994         216 MSS  218 (230)
Q Consensus       216 ~~~  218 (230)
                      |.+
T Consensus       204 ~~~  206 (259)
T 1oaa_A          204 MQQ  206 (259)
T ss_dssp             HHH
T ss_pred             hHH
Confidence            854

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.98  E-value=1e-31  Score=224.34  Aligned_cols=175  Identities=18%  Similarity=0.211  Sum_probs=149.6

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCc--chhHHHHHhhh-----cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDA--SRGQEALEKLQ-----KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~--~~~~~~~~~~~-----~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+  +|||++++++|+++ +..|++++|+.  +.+++..+...     .+|++|+++++++++++.+.+++||+|||
T Consensus        31 VTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~  109 (280)
T 3nrc_A           31 ITGLLSNKSIAYGIAKAMHRE-GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVH  109 (280)
T ss_dssp             ECCCCSTTCHHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEE
T ss_pred             EECCCCCCCHHHHHHHHHHHc-CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79988  88999999999999 56788888887  33333333222     28999999999999999999999999999


Q ss_pred             ccCCccc----cCCCC-CChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          72 NAAIAFK----VNSSE-PFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        72 ~ag~~~~----~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |||....    .++.+ .+.+.|++++++|+.+++.++++++|.|+ +.++||++||..+..                  
T Consensus       110 nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~------------------  171 (280)
T 3nrc_A          110 SIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK------------------  171 (280)
T ss_dssp             CCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS------------------
T ss_pred             CCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc------------------
Confidence            9998754    33444 78899999999999999999999999987 458999999998843                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                            +.++...|++||+++++|+++++.++++.    ||+||+|+||+++|++.+..
T Consensus       172 ----------------------~~~~~~~Y~asKaal~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~  220 (280)
T 3nrc_A          172 ----------------------AMPSYNTMGVAKASLEATVRYTALALGED----GIKVNAVSAGPIKTLAASGI  220 (280)
T ss_dssp             ----------------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCCCCSGGGGC
T ss_pred             ----------------------CCCCchhhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEeeccccchhhhcC
Confidence                                  45566899999999999999999999987    78899999999999987654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.98  E-value=2.4e-31  Score=217.16  Aligned_cols=176  Identities=25%  Similarity=0.284  Sum_probs=155.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC------eEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG------IIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~------~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||++++++|+++|..      .|++++|+.++++...+++.         .+|++|+++++++++++.+.+++
T Consensus         7 ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (244)
T 2bd0_A            7 ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGH   86 (244)
T ss_dssp             EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSC
T ss_pred             EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999543      89999999887776665542         28999999999999999999999


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      +|+||||||.....++.+.+.+.|++++++|+.|++.++++++|.|+  +.++||++||..+..                
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------  150 (244)
T 2bd0_A           87 IDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK----------------  150 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred             CCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC----------------
Confidence            99999999998766777788999999999999999999999999985  358999999988843                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                              +.++...|++||+++++++++++.++...    |+++++|+||++.|++....
T Consensus       151 ------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~  199 (244)
T 2bd0_A          151 ------------------------AFRHSSIYCMSKFGQRGLVETMRLYARKC----NVRITDVQPGAVYTPMWGKV  199 (244)
T ss_dssp             ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCSTTTCCC
T ss_pred             ------------------------CCCCCchhHHHHHHHHHHHHHHHHHhhcc----CcEEEEEECCCccchhhhhc
Confidence                                    34456899999999999999999999887    79999999999999997654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.98  E-value=1.2e-31  Score=222.04  Aligned_cols=176  Identities=20%  Similarity=0.294  Sum_probs=150.6

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCcchh-HHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDASRG-QEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~~~~-~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      ||||+  +|||++++++|+++ +..|++++|+.... ++..+++.          .+|++|+++++++++++.+.+++||
T Consensus        25 ITGas~~~giG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id  103 (267)
T 3gdg_A           25 VTGASGPKGMGIEAARGCAEM-GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQID  103 (267)
T ss_dssp             ETTCCSSSSHHHHHHHHHHHT-SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCS
T ss_pred             EECCCCCCChHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCC
Confidence            79999  99999999999999 55777777765544 44444443          2899999999999999999999999


Q ss_pred             EEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      +||||||.....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+....                
T Consensus       104 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------  167 (267)
T 3gdg_A          104 AFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN----------------  167 (267)
T ss_dssp             EEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------------
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC----------------
Confidence            9999999988888888999999999999999999999999999864  5899999998885421                


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                            ..++...|++||+++++|+++++.++++.     ++||+|+||+++|++.+..
T Consensus       168 ----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-----i~v~~v~PG~v~t~~~~~~  215 (267)
T 3gdg_A          168 ----------------------FPQEQTSYNVAKAGCIHMARSLANEWRDF-----ARVNSISPGYIDTGLSDFV  215 (267)
T ss_dssp             ----------------------SSSCCHHHHHHHHHHHHHHHHHHHHTTTT-----CEEEEEEECCEECSCGGGS
T ss_pred             ----------------------CCCCCCcchHHHHHHHHHHHHHHHHhccC-----cEEEEEECCccccchhhhC
Confidence                                  11345899999999999999999999875     7799999999999997643

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.98  E-value=7.7e-33  Score=226.22  Aligned_cols=172  Identities=13%  Similarity=0.034  Sum_probs=150.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhc--CCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEH--GGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~--~~id~lv~~ag~~~~   78 (230)
                      ||||++|||++++++|+++ +..|++++|++++.+.. .....+|++|+++++++++++.+.+  +++|+||||||....
T Consensus        12 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~   89 (241)
T 1dhr_A           12 VYGGRGALGSRCVQAFRAR-NWWVASIDVVENEEASA-SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAG   89 (241)
T ss_dssp             EETTTSHHHHHHHHHHHTT-TCEEEEEESSCCTTSSE-EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred             EECCCcHHHHHHHHHHHhC-CCEEEEEeCChhhccCC-cEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCC
Confidence            7999999999999999999 56788889987654321 1233489999999999999999999  799999999998776


Q ss_pred             cCC-CCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          79 VNS-SEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        79 ~~~-~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      .++ .+.+.+.|++++++|+.+++.++++++|.|+++++||++||..+..                              
T Consensus        90 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------------------  139 (241)
T 1dhr_A           90 GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD------------------------------  139 (241)
T ss_dssp             BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------------------
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc------------------------------
Confidence            666 6788899999999999999999999999998789999999988843                              


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh--hhhccCCeEEEEecCCccccCCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS--QDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                +.++...|++||++++.|+++++.+++  +.    ||+||+|+||+++|+|.+
T Consensus       140 ----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~----gi~v~~v~PG~v~T~~~~  188 (241)
T 1dhr_A          140 ----------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPS----GAAAIAVLPVTLDTPMNR  188 (241)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCT----TCEEEEEEESCEECHHHH
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHHhccCCC----CeEEEEEecCcccCcccc
Confidence                      445568999999999999999999998  65    799999999999999854

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.98  E-value=1.1e-31  Score=220.14  Aligned_cols=171  Identities=22%  Similarity=0.294  Sum_probs=135.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+.+..      +|+++++++++++++    ++++|+||||||
T Consensus        19 VTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~li~~Ag   93 (249)
T 3f9i_A           19 ITGASSGIGSAIARLLHKL-GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK----TSNLDILVCNAG   93 (249)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHT----CSCCSEEEECCC
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHh----cCCCCEEEECCC
Confidence            7999999999999999999 56899999999888887766543      899999999888765    478999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ......+.+.+.++|++++++|+.|++.++++++|.|+  +.++||++||..+..                         
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------------------  148 (249)
T 3f9i_A           94 ITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA-------------------------  148 (249)
T ss_dssp             -------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC---------------------------
T ss_pred             CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc-------------------------
Confidence            98777777788899999999999999999999999985  458999999998844                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                     +.++...|++||+++++|+++++.+++..    ||+||+|+||++.|++.+..
T Consensus       149 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  197 (249)
T 3f9i_A          149 ---------------GNPGQANYCASKAGLIGMTKSLSYEVATR----GITVNAVAPGFIKSDMTDKL  197 (249)
T ss_dssp             ---------------CCSCSHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBC------C
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEecCccccCccccc
Confidence                           44566899999999999999999999987    78999999999999997654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.98  E-value=5.4e-32  Score=225.86  Aligned_cols=173  Identities=21%  Similarity=0.254  Sum_probs=150.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc-c
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNN-A   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~-a   73 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.      .+|++|+++++++++++ +.++++|++||| +
T Consensus        35 VTGas~GIG~aia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aa  112 (281)
T 3ppi_A           35 VSGGAGGLGEATVRRLHAD-GLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHG  112 (281)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCC
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccC
Confidence            7999999999999999999 5689999999988888776653      28999999999999999 888999999999 5


Q ss_pred             CCccccCC-----CCCChhHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCccccccchHHHHHHhh
Q psy7994          74 AIAFKVNS-----SEPFGSQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGHLCHVTSEALKKKLL  140 (230)
Q Consensus        74 g~~~~~~~-----~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~~~~~~~~~~~~~~~  140 (230)
                      |......+     .+.+.+.|++++++|+.+++.+++++++.|++        .++||++||..+..             
T Consensus       113 g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  179 (281)
T 3ppi_A          113 GFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE-------------  179 (281)
T ss_dssp             CCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS-------------
T ss_pred             cccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC-------------
Confidence            65443333     35778899999999999999999999998843        47999999998844             


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         141 HEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                                 +.++...|++||+|+++|+++++.++...    ||+||+|+||+++|++.+.
T Consensus       180 ---------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~  227 (281)
T 3ppi_A          180 ---------------------------GQIGQTAYAAAKAGVIGLTIAAARDLSSA----GIRVNTIAPGTMKTPIMES  227 (281)
T ss_dssp             ---------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHT
T ss_pred             ---------------------------CCCCCcccHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCcCCchhhhc
Confidence                                       45566899999999999999999999987    7999999999999998654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.97  E-value=1.1e-31  Score=219.14  Aligned_cols=174  Identities=22%  Similarity=0.290  Sum_probs=149.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH-hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~-~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||||++|||++++++|+++ +..|++++|++++..+... ....+|++| ++++++++++.+.++++|+||||||.....
T Consensus         7 VTGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~   84 (239)
T 2ekp_A            7 VTGGSRGIGRAIAEALVAR-GYRVAIASRNPEEAAQSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRK   84 (239)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            7999999999999999999 5688888998766332221 122389999 999999999999999999999999998777


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      ++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..++...                            
T Consensus        85 ~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------  136 (239)
T 2ekp_A           85 PALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG----------------------------  136 (239)
T ss_dssp             CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------------------
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC----------------------------
Confidence            7888899999999999999999999999999864  4899999998884411                            


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                +.++...|++||++++.++++++.++++.    ||+||+|+||++.|++..
T Consensus       137 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~  183 (239)
T 2ekp_A          137 ----------GPVPIPAYTTAKTALLGLTRALAKEWARL----GIRVNLLCPGYVETEFTL  183 (239)
T ss_dssp             ----------TTSCCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGH
T ss_pred             ----------CCCCCccHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEeCCccCchhh
Confidence                      11456899999999999999999999987    789999999999999853

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.97  E-value=5.9e-32  Score=230.00  Aligned_cols=173  Identities=20%  Similarity=0.272  Sum_probs=149.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE---------ecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT---------ARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~---------~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||+++++.|+++| ..|++.         +|+.++++...+++..      +|+++.++++++++++.+.+++
T Consensus        14 VTGas~GIG~~~a~~La~~G-a~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   92 (319)
T 1gz6_A           14 VTGAGGGLGRAYALAFAERG-ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGR   92 (319)
T ss_dssp             ETTTTSHHHHHHHHHHHHTT-CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSC
T ss_pred             EeCCCcHHHHHHHHHHHHCC-CEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999995 566664         4566677766666542      7999999999999999999999


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      +|+||||||+....++.+.+.+.|+.+|++|+.|+++++++++|.|++  .++||++||..+..                
T Consensus        93 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~----------------  156 (319)
T 1gz6_A           93 IDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY----------------  156 (319)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc----------------
Confidence            999999999977666777889999999999999999999999999864  48999999987743                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                              +.++...|++||+++..|+++++.++.+.    ||+||+|+||++ |++...
T Consensus       157 ------------------------~~~~~~~Y~aSK~a~~~~~~~la~el~~~----gI~vn~v~PG~~-t~~~~~  203 (319)
T 1gz6_A          157 ------------------------GNFGQANYSAAKLGLLGLANTLVIEGRKN----NIHCNTIAPNAG-SRMTET  203 (319)
T ss_dssp             ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEEECC-STTTGG
T ss_pred             ------------------------CCCCCHHHHHHHHHHHHHHHHHHHHhccc----CEEEEEEeCCCc-cccccc
Confidence                                    33456899999999999999999999987    799999999998 887654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.97  E-value=8.5e-33  Score=236.04  Aligned_cols=175  Identities=14%  Similarity=0.258  Sum_probs=144.5

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCc---------chhHHHHHhhh------------cccCCCH--H-----
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDA---------SRGQEALEKLQ------------KLDILDK--N-----   50 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~---------~~~~~~~~~~~------------~~D~s~~--~-----   50 (230)
                      |||+++  |||+++|++|+++ +..|+++++++         ++++.......            .+|+++.  +     
T Consensus         7 ITGas~~~GIG~aiA~~la~~-G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~   85 (329)
T 3lt0_A            7 IAGIGDTNGYGWGIAKELSKR-NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEE   85 (329)
T ss_dssp             EECCSSSSSHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGCCHH
T ss_pred             EECCCCCCchHHHHHHHHHHC-CCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhhhhh
Confidence            799985  9999999999999 56777665543         22221111111            1455555  4     


Q ss_pred             -------------HHHHHHHHHHhhcCCCcEEEEccCCc--cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCc
Q psy7994          51 -------------SIKALHDHLEAEHGGVDVLVNNAAIA--FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHG  115 (230)
Q Consensus        51 -------------~v~~~~~~~~~~~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g  115 (230)
                                   +++++++++.+.+++||+||||||+.  ...++.+.+.+.|+++|++|+.|+++++++++|.|+++|
T Consensus        86 ~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g  165 (329)
T 3lt0_A           86 TKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQS  165 (329)
T ss_dssp             HHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             hcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC
Confidence                         99999999999999999999999974  356778889999999999999999999999999998889


Q ss_pred             eEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCc-hhhHHHHHHHHHHHHHHHhhh
Q psy7994         116 RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS-AYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       116 ~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~~~~  194 (230)
                      +||++||..+..                                        +.++.. .|++||+|+.+|+++|+.|++
T Consensus       166 ~Iv~isS~~~~~----------------------------------------~~~~~~~~Y~asKaal~~~~~~la~el~  205 (329)
T 3lt0_A          166 SIISLTYHASQK----------------------------------------VVPGYGGGMSSAKAALESDTRVLAYHLG  205 (329)
T ss_dssp             EEEEEECGGGTS----------------------------------------CCTTCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCccccC----------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998843                                        444554 999999999999999999999


Q ss_pred             h-hhccCCeEEEEecCCccccCCCCCC
Q psy7994         195 Q-DAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       195 ~-~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                      + .    ||+||+|+||+|+|+|.+..
T Consensus       206 ~~~----gI~vn~v~PG~v~T~~~~~~  228 (329)
T 3lt0_A          206 RNY----NIRINTISAGPLKSRAATAI  228 (329)
T ss_dssp             HHH----CCEEEEEEECCCCCHHHHTC
T ss_pred             Ccc----CeEEEEEecceeechhHhhh
Confidence            8 7    78899999999999997654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=1.8e-31  Score=217.93  Aligned_cols=192  Identities=27%  Similarity=0.438  Sum_probs=150.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHh------hhcccCCCHHHHHHHHHHHHhhcC--CCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEK------LQKLDILDKNSIKALHDHLEAEHG--GVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~------~~~~D~s~~~~v~~~~~~~~~~~~--~id~lv~   71 (230)
                      ||||++|||++++++|+++|. ..|++++|+.++++...+.      +..+|++|+++++++++++.+.++  ++|+|||
T Consensus         8 ItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~   87 (250)
T 1yo6_A            8 VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLIN   87 (250)
T ss_dssp             ESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEE
T ss_pred             EecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence            799999999999999999953 7899999998877655332      123899999999999999999998  9999999


Q ss_pred             ccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-------------CceEEEecCCCccccccchHHHHH
Q psy7994          72 NAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-------------HGRVVNVSSSCGHLCHVTSEALKK  137 (230)
Q Consensus        72 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-------------~g~ii~~sS~~~~~~~~~~~~~~~  137 (230)
                      |||... ..++.+.+.+.|++++++|+.+++.++++++|.|++             .++||++||..+.......     
T Consensus        88 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  162 (250)
T 1yo6_A           88 NAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS-----  162 (250)
T ss_dssp             CCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS-----
T ss_pred             CCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc-----
Confidence            999876 677788889999999999999999999999998852             5899999998885421100     


Q ss_pred             HhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         138 KLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                                  ..+..+...|++||+++++++++++.++...    |+++++|+||+++|++.
T Consensus       163 ----------------------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~  210 (250)
T 1yo6_A          163 ----------------------------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDD----NVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             ----------------------------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEECCCC-----
T ss_pred             ----------------------------ccccCCccHHHHHHHHHHHHHHHHHHHhccC----CeEEEEEcCCceecCCC
Confidence                                        0011356899999999999999999999876    78899999999999998


Q ss_pred             CCCCCCCccccC
Q psy7994         218 SGKGPLTIDQDN  229 (230)
Q Consensus       218 ~~~~~~~~~~~a  229 (230)
                      +...+.+++++|
T Consensus       211 ~~~~~~~~~~~a  222 (250)
T 1yo6_A          211 GKNAALTVEQST  222 (250)
T ss_dssp             --------HHHH
T ss_pred             CCCCCCCHHHHH
Confidence            776667777765

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.97  E-value=1.3e-31  Score=216.55  Aligned_cols=158  Identities=21%  Similarity=0.238  Sum_probs=142.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc-ccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA-FKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~-~~~   79 (230)
                      ||||++|||++++++|+++ +..|++.+|+.+           +|++|+++++++++++    +++|+||||||.. ...
T Consensus        11 VTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~-----------~D~~~~~~v~~~~~~~----g~id~lv~nAg~~~~~~   74 (223)
T 3uce_A           11 VLGGTSGIGAELAKQLESE-HTIVHVASRQTG-----------LDISDEKSVYHYFETI----GAFDHLIVTAGSYAPAG   74 (223)
T ss_dssp             EETTTSHHHHHHHHHHCST-TEEEEEESGGGT-----------CCTTCHHHHHHHHHHH----CSEEEEEECCCCCCCCS
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEecCCcc-----------cCCCCHHHHHHHHHHh----CCCCEEEECCCCCCCCC
Confidence            7999999999999999999 668888888765           8999999999998865    8999999999987 567


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL  159 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (230)
                      ++.+.+.+.|++++++|+.|++.++++++|.|+++|+||++||..+..                                
T Consensus        75 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------------------------------  122 (223)
T 3uce_A           75 KVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK--------------------------------  122 (223)
T ss_dssp             CTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS--------------------------------
T ss_pred             CcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc--------------------------------
Confidence            788899999999999999999999999999999889999999998843                                


Q ss_pred             hhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         160 AQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                              +.++...|+++|+++++|+++++.|+.+      |+||+|+||+++|++.+..
T Consensus       123 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~------i~vn~v~PG~v~t~~~~~~  169 (223)
T 3uce_A          123 --------VVANTYVKAAINAAIEATTKVLAKELAP------IRVNAISPGLTKTEAYKGM  169 (223)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHTT------SEEEEEEECSBCSGGGTTS
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHhhcC------cEEEEEEeCCCcchhhhhc
Confidence                    4556689999999999999999999976      6699999999999987654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=2.2e-32  Score=222.72  Aligned_cols=172  Identities=15%  Similarity=0.070  Sum_probs=150.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhc--CCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEH--GGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~--~~id~lv~~ag~~~~   78 (230)
                      ||||++|||++++++|+++ +..|++++|++++.+.. .....+|++|+++++++++++.+.+  +++|+||||||....
T Consensus         8 ITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~   85 (236)
T 1ooe_A            8 VYGGKGALGSAILEFFKKN-GYTVLNIDLSANDQADS-NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAG   85 (236)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TEEEEEEESSCCTTSSE-EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEecCccccccc-cEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCC
Confidence            7999999999999999999 56888899987654321 1233489999999999999999999  799999999998776


Q ss_pred             cCC-CCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          79 VNS-SEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        79 ~~~-~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      .++ .+.+.+.|++++++|+.|++.++++++|.|+++++||++||..+..                              
T Consensus        86 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------------------------  135 (236)
T 1ooe_A           86 GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------------------------------  135 (236)
T ss_dssp             BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------------------
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc------------------------------
Confidence            666 6778899999999999999999999999998789999999988843                              


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh--hhhccCCeEEEEecCCccccCCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS--QDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                +.++...|++||+++++|+++++.+++  +.    ||+||+|+||+++|++.+
T Consensus       136 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~----gi~v~~v~Pg~v~t~~~~  184 (236)
T 1ooe_A          136 ----------PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPD----NSAVLTIMPVTLDTPMNR  184 (236)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCT----TCEEEEEEESCBCCHHHH
T ss_pred             ----------CCCCcHHHHHHHHHHHHHHHHHHHHhcccCC----CeEEEEEecCcccCcchh
Confidence                      445668999999999999999999997  65    799999999999999854

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=4.2e-32  Score=248.46  Aligned_cols=172  Identities=17%  Similarity=0.238  Sum_probs=149.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc---------chhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA---------SRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~---------~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||+++|+.|+++ +..|++.+++.         +.++...+++..      +|++|.++++++++++.+.||+
T Consensus        13 VTGas~GIG~a~A~~la~~-Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~~~~G~   91 (604)
T 2et6_A           13 ITGAGGGLGKYYSLEFAKL-GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAVKNFGT   91 (604)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHHHHHSC
T ss_pred             EeCCCcHHHHHHHHHHHHc-CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999 55677776654         566666666542      6899999999999999999999


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ||+||||||+....++.+.+.++|+++|++|+.|+++++++++|+|++  .|+||++||.++..                
T Consensus        92 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~----------------  155 (604)
T 2et6_A           92 VHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY----------------  155 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC----------------
Confidence            999999999987788889999999999999999999999999999964  48999999988843                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                              +.++...|++||+|+.+|+++|+.|++++    ||+||+|+|| +.|+|..
T Consensus       156 ------------------------~~~~~~~Y~asKaal~~lt~~la~El~~~----gIrVn~v~Pg-~~T~m~~  201 (604)
T 2et6_A          156 ------------------------GNFGQANYASAKSALLGFAETLAKEGAKY----NIKANAIAPL-ARSRMTE  201 (604)
T ss_dssp             ------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC-CCCHHHH
T ss_pred             ------------------------CCCCchHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEccC-CcCcccc
Confidence                                    44556899999999999999999999998    8999999998 6888754

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.97  E-value=3.2e-31  Score=218.81  Aligned_cols=174  Identities=21%  Similarity=0.295  Sum_probs=148.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.      .+|++|+++++++++++.+.++++|+||||||
T Consensus        17 VTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag   95 (265)
T 2o23_A           17 ITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAG   95 (265)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCc
Confidence            7999999999999999999 5688889999888777665542      38999999999999999999999999999999


Q ss_pred             CccccCCCC------CChhHHHHHHHHhhhhHHHHHHHhcccccC--------CceEEEecCCCccccccchHHHHHHhh
Q psy7994          75 IAFKVNSSE------PFGSQALHTMRTNYFALIDVCDILFPLLRS--------HGRVVNVSSSCGHLCHVTSEALKKKLL  140 (230)
Q Consensus        75 ~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--------~g~ii~~sS~~~~~~~~~~~~~~~~~~  140 (230)
                      .....++.+      .+.+.|++++++|+.+++.++++++|.|++        .++||++||..+..             
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-------------  162 (265)
T 2o23_A           96 IAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-------------  162 (265)
T ss_dssp             CCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-------------
T ss_pred             cCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC-------------
Confidence            875544432      678899999999999999999999999864        37999999987733             


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         141 HEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                                 +.++...|+++|++++.++++++.++...    ||+||+|+||+++|++.+.
T Consensus       163 ---------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  210 (265)
T 2o23_A          163 ---------------------------GQVGQAAYSASKGGIVGMTLPIARDLAPI----GIRVMTIAPGLFGTPLLTS  210 (265)
T ss_dssp             ---------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCC----
T ss_pred             ---------------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeccccCccccc
Confidence                                       33456899999999999999999999887    7999999999999998754

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.97  E-value=5.5e-32  Score=222.61  Aligned_cols=171  Identities=17%  Similarity=0.080  Sum_probs=150.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++++|+.++...   ....+|++|+++++++++++.+.++++|+||||||......
T Consensus        27 ITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~---~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~  102 (251)
T 3orf_A           27 VLGGSGALGAEVVKFFKSK-SWNTISIDFRENPNAD---HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGN  102 (251)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCCTTSS---EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCcccccc---cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCC
Confidence            7999999999999999999 5678899998875542   12248999999999999999999999999999999876555


Q ss_pred             -CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7994          81 -SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL  159 (230)
Q Consensus        81 -~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (230)
                       +.+.+.+.|++++++|+.|++.++++++|.|+++|+||++||..+..                                
T Consensus       103 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~--------------------------------  150 (251)
T 3orf_A          103 ASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN--------------------------------  150 (251)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS--------------------------------
T ss_pred             cccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc--------------------------------
Confidence             66778899999999999999999999999998889999999998843                                


Q ss_pred             hhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh--hhhccCCeEEEEecCCccccCCCCC
Q psy7994         160 AQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS--QDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                              +.++...|++||++++.++++++.+++  +.    ||+||+|+||+++|++.+.
T Consensus       151 --------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~----gi~v~~v~PG~v~t~~~~~  200 (251)
T 3orf_A          151 --------RTSGMIAYGATKAATHHIIKDLASENGGLPA----GSTSLGILPVTLDTPTNRK  200 (251)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHTSTTSSSCT----TCEEEEEEESCBCCHHHHH
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHhcccCC----CcEEEEEecCcCcCcchhh
Confidence                    455668999999999999999999986  55    7999999999999998643

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.97  E-value=3.3e-31  Score=219.08  Aligned_cols=188  Identities=26%  Similarity=0.401  Sum_probs=158.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC--CeEEEEecCcchhHHHHHh--------hhcccCCCHHHHHHHHHHHHhhcC--CCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD--GIIYLTARDASRGQEALEK--------LQKLDILDKNSIKALHDHLEAEHG--GVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~--~~vi~~~r~~~~~~~~~~~--------~~~~D~s~~~~v~~~~~~~~~~~~--~id~   68 (230)
                      ||||++|||++++++|+++|.  ..|++++|+.++++...+.        +..+|++|+++++++++++.+.++  ++|+
T Consensus        26 ITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~  105 (267)
T 1sny_A           26 ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNV  105 (267)
T ss_dssp             ESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSE
T ss_pred             EECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCCCccE
Confidence            799999999999999999953  7899999988765543221        112899999999999999999998  8999


Q ss_pred             EEEccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-------------CceEEEecCCCccccccchHH
Q psy7994          69 LVNNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-------------HGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        69 lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-------------~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      ||||||... ..++.+.+.+.|++++++|+.+++.++++++|.|++             .++||++||..+.....    
T Consensus       106 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----  181 (267)
T 1sny_A          106 LFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN----  181 (267)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC----
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCC----
Confidence            999999876 566677888999999999999999999999998853             47999999988854210    


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                                       +..+...|+++|+++++|+++++.++...    ||++++|+||+++|
T Consensus       182 ---------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t  224 (267)
T 1sny_A          182 ---------------------------------TDGGMYAYRTSKSALNAATKSLSVDLYPQ----RIMCVSLHPGWVKT  224 (267)
T ss_dssp             ---------------------------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEECCCSBCS
T ss_pred             ---------------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhcC----CcEEEEeCCcceec
Confidence                                             11245789999999999999999999887    78899999999999


Q ss_pred             CCCCCCCCCCccccC
Q psy7994         215 DMSSGKGPLTIDQDN  229 (230)
Q Consensus       215 ~~~~~~~~~~~~~~a  229 (230)
                      +|.....+.++++++
T Consensus       225 ~~~~~~~~~~~~~~a  239 (267)
T 1sny_A          225 DMGGSSAPLDVPTST  239 (267)
T ss_dssp             TTTCTTCSBCHHHHH
T ss_pred             CCCCCCCCCCHHHHH
Confidence            998877777777654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=3.4e-31  Score=242.44  Aligned_cols=169  Identities=20%  Similarity=0.330  Sum_probs=141.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|+.|+++| ..|++.++..  ++...+++..         +|++  ++.+++++++.+.+|+||+|||
T Consensus       327 VTGas~GIG~a~A~~la~~G-a~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iDiLVn  401 (604)
T 2et6_A          327 ITGAGAGLGKEYAKWFAKYG-AKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVN  401 (604)
T ss_dssp             ESSCSSHHHHHHHHHHHHTT-CEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECcchHHHHHHHHHHHHCC-CEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999994 5677776532  3333333321         4552  6678889999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||+....++.+.+.++|+++|++|+.|+++++++++|+|++  .|+||++||.++..                      
T Consensus       402 NAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~----------------------  459 (604)
T 2et6_A          402 NAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY----------------------  459 (604)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS----------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc----------------------
Confidence            999987788889999999999999999999999999999953  48999999988843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|++||+|+.+|+++|+.|++++    ||+||+|+||+ +|+|...
T Consensus       460 ------------------~~~~~~~Y~asKaal~~lt~~la~El~~~----gIrVn~v~PG~-~T~m~~~  506 (604)
T 2et6_A          460 ------------------GNFGQANYSSSKAGILGLSKTMAIEGAKN----NIKVNIVAPHA-ETAMTLS  506 (604)
T ss_dssp             ------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECC-CCCC---
T ss_pred             ------------------CCCCChhHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEcCCC-CCccccc
Confidence                              44566899999999999999999999998    89999999996 9998654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.97  E-value=2e-31  Score=220.86  Aligned_cols=170  Identities=24%  Similarity=0.242  Sum_probs=148.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||+++++.|+++ +..|++++|++++..  .-.+..+|++|+++++++++++.+.++++|+||||||.....+
T Consensus        13 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~   89 (264)
T 2dtx_A           13 VTGASMGIGRAIAERFVDE-GSKVIDLSIHDPGEA--KYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGK   89 (264)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESSCCCSC--SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEecCcccCC--ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            7999999999999999999 557888888766411  0122348999999999999999999999999999999987777


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+..                               
T Consensus        90 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------------------------  138 (264)
T 2dtx_A           90 IESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI-------------------------------  138 (264)
T ss_dssp             TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS-------------------------------
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc-------------------------------
Confidence            888899999999999999999999999999965  38999999988843                               


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                               +.++...|++||++++.|+++++.++.+.     |+||+|+||+++|++..
T Consensus       139 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-----i~vn~v~PG~v~t~~~~  184 (264)
T 2dtx_A          139 ---------ITKNASAYVTSKHAVIGLTKSIALDYAPL-----LRCNAVCPATIDTPLVR  184 (264)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHTTT-----SEEEEEEECSBCSHHHH
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHHhcCC-----cEEEEEEeCCCcCcchh
Confidence                     34556899999999999999999999875     67999999999998743

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.97  E-value=7.1e-31  Score=216.42  Aligned_cols=173  Identities=23%  Similarity=0.265  Sum_probs=151.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++| +.+.++...+++.         .+|++|+++++++++++.+.++++|+||
T Consensus        12 ITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   90 (261)
T 1gee_A           12 ITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMI   90 (261)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 567888888 7766666555442         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||||.....++.+.+.+.|++++++|+.+++.++++++|.|++   .++||++||..+..                    
T Consensus        91 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--------------------  150 (261)
T 1gee_A           91 NNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--------------------  150 (261)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--------------------
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC--------------------
Confidence            9999876666777888999999999999999999999999864   47999999987743                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|++||++++.++++++.+++..    ||++++|+||++.|++..
T Consensus       151 --------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~  197 (261)
T 1gee_A          151 --------------------PWPLFVHYAASKGGMKLMTETLALEYAPK----GIRVNNIGPGAINTPINA  197 (261)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSGGGH
T ss_pred             --------------------CCCCccHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCcCCchhh
Confidence                                34556899999999999999999999887    788999999999999753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.97  E-value=4.1e-31  Score=215.68  Aligned_cols=174  Identities=26%  Similarity=0.340  Sum_probs=150.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEE-EecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYL-TARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~-~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|. .|++ .+|++++++...+++.         .+|++|+++++++++++.+.++++|+||
T Consensus         6 VTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   84 (244)
T 1edo_A            6 VTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVV   84 (244)
T ss_dssp             ETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEE
T ss_pred             EeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799999999999999999955 5555 6888877766555442         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.+.|++++++|+.|++.++++++|.|+  +.++||++||..+..                     
T Consensus        85 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------------  143 (244)
T 1edo_A           85 NNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI---------------------  143 (244)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH---------------------
T ss_pred             ECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC---------------------
Confidence            999998766677788899999999999999999999999885  358999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|+++|++++.++++++.++...    |+++++|+||++.|++...
T Consensus       144 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  191 (244)
T 1edo_A          144 -------------------GNIGQANYAAAKAGVIGFSKTAAREGASR----NINVNVVCPGFIASDMTAK  191 (244)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHT
T ss_pred             -------------------CCCCCccchhhHHHHHHHHHHHHHHhhhc----CCEEEEEeeCccccchhhh
Confidence                               33456899999999999999999999876    7899999999999997543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.97  E-value=9.7e-31  Score=214.29  Aligned_cols=174  Identities=26%  Similarity=0.358  Sum_probs=153.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||++++++|+++ +..|++++|+++.++...+.+.        .+|++|+++++++++++.+.++++|+||||
T Consensus        11 VtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~   89 (251)
T 1zk4_A           11 ITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNN   89 (251)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999999 5678889999887776655442        289999999999999999999999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC---ceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~---g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||.....++.+.+.+.|++++++|+.|++.+++.++|.|++.   ++||++||..++.                      
T Consensus        90 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------------  147 (251)
T 1zk4_A           90 AGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----------------------  147 (251)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----------------------
T ss_pred             CCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc----------------------
Confidence            999877778888999999999999999999999999998643   7999999988743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh--hhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS--QDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|++||++++.++++++.++.  ..    |+++++|+||++.|++.+.
T Consensus       148 ------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~----~i~v~~v~Pg~v~t~~~~~  197 (251)
T 1zk4_A          148 ------------------GDPSLGAYNASKGAVRIMSKSAALDCALKDY----DVRVNTVHPGYIKTPLVDD  197 (251)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTC----SEEEEEEEECCBCCHHHHT
T ss_pred             ------------------CCCCCccchHHHHHHHHHHHHHHHHhcccCC----CeEEEEEeeCcCcchhhhh
Confidence                              344568999999999999999999987  54    7999999999999987543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.97  E-value=7.9e-31  Score=214.71  Aligned_cols=173  Identities=24%  Similarity=0.277  Sum_probs=152.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++          ..+|++|+++++++++++.+.++++|+||
T Consensus         7 ItGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   85 (250)
T 2cfc_A            7 VTGASSGNGLAIATRFLAR-GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLV   85 (250)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            7999999999999999999 468888999988777665554          12899999999999999999999999999


Q ss_pred             EccCCccccC---CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          71 NNAAIAFKVN---SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        71 ~~ag~~~~~~---~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||.....+   +.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                  
T Consensus        86 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------------  147 (250)
T 2cfc_A           86 NNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV------------------  147 (250)
T ss_dssp             ECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------
T ss_pred             ECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc------------------
Confidence            9999875554   667788999999999999999999999999863  48999999988743                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                            +.++...|+++|++++.++++++.++...    |+++++|+||++.|++..
T Consensus       148 ----------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~  194 (250)
T 2cfc_A          148 ----------------------AFPGRSAYTTSKGAVLQLTKSVAVDYAGS----GIRCNAVCPGMIETPMTQ  194 (250)
T ss_dssp             ----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSTTTH
T ss_pred             ----------------------CCCCchhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCcCccCccc
Confidence                                  34456899999999999999999999887    789999999999999864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=2.6e-31  Score=217.75  Aligned_cols=167  Identities=25%  Similarity=0.300  Sum_probs=143.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||++++++|+++ +..|++++|++++++... ++     ..+|++|++++++    +.+.++++|+||||||.
T Consensus        11 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~----~~~~~~~id~lv~~Ag~   84 (246)
T 2ag5_A           11 LTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQ----FANEVERLDVLFNVAGF   84 (246)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHH----HHHHCSCCSEEEECCCC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHH----HHHHhCCCCEEEECCcc
Confidence            7999999999999999999 568888999887665443 32     2389999999884    44557899999999999


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      ....++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                          
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------------  138 (246)
T 2ag5_A           85 VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV--------------------------  138 (246)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT--------------------------
T ss_pred             CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCc--------------------------
Confidence            87777778889999999999999999999999999853  58999999988843                          


Q ss_pred             HHHHHHhhcCCCcCCCC-CCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         154 NEFVELAQDGSHTKGGW-PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                    +.+ +...|++||++++.++++++.++++.    ||+||+|+||++.|++.
T Consensus       139 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~  185 (246)
T 2ag5_A          139 --------------KGVVNRCVYSTTKAAVIGLTKSVAADFIQQ----GIRCNCVCPGTVDTPSL  185 (246)
T ss_dssp             --------------BCCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCEECHHH
T ss_pred             --------------CCCCCCccHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeeCcCcCcch
Confidence                          223 45899999999999999999999987    78999999999999874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.97  E-value=8.2e-31  Score=216.75  Aligned_cols=174  Identities=25%  Similarity=0.307  Sum_probs=138.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhc-CCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEH-GGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~-~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.         .+|++++++++++++++.+.+ +++|+||
T Consensus        19 ITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li   97 (266)
T 1xq1_A           19 VTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILI   97 (266)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence            7999999999999999999 5688889999887776655542         289999999999999999999 8999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+..                     
T Consensus        98 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------------  156 (266)
T 1xq1_A           98 NNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV---------------------  156 (266)
T ss_dssp             EECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------------
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc---------------------
Confidence            9999877777788899999999999999999999999999853  48999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|+++|++++.++++++.++...    |+++++|+||++.|++...
T Consensus       157 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  204 (266)
T 1xq1_A          157 -------------------SASVGSIYSATKGALNQLARNLACEWASD----GIRANAVAPAVIATPLAEA  204 (266)
T ss_dssp             -----------------------CCHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEECCSCC------
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHHhHh----CcEEEEEeeCCCccchhhh
Confidence                               23345899999999999999999999887    7889999999999998654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.97  E-value=1.7e-31  Score=219.91  Aligned_cols=172  Identities=15%  Similarity=0.130  Sum_probs=148.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCC--CHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDIL--DKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s--~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+ +..  .++.  |+++++++++++.+.++++|+||||||..
T Consensus         6 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~   83 (254)
T 1zmt_A            6 VTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEA-FAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFA   83 (254)
T ss_dssp             ESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHH-HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-HHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCCcC
Confidence            7999999999999999999 5688899999887766544 432  1222  88899999999999999999999999987


Q ss_pred             -cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          77 -FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        77 -~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                       ...++.+.+.++|++++++|+.|++.++++++|.|++  .++||++||..+..                          
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------------  137 (254)
T 1zmt_A           84 PEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG--------------------------  137 (254)
T ss_dssp             CCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS--------------------------
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc--------------------------
Confidence             5667778899999999999999999999999999864  48999999998844                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc---------ccCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV---------NTDMSS  218 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v---------~t~~~~  218 (230)
                                    +.++...|++||+++++|+++++.++++.    ||+||+|+||++         +|++.+
T Consensus       138 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~~~~~~~~~~T~~~~  193 (254)
T 1zmt_A          138 --------------PWKELSTYTSARAGACTLANALSKELGEY----NIPVFAIGPNYLHSEDSPYFYPTEPWK  193 (254)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCCEEEEEESSBCCBTCCSSCBHHHHT
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCccccccccccCCCcccc
Confidence                          34456899999999999999999999987    788999999999         887654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.97  E-value=8.4e-31  Score=219.24  Aligned_cols=174  Identities=26%  Similarity=0.385  Sum_probs=150.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++ +..|++++|++++++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        49 ITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~  127 (285)
T 2c07_A           49 VTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVN  127 (285)
T ss_dssp             EESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             EECCCcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 5577778888887776665543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+..                      
T Consensus       128 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------------  185 (285)
T 2c07_A          128 NAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT----------------------  185 (285)
T ss_dssp             CCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------------
T ss_pred             CCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc----------------------
Confidence            999987777888899999999999999999999999998863  48999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.++...|+++|++++.++++++.++...    ||+|++|.||++.|++...
T Consensus       186 ------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  233 (285)
T 2c07_A          186 ------------------GNVGQANYSSSKAGVIGFTKSLAKELASR----NITVNAIAPGFISSDMTDK  233 (285)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCC-----
T ss_pred             ------------------CCCCCchHHHHHHHHHHHHHHHHHHHHHh----CcEEEEEEeCcEecCchhh
Confidence                              33456899999999999999999999887    7899999999999998654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.97  E-value=4.1e-31  Score=216.03  Aligned_cols=173  Identities=23%  Similarity=0.308  Sum_probs=132.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|+ .|+++ +|+++.++...+.+.         .+|++|+++++++++++.+.++++|+||
T Consensus        10 ItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   88 (247)
T 2hq1_A           10 VTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILV   88 (247)
T ss_dssp             ESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            799999999999999999954 66666 777777766554442         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.+.|++.+++|+.|++.++++++|.|++  .++||++||..+..                     
T Consensus        89 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------------  147 (247)
T 2hq1_A           89 NNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII---------------------  147 (247)
T ss_dssp             ECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------------
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc---------------------
Confidence            9999876666777888999999999999999999999998853  48999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|+++|++++.++++++.+++..    |+++|+|.||++.|++..
T Consensus       148 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~  194 (247)
T 2hq1_A          148 -------------------GNAGQANYAASKAGLIGFTKSIAKEFAAK----GIYCNAVAPGIIKTDMTD  194 (247)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred             -------------------CCCCCcHhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEEEEEEeccchh
Confidence                               33345899999999999999999999987    788999999999998754

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.1e-30  Score=215.51  Aligned_cols=174  Identities=25%  Similarity=0.302  Sum_probs=151.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----------------hcccCCCHHHHHHHHHHHHhhcC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----------------QKLDILDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----------------~~~D~s~~~~v~~~~~~~~~~~~   64 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++                ..+|++|+++++++++++.+.++
T Consensus        12 ITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (264)
T 2pd6_A           12 VTGAGSGIGRAVSVRLAGE-GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFS   90 (264)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            7999999999999999999 568889999988777665443                12899999999999999999999


Q ss_pred             CC-cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhh
Q psy7994          65 GV-DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLL  140 (230)
Q Consensus        65 ~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~  140 (230)
                      ++ |+||||||.....++.+.+.+.|++++++|+.|++.++++++|.|++   .++||++||..+..             
T Consensus        91 ~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  157 (264)
T 2pd6_A           91 RPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-------------  157 (264)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-------------
T ss_pred             CCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc-------------
Confidence            99 99999999987677777889999999999999999999999998864   57999999987733             


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         141 HEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                                 +.++...|++||++++.++++++.++...    |+++++|+||++.|++...
T Consensus       158 ---------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  205 (264)
T 2pd6_A          158 ---------------------------GNVGQTNYAASKAGVIGLTQTAARELGRH----GIRCNSVLPGFIATPMTQK  205 (264)
T ss_dssp             ---------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSCC---
T ss_pred             ---------------------------CCCCChhhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeecccccchhh
Confidence                                       34456899999999999999999999887    7899999999999998654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.97  E-value=5.8e-31  Score=220.85  Aligned_cols=182  Identities=27%  Similarity=0.382  Sum_probs=147.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.      .+|++|+++++++++++    +++|+||||||
T Consensus        21 VTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----~~iD~lv~nAg   95 (291)
T 3rd5_A           21 ITGANSGLGAVTARELARR-GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV----SGADVLINNAG   95 (291)
T ss_dssp             EECCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC----CCEEEEEECCC
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc----CCCCEEEECCc
Confidence            7999999999999999999 5689999999998888776653      28999999999998876    78999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      ...+  ..+.+.+.|++++++|+.|++.++++++|.|++  +||++||.+++.........                   
T Consensus        96 ~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--riv~isS~~~~~~~~~~~~~-------------------  152 (291)
T 3rd5_A           96 IMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD--RVVTVSSMAHWPGRINLEDL-------------------  152 (291)
T ss_dssp             CCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE--EEEEECCGGGTTCCCCSSCT-------------------
T ss_pred             CCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--heeEeechhhccCCCCcccc-------------------
Confidence            8643  355778899999999999999999999999976  89999999886432211000                   


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                              .....+..+...|++||++++.|+++++.++.+.+.+  |+||+|+||+|+|+|.+..
T Consensus       153 --------~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~--i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          153 --------NWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSP--LRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             --------TCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEECCSGGGSCC----
T ss_pred             --------cccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCC--EEEEEeeCCCCcccccccc
Confidence                    0001234456899999999999999999999987322  9999999999999998764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.97  E-value=3e-30  Score=212.41  Aligned_cols=175  Identities=23%  Similarity=0.380  Sum_probs=151.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        18 ItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   96 (260)
T 3awd_A           18 VTGGAQNIGLACVTALAEA-GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVA   96 (260)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999 5688899999877766555442         28999999999999999999999999999


Q ss_pred             ccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||... ..++.+.+.+.|++++++|+.+++.++++++|.|++  .++||++||..+....                   
T Consensus        97 ~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------------  157 (260)
T 3awd_A           97 CAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN-------------------  157 (260)
T ss_dssp             CCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------------------
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC-------------------
Confidence            999876 566778889999999999999999999999998853  5899999998874311                   


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +..+...|+++|++++.++++++.++.+.    |+++++|.||++.|++.+
T Consensus       158 -------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~----gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          158 -------------------RPQQQAAYNASKAGVHQYIRSLAAEWAPH----GIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             -------------------SSSCCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTTH
T ss_pred             -------------------CCCCccccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeeeeccchhh
Confidence                               11223789999999999999999999887    789999999999999865

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.97  E-value=2.9e-31  Score=230.95  Aligned_cols=177  Identities=15%  Similarity=-0.004  Sum_probs=142.6

Q ss_pred             CCCCCCcHHHHHHHHHHH-hcCCeEEEEecCcchhHH------------HHHhhh---------cccCCCHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQ-QFDGIIYLTARDASRGQE------------ALEKLQ---------KLDILDKNSIKALHDH   58 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~-~g~~~vi~~~r~~~~~~~------------~~~~~~---------~~D~s~~~~v~~~~~~   58 (230)
                      ||||++|||+++|+.|++ + +..|++++|+.+.++.            ..+.+.         .+|++|++++++++++
T Consensus        66 VTGASsGIG~AiA~~LA~~~-GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~  144 (422)
T 3s8m_A           66 VIGASSGYGLASRITAAFGF-GADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIEL  144 (422)
T ss_dssp             EESCSSHHHHHHHHHHHHHH-CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHH
T ss_pred             EECCChHHHHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            799999999999999999 8 5677788887654321            112221         2899999999999999


Q ss_pred             HHhhc-CCCcEEEEccCCc-------------cccCC---------------------CCCChhHHHHHHHHhhhhHH-H
Q psy7994          59 LEAEH-GGVDVLVNNAAIA-------------FKVNS---------------------SEPFGSQALHTMRTNYFALI-D  102 (230)
Q Consensus        59 ~~~~~-~~id~lv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~g~~-~  102 (230)
                      +.+.+ |+||+||||||..             ...++                     .+.+.++|++++++|..+.| +
T Consensus       145 i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~  224 (422)
T 3s8m_A          145 IKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWEL  224 (422)
T ss_dssp             HHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHH
T ss_pred             HHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHH
Confidence            99999 9999999999972             22333                     35788999999999999998 7


Q ss_pred             HHHHhcc-cc-cCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHH
Q psy7994         103 VCDILFP-LL-RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKL  180 (230)
Q Consensus       103 l~~~~~~-~l-~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  180 (230)
                      +++++++ .| +++|+||++||+++.....                                      ......|++||+
T Consensus       225 ~~~a~~~~~m~~~gG~IVniSSi~g~~~~p--------------------------------------~~~~~aY~ASKa  266 (422)
T 3s8m_A          225 WIDALEGAGVLADGARSVAFSYIGTEITWP--------------------------------------IYWHGALGKAKV  266 (422)
T ss_dssp             HHHHHHHTTCEEEEEEEEEEEECCCGGGHH--------------------------------------HHTSHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCEEEEEeCchhhccCC--------------------------------------CccchHHHHHHH
Confidence            8888764 34 3458999999999854211                                      001278999999


Q ss_pred             HHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         181 GVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       181 a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                      |+.+|+++|+.|+++.    |||||+|+||++.|+++...
T Consensus       267 Al~~lTrsLA~Ela~~----GIRVNaVaPG~i~T~~~~~i  302 (422)
T 3s8m_A          267 DLDRTAQRLNARLAKH----GGGANVAVLKSVVTQASAAI  302 (422)
T ss_dssp             HHHHHHHHHHHHHHTT----TCEEEEEEECCCCCTTGGGS
T ss_pred             HHHHHHHHHHHHhCcc----CEEEEEEEcCCCcChhhhcC
Confidence            9999999999999998    78899999999999998654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.97  E-value=8.7e-31  Score=232.44  Aligned_cols=175  Identities=27%  Similarity=0.381  Sum_probs=147.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc--hhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCC-CcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS--RGQEALEKL----QKLDILDKNSIKALHDHLEAEHGG-VDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~--~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~-id~lv~~a   73 (230)
                      ||||++|||++++++|+++| ..|++++|+..  .+++..+.+    ..+|++|+++++++++++.+.+++ ||+|||||
T Consensus       218 VTGgsgGIG~aiA~~La~~G-a~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nA  296 (454)
T 3u0b_A          218 VTGAARGIGATIAEVFARDG-ATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNA  296 (454)
T ss_dssp             ESSCSSHHHHHHHHHHHHTT-CEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECC
T ss_pred             EeCCchHHHHHHHHHHHHCC-CEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECC
Confidence            79999999999999999994 57888888643  233333332    239999999999999999999986 99999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |+..+..+.+.+.+.|+++|++|+.|++++++++++.|+  +.++||++||..+..                        
T Consensus       297 Gv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~------------------------  352 (454)
T 3u0b_A          297 GITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA------------------------  352 (454)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH------------------------
T ss_pred             cccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC------------------------
Confidence            998888888899999999999999999999999999886  448999999988843                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                      +.+++..|+++|+++++|+++++.+++..    ||+||+|+||+++|+|....
T Consensus       353 ----------------g~~g~~~YaasKaal~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~  401 (454)
T 3u0b_A          353 ----------------GNRGQTNYATTKAGMIGLAEALAPVLADK----GITINAVAPGFIETKMTEAI  401 (454)
T ss_dssp             ----------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSBCC------
T ss_pred             ----------------CCCCCHHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEcCcccChhhhhc
Confidence                            45567999999999999999999999987    78899999999999998654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.4e-30  Score=216.47  Aligned_cols=176  Identities=24%  Similarity=0.324  Sum_probs=151.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++++.|+++ +..|++++|+++.++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        36 ITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~  114 (272)
T 1yb1_A           36 ITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVN  114 (272)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEE
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEE
Confidence            7999999999999999999 5678899999887776655543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+...                     
T Consensus       115 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------  173 (272)
T 1yb1_A          115 NAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS---------------------  173 (272)
T ss_dssp             CCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC---------------------
T ss_pred             CCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC---------------------
Confidence            999877666777788999999999999999999999999864  479999999988542                     


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         .++...|+++|++++.++++++.++...+.. ||+|++|.||+++|++.+
T Consensus       174 -------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~-gi~v~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          174 -------------------VPFLLAYCSSKFAAVGFHKTLTDELAALQIT-GVKTTCLCPNFVNTGFIK  222 (272)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-TEEEEEEEETHHHHCSTT
T ss_pred             -------------------CCCchhHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCCcccCCccc
Confidence                               1233789999999999999999999743222 799999999999999865

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=2.1e-30  Score=216.00  Aligned_cols=174  Identities=26%  Similarity=0.351  Sum_probs=151.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++++.|+++ +..|++++|+.++++...+++.           .+|++|+++++++++++.+.++++|+|
T Consensus        37 VTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~v  115 (279)
T 1xg5_A           37 VTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDIC  115 (279)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            7999999999999999999 5688889999887776654432           289999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC----ceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~----g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |||||.....++.+.+.+.|++++++|+.+++.+++.+++.|++.    ++||++||..+...                 
T Consensus       116 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~-----------------  178 (279)
T 1xg5_A          116 INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-----------------  178 (279)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC-----------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc-----------------
Confidence            999999877778888999999999999999999999999998632    79999999887421                 


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh--hhhccCCeEEEEecCCccccCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS--QDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                           .+.++...|+++|++++.|+++++.++.  ..    ||++|+|+||++.|++.
T Consensus       179 ---------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~----~i~v~~v~Pg~v~t~~~  227 (279)
T 1xg5_A          179 ---------------------LPLSVTHFYSATKYAVTALTEGLRQELREAQT----HIRATCISPGVVETQFA  227 (279)
T ss_dssp             ---------------------CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTC----CCEEEEEEESCBCSSHH
T ss_pred             ---------------------CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCC----CeEEEEEecCcccchhh
Confidence                                 1233457899999999999999999998  44    79999999999999983

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.97  E-value=9.4e-31  Score=213.50  Aligned_cols=173  Identities=26%  Similarity=0.371  Sum_probs=150.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhh----------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKL----------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~----------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++| ..|+++ +|++++++...+++          ..+|++|+++++++++++.+.++++|+|
T Consensus         6 ITGasggiG~~~a~~l~~~G-~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   84 (245)
T 2ph3_A            6 ITGASRGIGRAIALRLAEDG-FALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTL   84 (245)
T ss_dssp             ETTTTSHHHHHHHHHHHTTT-CEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEE
T ss_pred             EeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            79999999999999999995 456665 88887776654433          3479999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||.....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+..                    
T Consensus        85 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------------  144 (245)
T 2ph3_A           85 VNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL--------------------  144 (245)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--------------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc--------------------
Confidence            99999877667777889999999999999999999999999864  48999999987743                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|+++|++++.++++++.++...    |+++++|.||++.|++.+
T Consensus       145 --------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~  191 (245)
T 2ph3_A          145 --------------------GNPGQANYVASKAGLIGFTRAVAKEYAQR----GITVNAVAPGFIETEMTE  191 (245)
T ss_dssp             --------------------CCSSBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred             --------------------CCCCCcchHHHHHHHHHHHHHHHHHHHHc----CeEEEEEEEEeecCcchh
Confidence                                33456899999999999999999999887    788999999999998754

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.97  E-value=1.7e-30  Score=212.29  Aligned_cols=174  Identities=26%  Similarity=0.379  Sum_probs=151.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.          .+|++|+++++++++++.+.++++|+||
T Consensus        12 VtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   90 (248)
T 2pnf_A           12 VTGSTRGIGRAIAEKLASA-GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILV   90 (248)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEE
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999999 5688899998877766554432          2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++.+++|+.|++.++++++|.|++  .++||++||..+..                     
T Consensus        91 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------------  149 (248)
T 2pnf_A           91 NNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT---------------------  149 (248)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH---------------------
T ss_pred             ECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC---------------------
Confidence            9999876666677888999999999999999999999998863  48999999976633                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|+++|++++.++++++.++...    |+++++|.||++.|++...
T Consensus       150 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~v~Pg~v~t~~~~~  197 (248)
T 2pnf_A          150 -------------------GNVGQVNYSTTKAGLIGFTKSLAKELAPR----NVLVNAVAPGFIETDMTAV  197 (248)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGGG
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeceecCchhhh
Confidence                               33456899999999999999999999887    7889999999999998643

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.97  E-value=1.4e-30  Score=214.79  Aligned_cols=181  Identities=23%  Similarity=0.363  Sum_probs=151.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++.....+++.          .+|++|+++++++++++.+.++++|+||
T Consensus        19 ITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   97 (265)
T 1h5q_A           19 VTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLI   97 (265)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred             EECCCchHHHHHHHHHHHC-CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999999 5688888997666554443331          2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||||.....++.+.+.+.|++++++|+.|++.++++++|.|++   .++||++||..+.......               
T Consensus        98 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------------  162 (265)
T 1h5q_A           98 ANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS---------------  162 (265)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE---------------
T ss_pred             ECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc---------------
Confidence            9999977677777889999999999999999999999998853   3899999998875422110               


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        ..+..+...|++||++++.++++++.++...    ||++++|+||++.|++.+.
T Consensus       163 ------------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~  212 (265)
T 1h5q_A          163 ------------------LNGSLTQVFYNSSKAACSNLVKGLAAEWASA----GIRVNALSPGYVNTDQTAH  212 (265)
T ss_dssp             ------------------TTEECSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGGG
T ss_pred             ------------------ccccccccccHHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCccccccccc
Confidence                              0012235899999999999999999999887    7899999999999998654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.97  E-value=5.9e-31  Score=221.32  Aligned_cols=173  Identities=13%  Similarity=0.201  Sum_probs=140.9

Q ss_pred             CCCCC--CcHHHHHHHHHHHhcCCeEEEEecCc-----------chhHHHHHhh-----------hcc--------cCC-
Q psy7994           1 VTGAN--KGIGYGIVKGLIQQFDGIIYLTARDA-----------SRGQEALEKL-----------QKL--------DIL-   47 (230)
Q Consensus         1 ItG~s--~giG~~~a~~la~~g~~~vi~~~r~~-----------~~~~~~~~~~-----------~~~--------D~s-   47 (230)
                      ||||+  +|||+++++.|+++| ..|++++|++           ++++.. +++           ..+        |++ 
T Consensus        13 VTGas~~~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dv~~   90 (297)
T 1d7o_A           13 IAGIADDNGYGWAVAKSLAAAG-AEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFDNPEDVPE   90 (297)
T ss_dssp             EECCSSSSSHHHHHHHHHHHTT-CEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCCSGGGSCH
T ss_pred             EECCCCCCChHHHHHHHHHHCC-CeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceeccchhhhhh
Confidence            79999  999999999999994 5677776542           122211 111           001        232 


Q ss_pred             ---C--------HHHHHHHHHHHHhhcCCCcEEEEccCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC
Q psy7994          48 ---D--------KNSIKALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH  114 (230)
Q Consensus        48 ---~--------~~~v~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~  114 (230)
                         |        +++++++++++.+.++++|+||||||...  ..++.+.+.++|++++++|+.|+++++++++|.|+++
T Consensus        91 Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~  170 (297)
T 1d7o_A           91 DVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG  170 (297)
T ss_dssp             HHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred             hhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccC
Confidence               2        67899999999999999999999999753  4566778899999999999999999999999999877


Q ss_pred             ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCC-chhhHHHHHHHHHHHHHHHhh
Q psy7994         115 GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHALL  193 (230)
Q Consensus       115 g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~  193 (230)
                      ++||++||..+..                                        +.++. ..|++||+++++|+++++.|+
T Consensus       171 g~iv~isS~~~~~----------------------------------------~~~~~~~~Y~asKaa~~~~~~~la~e~  210 (297)
T 1d7o_A          171 GASISLTYIASER----------------------------------------IIPGYGGGMSSAKAALESDTRVLAFEA  210 (297)
T ss_dssp             EEEEEEECGGGTS----------------------------------------CCTTCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecccccc----------------------------------------CCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence            9999999988743                                        33344 589999999999999999999


Q ss_pred             hh-hhccCCeEEEEecCCccccCCCCC
Q psy7994         194 SQ-DAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       194 ~~-~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                      .+ .    ||+||+|+||+++|+|...
T Consensus       211 ~~~~----gi~vn~v~PG~v~T~~~~~  233 (297)
T 1d7o_A          211 GRKQ----NIRVNTISAGPLGSRAAKA  233 (297)
T ss_dssp             HHHH----CCEEEEEEECCCBCCCSSC
T ss_pred             Cccc----CcEEEEEeccccccchhhh
Confidence            85 6    7899999999999999764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=9.5e-30  Score=211.36  Aligned_cols=175  Identities=21%  Similarity=0.283  Sum_probs=151.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||++++++|+++ +..|++++|+.+..+...+++.        .+|++|+++++++++++.+.++++|+||||
T Consensus        21 ITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~   99 (278)
T 2bgk_A           21 ITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGN   99 (278)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            7999999999999999999 5688888998877666554432        289999999999999999999999999999


Q ss_pred             cCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          73 AAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        73 ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||...  +.++.+.+.+.|++++++|+.+++.++++++|.|++  .++||++||..++.                     
T Consensus       100 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------------  158 (278)
T 2bgk_A          100 VGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT---------------------  158 (278)
T ss_dssp             CCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC---------------------
T ss_pred             CcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccC---------------------
Confidence            99864  256677888999999999999999999999999864  48999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCC-CCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGW-PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.+ +...|+++|++++.++++++.++...    ||++++|+||++.|++....
T Consensus       159 -------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~  208 (278)
T 2bgk_A          159 -------------------AGEGVSHVYTATKHAVLGLTTSLCTELGEY----GIRVNCVSPYIVASPLLTDV  208 (278)
T ss_dssp             -------------------CCTTSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCCSCCCCTTS
T ss_pred             -------------------CCCCCCcchHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeceecchhhhhh
Confidence                               222 45789999999999999999999887    78899999999999987653

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.97  E-value=1.1e-30  Score=222.91  Aligned_cols=173  Identities=22%  Similarity=0.259  Sum_probs=140.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch---hHHHHHhh------------hcccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR---GQEALEKL------------QKLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~---~~~~~~~~------------~~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||++++++|+++|. .|+++.|+...   .....+.+            ..+|++|+++++++++++.  +++
T Consensus         7 VTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~g~   83 (327)
T 1jtv_A            7 ITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--EGR   83 (327)
T ss_dssp             ESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--TSC
T ss_pred             EECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh--cCC
Confidence            799999999999999999955 45555554433   23322221            1289999999999999883  589


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      +|+||||||.....++.+.+.+.|+++|++|+.|++.++++++|.|+  +.++||++||..+..                
T Consensus        84 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~----------------  147 (327)
T 1jtv_A           84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM----------------  147 (327)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS----------------
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc----------------
Confidence            99999999987667777788999999999999999999999999985  358999999998844                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                              +.++...|++||+++++|+++++.++...    ||+||+|+||+|+|+|....
T Consensus       148 ------------------------~~~~~~~Y~aSK~a~~~~~~~la~el~~~----gI~v~~v~PG~v~T~~~~~~  196 (327)
T 1jtv_A          148 ------------------------GLPFNDVYCASKFALEGLCESLAVLLLPF----GVHLSLIECGPVHTAFMEKV  196 (327)
T ss_dssp             ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCC------
T ss_pred             ------------------------CCCCChHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEeCcccChHHhhh
Confidence                                    33456899999999999999999999987    79999999999999997653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.97  E-value=2.7e-30  Score=212.13  Aligned_cols=175  Identities=23%  Similarity=0.319  Sum_probs=150.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+ +++++...+++.         .+|++|+++++++++++.+.++++|+||
T Consensus        12 VTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi   90 (258)
T 3afn_B           12 ITGSSQGIGLATARLFARA-GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLI   90 (258)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 5678888898 777776655542         2899999999999999999999999999


Q ss_pred             EccCC-ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----C---ceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          71 NNAAI-AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----H---GRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        71 ~~ag~-~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~---g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                      ||||. ....++.+.+.+.|++++++|+.|++.++++++|.|++    .   ++||++||..+...              
T Consensus        91 ~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  156 (258)
T 3afn_B           91 NNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG--------------  156 (258)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC--------------
T ss_pred             ECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC--------------
Confidence            99998 55566677888999999999999999999999998852    2   79999999876320              


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                               +.++...|++||++++.++++++.++++.    ||++|+|+||++.|++...
T Consensus       157 -------------------------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~----gi~v~~v~Pg~v~t~~~~~  204 (258)
T 3afn_B          157 -------------------------GGPGAGLYGAAKAFLHNVHKNWVDFHTKD----GVRFNIVSPGTVDTAFHAD  204 (258)
T ss_dssp             -------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSGGGTT
T ss_pred             -------------------------CCCCchHHHHHHHHHHHHHHHHHHhhccc----CeEEEEEeCCCcccccccc
Confidence                                     23355899999999999999999999887    7889999999999998654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.97  E-value=1.9e-30  Score=224.15  Aligned_cols=177  Identities=12%  Similarity=-0.051  Sum_probs=143.0

Q ss_pred             CCCCCCcHHHHHHHHHHH-hcCCeEEEEecCcchhH------------HHHHhhh---------cccCCCHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQ-QFDGIIYLTARDASRGQ------------EALEKLQ---------KLDILDKNSIKALHDH   58 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~-~g~~~vi~~~r~~~~~~------------~~~~~~~---------~~D~s~~~~v~~~~~~   58 (230)
                      ||||++|||+++++.|++ + +..|++++++.+..+            ...+.+.         .+|++|++++++++++
T Consensus        52 VTGas~GIG~AiA~~LA~g~-GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~  130 (405)
T 3zu3_A           52 VIGASTGYGLAARITAAFGC-GADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDA  130 (405)
T ss_dssp             EESCSSHHHHHHHHHHHHHH-CCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHH
T ss_pred             EeCcchHHHHHHHHHHHHhc-CCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            799999999999999999 8 567777777654321            1111221         2899999999999999


Q ss_pred             HHhhcCCCcEEEEccCCc-------------cccCC---------------------CCCChhHHHHHHHHhhhhHH-HH
Q psy7994          59 LEAEHGGVDVLVNNAAIA-------------FKVNS---------------------SEPFGSQALHTMRTNYFALI-DV  103 (230)
Q Consensus        59 ~~~~~~~id~lv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~g~~-~l  103 (230)
                      +.+.+|+||+||||||..             ...++                     .+.+.++|++++++|..+.| ++
T Consensus       131 i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~  210 (405)
T 3zu3_A          131 IKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMW  210 (405)
T ss_dssp             HHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHH
T ss_pred             HHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHHHH
Confidence            999999999999999984             22344                     66789999999999999998 78


Q ss_pred             HHHhcc-cc-cCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCC--chhhHHH
Q psy7994         104 CDILFP-LL-RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN--SAYAATK  179 (230)
Q Consensus       104 ~~~~~~-~l-~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK  179 (230)
                      ++++++ .| +++|+||++||+++..                                        +.+.+  ..|++||
T Consensus       211 ~~~~~~~~m~~~gG~IVniSSi~~~~----------------------------------------~~p~~~~~aY~AaK  250 (405)
T 3zu3_A          211 IDALLDAGVLAEGAQTTAFTYLGEKI----------------------------------------THDIYWNGSIGAAK  250 (405)
T ss_dssp             HHHHHHHTCEEEEEEEEEEECCCCGG----------------------------------------GTTTTTTSHHHHHH
T ss_pred             HHHHHHHhhhhCCcEEEEEeCchhhC----------------------------------------cCCCccchHHHHHH
Confidence            887764 44 3458999999999844                                        33344  8999999


Q ss_pred             HHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         180 LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       180 ~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                      +++.+|+++||.|+++.   .|||||+|+||++.|+++...+
T Consensus       251 aal~~ltrsLA~Ela~~---~GIRVNaVaPG~i~T~~s~~ip  289 (405)
T 3zu3_A          251 KDLDQKVLAIRESLAAH---GGGDARVSVLKAVVSQASSAIP  289 (405)
T ss_dssp             HHHHHHHHHHHHHHHTT---TSCEEEEEECCCCCCHHHHTST
T ss_pred             HHHHHHHHHHHHHhCcc---cCeEEEEEEeCCCcCchhhcCC
Confidence            99999999999999985   1477999999999999876543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.97  E-value=1.1e-30  Score=239.66  Aligned_cols=174  Identities=20%  Similarity=0.273  Sum_probs=136.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec---------CcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR---------DASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r---------~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||+++|+.|+++ +..|++.+|         +.+.++...+++..      +|++|.++++++++++.+.+++
T Consensus        24 VTGas~GIG~aiA~~La~~-Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~  102 (613)
T 3oml_A           24 VTGAGAGLGREYALLFAER-GAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGR  102 (613)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--------
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHHHHCCC
Confidence            7999999999999999999 567777766         66667766666643      7999999999999999999999


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ||+||||||+....++.+.+.+.|++++++|+.|+++++++++|.|+++  |+||++||.++..                
T Consensus       103 iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~----------------  166 (613)
T 3oml_A          103 VDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY----------------  166 (613)
T ss_dssp             --CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH----------------
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC----------------
Confidence            9999999999888888899999999999999999999999999999754  8999999988743                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                              +.++...|++||+|+.+|+++++.|+++.    ||+||+|+||++ |+|....
T Consensus       167 ------------------------~~~~~~~Y~asKaal~~lt~~la~e~~~~----gI~vn~v~Pg~~-t~~~~~~  214 (613)
T 3oml_A          167 ------------------------GNFGQVNYTAAKMGLIGLANTVAIEGARN----NVLCNVIVPTAA-SRMTEGI  214 (613)
T ss_dssp             ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC-------CCC
T ss_pred             ------------------------CCCCChHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEECCCC-Chhhhhc
Confidence                                    44566899999999999999999999987    799999999975 6665543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.97  E-value=2.8e-30  Score=212.34  Aligned_cols=167  Identities=19%  Similarity=0.219  Sum_probs=141.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc--hhHHHHHhh-------hcccCCCH-HHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS--RGQEALEKL-------QKLDILDK-NSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~--~~~~~~~~~-------~~~D~s~~-~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++|..+|++++|+.+  .+++..+..       ..+|++|+ ++++++++++.+.++++|+||
T Consensus        10 VtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv   89 (254)
T 1sby_A           10 FVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILI   89 (254)
T ss_dssp             EETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999996656888888763  333332221       12899998 999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||||..        +.+.|++++++|+.|++.++++++|.|++     .++||++||..++.                  
T Consensus        90 ~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------  143 (254)
T 1sby_A           90 NGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN------------------  143 (254)
T ss_dssp             ECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------------------
T ss_pred             ECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc------------------
Confidence            999973        45779999999999999999999998854     47999999988843                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                            +.++...|++||+++++++++++.++...    ||+||+|+||+++|++.+.
T Consensus       144 ----------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~----gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          144 ----------------------AIHQVPVYSASKAAVVSFTNSLAKLAPIT----GVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             ----------------------CCTTSHHHHHHHHHHHHHHHHHHHHHHHH----SEEEEEEEECSEESHHHHS
T ss_pred             ----------------------CCCCchHHHHHHHHHHHHHHHHHHHhccC----CeEEEEEecCCccCccccc
Confidence                                  34456899999999999999999998876    7999999999999998643

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.97  E-value=5.4e-30  Score=213.34  Aligned_cols=174  Identities=20%  Similarity=0.266  Sum_probs=148.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||++++++|+++ +..|++++|+.+.++...+.+.         .+|++|+++++++++++.+.++++|+|||
T Consensus        39 ITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~  117 (279)
T 3ctm_A           39 VTGSSGGIGWAVAEAYAQA-GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVA  117 (279)
T ss_dssp             ETTTTSSHHHHHHHHHHHH-TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999 5678888998877665544332         28999999999999999999999999999


Q ss_pred             ccCCccc-cCCC-CCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          72 NAAIAFK-VNSS-EPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        72 ~ag~~~~-~~~~-~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||.... .++. +.+.+.|++++++|+.|++.+++.+++.|++  .++||++||..+....                  
T Consensus       118 ~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------------  179 (279)
T 3ctm_A          118 NAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN------------------  179 (279)
T ss_dssp             CGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-------------------
T ss_pred             CCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC------------------
Confidence            9998765 5666 7788999999999999999999999999863  4899999999885420                  


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          ..++...|++||++++.++++++.+++..    | +||+|+||+++|++.+
T Consensus       180 --------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----~-~v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          180 --------------------IPQLQAPYNTAKAACTHLAKSLAIEWAPF----A-RVNTISPGYIDTDITD  225 (279)
T ss_dssp             ----------------------CCHHHHHHHHHHHHHHHHHHHHHTTTT----C-EEEEEEECSBSSTTTS
T ss_pred             --------------------CCCCcccHHHHHHHHHHHHHHHHHHhccc----C-CEEEEeccCCcccccc
Confidence                                02345899999999999999999999887    6 8999999999999875

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.97  E-value=4.9e-30  Score=210.47  Aligned_cols=174  Identities=28%  Similarity=0.316  Sum_probs=150.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++       ..+|++|+++++++++++.+ ++++|+|||||
T Consensus        16 ITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~li~~A   93 (254)
T 2wsb_A           16 VTGAGSGIGLEICRAFAAS-GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-VAPVSILVNSA   93 (254)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCCEEEECC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-hCCCcEEEECC
Confidence            7999999999999999999 568889999988777665443       23899999999999999988 89999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |.....++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..+....                      
T Consensus        94 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------------------  151 (254)
T 2wsb_A           94 GIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN----------------------  151 (254)
T ss_dssp             CCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------------
T ss_pred             ccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC----------------------
Confidence            9987777888899999999999999999999999998864  5899999998874311                      


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                      +..+...|+++|++++.++++++.++...    |+++++|+||++.|++.+
T Consensus       152 ----------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~----gi~v~~v~Pg~v~t~~~~  198 (254)
T 2wsb_A          152 ----------------RPQFASSYMASKGAVHQLTRALAAEWAGR----GVRVNALAPGYVATEMTL  198 (254)
T ss_dssp             ----------------SSSCBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSHHHH
T ss_pred             ----------------CCCcchHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEecccCchhhh
Confidence                            11123799999999999999999999887    788999999999998753

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.97  E-value=4e-30  Score=210.97  Aligned_cols=172  Identities=22%  Similarity=0.306  Sum_probs=150.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+||||++++++|+++ +..|++++|+.+.++...+++.         .+|++|+++++++++++.+.++++|+|||
T Consensus        16 VtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~   94 (255)
T 1fmc_A           16 ITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVN   94 (255)
T ss_dssp             ETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             EECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7999999999999999999 5688899999887776655543         28999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++ +.+.+.|++.+++|+.+++.++++++|.|++  .++||++||..+..                      
T Consensus        95 ~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------------  151 (255)
T 1fmc_A           95 NAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----------------------  151 (255)
T ss_dssp             CCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------------
T ss_pred             CCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC----------------------
Confidence            9998765555 6788999999999999999999999999864  48999999987743                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|+++|++++.++++++.+++..    |+++++|.||++.|++.+
T Consensus       152 ------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~----~i~v~~v~Pg~v~t~~~~  198 (255)
T 1fmc_A          152 ------------------KNINMTSYASSKAAASHLVRNMAFDLGEK----NIRVNGIAPGAILTDALK  198 (255)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHH
T ss_pred             ------------------CCCCCcccHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecccCcchhhh
Confidence                              34456899999999999999999999876    789999999999998754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=4.5e-30  Score=212.73  Aligned_cols=165  Identities=24%  Similarity=0.382  Sum_probs=142.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----------cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----------~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.           .+|++|+++++++++++.+.++++|+|
T Consensus        12 VTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (267)
T 2gdz_A           12 VTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDIL   90 (267)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EECCCCcHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7999999999999999999 5688889998877765544331           289999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |||||..        +.+.|++.+++|+.|++.+++.++|.|++     .++||++||..+..                 
T Consensus        91 v~~Ag~~--------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------------  145 (267)
T 2gdz_A           91 VNNAGVN--------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------------  145 (267)
T ss_dssp             EECCCCC--------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------------
T ss_pred             EECCCCC--------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC-----------------
Confidence            9999974        24679999999999999999999999864     47999999988843                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHH--HHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQ--HALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~l--a~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                             +.++...|++||++++.+++++  +.++...    ||+||+|+||+++|++..
T Consensus       146 -----------------------~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~----gi~v~~v~Pg~v~t~~~~  194 (267)
T 2gdz_A          146 -----------------------PVAQQPVYCASKHGIVGFTRSAALAANLMNS----GVRLNAICPGFVNTAILE  194 (267)
T ss_dssp             -----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTC----CEEEEEEEESCBSSHHHH
T ss_pred             -----------------------CCCCCchHHHHHHHHHHHHHHHHHHHHhccC----CcEEEEEecCcCcchhhh
Confidence                                   3445689999999999999995  5788776    799999999999999754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.97  E-value=4.6e-30  Score=214.76  Aligned_cols=173  Identities=22%  Similarity=0.257  Sum_probs=148.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.          .+|++|+++++++++++.+.++++|+||
T Consensus        33 ITGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li  111 (286)
T 1xu9_A           33 VTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLI  111 (286)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 5689999999888776655432          2899999999999999999999999999


Q ss_pred             Ec-cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NN-AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~-ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      || +|... ..+.+.+.+.+++++++|+.|++.++++++|.|+ ..++||++||.++..                     
T Consensus       112 ~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~---------------------  169 (286)
T 1xu9_A          112 LNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV---------------------  169 (286)
T ss_dssp             ECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS---------------------
T ss_pred             ECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc---------------------
Confidence            99 56643 3455678899999999999999999999999886 458999999988843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                         +.++...|++||++++.++++++.++....  .|+++++|+||+++|++.
T Consensus       170 -------------------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~--~~i~v~~v~Pg~v~t~~~  217 (286)
T 1xu9_A          170 -------------------AYPMVAAYSASKFALDGFFSSIRKEYSVSR--VNVSITLCVLGLIDTETA  217 (286)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHT--CCCEEEEEEECCBCCHHH
T ss_pred             -------------------CCCCccHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeecCccCChhH
Confidence                               344568999999999999999999995321  269999999999999975

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.97  E-value=3.2e-31  Score=217.04  Aligned_cols=173  Identities=27%  Similarity=0.282  Sum_probs=127.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh----hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK----LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||++++++|++  +..|++++|++++++...+.    ...+|++++++ ...+.++.+.++++|+||||||..
T Consensus        10 ITGas~gIG~~~a~~l~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~   86 (245)
T 3e9n_A           10 VTGATGGMGIEIVKDLSR--DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDTLVHAAAVA   86 (245)
T ss_dssp             EESTTSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHH-TSSSCGGGTTCSCCSEEEECC---
T ss_pred             EEcCCCHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHH-HHHHHHHHHhcCCCCEEEECCCcC
Confidence            799999999999999987  45788899998887766541    11279988877 555555667789999999999998


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ...++.+.+.+.|++++++|+.|++.++++++|.|++ +++||++||..+..                            
T Consensus        87 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------------------  138 (245)
T 3e9n_A           87 RDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNG----------------------------  138 (245)
T ss_dssp             -------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------------------------------
T ss_pred             CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccccc----------------------------
Confidence            7777888899999999999999999999999999864 58999999998844                            


Q ss_pred             HHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                  +.++...|++||+++++|+++++.++++.    ||+||+|+||++.|++.+..
T Consensus       139 ------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  187 (245)
T 3e9n_A          139 ------------PHPGNTIYAASKHALRGLADAFRKEEANN----GIRVSTVSPGPTNTPMLQGL  187 (245)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCC--------
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCCccCchhhhh
Confidence                        34456899999999999999999999987    78899999999999987654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.97  E-value=9.6e-30  Score=213.99  Aligned_cols=170  Identities=18%  Similarity=0.165  Sum_probs=149.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.          .+|++|+++++++++++.+.++++|+||
T Consensus        31 ITGasggiG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li  109 (302)
T 1w6u_A           31 ITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVI  109 (302)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEE
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 5678899999887776655442          2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||||.....++.+.+.+.|++++++|+.|++.++++++|.|+   ..++||++||..+..                    
T Consensus       110 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--------------------  169 (302)
T 1w6u_A          110 NNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--------------------  169 (302)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--------------------
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc--------------------
Confidence            999987666677788999999999999999999999999885   248999999987733                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                          +.++...|++||++++.++++++.++...    |+++++|+||++.|+
T Consensus       170 --------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~----gi~v~~v~Pg~v~t~  213 (302)
T 1w6u_A          170 --------------------GSGFVVPSASAKAGVEAMSKSLAAEWGKY----GMRFNVIQPGPIKTK  213 (302)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCC-
T ss_pred             --------------------CCCCcchhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeeccCCCc
Confidence                                33456899999999999999999999887    789999999999997

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.97  E-value=4.8e-30  Score=212.62  Aligned_cols=174  Identities=24%  Similarity=0.296  Sum_probs=150.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+||||++++++|+++| ..|++++| +.+.++...+++.         .+|++|+++++++++++.+.++++|+||
T Consensus        26 ItGasggiG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi  104 (274)
T 1ja9_A           26 TTGAGRGIGRGIAIELGRRG-ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVM  104 (274)
T ss_dssp             ETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEE
T ss_pred             EeCCCchHHHHHHHHHHHCC-CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999999999999999994 57777777 7666665554432         2899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||||.....++.+.+.+.|++++++|+.|++.+++++++.|+++++||++||..+..                       
T Consensus       105 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~-----------------------  161 (274)
T 1ja9_A          105 SNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM-----------------------  161 (274)
T ss_dssp             CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC-----------------------
T ss_pred             ECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhcc-----------------------
Confidence            999987766677788999999999999999999999999987668999999988741                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                      .+.++...|+++|++++.++++++.++...    |+++++|.||++.|++..
T Consensus       162 ----------------~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~----gi~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          162 ----------------TGIPNHALYAGSKAAVEGFCRAFAVDCGAK----GVTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             ----------------CSCCSCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHHH
T ss_pred             ----------------CCCCCCchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcccccchh
Confidence                            123455899999999999999999999887    788999999999998754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.97  E-value=9.2e-31  Score=222.09  Aligned_cols=172  Identities=20%  Similarity=0.201  Sum_probs=140.7

Q ss_pred             CCCC--CCcHHHHHHHHHHHhcCCeEEEEecCc-----------chhHHHHHhh-----------hc------------c
Q psy7994           1 VTGA--NKGIGYGIVKGLIQQFDGIIYLTARDA-----------SRGQEALEKL-----------QK------------L   44 (230)
Q Consensus         1 ItG~--s~giG~~~a~~la~~g~~~vi~~~r~~-----------~~~~~~~~~~-----------~~------------~   44 (230)
                      ||||  ++|||+++++.|+++| ..|++++|++           .+++.. +++           ..            +
T Consensus        14 VTGa~~s~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   91 (315)
T 2o2s_A           14 VAGVADSHGYGWAIAKHLASAG-ARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAAFDKPEDVPQ   91 (315)
T ss_dssp             EECCSSSSSHHHHHHHHHHTTT-CEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTTCSSTTSSCH
T ss_pred             EeCCCCCCChHHHHHHHHHHCC-CEEEEEecccccchhhhhhhhhhhhhh-hhhhccccccccccccccccccccchhhh
Confidence            7999  8999999999999994 5677777643           122222 111           11            2


Q ss_pred             cCC--------CHHHHHHHHHHHHhhcCCCcEEEEccCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC
Q psy7994          45 DIL--------DKNSIKALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH  114 (230)
Q Consensus        45 D~s--------~~~~v~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~  114 (230)
                      |++        |+++++++++++.+.+++||+||||||...  ..++.+.+.+.|++++++|+.|+++++++++|.|+++
T Consensus        92 Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~  171 (315)
T 2o2s_A           92 DIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEG  171 (315)
T ss_dssp             HHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEE
T ss_pred             hhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcC
Confidence            334        367899999999999999999999999753  4567778899999999999999999999999999878


Q ss_pred             ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCC-chhhHHHHHHHHHHHHHHHhh
Q psy7994         115 GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHALL  193 (230)
Q Consensus       115 g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~  193 (230)
                      |+||++||..+..                                        +.++. ..|++||+++.+|+++++.++
T Consensus       172 g~Iv~isS~~~~~----------------------------------------~~~~~~~~Y~asKaal~~l~~~la~el  211 (315)
T 2o2s_A          172 GSAVTLSYLAAER----------------------------------------VVPGYGGGMSSAKAALESDTRTLAWEA  211 (315)
T ss_dssp             EEEEEEEEGGGTS----------------------------------------CCTTCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEecccccc----------------------------------------cCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999988743                                        33344 489999999999999999999


Q ss_pred             hh-hhccCCeEEEEecCCccccCCCC
Q psy7994         194 SQ-DAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       194 ~~-~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                      .+ .    ||+||+|+||+|+|+|..
T Consensus       212 ~~~~----gIrvn~v~PG~v~T~~~~  233 (315)
T 2o2s_A          212 GQKY----GVRVNAISAGPLKSRAAS  233 (315)
T ss_dssp             HHHT----CCEEEEEEECCCCCHHHH
T ss_pred             Cccc----CeEEEEEecccccchhhh
Confidence            85 5    799999999999998743

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.97  E-value=1.1e-29  Score=207.38  Aligned_cols=169  Identities=30%  Similarity=0.331  Sum_probs=146.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||++++++|+++ +..|++++|++++++...+++.     .+|++|+++++++++    .++++|+||||||.
T Consensus        12 ITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~   86 (244)
T 3d3w_A           12 VTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAV   86 (244)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCCEEEECCCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH----HcCCCCEEEECCcc
Confidence            7999999999999999999 5678889999887776655432     389999999988876    56899999999998


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ....++.+.+.+.|++++++|+.+++.+++++++.|++   .++||++||..+..                         
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------------------  141 (244)
T 3d3w_A           87 ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-------------------------  141 (244)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-------------------------
T ss_pred             CCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc-------------------------
Confidence            77667777888999999999999999999999998853   58999999988743                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                     +.++...|++||++++.++++++.++++.    |+++++|+||++.|++..
T Consensus       142 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~v~Pg~v~t~~~~  188 (244)
T 3d3w_A          142 ---------------AVTNHSVYCSTKGALDMLTKVMALELGPH----KIRVNAVNPTVVMTSMGQ  188 (244)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBTTTTHH
T ss_pred             ---------------CCCCCchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeccccccchh
Confidence                           34456899999999999999999999887    789999999999999854

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.97  E-value=7.7e-31  Score=222.85  Aligned_cols=174  Identities=16%  Similarity=0.200  Sum_probs=122.8

Q ss_pred             CCCC--CCcHHHHHHHHHHHhcCCeEEEEecCc-----------chhHH-----------HHHhh------------hc-
Q psy7994           1 VTGA--NKGIGYGIVKGLIQQFDGIIYLTARDA-----------SRGQE-----------ALEKL------------QK-   43 (230)
Q Consensus         1 ItG~--s~giG~~~a~~la~~g~~~vi~~~r~~-----------~~~~~-----------~~~~~------------~~-   43 (230)
                      ||||  ++|||+++++.|+++| ..|++++|++           ++++.           ..+++            .. 
T Consensus        14 VTGa~~s~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (319)
T 2ptg_A           14 VAGVADSNGYGWAICKLLRAAG-ARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPL   92 (319)
T ss_dssp             EECCCCTTSHHHHHHHHHHHTT-CEEEEEECHHHHHHHHC--------------------------------CCSEEEEC
T ss_pred             EeCCCCCCcHHHHHHHHHHHCC-CEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccccc
Confidence            7998  8999999999999995 5777776542           22221           11111            11 


Q ss_pred             -----------ccCCC--------HHHHHHHHHHHHhhcCCCcEEEEccCCcc--ccCCCCCChhHHHHHHHHhhhhHHH
Q psy7994          44 -----------LDILD--------KNSIKALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALID  102 (230)
Q Consensus        44 -----------~D~s~--------~~~v~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~  102 (230)
                                 +|++|        +++++++++++.+.+++||+||||||...  ..++.+.+.+.|+++|++|+.|+++
T Consensus        93 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~  172 (319)
T 2ptg_A           93 DAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVS  172 (319)
T ss_dssp             CTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHH
Confidence                       23333        45899999999999999999999999753  4567788999999999999999999


Q ss_pred             HHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCC-chhhHHHHH
Q psy7994         103 VCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN-SAYAATKLG  181 (230)
Q Consensus       103 l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a  181 (230)
                      ++++++|.|+++|+||++||..+..                                        +.++. ..|++||++
T Consensus       173 l~~~~~~~m~~~g~Iv~isS~~~~~----------------------------------------~~~~~~~~Y~asKaa  212 (319)
T 2ptg_A          173 LLQHFLPLMKEGGSALALSYIASEK----------------------------------------VIPGYGGGMSSAKAA  212 (319)
T ss_dssp             HHHHHGGGEEEEEEEEEEEECC----------------------------------------------------------
T ss_pred             HHHHHHHHHhcCceEEEEecccccc----------------------------------------ccCccchhhHHHHHH
Confidence            9999999998779999999998843                                        22334 589999999


Q ss_pred             HHHHHHHHHHhhhh-hhccCCeEEEEecCCccccCCCCC
Q psy7994         182 VTKLSFLQHALLSQ-DAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       182 ~~~l~~~la~~~~~-~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                      +.+|+++++.|+.+ .    ||+||+|+||+++|+|.+.
T Consensus       213 l~~l~~~la~el~~~~----gIrvn~v~PG~v~T~~~~~  247 (319)
T 2ptg_A          213 LESDCRTLAFEAGRAR----AVRVNCISAGPLKSRAASA  247 (319)
T ss_dssp             THHHHHHHHHHHHHHH----CCEEEEEEECCCC------
T ss_pred             HHHHHHHHHHHhcccc----CeeEEEEeeCCccChhhhh
Confidence            99999999999985 6    7899999999999998654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=3.7e-29  Score=210.58  Aligned_cols=170  Identities=23%  Similarity=0.334  Sum_probs=148.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------------cccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------------KLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------------~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||++|||++++++|+++ +..|++++|+.++++...+++.              .+|++|+++++++++++.+.++++
T Consensus        23 VTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  101 (303)
T 1yxm_A           23 VTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKI  101 (303)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999 5688889999887776655542              289999999999999999999999


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccc-cc-CCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL-LR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~-l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |+||||||.....++.+.+.+.|++++++|+.|++.++++++|. ++ ..++||++||.. ..                 
T Consensus       102 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~-----------------  163 (303)
T 1yxm_A          102 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA-----------------  163 (303)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT-----------------
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc-----------------
Confidence            99999999876666777888999999999999999999999994 44 358999999987 32                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                             +.++...|+++|+++.+++++++.++...    ||++++|+||++.|++
T Consensus       164 -----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          164 -----------------------GFPLAVHSGAARAGVYNLTKSLALEWACS----GIRINCVAPGVIYSQT  208 (303)
T ss_dssp             -----------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCCTG
T ss_pred             -----------------------CCCcchhhHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCCcccch
Confidence                                   23345899999999999999999999887    7999999999999994

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.96  E-value=4.3e-29  Score=203.63  Aligned_cols=169  Identities=28%  Similarity=0.269  Sum_probs=146.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+||||++++++|+++ +..|++++|++++++...+++.     .+|++|+++++++++    .++++|+||||||.
T Consensus        12 VTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~   86 (244)
T 1cyd_A           12 VTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAAL   86 (244)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCSEEEECCCC
T ss_pred             EeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH----HcCCCCEEEECCcc
Confidence            7999999999999999999 5678889999887766654332     389999999998876    56899999999998


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ....++.+.+.+.|++++++|+.|++.++++++|.|++   .++||++||..++.                         
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------------------  141 (244)
T 1cyd_A           87 VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-------------------------  141 (244)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-------------------------
T ss_pred             cCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC-------------------------
Confidence            77667777888999999999999999999999998853   58999999988743                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                     +.++...|++||++++.++++++.+++..    |+++++|+||++.|++..
T Consensus       142 ---------------~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~----gi~v~~v~pg~v~t~~~~  188 (244)
T 1cyd_A          142 ---------------TFPNLITYSSTKGAMTMLTKAMAMELGPH----KIRVNSVNPTVVLTDMGK  188 (244)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBTTHHHH
T ss_pred             ---------------CCCCcchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcccCcccc
Confidence                           33456899999999999999999999887    788999999999998743

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=2.4e-29  Score=204.66  Aligned_cols=169  Identities=20%  Similarity=0.245  Sum_probs=143.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++++|+.+ .+..  .+..+|++|+++++++++++ +.++++|++|||||......
T Consensus         7 VtGasggiG~~la~~l~~~-G~~V~~~~r~~~-~~~~--~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~~~   81 (242)
T 1uay_A            7 VTGGASGLGRAAALALKAR-GYRVVVLDLRRE-GEDL--IYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEK   81 (242)
T ss_dssp             EETTTSHHHHHHHHHHHHH-TCEEEEEESSCC-SSSS--EEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCC
T ss_pred             EeCCCChHHHHHHHHHHHC-CCEEEEEccCcc-ccce--EEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccccCccc
Confidence            7999999999999999999 567888888765 2211  33458999999999999999 88899999999999876655


Q ss_pred             CCCCChh----HHHHHHHHhhhhHHHHHHHhcccccCC--------ceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          81 SSEPFGS----QALHTMRTNYFALIDVCDILFPLLRSH--------GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        81 ~~~~~~~----~~~~~~~~n~~g~~~l~~~~~~~l~~~--------g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      +.+.+.+    .|++++++|+.+++.+++++++.|++.        ++||++||..+..                     
T Consensus        82 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~---------------------  140 (242)
T 1uay_A           82 ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE---------------------  140 (242)
T ss_dssp             SBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH---------------------
T ss_pred             ccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc---------------------
Confidence            5555444    899999999999999999999998753        3999999987743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|+++|++++.++++++.++...    ||++++|+||++.|++..
T Consensus       141 -------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~  187 (242)
T 1uay_A          141 -------------------GQIGQAAYAASKGGVVALTLPAARELAGW----GIRVVTVAPGLFDTPLLQ  187 (242)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSCSSHHHH
T ss_pred             -------------------CCCCCchhhHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeccCcchhhh
Confidence                               33456899999999999999999999887    789999999999998754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.96  E-value=3.5e-29  Score=205.65  Aligned_cols=166  Identities=19%  Similarity=0.252  Sum_probs=139.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH-HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL-EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~-~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||||++|||++++++|+++ +..|++++|+++.+++.. ..+. +|+  .++++++++++    .++|+||||||.....
T Consensus        24 VTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~D~--~~~~~~~~~~~----~~iD~lv~~Ag~~~~~   95 (249)
T 1o5i_A           24 VLAASRGIGRAVADVLSQE-GAEVTICARNEELLKRSGHRYVV-CDL--RKDLDLLFEKV----KEVDILVLNAGGPKAG   95 (249)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHTCSEEEE-CCT--TTCHHHHHHHS----CCCSEEEECCCCCCCB
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHhhCCeEEE-eeH--HHHHHHHHHHh----cCCCEEEECCCCCCCC
Confidence            7999999999999999999 567888899874433220 0112 788  56777777765    3899999999987777


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      ++.+.+.+.|++++++|+.|++.++++++|.|++  .++||++||..++.                              
T Consensus        96 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------------------  145 (249)
T 1o5i_A           96 FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS------------------------------  145 (249)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------------------
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC------------------------------
Confidence            7778899999999999999999999999999864  38999999988843                              


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                +.++...|+++|++++.++++++.++...    ||+||+|+||++.|++..
T Consensus       146 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~  192 (249)
T 1o5i_A          146 ----------PIENLYTSNSARMALTGFLKTLSFEVAPY----GITVNCVAPGWTETERVK  192 (249)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTHH
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCCCccCccc
Confidence                      34456899999999999999999999987    799999999999999853

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.96  E-value=1.1e-28  Score=215.78  Aligned_cols=176  Identities=13%  Similarity=-0.015  Sum_probs=142.0

Q ss_pred             CCCCCCcHHHH--HHHHHHHhcCCeEEEEecCcchh------------HHHHHhhh---------cccCCCHHHHHHHHH
Q psy7994           1 VTGANKGIGYG--IVKGLIQQFDGIIYLTARDASRG------------QEALEKLQ---------KLDILDKNSIKALHD   57 (230)
Q Consensus         1 ItG~s~giG~~--~a~~la~~g~~~vi~~~r~~~~~------------~~~~~~~~---------~~D~s~~~~v~~~~~   57 (230)
                      ||||++|||++  +++.|+++ +..|++++|+....            +...+.+.         .+|++|+++++++++
T Consensus        65 VTGassGIG~A~aia~ala~~-Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~  143 (418)
T 4eue_A           65 IVGASSGFGLATRISVAFGGP-EAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIK  143 (418)
T ss_dssp             EESCSSHHHHHHHHHHHHSSS-CCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHH
T ss_pred             EECCCcHHHHHHHHHHHHHhC-CCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHH
Confidence            79999999999  99999998 56787888765431            22222211         289999999999999


Q ss_pred             HHHhhcCCCcEEEEccCCc-------------cccCC---------------------CCCChhHHHHHHHHhhhhHH-H
Q psy7994          58 HLEAEHGGVDVLVNNAAIA-------------FKVNS---------------------SEPFGSQALHTMRTNYFALI-D  102 (230)
Q Consensus        58 ~~~~~~~~id~lv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~g~~-~  102 (230)
                      ++.+.+|+||+||||||..             ...++                     .+.+.++|++++++|..+.| .
T Consensus       144 ~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~  223 (418)
T 4eue_A          144 YIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDWQE  223 (418)
T ss_dssp             HHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHH
T ss_pred             HHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHHHH
Confidence            9999999999999999974             11222                     34688999999999999998 7


Q ss_pred             HHHHhcc-cc-cCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCC--chhhHH
Q psy7994         103 VCDILFP-LL-RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN--SAYAAT  178 (230)
Q Consensus       103 l~~~~~~-~l-~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~s  178 (230)
                      +++++++ .| .++|+||++||+++..                                        +.+.+  ..|++|
T Consensus       224 ~~~~l~~~~~~~~gg~IV~iSSi~~~~----------------------------------------~~p~~~~~aY~AS  263 (418)
T 4eue_A          224 WCEELLYEDCFSDKATTIAYSYIGSPR----------------------------------------TYKIYREGTIGIA  263 (418)
T ss_dssp             HHHHHHHTTCEEEEEEEEEEECCCCGG----------------------------------------GTTTTTTSHHHHH
T ss_pred             HHHHHHHHhhhcCCcEEEEEeCchhcC----------------------------------------CCCccccHHHHHH
Confidence            7777765 33 3568999999998843                                        33344  899999


Q ss_pred             HHHHHHHHHHHHHhhhh-hhccCCeEEEEecCCccccCCCCCCC
Q psy7994         179 KLGVTKLSFLQHALLSQ-DAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       179 K~a~~~l~~~la~~~~~-~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                      |+|+.+|+++|+.|+++ .    |||||+|+||++.|+++...+
T Consensus       264 KaAL~~ltrsLA~ELa~~~----GIrVN~V~PG~v~T~~s~~ip  303 (418)
T 4eue_A          264 KKDLEDKAKLINEKLNRVI----GGRAFVSVNKALVTKASAYIP  303 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHH----SCEEEEEECCCCCCHHHHTST
T ss_pred             HHHHHHHHHHHHHHhCCcc----CeEEEEEECCcCcChhhhcCC
Confidence            99999999999999999 8    788999999999999876553

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.95  E-value=3.2e-29  Score=206.08  Aligned_cols=189  Identities=20%  Similarity=0.187  Sum_probs=132.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||++++++|+++ +..|++++|++++++.   . ..+|++|+++++++++++   ++++|+||||||....  
T Consensus         6 VTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~---~-~~~Dl~~~~~v~~~~~~~---~~~id~lv~~Ag~~~~--   75 (257)
T 1fjh_A            6 ISGCATGIGAATRKVLEAA-GHQIVGIDIRDAEVIA---D-LSTAEGRKQAIADVLAKC---SKGMDGLVLCAGLGPQ--   75 (257)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSSSSEEC---C-TTSHHHHHHHHHHHHTTC---TTCCSEEEECCCCCTT--
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchhhcc---c-cccCCCCHHHHHHHHHHh---CCCCCEEEECCCCCCC--
Confidence            7999999999999999999 5678888998765542   1 448999999999888743   3899999999998531  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                           .+.|++++++|+.|++.++++++|.|+++  ++||++||..+...+...+.....+..+  +.+.......    
T Consensus        76 -----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----  144 (257)
T 1fjh_A           76 -----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAG--EEAKARAIVE----  144 (257)
T ss_dssp             -----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHT--CHHHHHHHHH----
T ss_pred             -----cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhccc--chhhhhhhhh----
Confidence                 13489999999999999999999999654  8999999998864221110000000000  0000000000    


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                            ...+.++...|++||++++.++++++.++...    ||+||+|+||++.|++.+..
T Consensus       145 ------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~  196 (257)
T 1fjh_A          145 ------HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEA----GVRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             ------TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHT----TCEEEEEEECC---------
T ss_pred             ------cccCCCCccHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEeeCCCCCccchhh
Confidence                  01122345899999999999999999999887    78899999999999987643

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.95  E-value=2.5e-28  Score=220.12  Aligned_cols=168  Identities=16%  Similarity=0.093  Sum_probs=144.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEE-ecCc-------------chhHHHHHhhhc---------ccCCCHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLT-ARDA-------------SRGQEALEKLQK---------LDILDKNSIKALHD   57 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~-~r~~-------------~~~~~~~~~~~~---------~D~s~~~~v~~~~~   57 (230)
                      ||||++|||++++++|+++|..+|+++ +|+.             +.+++..+++..         ||++|+++++++++
T Consensus       256 ITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~  335 (525)
T 3qp9_A          256 VTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLA  335 (525)
T ss_dssp             ESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHH
T ss_pred             EECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHH
Confidence            799999999999999999987778888 8884             444555554432         99999999999999


Q ss_pred             HHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHH
Q psy7994          58 HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        58 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      ++. .+++||+||||||+.....+.+.+.+.|+++|++|+.|++.+++++.+.+++   .++||++||+++..       
T Consensus       336 ~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~-------  407 (525)
T 3qp9_A          336 GVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW-------  407 (525)
T ss_dssp             TSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT-------
T ss_pred             HHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC-------
Confidence            998 7899999999999988888999999999999999999999999999998865   47999999999854       


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                                       +.+++..|+++|+++++|+    .+++..    |+++++|+||+++|
T Consensus       408 ---------------------------------g~~g~~~YaaaKa~l~~lA----~~~~~~----gi~v~sI~pG~~~t  446 (525)
T 3qp9_A          408 ---------------------------------GGAGQGAYAAGTAFLDALA----GQHRAD----GPTVTSVAWSPWEG  446 (525)
T ss_dssp             ---------------------------------CCTTCHHHHHHHHHHHHHH----TSCCSS----CCEEEEEEECCBTT
T ss_pred             ---------------------------------CCCCCHHHHHHHHHHHHHH----HHHHhC----CCCEEEEECCcccc
Confidence                                             5567799999999998874    555555    78999999999999


Q ss_pred             CCC
Q psy7994         215 DMS  217 (230)
Q Consensus       215 ~~~  217 (230)
                      +|.
T Consensus       447 gm~  449 (525)
T 3qp9_A          447 SRV  449 (525)
T ss_dssp             SGG
T ss_pred             ccc
Confidence            997

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.95  E-value=4.1e-28  Score=192.57  Aligned_cols=158  Identities=16%  Similarity=0.157  Sum_probs=139.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+||||++++++|+ + +..|++++|+++        ...+|++|+++++++++++    +++|+||||||.....+
T Consensus         8 VtGasg~iG~~~~~~l~-~-g~~V~~~~r~~~--------~~~~D~~~~~~~~~~~~~~----~~~d~vi~~ag~~~~~~   73 (202)
T 3d7l_A            8 LIGASGTLGSAVKERLE-K-KAEVITAGRHSG--------DVTVDITNIDSIKKMYEQV----GKVDAIVSATGSATFSP   73 (202)
T ss_dssp             EETTTSHHHHHHHHHHT-T-TSEEEEEESSSS--------SEECCTTCHHHHHHHHHHH----CCEEEEEECCCCCCCCC
T ss_pred             EEcCCcHHHHHHHHHHH-C-CCeEEEEecCcc--------ceeeecCCHHHHHHHHHHh----CCCCEEEECCCCCCCCC
Confidence            79999999999999999 8 678888888875        3458999999999998875    78999999999876666


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                      +.+.+.+.|++++++|+.+++.+++++.+.|+++++||++||..+..                                 
T Consensus        74 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~---------------------------------  120 (202)
T 3d7l_A           74 LTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED---------------------------------  120 (202)
T ss_dssp             GGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS---------------------------------
T ss_pred             hhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC---------------------------------
Confidence            77788899999999999999999999999998779999999987733                                 


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                             +.++...|+.+|++++.+++.++.++ ..    |+++++|.||++.|++.
T Consensus       121 -------~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~----gi~v~~v~pg~v~~~~~  165 (202)
T 3d7l_A          121 -------PIVQGASAAMANGAVTAFAKSAAIEM-PR----GIRINTVSPNVLEESWD  165 (202)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHTTSC-ST----TCEEEEEEECCBGGGHH
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHHHHHc-cC----CeEEEEEecCccCCchh
Confidence                   34456899999999999999999998 54    78999999999999863

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.95  E-value=7.3e-28  Score=191.55  Aligned_cols=164  Identities=20%  Similarity=0.138  Sum_probs=139.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+||||++++++|+++   .|++++|++++++...+.+    ..+|++|++++++++++    ++++|+||||||..
T Consensus         5 VtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~   77 (207)
T 2yut_A            5 ITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE----AGPLDLLVHAVGKA   77 (207)
T ss_dssp             EETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH----HCSEEEEEECCCCC
T ss_pred             EEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh----cCCCCEEEECCCcC
Confidence            7999999999999999996   8999999988777666543    34999999999999987    68999999999998


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      ...++.+.+.+.|++++++|+.+++.+++++..  .+.++||++||..++.                             
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~sS~~~~~-----------------------------  126 (207)
T 2yut_A           78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARF--QKGARAVFFGAYPRYV-----------------------------  126 (207)
T ss_dssp             CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE--EEEEEEEEECCCHHHH-----------------------------
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh--cCCcEEEEEcChhhcc-----------------------------
Confidence            777777888899999999999999999999832  2348999999987743                             


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                 +.++...|+++|++++.++++++.++...    |+++++|.||++.|++.
T Consensus       127 -----------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~----gi~v~~v~pg~v~t~~~  172 (207)
T 2yut_A          127 -----------QVPGFAAYAAAKGALEAYLEAARKELLRE----GVHLVLVRLPAVATGLW  172 (207)
T ss_dssp             -----------SSTTBHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEECCCCBCSGGG
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHHhhh----CCEEEEEecCcccCCCc
Confidence                       33456899999999999999999999876    78899999999999874

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.93  E-value=1.2e-25  Score=222.06  Aligned_cols=171  Identities=21%  Similarity=0.284  Sum_probs=142.4

Q ss_pred             CCCCCCc-HHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhh-------------hcccCCCHHHHHHHHHHHHhh---
Q psy7994           1 VTGANKG-IGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKL-------------QKLDILDKNSIKALHDHLEAE---   62 (230)
Q Consensus         1 ItG~s~g-iG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~-------------~~~D~s~~~~v~~~~~~~~~~---   62 (230)
                      ||||++| ||+++++.|+++|+ .|+++ +|+.++++...+++             ..+|++|+++++++++++.+.   
T Consensus       680 VTGASsGgIG~aIA~~La~~GA-~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~  758 (1887)
T 2uv8_A          680 ITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKN  758 (1887)
T ss_dssp             EESCCSSSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTT
T ss_pred             EECCCCcHHHHHHHHHHHHCCC-EEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhccc
Confidence            7999998 99999999999955 56665 68877776554443             128999999999999999998   


Q ss_pred             --cC-CCcEEEEccCCcccc-CCCCCC--hhHHHHHHHHhhhhHHHHHHHh--cccccCC--ceEEEecCCCccccccch
Q psy7994          63 --HG-GVDVLVNNAAIAFKV-NSSEPF--GSQALHTMRTNYFALIDVCDIL--FPLLRSH--GRVVNVSSSCGHLCHVTS  132 (230)
Q Consensus        63 --~~-~id~lv~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~g~~~l~~~~--~~~l~~~--g~ii~~sS~~~~~~~~~~  132 (230)
                        +| +||+||||||+.... ++.+.+  .+.|+++|++|+.|++.+++.+  +|.|+++  ++||++||.++..     
T Consensus       759 ~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~-----  833 (1887)
T 2uv8_A          759 GGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF-----  833 (1887)
T ss_dssp             TSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCS-----
T ss_pred             cccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhcc-----
Confidence              66 999999999997666 777777  8999999999999999999998  7888654  7999999998854     


Q ss_pred             HHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHH-HHHHHHhhhhhhccCCeEEEEecCCc
Q psy7994         133 EALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKL-SFLQHALLSQDAIREDLVVNCVHPGY  211 (230)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~~~~~~~~~~~i~v~~v~pG~  211 (230)
                                                         +  +...|++||+++.+| ++.++.+++..     |+||+|+||+
T Consensus       834 -----------------------------------g--g~~aYaASKAAL~~Lttr~lA~ela~~-----IrVNaV~PG~  871 (1887)
T 2uv8_A          834 -----------------------------------G--GDGMYSESKLSLETLFNRWHSESWANQ-----LTVCGAIIGW  871 (1887)
T ss_dssp             -----------------------------------S--CBTTHHHHHHHGGGHHHHHHHSSCTTT-----EEEEEEEECC
T ss_pred             -----------------------------------C--CCchHHHHHHHHHHHHHHHHHHHhCCC-----eEEEEEEecc
Confidence                                               2  347899999999999 89999998875     8899999999


Q ss_pred             cc-cCCCCC
Q psy7994         212 VN-TDMSSG  219 (230)
Q Consensus       212 v~-t~~~~~  219 (230)
                      ++ |+|...
T Consensus       872 V~tT~m~~~  880 (1887)
T 2uv8_A          872 TRGTGLMSA  880 (1887)
T ss_dssp             EECC-----
T ss_pred             ccccccccc
Confidence            99 888653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.93  E-value=3.5e-26  Score=214.93  Aligned_cols=163  Identities=19%  Similarity=0.190  Sum_probs=142.7

Q ss_pred             CCCCCCcHHHHHHHHHH-HhcCCeEEEEecC---cchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLI-QQFDGIIYLTARD---ASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la-~~g~~~vi~~~r~---~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      ||||++|||++++++|+ ++|..+|++++|+   .+..++..++++.         ||++|+++++++++++.+.+ +||
T Consensus       535 ItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~-~id  613 (795)
T 3slk_A          535 VTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEH-PLT  613 (795)
T ss_dssp             EETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS-CEE
T ss_pred             eccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CCE
Confidence            79999999999999999 7877789999998   4445555555542         89999999999999998876 999


Q ss_pred             EEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      +||||||+..+..+.+++.++|+++|++|+.|++++++++.|.|    +||++||.++..                    
T Consensus       614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l----~iV~~SS~ag~~--------------------  669 (795)
T 3slk_A          614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV----ALVLFSSVSGVL--------------------  669 (795)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS----EEEEEEETHHHH--------------------
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC----EEEEEccHHhcC--------------------
Confidence            99999999988888999999999999999999999999998888    899999999854                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                          +.+++..|+++|+    |+++++++++..    |+++|+|+||++.|.+
T Consensus       670 --------------------g~~g~~~YaAaka----~~~alA~~~~~~----Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          670 --------------------GSGGQGNYAAANS----FLDALAQQRQSR----GLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             --------------------TCSSCHHHHHHHH----HHHHHHHHHHHT----TCCEEEEEECCCSCCC
T ss_pred             --------------------CCCCCHHHHHHHH----HHHHHHHHHHHc----CCeEEEEECCeECcch
Confidence                                5667799999995    667777888877    7889999999999875

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.93  E-value=3.9e-26  Score=219.89  Aligned_cols=170  Identities=21%  Similarity=0.284  Sum_probs=144.1

Q ss_pred             CCCCCCc-HHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhh-------------hcccCCCHHHHHHHHHHHHhh---
Q psy7994           1 VTGANKG-IGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKL-------------QKLDILDKNSIKALHDHLEAE---   62 (230)
Q Consensus         1 ItG~s~g-iG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~-------------~~~D~s~~~~v~~~~~~~~~~---   62 (230)
                      ||||++| ||+++|+.|+++|. .|+++ +|+.+.++...+++             ..+|++|+++++++++++.+.   
T Consensus       481 VTGASgGGIGrAIAr~LA~~GA-~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~  559 (1688)
T 2pff_A          481 ITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKN  559 (1688)
T ss_dssp             ECSCSSSSTHHHHHHHHHHHTC-EEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTS
T ss_pred             EECCChHHHHHHHHHHHHHCcC-EEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhccc
Confidence            7999998 99999999999955 55555 78777666554444             128999999999999999998   


Q ss_pred             --cC-CCcEEEEccCCcccc-CCCCCC--hhHHHHHHHHhhhhHHHHHHHh--cccccCC--ceEEEecCCCccccccch
Q psy7994          63 --HG-GVDVLVNNAAIAFKV-NSSEPF--GSQALHTMRTNYFALIDVCDIL--FPLLRSH--GRVVNVSSSCGHLCHVTS  132 (230)
Q Consensus        63 --~~-~id~lv~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~g~~~l~~~~--~~~l~~~--g~ii~~sS~~~~~~~~~~  132 (230)
                        +| +||+||||||+.... ++.+.+  .+.|+++|++|+.|++.+++++  +|.|+++  ++||++||.++..     
T Consensus       560 ~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~-----  634 (1688)
T 2pff_A          560 GGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF-----  634 (1688)
T ss_dssp             SSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTS-----
T ss_pred             cccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhcc-----
Confidence              77 999999999997666 777777  8999999999999999999998  7888654  7999999998843     


Q ss_pred             HHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHH-HHHHHHhhhhhhccCCeEEEEecCCc
Q psy7994         133 EALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKL-SFLQHALLSQDAIREDLVVNCVHPGY  211 (230)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~~~~~~~~~~~i~v~~v~pG~  211 (230)
                                                         +  +...|++||+|+.+| ++.++.+++..     |+||+|+||+
T Consensus       635 -----------------------------------G--g~saYaASKAAL~aLttrsLAeEla~~-----IRVNaVaPG~  672 (1688)
T 2pff_A          635 -----------------------------------G--GDGMYSESKLSLETLFNRWHSESWANQ-----LTVCGAIIGW  672 (1688)
T ss_dssp             -----------------------------------S--CBTTHHHHHHHHTHHHHHTTTSSCTTT-----EECCCCCCCC
T ss_pred             -----------------------------------C--CchHHHHHHHHHHHHHHHHHHHHcCCC-----eEEEEEEECc
Confidence                                               2  347999999999999 78888888775     8899999999


Q ss_pred             cc-cCCCC
Q psy7994         212 VN-TDMSS  218 (230)
Q Consensus       212 v~-t~~~~  218 (230)
                      ++ |+|..
T Consensus       673 V~TT~M~~  680 (1688)
T 2pff_A          673 TRGTGLMS  680 (1688)
T ss_dssp             CCCCSSSC
T ss_pred             CcCCcccC
Confidence            99 78754

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.93  E-value=1.8e-25  Score=199.83  Aligned_cols=166  Identities=22%  Similarity=0.190  Sum_probs=139.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||++++++|+++|..+|++++|+..   ..++..+++..         ||++|+++++++++++.+. ++||+
T Consensus       244 ITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-g~ld~  322 (496)
T 3mje_A          244 VTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-APLTA  322 (496)
T ss_dssp             EETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-SCEEE
T ss_pred             EECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-CCCeE
Confidence            79999999999999999997779999999643   34444444432         9999999999999998776 78999


Q ss_pred             EEEccCCc-cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          69 LVNNAAIA-FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        69 lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||||||+. ...++.+.+.+.|+++|++|+.|++.+.+++.+.  ..++||++||..+..                    
T Consensus       323 vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~--~~~~iV~~SS~a~~~--------------------  380 (496)
T 3mje_A          323 VFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL--DLDAFVLFSSGAAVW--------------------  380 (496)
T ss_dssp             EEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS--CCSEEEEEEEHHHHT--------------------
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEEEeChHhcC--------------------
Confidence            99999997 6778889999999999999999999999998764  347999999998844                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                          +.+++..|+++|+++++|++.    ++..    |+++++|+||++.+..+
T Consensus       381 --------------------g~~g~~~YaAaKa~ldala~~----~~~~----Gi~v~sV~pG~w~~~gm  422 (496)
T 3mje_A          381 --------------------GSGGQPGYAAANAYLDALAEH----RRSL----GLTASSVAWGTWGEVGM  422 (496)
T ss_dssp             --------------------TCTTCHHHHHHHHHHHHHHHH----HHHT----TCCCEEEEECEESSSCC
T ss_pred             --------------------CCCCcHHHHHHHHHHHHHHHH----HHhc----CCeEEEEECCcccCCcc
Confidence                                556679999999999888764    4444    68899999998866543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.92  E-value=7.9e-25  Score=215.94  Aligned_cols=170  Identities=21%  Similarity=0.232  Sum_probs=141.5

Q ss_pred             CCCCCCc-HHHHHHHHHHHhcCCeEEEE-ecCcchhHHHHHhh----h---------cccCCCHHHHHHHHHHHHhh---
Q psy7994           1 VTGANKG-IGYGIVKGLIQQFDGIIYLT-ARDASRGQEALEKL----Q---------KLDILDKNSIKALHDHLEAE---   62 (230)
Q Consensus         1 ItG~s~g-iG~~~a~~la~~g~~~vi~~-~r~~~~~~~~~~~~----~---------~~D~s~~~~v~~~~~~~~~~---   62 (230)
                      ||||++| ||+++++.|+++|. .|+++ +|+.+.++...+++    .         .||++|+++++++++++.+.   
T Consensus       657 VTGASgGgIG~aIAr~LA~~GA-~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~  735 (1878)
T 2uv9_A          657 MTGAGAGSIGAEVLQGLLSGGA-KVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNG  735 (1878)
T ss_dssp             EESCCTTSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSS
T ss_pred             EECCCCcHHHHHHHHHHHHCCC-EEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcc
Confidence            7999999 99999999999955 56666 57666665443322    1         28999999999999999998   


Q ss_pred             cC-CCcEEEEccCCcccc-CCCCCC--hhHHHHHHHHhhhhHHHHHHH--hcccccCC--ceEEEecCCCccccccchHH
Q psy7994          63 HG-GVDVLVNNAAIAFKV-NSSEPF--GSQALHTMRTNYFALIDVCDI--LFPLLRSH--GRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        63 ~~-~id~lv~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~g~~~l~~~--~~~~l~~~--g~ii~~sS~~~~~~~~~~~~  134 (230)
                      +| +||+||||||+.... ++.+.+  .+.|+++|++|+.|++.+++.  +++.|+++  ++||++||.++..       
T Consensus       736 ~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~-------  808 (1878)
T 2uv9_A          736 LGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF-------  808 (1878)
T ss_dssp             CCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS-------
T ss_pred             cCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc-------
Confidence            89 999999999997766 778888  799999999999999999987  66777544  7999999998854       


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHH-hhhhhhccCCeEEEEecCCccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHA-LLSQDAIREDLVVNCVHPGYVN  213 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~-~~~~~~~~~~i~v~~v~pG~v~  213 (230)
                                                       +  +...|++||+++.+|++.++. +++..     |+||+|+||+++
T Consensus       809 ---------------------------------g--g~~aYaASKAAL~aLt~~laAeEla~~-----IrVNaVaPG~V~  848 (1878)
T 2uv9_A          809 ---------------------------------G--NDGLYSESKLALETLFNRWYSESWGNY-----LTICGAVIGWTR  848 (1878)
T ss_dssp             ---------------------------------S--CCSSHHHHHHHHTTHHHHHHHSTTTTT-----EEEEEEEECCBC
T ss_pred             ---------------------------------C--CchHHHHHHHHHHHHHHHHHHHHcCCC-----eEEEEEEeccee
Confidence                                             2  247899999999999887655 46654     889999999999


Q ss_pred             -cCCCC
Q psy7994         214 -TDMSS  218 (230)
Q Consensus       214 -t~~~~  218 (230)
                       |+|..
T Consensus       849 gT~m~~  854 (1878)
T 2uv9_A          849 GTGLMS  854 (1878)
T ss_dssp             CTTSCS
T ss_pred             cCcccc
Confidence             99864

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.92  E-value=2.2e-25  Score=182.24  Aligned_cols=184  Identities=21%  Similarity=0.204  Sum_probs=135.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+||||++++++|+++ +..|++++|++++++.   . ..+|++++++++++++++   .+++|+||||||....  
T Consensus         6 VtGasg~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~---~-~~~D~~~~~~~~~~~~~~---~~~~d~vi~~Ag~~~~--   75 (255)
T 2dkn_A            6 ITGSASGIGAALKELLARA-GHTVIGIDRGQADIEA---D-LSTPGGRETAVAAVLDRC---GGVLDGLVCCAGVGVT--   75 (255)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSSSSEEC---C-TTSHHHHHHHHHHHHHHH---TTCCSEEEECCCCCTT--
T ss_pred             EeCCCcHHHHHHHHHHHhC-CCEEEEEeCChhHccc---c-ccCCcccHHHHHHHHHHc---CCCccEEEECCCCCCc--
Confidence            7999999999999999999 5678888898765432   1 348999999999988865   3689999999997531  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                           .+.+++.+++|+.+++.+++++++.|++.  ++||++||..++..............  ..+.+....+...   
T Consensus        76 -----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---  145 (255)
T 2dkn_A           76 -----AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAML--AGDEARAIELAEQ---  145 (255)
T ss_dssp             -----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHH--HTCHHHHHHHHHH---
T ss_pred             -----chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhc--ccchhhhhhhccc---
Confidence                 24589999999999999999999988654  89999999988653311100000000  0000000000000   


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                               ...+...|+.+|++++.+++.++.++...    |+++++|.||++.|++.
T Consensus       146 ---------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~----gi~v~~v~pg~v~~~~~  191 (255)
T 2dkn_A          146 ---------QGQTHLAYAGSKYAVTCLARRNVVDWAGR----GVRLNVVAPGAVETPLL  191 (255)
T ss_dssp             ---------HCCHHHHHHHHHHHHHHHHHHTHHHHHHT----TCEEEEEEECCBCSHHH
T ss_pred             ---------cCCcchhHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEcCCcccchhh
Confidence                     01244799999999999999999999876    78899999999999864

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.90  E-value=5.7e-23  Score=184.58  Aligned_cols=165  Identities=19%  Similarity=0.178  Sum_probs=137.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+||||++++++|+++|..+|++++|+..   .+++..+++.         .||++|++++++++++     +++|+
T Consensus       264 ITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-----~~ld~  338 (511)
T 2z5l_A          264 ITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-----YPPNA  338 (511)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-----SCCSE
T ss_pred             EECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-----CCCcE
Confidence            79999999999999999997768999999864   3444444433         2899999999999886     68999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||||+.....+.+.+.+.+++++++|+.|++++.+.+.+. ++.++||++||.++.+                     
T Consensus       339 VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~~~---------------------  396 (511)
T 2z5l_A          339 VFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTGTW---------------------  396 (511)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGGTT---------------------
T ss_pred             EEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHhcC---------------------
Confidence            999999988777888899999999999999999999987643 3458999999998844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc-ccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV-NTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v-~t~~~~~  219 (230)
                                         +..++..|+++|++++.|++.+    +..    |+++++|+||++ +|+|...
T Consensus       397 -------------------g~~g~~~YaaaKa~ld~la~~~----~~~----gi~v~sv~pG~~~~tgm~~~  441 (511)
T 2z5l_A          397 -------------------GNAGQGAYAAANAALDALAERR----RAA----GLPATSVAWGLWGGGGMAAG  441 (511)
T ss_dssp             -------------------CCTTBHHHHHHHHHHHHHHHHH----HTT----TCCCEEEEECCBCSTTCCCC
T ss_pred             -------------------CCCCCHHHHHHHHHHHHHHHHH----HHc----CCcEEEEECCcccCCccccc
Confidence                               4556789999999999998754    333    678999999999 8888753

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.90  E-value=1.8e-23  Score=186.94  Aligned_cols=164  Identities=19%  Similarity=0.191  Sum_probs=135.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+||||++++++|+++|..+|++++|+..   ..++..+++.         .||++|+++++++++++ ..+++||+
T Consensus       231 ITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~~g~ld~  309 (486)
T 2fr1_A          231 VTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GDDVPLSA  309 (486)
T ss_dssp             EETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CTTSCEEE
T ss_pred             EECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-HhcCCCcE
Confidence            79999999999999999997767999999864   3344433332         28999999999999998 56789999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||||......+.+.+.+.+++++++|+.|++.+.+++.+.  +.++||++||..+..                     
T Consensus       310 VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~~~---------------------  366 (486)
T 2fr1_A          310 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAF---------------------  366 (486)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHT---------------------
T ss_pred             EEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHhcC---------------------
Confidence            999999987777888899999999999999999999988652  458999999988743                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                         +.+++..|+++|++++.|++.    ++..    |+++++|+||++.++
T Consensus       367 -------------------g~~g~~~Yaaaka~l~~la~~----~~~~----gi~v~~i~pG~~~~~  406 (486)
T 2fr1_A          367 -------------------GAPGLGGYAPGNAYLDGLAQQ----RRSD----GLPATAVAWGTWAGS  406 (486)
T ss_dssp             -------------------CCTTCTTTHHHHHHHHHHHHH----HHHT----TCCCEEEEECCBC--
T ss_pred             -------------------CCCCCHHHHHHHHHHHHHHHH----HHhc----CCeEEEEECCeeCCC
Confidence                               445668999999999988653    4444    677999999999876

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.88  E-value=1.8e-22  Score=207.61  Aligned_cols=171  Identities=16%  Similarity=0.139  Sum_probs=132.4

Q ss_pred             CCCCCCc-HHHHHHHHHHHhcCCeEEEEecCcch-----hHHHHHhhhc---------ccCCCHHHHHHHHHHHHh----
Q psy7994           1 VTGANKG-IGYGIVKGLIQQFDGIIYLTARDASR-----GQEALEKLQK---------LDILDKNSIKALHDHLEA----   61 (230)
Q Consensus         1 ItG~s~g-iG~~~a~~la~~g~~~vi~~~r~~~~-----~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~----   61 (230)
                      ||||++| ||+++|+.|+++ +..|++++|+.+.     +++..+++..         +|++|+++++++++++.+    
T Consensus      2141 VTGAs~GsIG~AiA~~La~~-GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~ 2219 (3089)
T 3zen_D         2141 VTGASKGSIAASVVGQLLDG-GATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTE 2219 (3089)
T ss_dssp             EESCCTTSHHHHHHHHHHHT-TCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEE
T ss_pred             EeCCChhHHHHHHHHHHHHC-CCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhh
Confidence            7999999 999999999999 5678888887766     5555555432         899999999999999998    


Q ss_pred             hcCCCcEEEEccCCc----cc-cCCCCCChhHHHH----HHHHhhhhHHHHHHHhcccccCCc------eEEEecCCCcc
Q psy7994          62 EHGGVDVLVNNAAIA----FK-VNSSEPFGSQALH----TMRTNYFALIDVCDILFPLLRSHG------RVVNVSSSCGH  126 (230)
Q Consensus        62 ~~~~id~lv~~ag~~----~~-~~~~~~~~~~~~~----~~~~n~~g~~~l~~~~~~~l~~~g------~ii~~sS~~~~  126 (230)
                      .+|+||+||||||..    .. ....+.+.++|++    .+++|+.+.+.+++.+.+.|+..+      .|++.++..+.
T Consensus      2220 ~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~ 2299 (3089)
T 3zen_D         2220 SLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRGM 2299 (3089)
T ss_dssp             EESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTTS
T ss_pred             hcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCccccc
Confidence            899999999999982    11 2223334444544    499999999999999999886431      33344443331


Q ss_pred             ccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHh--hhhhhccCCeEE
Q psy7994         127 LCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHAL--LSQDAIREDLVV  204 (230)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~--~~~~~~~~~i~v  204 (230)
                                                                ..+...|++||+|+.+|+++++.|  ++.     +|+|
T Consensus      2300 ------------------------------------------~g~~~aYsASKaAl~~LtrslA~E~~~a~-----~IrV 2332 (3089)
T 3zen_D         2300 ------------------------------------------FGGDGAYGEAKSALDALENRWSAEKSWAE-----RVSL 2332 (3089)
T ss_dssp             ------------------------------------------CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-----TEEE
T ss_pred             ------------------------------------------CCCchHHHHHHHHHHHHHHHHHhccccCC-----CeEE
Confidence                                                      113368999999999999999999  665     3999


Q ss_pred             EEecCCccc-cCCCCC
Q psy7994         205 NCVHPGYVN-TDMSSG  219 (230)
Q Consensus       205 ~~v~pG~v~-t~~~~~  219 (230)
                      |+|+||+|+ |++...
T Consensus      2333 n~v~PG~v~tT~l~~~ 2348 (3089)
T 3zen_D         2333 AHALIGWTKGTGLMGQ 2348 (3089)
T ss_dssp             EEEECCCEECSTTTTT
T ss_pred             EEEeecccCCCccccc
Confidence            999999998 777543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.87  E-value=4.4e-22  Score=164.66  Aligned_cols=164  Identities=18%  Similarity=0.175  Sum_probs=123.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+||||++++++|+++ +..|++++|++.+.......+..+|++|+++++++++       ++|+||||||..    
T Consensus         8 VTGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~vi~~Ag~~----   75 (267)
T 3rft_A            8 VTGAAGQLGRVMRERLAPM-AEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVA-------GCDGIVHLGGIS----   75 (267)
T ss_dssp             EESTTSHHHHHHHHHTGGG-EEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCC----
T ss_pred             EECCCCHHHHHHHHHHHhc-CCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHc-------CCCEEEECCCCc----
Confidence            7999999999999999999 5688889998765542222233489999999998886       799999999983    


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                          +.+.|++++++|+.|++.+++++.+  ...++||++||..++......                            
T Consensus        76 ----~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~iv~~SS~~~~g~~~~~----------------------------  121 (267)
T 3rft_A           76 ----VEKPFEQILQGNIIGLYNLYEAARA--HGQPRIVFASSNHTIGYYPQT----------------------------  121 (267)
T ss_dssp             ----SCCCHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGGGTTSBTT----------------------------
T ss_pred             ----CcCCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcchHHhCCCCCC----------------------------
Confidence                3456899999999999999999953  234799999998875321100                            


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                      ...++..+..+...|+.||++.+.+++.++.+++.       ++++|.||.+.+++.
T Consensus       122 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~-------~~~~vr~~~v~~~~~  171 (267)
T 3rft_A          122 ERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQ-------ETALVRIGSCTPEPN  171 (267)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC-------CEEEEEECBCSSSCC
T ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCC-------eEEEEEeecccCCCC
Confidence            01122345566789999999999999999877543       366666666655543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.84  E-value=6.5e-21  Score=195.90  Aligned_cols=163  Identities=14%  Similarity=0.080  Sum_probs=121.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH---HHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ---EALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~---~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||+++|+.|+++|..+|++++|+..+.+   ...+++.         .||++|+++++++++++.+ +++||+
T Consensus      1889 ITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~-~g~id~ 1967 (2512)
T 2vz8_A         1889 ITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ-LGPVGG 1967 (2512)
T ss_dssp             EESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-HSCEEE
T ss_pred             EECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-cCCCcE
Confidence            79999999999999999997777999999876543   2333322         2899999999999999874 799999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||||+.....+.+.+.++|++++++|+.|++++.+++.+.|++.++||++||.++..                     
T Consensus      1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~--------------------- 2026 (2512)
T 2vz8_A         1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR--------------------- 2026 (2512)
T ss_dssp             EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT---------------------
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC---------------------
Confidence            99999998778888999999999999999999999999999887779999999998843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV  212 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v  212 (230)
                                         +.+++..|+++|+++++|++.++.+        |+...++.+|.+
T Consensus      2027 -------------------g~~g~~~Y~aaKaal~~l~~~rr~~--------Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2027 -------------------GNAGQANYGFANSAMERICEKRRHD--------GLPGLAVQWGAI 2063 (2512)
T ss_dssp             -------------------TCTTCHHHHHHHHHHHHHHHHHHHT--------TSCCCEEEECCB
T ss_pred             -------------------CCCCcHHHHHHHHHHHHHHHHHHHC--------CCcEEEEEccCc
Confidence                               4556789999999999999865543        233555665554

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.82  E-value=2.7e-19  Score=153.37  Aligned_cols=177  Identities=10%  Similarity=-0.038  Sum_probs=131.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchh------------HHHHHhhhc---------ccCCCHHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRG------------QEALEKLQK---------LDILDKNSIKALHDHL   59 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~------------~~~~~~~~~---------~D~s~~~~v~~~~~~~   59 (230)
                      |||||+|||++++..|+.+.+..++++.+..+..            ....+.+++         ||++++++++++++++
T Consensus        55 VtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i  134 (401)
T 4ggo_A           55 VLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEA  134 (401)
T ss_dssp             EESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             EECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHH
Confidence            7999999999999999943355666666644321            122233322         9999999999999999


Q ss_pred             HhhcCCCcEEEEccCCccccC-------------C---------------------CCCChhHHHHHHHH---hhhhHHH
Q psy7994          60 EAEHGGVDVLVNNAAIAFKVN-------------S---------------------SEPFGSQALHTMRT---NYFALID  102 (230)
Q Consensus        60 ~~~~~~id~lv~~ag~~~~~~-------------~---------------------~~~~~~~~~~~~~~---n~~g~~~  102 (230)
                      .+.+|+||+||||++......             +                     ...+.++++.+..+   ..++.|.
T Consensus       135 ~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s~w~  214 (401)
T 4ggo_A          135 KKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDWERWI  214 (401)
T ss_dssp             HHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHHHHH
T ss_pred             HHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhHHHHHH
Confidence            999999999999999863210             0                     11234555555544   5556667


Q ss_pred             HHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHH
Q psy7994         103 VCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGV  182 (230)
Q Consensus       103 l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  182 (230)
                      .++...++|.+++++|.+|++++....+                                      ......++++|++|
T Consensus       215 ~al~~a~lla~G~siva~SYiGse~t~P--------------------------------------~Y~~G~mG~AKaaL  256 (401)
T 4ggo_A          215 KQLSKEGLLEEGCITLAYSYIGPEATQA--------------------------------------LYRKGTIGKAKEHL  256 (401)
T ss_dssp             HHHHHTTCEEEEEEEEEEECCCCGGGHH--------------------------------------HHTTSHHHHHHHHH
T ss_pred             HHHHhhhcccCCceEEEEeccCcceeec--------------------------------------CCCccHHHHHHHHH
Confidence            7788888999999999999988844221                                      11235789999999


Q ss_pred             HHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         183 TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       183 ~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                      +..++.|+.++++      ++++++.||.+.|..+..++
T Consensus       257 Ea~~r~La~eL~~------~~a~v~v~~a~vT~AssaIP  289 (401)
T 4ggo_A          257 EATAHRLNKENPS------IRAFVSVNKGLVTRASAVIP  289 (401)
T ss_dssp             HHHHHHHHHHCTT------EEEEEEECCCCCCTTGGGSS
T ss_pred             HHHHHHHHHhcCC------CcEEEEEcCccccchhhcCC
Confidence            9999999999874      67999999999999877654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.80  E-value=2.3e-19  Score=145.39  Aligned_cols=150  Identities=18%  Similarity=0.132  Sum_probs=116.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH----hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~----~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+|+||++++++|+++ +..|++++|++++++....    .+..+|++         +.+.+.++++|+||||||..
T Consensus        26 VtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~---------~~~~~~~~~~D~vi~~ag~~   95 (236)
T 3e8x_A           26 VVGANGKVARYLLSELKNK-GHEPVAMVRNEEQGPELRERGASDIVVANLE---------EDFSHAFASIDAVVFAAGSG   95 (236)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHTTCSEEEECCTT---------SCCGGGGTTCSEEEECCCCC
T ss_pred             EECCCChHHHHHHHHHHhC-CCeEEEEECChHHHHHHHhCCCceEEEcccH---------HHHHHHHcCCCEEEECCCCC
Confidence            7999999999999999999 5689999999888776543    33347988         33444556899999999975


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      .        .+.+++.+++|+.+++.+++++..  ...++||++||.++.....                          
T Consensus        96 ~--------~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~~~~~~--------------------------  139 (236)
T 3e8x_A           96 P--------HTGADKTILIDLWGAIKTIQEAEK--RGIKRFIMVSSVGTVDPDQ--------------------------  139 (236)
T ss_dssp             T--------TSCHHHHHHTTTHHHHHHHHHHHH--HTCCEEEEECCTTCSCGGG--------------------------
T ss_pred             C--------CCCccccchhhHHHHHHHHHHHHH--cCCCEEEEEecCCCCCCCC--------------------------
Confidence            2        256889999999999999999843  2347999999976643110                          


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                .+ .+...|+.+|.+++.+++       ..    |++++.+.||++.++...
T Consensus       140 ----------~~-~~~~~Y~~sK~~~e~~~~-------~~----gi~~~~lrpg~v~~~~~~  179 (236)
T 3e8x_A          140 ----------GP-MNMRHYLVAKRLADDELK-------RS----SLDYTIVRPGPLSNEEST  179 (236)
T ss_dssp             ----------SC-GGGHHHHHHHHHHHHHHH-------HS----SSEEEEEEECSEECSCCC
T ss_pred             ----------Ch-hhhhhHHHHHHHHHHHHH-------HC----CCCEEEEeCCcccCCCCC
Confidence                      00 245899999999998874       22    789999999999998654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.80  E-value=3.3e-19  Score=152.71  Aligned_cols=156  Identities=21%  Similarity=0.242  Sum_probs=125.6

Q ss_pred             CCCCCCcHHHHHHHHHHHh-cCCeEEEEecCcchhHHHHHhhh-------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g~~~vi~~~r~~~~~~~~~~~~~-------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|+||++++++|+++ |...|++++|++.+.....+.+.       .+|++|.+++.++++       ++|+|||+
T Consensus        26 VTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~D~Vih~   98 (344)
T 2gn4_A           26 ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE-------GVDICIHA   98 (344)
T ss_dssp             EETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT-------TCSEEEEC
T ss_pred             EECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh-------cCCEEEEC
Confidence            7999999999999999999 77689999998877766554432       289999999888764       79999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ||.....    .......+.+++|+.|+..+++++.+.  ..++||++||..+..                         
T Consensus        99 Aa~~~~~----~~~~~~~~~~~~Nv~gt~~l~~aa~~~--~v~~~V~~SS~~~~~-------------------------  147 (344)
T 2gn4_A           99 AALKHVP----IAEYNPLECIKTNIMGASNVINACLKN--AISQVIALSTDKAAN-------------------------  147 (344)
T ss_dssp             CCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEECCGGGSS-------------------------
T ss_pred             CCCCCCC----chhcCHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEecCCccCC-------------------------
Confidence            9975311    122345689999999999999999763  346999999865421                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                        |...|+.||++.+.+++.++.++...    |++++++.||.+-++.
T Consensus       148 ------------------p~~~Y~~sK~~~E~~~~~~~~~~~~~----g~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          148 ------------------PINLYGATKLCSDKLFVSANNFKGSS----QTQFSVVRYGNVVGSR  189 (344)
T ss_dssp             ------------------CCSHHHHHHHHHHHHHHHGGGCCCSS----CCEEEEECCCEETTCT
T ss_pred             ------------------CccHHHHHHHHHHHHHHHHHHHhCCC----CcEEEEEEeccEECCC
Confidence                              34799999999999999988877655    7889999999988754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.79  E-value=1.1e-19  Score=147.47  Aligned_cols=148  Identities=16%  Similarity=0.062  Sum_probs=114.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHH-Hh--hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEAL-EK--LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~-~~--~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+||||++++++|+++|.. .|++++|++++++... ..  +..+|++|+++++++++       ++|+||||||..
T Consensus        23 VtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~ag~~   95 (242)
T 2bka_A           23 ILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQ-------GHDVGFCCLGTT   95 (242)
T ss_dssp             EECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGS-------SCSEEEECCCCC
T ss_pred             EECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhc-------CCCEEEECCCcc
Confidence            7999999999999999999542 8888888876543221 11  22389999998877664       799999999975


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      ..       .+.+++.+++|+.+++.+++++.+  ...++||++||..++.                             
T Consensus        96 ~~-------~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~iv~~SS~~~~~-----------------------------  137 (242)
T 2bka_A           96 RG-------KAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSKGADK-----------------------------  137 (242)
T ss_dssp             HH-------HHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTCCT-----------------------------
T ss_pred             cc-------cCCcccceeeeHHHHHHHHHHHHH--CCCCEEEEEccCcCCC-----------------------------
Confidence            22       245788999999999999998753  2347999999987742                             


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCe-EEEEecCCccccCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDL-VVNCVHPGYVNTDMS  217 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i-~v~~v~pG~v~t~~~  217 (230)
                                   .+...|+.+|++++.+++.+           ++ ++++|.||++.|++.
T Consensus       138 -------------~~~~~Y~~sK~~~e~~~~~~-----------~~~~~~~vrpg~v~~~~~  175 (242)
T 2bka_A          138 -------------SSNFLYLQVKGEVEAKVEEL-----------KFDRYSVFRPGVLLCDRQ  175 (242)
T ss_dssp             -------------TCSSHHHHHHHHHHHHHHTT-----------CCSEEEEEECCEEECTTG
T ss_pred             -------------CCcchHHHHHHHHHHHHHhc-----------CCCCeEEEcCceecCCCC
Confidence                         12368999999999988643           24 599999999999863

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.79  E-value=5.9e-19  Score=149.90  Aligned_cols=175  Identities=17%  Similarity=0.112  Sum_probs=128.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH-HHHHh--------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ-EALEK--------LQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~-~~~~~--------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||.+++++|+++ ++.|++++|+.++.+ ...+.        +..+|++|++++.++++.+     ++|+|||
T Consensus         8 VtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih   81 (345)
T 2z1m_A            8 ITGIRGQDGAYLAKLLLEK-GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QPDEVYN   81 (345)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            7999999999999999999 568888888776532 11222        2238999999999998876     7999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |||....    +.+.+.++..+++|+.+++.+++++.+ +...++||++||...+......                   
T Consensus        82 ~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~~~~~~iv~~SS~~vyg~~~~~-------------------  137 (345)
T 2z1m_A           82 LAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRT-VKPDTKFYQASTSEMFGKVQEI-------------------  137 (345)
T ss_dssp             CCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH-HCTTCEEEEEEEGGGGCSCSSS-------------------
T ss_pred             CCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEEechhhcCCCCCC-------------------
Confidence            9997521    123456889999999999999999974 2223799999998654321100                   


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                ..++..+..+...|+.+|.+.+.+++.++.++...... ++.++.+.||...|.+
T Consensus       138 ----------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~-~r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          138 ----------PQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACS-GILFNHESPLRGIEFV  191 (345)
T ss_dssp             ----------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEE-EEECCEECTTSCTTSH
T ss_pred             ----------CCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEe-eeeeeecCCCCCCcch
Confidence                      00122344566899999999999999999887632111 3567888999877654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.79  E-value=4.3e-19  Score=149.65  Aligned_cols=172  Identities=19%  Similarity=0.107  Sum_probs=126.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||++++++|+++ +..|++++|+... +...-.+..+|++|+++++++++.     +++|+||||||....  
T Consensus        17 VTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~-~~l~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~--   87 (321)
T 2pk3_A           17 ITGVAGFVGKYLANHLTEQ-NVEVFGTSRNNEA-KLPNVEMISLDIMDSQRVKKVISD-----IKPDYIFHLAAKSSV--   87 (321)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCTTC-CCTTEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCH--
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEecCCcc-ccceeeEEECCCCCHHHHHHHHHh-----cCCCEEEEcCcccch--
Confidence            7999999999999999999 5678888887654 211011224899999999998875     379999999997532  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                        ..+.+.++..+++|+.|+..+++++ +.+...++||++||.+.+......                           .
T Consensus        88 --~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~~~~~iv~~SS~~v~g~~~~~---------------------------~  137 (321)
T 2pk3_A           88 --KDSWLNKKGTFSTNVFGTLHVLDAV-RDSNLDCRILTIGSSEEYGMILPE---------------------------E  137 (321)
T ss_dssp             --HHHTTCHHHHHHHHHHHHHHHHHHH-HHHTCCCEEEEEEEGGGTBSCCGG---------------------------G
T ss_pred             --hhhhhcHHHHHHHHHHHHHHHHHHH-HHhCCCCeEEEEccHHhcCCCCCC---------------------------C
Confidence              1233467899999999999999999 555446899999998764321000                           0


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                      ..-++..+..+...|+.+|.+.+.+++.++.++       |++++.+.||.+-++...
T Consensus       138 ~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          138 SPVSEENQLRPMSPYGVSKASVGMLARQYVKAY-------GMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             CSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECTTCC
T ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc-------CCCEEEEEeCcccCcCCC
Confidence            001122234456899999999999999888652       577999999999887643

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.78  E-value=2.2e-18  Score=147.51  Aligned_cols=174  Identities=16%  Similarity=0.024  Sum_probs=130.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh--------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK--------LQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~--------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|+||.+++++|+++ +..|++++|+..........        +..+|++|++++.++++.+     ++|+||||
T Consensus        14 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~   87 (357)
T 1rkx_A           14 VTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QPEIVFHM   87 (357)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EECCCchHHHHHHHHHHhC-CCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CCCEEEEC
Confidence            7999999999999999999 56888888877654333222        2238999999999998865     79999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ||...    ...+.+.++..+++|+.++..+++++.+. ...++||++||...+......                    
T Consensus        88 A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~vyg~~~~~--------------------  142 (357)
T 1rkx_A           88 AAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV-GGVKAVVNITSDKCYDNKEWI--------------------  142 (357)
T ss_dssp             CSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCCEEEEECCGGGBCCCCSS--------------------
T ss_pred             CCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEecCHHHhCCCCcC--------------------
Confidence            99631    11234667889999999999999999752 235799999998764321100                    


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh------hhhccCCeEEEEecCCccccCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS------QDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~------~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                              ...++..+..+...|+.+|.+.+.+++.++.++.      ..    |++++.+.||.+-++..
T Consensus       143 --------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~----gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          143 --------WGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQH----GTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             --------SCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHH----CCEEEEEECCCEECTTC
T ss_pred             --------CCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccC----CceEEEEeeceeeCCCC
Confidence                    0001122344568999999999999999998874      33    68899999999988753

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.78  E-value=2.1e-18  Score=146.60  Aligned_cols=169  Identities=17%  Similarity=0.096  Sum_probs=125.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----------hcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----------QKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----------~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||++++++|+++ ++.|++++|+........+.+          ..+|++|++++++++++     +++|+||
T Consensus        10 VTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vi   83 (341)
T 3enk_A           10 VTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HPITAAI   83 (341)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SCCCEEE
T ss_pred             EecCCcHHHHHHHHHHHHC-CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cCCcEEE
Confidence            7999999999999999999 567888888766554443332          13899999999999886     4899999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||||.....    ...+...+.+++|+.+++.+++++..  ...++||++||.+.+..+...                  
T Consensus        84 h~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~~g~~~~~------------------  139 (341)
T 3enk_A           84 HFAALKAVG----ESVAKPIEYYRNNLDSLLSLLRVMRE--RAVKRIVFSSSATVYGVPERS------------------  139 (341)
T ss_dssp             ECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGGBCSCSSS------------------
T ss_pred             ECccccccC----ccccChHHHHHHHHHHHHHHHHHHHh--CCCCEEEEEecceEecCCCCC------------------
Confidence            999985321    12344567899999999999988743  233699999997765322111                  


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                 ..++..+..+...|+.+|.+.+.+++.++.++.      +++++.+.|+.+-.+.
T Consensus       140 -----------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~------~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          140 -----------PIDETFPLSATNPYGQTKLMAEQILRDVEAADP------SWRVATLRYFNPVGAH  188 (341)
T ss_dssp             -----------SBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT------TCEEEEEEECEEECCC
T ss_pred             -----------CCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC------CceEEEEeeccccCCc
Confidence                       012233445668999999999999999887764      2668888888876553

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.78  E-value=1.2e-18  Score=149.23  Aligned_cols=182  Identities=14%  Similarity=0.089  Sum_probs=127.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc--chhHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA--SRGQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~--~~~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||++++++|+++++..|++++|..  ...+...+       .+..+|++|++++.+++++.     ++|+|||
T Consensus         5 VTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih   79 (361)
T 1kew_A            5 ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDAVMH   79 (361)
T ss_dssp             EESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCCEEEE
Confidence            7999999999999999998556888888754  22222111       11238999999999998763     7999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-C------ceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-H------GRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~------g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |||....    +.+.+.+++.+++|+.|++.+++++.+.|+. +      ++||++||...+.......    ...... 
T Consensus        80 ~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~----~~~~~~-  150 (361)
T 1kew_A           80 LAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPD----EVENSV-  150 (361)
T ss_dssp             CCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGG----GSCTTS-
T ss_pred             CCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccc----cccccc-
Confidence            9997531    1234567889999999999999999987643 2      4999999976432111000    000000 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                      +              ...-++..+..+...|+.+|.+.+.+++.++.++       |++++.+.||.+-++..
T Consensus       151 ~--------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          151 T--------------LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY-------GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             C--------------CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEESTTC
T ss_pred             c--------------CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-------CCcEEEEeeceeECCCC
Confidence            0              0000122244566899999999999999988765       35699999999988875

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.77  E-value=7.3e-18  Score=143.34  Aligned_cols=186  Identities=10%  Similarity=-0.012  Sum_probs=126.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHHh--------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEK--------LQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~~--------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||++++++|+++ +..|++++|.. .........        +..+|++|+++++++++..     ++|+|||
T Consensus         6 VTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih   79 (347)
T 1orr_A            6 ITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSCFH   79 (347)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EeCCCchhHHHHHHHHHhC-CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCEEEE
Confidence            7999999999999999999 56777777743 222221221        1238999999999998763     7999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhc-hhHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEI-KSVEELS  150 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  150 (230)
                      |||....    +.+.+.++..+++|+.++..+++++.+... .++||++||.+.+......+      ..+. ..|... 
T Consensus        80 ~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~------~~e~~~~~~~~-  147 (347)
T 1orr_A           80 LAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS-NCNIIYSSTNKVYGDLEQYK------YNETETRYTCV-  147 (347)
T ss_dssp             CCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEEGGGGTTCTTSC------EEECSSCEEET-
T ss_pred             CCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEeccHHHhCCCCcCC------ccccccccccc-
Confidence            9997421    123456788999999999999999987543 36999999976543211000      0000 000000 


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                             ......++..+..+...|+.+|.+.+.+++.++.++       |++++.+.||.+-++...
T Consensus       148 -------~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilrp~~v~g~~~~  201 (347)
T 1orr_A          148 -------DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF-------GLNTVVFRHSSMYGGRQF  201 (347)
T ss_dssp             -------TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEECTTCC
T ss_pred             -------ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh-------CCcEEEEccCceeCcCCC
Confidence                   000001122344466899999999999999888764       477999999999988653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.76  E-value=4.5e-18  Score=144.27  Aligned_cols=188  Identities=18%  Similarity=0.090  Sum_probs=126.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----------h-cccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----------Q-KLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----------~-~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||++++++|+++ +..|++++|+.++.+.....+          . .+|++|.++++++++       ++|+|
T Consensus        16 VTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v   87 (342)
T 1y1p_A           16 VTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAAGV   87 (342)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCSEE
T ss_pred             EECCccHHHHHHHHHHHHC-CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-------CCCEE
Confidence            7999999999999999999 568888899877655443221          2 479999988777654       79999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||||.....       +.+++.+++|+.++..+++++.+. ...++||++||...+..+.....  .....+. ++...
T Consensus        88 ih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~--~~~~~E~-~~~~~  156 (342)
T 1y1p_A           88 AHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVE--GIYLDEK-SWNLE  156 (342)
T ss_dssp             EECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCC--CCEECTT-CCCHH
T ss_pred             EEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHHhcCCCCCCC--CcccCcc-ccCch
Confidence            9999975321       346789999999999999998652 12379999999877532210000  0000000 00000


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                      ... ..+     ......+..+...|+.+|.+.+.+++.++.+++.     +++++++.||.+-+++..
T Consensus       157 ~~~-~~~-----~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-----~~~~~~~rp~~v~g~~~~  214 (342)
T 1y1p_A          157 SID-KAK-----TLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-----HFTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             HHH-HHH-----HSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-----SSEEEEEEESEEECCCSC
T ss_pred             hhh-hhc-----cccccccccchHHHHHHHHHHHHHHHHHHHhcCC-----CceEEEEcCCceECCCCC
Confidence            000 000     0000001223478999999999999999888754     478999999999988754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.75  E-value=3.6e-18  Score=144.84  Aligned_cols=169  Identities=18%  Similarity=0.082  Sum_probs=123.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCcc--hhHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDAS--RGQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~~--~~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||++++++|+++| +..|+..+|...  ..+...+       .+..+|++|++++++++.       ++|+||
T Consensus         8 VTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   80 (336)
T 2hun_A            8 VTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR-------KVDGVV   80 (336)
T ss_dssp             EETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH-------TCSEEE
T ss_pred             EECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh-------CCCEEE
Confidence            79999999999999999996 368888887541  1211110       112389999999988872       799999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||||....    +.+.+.++..+++|+.++..+++++.+. ...++||++||...+......                  
T Consensus        81 h~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~------------------  137 (336)
T 2hun_A           81 HLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDILKG------------------  137 (336)
T ss_dssp             ECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCSSS------------------
T ss_pred             ECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCCCC------------------
Confidence            99997531    1234567889999999999999999875 224799999997653321000                  


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                 .-++..+..+...|+.+|.+.+.+++.++.++       |++++.+.||.+-++..
T Consensus       138 -----------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          138 -----------SFTENDRLMPSSPYSATKAASDMLVLGWTRTY-------NLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             -----------CBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT-------TCEEEEEEECEEESTTC
T ss_pred             -----------CcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-------CCCEEEEeeeeeeCcCC
Confidence                       00112244556899999999999999888764       46799999999988864

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.75  E-value=5.3e-18  Score=137.78  Aligned_cols=162  Identities=17%  Similarity=0.058  Sum_probs=117.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCcchhHHHHH--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDASRGQEALE--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~~~~~~~~~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||++++++|+++| +..|++.+|++++++....  .+..+|++|+++++++++       ++|+||||+|...
T Consensus         9 VtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~   81 (253)
T 1xq6_A            9 VTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQ-------GIDALVILTSAVP   81 (253)
T ss_dssp             EESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred             EEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHc-------CCCEEEEeccccc
Confidence            79999999999999999996 5788899998766544311  123489999999988875       6999999999764


Q ss_pred             ccCC---------CCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          78 KVNS---------SEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        78 ~~~~---------~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ....         .+...+.+++.+++|+.++..+++++.+.  ..++||++||..+.......                
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~----------------  143 (253)
T 1xq6_A           82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTNPDHPL----------------  143 (253)
T ss_dssp             EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTCTTCGG----------------
T ss_pred             cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc--CCCEEEEEcCccCCCCCCcc----------------
Confidence            3211         22233455678999999999999988542  34699999998763210000                


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                         ...+...|..+|.+++.+++.       .    |++++.+.||.+.++..
T Consensus       144 -------------------~~~~~~~y~~sK~~~e~~~~~-------~----~i~~~~vrpg~v~~~~~  182 (253)
T 1xq6_A          144 -------------------NKLGNGNILVWKRKAEQYLAD-------S----GTPYTIIRAGGLLDKEG  182 (253)
T ss_dssp             -------------------GGGGGCCHHHHHHHHHHHHHT-------S----SSCEEEEEECEEECSCS
T ss_pred             -------------------ccccchhHHHHHHHHHHHHHh-------C----CCceEEEecceeecCCc
Confidence                               000113577899999887642       2    68899999999988864

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.74  E-value=2e-17  Score=143.46  Aligned_cols=176  Identities=14%  Similarity=0.129  Sum_probs=122.4

Q ss_pred             CCCCCCcHHHHHHHHHH-HhcCCeEEEEecCcch---------hHHHH---H---------h-----hhcccCCCHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLI-QQFDGIIYLTARDASR---------GQEAL---E---------K-----LQKLDILDKNSIK   53 (230)
Q Consensus         1 ItG~s~giG~~~a~~la-~~g~~~vi~~~r~~~~---------~~~~~---~---------~-----~~~~D~s~~~~v~   53 (230)
                      ||||+|+||.+++++|+ ++ ++.|++++|....         .+...   +         .     +..+|++|++++.
T Consensus         7 VTGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   85 (397)
T 1gy8_A            7 VCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLN   85 (397)
T ss_dssp             EETTTSHHHHHHHHHHHHHC-CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHH
T ss_pred             EECCCCHHHHHHHHHHHHhC-CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHH
Confidence            79999999999999999 88 5677778876543         23221   1         1     2238999999988


Q ss_pred             HHHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchH
Q psy7994          54 ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSE  133 (230)
Q Consensus        54 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~  133 (230)
                      +++++    ++++|+||||||.....    .+.+.++..+++|+.+++.+++++..  ...++||++||.+.+..+...+
T Consensus        86 ~~~~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~~~iv~~SS~~v~g~~~~~~  155 (397)
T 1gy8_A           86 GVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSAAIFGNPTMGS  155 (397)
T ss_dssp             HHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGGTBSCCC--
T ss_pred             HHHHh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHHH--hCCCEEEEECCHHHhCCCCccc
Confidence            88764    45699999999975321    13466788999999999999998753  1336999999965543221000


Q ss_pred             HHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc
Q psy7994         134 ALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN  213 (230)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~  213 (230)
                      .                      ......-++..+..+...|+.+|++.+.+++.++.++       |++++.+.|+.+-
T Consensus       156 ~----------------------~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------gi~~~ilRp~~v~  206 (397)
T 1gy8_A          156 V----------------------STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY-------GIKGICLRYFNAC  206 (397)
T ss_dssp             -------------------------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEE
T ss_pred             c----------------------cccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH-------CCcEEEEecccee
Confidence            0                      0000001122233456899999999999999988775       3669999999886


Q ss_pred             cCC
Q psy7994         214 TDM  216 (230)
Q Consensus       214 t~~  216 (230)
                      .+.
T Consensus       207 G~~  209 (397)
T 1gy8_A          207 GAH  209 (397)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            553

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.73  E-value=1e-17  Score=140.91  Aligned_cols=165  Identities=20%  Similarity=0.114  Sum_probs=121.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||+|+||.+++++|+++| ..|++..++....+....  .+..+|+++ +++.++++       ++|+|||+|+..  
T Consensus         6 VTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vih~a~~~--   74 (313)
T 3ehe_A            6 VTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLK-------GAEEVWHIAANP--   74 (313)
T ss_dssp             EETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHT-------TCSEEEECCCCC--
T ss_pred             EECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhc-------CCCEEEECCCCC--
Confidence            79999999999999999996 677776666544332211  122389998 88777765       799999999964  


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                        ....+.+.++..+++|+.++..+++++..  ...++||++||...+......                          
T Consensus        75 --~~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~iv~~SS~~vyg~~~~~--------------------------  124 (313)
T 3ehe_A           75 --DVRIGAENPDEIYRNNVLATYRLLEAMRK--AGVSRIVFTSTSTVYGEAKVI--------------------------  124 (313)
T ss_dssp             --CCC-CCCCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEECCGGGGCSCSSS--------------------------
T ss_pred             --ChhhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCchHHhCcCCCC--------------------------
Confidence              22345677889999999999999998753  234699999997765422111                          


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                         ..++..+..+...|+.+|.+.+.+++.++.++       |++++.+.|+.+-++.
T Consensus       125 ---~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~ilRp~~v~G~~  172 (313)
T 3ehe_A          125 ---PTPEDYPTHPISLYGASKLACEALIESYCHTF-------DMQAWIYRFANVIGRR  172 (313)
T ss_dssp             ---SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT-------TCEEEEEECSCEESTT
T ss_pred             ---CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-------CCCEEEEeeccccCcC
Confidence               01223355567899999999999999888765       3669999999987664

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.73  E-value=1.3e-17  Score=141.52  Aligned_cols=161  Identities=16%  Similarity=0.102  Sum_probs=114.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-----hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-----LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|+||++++++|+++ +..|++++|+........+.     +..+|++|.++++++++++     ++|+||||||.
T Consensus        25 VTGasG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~vih~A~~   98 (330)
T 2pzm_A           25 ITGGAGCLGSNLIEHWLPQ-GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF-----KPTHVVHSAAA   98 (330)
T ss_dssp             EETTTSHHHHHHHHHHGGG-TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc-----CCCEEEECCcc
Confidence            7999999999999999999 46788888865432211111     2238999999999998876     79999999998


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ....     +.++++  +++|+.+++.+++++..  ...++||++||.+.+......+        .+            
T Consensus        99 ~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~~~~~~~~~~~--------~~------------  149 (330)
T 2pzm_A           99 YKDP-----DDWAED--AATNVQGSINVAKAASK--AGVKRLLNFQTALCYGRPATVP--------IP------------  149 (330)
T ss_dssp             CSCT-----TCHHHH--HHHHTHHHHHHHHHHHH--HTCSEEEEEEEGGGGCSCSSSS--------BC------------
T ss_pred             CCCc-----cccChh--HHHHHHHHHHHHHHHHH--cCCCEEEEecCHHHhCCCccCC--------CC------------
Confidence            5321     345555  99999999999999873  2347999999987643211000        00            


Q ss_pred             HHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeE-EEEecCCc
Q psy7994         156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLV-VNCVHPGY  211 (230)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~-v~~v~pG~  211 (230)
                             -++..  .+...|+.+|++.+.+++.+  ++...    .+| .+.+.||.
T Consensus       150 -------~~E~~--~~~~~Y~~sK~~~e~~~~~~--~~~~~----~iR~~~v~gp~~  191 (330)
T 2pzm_A          150 -------IDSPT--APFTSYGISKTAGEAFLMMS--DVPVV----SLRLANVTGPRL  191 (330)
T ss_dssp             -------TTCCC--CCCSHHHHHHHHHHHHHHTC--SSCEE----EEEECEEECTTC
T ss_pred             -------cCCCC--CCCChHHHHHHHHHHHHHHc--CCCEE----EEeeeeeECcCC
Confidence                   00000  25589999999999999876  33333    466 67788885

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.72  E-value=7e-18  Score=139.01  Aligned_cols=162  Identities=18%  Similarity=0.118  Sum_probs=119.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||++++++|+++| ..|++++|++.+.......+..+|++|++++.++++       ++|+||||||..    
T Consensus         7 VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~----   74 (267)
T 3ay3_A            7 VTGAAGGVGSAIRPHLGTLA-HEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVK-------DCDGIIHLGGVS----   74 (267)
T ss_dssp             EESTTSHHHHHHGGGGGGTE-EEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHT-------TCSEEEECCSCC----
T ss_pred             EECCCCHHHHHHHHHHHhCC-CEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHc-------CCCEEEECCcCC----
Confidence            79999999999999999994 688888887653211011233489999999888875       699999999974    


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                          ..+.+++.+++|+.++..+++++.+  ...++||++||...+......                            
T Consensus        75 ----~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~~~~~~~~----------------------------  120 (267)
T 3ay3_A           75 ----VERPWNDILQANIIGAYNLYEAARN--LGKPRIVFASSNHTIGYYPRT----------------------------  120 (267)
T ss_dssp             ----SCCCHHHHHHHTHHHHHHHHHHHHH--TTCCEEEEEEEGGGSTTSBTT----------------------------
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCHHHhCCCCCC----------------------------
Confidence                2345788999999999999999864  234799999998764321100                            


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc-ccC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV-NTD  215 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v-~t~  215 (230)
                      ..-++..+..+...|+.+|.+++.+++.++.+   .    |++++.+.||.+ .++
T Consensus       121 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~----gi~~~~lrp~~v~~~~  169 (267)
T 3ay3_A          121 TRIDTEVPRRPDSLYGLSKCFGEDLASLYYHK---F----DIETLNIRIGSCFPKP  169 (267)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT---T----CCCEEEEEECBCSSSC
T ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---c----CCCEEEEeceeecCCC
Confidence            00011223445689999999999999877532   2    577999999997 554

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.72  E-value=1.3e-16  Score=138.52  Aligned_cols=185  Identities=13%  Similarity=0.026  Sum_probs=122.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH----------------HHHH--------h--hhcccCCCHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ----------------EALE--------K--LQKLDILDKNSIKA   54 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~----------------~~~~--------~--~~~~D~s~~~~v~~   54 (230)
                      ||||+|.||++++++|+++ +..|++++|......                +...        .  +..+|++|++++.+
T Consensus        16 VTG~tGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~   94 (404)
T 1i24_A           16 VIGGDGYCGWATALHLSKK-NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAE   94 (404)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHH
T ss_pred             EeCCCcHHHHHHHHHHHhC-CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHH
Confidence            7999999999999999999 457777776533211                0111        1  12389999999999


Q ss_pred             HHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCCccccccchH
Q psy7994          55 LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSCGHLCHVTSE  133 (230)
Q Consensus        55 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~~~~~~~~~~  133 (230)
                      +++..     ++|+||||||....... ..+++.+...+++|+.|+..+++++.+.  .. .+||++||.+.+...... 
T Consensus        95 ~~~~~-----~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~~~V~~SS~~vyg~~~~~-  165 (404)
T 1i24_A           95 SFKSF-----EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF--GEECHLVKLGTMGEYGTPNID-  165 (404)
T ss_dssp             HHHHH-----CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEECCGGGGCCCSSC-
T ss_pred             HHhcc-----CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh--CCCcEEEEeCcHHHhCCCCCC-
Confidence            88865     69999999997532211 1245667789999999999999998643  22 499999997654321100 


Q ss_pred             HHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc
Q psy7994         134 ALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN  213 (230)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~  213 (230)
                      .      .+.. +..       . ..........+..+...|+.||.+.+.+++.++.++       |++++++.||.+-
T Consensus       166 ~------~E~~-~~~-------~-~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------gi~~~ivrp~~v~  223 (404)
T 1i24_A          166 I------EEGY-ITI-------T-HNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-------GIRATDLNQGVVY  223 (404)
T ss_dssp             B------CSSE-EEE-------E-ETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEE
T ss_pred             C------Cccc-ccc-------c-cccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc-------CCeEEEEecceee
Confidence            0      0000 000       0 000000000134456899999999999998887654       4779999999998


Q ss_pred             cCCC
Q psy7994         214 TDMS  217 (230)
Q Consensus       214 t~~~  217 (230)
                      ++..
T Consensus       224 Gp~~  227 (404)
T 1i24_A          224 GVKT  227 (404)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            7753

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.72  E-value=4.7e-17  Score=139.07  Aligned_cols=168  Identities=17%  Similarity=0.043  Sum_probs=123.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc----hhHHHHHh----------hhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS----RGQEALEK----------LQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~----~~~~~~~~----------~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|+||++++++|+++ +..|++++|+..    .++...+.          +..+|++|.+++.++++       ++
T Consensus        32 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~  103 (352)
T 1sb8_A           32 ITGVAGFIGSNLLETLLKL-DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-------GV  103 (352)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-------TC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-------CC
Confidence            7999999999999999999 567888888653    23322211          12389999998888775       79


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |+|||+||.....    .+.+.++..+++|+.++..+++++.+.  ..++||++||...+......              
T Consensus       104 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~--------------  163 (352)
T 1sb8_A          104 DYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGL--------------  163 (352)
T ss_dssp             SEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCS--------------
T ss_pred             CEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCCCCC--------------
Confidence            9999999974311    134567889999999999999998652  34699999998764422100              


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                     ..++..+..+...|+.+|.+.+.+++.++.++       |++++.+.||.+-++...
T Consensus       164 ---------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          164 ---------------PKVEDTIGKPLSPYAVTKYVNELYADVFSRCY-------GFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             ---------------SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCCEEEEECCEECTTCC
T ss_pred             ---------------CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-------CCCEEEEEECceeCcCCC
Confidence                           00112233456899999999999999887764       355899999999887643

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.71  E-value=3.7e-17  Score=137.36  Aligned_cols=170  Identities=16%  Similarity=0.133  Sum_probs=120.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHH--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALE--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||++++++|+++ ++.|++++|... ..+....  .+..+|++|++++++++++.     ++|+|||+|+...
T Consensus         5 VTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~   78 (311)
T 2p5y_A            5 VTGGAGFIGSHIVEDLLAR-GLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREF-----RPTHVSHQAAQAS   78 (311)
T ss_dssp             EETTTSHHHHHHHHHHHTT-TCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             EEeCCcHHHHHHHHHHHHC-CCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhc-----CCCEEEECccccC
Confidence            7999999999999999999 557777777432 2211101  12348999999999888753     7999999999743


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccc-cchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCH-VTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      .    ..+.++++..+++|+.|++.+++++.+.  ..++||++||.++.+.. ...                        
T Consensus        79 ~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~~g~~~~~------------------------  128 (311)
T 2p5y_A           79 V----KVSVEDPVLDFEVNLLGGLNLLEACRQY--GVEKLVFASTGGAIYGEVPEG------------------------  128 (311)
T ss_dssp             H----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEHHHHHCCCCTT------------------------
T ss_pred             c----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCChhhcCCCCCC------------------------
Confidence            1    1234567889999999999999988531  23699999997332211 000                        


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                          ...++..+..+...|+.+|++.+.+++.++.++       |++++.+.|+.+-++..
T Consensus       129 ----~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          129 ----ERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY-------GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             ----CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEECTTC
T ss_pred             ----CCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc-------CCCEEEEeeccccCcCC
Confidence                000112233456899999999999999887664       36699999999887754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.71  E-value=5.2e-17  Score=138.35  Aligned_cols=179  Identities=17%  Similarity=0.062  Sum_probs=121.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCcch-hHHHHHh-------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDASR-GQEALEK-------LQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~~~-~~~~~~~-------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||.+++++|+++| +..|++++|.... .......       +..+|++|++++.++++       .+|+|||
T Consensus         9 VTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih   81 (348)
T 1oc2_A            9 VTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KADAIVH   81 (348)
T ss_dssp             EETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             EeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh-------cCCEEEE
Confidence            79999999999999999985 4578888875421 1111111       22389999999888875       5699999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |||....    ..+.+.++..+++|+.++..+++++.+.   +++||++||...+.......     +.....+      
T Consensus        82 ~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~v~~SS~~vyg~~~~~~-----~~~~~~~------  143 (348)
T 1oc2_A           82 YAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY---DIRFHHVSTDEVYGDLPLRE-----DLPGHGE------  143 (348)
T ss_dssp             CCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGGCCBCCGG-----GSTTTTC------
T ss_pred             CCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEecccceeCCCcccc-----ccccccc------
Confidence            9997531    1233567889999999999999999764   35999999976543211000     0000000      


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                            .....-++..+..+...|+.+|.+.+.+++.++.++       |++++.+.||.+-++..
T Consensus       144 ------~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------gi~~~ilrp~~v~G~~~  196 (348)
T 1oc2_A          144 ------GPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF-------GVKATISNCSNNYGPYQ  196 (348)
T ss_dssp             ------STTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEESTTC
T ss_pred             ------ccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-------CCCEEEEeeceeeCCCC
Confidence                  000001122344566899999999999999887764       46799999999988764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.71  E-value=2.5e-17  Score=142.28  Aligned_cols=171  Identities=18%  Similarity=0.032  Sum_probs=121.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-----hHHHH----------HhhhcccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-----GQEAL----------EKLQKLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-----~~~~~----------~~~~~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||+|+||.++++.|+++ +..|++++|+...     ++...          -.+..+|++|.+++.++++.+     +
T Consensus        33 VtGatG~IG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~  106 (381)
T 1n7h_A           33 ITGITGQDGSYLTEFLLGK-GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-----K  106 (381)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEcCCchHHHHHHHHHHHC-CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc-----C
Confidence            7999999999999999999 4678888887543     22211          112348999999999998876     7


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                      +|+||||||....    ..+.+.++..+++|+.++..+++++.+...+   .++||++||...+.....           
T Consensus       107 ~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-----------  171 (381)
T 1n7h_A          107 PDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-----------  171 (381)
T ss_dssp             CSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-----------
T ss_pred             CCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-----------
Confidence            9999999997532    1234668889999999999999999876532   469999999776432110           


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV  212 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v  212 (230)
                                         ..++..+..+...|+.+|.+.+.+++.++.+++..... ....+.+.||..
T Consensus       172 -------------------~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~-~r~~~~~gp~~~  221 (381)
T 1n7h_A          172 -------------------PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACN-GILFNHESPRRG  221 (381)
T ss_dssp             -------------------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEE-EEECCEECTTSC
T ss_pred             -------------------CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEE-EEeCceeCCCCC
Confidence                               00122244556899999999999999998876532111 123455566643

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.70  E-value=1.9e-17  Score=140.80  Aligned_cols=172  Identities=16%  Similarity=0.031  Sum_probs=122.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC------CeEEEEecCcchhHHH-HH--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD------GIIYLTARDASRGQEA-LE--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~------~~vi~~~r~~~~~~~~-~~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||.+++++|+++|.      ..|++++|+....... ..  .+..+|++|+++++++++      +++|+|||
T Consensus        19 VtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~~d~vih   92 (342)
T 2hrz_A           19 IIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVE------ARPDVIFH   92 (342)
T ss_dssp             EETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHH------TCCSEEEE
T ss_pred             EECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHh------cCCCEEEE
Confidence            799999999999999999952      6888888876433210 00  122389999999888875      37999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||....     .+.+.++..+++|+.|+..+++++.+..+   ..++||++||.+.+......                
T Consensus        93 ~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~----------------  151 (342)
T 2hrz_A           93 LAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY----------------  151 (342)
T ss_dssp             CCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS----------------
T ss_pred             CCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC----------------
Confidence            9997531     23467889999999999999999876432   14799999998765421100                


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEec--CCcccc
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVH--PGYVNT  214 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~--pG~v~t  214 (230)
                                   ..++..+..+...|+.+|.+.+.+++.++.+.....  ..+|++.|.  ||.+.+
T Consensus       152 -------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~--~~ir~~~v~g~pg~~~~  204 (342)
T 2hrz_A          152 -------------PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDG--IGIRLPTICIRPGKPNA  204 (342)
T ss_dssp             -------------SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEE--EEEEECEETTCCSSCCC
T ss_pred             -------------CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCc--eeEEeeeEEecCCCCcc
Confidence                         001223334568999999999999988877643221  136777777  887543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.70  E-value=9.7e-17  Score=136.64  Aligned_cols=168  Identities=14%  Similarity=0.053  Sum_probs=117.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch----------hHHHHH------hhhcccCCCHHHHHHHHHHHHhhcC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR----------GQEALE------KLQKLDILDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~----------~~~~~~------~~~~~D~s~~~~v~~~~~~~~~~~~   64 (230)
                      ||||+|+||.+++++|+++| ..|++++|....          ++....      .+..+|++|++++++++++.     
T Consensus         7 VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----   80 (348)
T 1ek6_A            7 VTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-----   80 (348)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-----
T ss_pred             EECCCCHHHHHHHHHHHHCC-CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-----
Confidence            79999999999999999995 567777664322          222111      12238999999998888752     


Q ss_pred             CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          65 GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        65 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      ++|+|||+||.....    .+.+.+++.+++|+.++..+++++..  ...++||++||...+..+...            
T Consensus        81 ~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~~g~~~~~------------  142 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSATVYGNPQYL------------  142 (348)
T ss_dssp             CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGGGCSCSSS------------
T ss_pred             CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHHHH--hCCCEEEEECcHHHhCCCCCC------------
Confidence            799999999975321    13456788999999999999998753  123699999997664321100            


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCC-CchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWP-NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                       .-++..+..+ ...|+.+|.+.+.+++.++.+ ..     ++++..+.|+.+-.+
T Consensus       143 -----------------~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~~-----~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          143 -----------------PLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-DK-----TWNAVLLRYFNPTGA  191 (348)
T ss_dssp             -----------------SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-CT-----TCEEEEEEECEEECC
T ss_pred             -----------------CcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-CC-----CcceEEEeeccccCC
Confidence                             0011222223 689999999999999998876 32     366888888766544

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.70  E-value=2.4e-17  Score=138.37  Aligned_cols=166  Identities=20%  Similarity=0.078  Sum_probs=122.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||.+++++|+++ +..|+.++|+........   -.+..+|++|.+ +.++++       . |+|||+||...
T Consensus         5 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vih~A~~~~   74 (312)
T 3ko8_A            5 VTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIK-------G-DVVFHFAANPE   74 (312)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCC-------C-SEEEECCSSCS
T ss_pred             EECCCChHHHHHHHHHHhC-CCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcC-------C-CEEEECCCCCC
Confidence            7999999999999999999 567888888665433221   122238999987 655443       3 99999999642


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                          ...+.+.++..+++|+.++..+++++..  ...++||++||...+..+...                         
T Consensus        75 ----~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~vyg~~~~~-------------------------  123 (312)
T 3ko8_A           75 ----VRLSTTEPIVHFNENVVATFNVLEWARQ--TGVRTVVFASSSTVYGDADVI-------------------------  123 (312)
T ss_dssp             ----SSGGGSCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGGGCSCSSS-------------------------
T ss_pred             ----chhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeCcHHHhCCCCCC-------------------------
Confidence                2345667889999999999999998853  233699999998765432111                         


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                          ..++..+..+...|+.+|.+.+.+++.++.++       |++++.+.||.+-++...
T Consensus       124 ----~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~~lrp~~v~g~~~~  173 (312)
T 3ko8_A          124 ----PTPEEEPYKPISVYGAAKAAGEVMCATYARLF-------GVRCLAVRYANVVGPRLR  173 (312)
T ss_dssp             ----SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECTTCC
T ss_pred             ----CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-------CCCEEEEeeccccCcCCC
Confidence                01123345567899999999999999888765       366999999999887643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.70  E-value=2.1e-16  Score=135.70  Aligned_cols=156  Identities=16%  Similarity=0.059  Sum_probs=111.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-----hHHHHH---------hhhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-----GQEALE---------KLQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-----~~~~~~---------~~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|+||++++++|+++ +..|++++|+.+.     ++...+         .+..+|++|++++.++++..     ++
T Consensus         6 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   79 (372)
T 1db3_A            6 ITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----QP   79 (372)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-----CC
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-----CC
Confidence            7999999999999999999 4688888887543     222111         12238999999999998876     79


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |+||||||....    ..+.+.++..+++|+.++..+++++.+... +.++||++||.+.+......             
T Consensus        80 d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~-------------  142 (372)
T 1db3_A           80 DEVYNLGAMSHV----AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEI-------------  142 (372)
T ss_dssp             SEEEECCCCCTT----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSS-------------
T ss_pred             CEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCC-------------
Confidence            999999997532    234456788999999999999999987543 23799999997664321100             


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhh
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQ  195 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~  195 (230)
                                      ..++..+..+...|+.+|.+.+.+++.++.++..
T Consensus       143 ----------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~  176 (372)
T 1db3_A          143 ----------------PQKETTPFYPRSPYAVAKLYAYWITVNYRESYGM  176 (372)
T ss_dssp             ----------------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ----------------CCCccCCCCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence                            0012233445689999999999999999887643

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.70  E-value=8.4e-17  Score=128.92  Aligned_cols=141  Identities=13%  Similarity=0.069  Sum_probs=101.8

Q ss_pred             CCCCCCcHHHHHHHHHH-HhcCCeEEEEecCcc-hhHHHHHh-----hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLI-QQFDGIIYLTARDAS-RGQEALEK-----LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la-~~g~~~vi~~~r~~~-~~~~~~~~-----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||+|+||++++++|+ ++ +..|++++|+++ +++.....     +..+|++|+++++++++       ++|+||||+
T Consensus        10 VtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vv~~a   81 (221)
T 3r6d_A           10 ILGAAGQIAQXLTATLLTYT-DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT-------NAEVVFVGA   81 (221)
T ss_dssp             EESTTSHHHHHHHHHHHHHC-CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT-------TCSEEEESC
T ss_pred             EEeCCcHHHHHHHHHHHhcC-CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc-------CCCEEEEcC
Confidence            79999999999999999 67 668889999887 66554311     12389999999988875       689999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |..                   |+.     ++.+++.|++.  ++||++||..++.......                  
T Consensus        82 g~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~------------------  119 (221)
T 3r6d_A           82 MES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVAL------------------  119 (221)
T ss_dssp             CCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHH------------------
T ss_pred             CCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccc------------------
Confidence            963                   222     56666666533  6999999988754321110                  


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCc-hhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNS-AYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                        ..+.           ..... .|+.+|.+++.+++.       .    |++++.|.||++.++
T Consensus       120 --~~~~-----------~~~~~~~y~~~K~~~e~~~~~-------~----~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          120 --EKWT-----------FDNLPISYVQGERQARNVLRE-------S----NLNYTILRLTWLYND  160 (221)
T ss_dssp             --HHHH-----------HHTSCHHHHHHHHHHHHHHHH-------S----CSEEEEEEECEEECC
T ss_pred             --cccc-----------ccccccHHHHHHHHHHHHHHh-------C----CCCEEEEechhhcCC
Confidence              0000           00113 899999999887642       2    688999999999887

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.70  E-value=8.8e-17  Score=136.47  Aligned_cols=165  Identities=16%  Similarity=0.085  Sum_probs=115.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||++++++|+++ ++.|++++|++.+.+....   .+..+|++|++++.++++       ++|+|||+||...
T Consensus        18 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~~~~   89 (342)
T 2x4g_A           18 VLGATGLLGHHAARAIRAA-GHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALR-------GLDGVIFSAGYYP   89 (342)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTT-------TCSEEEEC-----
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHc-------CCCEEEECCccCc
Confidence            7999999999999999999 5688888888765543211   122389999998887765       6999999999742


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                            ...+.+++.+++|+.++..+++++.+.  ..++||++||...+......                         
T Consensus        90 ------~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~-------------------------  136 (342)
T 2x4g_A           90 ------SRPRRWQEEVASALGQTNPFYAACLQA--RVPRILYVGSAYAMPRHPQG-------------------------  136 (342)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHH--TCSCEEEECCGGGSCCCTTS-------------------------
T ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHhhCcCCCC-------------------------
Confidence                  234567889999999999999998752  34799999998775422110                         


Q ss_pred             HHhhcCCCcCCCCC----CchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         158 ELAQDGSHTKGGWP----NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       158 ~~~~~~~~~~~~~~----~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                         ...++..+..+    ...|+.+|.+.+.+++.++..        |++++.+.||.+-++..
T Consensus       137 ---~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~--------g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          137 ---LPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN--------GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             ---SCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHT--------TCCEEEEEECEEECSCC
T ss_pred             ---CCCCCCCCCCccccccChHHHHHHHHHHHHHHHhhc--------CCcEEEEeCCceECCCC
Confidence               00012223334    679999999999999887752        36699999999988765

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.69  E-value=3.2e-16  Score=133.06  Aligned_cols=179  Identities=15%  Similarity=0.089  Sum_probs=117.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---------Hh--hhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---------EK--LQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---------~~--~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||++++++|+++ ++.|+.+.|+.+......         ..  +..+|++|+++++++++       .+|+|
T Consensus        10 VTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~V   81 (337)
T 2c29_D           10 VTGASGFIGSWLVMRLLER-GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK-------GCTGV   81 (337)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-------TCSEE
T ss_pred             EECCchHHHHHHHHHHHHC-CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-------CCCEE
Confidence            7999999999999999999 567777778765332111         11  22379999999888775       68999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||+|+...   .  ...+..+..+++|+.|+..+++++.+.. ..++||++||.++.+.......    ...+. ++...
T Consensus        82 ih~A~~~~---~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~~~~~~~~~----~~~E~-~~~~~  150 (337)
T 2c29_D           82 FHVATPMD---F--ESKDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTVNIQEHQLP----VYDES-CWSDM  150 (337)
T ss_dssp             EECCCCCC---S--SCSSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGTSCSSSCCS----EECTT-CCCCH
T ss_pred             EEeccccC---C--CCCChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhcccCCCCCc----ccCcc-cCCch
Confidence            99998641   1  1223345789999999999999987532 2479999999876432110000    00000 00000


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                      +. ..            ...++...|+.||.+.+.+++.++.+   .    |++++.+.|+.+-++...
T Consensus       151 ~~-~~------------~~~~~~~~Y~~sK~~~E~~~~~~~~~---~----gi~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          151 EF-CR------------AKKMTAWMYFVSKTLAEQAAWKYAKE---N----NIDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             HH-HH------------HHCCTTHHHHHHHHHHHHHHHHHHHH---H----TCCEEEEEECEEESCCSC
T ss_pred             hh-hc------------ccCCccchHHHHHHHHHHHHHHHHHH---c----CCcEEEEeCCceECCCCC
Confidence            00 00            00012357999999999888666532   2    577999999999888643

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.69  E-value=1.1e-16  Score=137.85  Aligned_cols=155  Identities=15%  Similarity=0.011  Sum_probs=113.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-----hHHHH--------H--hhhcccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-----GQEAL--------E--KLQKLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-----~~~~~--------~--~~~~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||+|+||+++++.|+++ +..|++++|+...     ++...        .  .+..+|++|++++.++++..     +
T Consensus        29 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~  102 (375)
T 1t2a_A           29 ITGITGQDGSYLAEFLLEK-GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-----K  102 (375)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EECCCchHHHHHHHHHHHC-CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-----C
Confidence            7999999999999999999 4678888886542     22110        1  12238999999999998876     7


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +|+||||||.....    .+.+.++..+++|+.++..+++++.+... +.++||++||...+......            
T Consensus       103 ~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~------------  166 (375)
T 1t2a_A          103 PTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEI------------  166 (375)
T ss_dssp             CSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSS------------
T ss_pred             CCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCC------------
Confidence            99999999974311    23466788999999999999999987543 23799999998765421100            


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~  194 (230)
                                       .-++..+..+...|+.+|++.+.+++.++.+++
T Consensus       167 -----------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~  199 (375)
T 1t2a_A          167 -----------------PQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN  199 (375)
T ss_dssp             -----------------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             -----------------CCCccCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence                             001122344568999999999999999887654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.69  E-value=1.2e-16  Score=135.16  Aligned_cols=168  Identities=14%  Similarity=0.104  Sum_probs=121.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||.+++++|+++| ..|++++|.........   -.+..+|++|++++++++++     .++|+|||+||...
T Consensus         6 VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih~a~~~~   79 (330)
T 2c20_A            6 ICGGAGYIGSHAVKKLVDEG-LSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMHFAADSL   79 (330)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHH-----SCEEEEEECCCCCC
T ss_pred             EECCCcHHHHHHHHHHHhCC-CEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhh-----cCCCEEEECCcccC
Confidence            79999999999999999994 67777777654322111   11234899999999888875     37999999999753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      ..    .+.+.++..+++|+.++..+++++..  ...+++|++||...+..+...                         
T Consensus        80 ~~----~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~~~~~~~~~~-------------------------  128 (330)
T 2c20_A           80 VG----VSMEKPLQYYNNNVYGALCLLEVMDE--FKVDKFIFSSTAATYGEVDVD-------------------------  128 (330)
T ss_dssp             HH----HHHHSHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGGGCSCSSS-------------------------
T ss_pred             cc----ccccCHHHHHHHHhHHHHHHHHHHHH--cCCCEEEEeCCceeeCCCCCC-------------------------
Confidence            21    13456788999999999999998753  123699999997664321100                         


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                          .-++..+..+...|+.+|.+.+.+++.++.++       |++++.+.|+.+-.+.
T Consensus       129 ----~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          129 ----LITEETMTNPTNTYGETKLAIEKMLHWYSQAS-------NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             ----SBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS-------SCEEEEEECSEEECCC
T ss_pred             ----CCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh-------CCcEEEEecCcccCCC
Confidence                00122234456899999999999998887654       4679999998876653

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.69  E-value=4.1e-17  Score=130.55  Aligned_cols=152  Identities=14%  Similarity=0.140  Sum_probs=113.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH-HHhhhcccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA-LEKLQKLDILD-KNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~-~~~~~~~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||+|+||++++++|+++ +..|++++|++++.+.. .-.+..+|++| ++++.++++       ++|+||||+|... 
T Consensus         5 ItGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi~~ag~~~-   75 (219)
T 3dqp_A            5 IVGSTGRVGKSLLKSLSTT-DYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLH-------GMDAIINVSGSGG-   75 (219)
T ss_dssp             EESTTSHHHHHHHHHHTTS-SCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTT-------TCSEEEECCCCTT-
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHc-------CCCEEEECCcCCC-
Confidence            7999999999999999999 57889999987755432 11223489999 888877764       7999999999853 


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                                 ...+++|+.++..+++++..  ...++||++||..+.......+                         
T Consensus        76 -----------~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~~~~~~~~e-------------------------  117 (219)
T 3dqp_A           76 -----------KSLLKVDLYGAVKLMQAAEK--AEVKRFILLSTIFSLQPEKWIG-------------------------  117 (219)
T ss_dssp             -----------SSCCCCCCHHHHHHHHHHHH--TTCCEEEEECCTTTTCGGGCCS-------------------------
T ss_pred             -----------CCcEeEeHHHHHHHHHHHHH--hCCCEEEEECcccccCCCcccc-------------------------
Confidence                       12788999999999998843  1236999999987754211100                         


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                              .+..+...|+.+|.+.+.+++      ...    |++++.+.||++-++..
T Consensus       118 --------~~~~~~~~Y~~sK~~~e~~~~------~~~----~i~~~ilrp~~v~g~~~  158 (219)
T 3dqp_A          118 --------AGFDALKDYYIAKHFADLYLT------KET----NLDYTIIQPGALTEEEA  158 (219)
T ss_dssp             --------HHHHHTHHHHHHHHHHHHHHH------HSC----CCEEEEEEECSEECSCC
T ss_pred             --------cccccccHHHHHHHHHHHHHH------hcc----CCcEEEEeCceEecCCC
Confidence                    000124799999999998875      222    78899999999987754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.69  E-value=1.9e-16  Score=134.86  Aligned_cols=160  Identities=16%  Similarity=0.013  Sum_probs=119.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||.++++.|+++ +..|+.++|++..   ..-.+..+|++|.+++.++++       ++|+|||+|+...   
T Consensus        24 VtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~---~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~---   89 (347)
T 4id9_A           24 VTGSAGRVGRAVVAALRTQ-GRTVRGFDLRPSG---TGGEEVVGSLEDGQALSDAIM-------GVSAVLHLGAFMS---   89 (347)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCCEEEEESSCCS---SCCSEEESCTTCHHHHHHHHT-------TCSEEEECCCCCC---
T ss_pred             EECCCChHHHHHHHHHHhC-CCEEEEEeCCCCC---CCccEEecCcCCHHHHHHHHh-------CCCEEEECCcccC---
Confidence            7999999999999999999 4677788887654   111223489999999888875       7999999999742   


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                         .+.+.++..+++|+.++..+++++.+  ...++||++||...+......                           .
T Consensus        90 ---~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~V~~SS~~vyg~~~~~---------------------------~  137 (347)
T 4id9_A           90 ---WAPADRDRMFAVNVEGTRRLLDAASA--AGVRRFVFASSGEVYPENRPE---------------------------F  137 (347)
T ss_dssp             ---SSGGGHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGGTTTTSCS---------------------------S
T ss_pred             ---cchhhHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCHHHhCCCCCC---------------------------C
Confidence               34455689999999999999999854  233699999997654321000                           0


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccc
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN  213 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~  213 (230)
                      ...++..+..+...|+.+|.+.+.+++.++.+.       |++++.+.|+.+-
T Consensus       138 ~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilRp~~v~  183 (347)
T 4id9_A          138 LPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG-------AMETVILRFSHTQ  183 (347)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-------SSEEEEEEECEEE
T ss_pred             CCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc-------CCceEEEccceEe
Confidence            001223345567899999999999998877653       4678899998776

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.68  E-value=1.7e-16  Score=136.19  Aligned_cols=162  Identities=19%  Similarity=0.170  Sum_probs=113.5

Q ss_pred             CCCCCCcHHHHHHHHHHH--hcCCeEEEEecCcchh-------------HHHH---HhhhcccCCCHHHHHHHHHHHHhh
Q psy7994           1 VTGANKGIGYGIVKGLIQ--QFDGIIYLTARDASRG-------------QEAL---EKLQKLDILDKNSIKALHDHLEAE   62 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~--~g~~~vi~~~r~~~~~-------------~~~~---~~~~~~D~s~~~~v~~~~~~~~~~   62 (230)
                      ||||+|+||.+++++|++  + +..|++++|.....             ....   ..+..+|++|+++++++      .
T Consensus        15 VTGatG~IG~~l~~~L~~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~------~   87 (362)
T 3sxp_A           15 ITGGAGFVGSNLAFHFQENHP-KAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL------E   87 (362)
T ss_dssp             EETTTSHHHHHHHHHHHHHCT-TSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH------T
T ss_pred             EECCCCHHHHHHHHHHHhhCC-CCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh------h
Confidence            799999999999999999  6 66888888755411             1000   01223899999998887      2


Q ss_pred             cCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          63 HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        63 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                      ..++|+||||||...      .+.+.++..+++|+.++..+++++..   .+.+||++||.+.+.....           
T Consensus        88 ~~~~D~vih~A~~~~------~~~~~~~~~~~~Nv~gt~~ll~aa~~---~~~~~V~~SS~~vyg~~~~-----------  147 (362)
T 3sxp_A           88 KLHFDYLFHQAAVSD------TTMLNQELVMKTNYQAFLNLLEIARS---KKAKVIYASSAGVYGNTKA-----------  147 (362)
T ss_dssp             TSCCSEEEECCCCCG------GGCCCHHHHHHHHTHHHHHHHHHHHH---TTCEEEEEEEGGGGCSCCS-----------
T ss_pred             ccCCCEEEECCccCC------ccccCHHHHHHHHHHHHHHHHHHHHH---cCCcEEEeCcHHHhCCCCC-----------
Confidence            358999999999642      24567889999999999999999842   3456999999655432211           


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEE-EEecCCcc
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVV-NCVHPGYV  212 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v-~~v~pG~v  212 (230)
                                         ..++..+..|...|+.+|.+.+.+++.++.++...    .+|. +.+.||..
T Consensus       148 -------------------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~----~lR~~~v~Gp~~~  195 (362)
T 3sxp_A          148 -------------------PNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQV----GLRYFNVYGPREF  195 (362)
T ss_dssp             -------------------SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTTSCEE----EEEECSEESTTCG
T ss_pred             -------------------CCCCCCCCCCCChhHHHHHHHHHHHHHHhccCCEE----EEEeCceeCcCCC
Confidence                               01223345566889999999999998887763332    3444 34445543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.68  E-value=3.1e-16  Score=133.13  Aligned_cols=163  Identities=13%  Similarity=0.022  Sum_probs=110.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc----hhHHHHH------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS----RGQEALE------KLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~----~~~~~~~------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||++++++|+++| ..|++++|...    .++...+      .+..+|++|+++++++++..     ++|+||
T Consensus         5 VTGatG~iG~~l~~~L~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~vi   78 (338)
T 1udb_A            5 VTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDTVI   78 (338)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSEEE
T ss_pred             EECCCCHHHHHHHHHHHHCC-CEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCEEE
Confidence            79999999999999999994 56666665322    1222111      12238999999998888752     699999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||||.....    ...+.+.+.+++|+.+++.+++++..  ...++||++||.+.+..+...                  
T Consensus        79 h~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~~g~~~~~------------------  134 (338)
T 1udb_A           79 HFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNFIFSSSATVYGDNPKI------------------  134 (338)
T ss_dssp             ECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGGGCSCCSS------------------
T ss_pred             ECCccCccc----cchhcHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEccHHHhCCCCCC------------------
Confidence            999974211    12345677899999999999997643  133699999997654321100                  


Q ss_pred             HHHHHHHHHhhcCCCcCCC-CCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCC
Q psy7994         151 ALMNEFVELAQDGSHTKGG-WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPG  210 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG  210 (230)
                                 ..++..+. ++...|+.||++++.+++.++.+..      ++++..+.|+
T Consensus       135 -----------~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~------~~~~~ilR~~  178 (338)
T 1udb_A          135 -----------PYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP------DWSIALLRYF  178 (338)
T ss_dssp             -----------SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHST------TCEEEEEEEC
T ss_pred             -----------CcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcC------CCceEEEeec
Confidence                       00111222 2367999999999999999887741      3455555543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.67  E-value=3.8e-16  Score=133.17  Aligned_cols=167  Identities=17%  Similarity=0.097  Sum_probs=122.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh--------------hhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK--------------LQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~--------------~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|+||++++++|+++ +..|+.++|...........              +..+|++|++++.++++       ++
T Consensus        30 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~  101 (351)
T 3ruf_A           30 ITGVAGFIGSNLLEKLLKL-NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-------GV  101 (351)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EECCCcHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-------CC
Confidence            7999999999999999999 56788888865543332221              12389999999888775       79


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |+|||+||....    ....+.+...+++|+.++..+++++...  ..+++|++||...+......              
T Consensus       102 d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~~--------------  161 (351)
T 3ruf_A          102 DHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKNA--QVQSFTYAASSSTYGDHPAL--------------  161 (351)
T ss_dssp             SEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCS--------------
T ss_pred             CEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEecHHhcCCCCCC--------------
Confidence            999999997421    1234557789999999999999988542  23599999998765432211              


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                     .-++..+..+...|+.+|.+.+.+++.++.+.       |++++.+.|+.+-.+..
T Consensus       162 ---------------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          162 ---------------PKVEENIGNPLSPYAVTKYVNEIYAQVYARTY-------GFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             ---------------SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCCEEEEECSEESTTC
T ss_pred             ---------------CCccCCCCCCCChhHHHHHHHHHHHHHHHHHh-------CCCEEEEeeCceeCcCC
Confidence                           01123344566899999999999998887764       35588899988866643

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.67  E-value=7.3e-16  Score=129.72  Aligned_cols=179  Identities=16%  Similarity=0.109  Sum_probs=109.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-Ccch---hHHHH------H--hhhcccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASR---GQEAL------E--KLQKLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~---~~~~~------~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+|+||++++++|+++ ++.|+.+.| +++.   .....      .  .+..+|++|+++++++++       .+|+
T Consensus         6 VTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   77 (322)
T 2p4h_X            6 VTGGTGFLGSWIIKSLLEN-GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE-------GCVG   77 (322)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------TCSE
T ss_pred             EECChhHHHHHHHHHHHHC-CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-------CCCE
Confidence            7999999999999999999 457777676 5421   21111      1  123489999999888875       5899


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||+|+..   .  ....+.+++.+++|+.|++.+++++.+.. ..++||++||..+.+......    ....+. ++..
T Consensus        78 vih~A~~~---~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~-~~~~iV~~SS~~~~~~~~~~~----~~~~e~-~~~~  146 (322)
T 2p4h_X           78 IFHTASPI---D--FAVSEPEEIVTKRTVDGALGILKACVNSK-TVKRFIYTSSGSAVSFNGKDK----DVLDES-DWSD  146 (322)
T ss_dssp             EEECCCCC-------------CHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEEEGGGTSCSSSCC----SEECTT-CCCC
T ss_pred             EEEcCCcc---c--CCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccHHHcccCCCCC----eecCCc-cccc
Confidence            99999642   1  11122245689999999999999997642 347999999987643211000    000000 0000


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                      .. ....            ..+....|+.||.+.+.+++.++.+   .    |++++.+.||.+-+++..
T Consensus       147 ~~-~~~~------------~~p~~~~Y~~sK~~~e~~~~~~~~~---~----gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          147 VD-LLRS------------VKPFGWNYAVSKTLAEKAVLEFGEQ---N----GIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             HH-HHHH------------HCCTTHHHHHHHHHHHHHHHHHHHH---T----TCCEEEEEECEEESCCCS
T ss_pred             hh-hhcc------------cCcccccHHHHHHHHHHHHHHHHHh---c----CCcEEEEcCCceECCCCC
Confidence            00 0000            0001126999999777766544321   2    577999999999988754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.67  E-value=1.9e-16  Score=134.29  Aligned_cols=168  Identities=22%  Similarity=0.121  Sum_probs=120.3

Q ss_pred             CCCCCCcHHHHHHHHHHHh-c-C---CeEEEEecCcc-----hhHHHH--H--hhhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-F-D---GIIYLTARDAS-----RGQEAL--E--KLQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g-~---~~vi~~~r~~~-----~~~~~~--~--~~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|+||++++++|+++ + +   ..|++++|...     .+....  .  .+..+|++|++++++++       .++
T Consensus         5 VTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~   77 (337)
T 1r6d_A            5 VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------RGV   77 (337)
T ss_dssp             EETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------TTC
T ss_pred             EECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-------cCC
Confidence            7999999999999999996 3 3   67888877542     121110  0  12238999999888776       489


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |+|||+||....    ..+.+.++..+++|+.++..+++++.+.  ..++||++||...+......              
T Consensus        78 d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~--~~~~~v~~SS~~vyg~~~~~--------------  137 (337)
T 1r6d_A           78 DAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA--GVGRVVHVSTNQVYGSIDSG--------------  137 (337)
T ss_dssp             CEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGCCCSSS--------------
T ss_pred             CEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecchHHhCCCCCC--------------
Confidence            999999997531    1233567789999999999999999764  23699999997654321100              


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                     .-++..+..+...|+.+|.+.+.+++.++.++       |++++.+.||.+-++..
T Consensus       138 ---------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          138 ---------------SWTESSPLEPNSPYAASKAGSDLVARAYHRTY-------GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             ---------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEECTTC
T ss_pred             ---------------CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH-------CCCEEEEEeeeeECCCC
Confidence                           00112244566899999999999998887764       35589999999887764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.67  E-value=9.5e-17  Score=137.44  Aligned_cols=169  Identities=15%  Similarity=0.015  Sum_probs=121.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH-HHHHhh-hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ-EALEKL-QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~-~~~~~~-~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||+|+||.+++++|+++|...|++++|...... .....+ ..+|++|.+.++.+++.  ..++++|+|||+||....
T Consensus        51 VtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~  128 (357)
T 2x6t_A           51 VTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAG--EEFGDVEAIFHEGACSST  128 (357)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTT--CCCSSCCEEEECCSCCCT
T ss_pred             EECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhh--cccCCCCEEEECCcccCC
Confidence            79999999999999999996367888888654321 000111 23799998888887763  235689999999997532


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                            +.+.++..+++|+.++..+++++.+  ... +||++||...+......+                         
T Consensus       129 ------~~~~~~~~~~~n~~~~~~ll~a~~~--~~~-r~V~~SS~~v~g~~~~~~-------------------------  174 (357)
T 2x6t_A          129 ------TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAATYGGRTSDF-------------------------  174 (357)
T ss_dssp             ------TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGGGCSCSSCC-------------------------
T ss_pred             ------ccCCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEcchHHhCCCCCCC-------------------------
Confidence                  3356788999999999999999975  233 999999987643211000                         


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                          -++..+..+...|+.+|.+.+.+++.++.+.       |++++.+.||.+-++.
T Consensus       175 ----~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~ilRp~~v~Gp~  221 (357)
T 2x6t_A          175 ----IESREYEKPLNVFGYSKFLFDEYVRQILPEA-------NSQIVGFRYFNVYGPR  221 (357)
T ss_dssp             ----CSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-------SSCEEEEEECEEESSS
T ss_pred             ----cCCcCCCCCCChhHHHHHHHHHHHHHHHHHc-------CCCEEEEecCeEECCC
Confidence                0111223346799999999999998876553       4668999999887664

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.66  E-value=4.1e-16  Score=130.71  Aligned_cols=167  Identities=13%  Similarity=0.068  Sum_probs=121.1

Q ss_pred             CCCCCCcHHHHHHHHHHHh-cCCeEEEEecCcchhHHHHHh--hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEK--LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g~~~vi~~~r~~~~~~~~~~~--~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||.+++++|+++ |++.|++++|+..... ....  +..+|++|++++++++++.     ++|+|||+||...
T Consensus         7 VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~   80 (312)
T 2yy7_A            7 IIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVNSGPFEVVNALDFNQIEHLVEVH-----KITDIYLMAALLS   80 (312)
T ss_dssp             EETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHHSSCEEECCTTCHHHHHHHHHHT-----TCCEEEECCCCCH
T ss_pred             EECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccCCCceEEecCCCHHHHHHHHhhc-----CCCEEEECCccCC
Confidence            7999999999999999998 4457777777665432 1122  2348999999999888754     7999999999753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      .     ...+.++..+++|+.++..+++++.+  ...+++|++||...+......                         
T Consensus        81 ~-----~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~~~~~~~~~-------------------------  128 (312)
T 2yy7_A           81 A-----TAEKNPAFAWDLNMNSLFHVLNLAKA--KKIKKIFWPSSIAVFGPTTPK-------------------------  128 (312)
T ss_dssp             H-----HHHHCHHHHHHHHHHHHHHHHHHHHT--TSCSEEECCEEGGGCCTTSCS-------------------------
T ss_pred             C-----chhhChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHHhCCCCCC-------------------------
Confidence            2     12356788999999999999999864  123699999998765421100                         


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                         ...++..+..+...|+.+|.+.+.+++.++.+.       |++++.+.|+.+-.+
T Consensus       129 ---~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lrp~~v~g~  176 (312)
T 2yy7_A          129 ---ENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY-------GVDVRSIRYPGLISW  176 (312)
T ss_dssp             ---SSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEECEEECEEECS
T ss_pred             ---CCccccCcCCCCchhHHHHHHHHHHHHHHHHhc-------CCcEEEEeCCeEecC
Confidence               000112233456899999999999998877543       467899999887664

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.66  E-value=1.4e-16  Score=127.92  Aligned_cols=160  Identities=10%  Similarity=0.058  Sum_probs=116.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh--hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK--LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~--~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||+|+||++++++|+++ +..|++++|++++.+.....  +..+|++|++++.++++       ++|+|||++|....
T Consensus         9 ItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~~   80 (227)
T 3dhn_A            9 LIGASGFVGSALLNEALNR-GFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK-------GADAVISAFNPGWN   80 (227)
T ss_dssp             EETCCHHHHHHHHHHHHTT-TCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT-------TCSEEEECCCC---
T ss_pred             EEcCCchHHHHHHHHHHHC-CCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhc-------CCCEEEEeCcCCCC
Confidence            7999999999999999999 57899999987765432112  22389999999988876       69999999987421


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                                ....+++|+.++..+++++.+.  ..+++|++||..++.......                         
T Consensus        81 ----------~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~-------------------------  123 (227)
T 3dhn_A           81 ----------NPDIYDETIKVYLTIIDGVKKA--GVNRFLMVGGAGSLFIAPGLR-------------------------  123 (227)
T ss_dssp             -------------CCSHHHHHHHHHHHHHHHT--TCSEEEEECCSTTSEEETTEE-------------------------
T ss_pred             ----------ChhHHHHHHHHHHHHHHHHHHh--CCCEEEEeCChhhccCCCCCc-------------------------
Confidence                      1127889999999999988542  235999999988754321110                         


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                           .+..+..+...|+.+|.+.+.+.+.++.+   .    |++++.+.||.+-++..
T Consensus       124 -----~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~----~~~~~ilrp~~v~g~~~  170 (227)
T 3dhn_A          124 -----LMDSGEVPENILPGVKALGEFYLNFLMKE---K----EIDWVFFSPAADMRPGV  170 (227)
T ss_dssp             -----GGGTTCSCGGGHHHHHHHHHHHHHTGGGC---C----SSEEEEEECCSEEESCC
T ss_pred             -----cccCCcchHHHHHHHHHHHHHHHHHHhhc---c----CccEEEEeCCcccCCCc
Confidence                 00123345689999999999887665542   2    68899999999876643

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.66  E-value=4.2e-16  Score=132.02  Aligned_cols=153  Identities=17%  Similarity=0.066  Sum_probs=110.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH-HHHHh--------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ-EALEK--------LQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~-~~~~~--------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|+||.++++.|+++ +..|++++|+..... ...+.        +..+|++|+++++++++..     ++|+|||
T Consensus        19 VTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih   92 (335)
T 1rpn_A           19 VTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQEVYN   92 (335)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EECCCChHHHHHHHHHHHC-CCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CCCEEEE
Confidence            7999999999999999999 467888888765421 11111        2238999999999998865     7999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      +||.....    .+.+.++..+++|+.++..+++++.+.  . .++||++||...+......                  
T Consensus        93 ~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~v~~SS~~v~g~~~~~------------------  148 (335)
T 1rpn_A           93 LAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF--SPETRFYQASTSEMFGLIQAE------------------  148 (335)
T ss_dssp             CCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH--CTTSEEEEEEEGGGGCSCSSS------------------
T ss_pred             Cccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEEeCHHHhCCCCCC------------------
Confidence            99974311    123457789999999999999998642  3 3799999997664321110                  


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~  194 (230)
                                 .-++..+..+...|+.+|.+.+.+++.++.+++
T Consensus       149 -----------~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  181 (335)
T 1rpn_A          149 -----------RQDENTPFYPRSPYGVAKLYGHWITVNYRESFG  181 (335)
T ss_dssp             -----------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             -----------CCCcccCCCCCChhHHHHHHHHHHHHHHHHHcC
Confidence                       001222344567999999999999998886653

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.66  E-value=1.7e-16  Score=133.46  Aligned_cols=159  Identities=18%  Similarity=0.102  Sum_probs=92.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||++++++|+++ ++.|++++|+... .   . +..+|++|++++.++++..     ++|+||||||....  
T Consensus         7 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~-~---~-~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~--   73 (315)
T 2ydy_A            7 VTGATGLLGRAVHKEFQQN-NWHAVGCGFRRAR-P---K-FEQVNLLDSNAVHHIIHDF-----QPHVIVHCAAERRP--   73 (315)
T ss_dssp             EETTTSHHHHHHHHHHHTT-TCEEEEEC-----------------------CHHHHHHH-----CCSEEEECC-------
T ss_pred             EECCCcHHHHHHHHHHHhC-CCeEEEEccCCCC-C---C-eEEecCCCHHHHHHHHHhh-----CCCEEEECCcccCh--
Confidence            7999999999999999999 4678888876543 1   1 5558999999999988765     79999999997532  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                        ..+.+.+++.+++|+.++..+++++.+   .+++||++||...+.... .                            
T Consensus        74 --~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~v~~~~~-~----------------------------  119 (315)
T 2ydy_A           74 --DVVENQPDAASQLNVDASGNLAKEAAA---VGAFLIYISSDYVFDGTN-P----------------------------  119 (315)
T ss_dssp             ----------------CHHHHHHHHHHHH---HTCEEEEEEEGGGSCSSS-C----------------------------
T ss_pred             --hhhhcCHHHHHHHHHHHHHHHHHHHHH---cCCeEEEEchHHHcCCCC-C----------------------------
Confidence              234567888999999999999999975   245999999987754210 0                            


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                       .-++..+..+...|+.+|.+.+.+++.++.++  .    .+|.+.|. |+..+
T Consensus       120 -~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~----~lR~~~v~-G~~~~  165 (315)
T 2ydy_A          120 -PYREEDIPAPLNLYGKTKLDGEKAVLENNLGA--A----VLRIPILY-GEVEK  165 (315)
T ss_dssp             -SBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC--E----EEEECSEE-CSCSS
T ss_pred             -CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe--E----EEeeeeee-CCCCc
Confidence             00112234456899999999999998875332  1    36677766 65554

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.66  E-value=4.7e-16  Score=130.75  Aligned_cols=165  Identities=16%  Similarity=0.123  Sum_probs=117.4

Q ss_pred             CCCCCCcHHHHHHHHHHHh-cCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||||+|+||.+++++|+++ |+..|++++|.....+  ...+..+|++|++++.+++++.     ++|+|||+||.... 
T Consensus         4 VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~-   75 (317)
T 3ajr_A            4 VTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--GIKFITLDVSNRDEIDRAVEKY-----SIDAIFHLAGILSA-   75 (317)
T ss_dssp             EESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--TCCEEECCTTCHHHHHHHHHHT-----TCCEEEECCCCCHH-
T ss_pred             EEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--CceEEEecCCCHHHHHHHHhhc-----CCcEEEECCcccCC-
Confidence            7999999999999999998 4557777777654432  1123448999999999888752     79999999997532 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL  159 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (230)
                          ...+.++..+++|+.++..+++++.+.  ..+++|++||...+......                           
T Consensus        76 ----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~---------------------------  122 (317)
T 3ajr_A           76 ----KGEKDPALAYKVNMNGTYNILEAAKQH--RVEKVVIPSTIGVFGPETPK---------------------------  122 (317)
T ss_dssp             ----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCTTSCS---------------------------
T ss_pred             ----ccccChHHHhhhhhHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCCCC---------------------------
Confidence                123567889999999999999988642  23699999998775421100                           


Q ss_pred             hhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEec-CCcccc
Q psy7994         160 AQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVH-PGYVNT  214 (230)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~-pG~v~t  214 (230)
                       ...++..+..+...|+.+|.+.+.+++.++.+.       |++++.+. |+.+.+
T Consensus       123 -~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lR~~~~~g~  170 (317)
T 3ajr_A          123 -NKVPSITITRPRTMFGVTKIAAELLGQYYYEKF-------GLDVRSLRYPGIISY  170 (317)
T ss_dssp             -SSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECS
T ss_pred             -CCccccccCCCCchHHHHHHHHHHHHHHHHHhc-------CCeEEEEecCcEecc
Confidence             000112234456899999999999998776542       46688886 444443

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.66  E-value=1.2e-15  Score=129.92  Aligned_cols=171  Identities=17%  Similarity=0.097  Sum_probs=118.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcc--hhHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDAS--RGQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~--~~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||.+++++|+++|. ..|+..+|...  .......       .+..+|++|++++.++++..     ++|+||
T Consensus        29 VtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi  103 (346)
T 4egb_A           29 VTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-----DVQVIV  103 (346)
T ss_dssp             EETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----TCCEEE
T ss_pred             EECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-----CCCEEE
Confidence            799999999999999999963 46666666431  1111111       12238999999999999864     699999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+||....    ....+.++..+++|+.++..+++++.+.  ..+++|++||...+......                  
T Consensus       104 h~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vy~~~~~~------------------  159 (346)
T 4egb_A          104 NFAAESHV----DRSIENPIPFYDTNVIGTVTLLELVKKY--PHIKLVQVSTDEVYGSLGKT------------------  159 (346)
T ss_dssp             ECCCCC-------------CHHHHHHTHHHHHHHHHHHHS--TTSEEEEEEEGGGGCCCCSS------------------
T ss_pred             ECCcccch----hhhhhCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCchHHhCCCCcC------------------
Confidence            99998532    1244667889999999999999998642  33689999997664422100                  


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                ..-++..+..+...|+.+|.+.+.+++.++.+.       |++++.+.|+.+-.+..
T Consensus       160 ----------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          160 ----------GRFTEETPLAPNSPYSSSKASADMIALAYYKTY-------QLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             ----------CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEESTTC
T ss_pred             ----------CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh-------CCCEEEEeecceeCcCC
Confidence                      001223345566899999999999998887664       35588999998876643

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.64  E-value=1.2e-15  Score=131.89  Aligned_cols=175  Identities=15%  Similarity=0.069  Sum_probs=121.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||.+++++|+++ ++.|++++|+........   -.+..+|++|.+++.++++       ++|+|||+||...
T Consensus        34 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~  105 (379)
T 2c5a_A           34 ITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE-------GVDHVFNLAADMG  105 (379)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred             EECCccHHHHHHHHHHHHC-CCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhC-------CCCEEEECceecC
Confidence            7999999999999999999 467888888765432111   1122489999999888774       7999999999752


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      ..   ..+.+.+++.+++|+.++..+++++.+.  ..++||++||...+........     ..++              
T Consensus       106 ~~---~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~~V~~SS~~v~~~~~~~~~-----~~~~--------------  161 (379)
T 2c5a_A          106 GM---GFIQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQLET-----TNVS--------------  161 (379)
T ss_dssp             CH---HHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSSSS-----SSCE--------------
T ss_pred             cc---cccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeehheeCCCCCCCc-----cCCC--------------
Confidence            11   0113567889999999999999998542  2369999999765432110000     0000              


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                         .+++...+..+...|+.+|.+.+.+++.++.+.       |++++.+.||.+-++..
T Consensus       162 ---~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          162 ---LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF-------GIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             ---ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEECTTS
T ss_pred             ---cCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH-------CCCEEEEEeCceeCcCC
Confidence               000000133456899999999999998887643       47799999999987754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.64  E-value=8.1e-16  Score=128.66  Aligned_cols=168  Identities=14%  Similarity=-0.010  Sum_probs=119.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchh--HHHHHhh-hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRG--QEALEKL-QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~--~~~~~~~-~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||++++++|+++|...|++++|.....  ... ..+ ..+|+++.+.++.+++..  .++++|+|||+||...
T Consensus         4 VtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~--~~~~~d~vi~~a~~~~   80 (310)
T 1eq2_A            4 VTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-VDLNIADYMDKEDFLIQIMAGE--EFGDVEAIFHEGACSS   80 (310)
T ss_dssp             EETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH-HTSCCSEEEEHHHHHHHHHTTC--CCSSCCEEEECCSCCC
T ss_pred             EEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc-CcceeccccccHHHHHHHHhcc--ccCCCcEEEECccccc
Confidence            7999999999999999999636788888866542  221 111 237999888887776521  0236999999999753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      .      ..+.++..+++|+.++..+++++.+.  .. ++|++||...+......                         
T Consensus        81 ~------~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g~~~~~-------------------------  126 (310)
T 1eq2_A           81 T------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSD-------------------------  126 (310)
T ss_dssp             T------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGTTCCSC-------------------------
T ss_pred             C------cccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeHHHhCCCCCC-------------------------
Confidence            2      33457889999999999999998652  33 99999998654321100                         


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                          .-++..+..+...|+.+|.+.+.+++.++.+.       |++++.+.||.+-++.
T Consensus       127 ----~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~~lrp~~v~G~~  174 (310)
T 1eq2_A          127 ----FIESREYEKPLNVYGYSKFLFDEYVRQILPEA-------NSQIVGFRYFNVYGPR  174 (310)
T ss_dssp             ----BCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-------SSCEEEEEECEEESSS
T ss_pred             ----CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-------CCCEEEEeCCcEECcC
Confidence                00111233456799999999999998876542       4669999999987664

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.63  E-value=7.9e-16  Score=128.00  Aligned_cols=137  Identities=20%  Similarity=0.183  Sum_probs=105.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||++++++|+++ +..|+.++|+            .+|++|++++++++++.     ++|+||||||....  
T Consensus        17 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~------------~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~--   76 (292)
T 1vl0_A           17 ITGANGQLGREIQKQLKGK-NVEVIPTDVQ------------DLDITNVLAVNKFFNEK-----KPNVVINCAAHTAV--   76 (292)
T ss_dssp             EESTTSHHHHHHHHHHTTS-SEEEEEECTT------------TCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH--
T ss_pred             EECCCChHHHHHHHHHHhC-CCeEEeccCc------------cCCCCCHHHHHHHHHhc-----CCCEEEECCccCCH--
Confidence            7999999999999999999 5688888886            37999999999988765     79999999997431  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                        ..+.+.+++.+++|+.++..+++++.+.   +.+||++||.+.+......                            
T Consensus        77 --~~~~~~~~~~~~~nv~~~~~l~~a~~~~---~~~iv~~SS~~v~~~~~~~----------------------------  123 (292)
T 1vl0_A           77 --DKCEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGEAKE----------------------------  123 (292)
T ss_dssp             --HHHHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSCCSS----------------------------
T ss_pred             --HHHhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEechHHeECCCCCC----------------------------
Confidence              1234668899999999999999998652   3499999998664322100                            


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHH
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHA  191 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~  191 (230)
                       .-++..+..+...|+.+|.+.+.+++.++.
T Consensus       124 -~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~  153 (292)
T 1vl0_A          124 -PITEFDEVNPQSAYGKTKLEGENFVKALNP  153 (292)
T ss_dssp             -CBCTTSCCCCCSHHHHHHHHHHHHHHHHCS
T ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHHHhhCC
Confidence             001122334568999999999999977653

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.63  E-value=7.1e-16  Score=133.18  Aligned_cols=171  Identities=15%  Similarity=0.111  Sum_probs=117.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---H--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---E--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|+||.+++++|+++|...|++++|+........   .  .+..+|++|+++++++++       ++|+|||+||.
T Consensus        37 VtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vih~A~~  109 (377)
T 2q1s_A           37 VVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQD-------EYDYVFHLATY  109 (377)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCS-------CCSEEEECCCC
T ss_pred             EECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhh-------CCCEEEECCCc
Confidence            79999999999999999995268888888754422111   1  122389999988776654       79999999997


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ....    .+.+.++..+++|+.++..+++++... ...++||++||...+......+                      
T Consensus       110 ~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~V~~SS~~vyg~~~~~~----------------------  162 (377)
T 2q1s_A          110 HGNQ----SSIHDPLADHENNTLTTLKLYERLKHF-KRLKKVVYSAAGCSIAEKTFDD----------------------  162 (377)
T ss_dssp             SCHH----HHHHCHHHHHHHHTHHHHHHHHHHTTC-SSCCEEEEEEEC--------------------------------
T ss_pred             cCch----hhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCCHHHcCCCCCCC----------------------
Confidence            5321    233567889999999999999998541 0235999999976543211000                      


Q ss_pred             HHHHhhcCCCcC---CC-CCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         156 FVELAQDGSHTK---GG-WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       156 ~~~~~~~~~~~~---~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                           .+.++..   +. .+...|+.+|.+.+.+++.++.+.       |++++.+.||.+-++..
T Consensus       163 -----~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          163 -----AKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH-------QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             ---------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECTTC
T ss_pred             -----cCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh-------CCCEEEEeeccEECCCC
Confidence                 0000111   22 456899999999999998887654       36699999999877654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.63  E-value=1.1e-15  Score=125.72  Aligned_cols=151  Identities=15%  Similarity=0.062  Sum_probs=111.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||++++++|++ | +.|++++|++...    .. ..+|++|+++++++++.+     ++|+||||||....  
T Consensus         5 VtGatG~iG~~l~~~L~~-g-~~V~~~~r~~~~~----~~-~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~--   70 (273)
T 2ggs_A            5 ITGASGQLGIELSRLLSE-R-HEVIKVYNSSEIQ----GG-YKLDLTDFPRLEDFIIKK-----RPDVIINAAAMTDV--   70 (273)
T ss_dssp             EETTTSHHHHHHHHHHTT-T-SCEEEEESSSCCT----TC-EECCTTSHHHHHHHHHHH-----CCSEEEECCCCCCH--
T ss_pred             EECCCChhHHHHHHHHhc-C-CeEEEecCCCcCC----CC-ceeccCCHHHHHHHHHhc-----CCCEEEECCcccCh--
Confidence            799999999999999995 4 7788888876431    12 458999999999998875     79999999997532  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                        ..+.+.+++.+++|+.++..+++++.+   .+++||++||..++......                            
T Consensus        71 --~~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~iv~~SS~~~~~~~~~~----------------------------  117 (273)
T 2ggs_A           71 --DKCEIEKEKAYKINAEAVRHIVRAGKV---IDSYIVHISTDYVFDGEKGN----------------------------  117 (273)
T ss_dssp             --HHHHHCHHHHHHHHTHHHHHHHHHHHH---TTCEEEEEEEGGGSCSSSCS----------------------------
T ss_pred             --hhhhhCHHHHHHHhHHHHHHHHHHHHH---hCCeEEEEecceeEcCCCCC----------------------------
Confidence              123467889999999999999999864   34699999998775321100                            


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEec
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVH  208 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~  208 (230)
                        -++..+..+...|+.+|.+++.+++.    +...    .+|++.|.
T Consensus       118 --~~e~~~~~~~~~Y~~sK~~~e~~~~~----~~~~----~iR~~~v~  155 (273)
T 2ggs_A          118 --YKEEDIPNPINYYGLSKLLGETFALQ----DDSL----IIRTSGIF  155 (273)
T ss_dssp             --BCTTSCCCCSSHHHHHHHHHHHHHCC----TTCE----EEEECCCB
T ss_pred             --cCCCCCCCCCCHHHHHHHHHHHHHhC----CCeE----EEeccccc
Confidence              01122334468999999999999876    2222    46677766

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.63  E-value=9.5e-17  Score=127.59  Aligned_cols=146  Identities=10%  Similarity=-0.000  Sum_probs=110.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||||+|+||++++++|+++|. ..|++++|++.+ ....-.+..+|++|++++++++         +|+||||+|.... 
T Consensus        10 VtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~~~~~~~~~~D~~~~~~~~~~~---------~d~vi~~a~~~~~-   78 (215)
T 2a35_A           10 LAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-EHPRLDNPVGPLAELLPQLDGS---------IDTAFCCLGTTIK-   78 (215)
T ss_dssp             EECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-CCTTEECCBSCHHHHGGGCCSC---------CSEEEECCCCCHH-
T ss_pred             EECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-cCCCceEEeccccCHHHHHHhh---------hcEEEECeeeccc-
Confidence            799999999999999999955 288889998765 1000112237888877665543         8999999997532 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL  159 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (230)
                           +.+.+++.+++|+.++..+++++.+.  ..++||++||...+.                                
T Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~--------------------------------  119 (215)
T 2a35_A           79 -----EAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADA--------------------------------  119 (215)
T ss_dssp             -----HHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCT--------------------------------
T ss_pred             -----cCCCHHHHHHhhHHHHHHHHHHHHHc--CCCEEEEECCcccCC--------------------------------
Confidence                 23567889999999999999988642  336899999987732                                


Q ss_pred             hhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeE-EEEecCCccccCCC
Q psy7994         160 AQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLV-VNCVHPGYVNTDMS  217 (230)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~-v~~v~pG~v~t~~~  217 (230)
                                .+...|+.+|.+++.+++.       .    |++ ++.+.||++-++..
T Consensus       120 ----------~~~~~y~~sK~~~e~~~~~-------~----~~~~~~~vrp~~v~g~~~  157 (215)
T 2a35_A          120 ----------KSSIFYNRVKGELEQALQE-------Q----GWPQLTIARPSLLFGPRE  157 (215)
T ss_dssp             ----------TCSSHHHHHHHHHHHHHTT-------S----CCSEEEEEECCSEESTTS
T ss_pred             ----------CCccHHHHHHHHHHHHHHH-------c----CCCeEEEEeCceeeCCCC
Confidence                      1347899999999998753       1    577 99999999987753

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.62  E-value=2.3e-15  Score=127.77  Aligned_cols=143  Identities=20%  Similarity=0.111  Sum_probs=102.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH-----hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-----KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~-----~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|+||.+++++|+++ +..|++++|+.........     .+..+|++|+++++++++..     ++|+||||||.
T Consensus        26 VTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~vih~A~~   99 (333)
T 2q1w_A           26 ITGICGQIGSHIAELLLER-GDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDL-----QPDAVVHTAAS   99 (333)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCC
T ss_pred             EeCCccHHHHHHHHHHHHC-CCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhcc-----CCcEEEECcee
Confidence            7999999999999999999 4678888886543221111     12348999999999888752     79999999998


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccc----cccchHHHHHHhhhhchhHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHL----CHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      ....     +.++++  +++|+.++..+++++.+  ...++||++||.+.+.    .+...                   
T Consensus       100 ~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~~~~g~~~~~~~~~-------------------  151 (333)
T 2q1w_A          100 YKDP-----DDWYND--TLTNCVGGSNVVQAAKK--NNVGRFVYFQTALCYGVKPIQQPVR-------------------  151 (333)
T ss_dssp             CSCT-----TCHHHH--HHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGGGCSCCCSSSBC-------------------
T ss_pred             cCCC-----ccCChH--HHHHHHHHHHHHHHHHH--hCCCEEEEECcHHHhCCCcccCCCC-------------------
Confidence            5321     334444  99999999999999975  2347999999976543    11000                   


Q ss_pred             HHHHHHHHhhcCCCcCCCCCC-chhhHHHHHHHHHHHH-HH
Q psy7994         152 LMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFL-QH  190 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~-la  190 (230)
                                 -++..  .+. ..|+.+|.+.+.+++. ++
T Consensus       152 -----------~~E~~--~p~~~~Y~~sK~~~E~~~~~s~~  179 (333)
T 2q1w_A          152 -----------LDHPR--NPANSSYAISKSANEDYLEYSGL  179 (333)
T ss_dssp             -----------TTSCC--CCTTCHHHHHHHHHHHHHHHHTC
T ss_pred             -----------cCCCC--CCCCCchHHHHHHHHHHHHhhhC
Confidence                       00011  344 7999999999999877 54

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.62  E-value=9.1e-16  Score=134.65  Aligned_cols=170  Identities=15%  Similarity=0.096  Sum_probs=112.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch---hHHHHHh------------------hhcccCCCHHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR---GQEALEK------------------LQKLDILDKNSIKALHDHL   59 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~---~~~~~~~------------------~~~~D~s~~~~v~~~~~~~   59 (230)
                      ||||+|+||.+++++|+++ +..|+++.|++..   .+...+.                  +..+|++|++++.      
T Consensus        74 VTGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~------  146 (427)
T 4f6c_A           74 LTGATGFLGAYLIEALQGY-SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV------  146 (427)
T ss_dssp             EECTTSHHHHHHHHHHTTT-EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC------
T ss_pred             EecCCcHHHHHHHHHHHcC-CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC------
Confidence            7999999999999999888 5688888888762   2221111                  1127999988877      


Q ss_pred             HhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHh
Q psy7994          60 EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKL  139 (230)
Q Consensus        60 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~  139 (230)
                        .++++|+||||||...       ..+.++..+++|+.++..+++++.+   ...+||++||... ........    .
T Consensus       147 --~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~-G~~~~~~~----~  209 (427)
T 4f6c_A          147 --LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GTYFDIDT----E  209 (427)
T ss_dssp             --CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGG-GSEECSSC----S
T ss_pred             --CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHh-CCCccCCC----C
Confidence              4579999999999852       2356788999999999999999976   4579999999876 21100000    0


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         140 LHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                      ..+.                 ...+...+..+...|+.+|.+.+.+++.++.    .    |++++.+.||.+-++....
T Consensus       210 ~~~~-----------------~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~----g~~~~ivRpg~v~G~~~~~  264 (427)
T 4f6c_A          210 DVTF-----------------SEADVYKGQLLTSPYTRSKFYSELKVLEAVN----N----GLDGRIVRVGNLTSPYNGR  264 (427)
T ss_dssp             CCEE-----------------CTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----T----TCCEEEEEECCEESCSSSC
T ss_pred             Cccc-----------------cccccccCCCCCCchHHHHHHHHHHHHHHHH----c----CCCEEEEeCCeeecCCCCC
Confidence            0000                 0000011133668999999999999987643    3    5779999999998776543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.62  E-value=4.9e-15  Score=116.61  Aligned_cols=148  Identities=14%  Similarity=0.061  Sum_probs=107.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH-HH--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA-LE--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~-~~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||++++++|+++ +..|++++|++++.+.. ..  .+..+|++|++++.++++       .+|+||||+|...
T Consensus         8 VtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~~~~   79 (206)
T 1hdo_A            8 IFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRN   79 (206)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTT
T ss_pred             EEcCCcHHHHHHHHHHHHC-CCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHc-------CCCEEEECccCCC
Confidence            7999999999999999999 57888889987654321 01  122389999999888775       5899999999753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      .   .  +      ..++|+.++..+++++.+  ...++||++||...+.....                          
T Consensus        80 ~---~--~------~~~~n~~~~~~~~~~~~~--~~~~~~v~~Ss~~~~~~~~~--------------------------  120 (206)
T 1hdo_A           80 D---L--S------PTTVMSEGARNIVAAMKA--HGVDKVVACTSAFLLWDPTK--------------------------  120 (206)
T ss_dssp             C---C--S------CCCHHHHHHHHHHHHHHH--HTCCEEEEECCGGGTSCTTC--------------------------
T ss_pred             C---C--C------ccchHHHHHHHHHHHHHH--hCCCeEEEEeeeeeccCccc--------------------------
Confidence            2   1  1      124788899999888754  23469999999865431110                          


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc-ccCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV-NTDM  216 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v-~t~~  216 (230)
                                ...+...|+.+|.+++.+++.       .    +++++.+.||.+ .++.
T Consensus       121 ----------~~~~~~~y~~~K~~~e~~~~~-------~----~i~~~~lrp~~~~~~~~  159 (206)
T 1hdo_A          121 ----------VPPRLQAVTDDHIRMHKVLRE-------S----GLKYVAVMPPHIGDQPL  159 (206)
T ss_dssp             ----------SCGGGHHHHHHHHHHHHHHHH-------T----CSEEEEECCSEEECCCC
T ss_pred             ----------ccccchhHHHHHHHHHHHHHh-------C----CCCEEEEeCCcccCCCC
Confidence                      000457899999999988732       2    688999999998 4443

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.61  E-value=1.2e-15  Score=126.52  Aligned_cols=150  Identities=15%  Similarity=0.123  Sum_probs=113.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||.++++.|+++ ++.|+.++|            ..+|++|.+++.+++++.     ++|+|||+||..... 
T Consensus        10 VtGatG~iG~~l~~~L~~~-g~~V~~~~r------------~~~D~~d~~~~~~~~~~~-----~~d~vi~~a~~~~~~-   70 (287)
T 3sc6_A           10 ITGANGQLGKQLQEELNPE-EYDIYPFDK------------KLLDITNISQVQQVVQEI-----RPHIIIHCAAYTKVD-   70 (287)
T ss_dssp             EESTTSHHHHHHHHHSCTT-TEEEEEECT------------TTSCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH-
T ss_pred             EECCCCHHHHHHHHHHHhC-CCEEEEecc------------cccCCCCHHHHHHHHHhc-----CCCEEEECCcccChH-
Confidence            7999999999999999999 568888888            238999999999999876     799999999985321 


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                         ...+.++..+++|+.++..+++++.+   .+.++|++||...+......                            
T Consensus        71 ---~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~v~~SS~~vy~~~~~~----------------------------  116 (287)
T 3sc6_A           71 ---QAEKERDLAYVINAIGARNVAVASQL---VGAKLVYISTDYVFQGDRPE----------------------------  116 (287)
T ss_dssp             ---HHTTCHHHHHHHHTHHHHHHHHHHHH---HTCEEEEEEEGGGSCCCCSS----------------------------
T ss_pred             ---HHhcCHHHHHHHHHHHHHHHHHHHHH---cCCeEEEEchhhhcCCCCCC----------------------------
Confidence               22256788999999999999999853   23589999998665332111                            


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                       .-++..+..|...|+.+|.+.+.+++.++.    .       ++.+.|+.+-.+
T Consensus       117 -~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~----~-------~~ilR~~~v~G~  159 (287)
T 3sc6_A          117 -GYDEFHNPAPINIYGASKYAGEQFVKELHN----K-------YFIVRTSWLYGK  159 (287)
T ss_dssp             -CBCTTSCCCCCSHHHHHHHHHHHHHHHHCS----S-------EEEEEECSEECS
T ss_pred             -CCCCCCCCCCCCHHHHHHHHHHHHHHHhCC----C-------cEEEeeeeecCC
Confidence             011223445668999999999999876543    2       456677766544

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.61  E-value=2.7e-15  Score=127.26  Aligned_cols=167  Identities=14%  Similarity=0.066  Sum_probs=117.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH----hhhcccCCCH-HHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----KLQKLDILDK-NSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~----~~~~~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|+||.+++++|+++++..|++++|+..+.+....    .+..+|++|. +.++++++       ++|+|||+||.
T Consensus         5 VtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~~d~vih~A~~   77 (345)
T 2bll_A            5 ILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAI   77 (345)
T ss_dssp             EETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-------HCSEEEECBCC
T ss_pred             EECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-------CCCEEEEcccc
Confidence            799999999999999999855688888888766543211    1223899984 56666665       58999999997


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ..+.    ...+.++..+++|+.++..+++++.+.   ++++|++||...+......+                      
T Consensus        78 ~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~v~g~~~~~~----------------------  128 (345)
T 2bll_A           78 ATPI----EYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKY----------------------  128 (345)
T ss_dssp             CCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCCSS----------------------
T ss_pred             cCcc----chhcCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEEecHHHcCCCCCCC----------------------
Confidence            5321    112456789999999999999988642   27999999976543211000                      


Q ss_pred             HHHHhhcCCCcC------C-CCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         156 FVELAQDGSHTK------G-GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       156 ~~~~~~~~~~~~------~-~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                             -++..      + ..+...|+.+|.+.+.+++.++.+.       |++++.+.||.+-++..
T Consensus       129 -------~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          129 -------FDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-------GLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             -------BCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECSEECSSC
T ss_pred             -------cCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc-------CCCEEEEcCCcccCCCc
Confidence                   00010      0 1234589999999999998887654       36689999999876653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.61  E-value=2.5e-15  Score=129.22  Aligned_cols=166  Identities=16%  Similarity=0.095  Sum_probs=120.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH----hhhcccCC-CHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----KLQKLDIL-DKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~----~~~~~D~s-~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|+||.+++++|++++++.|+.++|+.++......    ++..+|++ |.+.+.++++       ++|+|||+|+.
T Consensus        29 VtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-------~~d~Vih~A~~  101 (372)
T 3slg_A           29 ILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-------KCDVILPLVAI  101 (372)
T ss_dssp             EESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-------HCSEEEECBCC
T ss_pred             EECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-------cCCEEEEcCcc
Confidence            799999999999999999855688888898766544322    22238999 9999988886       59999999998


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ....    ...+...+.+++|+.++..+++++...  . .++|++||...+......+.                     
T Consensus       102 ~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~--~-~~~v~~SS~~vyg~~~~~~~---------------------  153 (372)
T 3slg_A          102 ATPA----TYVKQPLRVFELDFEANLPIVRSAVKY--G-KHLVFPSTSEVYGMCADEQF---------------------  153 (372)
T ss_dssp             CCHH----HHHHCHHHHHHHHTTTTHHHHHHHHHH--T-CEEEEECCGGGGBSCCCSSB---------------------
T ss_pred             ccHH----HHhhCHHHHHHHHHHHHHHHHHHHHHh--C-CcEEEeCcHHHhCCCCCCCC---------------------
Confidence            5321    123456788999999999999988642  2 79999999655432111000                     


Q ss_pred             HHHHhhcCCCcC------C-CCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         156 FVELAQDGSHTK------G-GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       156 ~~~~~~~~~~~~------~-~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                              ++..      + ..+...|+.+|.+.+.+++.++.+        |++++.+.|+.+-.+..
T Consensus       154 --------~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~--------g~~~~ilRp~~v~G~~~  206 (372)
T 3slg_A          154 --------DPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME--------GLNFTLFRPFNWIGPGL  206 (372)
T ss_dssp             --------CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT--------TCEEEEEEECSEECSSC
T ss_pred             --------CccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC--------CCCEEEEccccccCCCc
Confidence                    0011      0 134568999999999999877654        36688999998866643

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.61  E-value=4.9e-15  Score=118.45  Aligned_cols=157  Identities=14%  Similarity=0.087  Sum_probs=105.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||++++++|+++ +..|++++|+++++.....   ++..+|++|+++  +       .+.++|+||||+|...
T Consensus         5 VtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~-------~~~~~d~vi~~ag~~~   74 (224)
T 3h2s_A            5 VLGATGRAGSAIVAEARRR-GHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--A-------DLDSVDAVVDALSVPW   74 (224)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--H-------HHTTCSEEEECCCCCT
T ss_pred             EEcCCCHHHHHHHHHHHHC-CCEEEEEEecccccccccCCCceEEecccccccH--h-------hcccCCEEEECCccCC
Confidence            7999999999999999999 5688899998877664322   122389999887  2       2357999999999852


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      ..           ...++|+.++..+++++..   .++++|++||.++.+.......       ..              
T Consensus        75 ~~-----------~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~-------~~--------------  119 (224)
T 3h2s_A           75 GS-----------GRGYLHLDFATHLVSLLRN---SDTLAVFILGSASLAMPGADHP-------MI--------------  119 (224)
T ss_dssp             TS-----------SCTHHHHHHHHHHHHTCTT---CCCEEEEECCGGGSBCTTCSSC-------GG--------------
T ss_pred             Cc-----------chhhHHHHHHHHHHHHHHH---cCCcEEEEecceeeccCCCCcc-------cc--------------
Confidence            11           1246788888887777643   2389999999877543211000       00              


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                         .  ++.....+...|+.+|.+.+.+.    ......    |++++.+.||++.++
T Consensus       120 ---~--~~~~~~~~~~~y~~sK~~~e~~~----~~~~~~----~i~~~ivrp~~v~g~  164 (224)
T 3h2s_A          120 ---L--DFPESAASQPWYDGALYQYYEYQ----FLQMNA----NVNWIGISPSEAFPS  164 (224)
T ss_dssp             ---G--GCCGGGGGSTTHHHHHHHHHHHH----HHTTCT----TSCEEEEEECSBCCC
T ss_pred             ---c--cCCCCCccchhhHHHHHHHHHHH----HHHhcC----CCcEEEEcCccccCC
Confidence               0  00001112578999999888542    112233    677999999999876

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.60  E-value=4e-15  Score=124.05  Aligned_cols=154  Identities=16%  Similarity=0.064  Sum_probs=115.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||.+++++|+ + ++.|+.++|+..        ...+|++|++++.++++..     ++|+|||+||..... 
T Consensus         5 VtGatG~iG~~l~~~L~-~-g~~V~~~~r~~~--------~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~-   68 (299)
T 1n2s_A            5 LFGKTGQVGWELQRSLA-P-VGNLIALDVHSK--------EFCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVD-   68 (299)
T ss_dssp             EECTTSHHHHHHHHHTT-T-TSEEEEECTTCS--------SSCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH-
T ss_pred             EECCCCHHHHHHHHHhh-c-CCeEEEeccccc--------cccccCCCHHHHHHHHHhc-----CCCEEEECcccCCHh-
Confidence            79999999999999999 7 578888888762        3458999999999988764     699999999975321 


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                         ...+.++..+++|+.++..+++++.+   .+.++|++||...+......                            
T Consensus        69 ---~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~vy~~~~~~----------------------------  114 (299)
T 1n2s_A           69 ---KAESEPELAQLLNATSVEAIAKAANE---TGAWVVHYSTDYVFPGTGDI----------------------------  114 (299)
T ss_dssp             ---HHTTCHHHHHHHHTHHHHHHHHHHTT---TTCEEEEEEEGGGSCCCTTC----------------------------
T ss_pred             ---hhhcCHHHHHHHHHHHHHHHHHHHHH---cCCcEEEEecccEEeCCCCC----------------------------
Confidence               12355778999999999999999854   23489999998664422110                            


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                       .-++..+..+...|+.+|.+.+.+++.++.    .       ++.+.|+.+-++.
T Consensus       115 -~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~----~-------~~ilRp~~v~G~~  158 (299)
T 1n2s_A          115 -PWQETDATSPLNVYGKTKLAGEKALQDNCP----K-------HLIFRTSWVYAGK  158 (299)
T ss_dssp             -CBCTTSCCCCSSHHHHHHHHHHHHHHHHCS----S-------EEEEEECSEECSS
T ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHHHHhCC----C-------eEEEeeeeecCCC
Confidence             001222344568999999999999876542    2       7788888887664

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.60  E-value=6e-15  Score=123.91  Aligned_cols=160  Identities=13%  Similarity=0.115  Sum_probs=116.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh--hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL--QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~--~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||+|+||.++++.|+++ +..|+.++|++...+  ...+  ..+|++ .+++.++++       ++|+|||+|+....
T Consensus         7 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~--~~~~~~~~~Dl~-~~~~~~~~~-------~~d~Vih~a~~~~~   75 (311)
T 3m2p_A            7 VTGGTGFLGQYVVESIKND-GNTPIILTRSIGNKA--INDYEYRVSDYT-LEDLINQLN-------DVDAVVHLAATRGS   75 (311)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCCC-------CCEEEECCCC-HHHHHHHTT-------TCSEEEECCCCCCS
T ss_pred             EECCCcHHHHHHHHHHHhC-CCEEEEEeCCCCccc--CCceEEEEcccc-HHHHHHhhc-------CCCEEEEccccCCC
Confidence            7999999999999999999 568888888844333  2222  238999 888887765       79999999998542


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      .        .+...+++|+.++..+++++...  ...++|++||...+..+...                          
T Consensus        76 ~--------~~~~~~~~n~~~~~~ll~a~~~~--~~~r~v~~SS~~vyg~~~~~--------------------------  119 (311)
T 3m2p_A           76 Q--------GKISEFHDNEILTQNLYDACYEN--NISNIVYASTISAYSDETSL--------------------------  119 (311)
T ss_dssp             S--------SCGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCCGGGC--------------------------
T ss_pred             C--------ChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCCCCC--------------------------
Confidence            2        45668899999999999988531  23589999996654432111                          


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                         .-++..+..+...|+.+|.+.+.+++.++.+   .    |++++.+.|+.+-.+..
T Consensus       120 ---~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~----g~~~~ilRp~~v~G~~~  168 (311)
T 3m2p_A          120 ---PWNEKELPLPDLMYGVSKLACEHIGNIYSRK---K----GLCIKNLRFAHLYGFNE  168 (311)
T ss_dssp             ---SBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH---S----CCEEEEEEECEEECSCC
T ss_pred             ---CCCCCCCCCCCchhHHHHHHHHHHHHHHHHH---c----CCCEEEEeeCceeCcCC
Confidence               0122334556789999999999999877663   2    57799999998876643

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.59  E-value=7.6e-16  Score=130.68  Aligned_cols=174  Identities=18%  Similarity=0.151  Sum_probs=109.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH---HH--HH---h--hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ---EA--LE---K--LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~---~~--~~---~--~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||++++++|+++ ++.|+.+.|+.+...   ..  ..   .  +..+|++|++++.++++       ++|+||
T Consensus        14 VTGatGfIG~~l~~~Ll~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~Vi   85 (338)
T 2rh8_A           14 VVGGTGFVASLLVKLLLQK-GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GCDFVF   85 (338)
T ss_dssp             EECTTSHHHHHHHHHHHHT-TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TCSEEE
T ss_pred             EECCchHHHHHHHHHHHHC-CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CCCEEE
Confidence            7999999999999999999 557777777654321   11  11   1  22379999998887765       689999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+|+...   .  ...+..++.+++|+.|++.+++++.+.. ..++||++||.++.+.....        .+.       
T Consensus        86 h~A~~~~---~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~~~--------~~~-------  144 (338)
T 2rh8_A           86 HVATPVH---F--ASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQLD--------GTG-------  144 (338)
T ss_dssp             EESSCCC---C-----------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHHHT--------CSC-------
T ss_pred             EeCCccC---C--CCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCCcC--------CCC-------
Confidence            9998641   1  1122234589999999999999987532 24699999997653211000        000       


Q ss_pred             HHHHHHHHHhhcCCCcC------CC-CCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         151 ALMNEFVELAQDGSHTK------GG-WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~------~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                              ...+++...      +. ++...|+.||.+.+.+++.++.+   .    |++++++.||.+-++...
T Consensus       145 --------~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~----gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          145 --------LVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---N----NIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             --------CCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---H----TCCEEEEEECEEESCCSS
T ss_pred             --------cccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---c----CCcEEEEeCCceECCCCC
Confidence                    000000000      00 01126999999988887665543   2    567999999999988654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.57  E-value=1.1e-14  Score=122.59  Aligned_cols=163  Identities=15%  Similarity=0.097  Sum_probs=115.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||.+++++|+++| ..|+++.|+.           .+|++|.+++.+++++.     ++|+|||+||....  
T Consensus         8 VtGatG~iG~~l~~~L~~~g-~~v~~~~r~~-----------~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~--   68 (321)
T 1e6u_A            8 IAGHRGMVGSAIRRQLEQRG-DVELVLRTRD-----------ELNLLDSRAVHDFFASE-----RIDQVYLAAAKVGG--   68 (321)
T ss_dssp             EETTTSHHHHHHHHHHTTCT-TEEEECCCTT-----------TCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCC--
T ss_pred             EECCCcHHHHHHHHHHHhCC-CeEEEEecCc-----------cCCccCHHHHHHHHHhc-----CCCEEEEcCeecCC--
Confidence            79999999999999999994 5666666652           38999999999988765     79999999997421  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                       .....+.++..+++|+.++..+++++.+.  ...++|++||...+......+.                         .
T Consensus        69 -~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~-------------------------~  120 (321)
T 1e6u_A           69 -IVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAKQPM-------------------------A  120 (321)
T ss_dssp             -HHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCCSSB-------------------------C
T ss_pred             -cchhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccHHHcCCCCCCCc-------------------------C
Confidence             01123456788999999999999988642  2359999999776432110000                         0


Q ss_pred             hcCCCcCCCCC-CchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         161 QDGSHTKGGWP-NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       161 ~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                      ++.....+..+ ...|+.+|.+.+.+++.++.+.       |++++.+.||.+-.+..
T Consensus       121 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          121 ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-------GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             GGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEESTTC
T ss_pred             ccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh-------CCCEEEEEeCCcCCcCC
Confidence            00000001222 3589999999999998877543       46799999999876654

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.57  E-value=2e-14  Score=133.52  Aligned_cols=170  Identities=12%  Similarity=0.053  Sum_probs=115.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh----------hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK----------LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~----------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|+||++++++|+++ +..|++++|.........+.          +..+|++|++++++++++.     ++|+||
T Consensus        16 VTGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-----~~D~Vi   89 (699)
T 1z45_A           16 VTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KIDSVI   89 (699)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCCEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-cCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-----CCCEEE
Confidence            7999999999999999999 46777777765432211111          1238999999999888753     799999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+||.....    ...+...+.+++|+.++..+++++..  ...++||++||.+.+......+.                
T Consensus        90 h~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~~iV~~SS~~vyg~~~~~~~----------------  147 (699)
T 1z45_A           90 HFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSATVYGDATRFPN----------------  147 (699)
T ss_dssp             ECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGGGCCGGGSTT----------------
T ss_pred             ECCcccCcC----ccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECcHHHhCCCccccc----------------
Confidence            999975321    11233467899999999999987753  13469999999765432110000                


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcc
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYV  212 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v  212 (230)
                               ....++..+..+...|+.+|.+.+.+++.++.+.. .    ++++..+.|+.+
T Consensus       148 ---------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~----g~~~~ilR~~~v  195 (699)
T 1z45_A          148 ---------MIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDK-K----SWKFAILRYFNP  195 (699)
T ss_dssp             ---------CCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHST-T----SCEEEEEEECEE
T ss_pred             ---------cCCccccCCCCCCChHHHHHHHHHHHHHHHHHhcc-C----CCcEEEEEeccc
Confidence                     00001122334568999999999999998877652 2    466777777655

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.56  E-value=6.3e-15  Score=119.30  Aligned_cols=98  Identities=16%  Similarity=0.125  Sum_probs=72.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||+++++.|+++|...|++++|++++++....   .+..+|++|+++++++++       .+|+||||+|...
T Consensus        28 VtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~vv~~a~~~~  100 (236)
T 3qvo_A           28 ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQ-------GQDIVYANLTGED  100 (236)
T ss_dssp             EETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHT-------TCSEEEEECCSTT
T ss_pred             EEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCc
Confidence            799999999999999999954789999998876543211   122389999999998876       6899999998521


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHL  127 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~  127 (230)
                                 +           ...++.+++.|++.  ++||++||..++.
T Consensus       101 -----------~-----------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~  130 (236)
T 3qvo_A          101 -----------L-----------DIQANSVIAAMKACDVKRLIFVLSLGIYD  130 (236)
T ss_dssp             -----------H-----------HHHHHHHHHHHHHTTCCEEEEECCCCC--
T ss_pred             -----------h-----------hHHHHHHHHHHHHcCCCEEEEEecceecC
Confidence                       1           12244555555533  6999999988754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.55  E-value=1.9e-14  Score=114.57  Aligned_cols=155  Identities=14%  Similarity=0.152  Sum_probs=101.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh--hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK--LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~--~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      ||||+|+||++++++|+++ +..|++++|++++++.....  +..+|++|+++  +.       +.++|+||||+|....
T Consensus         5 VtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~-------~~~~d~vi~~ag~~~~   74 (221)
T 3ew7_A            5 IIGATGRAGSRILEEAKNR-GHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SD-------LSDQNVVVDAYGISPD   74 (221)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HH-------HTTCSEEEECCCSSTT
T ss_pred             EEcCCchhHHHHHHHHHhC-CCEEEEEEcCchhhhhccCCCeEEeccccChhh--hh-------hcCCCEEEECCcCCcc
Confidence            7999999999999999999 57899999998776654322  22389999887  22       2579999999998421


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                                   ...+|+.++..+++++...  ..+++|++||..++........                        
T Consensus        75 -------------~~~~~~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~------------------------  115 (221)
T 3ew7_A           75 -------------EAEKHVTSLDHLISVLNGT--VSPRLLVVGGAASLQIDEDGNT------------------------  115 (221)
T ss_dssp             -------------TTTSHHHHHHHHHHHHCSC--CSSEEEEECCCC----------------------------------
T ss_pred             -------------ccchHHHHHHHHHHHHHhc--CCceEEEEecceEEEcCCCCcc------------------------
Confidence                         1455777777777776431  2479999999888543221000                        


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                          ..+..+..+...|+.+|.+.+.+. .+..  ...    |++++.|.||.+-++
T Consensus       116 ----~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~----gi~~~ivrp~~v~g~  161 (221)
T 3ew7_A          116 ----LLESKGLREAPYYPTARAQAKQLE-HLKS--HQA----EFSWTYISPSAMFEP  161 (221)
T ss_dssp             -------------CCCSCCHHHHHHHHH-HHHT--TTT----TSCEEEEECSSCCCC
T ss_pred             ----ccccCCCCCHHHHHHHHHHHHHHH-HHHh--hcc----CccEEEEeCcceecC
Confidence                000112234577999999988863 2211  023    677999999999776

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.52  E-value=2.7e-14  Score=121.52  Aligned_cols=162  Identities=15%  Similarity=0.093  Sum_probs=110.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH--------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE--------KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~--------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|+||++++++|+++ +..|++++|..........        .+..+|+++..            +.++|+|||+
T Consensus        32 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~d~vih~   98 (343)
T 2b69_A           32 ITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------YIEVDQIYHL   98 (343)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------CCCCSEEEEC
T ss_pred             EEcCccHHHHHHHHHHHHC-CCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------hcCCCEEEEC
Confidence            7999999999999999999 5677778776432211111        12236777642            4579999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ||......    ..+.++..+++|+.++..+++++.+.   +.++|++||...+......+                   
T Consensus        99 A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~g~~~~~~-------------------  152 (343)
T 2b69_A           99 ASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDPEVHP-------------------  152 (343)
T ss_dssp             CSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSCSSSS-------------------
T ss_pred             ccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHHh---CCcEEEECcHHHhCCCCCCC-------------------
Confidence            99753211    12345778999999999999988642   34999999976543211000                   


Q ss_pred             HHHHHHHhhcCC---CcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         153 MNEFVELAQDGS---HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       153 ~~~~~~~~~~~~---~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                              .+++   ...+..+...|+.+|.+.+.+++.++.+.       |++++.+.||.+-++.
T Consensus       153 --------~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilrp~~v~G~~  204 (343)
T 2b69_A          153 --------QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE-------GVEVRVARIFNTFGPR  204 (343)
T ss_dssp             --------BCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECTT
T ss_pred             --------CcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh-------CCcEEEEEEcceeCcC
Confidence                    0000   00233455789999999999998877653       4668999999887764

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.52  E-value=4e-14  Score=130.84  Aligned_cols=167  Identities=14%  Similarity=0.073  Sum_probs=118.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH----hhhcccCCCHHH-HHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----KLQKLDILDKNS-IKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~----~~~~~D~s~~~~-v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|+||++++++|++++++.|++++|+.........    .+..+|++|.++ ++++++       ++|+|||+||.
T Consensus       320 VTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-------~~D~Vih~Aa~  392 (660)
T 1z7e_A          320 ILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAI  392 (660)
T ss_dssp             EETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH-------HCSEEEECCCC
T ss_pred             EEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc-------CCCEEEECcee
Confidence            799999999999999999855688888888765432211    122389998765 555554       58999999997


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ....    ...+.++..+++|+.++..+++++.+.   ++++|++||...+......+                      
T Consensus       393 ~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~---~~r~V~~SS~~vyg~~~~~~----------------------  443 (660)
T 1z7e_A          393 ATPI----EYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKY----------------------  443 (660)
T ss_dssp             CCTH----HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCSSS----------------------
T ss_pred             cCcc----ccccCHHHHHHhhhHHHHHHHHHHHHh---CCEEEEEecHHHcCCCCCcc----------------------
Confidence            5321    123456789999999999999998652   27999999976643211000                      


Q ss_pred             HHHHhhcCCCcC------C-CCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         156 FVELAQDGSHTK------G-GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       156 ~~~~~~~~~~~~------~-~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                             -++..      + ..+...|+.+|.+.+.+++.++.+.       |++++.+.||.+-++..
T Consensus       444 -------~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          444 -------FDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-------GLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             -------BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECSEESTTS
T ss_pred             -------cCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc-------CCCEEEECCCcccCCCc
Confidence                   00010      0 1234589999999999998887654       36699999999977653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.51  E-value=4.3e-14  Score=125.95  Aligned_cols=173  Identities=20%  Similarity=0.156  Sum_probs=111.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhc--CCeEEEEecCcchhHHHHH----------------------hh--hcccCC------C
Q psy7994           1 VTGANKGIGYGIVKGLIQQF--DGIIYLTARDASRGQEALE----------------------KL--QKLDIL------D   48 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g--~~~vi~~~r~~~~~~~~~~----------------------~~--~~~D~s------~   48 (230)
                      ||||+|+||.+++++|++++  +..|++++|+.+.......                      .+  ..+|++      +
T Consensus        78 VTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld  157 (478)
T 4dqv_A           78 LTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLD  157 (478)
T ss_dssp             EECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCC
T ss_pred             EECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCC
Confidence            79999999999999999984  4588888887664322110                      11  128998      5


Q ss_pred             HHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcccc
Q psy7994          49 KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLC  128 (230)
Q Consensus        49 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~  128 (230)
                      .+.++++++       ++|+||||||....        +.++..+++|+.|+..+++++..  ....++|++||...+..
T Consensus       158 ~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~--~~~~~~V~iSS~~v~~~  220 (478)
T 4dqv_A          158 QPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT--TKLKPFTYVSTADVGAA  220 (478)
T ss_dssp             HHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS--SSCCCEEEEEEGGGGTT
T ss_pred             HHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEEeehhhcCc
Confidence            556666655       68999999998532        34567899999999999998864  12358999999655321


Q ss_pred             ccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEec
Q psy7994         129 HVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVH  208 (230)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~  208 (230)
                      ......      .+..       ..+..     .............|+.+|.+.+.+++.++.+.       |++++.+.
T Consensus       221 ~~~~~~------~E~~-------~~~p~-----~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ivR  275 (478)
T 4dqv_A          221 IEPSAF------TEDA-------DIRVI-----SPTRTVDGGWAGGYGTSKWAGEVLLREANDLC-------ALPVAVFR  275 (478)
T ss_dssp             SCTTTC------CSSS-------CHHHH-----CCEEECCTTSEECHHHHHHHHHHHHHHHHHHH-------CCCEEEEE
T ss_pred             cCCCCc------CCcc-------ccccc-----CcccccccccccchHHHHHHHHHHHHHHHHHh-------CCCeEEEE
Confidence            110000      0000       00000     00000001112559999999999998877643       46699999


Q ss_pred             CCccccC
Q psy7994         209 PGYVNTD  215 (230)
Q Consensus       209 pG~v~t~  215 (230)
                      ||.|-.+
T Consensus       276 pg~v~G~  282 (478)
T 4dqv_A          276 CGMILAD  282 (478)
T ss_dssp             ECEEECC
T ss_pred             CceeeCC
Confidence            9998654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.51  E-value=2e-14  Score=120.08  Aligned_cols=166  Identities=17%  Similarity=0.073  Sum_probs=110.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||++++++|+++|.       +......  .-....+|++|++++.++++..     ++|+|||+|+....  
T Consensus        11 VtGatG~iG~~l~~~L~~~g~-------~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~-----~~d~Vih~A~~~~~--   74 (319)
T 4b8w_A           11 VTGGSGLVGKAIQKVVADGAG-------LPGEDWV--FVSSKDADLTDTAQTRALFEKV-----QPTHVIHLAAMVGG--   74 (319)
T ss_dssp             EETCSSHHHHHHHHHHHTTTC-------CTTCEEE--ECCTTTCCTTSHHHHHHHHHHS-----CCSEEEECCCCCCC--
T ss_pred             EECCCcHHHHHHHHHHHhcCC-------ccccccc--ccCceecccCCHHHHHHHHhhc-----CCCEEEECceeccc--
Confidence            799999999999999999965       1111000  0112248999999999988753     69999999998421  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                       .....+.....+++|+.++..+++++...  .-.++|++||...+..+...+.                         .
T Consensus        75 -~~~~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~~~~-------------------------~  126 (319)
T 4b8w_A           75 -LFRNIKYNLDFWRKNVHMNDNVLHSAFEV--GARKVVSCLSTCIFPDKTTYPI-------------------------D  126 (319)
T ss_dssp             -HHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEECCGGGSCSSCCSSB-------------------------C
T ss_pred             -ccccccCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEEcchhhcCCCCCCCc-------------------------c
Confidence             11223456778999999999999988532  2358999999866442211100                         0


Q ss_pred             hcCCCcCCCCCC-chhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         161 QDGSHTKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       161 ~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                      ++.....+..+. ..|+.+|.+.+.+++.++.+.       |++++.+.|+.+-.+..
T Consensus       127 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          127 ETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY-------GCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             GGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECTTC
T ss_pred             ccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-------CCCEEEEeeccccCCCC
Confidence            000000022222 369999999999998877654       46688899998866543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.45  E-value=6e-13  Score=110.14  Aligned_cols=139  Identities=12%  Similarity=0.085  Sum_probs=103.2

Q ss_pred             CCCCCCcHHHHHHHHHHHh-cCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+|+||++++++|+++ +++.|+.++|++++.+....   .+..+|++|++++.++++       ++|+|||++|..
T Consensus         5 VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~   77 (287)
T 2jl1_A            5 VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFA-------GVSKLLFISGPH   77 (287)
T ss_dssp             ETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTT-------TCSEEEECCCCC
T ss_pred             EEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHh-------cCCEEEEcCCCC
Confidence            7999999999999999998 23577778888776654322   223489999998887765       689999999962


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      .       . +      ++|+.++..+++++..  ...++||++||.....                             
T Consensus        78 ~-------~-~------~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~~~~~-----------------------------  112 (287)
T 2jl1_A           78 Y-------D-N------TLLIVQHANVVKAARD--AGVKHIAYTGYAFAEE-----------------------------  112 (287)
T ss_dssp             S-------C-H------HHHHHHHHHHHHHHHH--TTCSEEEEEEETTGGG-----------------------------
T ss_pred             c-------C-c------hHHHHHHHHHHHHHHH--cCCCEEEEECCCCCCC-----------------------------
Confidence            1       1 1      5789999999998853  1236999999976521                             


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                    ....|+.+|.+.+.+++.       .    |++++.+.||++.+++
T Consensus       113 --------------~~~~y~~~K~~~E~~~~~-------~----~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          113 --------------SIIPLAHVHLATEYAIRT-------T----NIPYTFLRNALYTDFF  147 (287)
T ss_dssp             --------------CCSTHHHHHHHHHHHHHH-------T----TCCEEEEEECCBHHHH
T ss_pred             --------------CCCchHHHHHHHHHHHHH-------c----CCCeEEEECCEecccc
Confidence                          114799999999988742       2    5778889998876543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.42  E-value=4.9e-13  Score=119.85  Aligned_cols=170  Identities=15%  Similarity=0.104  Sum_probs=112.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH---HHHHh------------------hhcccCCCHHHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ---EALEK------------------LQKLDILDKNSIKALHDHL   59 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~---~~~~~------------------~~~~D~s~~~~v~~~~~~~   59 (230)
                      ||||+|+||.+++++|.++ +..|+++.|+..+..   ...+.                  +..+|+++++.+.      
T Consensus       155 VTGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~------  227 (508)
T 4f6l_B          155 LTGATGFLGAYLIEALQGY-SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV------  227 (508)
T ss_dssp             ESCTTSHHHHHHHHHTBTT-EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC------
T ss_pred             EECCccchHHHHHHHHHhc-CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC------
Confidence            7999999999999999877 668888888776321   11111                  1127999988777      


Q ss_pred             HhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHh
Q psy7994          60 EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKL  139 (230)
Q Consensus        60 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~  139 (230)
                        ...++|+|||||+...       ....++..+++|+.++..+++++.+   ...++|++||... ......+.    .
T Consensus       228 --~~~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~v-G~~~~~~~----~  290 (508)
T 4f6l_B          228 --LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GTYFDIDT----E  290 (508)
T ss_dssp             --CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCT-TSEECTTC----S
T ss_pred             --CccCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhh-ccCCccCC----c
Confidence              3468999999999752       2245677889999999999999875   4579999999876 21100000    0


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         140 LHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                      ..+.                . ..+...+..+...|+.+|.+.+.+++.++.    .    |++++.+.||.+-.+....
T Consensus       291 ~~~~----------------~-E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~----gi~~~ilRp~~v~G~~~~~  345 (508)
T 4f6l_B          291 DVTF----------------S-EADVYKGQLLTSPYTRSKFYSELKVLEAVN----N----GLDGRIVRVGNLTSPYNGR  345 (508)
T ss_dssp             CCEE----------------C-TTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----T----TCEEEEEEECCEESCSSSC
T ss_pred             Cccc----------------c-cccccccccCCCcHHHHHHHHHHHHHHHHH----c----CCCEEEEecceeccCCCCC
Confidence            0000                0 000011122568999999999998876542    3    6889999999987765443

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.42  E-value=1.8e-12  Score=108.03  Aligned_cols=147  Identities=11%  Similarity=-0.053  Sum_probs=100.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHH--HHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQE--ALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~--~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||+|+||.+++++|+++|...|+.++|++++...  ...   ++..+|++|++++.++++       .+|+|||++|.
T Consensus        10 VtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~   82 (299)
T 2wm3_A           10 VFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALN-------GAYATFIVTNY   82 (299)
T ss_dssp             EETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEEECCCH
T ss_pred             EECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHh-------cCCEEEEeCCC
Confidence            799999999999999999954788889998765431  111   122389999999888775       69999999985


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNE  155 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (230)
                      ....            ....|+.++..+++++..  ...++||++|+..... .                          
T Consensus        83 ~~~~------------~~~~~~~~~~~~~~aa~~--~gv~~iv~~S~~~~~~-~--------------------------  121 (299)
T 2wm3_A           83 WESC------------SQEQEVKQGKLLADLARR--LGLHYVVYSGLENIKK-L--------------------------  121 (299)
T ss_dssp             HHHT------------CHHHHHHHHHHHHHHHHH--HTCSEEEECCCCCHHH-H--------------------------
T ss_pred             Cccc------------cchHHHHHHHHHHHHHHH--cCCCEEEEEcCccccc-c--------------------------
Confidence            3110            123456666666666532  1236899965533211 0                          


Q ss_pred             HHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                 .+..+...|..+|.+++.+.+.       .    |++++.+.||++-+++.
T Consensus       122 -----------~~~~~~~~y~~sK~~~e~~~~~-------~----gi~~~ilrp~~~~~~~~  161 (299)
T 2wm3_A          122 -----------TAGRLAAAHFDGKGEVEEYFRD-------I----GVPMTSVRLPCYFENLL  161 (299)
T ss_dssp             -----------TTTSCCCHHHHHHHHHHHHHHH-------H----TCCEEEEECCEEGGGGG
T ss_pred             -----------CCCcccCchhhHHHHHHHHHHH-------C----CCCEEEEeecHHhhhch
Confidence                       0111236899999999988753       2    47799999999877653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.40  E-value=2.2e-13  Score=114.20  Aligned_cols=156  Identities=17%  Similarity=0.026  Sum_probs=104.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch----hHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR----GQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~----~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||.+++++|+++ ++.|+.++|+...    ......       ++..+|++                 ++|+|
T Consensus        12 VtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------------~~d~v   73 (321)
T 3vps_A           12 ITGGAGFIGGHLARALVAS-GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------------DVRLV   73 (321)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------------TEEEE
T ss_pred             EECCCChHHHHHHHHHHHC-CCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------------cCCEE
Confidence            7999999999999999999 5677788886651    111100       01112332                 79999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||+||......    ..+.....++ |+.++..+++++...  ...++|++||...+......                 
T Consensus        74 i~~a~~~~~~~----~~~~~~~~~~-n~~~~~~ll~a~~~~--~v~~~v~~SS~~v~~~~~~~-----------------  129 (321)
T 3vps_A           74 YHLASHKSVPR----SFKQPLDYLD-NVDSGRHLLALCTSV--GVPKVVVGSTCEVYGQADTL-----------------  129 (321)
T ss_dssp             EECCCCCCHHH----HTTSTTTTHH-HHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCSSS-----------------
T ss_pred             EECCccCChHH----HHhCHHHHHH-HHHHHHHHHHHHHHc--CCCeEEEecCHHHhCCCCCC-----------------
Confidence            99999853211    1122334566 999999999988532  23699999997764432110                 


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCe-EEEEecCCccccCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDL-VVNCVHPGYVNTDMS  217 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i-~v~~v~pG~v~t~~~  217 (230)
                                  .-++..+..+...|+.+|.+.+.+++.++.+.       |+ +++.+.|+.+-.+..
T Consensus       130 ------------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~ilRp~~v~G~~~  179 (321)
T 3vps_A          130 ------------PTPEDSPLSPRSPYAASKVGLEMVAGAHQRAS-------VAPEVGIVRFFNVYGPGE  179 (321)
T ss_dssp             ------------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS-------SSCEEEEEEECEEECTTC
T ss_pred             ------------CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-------CCCceEEEEeccccCcCC
Confidence                        01223344567899999999999998877653       45 688899998876653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.39  E-value=6.7e-14  Score=116.11  Aligned_cols=154  Identities=13%  Similarity=0.005  Sum_probs=105.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||| +|+||.++++.|+++ +..|+.++|+.+.+... -.+..+|++|.+++.++++      +++|+|||+||..    
T Consensus         8 VtG-aG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~-~~~~~~Dl~d~~~~~~~~~------~~~d~vih~a~~~----   74 (286)
T 3gpi_A            8 IAG-CGDLGLELARRLTAQ-GHEVTGLRRSAQPMPAG-VQTLIADVTRPDTLASIVH------LRPEILVYCVAAS----   74 (286)
T ss_dssp             EEC-CSHHHHHHHHHHHHT-TCCEEEEECTTSCCCTT-CCEEECCTTCGGGCTTGGG------GCCSEEEECHHHH----
T ss_pred             EEC-CCHHHHHHHHHHHHC-CCEEEEEeCCccccccC-CceEEccCCChHHHHHhhc------CCCCEEEEeCCCC----
Confidence            799 599999999999999 56788888877654211 1222489999999887765      3699999999963    


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                           ....+..+++|+.++..+++++..  ...+++|++||...+......+                           
T Consensus        75 -----~~~~~~~~~~n~~~~~~ll~a~~~--~~~~~~v~~SS~~vyg~~~~~~---------------------------  120 (286)
T 3gpi_A           75 -----EYSDEHYRLSYVEGLRNTLSALEG--APLQHVFFVSSTGVYGQEVEEW---------------------------  120 (286)
T ss_dssp             -----HHC-----CCSHHHHHHHHHHTTT--SCCCEEEEEEEGGGCCCCCSSE---------------------------
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHhh--CCCCEEEEEcccEEEcCCCCCC---------------------------
Confidence                 244567889999999999998863  2236999999986644221100                           


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                        -++..+..+...|+.+|.+.+.+ +..            ++++.+.|+.+-.+.
T Consensus       121 --~~E~~~~~p~~~Y~~sK~~~E~~-~~~------------~~~~ilR~~~v~G~~  161 (286)
T 3gpi_A          121 --LDEDTPPIAKDFSGKRMLEAEAL-LAA------------YSSTILRFSGIYGPG  161 (286)
T ss_dssp             --ECTTSCCCCCSHHHHHHHHHHHH-GGG------------SSEEEEEECEEEBTT
T ss_pred             --CCCCCCCCCCChhhHHHHHHHHH-Hhc------------CCeEEEecccccCCC
Confidence              02233455668999999998887 432            226778888775553

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.39  E-value=1.7e-12  Score=107.25  Aligned_cols=136  Identities=14%  Similarity=0.158  Sum_probs=96.8

Q ss_pred             CCCCCCcHHHHHHHHHHHh-cCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+|+||.++++.|+++ +++.|+.++|++++.+....   .+..+|++|++++.++++       ++|+|||++|..
T Consensus         4 VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~   76 (286)
T 2zcu_A            4 ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQ-------GVEKLLLISSSE   76 (286)
T ss_dssp             EESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTT-------TCSEEEECC---
T ss_pred             EEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCC
Confidence            7999999999999999997 23577778888776554322   123489999998887764       689999999952


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      .                ..|+.++..+++++..  ...++||++||.....                             
T Consensus        77 ~----------------~~~~~~~~~l~~a~~~--~~~~~~v~~Ss~~~~~-----------------------------  109 (286)
T 2zcu_A           77 V----------------GQRAPQHRNVINAAKA--AGVKFIAYTSLLHADT-----------------------------  109 (286)
T ss_dssp             ---------------------CHHHHHHHHHHH--HTCCEEEEEEETTTTT-----------------------------
T ss_pred             c----------------hHHHHHHHHHHHHHHH--cCCCEEEEECCCCCCC-----------------------------
Confidence            1                1367788888877743  1236999999976631                             


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                    ....|+.+|.+.+.+++.       .    |++++.+.||++.++
T Consensus       110 --------------~~~~y~~sK~~~e~~~~~-------~----~~~~~ilrp~~~~~~  143 (286)
T 2zcu_A          110 --------------SPLGLADEHIETEKMLAD-------S----GIVYTLLRNGWYSEN  143 (286)
T ss_dssp             --------------CCSTTHHHHHHHHHHHHH-------H----CSEEEEEEECCBHHH
T ss_pred             --------------CcchhHHHHHHHHHHHHH-------c----CCCeEEEeChHHhhh
Confidence                          115799999999988743       2    577999999987654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.38  E-value=1.4e-12  Score=112.03  Aligned_cols=133  Identities=18%  Similarity=0.086  Sum_probs=102.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||++++++|+++|...|+..+|+                +|+++++++++       ++|+|||+||...+  
T Consensus         5 VtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------~d~~~l~~~~~-------~~d~Vih~a~~~~~--   59 (369)
T 3st7_A            5 ITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------TKEEELESALL-------KADFIVHLAGVNRP--   59 (369)
T ss_dssp             EETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------CCHHHHHHHHH-------HCSEEEECCCSBCT--
T ss_pred             EECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------CCHHHHHHHhc-------cCCEEEECCcCCCC--
Confidence            799999999999999999955366665544                67888888876       49999999997532  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                            +.+...+++|+.++..+++++... ....++|++||...+.                                 
T Consensus        60 ------~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~---------------------------------   99 (369)
T 3st7_A           60 ------EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ---------------------------------   99 (369)
T ss_dssp             ------TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS---------------------------------
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC---------------------------------
Confidence                  344567889999999999988531 1113899999976632                                 


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                 ...|+.+|.+.+.+++.++.+.+       +++..+.|+.+-.+.
T Consensus       100 -----------~~~Y~~sK~~~E~~~~~~~~~~g-------~~~~i~R~~~v~G~~  137 (369)
T 3st7_A          100 -----------DNPYGESKLQGEQLLREYAEEYG-------NTVYIYRWPNLFGKW  137 (369)
T ss_dssp             -----------CSHHHHHHHHHHHHHHHHHHHHC-------CCEEEEEECEEECTT
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHhC-------CCEEEEECCceeCCC
Confidence                       37899999999999988877643       447788888776554

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.33  E-value=8.8e-12  Score=106.80  Aligned_cols=139  Identities=16%  Similarity=0.106  Sum_probs=97.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchh--HHHHH----hhhccc-CCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRG--QEALE----KLQKLD-ILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~--~~~~~----~~~~~D-~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||+|+||.++++.|+++| +.|++++|++++.  +....    ++..+| ++|++++.++++       .+|+||||+
T Consensus        10 VtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~-------~~d~Vi~~a   81 (352)
T 1xgk_A           10 VVGATGRQGASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE-------GAHLAFINT   81 (352)
T ss_dssp             EESTTSHHHHHHHHHHHHTT-CCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT-------TCSEEEECC
T ss_pred             EECCCCHHHHHHHHHHHhCC-CEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh-------cCCEEEEcC
Confidence            79999999999999999984 6777888887655  22211    122389 999999888775       689999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCc-cccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      +...               .+.|..+ ..+++++..  .. .++||++||... .+                        
T Consensus        82 ~~~~---------------~~~~~~~-~~l~~aa~~--~g~v~~~V~~SS~~~~~~------------------------  119 (352)
T 1xgk_A           82 TSQA---------------GDEIAIG-KDLADAAKR--AGTIQHYIYSSMPDHSLY------------------------  119 (352)
T ss_dssp             CSTT---------------SCHHHHH-HHHHHHHHH--HSCCSEEEEEECCCGGGT------------------------
T ss_pred             CCCC---------------cHHHHHH-HHHHHHHHH--cCCccEEEEeCCcccccc------------------------
Confidence            7531               0235555 556665532  12 369999999862 21                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                      +..+...|..+|.+.+.+++.+           |++++.|.||++.+..
T Consensus       120 ----------------~~~~~~~y~~sK~~~E~~~~~~-----------gi~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          120 ----------------GPWPAVPMWAPKFTVENYVRQL-----------GLPSTFVYAGIYNNNF  157 (352)
T ss_dssp             ----------------SSCCCCTTTHHHHHHHHHHHTS-----------SSCEEEEEECEEGGGC
T ss_pred             ----------------CCCCCccHHHHHHHHHHHHHHc-----------CCCEEEEecceecCCc
Confidence                            1123478999999999988542           4668888899876554

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.29  E-value=5.3e-11  Score=101.26  Aligned_cols=140  Identities=13%  Similarity=0.119  Sum_probs=98.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc----hhHHHHHhh-------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS----RGQEALEKL-------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~----~~~~~~~~~-------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||+++++.|+++| +.|+++.|+..    +.+. .+.+       ..+|++|++++.+++++.     ++|+|
T Consensus        15 VtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~-~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d~V   87 (346)
T 3i6i_A           15 IAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKI-FKALEDKGAIIVYGLINEQEAMEKILKEH-----EIDIV   87 (346)
T ss_dssp             EECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHH-HHHHHHTTCEEEECCTTCHHHHHHHHHHT-----TCCEE
T ss_pred             EECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHH-HHHHHhCCcEEEEeecCCHHHHHHHHhhC-----CCCEE
Confidence            79999999999999999995 67888888762    2221 1122       238999999999988763     79999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||++|..                   |+.++..+++++...  . -.++|+ |+.+...                     
T Consensus        88 i~~a~~~-------------------n~~~~~~l~~aa~~~--g~v~~~v~-S~~g~~~---------------------  124 (346)
T 3i6i_A           88 VSTVGGE-------------------SILDQIALVKAMKAV--GTIKRFLP-SEFGHDV---------------------  124 (346)
T ss_dssp             EECCCGG-------------------GGGGHHHHHHHHHHH--CCCSEEEC-SCCSSCT---------------------
T ss_pred             EECCchh-------------------hHHHHHHHHHHHHHc--CCceEEee-cccCCCC---------------------
Confidence            9999972                   788888888887531  2 236654 4332211                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                     ++..+..+...|+.+|.+++.+.+.       .    |+.+..+.||++-..+
T Consensus       125 ---------------~e~~~~~p~~~y~~sK~~~e~~l~~-------~----g~~~tivrpg~~~g~~  166 (346)
T 3i6i_A          125 ---------------NRADPVEPGLNMYREKRRVRQLVEE-------S----GIPFTYICCNSIASWP  166 (346)
T ss_dssp             ---------------TTCCCCTTHHHHHHHHHHHHHHHHH-------T----TCCBEEEECCEESSCC
T ss_pred             ---------------CccCcCCCcchHHHHHHHHHHHHHH-------c----CCCEEEEEeccccccc
Confidence                           1122334568999999998887643       2    4668889999876654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.28  E-value=1.6e-11  Score=101.80  Aligned_cols=102  Identities=14%  Similarity=0.172  Sum_probs=74.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH---HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL---EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~---~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||++++++|.++++..|+++.|++++.....   -++..+|++|++++.++++       ++|+|||++|...
T Consensus         5 VtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~   77 (289)
T 3e48_A            5 LTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFK-------GMDTVVFIPSIIH   77 (289)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCC
T ss_pred             EEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCCc
Confidence            79999999999999999985678888889877654321   1222389999999888775       7999999999742


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      .              ...|+.++..+++++..  ..-++||++||...
T Consensus        78 ~--------------~~~~~~~~~~l~~aa~~--~gv~~iv~~Ss~~~  109 (289)
T 3e48_A           78 P--------------SFKRIPEVENLVYAAKQ--SGVAHIIFIGYYAD  109 (289)
T ss_dssp             S--------------HHHHHHHHHHHHHHHHH--TTCCEEEEEEESCC
T ss_pred             c--------------chhhHHHHHHHHHHHHH--cCCCEEEEEcccCC
Confidence            1              12356666666666632  12269999999654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.25  E-value=3.1e-11  Score=108.42  Aligned_cols=159  Identities=12%  Similarity=0.005  Sum_probs=107.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|+||.++++.|+++ +..|+.++|+..+.+     ...+|+.+..         .+.+.++|+|||+||..... 
T Consensus       152 VTGatG~IG~~l~~~L~~~-G~~V~~l~R~~~~~~-----~v~~d~~~~~---------~~~l~~~D~Vih~A~~~~~~-  215 (516)
T 3oh8_A          152 ITGSRGLVGRALTAQLQTG-GHEVIQLVRKEPKPG-----KRFWDPLNPA---------SDLLDGADVLVHLAGEPIFG-  215 (516)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESSSCCTT-----CEECCTTSCC---------TTTTTTCSEEEECCCC-----
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCCCCcc-----ceeecccchh---------HHhcCCCCEEEECCCCcccc-
Confidence            7999999999999999999 568888888876532     1236765431         22345899999999985322 


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccc-cccchHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHL-CHVTSEALKKKLLHEIKSVEELSALMNEFVEL  159 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (230)
                        ..+.+..+..+++|+.++..+++++... ...+++|++||...+. .....+                          
T Consensus       216 --~~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~~~~~~~--------------------------  266 (516)
T 3oh8_A          216 --RFNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGHDRGDEI--------------------------  266 (516)
T ss_dssp             ---CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCSEEEEEE--------------------------
T ss_pred             --ccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecCCCCCCc--------------------------
Confidence              3456678889999999999999984321 1236999999976644 111100                          


Q ss_pred             hhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         160 AQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                         -++..+. +...|+.+|...+.+...    ....    |++++.+.||.+-++.
T Consensus       267 ---~~E~~~~-~~~~y~~~~~~~E~~~~~----~~~~----gi~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          267 ---LTEESES-GDDFLAEVCRDWEHATAP----ASDA----GKRVAFIRTGVALSGR  311 (516)
T ss_dssp             ---ECTTSCC-CSSHHHHHHHHHHHTTHH----HHHT----TCEEEEEEECEEEBTT
T ss_pred             ---cCCCCCC-CcChHHHHHHHHHHHHHH----HHhC----CCCEEEEEeeEEECCC
Confidence               0111222 557888888877765432    2233    6889999999987653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.22  E-value=6e-11  Score=98.02  Aligned_cols=146  Identities=13%  Similarity=-0.055  Sum_probs=96.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |||+ |.||.++++.|+++ ++.|+.++|++.+......   ++..+|++|.+            +.++|+|||+|+...
T Consensus        10 VtGa-G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~------------~~~~d~vi~~a~~~~   75 (286)
T 3ius_A           10 SFGH-GYTARVLSRALAPQ-GWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS------------LDGVTHLLISTAPDS   75 (286)
T ss_dssp             EETC-CHHHHHHHHHHGGG-TCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC------------CTTCCEEEECCCCBT
T ss_pred             EECC-cHHHHHHHHHHHHC-CCEEEEEEcChhhhhhHhhCCCeEEEecccccc------------cCCCCEEEECCCccc
Confidence            7998 99999999999999 5688888998877655432   12238998833            458999999999753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      ..       +..          ...+++++...-..-.++|++||...+..+...                         
T Consensus        76 ~~-------~~~----------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~-------------------------  113 (286)
T 3ius_A           76 GG-------DPV----------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGA-------------------------  113 (286)
T ss_dssp             TB-------CHH----------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTC-------------------------
T ss_pred             cc-------cHH----------HHHHHHHHHhhcCCceEEEEeecceecCCCCCC-------------------------
Confidence            21       111          122333332211223699999997654322110                         


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                          .-++..+..+...|+.+|.+.+.+++.+      .    |++++.+.|+.+-.+.
T Consensus       114 ----~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~----~~~~~ilRp~~v~G~~  158 (286)
T 3ius_A          114 ----WVDETTPLTPTAARGRWRVMAEQQWQAV------P----NLPLHVFRLAGIYGPG  158 (286)
T ss_dssp             ----EECTTSCCCCCSHHHHHHHHHHHHHHHS------T----TCCEEEEEECEEEBTT
T ss_pred             ----CcCCCCCCCCCCHHHHHHHHHHHHHHhh------c----CCCEEEEeccceECCC
Confidence                0122334455689999999999988665      2    5778999999886654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.20  E-value=2e-10  Score=95.77  Aligned_cols=139  Identities=14%  Similarity=0.117  Sum_probs=90.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-------chhHHHHH------hhhcccCCCHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-------SRGQEALE------KLQKLDILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-------~~~~~~~~------~~~~~D~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      ||||+|+||.++++.|+++| +.|++..|+.       ++.+....      ++..+|++|++++.++++       ++|
T Consensus         7 VtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------~~d   78 (307)
T 2gas_A            7 ILGPTGAIGRHIVWASIKAG-NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK-------QVD   78 (307)
T ss_dssp             EESTTSTTHHHHHHHHHHHT-CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EECCCchHHHHHHHHHHhCC-CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh-------CCC
Confidence            79999999999999999995 6777778876       33322111      122389999999888775       699


Q ss_pred             EEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      +|||++|...                   +.++..+++++..  .. -.++| . |..+...                  
T Consensus        79 ~vi~~a~~~~-------------------~~~~~~l~~aa~~--~g~v~~~v-~-S~~g~~~------------------  117 (307)
T 2gas_A           79 IVICAAGRLL-------------------IEDQVKIIKAIKE--AGNVKKFF-P-SEFGLDV------------------  117 (307)
T ss_dssp             EEEECSSSSC-------------------GGGHHHHHHHHHH--HCCCSEEE-C-SCCSSCT------------------
T ss_pred             EEEECCcccc-------------------cccHHHHHHHHHh--cCCceEEe-e-cccccCc------------------
Confidence            9999999742                   3445556665532  12 24676 3 3333110                  


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCC-CchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWP-NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                       ++..+..+ ...| .+|.+++.+.+.       .    |++++.+.||++.+.+.
T Consensus       118 -----------------~~~~~~~p~~~~y-~sK~~~e~~~~~-------~----~i~~~~lrp~~~~~~~~  160 (307)
T 2gas_A          118 -----------------DRHDAVEPVRQVF-EEKASIRRVIEA-------E----GVPYTYLCCHAFTGYFL  160 (307)
T ss_dssp             -----------------TSCCCCTTHHHHH-HHHHHHHHHHHH-------H----TCCBEEEECCEETTTTG
T ss_pred             -----------------ccccCCCcchhHH-HHHHHHHHHHHH-------c----CCCeEEEEcceeecccc
Confidence                             00111122 3689 999998887642       2    46688899998877653

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.17  E-value=5.4e-11  Score=101.46  Aligned_cols=113  Identities=16%  Similarity=0.063  Sum_probs=83.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC----CeEEEEecCcchhHHH--HHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD----GIIYLTARDASRGQEA--LEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~----~~vi~~~r~~~~~~~~--~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||+|+||.+++++|+++|.    ..|+.++|+.......  .-.+..+|++|++++.++++..    .++|+|||+||
T Consensus         6 VtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~d~vih~a~   81 (364)
T 2v6g_A            6 IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPL----TDVTHVFYVTW   81 (364)
T ss_dssp             EETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTC----TTCCEEEECCC
T ss_pred             EECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcC----CCCCEEEECCC
Confidence            799999999999999999952    6888888876543200  0012238999999888776532    24999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEE-------EecCCCcc
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVV-------NVSSSCGH  126 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii-------~~sS~~~~  126 (230)
                      ...         +.++..+++|+.++..+++++.+....-.++|       ++||...+
T Consensus        82 ~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vy  131 (364)
T 2v6g_A           82 ANR---------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESY  131 (364)
T ss_dssp             CCC---------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGT
T ss_pred             CCc---------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhc
Confidence            742         24678899999999999999976533335676       67776543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.10  E-value=9.1e-10  Score=91.96  Aligned_cols=94  Identities=19%  Similarity=0.177  Sum_probs=66.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-----hhHHHHH------hhhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-----RGQEALE------KLQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-----~~~~~~~------~~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|+||.++++.|+++| ..|+++.|+..     +.+....      ++..+|++|++++.++++       ++|+|
T Consensus         9 VtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-------~~d~v   80 (313)
T 1qyd_A            9 IVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QVDVV   80 (313)
T ss_dssp             EESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TCSEE
T ss_pred             EEcCCcHHHHHHHHHHHhCC-CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-------CCCEE
Confidence            79999999999999999995 67778888743     2221110      122389999999888775       69999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEE
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVN  119 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~  119 (230)
                      ||++|.....               .|+.++..+++++..  .. -++||+
T Consensus        81 i~~a~~~~~~---------------~~~~~~~~l~~aa~~--~g~v~~~v~  114 (313)
T 1qyd_A           81 ISALAGGVLS---------------HHILEQLKLVEAIKE--AGNIKRFLP  114 (313)
T ss_dssp             EECCCCSSSS---------------TTTTTHHHHHHHHHH--SCCCSEEEC
T ss_pred             EECCccccch---------------hhHHHHHHHHHHHHh--cCCCceEEe
Confidence            9999975321               267777788877743  12 247774

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.05  E-value=1.5e-09  Score=90.34  Aligned_cols=68  Identities=22%  Similarity=0.274  Sum_probs=51.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchh--H---HHHHh-------hhcccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRG--Q---EALEK-------LQKLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~--~---~~~~~-------~~~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+|+||.++++.|+++| +.|+++.|+....  .   .....       +..+|++|++++.++++       ++|+
T Consensus         9 VtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------~~d~   80 (308)
T 1qyc_A            9 LIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------NVDV   80 (308)
T ss_dssp             EESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------TCSE
T ss_pred             EEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------CCCE
Confidence            79999999999999999995 6777788874321  1   11111       12389999999888876       5999


Q ss_pred             EEEccCCc
Q psy7994          69 LVNNAAIA   76 (230)
Q Consensus        69 lv~~ag~~   76 (230)
                      |||++|..
T Consensus        81 vi~~a~~~   88 (308)
T 1qyc_A           81 VISTVGSL   88 (308)
T ss_dssp             EEECCCGG
T ss_pred             EEECCcch
Confidence            99999963

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.04  E-value=8e-10  Score=92.73  Aligned_cols=68  Identities=22%  Similarity=0.241  Sum_probs=52.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHH----H--hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEAL----E--KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~----~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||+|+||.++++.|+++| +.|+++.|+++ +.+...    .  ++..+|++|++++.++++       .+|+|||++
T Consensus        16 VtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~vi~~a   87 (318)
T 2r6j_A           16 IFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-------KVDVVISAL   87 (318)
T ss_dssp             EETTTSTTHHHHHHHHHHTT-CCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEEECC
T ss_pred             EECCCchHHHHHHHHHHHCC-CcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-------CCCEEEECC
Confidence            79999999999999999995 67777888764 322211    1  122389999999888875       699999999


Q ss_pred             CCc
Q psy7994          74 AIA   76 (230)
Q Consensus        74 g~~   76 (230)
                      +..
T Consensus        88 ~~~   90 (318)
T 2r6j_A           88 AFP   90 (318)
T ss_dssp             CGG
T ss_pred             chh
Confidence            963

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.04  E-value=1.6e-09  Score=90.91  Aligned_cols=68  Identities=13%  Similarity=0.161  Sum_probs=51.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-c-----hhHHHH----H--hhhcccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-S-----RGQEAL----E--KLQKLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~-----~~~~~~----~--~~~~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+|+||.++++.|+++| +.|++++|+. +     +.+...    .  ++..+|++|++++.++++       .+|+
T Consensus         9 VtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-------~~d~   80 (321)
T 3c1o_A            9 IYGGTGYIGKFMVRASLSFS-HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-------QVDI   80 (321)
T ss_dssp             EETTTSTTHHHHHHHHHHTT-CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             EEcCCchhHHHHHHHHHhCC-CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-------CCCE
Confidence            79999999999999999995 6777788875 2     222111    1  122389999999888875       5999


Q ss_pred             EEEccCCc
Q psy7994          69 LVNNAAIA   76 (230)
Q Consensus        69 lv~~ag~~   76 (230)
                      |||++|..
T Consensus        81 vi~~a~~~   88 (321)
T 3c1o_A           81 VISALPFP   88 (321)
T ss_dssp             EEECCCGG
T ss_pred             EEECCCcc
Confidence            99999963

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.03  E-value=1.7e-09  Score=89.92  Aligned_cols=109  Identities=14%  Similarity=0.012  Sum_probs=75.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||++++++|.++ ++.|+.+.|++.+.          ++.. +.+   .   .+.+..+|.+||+||......
T Consensus         5 VTGatGfIG~~L~~~L~~~-G~~V~~l~R~~~~~----------~~~~-~~~---~---~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            5 VGGGTGFIGTALTQLLNAR-GHEVTLVSRKPGPG----------RITW-DEL---A---ASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCCTT----------EEEH-HHH---H---HHCCCSCSEEEECCCCCSSCT
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCCCcC----------eeec-chh---h---HhhccCCCEEEEeccCcccch
Confidence            7999999999999999999 56777778876532          1111 111   1   123458999999999754333


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccc
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHL  127 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~  127 (230)
                      ....+.......++.|+.++..+.+++...-.+..++|+.||...+.
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg  113 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQ  113 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSC
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeec
Confidence            44456677778899999999999887754333445677777766544

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.01  E-value=3.6e-10  Score=95.86  Aligned_cols=151  Identities=16%  Similarity=0.113  Sum_probs=97.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC------eEEEEecCc--chhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG------IIYLTARDA--SRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~------~vi~~~r~~--~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|.||.+++..|+++|..      .|++.++.+  ++.+.....+..      .|+++.+++.+.+       ...
T Consensus         9 VtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~-------~~~   81 (327)
T 1y7t_A            9 VTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAF-------KDA   81 (327)
T ss_dssp             ESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT-------TTC
T ss_pred             EECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHh-------CCC
Confidence            7999999999999999998542      788888764  223322222221      3565544444443       369


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |+|||+||.....      .+...+.+++|+.++..+++++...-..+.+++++|+......+                 
T Consensus        82 D~Vih~Ag~~~~~------~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~-----------------  138 (327)
T 1y7t_A           82 DYALLVGAAPRKA------GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL-----------------  138 (327)
T ss_dssp             SEEEECCCCCCCT------TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH-----------------
T ss_pred             CEEEECCCcCCCC------CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH-----------------
Confidence            9999999985311      12345689999999999999887532134578877764311000                 


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhh
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQ  195 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~  195 (230)
                            ..     .+.   ..+.++...|+.+|...+.+.+.++..++.
T Consensus       139 ------~~-----~~~---~~~~~p~~~yg~tkl~~er~~~~~a~~~g~  173 (327)
T 1y7t_A          139 ------IA-----YKN---APGLNPRNFTAMTRLDHNRAKAQLAKKTGT  173 (327)
T ss_dssp             ------HH-----HHT---CTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             ------HH-----HHH---cCCCChhheeccchHHHHHHHHHHHHHhCc
Confidence                  00     000   112345577999999988888888876544

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.95  E-value=8.6e-11  Score=97.91  Aligned_cols=93  Identities=15%  Similarity=0.101  Sum_probs=71.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+||+|+++++.|+++|. .|++++|+.+++++..+++.        .+|++++++++++++       .+|+||||
T Consensus       124 VtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~DvlVn~  195 (287)
T 1lu9_A          124 VLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------GAHFVFTA  195 (287)
T ss_dssp             EETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------TCSEEEEC
T ss_pred             EECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------hCCEEEEC
Confidence            699999999999999999965 59999999888777665542        279999998877765       48999999


Q ss_pred             cCCcc-ccCCCCCCh-hHHHHHHHHhhhhHH
Q psy7994          73 AAIAF-KVNSSEPFG-SQALHTMRTNYFALI  101 (230)
Q Consensus        73 ag~~~-~~~~~~~~~-~~~~~~~~~n~~g~~  101 (230)
                      +|... +.+..+.+. +.++.++++|+.+++
T Consensus       196 ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          196 GAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             CCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             CCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            98642 222222333 556678999999987

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.50  E-value=5.4e-08  Score=77.98  Aligned_cols=70  Identities=13%  Similarity=0.165  Sum_probs=47.8

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      |||||+++|+.|+++|+ .|+++++... ++. ...+..+|+++   .+++++.+.+.++++|++|||||+....+
T Consensus        33 Sg~iG~aiA~~~~~~Ga-~V~l~~~~~~-l~~-~~g~~~~dv~~---~~~~~~~v~~~~~~~Dili~~Aav~d~~p  102 (226)
T 1u7z_A           33 SGKMGFAIAAAAARRGA-NVTLVSGPVS-LPT-PPFVKRVDVMT---ALEMEAAVNASVQQQNIFIGCAAVADYRA  102 (226)
T ss_dssp             CSHHHHHHHHHHHHTTC-EEEEEECSCC-CCC-CTTEEEEECCS---HHHHHHHHHHHGGGCSEEEECCBCCSEEE
T ss_pred             ccHHHHHHHHHHHHCCC-EEEEEECCcc-ccc-CCCCeEEccCc---HHHHHHHHHHhcCCCCEEEECCcccCCCC
Confidence            69999999999999955 5666655432 110 01112256655   55567777788899999999999875443

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.44  E-value=3.1e-07  Score=71.70  Aligned_cols=94  Identities=20%  Similarity=0.185  Sum_probs=66.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+||||.++++.+...| ..|+.+++++++.+...+ +.   .+|.++.+..+.+.+....  .++|++|+|+|.. 
T Consensus        44 V~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~-~g~~~~~d~~~~~~~~~~~~~~~~--~~~D~vi~~~g~~-  118 (198)
T 1pqw_A           44 IHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSR-LGVEYVGDSRSVDFADEILELTDG--YGVDVVLNSLAGE-  118 (198)
T ss_dssp             ETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHT-TCCSEEEETTCSTHHHHHHHHTTT--CCEEEEEECCCTH-
T ss_pred             EeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH-cCCCEEeeCCcHHHHHHHHHHhCC--CCCeEEEECCchH-
Confidence            68999999999999999885 578888888776654432 21   1577766554444433211  3699999999731 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               ..+..++.++++|++|.+++..
T Consensus       119 -------------------------~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          119 -------------------------AIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             -------------------------HHHHHHHTEEEEEEEEECSCGG
T ss_pred             -------------------------HHHHHHHHhccCCEEEEEcCCC
Confidence                                     1345556778889999998754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.37  E-value=6.8e-07  Score=75.51  Aligned_cols=95  Identities=11%  Similarity=0.086  Sum_probs=69.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |||++||||.++++.+...|. .|+++++++++++.. +++..   +|.++.+++.+.+.++..  +++|++|+|+|.. 
T Consensus       151 V~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~~~~~~~~--~~~d~vi~~~g~~-  225 (333)
T 1v3u_A          151 VSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYL-KQIGFDAAFNYKTVNSLEEALKKASP--DGYDCYFDNVGGE-  225 (333)
T ss_dssp             EESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH-HHTTCSEEEETTSCSCHHHHHHHHCT--TCEEEEEESSCHH-
T ss_pred             EecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-HhcCCcEEEecCCHHHHHHHHHHHhC--CCCeEEEECCChH-
Confidence            689999999999999998854 888899988777665 44322   677774556666665543  5899999999931 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               .++..++.++++|+++.++...+
T Consensus       226 -------------------------~~~~~~~~l~~~G~~v~~g~~~~  248 (333)
T 1v3u_A          226 -------------------------FLNTVLSQMKDFGKIAICGAISV  248 (333)
T ss_dssp             -------------------------HHHHHHTTEEEEEEEEECCCCC-
T ss_pred             -------------------------HHHHHHHHHhcCCEEEEEecccc
Confidence                                     12445567788899999987654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.35  E-value=9.4e-08  Score=76.77  Aligned_cols=73  Identities=16%  Similarity=0.147  Sum_probs=53.4

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCC
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNS   81 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~   81 (230)
                      ||++|.++|+.|+++ |+.|++++|.......   .-..+|+.+.++++++++.+.+.++++|++|+||++....+.
T Consensus        28 SG~mG~aiA~~~~~~-Ga~V~lv~~~~~~~~~---~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~p~  100 (232)
T 2gk4_A           28 TGHLGKIITETLLSA-GYEVCLITTKRALKPE---PHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAVSDYTPV  100 (232)
T ss_dssp             CCHHHHHHHHHHHHT-TCEEEEEECTTSCCCC---CCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSBCCSEEEE
T ss_pred             CCHHHHHHHHHHHHC-CCEEEEEeCCcccccc---CCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCccccccch
Confidence            788999999999999 5567677765432110   001256667778888888888889999999999998754443

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.31  E-value=6.1e-07  Score=67.90  Aligned_cols=70  Identities=16%  Similarity=0.069  Sum_probs=51.9

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchh------HHHHHhhh------cccCCCH--HHHHHHHHHHHhhcCCCcEEE
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRG------QEALEKLQ------KLDILDK--NSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~------~~~~~~~~------~~D~s~~--~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ++-++.++++.|+++|. .|++..|+....      .+..+...      .+|++++  ++++++++.+.+.+|+ |+||
T Consensus        25 s~~p~~a~a~~La~~Ga-~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGV-DVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTC-CEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             cCCCCHHHHHHHHHcCC-CEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            35578999999999955 555666654322      22222211      1899999  9999999999999999 9999


Q ss_pred             EccCCc
Q psy7994          71 NNAAIA   76 (230)
Q Consensus        71 ~~ag~~   76 (230)
                      ||+|..
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999974

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.31  E-value=1.3e-06  Score=74.30  Aligned_cols=96  Identities=15%  Similarity=0.123  Sum_probs=72.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++||||.++++.+...| ..|+.+++++++++... ++..   +|+++.+++.+.+.++...  ++|++|+|+|.. 
T Consensus       175 V~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~~~~~~~~~~~~~--~~D~vi~~~g~~-  249 (347)
T 2hcy_A          175 ISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFR-SIGGEVFIDFTKEKDIVGAVLKATDG--GAHGVINVSVSE-  249 (347)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHH-HTTCCEEEETTTCSCHHHHHHHHHTS--CEEEEEECSSCH-
T ss_pred             EECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHH-HcCCceEEecCccHhHHHHHHHHhCC--CCCEEEECCCcH-
Confidence            68999999999999888885 58888998888775443 3321   5777666777777766543  799999999852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                              ..++.+++.++++|++|.+++..+
T Consensus       250 ------------------------~~~~~~~~~l~~~G~iv~~g~~~~  273 (347)
T 2hcy_A          250 ------------------------AAIEASTRYVRANGTTVLVGMPAG  273 (347)
T ss_dssp             ------------------------HHHHHHTTSEEEEEEEEECCCCTT
T ss_pred             ------------------------HHHHHHHHHHhcCCEEEEEeCCCC
Confidence                                    135667778888999999987653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.26  E-value=1.5e-06  Score=61.60  Aligned_cols=67  Identities=19%  Similarity=0.190  Sum_probs=53.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh---hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK---LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~---~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+ |++|.++++.|.++|...|++.+|++++++.....   +..+|+++.+++.++++       ++|+||++++.
T Consensus        10 I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~~~~   79 (118)
T 3ic5_A           10 VVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALG-------GFDAVISAAPF   79 (118)
T ss_dssp             EECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTT-------TCSEEEECSCG
T ss_pred             EECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHc-------CCCEEEECCCc
Confidence            6899 99999999999999647899999998877765421   22379999887777653       79999999974

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.17  E-value=4.2e-06  Score=72.85  Aligned_cols=70  Identities=21%  Similarity=0.262  Sum_probs=59.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC--CeEEEEecCcchhHHHHHhhh----------cccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD--GIIYLTARDASRGQEALEKLQ----------KLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~--~~vi~~~r~~~~~~~~~~~~~----------~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      |+|+ |+||+++++.|+++|.  ..|++.+|+.++++...+.+.          .+|++|.+++++++++.     ++|+
T Consensus         6 IiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----~~Dv   79 (405)
T 4ina_A            6 QIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----KPQI   79 (405)
T ss_dssp             EECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----CCCE
Confidence            5788 8999999999999964  489999999998888776543          27999999999999876     7999


Q ss_pred             EEEccCCc
Q psy7994          69 LVNNAAIA   76 (230)
Q Consensus        69 lv~~ag~~   76 (230)
                      ||||+|..
T Consensus        80 Vin~ag~~   87 (405)
T 4ina_A           80 VLNIALPY   87 (405)
T ss_dssp             EEECSCGG
T ss_pred             EEECCCcc
Confidence            99999853

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.17  E-value=4.3e-06  Score=70.75  Aligned_cols=112  Identities=14%  Similarity=0.062  Sum_probs=76.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC------CeEEEEecC----cchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD------GIIYLTARD----ASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~------~~vi~~~r~----~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~   64 (230)
                      ||||+|.+|.+++..|+.++.      ..|++.+++    .++++.....+..      .|+....+..+.       +.
T Consensus        10 ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a-------l~   82 (329)
T 1b8p_A           10 VTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA-------FK   82 (329)
T ss_dssp             ESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH-------TT
T ss_pred             EECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH-------hC
Confidence            799999999999999999854      278888888    5545544444433      233332333333       34


Q ss_pred             CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          65 GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        65 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      ..|+||++||....      ....-.+.+..|+.....+++.+...-.++++||++|....
T Consensus        83 ~aD~Vi~~ag~~~~------~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~  137 (329)
T 1b8p_A           83 DADVALLVGARPRG------PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPAN  137 (329)
T ss_dssp             TCSEEEECCCCCCC------TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred             CCCEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchH
Confidence            78999999997532      11123457899999999999988764335678999986443

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.15  E-value=3.9e-06  Score=70.63  Aligned_cols=95  Identities=17%  Similarity=0.190  Sum_probs=68.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+||||.++++.+...| ..|+.+++++++++...+ +..   +|.++++..+.+.+....  .++|++|+|+|.. 
T Consensus       146 V~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~--~~~D~vi~~~g~~-  220 (327)
T 1qor_A          146 FHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALK-AGAWQVINYREEDLVERLKEITGG--KKVRVVYDSVGRD-  220 (327)
T ss_dssp             ESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHHHHHHHHTTT--CCEEEEEECSCGG-
T ss_pred             EECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH-cCCCEEEECCCccHHHHHHHHhCC--CCceEEEECCchH-
Confidence            68999999999999999885 588899998877765543 221   577766555555443221  3699999999921 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               ..+..++.++++|+++.+++..+
T Consensus       221 -------------------------~~~~~~~~l~~~G~iv~~g~~~~  243 (327)
T 1qor_A          221 -------------------------TWERSLDCLQRRGLMVSFGNSSG  243 (327)
T ss_dssp             -------------------------GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             -------------------------HHHHHHHHhcCCCEEEEEecCCC
Confidence                                     12445566788899999987655

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.12  E-value=2.9e-06  Score=72.97  Aligned_cols=97  Identities=15%  Similarity=0.107  Sum_probs=67.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |+||.++++.+...|. .|++.+|++++++...+.+..   +|.++.+++++++.       +.|+||+|+|...
T Consensus       171 ViGa-G~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-------~~DvVi~~~g~~~  241 (369)
T 2eez_A          171 ILGG-GTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-------HADLLIGAVLVPG  241 (369)
T ss_dssp             EECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-------HCSEEEECCC---
T ss_pred             EECC-CHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-------CCCEEEECCCCCc
Confidence            5788 9999999999999955 899999998877765543322   56677777766654       6899999999742


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      ..                   .+..+.+..++.|++++.||++++..+
T Consensus       242 ~~-------------------~~~li~~~~l~~mk~gg~iV~v~~~~g  270 (369)
T 2eez_A          242 AK-------------------APKLVTRDMLSLMKEGAVIVDVAVDQG  270 (369)
T ss_dssp             -----------------------CCSCHHHHTTSCTTCEEEECC----
T ss_pred             cc-------------------cchhHHHHHHHhhcCCCEEEEEecCCC
Confidence            10                   112334666778888899999998764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.12  E-value=3.5e-06  Score=71.86  Aligned_cols=96  Identities=13%  Similarity=0.036  Sum_probs=67.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |||++||||.+++..+...|...|+.+++++++++...+++..   +|.++.+..+ .+.++..  +++|++|+|+|.. 
T Consensus       166 I~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~-~~~~~~~--~~~d~vi~~~G~~-  241 (357)
T 2zb4_A          166 VSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAE-QLRESCP--AGVDVYFDNVGGN-  241 (357)
T ss_dssp             ESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHH-HHHHHCT--TCEEEEEESCCHH-
T ss_pred             EECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHH-HHHHhcC--CCCCEEEECCCHH-
Confidence            7999999999999988888554899999988877766553432   5766643333 3333322  2799999999931 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               ..+..++.++++|+++.++...+
T Consensus       242 -------------------------~~~~~~~~l~~~G~iv~~G~~~~  264 (357)
T 2zb4_A          242 -------------------------ISDTVISQMNENSHIILCGQISQ  264 (357)
T ss_dssp             -------------------------HHHHHHHTEEEEEEEEECCCGGG
T ss_pred             -------------------------HHHHHHHHhccCcEEEEECCccc
Confidence                                     13345566788899999876543

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.08  E-value=7.5e-06  Score=69.07  Aligned_cols=95  Identities=16%  Similarity=0.183  Sum_probs=67.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+||||.++++.+...| ..|+.+++++++++...+ +..   +|.++.+..+.+.+....  .++|++|+|+|.. 
T Consensus       151 V~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~-~g~~~~~d~~~~~~~~~i~~~~~~--~~~d~vi~~~g~~-  225 (333)
T 1wly_A          151 IHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARK-LGCHHTINYSTQDFAEVVREITGG--KGVDVVYDSIGKD-  225 (333)
T ss_dssp             ETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHHHHHHHHHTT--CCEEEEEECSCTT-
T ss_pred             EECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-cCCCEEEECCCHHHHHHHHHHhCC--CCCeEEEECCcHH-
Confidence            68999999999999999885 589999998877765533 221   577765555544443321  3699999999951 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               ..+..++.++++|+++.+++..+
T Consensus       226 -------------------------~~~~~~~~l~~~G~iv~~g~~~~  248 (333)
T 1wly_A          226 -------------------------TLQKSLDCLRPRGMCAAYGHASG  248 (333)
T ss_dssp             -------------------------THHHHHHTEEEEEEEEECCCTTC
T ss_pred             -------------------------HHHHHHHhhccCCEEEEEecCCC
Confidence                                     13344556788899999987553

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.05  E-value=4.2e-06  Score=70.92  Aligned_cols=95  Identities=14%  Similarity=0.124  Sum_probs=69.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++||||.+++..+...| ..|+.+++++++++...+++..   +|.++.+++.+.+.++..  +++|++|+|+|.. 
T Consensus       161 I~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~--~~~d~vi~~~g~~-  236 (345)
T 2j3h_A          161 VSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFP--NGIDIYFENVGGK-  236 (345)
T ss_dssp             ESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCT--TCEEEEEESSCHH-
T ss_pred             EECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhC--CCCcEEEECCCHH-
Confidence            68999999999999888885 5899999998887766544422   577665555555555532  4799999999841 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               .++..++.++++|+++.++...
T Consensus       237 -------------------------~~~~~~~~l~~~G~~v~~G~~~  258 (345)
T 2j3h_A          237 -------------------------MLDAVLVNMNMHGRIAVCGMIS  258 (345)
T ss_dssp             -------------------------HHHHHHTTEEEEEEEEECCCGG
T ss_pred             -------------------------HHHHHHHHHhcCCEEEEEcccc
Confidence                                     1445566778889999987543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.01  E-value=9.7e-08  Score=84.40  Aligned_cols=117  Identities=18%  Similarity=0.139  Sum_probs=65.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhc-------------CCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEH-------------GGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~-------------~~id   67 (230)
                      |||++ +||+++++.|+..| ..|+++++++.+........  +|+.+.+++...++-+....             -+.+
T Consensus       270 VtGaG-gIG~aiA~~Laa~G-A~Viv~D~~~~~a~~Aa~~g--~dv~~lee~~~~aDvVi~atG~~~vl~~e~l~~mk~g  345 (488)
T 3ond_A          270 VAGYG-DVGKGCAAALKQAG-ARVIVTEIDPICALQATMEG--LQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNN  345 (488)
T ss_dssp             EECCS-HHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHTT--CEECCGGGTTTTCSEEEECSSCSCSBCHHHHTTSCTT
T ss_pred             EECCC-HHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHhC--CccCCHHHHHHhcCEEEeCCCChhhhhHHHHHhcCCC
Confidence            68877 99999999999995 48888999887766554432  23333322211111000111             1345


Q ss_pred             EEEEccCCccccCCCCCChhHHHHH-------HHHhhhhHHHHH-HHhcccccCCceEEEecCCCcc
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHT-------MRTNYFALIDVC-DILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~-------~~~n~~g~~~l~-~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                      .+|+|+|..    ..+.+.+.++..       ++.|+.+.++.. +..+++|. .|+|||+||..|+
T Consensus       346 aiVvNaG~~----~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLa-eGRIVNlsS~~G~  407 (488)
T 3ond_A          346 AIVCNIGHF----DNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILA-EGRLMNLGCATGH  407 (488)
T ss_dssp             EEEEESSST----TTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEG-GGSCHHHHHSCCS
T ss_pred             eEEEEcCCC----CcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHc-CCcEEEEecCccc
Confidence            566677753    223444444443       334444433322 33444443 4999999998885

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.00  E-value=9.6e-06  Score=68.44  Aligned_cols=94  Identities=17%  Similarity=0.155  Sum_probs=67.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++||||.+++..+...| ..|+.+++++++++...+++..   +|.++++..+.+.+ +.  .+++|++|+|+|.. 
T Consensus       155 I~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~--~~~~d~vi~~~g~~-  229 (336)
T 4b7c_A          155 ISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKR-EC--PKGIDVFFDNVGGE-  229 (336)
T ss_dssp             ESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHH-HC--TTCEEEEEESSCHH-
T ss_pred             EECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHH-hc--CCCceEEEECCCcc-
Confidence            68999999999998888874 4899999998888766444432   56666554444333 22  24799999999841 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               ..+..++.++++|+++.++...
T Consensus       230 -------------------------~~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          230 -------------------------ILDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             -------------------------HHHHHHTTEEEEEEEEECCCGG
T ss_pred             -------------------------hHHHHHHHHhhCCEEEEEeecc
Confidence                                     2344556778899999998655

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.97  E-value=1.1e-05  Score=68.62  Aligned_cols=95  Identities=19%  Similarity=0.173  Sum_probs=65.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+||||.+++..+...| ..|+.+++++++++.. .++..   +|.++.+..+.+.+.. . ..++|++|+|+|...
T Consensus       168 V~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~d~vi~~~G~~~  243 (354)
T 2j8z_A          168 IHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMA-EKLGAAAGFNYKKEDFSEATLKFT-K-GAGVNLILDCIGGSY  243 (354)
T ss_dssp             ESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHT-T-TSCEEEEEESSCGGG
T ss_pred             EECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHH-HHcCCcEEEecCChHHHHHHHHHh-c-CCCceEEEECCCchH
Confidence            68999999999999888885 5888999988877665 33321   5666655444443322 1 136999999999520


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                                .+..++.++++|+++.++...+
T Consensus       244 --------------------------~~~~~~~l~~~G~iv~~G~~~~  265 (354)
T 2j8z_A          244 --------------------------WEKNVNCLALDGRWVLYGLMGG  265 (354)
T ss_dssp             --------------------------HHHHHHHEEEEEEEEECCCTTC
T ss_pred             --------------------------HHHHHHhccCCCEEEEEeccCC
Confidence                                      2333455678899999986554

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.96  E-value=3.3e-06  Score=75.86  Aligned_cols=90  Identities=20%  Similarity=0.224  Sum_probs=63.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |||| ||+|++++..|+++|. .|++++|+.++++...+.+..  .++.+   ++.+      ....+|+||||+|....
T Consensus       369 V~Ga-GGig~aia~~L~~~G~-~V~i~~R~~~~a~~la~~~~~~~~~~~d---l~~~------~~~~~DilVN~agvg~~  437 (523)
T 2o7s_A          369 VIGA-GGAGKALAYGAKEKGA-KVVIANRTYERALELAEAIGGKALSLTD---LDNY------HPEDGMVLANTTSMGMQ  437 (523)
T ss_dssp             EECC-SHHHHHHHHHHHHHCC--CEEEESSHHHHHHHHHHTTC-CEETTT---TTTC--------CCSEEEEECSSTTCT
T ss_pred             EECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceeeHHH---hhhc------cccCceEEEECCCCCCC
Confidence            6888 5999999999999965 888999999888887776632  22221   1100      11358999999997532


Q ss_pred             -----cCCCCCChhHHHHHHHHhhhhHH
Q psy7994          79 -----VNSSEPFGSQALHTMRTNYFALI  101 (230)
Q Consensus        79 -----~~~~~~~~~~~~~~~~~n~~g~~  101 (230)
                           .++.+.+.+.|..++++|+.+..
T Consensus       438 ~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          438 PNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             TCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             CCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence                 23455566778889999998753

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.87  E-value=7.9e-06  Score=67.75  Aligned_cols=64  Identities=17%  Similarity=0.374  Sum_probs=50.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      |||++ |+|+++++.|+++|  .|++.+|+.++++...+++.         .+|+++.          .+.++++|+|||
T Consensus       133 V~GaG-giG~aia~~L~~~G--~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~~~DilVn  199 (287)
T 1nvt_A          133 IYGAG-GAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLDGVDIIIN  199 (287)
T ss_dssp             EECCS-HHHHHHHHHHTSSS--EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCTTCCEEEE
T ss_pred             EECch-HHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhCCCCEEEE
Confidence            68887 99999999999995  99999999888777765543         2466552          345678999999


Q ss_pred             ccCCcc
Q psy7994          72 NAAIAF   77 (230)
Q Consensus        72 ~ag~~~   77 (230)
                      |+|...
T Consensus       200 ~ag~~~  205 (287)
T 1nvt_A          200 ATPIGM  205 (287)
T ss_dssp             CSCTTC
T ss_pred             CCCCCC
Confidence            999754

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.84  E-value=4.3e-05  Score=65.00  Aligned_cols=95  Identities=16%  Similarity=0.199  Sum_probs=67.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|+||.+++..+...| ..|+.+++++++++...+ +..   +|.++.+..+.+.+ +.  .+++|++|+|+|.. 
T Consensus       173 V~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~~~-~~--~~g~Dvvid~~g~~-  246 (353)
T 4dup_A          173 IHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACER-LGAKRGINYRSEDFAAVIKA-ET--GQGVDIILDMIGAA-  246 (353)
T ss_dssp             ESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHHHHHHH-HH--SSCEEEEEESCCGG-
T ss_pred             EEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHh-cCCCEEEeCCchHHHHHHHH-Hh--CCCceEEEECCCHH-
Confidence            68999999999999888884 589999999888765543 221   56666554444433 32  34799999999952 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                                               ..+..++.++++|+++.++...+.
T Consensus       247 -------------------------~~~~~~~~l~~~G~iv~~g~~~~~  270 (353)
T 4dup_A          247 -------------------------YFERNIASLAKDGCLSIIAFLGGA  270 (353)
T ss_dssp             -------------------------GHHHHHHTEEEEEEEEECCCTTCS
T ss_pred             -------------------------HHHHHHHHhccCCEEEEEEecCCC
Confidence                                     123345567888999999876653

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.83  E-value=3.5e-05  Score=64.75  Aligned_cols=96  Identities=14%  Similarity=0.095  Sum_probs=67.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|+||..++..+...| ..|+.+++++++++...+ +..   +|.++.+..+.+.+.. . -.++|++|+|+|.. 
T Consensus       146 V~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~-~Ga~~~~~~~~~~~~~~~~~~~-~-~~g~Dvvid~~g~~-  220 (325)
T 3jyn_A          146 FHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKA-LGAWETIDYSHEDVAKRVLELT-D-GKKCPVVYDGVGQD-  220 (325)
T ss_dssp             ESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHHHHHHHHT-T-TCCEEEEEESSCGG-
T ss_pred             EEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-cCCCEEEeCCCccHHHHHHHHh-C-CCCceEEEECCChH-
Confidence            68999999999999888885 589999998887775543 321   5666655444443322 1 12799999999951 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                                               ..+..++.++++|+++.++...+.
T Consensus       221 -------------------------~~~~~~~~l~~~G~iv~~g~~~~~  244 (325)
T 3jyn_A          221 -------------------------TWLTSLDSVAPRGLVVSFGNASGP  244 (325)
T ss_dssp             -------------------------GHHHHHTTEEEEEEEEECCCTTCC
T ss_pred             -------------------------HHHHHHHHhcCCCEEEEEecCCCC
Confidence                                     223445677889999999876653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.81  E-value=2.6e-05  Score=66.39  Aligned_cols=93  Identities=22%  Similarity=0.206  Sum_probs=63.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++||||.++++.+...| ..|+.+++++++++.. .++..   +|.++++..+.+.+.. . ..++|++|+|+|.. 
T Consensus       176 V~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~-~~~ga~~~~d~~~~~~~~~~~~~~-~-~~~~D~vi~~~G~~-  250 (351)
T 1yb5_A          176 VHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIV-LQNGAHEVFNHREVNYIDKIKKYV-G-EKGIDIIIEMLANV-  250 (351)
T ss_dssp             EETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHH-HHTTCSEEEETTSTTHHHHHHHHH-C-TTCEEEEEESCHHH-
T ss_pred             EECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHH-HHcCCCEEEeCCCchHHHHHHHHc-C-CCCcEEEEECCChH-
Confidence            68999999999999888885 5888999988877643 33321   5676655444443322 1 12799999999841 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                .               .+..+..+++.|+++.++..
T Consensus       251 ----------~---------------~~~~~~~l~~~G~iv~~g~~  271 (351)
T 1yb5_A          251 ----------N---------------LSKDLSLLSHGGRVIVVGSR  271 (351)
T ss_dssp             ----------H---------------HHHHHHHEEEEEEEEECCCC
T ss_pred             ----------H---------------HHHHHHhccCCCEEEEEecC
Confidence                      0               12233455788999998854

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.80  E-value=3.5e-05  Score=65.31  Aligned_cols=95  Identities=16%  Similarity=0.144  Sum_probs=65.6

Q ss_pred             CCCCCCcHHHHHHHHHHHh-cCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |||++||||..++..+... |. .|+.+++++++++... ++..   +|.++.+..+.+ .++... +++|++|+|+|..
T Consensus       176 V~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~-~~~~~~-~~~d~vi~~~g~~  251 (347)
T 1jvb_A          176 VVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAK-RAGADYVINASMQDPLAEI-RRITES-KGVDAVIDLNNSE  251 (347)
T ss_dssp             EETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHH-HHTCSEEEETTTSCHHHHH-HHHTTT-SCEEEEEESCCCH
T ss_pred             EECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHH-HhCCCEEecCCCccHHHHH-HHHhcC-CCceEEEECCCCH
Confidence            6899999999999988887 65 7888888887776553 2321   566664443333 222221 4899999999952


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               ...+..++.++++|+++.++...
T Consensus       252 -------------------------~~~~~~~~~l~~~G~iv~~g~~~  274 (347)
T 1jvb_A          252 -------------------------KTLSVYPKALAKQGKYVMVGLFG  274 (347)
T ss_dssp             -------------------------HHHTTGGGGEEEEEEEEECCSSC
T ss_pred             -------------------------HHHHHHHHHHhcCCEEEEECCCC
Confidence                                     12345566778889999988654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.76  E-value=0.00015  Score=61.48  Aligned_cols=95  Identities=9%  Similarity=0.021  Sum_probs=65.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|+||..++..+...| ..|+.+++++++++...+ +..   +|..+++-.+.+.+....  .++|++|+|+|.. 
T Consensus       170 i~gg~g~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~-~Ga~~~~~~~~~~~~~~v~~~~~~--~g~D~vid~~g~~-  244 (349)
T 3pi7_A          170 MTAGASQLCKLIIGLAKEEG-FRPIVTVRRDEQIALLKD-IGAAHVLNEKAPDFEATLREVMKA--EQPRIFLDAVTGP-  244 (349)
T ss_dssp             ESSTTSHHHHHHHHHHHHHT-CEEEEEESCGGGHHHHHH-HTCSEEEETTSTTHHHHHHHHHHH--HCCCEEEESSCHH-
T ss_pred             EeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-cCCCEEEECCcHHHHHHHHHHhcC--CCCcEEEECCCCh-
Confidence            58999999999998887775 589999998888776543 321   455554443333332221  2799999999852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               .++.+++.++++|+++.+++..+
T Consensus       245 -------------------------~~~~~~~~l~~~G~iv~~G~~~~  267 (349)
T 3pi7_A          245 -------------------------LASAIFNAMPKRARWIIYGRLDP  267 (349)
T ss_dssp             -------------------------HHHHHHHHSCTTCEEEECCCSCC
T ss_pred             -------------------------hHHHHHhhhcCCCEEEEEeccCC
Confidence                                     01234456788999999986554

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.75  E-value=2.8e-05  Score=68.52  Aligned_cols=67  Identities=13%  Similarity=0.118  Sum_probs=53.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+| +|++|+++++.|++.| ..|++.+|+.++++...+.+.     .+|++|.+++.++++       ++|+||||++.
T Consensus         8 ViG-aG~iG~~ia~~L~~~G-~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-------~~DvVIn~a~~   78 (450)
T 1ff9_A            8 MLG-SGFVTRPTLDVLTDSG-IKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA-------KHDLVISLIPY   78 (450)
T ss_dssp             EEC-CSTTHHHHHHHHHTTT-CEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT-------TSSEEEECCC-
T ss_pred             EEC-CCHHHHHHHHHHHhCc-CEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc-------CCcEEEECCcc
Confidence            576 8999999999999985 678999999887776655432     269999988877764       79999999987


Q ss_pred             c
Q psy7994          76 A   76 (230)
Q Consensus        76 ~   76 (230)
                      .
T Consensus        79 ~   79 (450)
T 1ff9_A           79 T   79 (450)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.74  E-value=5.5e-05  Score=64.02  Aligned_cols=95  Identities=18%  Similarity=0.175  Sum_probs=65.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|++|..++..+...| ..|+.+++++++++...+ +..   +|.++++-.+ .+.++.. ..++|++|+++| ..
T Consensus       172 V~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~-~ga~~~~d~~~~~~~~-~~~~~~~-~~~~d~vi~~~g-~~  246 (343)
T 2eih_A          172 VMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKA-LGADETVNYTHPDWPK-EVRRLTG-GKGADKVVDHTG-AL  246 (343)
T ss_dssp             ECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHH-HTCSEEEETTSTTHHH-HHHHHTT-TTCEEEEEESSC-SS
T ss_pred             EECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHh-cCCCEEEcCCcccHHH-HHHHHhC-CCCceEEEECCC-HH
Confidence            68999999999999888885 488889998887765543 221   5666654322 2333221 137999999999 31


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               ..+..++.++++|+++.+++..+
T Consensus       247 -------------------------~~~~~~~~l~~~G~~v~~g~~~~  269 (343)
T 2eih_A          247 -------------------------YFEGVIKATANGGRIAIAGASSG  269 (343)
T ss_dssp             -------------------------SHHHHHHHEEEEEEEEESSCCCS
T ss_pred             -------------------------HHHHHHHhhccCCEEEEEecCCC
Confidence                                     12344556688899999987654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.74  E-value=4.9e-05  Score=64.07  Aligned_cols=95  Identities=15%  Similarity=0.199  Sum_probs=64.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|+||..++..+...| ..|+.+++++++++.. .++..   +|.++++..+.+.+.. . -.++|++|+|+|.. 
T Consensus       154 V~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~-~~~ga~~~~~~~~~~~~~~~~~~~-~-~~g~D~vid~~g~~-  228 (334)
T 3qwb_A          154 LFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIA-KEYGAEYLINASKEDILRQVLKFT-N-GKGVDASFDSVGKD-  228 (334)
T ss_dssp             ESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHH-HHTTCSEEEETTTSCHHHHHHHHT-T-TSCEEEEEECCGGG-
T ss_pred             EECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHH-HHcCCcEEEeCCCchHHHHHHHHh-C-CCCceEEEECCChH-
Confidence            68999999999998888774 5889999988877744 33332   4555544444333322 1 12699999999851 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               ..+..++.++++|+++.++...+
T Consensus       229 -------------------------~~~~~~~~l~~~G~iv~~G~~~~  251 (334)
T 3qwb_A          229 -------------------------TFEISLAALKRKGVFVSFGNASG  251 (334)
T ss_dssp             -------------------------GHHHHHHHEEEEEEEEECCCTTC
T ss_pred             -------------------------HHHHHHHHhccCCEEEEEcCCCC
Confidence                                     12344556688899999987654

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.74  E-value=3.9e-05  Score=64.36  Aligned_cols=107  Identities=12%  Similarity=0.093  Sum_probs=69.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEec--CcchhHHHHHhhhc--------ccCCCHH-HHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTAR--DASRGQEALEKLQK--------LDILDKN-SIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r--~~~~~~~~~~~~~~--------~D~s~~~-~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+|.+|..++..|+.++. ..+.+.++  +.++++.....+..        +++++.+ ++.+       .+...|+
T Consensus         5 V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~-------al~gaD~   77 (313)
T 1hye_A            5 IIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR-------IIDESDV   77 (313)
T ss_dssp             EETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG-------GGTTCSE
T ss_pred             EECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHH-------HhCCCCE
Confidence            699999999999999998754 35888888  65544433332221        2333211 1122       2348999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      |||+||.....   ..   .-...+..|+.....+++++...-  ++.|+++|.
T Consensus        78 Vi~~Ag~~~~~---g~---~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SN  123 (313)
T 1hye_A           78 VIITSGVPRKE---GM---SRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITN  123 (313)
T ss_dssp             EEECCSCCCCT---TC---CHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSS
T ss_pred             EEECCCCCCCC---CC---cHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecC
Confidence            99999975311   11   234568999999999999987644  455555553

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.72  E-value=5.4e-05  Score=67.01  Aligned_cols=68  Identities=15%  Similarity=0.195  Sum_probs=55.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh--h--hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK--L--QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~--~--~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ ||+|++++..|++.++..|.+.+|+.++++...+.  +  ..+|+++.+++.++++       ++|+|||+++..
T Consensus        28 IiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           28 LLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-------DNDVVISLIPYT   99 (467)
T ss_dssp             EECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-------TSSEEEECSCGG
T ss_pred             EECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-------CCCEEEECCchh
Confidence            5786 99999999999998667899999999888776654  1  1379999888777664       699999999874

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.67  E-value=6.3e-05  Score=61.76  Aligned_cols=66  Identities=21%  Similarity=0.368  Sum_probs=50.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ ||+|++++..|++.| ..|++.+|+.++++...+.+..   +++.+.+++       .+  +++|+||||+|...
T Consensus       124 ViGa-Gg~g~a~a~~L~~~G-~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~-------~~--~~~DivVn~t~~~~  192 (271)
T 1nyt_A          124 LIGA-GGASRGVLLPLLSLD-CAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-------EG--HEFDLIINATSSGI  192 (271)
T ss_dssp             EECC-SHHHHHHHHHHHHTT-CEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-------TT--CCCSEEEECCSCGG
T ss_pred             EECC-cHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHhhccCCeeEecHHHh-------cc--CCCCEEEECCCCCC
Confidence            5787 799999999999996 7899999999888887766542   344443322       11  58999999999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.62  E-value=0.00011  Score=61.95  Aligned_cols=95  Identities=17%  Similarity=0.138  Sum_probs=63.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++++||..++..+...| ..|+.+++++++++...+ +..   +|.++.+..+.+.+ +.. ..++|++|+|+|...
T Consensus       150 V~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~-lga~~~~~~~~~~~~~~~~~-~~~-~~g~Dvvid~~g~~~  225 (340)
T 3gms_A          150 VNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLR-LGAAYVIDTSTAPLYETVME-LTN-GIGADAAIDSIGGPD  225 (340)
T ss_dssp             ESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHH-HTCSEEEETTTSCHHHHHHH-HTT-TSCEEEEEESSCHHH
T ss_pred             EeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHh-CCCcEEEeCCcccHHHHHHH-HhC-CCCCcEEEECCCChh
Confidence            68999999999998877774 589999998888776544 221   45555444333333 211 127999999999620


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                                +...+..++++|+++.++...+
T Consensus       226 --------------------------~~~~~~~l~~~G~iv~~G~~~~  247 (340)
T 3gms_A          226 --------------------------GNELAFSLRPNGHFLTIGLLSG  247 (340)
T ss_dssp             --------------------------HHHHHHTEEEEEEEEECCCTTS
T ss_pred             --------------------------HHHHHHHhcCCCEEEEEeecCC
Confidence                                      0111245688899999987654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.61  E-value=0.00012  Score=64.11  Aligned_cols=97  Identities=19%  Similarity=0.224  Sum_probs=65.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCC--------------CHHHHHHHHHHHHhhc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDIL--------------DKNSIKALHDHLEAEH   63 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s--------------~~~~v~~~~~~~~~~~   63 (230)
                      |+|++|+||..++..+... +..|+.+.+++++++... ++..   +|..              +.++++.+.+++.+..
T Consensus       226 V~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  303 (447)
T 4a0s_A          226 IWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA  303 (447)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH-HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH-hcCCCEEEecccccccccccccccccchhhhHHHHHHHHHh
Confidence            6899999999988877777 557777778887776553 3321   2211              1234445556665554


Q ss_pred             C-CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          64 G-GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        64 ~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      + ++|++|+++|..                          ..+..++.++++|+||.+++..+
T Consensus       304 g~g~Dvvid~~G~~--------------------------~~~~~~~~l~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          304 GREPDIVFEHTGRV--------------------------TFGLSVIVARRGGTVVTCGSSSG  340 (447)
T ss_dssp             SSCCSEEEECSCHH--------------------------HHHHHHHHSCTTCEEEESCCTTC
T ss_pred             CCCceEEEECCCch--------------------------HHHHHHHHHhcCCEEEEEecCCC
Confidence            5 699999999941                          11344556788999999988765

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.44  E-value=0.0002  Score=61.05  Aligned_cols=94  Identities=18%  Similarity=0.168  Sum_probs=63.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|++|..++..+...| ..|+.+++++++++...+ +..   +|.++.+ +.+.+.++.  -.++|++|+|+|.. 
T Consensus       169 V~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~-~Ga~~~~~~~~~~-~~~~~~~~~--~~g~D~vid~~g~~-  242 (362)
T 2c0c_A          169 VTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEY--PEGVDVVYESVGGA-  242 (362)
T ss_dssp             ETTTTBTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHH-TTCSEEEETTTSC-HHHHHHHHC--TTCEEEEEECSCTH-
T ss_pred             EeCCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHH-cCCcEEEecCChh-HHHHHHHhc--CCCCCEEEECCCHH-
Confidence            68999999999999888884 489999998877765543 321   4554433 333333332  13799999999831 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               ..+.+++.++++|++|.+++..+
T Consensus       243 -------------------------~~~~~~~~l~~~G~iv~~g~~~~  265 (362)
T 2c0c_A          243 -------------------------MFDLAVDALATKGRLIVIGFISG  265 (362)
T ss_dssp             -------------------------HHHHHHHHEEEEEEEEECCCGGG
T ss_pred             -------------------------HHHHHHHHHhcCCEEEEEeCCCC
Confidence                                     12344556688899999987654

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.43  E-value=0.00071  Score=57.00  Aligned_cols=105  Identities=14%  Similarity=0.139  Sum_probs=65.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcc----cCC---CHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKL----DIL---DKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~----D~s---~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|.+|..++..|+++|. ..|++.+++++  +....++..+    ++.   +..+.++.+       ...|+||++
T Consensus        13 ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al-------~gaDvVi~~   83 (326)
T 1smk_A           13 ILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAAL-------TGMDLIIVP   83 (326)
T ss_dssp             EETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHH-------TTCSEEEEC
T ss_pred             EECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHc-------CCCCEEEEc
Confidence            689999999999999998742 57888887765  2223333322    121   122333332       479999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      +|.....   ..+   -...+..|+.+...+++.+.+.- .++.|+++|
T Consensus        84 ag~~~~~---g~~---r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           84 AGVPRKP---GMT---RDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             CCCCCCS---SCC---CSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             CCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            9975321   111   22457888888888888776532 344555544

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.42  E-value=0.00028  Score=59.64  Aligned_cols=94  Identities=19%  Similarity=0.173  Sum_probs=58.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|+||..++..+...| ..|+.+++++++++...+ +..   +|..  +++.+.+.++.. ..++|++|+|+|.. 
T Consensus       165 V~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~-~ga~~v~~~~--~~~~~~v~~~~~-~~g~Dvvid~~g~~-  238 (342)
T 4eye_A          165 VLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKS-VGADIVLPLE--EGWAKAVREATG-GAGVDMVVDPIGGP-  238 (342)
T ss_dssp             ESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHH-HTCSEEEESS--TTHHHHHHHHTT-TSCEEEEEESCC---
T ss_pred             EECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHh-cCCcEEecCc--hhHHHHHHHHhC-CCCceEEEECCchh-
Confidence            68999999999998888774 588999998887765443 321   3444  333333333221 12699999999952 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                             .                  .+..+..++++|+++.++...+
T Consensus       239 -------~------------------~~~~~~~l~~~G~iv~~G~~~~  261 (342)
T 4eye_A          239 -------A------------------FDDAVRTLASEGRLLVVGFAAG  261 (342)
T ss_dssp             -------C------------------HHHHHHTEEEEEEEEEC-----
T ss_pred             -------H------------------HHHHHHhhcCCCEEEEEEccCC
Confidence                   0                  2234456688899999876543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.40  E-value=0.00029  Score=59.46  Aligned_cols=93  Identities=18%  Similarity=0.127  Sum_probs=64.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|..++..+...| ..|+.+++++++++...+ +..   +|.++.+ +.+.+.++.   +++|++|+++|.. 
T Consensus       170 V~Ga-G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~-lGa~~~~d~~~~~-~~~~~~~~~---~~~d~vid~~g~~-  241 (339)
T 1rjw_A          170 IYGI-GGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKE-LGADLVVNPLKED-AAKFMKEKV---GGVHAAVVTAVSK-  241 (339)
T ss_dssp             EECC-STTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHH-TTCSEEECTTTSC-HHHHHHHHH---SSEEEEEESSCCH-
T ss_pred             EECC-CHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH-CCCCEEecCCCcc-HHHHHHHHh---CCCCEEEECCCCH-
Confidence            5788 889999998887775 589999998887775533 321   5666543 333333332   5899999999852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                               +               .++..++.++++|+++.+++..+
T Consensus       242 ---------~---------------~~~~~~~~l~~~G~~v~~g~~~~  265 (339)
T 1rjw_A          242 ---------P---------------AFQSAYNSIRRGGACVLVGLPPE  265 (339)
T ss_dssp             ---------H---------------HHHHHHHHEEEEEEEEECCCCSS
T ss_pred             ---------H---------------HHHHHHHHhhcCCEEEEecccCC
Confidence                     0               23445556788899999987654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.40  E-value=0.00041  Score=58.19  Aligned_cols=68  Identities=18%  Similarity=0.234  Sum_probs=50.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC---cchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD---ASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~---~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      |+|+ ||+|++++..|++.|...|++.+|+   .++.++..+++..        .++.+.+++.+.+.       ..|+|
T Consensus       159 VlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-------~aDiI  230 (315)
T 3tnl_A          159 ICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-------ESVIF  230 (315)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-------TCSEE
T ss_pred             EECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-------CCCEE
Confidence            5676 7999999999999977799999999   7777777666543        34555555544433       68999


Q ss_pred             EEccCCc
Q psy7994          70 VNNAAIA   76 (230)
Q Consensus        70 v~~ag~~   76 (230)
                      ||+....
T Consensus       231 INaTp~G  237 (315)
T 3tnl_A          231 TNATGVG  237 (315)
T ss_dssp             EECSSTT
T ss_pred             EECccCC
Confidence            9998764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.38  E-value=0.00025  Score=59.17  Aligned_cols=111  Identities=13%  Similarity=0.025  Sum_probs=67.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEec--CcchhHHHHHhhhcccC-CCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTAR--DASRGQEALEKLQKLDI-LDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r--~~~~~~~~~~~~~~~D~-s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+|.+|..++..|+.++.. .+.+.++  ++++++....++..+.. ...-.+..  .. .+.+...|+||+++|..
T Consensus         5 IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~--~~-~~a~~~aDvVi~~ag~~   81 (303)
T 1o6z_A            5 VVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ--GG-YEDTAGSDVVVITAGIP   81 (303)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE--CC-GGGGTTCSEEEECCCCC
T ss_pred             EECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe--CC-HHHhCCCCEEEEcCCCC
Confidence            6899999999999999987543 5888888  66555443333322100 00000000  00 12245799999999975


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      ...   ..+   -...+..|+.....+++.+... ..++.|+++|
T Consensus        82 ~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~S  119 (303)
T 1o6z_A           82 RQP---GQT---RIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTS  119 (303)
T ss_dssp             CCT---TCC---HHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECC
T ss_pred             CCC---CCC---HHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeC
Confidence            311   112   2356899999999999988654 3345555554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.37  E-value=0.00042  Score=59.22  Aligned_cols=97  Identities=15%  Similarity=0.098  Sum_probs=64.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|++++..+...|. .|++.+|++++++...+....   .+..+.+++.+.+.       ..|++|++++...
T Consensus       172 ViGa-GgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~DvVI~~~~~~~  242 (361)
T 1pjc_A          172 ILGG-GVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA-------EADLLIGAVLVPG  242 (361)
T ss_dssp             EECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH-------TCSEEEECCCCTT
T ss_pred             EECC-CHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHc-------CCCEEEECCCcCC
Confidence            5677 9999999999999966 899999999888776554322   12234444443332       6999999998742


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      ..     .              +..+.+..++.|++++.|+.+++..+
T Consensus       243 ~~-----~--------------~~li~~~~~~~~~~g~~ivdv~~~~g  271 (361)
T 1pjc_A          243 RR-----A--------------PILVPASLVEQMRTGSVIVDVAVDQG  271 (361)
T ss_dssp             SS-----C--------------CCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred             CC-----C--------------CeecCHHHHhhCCCCCEEEEEecCCC
Confidence            10     0              01112334456788899999987654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.35  E-value=0.00019  Score=61.27  Aligned_cols=91  Identities=15%  Similarity=0.129  Sum_probs=61.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc---chhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA---SRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~---~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+ |+||..++..+...|. .|+.+++++   ++++.. .++..  .| .+  ++.+.+.+ ..  +++|++|+++|.
T Consensus       186 V~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~-~~~ga~~v~-~~--~~~~~~~~-~~--~~~d~vid~~g~  256 (366)
T 2cdc_A          186 VVGT-GPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVI-EETKTNYYN-SS--NGYDKLKD-SV--GKFDVIIDATGA  256 (366)
T ss_dssp             EESC-HHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHH-HHHTCEEEE-CT--TCSHHHHH-HH--CCEEEEEECCCC
T ss_pred             EECC-CHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHH-HHhCCceec-hH--HHHHHHHH-hC--CCCCEEEECCCC
Confidence            6898 9999999998888855 898999887   666433 23321  23 33  22222222 22  589999999996


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHH-HHhcccccCCceEEEecCCCc
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVC-DILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~-~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      ..                         .+ +..++.|+++|+||+++...+
T Consensus       257 ~~-------------------------~~~~~~~~~l~~~G~iv~~g~~~~  282 (366)
T 2cdc_A          257 DV-------------------------NILGNVIPLLGRNGVLGLFGFSTS  282 (366)
T ss_dssp             CT-------------------------HHHHHHGGGEEEEEEEEECSCCCS
T ss_pred             hH-------------------------HHHHHHHHHHhcCCEEEEEecCCC
Confidence            31                         23 666778888899999987654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.27  E-value=0.00038  Score=59.86  Aligned_cols=96  Identities=9%  Similarity=0.062  Sum_probs=65.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |+||..+++.+...|. .|+..++++++++...+.+..   .+.++.+++.+++.       ..|+||++++...
T Consensus       173 ViG~-G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-------~aDvVi~~~~~p~  243 (377)
T 2vhw_A          173 VIGA-GTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-------RADLVIGAVLVPG  243 (377)
T ss_dssp             EECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-------HCSEEEECCCCTT
T ss_pred             EECC-CHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-------CCCEEEECCCcCC
Confidence            5676 9999999999999855 899999998887765543321   23345555555443       5899999998642


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      .    . +              +..+.+..++.|++++.||++++..
T Consensus       244 ~----~-t--------------~~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          244 A----K-A--------------PKLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             S----C-C--------------CCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             C----C-C--------------cceecHHHHhcCCCCcEEEEEecCC
Confidence            1    0 0              0112345566788889999999643

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.27  E-value=0.00058  Score=56.55  Aligned_cols=88  Identities=18%  Similarity=0.175  Sum_probs=57.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|++|++|..++..+...| ..|+.+++++++++...+ +..   +|..+ .+    +.+++    +++|++|+ +|..
T Consensus       131 V~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~-~ga~~~~~~~~~~~----~~~~~----~~~d~vid-~g~~  199 (302)
T 1iz0_A          131 VQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLA-LGAEEAATYAEVPE----RAKAW----GGLDLVLE-VRGK  199 (302)
T ss_dssp             ESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHH-TTCSEEEEGGGHHH----HHHHT----TSEEEEEE-CSCT
T ss_pred             EECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHh-cCCCEEEECCcchh----HHHHh----cCceEEEE-CCHH
Confidence            68999999999998877775 589999998888776533 321   34443 22    22222    57999999 8741


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                              .                  .+..+..++++|+++.++...+
T Consensus       200 --------~------------------~~~~~~~l~~~G~~v~~g~~~~  222 (302)
T 1iz0_A          200 --------E------------------VEESLGLLAHGGRLVYIGAAEG  222 (302)
T ss_dssp             --------T------------------HHHHHTTEEEEEEEEEC-----
T ss_pred             --------H------------------HHHHHHhhccCCEEEEEeCCCC
Confidence                    0                  2445667788899999876544

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.24  E-value=0.00067  Score=49.51  Aligned_cols=66  Identities=17%  Similarity=0.245  Sum_probs=49.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |+|+ |.+|.++++.|.++ +..|++.+++++..+...+.-.   .+|.++++.++++      ...+.|++|.+.+
T Consensus        11 I~G~-G~iG~~la~~L~~~-g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~------~~~~~d~vi~~~~   79 (141)
T 3llv_A           11 VIGS-EAAGVGLVRELTAA-GKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSL------DLEGVSAVLITGS   79 (141)
T ss_dssp             EECC-SHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHS------CCTTCSEEEECCS
T ss_pred             EECC-CHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhC------CcccCCEEEEecC
Confidence            4666 77999999999999 5678888999887776654322   2799998877654      2347899998777

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.24  E-value=0.00045  Score=58.97  Aligned_cols=91  Identities=24%  Similarity=0.317  Sum_probs=62.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |+||..++..+...| ..|+.+++++++++...+++..   +|..+.+.+.+       ..+++|++|+++|...
T Consensus       193 V~Ga-G~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~-------~~~~~D~vid~~g~~~  263 (366)
T 1yqd_A          193 IVGL-GGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQA-------AAGTLDGIIDTVSAVH  263 (366)
T ss_dssp             EECC-SHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHH-------TTTCEEEEEECCSSCC
T ss_pred             EECC-CHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHH-------hhCCCCEEEECCCcHH
Confidence            5675 999999998777774 5888899988887766544432   46666543322       2357999999999631


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               .++..++.+++.|++|++++..+
T Consensus       264 -------------------------~~~~~~~~l~~~G~iv~~g~~~~  286 (366)
T 1yqd_A          264 -------------------------PLLPLFGLLKSHGKLILVGAPEK  286 (366)
T ss_dssp             -------------------------CSHHHHHHEEEEEEEEECCCCSS
T ss_pred             -------------------------HHHHHHHHHhcCCEEEEEccCCC
Confidence                                     11233455678899999987654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.22  E-value=0.00096  Score=58.63  Aligned_cols=98  Identities=13%  Similarity=0.197  Sum_probs=67.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccC-------------CCHHHHHHHHHHHHhhcC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDI-------------LDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~-------------s~~~~v~~~~~~~~~~~~   64 (230)
                      |+|++|++|...+..+... +..|+.+.+++++++.+.+ +..   +|.             ++.++.+.+.+++.+..+
T Consensus       234 V~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~-lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~  311 (456)
T 3krt_A          234 IWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRA-MGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTG  311 (456)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-HTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHT
T ss_pred             EECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHh-hCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhC
Confidence            6899999999888877666 5577777788777765533 321   222             345566667777766553


Q ss_pred             --CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc
Q psy7994          65 --GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        65 --~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                        ++|++|.++|..                          ..+..+..++++|+++.+++..+.
T Consensus       312 g~g~Dvvid~~G~~--------------------------~~~~~~~~l~~~G~iv~~G~~~~~  349 (456)
T 3krt_A          312 GEDIDIVFEHPGRE--------------------------TFGASVFVTRKGGTITTCASTSGY  349 (456)
T ss_dssp             SCCEEEEEECSCHH--------------------------HHHHHHHHEEEEEEEEESCCTTCS
T ss_pred             CCCCcEEEEcCCch--------------------------hHHHHHHHhhCCcEEEEEecCCCc
Confidence              799999999841                          123344566888999999876653

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.16  E-value=0.00084  Score=56.74  Aligned_cols=92  Identities=12%  Similarity=0.042  Sum_probs=61.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|++|...+..+...| ..|+.+++++++++...+ +..   +|..+  +..+.+.++  ..+.+|++|+|+|.. 
T Consensus       156 V~gg~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~--~~~~~~~~~--~~~g~Dvv~d~~g~~-  228 (346)
T 3fbg_A          156 IINGAGGVGSIATQIAKAYG-LRVITTASRNETIEWTKK-MGADIVLNHKE--SLLNQFKTQ--GIELVDYVFCTFNTD-  228 (346)
T ss_dssp             EESTTSHHHHHHHHHHHHTT-CEEEEECCSHHHHHHHHH-HTCSEEECTTS--CHHHHHHHH--TCCCEEEEEESSCHH-
T ss_pred             EEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHh-cCCcEEEECCc--cHHHHHHHh--CCCCccEEEECCCch-
Confidence            57999999999988777775 589999998887765544 321   34432  233333333  223799999999852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                              ...+..+..++++|++|.+++.
T Consensus       229 ------------------------~~~~~~~~~l~~~G~iv~~~~~  250 (346)
T 3fbg_A          229 ------------------------MYYDDMIQLVKPRGHIATIVAF  250 (346)
T ss_dssp             ------------------------HHHHHHHHHEEEEEEEEESSCC
T ss_pred             ------------------------HHHHHHHHHhccCCEEEEECCC
Confidence                                    1223445566888999888654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.11  E-value=0.00094  Score=56.45  Aligned_cols=96  Identities=16%  Similarity=0.145  Sum_probs=62.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|..++..+...|...|+.+++++++++... ++..   +|..+++ +.+.+.++.. -.++|++|+++|.. 
T Consensus       173 V~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~~-~~~~v~~~~~-g~g~D~vid~~g~~-  247 (348)
T 2d8a_A          173 ITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFEED-VVKEVMDITD-GNGVDVFLEFSGAP-  247 (348)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSEEECTTTSC-HHHHHHHHTT-TSCEEEEEECSCCH-
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCCCcC-HHHHHHHHcC-CCCCCEEEECCCCH-
Confidence            6788 999999998877775548888988887766543 2221   4555433 2222332221 12699999999851 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                              ..++..++.++++|+++.+++..+
T Consensus       248 ------------------------~~~~~~~~~l~~~G~iv~~g~~~~  271 (348)
T 2d8a_A          248 ------------------------KALEQGLQAVTPAGRVSLLGLYPG  271 (348)
T ss_dssp             ------------------------HHHHHHHHHEEEEEEEEECCCCSS
T ss_pred             ------------------------HHHHHHHHHHhcCCEEEEEccCCC
Confidence                                    123445566788899999987654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.11  E-value=0.00051  Score=56.73  Aligned_cols=68  Identities=21%  Similarity=0.295  Sum_probs=50.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |+|+ ||+|++++..|++.|...|++.+|+.++.+...+++..      +...+.+++.+.+.       ..|+|||+..
T Consensus       132 VlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~-------~~DiVInaTp  203 (283)
T 3jyo_A          132 QVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIA-------AADGVVNATP  203 (283)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHH-------HSSEEEECSS
T ss_pred             EECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHh-------cCCEEEECCC
Confidence            5676 89999999999999777899999999998887776653      12223334444443       4799999987


Q ss_pred             Cc
Q psy7994          75 IA   76 (230)
Q Consensus        75 ~~   76 (230)
                      ..
T Consensus       204 ~G  205 (283)
T 3jyo_A          204 MG  205 (283)
T ss_dssp             TT
T ss_pred             CC
Confidence            64

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.09  E-value=0.00028  Score=51.27  Aligned_cols=67  Identities=13%  Similarity=0.084  Sum_probs=47.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh---hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK---LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~---~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+ |++|..+++.|.+.| ..|+++++++++.+...+.   ....|.++++.++++      ...+.|++|++++.
T Consensus        11 I~G~-G~iG~~~a~~l~~~g-~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~------~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           11 VIGL-GRFGGSIVKELHRMG-HEVLAVDINEEKVNAYASYATHAVIANATEENELLSL------GIRNFEYVIVAIGA   80 (144)
T ss_dssp             EECC-SHHHHHHHHHHHHTT-CCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTT------TGGGCSEEEECCCS
T ss_pred             EECC-CHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhc------CCCCCCEEEECCCC
Confidence            5787 999999999999995 5677888887665543221   112687776655432      13479999999885

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.03  E-value=0.0018  Score=55.25  Aligned_cols=91  Identities=14%  Similarity=0.128  Sum_probs=59.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|++|..++..+...| ..|+.++ ++++.+.. +++..   +|.++.+-.+    ++.+ .+++|++|+++|...
T Consensus       189 V~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~-~~lGa~~v~~~~~~~~~~----~~~~-~~g~D~vid~~g~~~  260 (375)
T 2vn8_A          189 ILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELV-RKLGADDVIDYKSGSVEE----QLKS-LKPFDFILDNVGGST  260 (375)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHH-HHTTCSEEEETTSSCHHH----HHHT-SCCBSEEEESSCTTH
T ss_pred             EECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHH-HHcCCCEEEECCchHHHH----HHhh-cCCCCEEEECCCChh
Confidence            68999999999888777775 4777776 44555443 34322   4555543222    2222 257999999999521


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                              ...+..+..++++|+++.+++.
T Consensus       261 ------------------------~~~~~~~~~l~~~G~iv~~g~~  282 (375)
T 2vn8_A          261 ------------------------ETWAPDFLKKWSGATYVTLVTP  282 (375)
T ss_dssp             ------------------------HHHGGGGBCSSSCCEEEESCCS
T ss_pred             ------------------------hhhHHHHHhhcCCcEEEEeCCC
Confidence                                    1234456677889999998753

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.00  E-value=0.00077  Score=56.96  Aligned_cols=115  Identities=17%  Similarity=0.115  Sum_probs=68.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-e-----EEEEecCc--chhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-I-----IYLTARDA--SRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~-----vi~~~r~~--~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|.||.+++..|+..+.. .     |+++++++  ++++....++..+...-...+. ......+.+...|++|++
T Consensus         8 V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~-~~~~~~~~~~daDvVvit   86 (333)
T 5mdh_A            8 VTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI-ATDKEEIAFKDLDVAILV   86 (333)
T ss_dssp             ESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE-EESCHHHHTTTCSEEEEC
T ss_pred             EECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE-EcCCcHHHhCCCCEEEEe
Confidence            7999999999999999987543 3     88888864  3556555555543211000000 000112223479999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      ||.... +     .+.-.+.++.|+.....+++.+.+.-.+.-.++.+|.
T Consensus        87 Ag~prk-p-----G~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           87 GSMPRR-D-----GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             CSCCCC-T-----TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            997531 1     1223446777877777777766543222225776664

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.00  E-value=0.00052  Score=56.26  Aligned_cols=66  Identities=26%  Similarity=0.380  Sum_probs=47.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ ||+|++++..|++.| ..|++.+|+.++++...+.+..   ++..+.+++.       +  +..|+|||+++...
T Consensus       124 vlGa-Gg~g~a~a~~L~~~G-~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~-------~--~~~DivIn~t~~~~  192 (272)
T 1p77_A          124 ILGA-GGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP-------L--QTYDLVINATSAGL  192 (272)
T ss_dssp             EECC-SHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC-------C--SCCSEEEECCCC--
T ss_pred             EECC-cHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhc-------c--CCCCEEEECCCCCC
Confidence            5676 799999999999996 7999999999988887766542   2222221110       1  47999999999753

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.99  E-value=0.00079  Score=55.95  Aligned_cols=69  Identities=17%  Similarity=0.272  Sum_probs=50.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc--cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL--DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~--D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ ||+|++++..|++.|...|++.+|+.++++...+.+...  ++.+.++       +.+.....|+||++.+...
T Consensus       146 VlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~-------~~~~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          146 VIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAE-------AETRLAEYDIIINTTSVGM  216 (297)
T ss_dssp             EECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHH-------HHHTGGGCSEEEECSCTTC
T ss_pred             EECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHH-------HHhhhccCCEEEECCCCCC
Confidence            4565 799999999999997669999999999888887766421  2223322       2223357999999998753

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.98  E-value=0.0029  Score=52.96  Aligned_cols=108  Identities=17%  Similarity=0.093  Sum_probs=67.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcc----cCCC---HHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKL----DILD---KNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~----D~s~---~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|++|.+|..++..|+.++. ..|++.++++  .+....++..+    ++..   ..+.+..+       ...|++|++
T Consensus         5 IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~-------~~aDvVvi~   75 (314)
T 1mld_A            5 VLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCL-------KGCDVVVIP   75 (314)
T ss_dssp             EETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHH-------TTCSEEEEC
T ss_pred             EECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHh-------CCCCEEEEC
Confidence            689999999999999998742 6799999987  33344444432    2221   12333333       378999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      +|.....   ..+   -.+.+..|+.....+++.+.++- +++.||++|-..
T Consensus        76 ag~~~~~---g~~---r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv  120 (314)
T 1mld_A           76 AGVPRKP---GMT---RDDLFNTNATIVATLTAACAQHC-PDAMICIISNPV  120 (314)
T ss_dssp             CSCCCCT---TCC---GGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCH
T ss_pred             CCcCCCC---CCc---HHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCc
Confidence            9985321   111   12346677776666666665433 456777765433

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.97  E-value=0.003  Score=53.82  Aligned_cols=96  Identities=18%  Similarity=0.122  Sum_probs=64.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++... ++..   +|.++ .+++.+.+.++..  +++|++|+++|..
T Consensus       198 V~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~--~g~D~vid~~g~~  273 (374)
T 1cdo_A          198 VFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVNPNDHSEPISQVLSKMTN--GGVDFSLECVGNV  273 (374)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEECGGGCSSCHHHHHHHHHT--SCBSEEEECSCCH
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCceEEeccccchhHHHHHHHHhC--CCCCEEEECCCCH
Confidence            5674 899999888777775558989999888877554 3321   45543 1334444554443  4799999999862


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCCc
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSCG  125 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~~  125 (230)
                                               ..++..+..+++. |+++.++....
T Consensus       274 -------------------------~~~~~~~~~l~~~~G~iv~~G~~~~  298 (374)
T 1cdo_A          274 -------------------------GVMRNALESCLKGWGVSVLVGWTDL  298 (374)
T ss_dssp             -------------------------HHHHHHHHTBCTTTCEEEECSCCSS
T ss_pred             -------------------------HHHHHHHHHhhcCCcEEEEEcCCCC
Confidence                                     1234455667888 99999886543

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.95  E-value=0.001  Score=56.18  Aligned_cols=94  Identities=17%  Similarity=0.141  Sum_probs=61.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++...+ +..  +|..++ ++.+.+.++.  -.++|++|+++|..  
T Consensus       170 V~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-la~~v~~~~~~-~~~~~~~~~~--~~g~D~vid~~g~~--  242 (343)
T 2dq4_A          170 ITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-YADRLVNPLEE-DLLEVVRRVT--GSGVEVLLEFSGNE--  242 (343)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-TCSEEECTTTS-CHHHHHHHHH--SSCEEEEEECSCCH--
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hHHhccCcCcc-CHHHHHHHhc--CCCCCEEEECCCCH--
Confidence            5788 9999999887777754488888888776654432 211  455543 3333344433  24799999999851  


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                             ..++..++.+++.|+++.++...
T Consensus       243 -----------------------~~~~~~~~~l~~~G~iv~~g~~~  265 (343)
T 2dq4_A          243 -----------------------AAIHQGLMALIPGGEARILGIPS  265 (343)
T ss_dssp             -----------------------HHHHHHHHHEEEEEEEEECCCCS
T ss_pred             -----------------------HHHHHHHHHHhcCCEEEEEecCC
Confidence                                   11344455668889999988644

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.94  E-value=0.001  Score=55.65  Aligned_cols=93  Identities=19%  Similarity=0.094  Sum_probs=58.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|++|...+..+...| ..|+.+++++++++...+ +..   +|..+.+  ...+.++.  .+++|++|+++|.. 
T Consensus       155 V~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~--~~~~~~~~--~~~~d~vid~~g~~-  227 (328)
T 1xa0_A          155 VTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRV-LGAKEVLAREDVM--AERIRPLD--KQRWAAAVDPVGGR-  227 (328)
T ss_dssp             ESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHH-TTCSEEEECC-----------CC--SCCEEEEEECSTTT-
T ss_pred             EecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHH-cCCcEEEecCCcH--HHHHHHhc--CCcccEEEECCcHH-
Confidence            68999999999988777775 578888888877765533 321   4555432  22222221  13799999999852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                             .                  .+..+..++++|+++.++...+
T Consensus       228 -------~------------------~~~~~~~l~~~G~~v~~G~~~~  250 (328)
T 1xa0_A          228 -------T------------------LATVLSRMRYGGAVAVSGLTGG  250 (328)
T ss_dssp             -------T------------------HHHHHHTEEEEEEEEECSCCSS
T ss_pred             -------H------------------HHHHHHhhccCCEEEEEeecCC
Confidence                   0                  2334456678899998876543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.93  E-value=0.00097  Score=56.91  Aligned_cols=66  Identities=14%  Similarity=0.160  Sum_probs=52.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|+ |++|+.+++.|++.  ..|.+.+++.++++...+....  +|++|.+++.++++       +.|+||++++..
T Consensus        21 vlGa-G~vG~~~~~~L~~~--~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~-------~~DvVi~~~p~~   88 (365)
T 3abi_A           21 ILGA-GNIGRAIAWDLKDE--FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMK-------EFELVIGALPGF   88 (365)
T ss_dssp             EECC-SHHHHHHHHHHTTT--SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHT-------TCSEEEECCCGG
T ss_pred             EECC-CHHHHHHHHHHhcC--CCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHh-------CCCEEEEecCCc
Confidence            4577 99999999999874  6788899998888766544432  89999999888875       689999998863

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.86  E-value=0.002  Score=54.40  Aligned_cols=92  Identities=17%  Similarity=0.220  Sum_probs=59.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+||+|+||..++..+...|. .|+.+ +++++++... ++..  +| .+. +..+.+.++.. -.++|++|+|+|..  
T Consensus       156 V~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~-~lGa~~i~-~~~-~~~~~~~~~~~-~~g~D~vid~~g~~--  227 (343)
T 3gaz_A          156 IQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVR-DLGATPID-ASR-EPEDYAAEHTA-GQGFDLVYDTLGGP--  227 (343)
T ss_dssp             EETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHH-HHTSEEEE-TTS-CHHHHHHHHHT-TSCEEEEEESSCTH--
T ss_pred             EecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHH-HcCCCEec-cCC-CHHHHHHHHhc-CCCceEEEECCCcH--
Confidence            689999999999988877754 77777 7776665443 2221  45 333 33333333322 13799999999841  


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                              .++..+..+++.|+++.++...
T Consensus       228 ------------------------~~~~~~~~l~~~G~iv~~g~~~  249 (343)
T 3gaz_A          228 ------------------------VLDASFSAVKRFGHVVSCLGWG  249 (343)
T ss_dssp             ------------------------HHHHHHHHEEEEEEEEESCCCS
T ss_pred             ------------------------HHHHHHHHHhcCCeEEEEcccC
Confidence                                    1234445668889999887654

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.83  E-value=0.0051  Score=52.34  Aligned_cols=95  Identities=18%  Similarity=0.187  Sum_probs=62.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++... ++..   +|.++ .+++.+.+.++..  +++|++|.++|..
T Consensus       196 V~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~v~~~~~--~g~D~vid~~g~~  271 (373)
T 2fzw_A          196 VFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQDFSKPIQEVLIEMTD--GGVDYSFECIGNV  271 (373)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGGCSSCHHHHHHHHTT--SCBSEEEECSCCH
T ss_pred             EECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEeccccccccHHHHHHHHhC--CCCCEEEECCCcH
Confidence            5674 899999888777775558989998888876553 3321   44443 1334444444433  4799999999861


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSC  124 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~  124 (230)
                                               ...+..+..++++ |+++.++...
T Consensus       272 -------------------------~~~~~~~~~l~~~~G~iv~~G~~~  295 (373)
T 2fzw_A          272 -------------------------KVMRAALEACHKGWGVSVVVGVAA  295 (373)
T ss_dssp             -------------------------HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             -------------------------HHHHHHHHhhccCCcEEEEEecCC
Confidence                                     1134445567888 9999988654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.75  E-value=0.0031  Score=52.73  Aligned_cols=68  Identities=18%  Similarity=0.205  Sum_probs=48.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC---cchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD---ASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~---~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      |+|+ ||+|++++..|++.|...|.+.+|+   .++.++..+++..        .+..+.+...+.+.       ..|+|
T Consensus       153 VlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~-------~~DiI  224 (312)
T 3t4e_A          153 LLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA-------SADIL  224 (312)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-------HCSEE
T ss_pred             EECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-------CceEE
Confidence            4565 8999999999999977799999999   7777777666543        23333322222222       57999


Q ss_pred             EEccCCc
Q psy7994          70 VNNAAIA   76 (230)
Q Consensus        70 v~~ag~~   76 (230)
                      ||+....
T Consensus       225 INaTp~G  231 (312)
T 3t4e_A          225 TNGTKVG  231 (312)
T ss_dssp             EECSSTT
T ss_pred             EECCcCC
Confidence            9998765

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.74  E-value=0.003  Score=53.75  Aligned_cols=90  Identities=17%  Similarity=0.223  Sum_probs=58.9

Q ss_pred             CCCCCCcHHHHHHHHHHHh-cCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhc-CCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEH-GGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~-~~id~lv~~ag~   75 (230)
                      |+||+|++|...+. +++. ++..|+.+++++++++.+.+ +..   +|..+  ++.   +++.+.. +++|++|.++|.
T Consensus       177 V~Ga~G~vG~~a~q-lak~~~g~~Vi~~~~~~~~~~~~~~-lGad~vi~~~~--~~~---~~v~~~~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          177 IVGGAGGVGSIAVQ-IARQRTDLTVIATASRPETQEWVKS-LGAHHVIDHSK--PLA---AEVAALGLGAPAFVFSTTHT  249 (363)
T ss_dssp             EESTTSHHHHHHHH-HHHHHCCSEEEEECSSHHHHHHHHH-TTCSEEECTTS--CHH---HHHHTTCSCCEEEEEECSCH
T ss_pred             EECCCCHHHHHHHH-HHHHhcCCEEEEEeCCHHHHHHHHH-cCCCEEEeCCC--CHH---HHHHHhcCCCceEEEECCCc
Confidence            57899999987766 5554 67899999998887765533 322   34443  222   3333322 379999999985


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      .                         ...+.++..++++|+++.++.
T Consensus       250 ~-------------------------~~~~~~~~~l~~~G~iv~~g~  271 (363)
T 4dvj_A          250 D-------------------------KHAAEIADLIAPQGRFCLIDD  271 (363)
T ss_dssp             H-------------------------HHHHHHHHHSCTTCEEEECSC
T ss_pred             h-------------------------hhHHHHHHHhcCCCEEEEECC
Confidence            2                         123344556688899998854

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.71  E-value=0.0053  Score=52.29  Aligned_cols=95  Identities=19%  Similarity=0.193  Sum_probs=62.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+| +|++|...+..+...|...|+.+++++++++.+. ++..   +|.++ .+++.+.+.++..  +++|++|.++|..
T Consensus       197 V~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~--~g~D~vid~~g~~  272 (374)
T 2jhf_A          197 VFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECVNPQDYKKPIQEVLTEMSN--GGVDFSFEVIGRL  272 (374)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHHHHHHHTT--SCBSEEEECSCCH
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCceEecccccchhHHHHHHHHhC--CCCcEEEECCCCH
Confidence            567 5899999888777775558989999888877553 3321   45443 1234444444433  4799999999862


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSC  124 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~  124 (230)
                                               ...+..+..+++. |+++.++...
T Consensus       273 -------------------------~~~~~~~~~l~~~~G~iv~~G~~~  296 (374)
T 2jhf_A          273 -------------------------DTMVTALSCCQEAYGVSVIVGVPP  296 (374)
T ss_dssp             -------------------------HHHHHHHHHBCTTTCEEEECSCCC
T ss_pred             -------------------------HHHHHHHHHhhcCCcEEEEeccCC
Confidence                                     1123445566888 9999987544

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.65  E-value=0.01  Score=50.20  Aligned_cols=98  Identities=13%  Similarity=-0.007  Sum_probs=62.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-cc----CCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-LD----ILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-~D----~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+ |++|...+......|...|+.+++++++++...+.... .|    -.+.+++.+.+.++.. -.++|++|.++|.
T Consensus       185 V~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g~Dvvid~~g~  262 (363)
T 3m6i_A          185 ICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFG-GIEPAVALECTGV  262 (363)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTS-SCCCSEEEECSCC
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhC-CCCCCEEEECCCC
Confidence            5677 99999988766667555588898888887765543111 12    2234444433333321 1279999999986


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      .                         ...+..++.++++|+++.++...+
T Consensus       263 ~-------------------------~~~~~~~~~l~~~G~iv~~G~~~~  287 (363)
T 3m6i_A          263 E-------------------------SSIAAAIWAVKFGGKVFVIGVGKN  287 (363)
T ss_dssp             H-------------------------HHHHHHHHHSCTTCEEEECCCCCS
T ss_pred             h-------------------------HHHHHHHHHhcCCCEEEEEccCCC
Confidence            2                         113344556688999999876544

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.65  E-value=0.0075  Score=51.40  Aligned_cols=93  Identities=19%  Similarity=0.179  Sum_probs=61.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++.+. ++..   +|.++ .+++.+.+.++..  +.+|++|.++|..
T Consensus       201 V~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~~~~~v~~~~~--~g~Dvvid~~G~~  276 (376)
T 1e3i_A          201 VFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPRELDKPVQDVITELTA--GGVDYSLDCAGTA  276 (376)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHHHHHHHHT--SCBSEEEESSCCH
T ss_pred             EECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCcEEEccccccchHHHHHHHHhC--CCccEEEECCCCH
Confidence            5674 899999888666665558999999888877553 3321   44443 1234444444433  4799999999861


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSS  122 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS  122 (230)
                                               ...+..+..+++. |+++.++.
T Consensus       277 -------------------------~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          277 -------------------------QTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             -------------------------HHHHHHHHTBCTTTCEEEECCC
T ss_pred             -------------------------HHHHHHHHHhhcCCCEEEEECC
Confidence                                     1134445667888 99999876

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.63  E-value=0.0044  Score=52.36  Aligned_cols=95  Identities=19%  Similarity=0.124  Sum_probs=59.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHh-hcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEA-EHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~-~~~~id~lv~~ag~   75 (230)
                      |+|+ |++|...+..+...| ..|+.+++++++++... ++..   +|.++ .+..+++.+...+ .-.++|++|+++|.
T Consensus       174 V~Ga-G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          174 VIGA-GPIGLVSVLAAKAYG-AFVVCTARSPRRLEVAK-NCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             EECC-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHH-HTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCC
T ss_pred             EECC-CHHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHH-HhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEECCCC
Confidence            5786 899999888766674 45888888887776553 2221   45554 3333333322210 01379999999985


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      ..                         ..+..++.+++.|+++.++..
T Consensus       251 ~~-------------------------~~~~~~~~l~~~G~iv~~G~~  273 (352)
T 1e3j_A          251 EK-------------------------CITIGINITRTGGTLMLVGMG  273 (352)
T ss_dssp             HH-------------------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             HH-------------------------HHHHHHHHHhcCCEEEEEecC
Confidence            20                         234445566888999998753

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.62  E-value=0.011  Score=50.04  Aligned_cols=94  Identities=19%  Similarity=0.095  Sum_probs=59.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCC--CHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDIL--DKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s--~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++... ++..   +|..  +.++..+.+.+...  .++|++|.++|.
T Consensus       177 V~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~~~~~~i~~~~~--~g~D~vid~~g~  252 (356)
T 1pl8_A          177 VCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQISKESPQEIARKVEGQLG--CKPEVTIECTGA  252 (356)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEECSSCCHHHHHHHHHHHHT--SCCSEEEECSCC
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCcccccchHHHHHHHHhC--CCCCEEEECCCC
Confidence            5675 899999887666665558999998887766543 3321   4554  22333322333222  479999999985


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      .          +               ..+..+..++++|+++.++..
T Consensus       253 ~----------~---------------~~~~~~~~l~~~G~iv~~G~~  275 (356)
T 1pl8_A          253 E----------A---------------SIQAGIYATRSGGTLVLVGLG  275 (356)
T ss_dssp             H----------H---------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             h----------H---------------HHHHHHHHhcCCCEEEEEecC
Confidence            2          0               123344566888999998753

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.60  E-value=0.0043  Score=52.74  Aligned_cols=94  Identities=15%  Similarity=0.120  Sum_probs=61.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+| +|++|...+..+... +..|+.+++++++++...+ +..   +| .+.+++.+.+.++... .++|++|.++|.. 
T Consensus       195 V~G-~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~-~~~~~~~~~v~~~~~g-~g~D~vid~~g~~-  268 (363)
T 3uog_A          195 VQG-TGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFA-LGADHGIN-RLEEDWVERVYALTGD-RGADHILEIAGGA-  268 (363)
T ss_dssp             EES-SBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH-HTCSEEEE-TTTSCHHHHHHHHHTT-CCEEEEEEETTSS-
T ss_pred             EEC-CCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHH-cCCCEEEc-CCcccHHHHHHHHhCC-CCceEEEECCChH-
Confidence            567 899999888777666 5588899988887766433 321   45 4433444444443321 2799999999931 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                             .                  .+..+..++++|+++.++...+
T Consensus       269 -------~------------------~~~~~~~l~~~G~iv~~G~~~~  291 (363)
T 3uog_A          269 -------G------------------LGQSLKAVAPDGRISVIGVLEG  291 (363)
T ss_dssp             -------C------------------HHHHHHHEEEEEEEEEECCCSS
T ss_pred             -------H------------------HHHHHHHhhcCCEEEEEecCCC
Confidence                   1                  2334456688999999987655

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.59  E-value=0.006  Score=52.05  Aligned_cols=95  Identities=19%  Similarity=0.203  Sum_probs=63.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++.+ .++..   +|..+ .+++.+.+.++..  +++|++|.++|..
T Consensus       199 V~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~~~i~~~~~--gg~D~vid~~g~~  274 (378)
T 3uko_A          199 IFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKFGVNEFVNPKDHDKPIQEVIVDLTD--GGVDYSFECIGNV  274 (378)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTTTCCEEECGGGCSSCHHHHHHHHTT--SCBSEEEECSCCH
T ss_pred             EECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCcEEEccccCchhHHHHHHHhcC--CCCCEEEECCCCH
Confidence            5677 99999988877777665899999998887744 33322   44442 2344444444433  3899999999962


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSC  124 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~  124 (230)
                                               ...+..+..++++ |+++.++...
T Consensus       275 -------------------------~~~~~~~~~l~~g~G~iv~~G~~~  298 (378)
T 3uko_A          275 -------------------------SVMRAALECCHKGWGTSVIVGVAA  298 (378)
T ss_dssp             -------------------------HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             -------------------------HHHHHHHHHhhccCCEEEEEcccC
Confidence                                     1234445567885 9999988644

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.57  E-value=0.003  Score=51.83  Aligned_cols=66  Identities=20%  Similarity=0.306  Sum_probs=48.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ ||+|++++..|++.|...|.+.+|+.++.++..+++..  +.+...+++.       .  ...|+|||+....
T Consensus       125 vlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~-------~--~~~DivInaTp~g  192 (272)
T 3pwz_A          125 LLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALE-------G--QSFDIVVNATSAS  192 (272)
T ss_dssp             EECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGT-------T--CCCSEEEECSSGG
T ss_pred             EECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhc-------c--cCCCEEEECCCCC
Confidence            4565 79999999999999767999999999998888877653  2222222221       1  4789999998764

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.57  E-value=0.0028  Score=54.11  Aligned_cols=97  Identities=22%  Similarity=0.216  Sum_probs=61.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHH-hhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLE-AEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~-~~~~~id~lv~~ag~~   76 (230)
                      |+|+ |++|...+..+...|...|+.+++++++.+... ++..   +|.++.+-.+.+ .+.. ...+++|++|.++|..
T Consensus       188 V~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~~~i-~~~~~~~~gg~Dvvid~~G~~  264 (370)
T 4ej6_A          188 ILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAGDVVEAI-AGPVGLVPGGVDVVIECAGVA  264 (370)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTSSCHHHHH-HSTTSSSTTCEEEEEECSCCH
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEECCCCcCHHHHH-HhhhhccCCCCCEEEECCCCH
Confidence            5676 899998887766675558888888887766433 3321   455554433322 2210 1124799999999852


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               ...+..+..++++|+++.++...+
T Consensus       265 -------------------------~~~~~~~~~l~~~G~vv~~G~~~~  288 (370)
T 4ej6_A          265 -------------------------ETVKQSTRLAKAGGTVVILGVLPQ  288 (370)
T ss_dssp             -------------------------HHHHHHHHHEEEEEEEEECSCCCT
T ss_pred             -------------------------HHHHHHHHHhccCCEEEEEeccCC
Confidence                                     123344556688899999876544

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.56  E-value=0.0082  Score=51.07  Aligned_cols=95  Identities=20%  Similarity=0.171  Sum_probs=62.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCH-HHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDK-NSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+| +|++|...+..+...|...|+.+++++++++... ++..   +|..+. +++.+.+.++..  +++|++|.++|..
T Consensus       197 V~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~~~~~i~~~t~--gg~Dvvid~~g~~  272 (373)
T 1p0f_A          197 VFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKDYDKPIYEVICEKTN--GGVDYAVECAGRI  272 (373)
T ss_dssp             EEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHHHHHHHTT--SCBSEEEECSCCH
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCcEEEecccccchHHHHHHHHhC--CCCCEEEECCCCH
Confidence            567 4899998888666675558989998888877553 3321   344431 234444444433  4799999999862


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC-ceEEEecCCC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH-GRVVNVSSSC  124 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-g~ii~~sS~~  124 (230)
                                               ...+..+..++++ |+++.++...
T Consensus       273 -------------------------~~~~~~~~~l~~~~G~iv~~G~~~  296 (373)
T 1p0f_A          273 -------------------------ETMMNALQSTYCGSGVTVVLGLAS  296 (373)
T ss_dssp             -------------------------HHHHHHHHTBCTTTCEEEECCCCC
T ss_pred             -------------------------HHHHHHHHHHhcCCCEEEEEccCC
Confidence                                     1234455667888 9999987644

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.49  E-value=0.0068  Score=51.32  Aligned_cols=108  Identities=13%  Similarity=0.042  Sum_probs=66.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccC-----CCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDI-----LDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~-----s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |+|++|.+|..++..++.+|. ..|++++++.++++....++..+..     .-..+..+.       +..-|++|.++|
T Consensus        13 ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~a-------l~dADvVvitaG   85 (343)
T 3fi9_A           13 IVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEA-------LTDAKYIVSSGG   85 (343)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHH-------HTTEEEEEECCC
T ss_pred             EECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHH-------hCCCCEEEEccC
Confidence            578899999999999999864 4799999998887776666654321     111122222       237899999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCce-EEEecC
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGR-VVNVSS  122 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~-ii~~sS  122 (230)
                      ....      +.+.-.+.+..|+.-...+.+.+.++- +++. |+++|.
T Consensus        86 ~p~k------pG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsN  127 (343)
T 3fi9_A           86 APRK------EGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFN  127 (343)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSS
T ss_pred             CCCC------CCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecC
Confidence            7421      112234456677666666666554432 3453 566653

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.46  E-value=0.005  Score=52.67  Aligned_cols=96  Identities=14%  Similarity=0.009  Sum_probs=60.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC--HHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD--KNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~--~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+| +|++|...+..+...|...|+.+++++++++.+. ++..   +|...  .+++.+.+.++... .++|++|+++|.
T Consensus       201 V~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~v~~~~~g-~g~Dvvid~~g~  277 (380)
T 1vj0_A          201 IQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRETSVEERRKAIMDITHG-RGADFILEATGD  277 (380)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTTSCHHHHHHHHHHHTTT-SCEEEEEECSSC
T ss_pred             EEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCCcEEEeccccCcchHHHHHHHHhCC-CCCcEEEECCCC
Confidence            578 8999999888666664368999999888776554 3321   34331  33333333333211 169999999985


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      ..                         .++..++.++++|+++.++...
T Consensus       278 ~~-------------------------~~~~~~~~l~~~G~iv~~G~~~  301 (380)
T 1vj0_A          278 SR-------------------------ALLEGSELLRRGGFYSVAGVAV  301 (380)
T ss_dssp             TT-------------------------HHHHHHHHEEEEEEEEECCCCS
T ss_pred             HH-------------------------HHHHHHHHHhcCCEEEEEecCC
Confidence            20                         1233445668889999988655

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.45  E-value=0.0056  Score=43.97  Aligned_cols=67  Identities=16%  Similarity=0.220  Sum_probs=47.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+ |.+|..+++.|.+. +..|++.+++++..+...+..    ...|.++++.+.+.      ...+.|++|.+.+.
T Consensus         9 IiG~-G~iG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~------~~~~~d~vi~~~~~   79 (140)
T 1lss_A            9 IAGI-GRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDA------GIEDADMYIAVTGK   79 (140)
T ss_dssp             EECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHT------TTTTCSEEEECCSC
T ss_pred             EECC-CHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHc------CcccCCEEEEeeCC
Confidence            4665 99999999999998 567888899887776655432    12577776654321      13478999999753

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.45  E-value=0.0058  Score=51.32  Aligned_cols=93  Identities=17%  Similarity=0.163  Sum_probs=62.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|...+..+... +..|+.+++++++++...+ +..   +|..+++..+.+.+    ..+++|++|.++|.. 
T Consensus       172 V~Ga-G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~~~~~----~~g~~d~vid~~g~~-  243 (340)
T 3s2e_A          172 ISGI-GGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARR-LGAEVAVNARDTDPAAWLQK----EIGGAHGVLVTAVSP-  243 (340)
T ss_dssp             EECC-STTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TTCSEEEETTTSCHHHHHHH----HHSSEEEEEESSCCH-
T ss_pred             EECC-CHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH-cCCCEEEeCCCcCHHHHHHH----hCCCCCEEEEeCCCH-
Confidence            4565 89999988766666 4589999998887775433 322   45555444433333    335899999998842 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                               +               .++..++.++++|+++.++...+
T Consensus       244 ---------~---------------~~~~~~~~l~~~G~iv~~G~~~~  267 (340)
T 3s2e_A          244 ---------K---------------AFSQAIGMVRRGGTIALNGLPPG  267 (340)
T ss_dssp             ---------H---------------HHHHHHHHEEEEEEEEECSCCSS
T ss_pred             ---------H---------------HHHHHHHHhccCCEEEEeCCCCC
Confidence                     1               23444556788899999876554

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.35  E-value=0.017  Score=48.85  Aligned_cols=98  Identities=10%  Similarity=-0.014  Sum_probs=56.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH---HHHHhhhc---ccCCCH--HHHHHHHHHHHh-hcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ---EALEKLQK---LDILDK--NSIKALHDHLEA-EHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~---~~~~~~~~---~D~s~~--~~v~~~~~~~~~-~~~~id~lv~   71 (230)
                      |+|++|++|...+...... +..++.+.++.++++   ..+.++..   +|..+.  +++.+.+.++.. .-+++|++|.
T Consensus       173 V~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid  251 (364)
T 1gu7_A          173 QNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALN  251 (364)
T ss_dssp             ESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEE
T ss_pred             ECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEE
Confidence            6899999999887766666 556777776655422   22233321   222210  122222333220 1247999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      ++|...                         +. ..+..++++|+++.++...+
T Consensus       252 ~~G~~~-------------------------~~-~~~~~l~~~G~~v~~g~~~~  279 (364)
T 1gu7_A          252 CVGGKS-------------------------ST-GIARKLNNNGLMLTYGGMSF  279 (364)
T ss_dssp             SSCHHH-------------------------HH-HHHHTSCTTCEEEECCCCSS
T ss_pred             CCCchh-------------------------HH-HHHHHhccCCEEEEecCCCC
Confidence            998520                         01 23456688999999886543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.33  E-value=0.014  Score=50.26  Aligned_cols=101  Identities=15%  Similarity=0.151  Sum_probs=60.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++.+. ++..   +|..+.+-.+.+ .++.. -.++|++|.++|...
T Consensus       219 V~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~i-~~~t~-g~g~D~vid~~g~~~  294 (404)
T 3ip1_A          219 ILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKENFVEAV-LDYTN-GLGAKLFLEATGVPQ  294 (404)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTTSCHHHHH-HHHTT-TCCCSEEEECSSCHH
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEEcCCCCCHHHHH-HHHhC-CCCCCEEEECCCCcH
Confidence            5687 899998887666675558998988887776543 3321   455544333332 22221 126999999999620


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                               ..+..           +.+.+...++++|+++.++...+
T Consensus       295 ---------~~~~~-----------~~~~l~~~~~~~G~iv~~G~~~~  322 (404)
T 3ip1_A          295 ---------LVWPQ-----------IEEVIWRARGINATVAIVARADA  322 (404)
T ss_dssp             ---------HHHHH-----------HHHHHHHCSCCCCEEEECSCCCS
T ss_pred             ---------HHHHH-----------HHHHHHhccCCCcEEEEeCCCCC
Confidence                     00111           11111123378899999987654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.32  E-value=0.0025  Score=52.49  Aligned_cols=65  Identities=23%  Similarity=0.367  Sum_probs=48.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ ||+|++++..|++.|...|.+.+|+.++.+...+.+..   +...+.+++.          ...|+|||+....
T Consensus       131 vlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~----------~~aDiIInaTp~g  198 (281)
T 3o8q_A          131 LIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK----------QSYDVIINSTSAS  198 (281)
T ss_dssp             EECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC----------SCEEEEEECSCCC
T ss_pred             EECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhc----------CCCCEEEEcCcCC
Confidence            4666 79999999999999767999999999998888777653   2222222211          3789999998764

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.29  E-value=0.0025  Score=53.12  Aligned_cols=91  Identities=19%  Similarity=0.072  Sum_probs=59.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|++|...+..+...| ..|+.+++++++.+...+ +..   +|..+.+.    +.++.  .+++|++|.++|.. 
T Consensus       152 V~Ga~G~vG~~aiqla~~~G-a~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~----~~~~~--~~~~d~v~d~~g~~-  222 (324)
T 3nx4_A          152 VTGASGGVGSTAVALLHKLG-YQVAAVSGRESTHGYLKS-LGANRILSRDEFAE----SRPLE--KQLWAGAIDTVGDK-  222 (324)
T ss_dssp             ESSTTSHHHHHHHHHHHHTT-CCEEEEESCGGGHHHHHH-HTCSEEEEGGGSSC----CCSSC--CCCEEEEEESSCHH-
T ss_pred             EECCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHh-cCCCEEEecCCHHH----HHhhc--CCCccEEEECCCcH-
Confidence            68999999998888777774 488888888887765543 321   33333222    11111  14789999888741 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               ..+..+..+++.|+++.++...+
T Consensus       223 -------------------------~~~~~~~~l~~~G~iv~~G~~~~  245 (324)
T 3nx4_A          223 -------------------------VLAKVLAQMNYGGCVAACGLAGG  245 (324)
T ss_dssp             -------------------------HHHHHHHTEEEEEEEEECCCTTC
T ss_pred             -------------------------HHHHHHHHHhcCCEEEEEecCCC
Confidence                                     23444556788899999987655

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.20  E-value=0.016  Score=48.68  Aligned_cols=95  Identities=17%  Similarity=0.141  Sum_probs=61.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|...+..+...|+..|+.+++++++++...+ +-.   +|..+ +..+. +.++... .++|++|.++|.. 
T Consensus       177 v~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-lGa~~~i~~~~-~~~~~-v~~~t~g-~g~d~v~d~~G~~-  250 (345)
T 3jv7_A          177 VIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-VGADAAVKSGA-GAADA-IRELTGG-QGATAVFDFVGAQ-  250 (345)
T ss_dssp             EECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-TTCSEEEECST-THHHH-HHHHHGG-GCEEEEEESSCCH-
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEEEcCCC-cHHHH-HHHHhCC-CCCeEEEECCCCH-
Confidence            4676 9999988776666667899999999887775533 321   34333 22222 2222211 2799999999962 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                              ..++..+..+++.|+++.++...+
T Consensus       251 ------------------------~~~~~~~~~l~~~G~iv~~G~~~~  274 (345)
T 3jv7_A          251 ------------------------STIDTAQQVVAVDGHISVVGIHAG  274 (345)
T ss_dssp             ------------------------HHHHHHHHHEEEEEEEEECSCCTT
T ss_pred             ------------------------HHHHHHHHHHhcCCEEEEECCCCC
Confidence                                    123444556688899999886554

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.20  E-value=0.0015  Score=47.89  Aligned_cols=66  Identities=17%  Similarity=0.183  Sum_probs=47.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.| +|++|..+++.|.+.|.. |++.+|++++.+...+++. .++...+++.+++.       ..|+||++.+..
T Consensus        26 iiG-~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~-~~~~~~~~~~~~~~-------~~Divi~at~~~   91 (144)
T 3oj0_A           26 LVG-NGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYE-YEYVLINDIDSLIK-------NNDVIITATSSK   91 (144)
T ss_dssp             EEC-CSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHT-CEEEECSCHHHHHH-------TCSEEEECSCCS
T ss_pred             EEC-CCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhC-CceEeecCHHHHhc-------CCCEEEEeCCCC
Confidence            346 599999999999998654 9999999998887766654 23322333444443       689999998864

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.19  E-value=0.0076  Score=51.36  Aligned_cols=90  Identities=17%  Similarity=0.187  Sum_probs=58.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|...+..+... +..|+.+++++++++...+ +..   +|..+++.++    ++.   +++|++|.++|...
T Consensus       200 V~Ga-G~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~----~~~---~g~Dvvid~~g~~~  269 (369)
T 1uuf_A          200 VVGI-GGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA-LGADEVVNSRNADEMA----AHL---KSFDFILNTVAAPH  269 (369)
T ss_dssp             EECC-SHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH-HTCSEEEETTCHHHHH----TTT---TCEEEEEECCSSCC
T ss_pred             EECC-CHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-cCCcEEeccccHHHHH----Hhh---cCCCEEEECCCCHH
Confidence            5676 88999988766666 4568888988888775543 322   4555554332    222   57999999998621


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               .++..++.++++|+++.++...+
T Consensus       270 -------------------------~~~~~~~~l~~~G~iv~~G~~~~  292 (369)
T 1uuf_A          270 -------------------------NLDDFTTLLKRDGTMTLVGAPAT  292 (369)
T ss_dssp             -------------------------CHHHHHTTEEEEEEEEECCCC--
T ss_pred             -------------------------HHHHHHHHhccCCEEEEeccCCC
Confidence                                     12334456678899998876543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.14  E-value=0.0051  Score=47.91  Aligned_cols=65  Identities=14%  Similarity=0.216  Sum_probs=43.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |+||+|.+|.++++.|++. +..|.+.+|++++.+...+.+..    .|+. ..+..++++       ..|+||++..
T Consensus         5 iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~D~Vi~~~~   73 (212)
T 1jay_A            5 LLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAE-------ACDIAVLTIP   73 (212)
T ss_dssp             EETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHH-------HCSEEEECSC
T ss_pred             EEcCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHh-------cCCEEEEeCC
Confidence            5788999999999999998 46888899988776655443220    2232 223333332       4678887765

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.12  E-value=0.0038  Score=52.94  Aligned_cols=93  Identities=17%  Similarity=0.231  Sum_probs=59.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|...+..+...| ..|+.+++++++++...+ +..   +|..++.+   +.+++.   +++|++|.++|...
T Consensus       185 V~Ga-G~vG~~~~qlak~~G-a~Vi~~~~~~~~~~~~~~-lGa~~v~~~~~~~~---~~~~~~---~~~D~vid~~g~~~  255 (360)
T 1piw_A          185 IVGL-GGIGSMGTLISKAMG-AETYVISRSSRKREDAMK-MGADHYIATLEEGD---WGEKYF---DTFDLIVVCASSLT  255 (360)
T ss_dssp             EECC-SHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHH-HTCSEEEEGGGTSC---HHHHSC---SCEEEEEECCSCST
T ss_pred             EECC-CHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHH-cCCCEEEcCcCchH---HHHHhh---cCCCEEEECCCCCc
Confidence            5788 999999888777774 479999998888776543 321   34443311   222222   58999999998620


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      +.                       ..+..++.++++|+++.++...+
T Consensus       256 ~~-----------------------~~~~~~~~l~~~G~iv~~g~~~~  280 (360)
T 1piw_A          256 DI-----------------------DFNIMPKAMKVGGRIVSISIPEQ  280 (360)
T ss_dssp             TC-----------------------CTTTGGGGEEEEEEEEECCCCCS
T ss_pred             HH-----------------------HHHHHHHHhcCCCEEEEecCCCC
Confidence            00                       01233456678889998876543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.12  E-value=0.0012  Score=55.28  Aligned_cols=94  Identities=16%  Similarity=0.124  Sum_probs=58.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhccc-CCCHHHH-HHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLD-ILDKNSI-KALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D-~s~~~~v-~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|++|++|...+..+...| ..|+.+++++++++...+ +. +| +-|..+. ...+.++.  .+++|++|+++|..  
T Consensus       156 V~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~-lG-a~~v~~~~~~~~~~~~~~~--~~~~d~vid~~g~~--  228 (330)
T 1tt7_A          156 VTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQ-LG-ASEVISREDVYDGTLKALS--KQQWQGAVDPVGGK--  228 (330)
T ss_dssp             EESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHH-HT-CSEEEEHHHHCSSCCCSSC--CCCEEEEEESCCTH--
T ss_pred             EECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-cC-CcEEEECCCchHHHHHHhh--cCCccEEEECCcHH--
Confidence            68999999999988777775 568888888877765533 32 12 1122111 01111111  13699999999841  


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                              ..+..+..++++|+++.++...+
T Consensus       229 ------------------------~~~~~~~~l~~~G~iv~~G~~~~  251 (330)
T 1tt7_A          229 ------------------------QLASLLSKIQYGGSVAVSGLTGG  251 (330)
T ss_dssp             ------------------------HHHHHHTTEEEEEEEEECCCSSC
T ss_pred             ------------------------HHHHHHHhhcCCCEEEEEecCCC
Confidence                                    12344556788899998876543

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.08  E-value=0.0058  Score=51.79  Aligned_cols=91  Identities=15%  Similarity=0.187  Sum_probs=60.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+| +|++|...+..+...| ..|+.+++++++++...+++..   +|..+.+.+.    +   ..+++|++|.++|...
T Consensus       186 V~G-aG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~----~---~~~g~D~vid~~g~~~  256 (357)
T 2cf5_A          186 ILG-LGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGADDYVIGSDQAKMS----E---LADSLDYVIDTVPVHH  256 (357)
T ss_dssp             EEC-CSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHH----H---STTTEEEEEECCCSCC
T ss_pred             EEC-CCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCCceeeccccHHHHH----H---hcCCCCEEEECCCChH
Confidence            567 4999999888776674 5888899988877766534432   4555543322    2   2247999999998631


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                             .                  ++..+..++++|+++.++...+
T Consensus       257 -------~------------------~~~~~~~l~~~G~iv~~G~~~~  279 (357)
T 2cf5_A          257 -------A------------------LEPYLSLLKLDGKLILMGVINN  279 (357)
T ss_dssp             -------C------------------SHHHHTTEEEEEEEEECSCCSS
T ss_pred             -------H------------------HHHHHHHhccCCEEEEeCCCCC
Confidence                   0                  1233446678899999886544

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.07  E-value=0.0077  Score=50.84  Aligned_cols=96  Identities=17%  Similarity=0.154  Sum_probs=59.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+| +|++|...+..+...|...|+.+++++++++...+ +..   +|..+.+-.+.+.+ +.. -.++|++|.++|.. 
T Consensus       172 V~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~v~~-~t~-g~g~D~v~d~~g~~-  246 (352)
T 3fpc_A          172 VIG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE-YGATDIINYKNGDIVEQILK-ATD-GKGVDKVVIAGGDV-  246 (352)
T ss_dssp             EEC-CSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH-HTCCEEECGGGSCHHHHHHH-HTT-TCCEEEEEECSSCT-
T ss_pred             EEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCceEEcCCCcCHHHHHHH-HcC-CCCCCEEEECCCCh-
Confidence            567 48999988876666655578888888877654433 321   45544433333322 211 12699999999862 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                              ...+..++.++++|+++.++...+
T Consensus       247 ------------------------~~~~~~~~~l~~~G~~v~~G~~~~  270 (352)
T 3fpc_A          247 ------------------------HTFAQAVKMIKPGSDIGNVNYLGE  270 (352)
T ss_dssp             ------------------------THHHHHHHHEEEEEEEEECCCCCS
T ss_pred             ------------------------HHHHHHHHHHhcCCEEEEecccCC
Confidence                                    023334556688899998876543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.03  E-value=0.0084  Score=50.44  Aligned_cols=95  Identities=20%  Similarity=0.188  Sum_probs=59.0

Q ss_pred             CCCCCCcHHHHHHHHHHHh--cCCeEEEEecCcchhHHHHHhhhccc-CCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ--FDGIIYLTARDASRGQEALEKLQKLD-ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~--g~~~vi~~~r~~~~~~~~~~~~~~~D-~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|...+..+...  |. .|+.+++++++++...+ +. +| +-+..+-...++++.+ -.++|++|.++|.. 
T Consensus       176 V~Ga-G~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~-lG-a~~vi~~~~~~~~~~~~~~-g~g~D~vid~~g~~-  249 (344)
T 2h6e_A          176 VNGI-GGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALE-LG-ADYVSEMKDAESLINKLTD-GLGASIAIDLVGTE-  249 (344)
T ss_dssp             EECC-SHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHH-HT-CSEEECHHHHHHHHHHHHT-TCCEEEEEESSCCH-
T ss_pred             EECC-CHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHH-hC-CCEEeccccchHHHHHhhc-CCCccEEEECCCCh-
Confidence            5788 89999888766665  54 68888888877765533 32 22 1122210123344433 12799999999852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                              ...+..++.++++|+++.++...+
T Consensus       250 ------------------------~~~~~~~~~l~~~G~iv~~g~~~~  273 (344)
T 2h6e_A          250 ------------------------ETTYNLGKLLAQEGAIILVGMEGK  273 (344)
T ss_dssp             ------------------------HHHHHHHHHEEEEEEEEECCCCSS
T ss_pred             ------------------------HHHHHHHHHhhcCCEEEEeCCCCC
Confidence                                    123444556688899999886543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.03  E-value=0.013  Score=49.71  Aligned_cols=94  Identities=16%  Similarity=0.169  Sum_probs=60.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+| +|++|...+..+...|...|+.+++++++++.+. ++..   +|..+.+-.+. +.++..  +++|++|.++|.. 
T Consensus       196 V~G-aG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~~~-~~~~~~--gg~D~vid~~g~~-  269 (371)
T 1f8f_A          196 TWG-AGAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKTQDPVAA-IKEITD--GGVNFALESTGSP-  269 (371)
T ss_dssp             EES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTTSCHHHH-HHHHTT--SCEEEEEECSCCH-
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCCEEecCCccCHHHH-HHHhcC--CCCcEEEECCCCH-
Confidence            567 5899998888766675557888888888776553 2221   44444332222 222222  3799999999851 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                              ...+..+..++++|+++.++...
T Consensus       270 ------------------------~~~~~~~~~l~~~G~iv~~G~~~  292 (371)
T 1f8f_A          270 ------------------------EILKQGVDALGILGKIAVVGAPQ  292 (371)
T ss_dssp             ------------------------HHHHHHHHTEEEEEEEEECCCCS
T ss_pred             ------------------------HHHHHHHHHHhcCCEEEEeCCCC
Confidence                                    12344456678889999987654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.96  E-value=0.03  Score=47.65  Aligned_cols=93  Identities=12%  Similarity=0.032  Sum_probs=57.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|++|...+......| ..|+.+. ++++++ .+.++..   +|..+++-.+ .+.++..  +++|++|.++|.. 
T Consensus       170 V~Ga~G~vG~~a~qla~~~G-a~Vi~~~-~~~~~~-~~~~lGa~~vi~~~~~~~~~-~v~~~t~--g~~d~v~d~~g~~-  242 (371)
T 3gqv_A          170 VYGGSTATATVTMQMLRLSG-YIPIATC-SPHNFD-LAKSRGAEEVFDYRAPNLAQ-TIRTYTK--NNLRYALDCITNV-  242 (371)
T ss_dssp             EESTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHH-HHHHTTCSEEEETTSTTHHH-HHHHHTT--TCCCEEEESSCSH-
T ss_pred             EECCCcHHHHHHHHHHHHCC-CEEEEEe-CHHHHH-HHHHcCCcEEEECCCchHHH-HHHHHcc--CCccEEEECCCch-
Confidence            57899999998888776664 4666665 566655 3344432   4555544333 3333322  4699999999962 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc-cCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL-RSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l-~~~g~ii~~sS~~  124 (230)
                               +               ..+..+..+ +++|+++.++...
T Consensus       243 ---------~---------------~~~~~~~~l~~~~G~iv~~g~~~  266 (371)
T 3gqv_A          243 ---------E---------------STTFCFAAIGRAGGHYVSLNPFP  266 (371)
T ss_dssp             ---------H---------------HHHHHHHHSCTTCEEEEESSCCC
T ss_pred             ---------H---------------HHHHHHHHhhcCCCEEEEEecCc
Confidence                     0               122334445 4689999887544

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.91  E-value=0.0076  Score=49.94  Aligned_cols=113  Identities=16%  Similarity=0.093  Sum_probs=66.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhccc--CCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLD--ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~~D--~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |.+|.+++..|+..|.. .|++.++++++++....++..+.  +.....+... .. .+.+..-|++|.++|...
T Consensus         5 ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d-~~a~~~aDiVViaag~~~   81 (294)
T 1oju_A            5 FVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-AD-YSLLKGSEIIVVTAGLAR   81 (294)
T ss_dssp             EECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-SC-GGGGTTCSEEEECCCCCC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-CC-HHHhCCCCEEEECCCCCC
Confidence            4677 99999999999998543 89999999987764333332211  0000000000 00 122347899999999753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      ..   ..+   -.+.+..|..-...+++.+.++ .+++.++++|..
T Consensus        82 kp---G~~---R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNP  120 (294)
T 1oju_A           82 KP---GMT---RLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNP  120 (294)
T ss_dssp             CS---SCC---HHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSS
T ss_pred             CC---CCc---HHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCc
Confidence            11   122   2345677766666666666554 456777777743

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.88  E-value=0.022  Score=48.28  Aligned_cols=114  Identities=18%  Similarity=0.116  Sum_probs=64.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC------CeEEEEecCcc--hhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD------GIIYLTARDAS--RGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~------~~vi~~~r~~~--~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+||+|+||..++..|+...-      ..+.+.+..+.  .++....++..+...-...+.. -....+.+..-|++|..
T Consensus        29 ViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~-~~~~~~a~~~advVvi~  107 (345)
T 4h7p_A           29 VTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVV-TADPRVAFDGVAIAIMC  107 (345)
T ss_dssp             EESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEE-ESCHHHHTTTCSEEEEC
T ss_pred             EECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEE-cCChHHHhCCCCEEEEC
Confidence            689999999999999987522      25888887654  3444445554422110000000 00001124589999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      +|.... +  .++   -.+.++.|..=.-.+.+.+.++-.+...|+.+|
T Consensus       108 aG~prk-p--Gmt---R~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A          108 GAFPRK-A--GME---RKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             CCCCCC-T--TCC---HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCCCCC-C--CCC---HHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            998531 1  122   344566676655555555544333445566555

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.83  E-value=0.021  Score=42.09  Aligned_cols=67  Identities=12%  Similarity=0.048  Sum_probs=45.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc-chhHHHHHhh------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRGQEALEKL------QKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~-~~~~~~~~~~------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      |+|+ |.+|..+++.|.+. +..|+++++++ ++.+...+..      ...|.++++.++++      ...+.|++|.+.
T Consensus         8 I~G~-G~vG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~   79 (153)
T 1id1_A            8 VCGH-SILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKA------GIDRCRAILALS   79 (153)
T ss_dssp             EECC-SHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHH------TTTTCSEEEECS
T ss_pred             EECC-CHHHHHHHHHHHHC-CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHc------ChhhCCEEEEec
Confidence            4564 99999999999998 56777777764 4443333222      12799998876554      123789999877


Q ss_pred             CC
Q psy7994          74 AI   75 (230)
Q Consensus        74 g~   75 (230)
                      +.
T Consensus        80 ~~   81 (153)
T 1id1_A           80 DN   81 (153)
T ss_dssp             SC
T ss_pred             CC
Confidence            63

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.64  E-value=0.011  Score=50.05  Aligned_cols=92  Identities=11%  Similarity=0.032  Sum_probs=58.4

Q ss_pred             CCCCCCcHHHHH-HHHH-HHhcCCeEEEEecCcc---hhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGI-VKGL-IQQFDGIIYLTARDAS---RGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~-a~~l-a~~g~~~vi~~~r~~~---~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      |+|+ |++|... +..+ ...|...|+.++++++   +++.+. ++..  .|..++ ++.+ +.++   .+++|++|.++
T Consensus       178 V~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~lGa~~v~~~~~-~~~~-i~~~---~gg~Dvvid~~  250 (357)
T 2b5w_A          178 VLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-ELDATYVDSRQT-PVED-VPDV---YEQMDFIYEAT  250 (357)
T ss_dssp             EECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HTTCEEEETTTS-CGGG-HHHH---SCCEEEEEECS
T ss_pred             EECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-HcCCcccCCCcc-CHHH-HHHh---CCCCCEEEECC
Confidence            5788 9999988 6644 4454444889998887   666543 3321  233332 2333 4444   24799999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      |..          .               ..+..+..++++|+++.++...
T Consensus       251 g~~----------~---------------~~~~~~~~l~~~G~iv~~g~~~  276 (357)
T 2b5w_A          251 GFP----------K---------------HAIQSVQALAPNGVGALLGVPS  276 (357)
T ss_dssp             CCH----------H---------------HHHHHHHHEEEEEEEEECCCCC
T ss_pred             CCh----------H---------------HHHHHHHHHhcCCEEEEEeCCC
Confidence            852          0               1234455668889999998765

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=95.62  E-value=0.024  Score=48.97  Aligned_cols=67  Identities=21%  Similarity=0.248  Sum_probs=47.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|+ |++|..+++.|...|...|++.+|+.++.+.....+. +++.+.+++.+.+       ...|+||++.|..
T Consensus       172 IiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g-~~~~~~~~l~~~l-------~~aDvVi~at~~~  238 (404)
T 1gpj_A          172 VVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-GEAVRFDELVDHL-------ARSDVVVSATAAP  238 (404)
T ss_dssp             EESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-CEECCGGGHHHHH-------HTCSEEEECCSSS
T ss_pred             EECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC-CceecHHhHHHHh-------cCCCEEEEccCCC
Confidence            3465 9999999999999966699999999888766655543 2333333444433       2689999998753

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.60  E-value=0.021  Score=47.46  Aligned_cols=87  Identities=17%  Similarity=0.185  Sum_probs=55.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|++|...+..+...|. .|+.+.+. ++. +.++++..   +|..+.+.+.+.       ..++|++|.++|.. 
T Consensus       158 V~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~-~~~-~~~~~lGa~~~i~~~~~~~~~~~-------~~g~D~v~d~~g~~-  226 (321)
T 3tqh_A          158 IHAGAGGVGHLAIQLAKQKGT-TVITTASK-RNH-AFLKALGAEQCINYHEEDFLLAI-------STPVDAVIDLVGGD-  226 (321)
T ss_dssp             ESSTTSHHHHHHHHHHHHTTC-EEEEEECH-HHH-HHHHHHTCSEEEETTTSCHHHHC-------CSCEEEEEESSCHH-
T ss_pred             EEcCCcHHHHHHHHHHHHcCC-EEEEEecc-chH-HHHHHcCCCEEEeCCCcchhhhh-------ccCCCEEEECCCcH-
Confidence            679999999999887777754 77766643 333 33333322   455544422221       24799999999851 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                               .++..+..++++|+++.++..
T Consensus       227 -------------------------~~~~~~~~l~~~G~iv~~g~~  247 (321)
T 3tqh_A          227 -------------------------VGIQSIDCLKETGCIVSVPTI  247 (321)
T ss_dssp             -------------------------HHHHHGGGEEEEEEEEECCST
T ss_pred             -------------------------HHHHHHHhccCCCEEEEeCCC
Confidence                                     013456677888999988643

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.55  E-value=0.026  Score=47.29  Aligned_cols=97  Identities=15%  Similarity=0.148  Sum_probs=60.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |++|...+..+...++..|+.+++++++++...+.-..  +|.++++..+++.+.. . -..+|.++.+++..  
T Consensus       169 V~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t-~-g~g~d~~~~~~~~~--  243 (348)
T 4eez_A          169 IFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKIT-G-GLGVQSAIVCAVAR--  243 (348)
T ss_dssp             EECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHT-T-SSCEEEEEECCSCH--
T ss_pred             EEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhc-C-CCCceEEEEeccCc--
Confidence            4554 78888778777778788999999998876644332211  5666665554443322 1 12578888888752  


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                              +               .....+..+++.|+++.++....
T Consensus       244 --------~---------------~~~~~~~~l~~~G~~v~~g~~~~  267 (348)
T 4eez_A          244 --------I---------------AFEQAVASLKPMGKMVAVAVPNT  267 (348)
T ss_dssp             --------H---------------HHHHHHHTEEEEEEEEECCCCSC
T ss_pred             --------c---------------hhheeheeecCCceEEEEeccCC
Confidence                    1               12233345678889888875444

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.54  E-value=0.065  Score=43.05  Aligned_cols=28  Identities=21%  Similarity=0.150  Sum_probs=25.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDA   31 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~   31 (230)
                      |.||+|..+++.|+..|...|.+++++.
T Consensus        38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           38 GLGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             eeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            4689999999999999878999999887

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.44  E-value=0.0059  Score=50.15  Aligned_cols=65  Identities=17%  Similarity=0.249  Sum_probs=43.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+|+ ||+|++++..|++.|...|.+.+|+.++.+...+.+.   ....+++...       ....|+|||+....
T Consensus       122 vlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~---~~~~~~~~~~-------~~~aDiVInaTp~G  186 (277)
T 3don_A          122 ILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNIN---KINLSHAESH-------LDEFDIIINTTPAG  186 (277)
T ss_dssp             EECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCE---EECHHHHHHT-------GGGCSEEEECCC--
T ss_pred             EECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcc---cccHhhHHHH-------hcCCCEEEECccCC
Confidence            4565 7999999999999977689999999887665443322   2223333222       23689999998764

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.38  E-value=0.059  Score=44.91  Aligned_cols=113  Identities=17%  Similarity=0.127  Sum_probs=66.8

Q ss_pred             CCCCCCcHHHHHHHHHHHh-c-CCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHH-HHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-F-DGIIYLTARDASRGQEALEKLQKLDILDKNSIKALH-DHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g-~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~-~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|.+|.+++..|+.+ + ...|+++++++ +.+....++..++..  -.+.... ....+.+...|++|.++|...
T Consensus         5 IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~--~~v~~~~~~~~~~~~~~aDivii~ag~~r   81 (312)
T 3hhp_A            5 VLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTA--VKIKGFSGEDATPALEGADVVLISAGVAR   81 (312)
T ss_dssp             EETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSS--EEEEEECSSCCHHHHTTCSEEEECCSCSC
T ss_pred             EECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCC--ceEEEecCCCcHHHhCCCCEEEEeCCCCC
Confidence            6799999999999999886 3 35899999887 455555555443210  0000000 001122347999999999753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      . +  .+   .-.+.++.|..-...+.+.+.++ .+++.++++|-.
T Consensus        82 k-p--G~---~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNP  120 (312)
T 3hhp_A           82 K-P--GM---DRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNP  120 (312)
T ss_dssp             C-T--TC---CHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSC
T ss_pred             C-C--CC---CHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCc
Confidence            1 1  12   23456666666666666655543 245667776643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.37  E-value=0.031  Score=45.59  Aligned_cols=60  Identities=15%  Similarity=0.119  Sum_probs=44.4

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      .| +||.|++++..|++.| ..|.+.+|+.++.+... ++. +.....+++           ...|+|||+....
T Consensus       124 lG-aGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la-~~~-~~~~~~~~l-----------~~~DiVInaTp~G  183 (269)
T 3phh_A          124 LG-AGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQ-RLG-CDCFMEPPK-----------SAFDLIINATSAS  183 (269)
T ss_dssp             EC-CSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHH-HHT-CEEESSCCS-----------SCCSEEEECCTTC
T ss_pred             EC-CCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHH-HCC-CeEecHHHh-----------ccCCEEEEcccCC
Confidence            45 5999999999999997 89999999999988776 543 221111111           1689999998765

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.32  E-value=0.065  Score=44.78  Aligned_cols=96  Identities=9%  Similarity=0.110  Sum_probs=61.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |++|...+..+...|...++.+++++++++.+. ++-.   +|.++.+. .+...++.+ ....|+++.++|.. 
T Consensus       166 V~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~~~-~~~~~~~~~-~~g~d~v~d~~G~~-  240 (346)
T 4a2c_A          166 IIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEMSA-PQMQSVLRE-LRFNQLILETAGVP-  240 (346)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEETTTSCH-HHHHHHHGG-GCSSEEEEECSCSH-
T ss_pred             EECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCCeEEEeCCCCCH-HHHHHhhcc-cCCccccccccccc-
Confidence            4555 899998888777787778888888888766443 3322   45554433 333444333 35789999998852 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                               +               ..+..+..++++|+++.++...+
T Consensus       241 ---------~---------------~~~~~~~~l~~~G~~v~~g~~~~  264 (346)
T 4a2c_A          241 ---------Q---------------TVELAVEIAGPHAQLALVGTLHQ  264 (346)
T ss_dssp             ---------H---------------HHHHHHHHCCTTCEEEECCCCSS
T ss_pred             ---------c---------------hhhhhhheecCCeEEEEEeccCC
Confidence                     1               12233445678899998886654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.32  E-value=0.033  Score=47.72  Aligned_cols=110  Identities=15%  Similarity=0.063  Sum_probs=62.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |.| +|++|...+......|...|+.+++++++++.+. ++..  +|.++.+.+.+.+.++.. -.++|++|.++|....
T Consensus       191 V~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~i~~~~~~~~~~~v~~~t~-g~g~Dvvid~~G~~~~  267 (398)
T 1kol_A          191 VAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLDTPLHEQIAALLG-EPEVDCAVDAVGFEAR  267 (398)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSSSCHHHHHHHHHS-SSCEEEEEECCCTTCB
T ss_pred             EEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-HcCCcEEccCCcchHHHHHHHHhC-CCCCCEEEECCCCccc
Confidence            467 5999998887666665558888988888776553 2321  454443323333333221 1269999999996311


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      ..    ..+..      |...+-..++..+..++++|+++.++..
T Consensus       268 ~~----~~~~~------~~~~~~~~~~~~~~~l~~~G~iv~~G~~  302 (398)
T 1kol_A          268 GH----GHEGA------KHEAPATVLNSLMQVTRVAGKIGIPGLY  302 (398)
T ss_dssp             CS----STTGG------GSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             cc----ccccc------cccchHHHHHHHHHHHhcCCEEEEeccc
Confidence            00    00000      0011111234455667888999988754

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.29  E-value=0.02  Score=48.41  Aligned_cols=96  Identities=13%  Similarity=0.127  Sum_probs=51.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchh---HHHHHhhhccc-CCCHHHHH-HHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRG---QEALEKLQKLD-ILDKNSIK-ALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~---~~~~~~~~~~D-~s~~~~v~-~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|++|++|...+......| ..++.+.+..++.   .+.+.++. +| +-+.++.. .-+.++....+++|++|.++|.
T Consensus       173 V~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~~~~~~~~~lG-a~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~  250 (357)
T 1zsy_A          173 QNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQKLSDRLKSLG-AEHVITEEELRRPEMKNFFKDMPQPRLALNCVGG  250 (357)
T ss_dssp             ESSTTSHHHHHHHHHHHHHT-CEEEEEECCCSCHHHHHHHHHHTT-CSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCH
T ss_pred             EeCCcCHHHHHHHHHHHHcC-CEEEEEecCccchHHHHHHHHhcC-CcEEEecCcchHHHHHHHHhCCCCceEEEECCCc
Confidence            68999999998877666664 4455444433221   22333332 22 11222110 1111221222359999999985


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      ..                          +...+..++++|+++.++...
T Consensus       251 ~~--------------------------~~~~~~~l~~~G~iv~~G~~~  273 (357)
T 1zsy_A          251 KS--------------------------STELLRQLARGGTMVTYGGMA  273 (357)
T ss_dssp             HH--------------------------HHHHHTTSCTTCEEEECCCCT
T ss_pred             HH--------------------------HHHHHHhhCCCCEEEEEecCC
Confidence            20                          112356678899999987543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.19  E-value=0.031  Score=46.91  Aligned_cols=113  Identities=12%  Similarity=0.078  Sum_probs=67.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcc-cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKL-DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~-D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |.+|.+++..|+..|. ..|++.++++++++....++..+ -+.. ..+. +...-.+.+..-|++|.++|....
T Consensus        10 ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~-~~v~-i~~~~~~a~~~aDvVvi~ag~p~k   86 (326)
T 3pqe_A           10 LIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAP-QPVK-TSYGTYEDCKDADIVCICAGANQK   86 (326)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSS-SCCE-EEEECGGGGTTCSEEEECCSCCCC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhcccccc-CCeE-EEeCcHHHhCCCCEEEEecccCCC
Confidence            4675 9999999999999864 38999999988887766555542 0000 0000 000001234578999999997431


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                       +  ..   .-.+.+..|+.-...+++.+.++ .+++.++++|..
T Consensus        87 -p--G~---~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNP  124 (326)
T 3pqe_A           87 -P--GE---TRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNP  124 (326)
T ss_dssp             -T--TC---CHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred             -C--Cc---cHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCCh
Confidence             1  11   23345667766666666666543 245677777643

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.18  E-value=0.11  Score=42.83  Aligned_cols=28  Identities=21%  Similarity=0.125  Sum_probs=25.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDA   31 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~   31 (230)
                      |.||+|..+++.|+..|...+.+++.+.
T Consensus        43 GaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           43 GVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            5799999999999999888999988876

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.15  E-value=0.028  Score=43.91  Aligned_cols=67  Identities=18%  Similarity=0.198  Sum_probs=49.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |+|+ |.+|..+++.|.++ +..|++.+++++..+...+..    ...|.++++.++++      ...+.|++|.+.+.
T Consensus         5 IiG~-G~~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~~~   75 (218)
T 3l4b_C            5 IIGG-ETTAYYLARSMLSR-KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDA------EVSKNDVVVILTPR   75 (218)
T ss_dssp             EECC-HHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHH------TCCTTCEEEECCSC
T ss_pred             EECC-CHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhc------CcccCCEEEEecCC
Confidence            4565 88999999999998 567888899998887655432    23799998776644      12478999877653

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.07  E-value=0.033  Score=46.87  Aligned_cols=91  Identities=16%  Similarity=0.151  Sum_probs=52.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|++|++|...+......|+..|+.++ +.++.+...  +..   +| .+.+ ..+.+.++.  -+.+|++|.+.|...
T Consensus       148 V~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~~~-~~~~~~~~~--~~g~Dvv~d~~g~~~  220 (349)
T 4a27_A          148 VHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFD-RNAD-YVQEVKRIS--AEGVDIVLDCLCGDN  220 (349)
T ss_dssp             ESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEE-TTSC-HHHHHHHHC--TTCEEEEEEECC---
T ss_pred             EEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEc-CCcc-HHHHHHHhc--CCCceEEEECCCchh
Confidence            6899999999877755455566777766 444444332  221   34 3333 333333332  247999999998521


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                                ++..+..++++|+++.++...
T Consensus       221 --------------------------~~~~~~~l~~~G~~v~~G~~~  241 (349)
T 4a27_A          221 --------------------------TGKGLSLLKPLGTYILYGSSN  241 (349)
T ss_dssp             ------------------------------CTTEEEEEEEEEEC---
T ss_pred             --------------------------HHHHHHHhhcCCEEEEECCCc
Confidence                                      133466778899999987643

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.06  E-value=0.018  Score=46.61  Aligned_cols=63  Identities=13%  Similarity=0.186  Sum_probs=44.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+||+|++++..|++.|...|++.+|+.++.+...+++...   ..+++.+.+.       ..|+|||+....
T Consensus       115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~---~~~~~~~~~~-------~aDiVInatp~g  177 (253)
T 3u62_A          115 GAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIF---SLDQLDEVVK-------KAKSLFNTTSVG  177 (253)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEE---EGGGHHHHHH-------TCSEEEECSSTT
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccC---CHHHHHhhhc-------CCCEEEECCCCC
Confidence            35899999999999997768999999988776655444321   2233333332       689999988653

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.03  E-value=0.06  Score=45.15  Aligned_cols=112  Identities=14%  Similarity=0.105  Sum_probs=60.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |+|+ |.+|.+++..|+..+. ..|++.++++++++....++..+..... .+. +...-.+.+..-|++|+++|.... 
T Consensus        14 ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~-~~~-i~~~~~~a~~~aDiVvi~ag~~~k-   89 (326)
T 3vku_A           14 LVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTS-PKK-IYSAEYSDAKDADLVVITAGAPQK-   89 (326)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSC-CCE-EEECCGGGGTTCSEEEECCCCC---
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcC-CcE-EEECcHHHhcCCCEEEECCCCCCC-
Confidence            4675 9999999999999865 3899999998888776666554210000 000 000002234578999999997531 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      +     .+.-.+.++.|..=...+++.+.++ .+++.++++|.
T Consensus        90 p-----G~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvtN  126 (326)
T 3vku_A           90 P-----GETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAAN  126 (326)
T ss_dssp             -------------------CHHHHHHHHHTT-TCCSEEEECSS
T ss_pred             C-----CchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEccC
Confidence            1     1122345566665555566655443 23566666653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=94.96  E-value=0.037  Score=45.52  Aligned_cols=62  Identities=19%  Similarity=0.339  Sum_probs=45.4

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      .| +||.|++++..|.+.|...|.+.+|+.++.++..+.+...   ..++       +.+ . ..|+|||+....
T Consensus       128 lG-aGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~---~~~~-------l~~-l-~~DivInaTp~G  189 (282)
T 3fbt_A          128 LG-SGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVI---SYDE-------LSN-L-KGDVIINCTPKG  189 (282)
T ss_dssp             EC-SSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEE---EHHH-------HTT-C-CCSEEEECSSTT
T ss_pred             EC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcc---cHHH-------HHh-c-cCCEEEECCccC
Confidence            45 4799999999999997779999999998887776655321   2222       222 3 689999998654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=94.93  E-value=0.014  Score=43.20  Aligned_cols=67  Identities=9%  Similarity=-0.031  Sum_probs=45.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh----hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK----LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~----~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| .|.+|..+++.|.+.| ..|+++++++++.+.....    +...|.++++.+.+.      .....|++|.+.+.
T Consensus        24 IiG-~G~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~------~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           24 IFG-CGRLGSLIANLASSSG-HSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKEC------GMEKADMVFAFTND   94 (155)
T ss_dssp             EEC-CSHHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTT------TGGGCSEEEECSSC
T ss_pred             EEC-CCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHc------CcccCCEEEEEeCC
Confidence            456 5999999999999984 5888899988876543311    111466665543321      12368999988874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=94.91  E-value=0.055  Score=46.10  Aligned_cols=71  Identities=10%  Similarity=0.051  Sum_probs=46.6

Q ss_pred             CCC-CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTG-ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG-~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| |+|++|...+..+...| ..|+.+++++++++...+ +..   +|..+++-.+.+.+....  .++|++|.++|.
T Consensus       176 V~gag~G~vG~~a~q~a~~~G-a~Vi~~~~~~~~~~~~~~-lGa~~~~~~~~~~~~~~v~~~t~~--~g~d~v~d~~g~  250 (379)
T 3iup_A          176 VHTAAASNLGQMLNQICLKDG-IKLVNIVRKQEQADLLKA-QGAVHVCNAASPTFMQDLTEALVS--TGATIAFDATGG  250 (379)
T ss_dssp             EESSTTSHHHHHHHHHHHHHT-CCEEEEESSHHHHHHHHH-TTCSCEEETTSTTHHHHHHHHHHH--HCCCEEEESCEE
T ss_pred             EECCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHh-CCCcEEEeCCChHHHHHHHHHhcC--CCceEEEECCCc
Confidence            345 89999998888777774 478888888887765543 322   455554433333332221  269999999996

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=94.89  E-value=0.073  Score=38.49  Aligned_cols=64  Identities=11%  Similarity=0.022  Sum_probs=47.5

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      .|.+|..+++.|.+. +..|++++++++..+...+.-   ...|.++++.++++      ...+.|++|.+.+.
T Consensus        15 ~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~~~   81 (140)
T 3fwz_A           15 YGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLA------HLECAKWLILTIPN   81 (140)
T ss_dssp             CSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHT------TGGGCSEEEECCSC
T ss_pred             cCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhc------CcccCCEEEEECCC
Confidence            488999999999998 568888999998877655421   12689988876553      12368898877664

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=94.83  E-value=0.041  Score=47.07  Aligned_cols=115  Identities=15%  Similarity=-0.021  Sum_probs=64.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-e---EEEEecCcc----hhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-I---IYLTARDAS----RGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~---vi~~~r~~~----~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+||+|.||.+++..|+..+-. .   |++...+.+    +++....++..+...-...+. ....-.+.+..-|++|..
T Consensus        37 ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~-i~~~~y~~~~daDvVVit  115 (375)
T 7mdh_A           37 VSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS-IGIDPYEVFEDVDWALLI  115 (375)
T ss_dssp             EETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE-EESCHHHHTTTCSEEEEC
T ss_pred             EECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE-EecCCHHHhCCCCEEEEc
Confidence            6899999999999999987543 2   666555443    355555555543210000000 001112334589999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      +|.... +     .+.-.+.++.|..=.-.+.+.+.+...+++.|+.+|.
T Consensus       116 ag~prk-p-----G~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          116 GAKPRG-P-----GMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             CCCCCC-T-----TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            997531 1     1223445666665555555555443344566666663

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=94.81  E-value=0.0086  Score=50.07  Aligned_cols=108  Identities=12%  Similarity=0.080  Sum_probs=66.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcc--------cCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKL--------DILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~--------D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      |+|+ |.+|.+++..|+..+. ..|++.++++++++....++..+        .+.-.        ...+.+..-|++|.
T Consensus         5 ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~--------~~~~a~~~aDvVii   75 (314)
T 3nep_X            5 VIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT--------NDYGPTEDSDVCII   75 (314)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE--------SSSGGGTTCSEEEE
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC--------CCHHHhCCCCEEEE
Confidence            4675 9999999999999854 38999999998877655444431        11100        01223457899999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      ++|.... +     .+.-.+.+..|+.-...+++.+.++ .+++.++++|...
T Consensus        76 ~ag~~~k-p-----G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPv  121 (314)
T 3nep_X           76 TAGLPRS-P-----GMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPL  121 (314)
T ss_dssp             CCCC-------------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSH
T ss_pred             CCCCCCC-C-----CCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCch
Confidence            9998531 1     1122345666666556666666543 3457777777543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=94.73  E-value=0.11  Score=43.67  Aligned_cols=68  Identities=15%  Similarity=0.054  Sum_probs=45.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.|+ |.+|.+++..|+..|...|++.++++++++.....+..        ..++--.+.++.+       ..-|++|.+
T Consensus        14 VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~-------~~aDiVi~a   85 (331)
T 1pzg_A           14 MIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAAL-------TGADCVIVT   85 (331)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHH-------TTCSEEEEC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHh-------CCCCEEEEc
Confidence            4676 99999999999998653699999999877764433322        1121011222222       378999999


Q ss_pred             cCCc
Q psy7994          73 AAIA   76 (230)
Q Consensus        73 ag~~   76 (230)
                      +|..
T Consensus        86 ~g~p   89 (331)
T 1pzg_A           86 AGLT   89 (331)
T ss_dssp             CSCS
T ss_pred             cCCC
Confidence            9875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=94.67  E-value=0.024  Score=47.68  Aligned_cols=85  Identities=21%  Similarity=0.279  Sum_probs=57.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccC--CCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDI--LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~--s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |++|...+..+... +..|+.+++++++.+.+.+ +. .|.  ++.+.+.+          ++|++|.++|... 
T Consensus       182 V~Ga-G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~-lG-a~~v~~~~~~~~~----------~~D~vid~~g~~~-  246 (348)
T 3two_A          182 VAGF-GGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS-MG-VKHFYTDPKQCKE----------ELDFIISTIPTHY-  246 (348)
T ss_dssp             EESC-SHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH-TT-CSEEESSGGGCCS----------CEEEEEECCCSCC-
T ss_pred             EECC-cHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh-cC-CCeecCCHHHHhc----------CCCEEEECCCcHH-
Confidence            5676 89999888766666 4589999999888775533 32 221  34332211          7999999998630 


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                              ..+..+..++++|+++.++...
T Consensus       247 ------------------------~~~~~~~~l~~~G~iv~~G~~~  268 (348)
T 3two_A          247 ------------------------DLKDYLKLLTYNGDLALVGLPP  268 (348)
T ss_dssp             ------------------------CHHHHHTTEEEEEEEEECCCCC
T ss_pred             ------------------------HHHHHHHHHhcCCEEEEECCCC
Confidence                                    1233455678889999997655

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=94.61  E-value=0.017  Score=48.65  Aligned_cols=114  Identities=11%  Similarity=0.095  Sum_probs=69.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhccc-CCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLD-ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D-~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |.+|.+++..|+.+|. ..|++.+++.++++....++..+. +.....+.. ... .+.+..-|++|.++|....
T Consensus        24 ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-~~d-~~~~~~aDiVvi~aG~~~k  100 (331)
T 4aj2_A           24 VVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVS-SKD-YSVTANSKLVIITAGARQQ  100 (331)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEE-CSS-GGGGTTEEEEEECCSCCCC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEE-cCC-HHHhCCCCEEEEccCCCCC
Confidence            4676 8999999999999854 379999999888887766665421 000000000 000 1124579999999998532


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                       +  .++   -.+.++.|..=...+++.+.++ .+++.++++|...
T Consensus       101 -p--G~t---R~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPv  139 (331)
T 4aj2_A          101 -E--GES---RLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPV  139 (331)
T ss_dssp             -T--TCC---GGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred             -C--Ccc---HHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChH
Confidence             1  122   2345666665555566655543 4567777777443

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=94.61  E-value=0.064  Score=44.94  Aligned_cols=107  Identities=15%  Similarity=0.051  Sum_probs=62.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc--------cCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL--------DILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~--------D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|+ |.+|.+++..|+..|...|++.++++++++....++..+        .+.-..+        .+.+..-|++|.+
T Consensus        12 viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d--------~~a~~~aDiVIia   82 (324)
T 3gvi_A           12 LIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND--------YAAIEGADVVIVT   82 (324)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS--------GGGGTTCSEEEEC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC--------HHHHCCCCEEEEc
Confidence            4576 999999999999985438999999998876544444321        1110000        1223478999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      +|.... +  ..   .-.+.+..|..-...+++.+..+- +++.++++|..
T Consensus        83 ag~p~k-~--G~---~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNP  126 (324)
T 3gvi_A           83 AGVPRK-P--GM---SRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNP  126 (324)
T ss_dssp             CSCCCC-----------CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred             cCcCCC-C--CC---CHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCC
Confidence            997532 1  11   122345556555555555554432 45666666643

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=94.55  E-value=0.097  Score=42.06  Aligned_cols=74  Identities=14%  Similarity=0.175  Sum_probs=51.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|++|.+|+.+++.+.+..+..|+......+.++.....-.+  +|++.++.+...+..+.+.  ++++|+-..|+.
T Consensus         5 V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~--g~~~VigTTG~~   80 (245)
T 1p9l_A            5 VLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDN--GIHAVVGTTGFT   80 (245)
T ss_dssp             EETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHT--TCEEEECCCCCC
T ss_pred             EECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHc--CCCEEEcCCCCC
Confidence            5789999999999998876345555443333445544331112  7999999999888877664  788999888753

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=94.52  E-value=0.08  Score=44.27  Aligned_cols=106  Identities=13%  Similarity=0.058  Sum_probs=65.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc--------cCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL--------DILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~--------D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+| +|.+|.+++..|+..+...|++.++++++++....++..+        .+.-..+        .+.+..-|++|.+
T Consensus        10 iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d--------~~a~~~aDvVIi~   80 (321)
T 3p7m_A           10 LVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND--------YKDLENSDVVIVT   80 (321)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC--------GGGGTTCSEEEEC
T ss_pred             EEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC--------HHHHCCCCEEEEc
Confidence            456 5999999999999985338999999998877655555431        1210000        1234478999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      +|.... +  ..+   -.+.+..|..-...+++.+.++- +++.+++++-
T Consensus        81 ag~p~k-~--G~~---R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtN  123 (321)
T 3p7m_A           81 AGVPRK-P--GMS---RDDLLGINIKVMQTVGEGIKHNC-PNAFVICITN  123 (321)
T ss_dssp             CSCCCC-T--TCC---HHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCS
T ss_pred             CCcCCC-C--CCC---HHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecC
Confidence            997532 1  122   23455566665555666554432 4566666653

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=94.51  E-value=0.17  Score=43.58  Aligned_cols=35  Identities=11%  Similarity=0.046  Sum_probs=28.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA   37 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~   37 (230)
                      |+| .|.+|..+++.+...| ..|+++++++.+++..
T Consensus       177 ViG-aG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          177 VIG-AGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EEC-CSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHH
T ss_pred             EEC-CCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHH
Confidence            345 4899999999999885 4899999998877765

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=94.33  E-value=0.076  Score=44.80  Aligned_cols=69  Identities=19%  Similarity=0.151  Sum_probs=45.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcC-CCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHG-GVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~-~id~lv~~ag~   75 (230)
                      |+|+ |++|...+..+...++..|+.+++++++++... ++..   +|..++  +.+.+.++..  + ++|++|.++|.
T Consensus       192 V~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~--~~~~v~~~~~--g~g~Dvvid~~G~  264 (359)
T 1h2b_A          192 IVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDARRD--PVKQVMELTR--GRGVNVAMDFVGS  264 (359)
T ss_dssp             EECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETTSC--HHHHHHHHTT--TCCEEEEEESSCC
T ss_pred             EECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCEEEeccch--HHHHHHHHhC--CCCCcEEEECCCC
Confidence            5788 899998887665561347889998888776554 3322   455554  3333443322  3 69999999986

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=94.29  E-value=0.055  Score=40.91  Aligned_cols=69  Identities=16%  Similarity=0.150  Sum_probs=46.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-h--hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-L--QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-~--~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| .|.+|..+++.|.+.++..|+++++++++.+...+. +  ..+|.++++.+.++     ....+.|++|.+.+.
T Consensus        44 IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~-----~~~~~ad~vi~~~~~  115 (183)
T 3c85_A           44 ILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERI-----LDTGHVKLVLLAMPH  115 (183)
T ss_dssp             EEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTB-----CSCCCCCEEEECCSS
T ss_pred             EEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhc-----cCCCCCCEEEEeCCC
Confidence            345 599999999999987234677888988877665432 1  12577777654432     013478999987763

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=94.14  E-value=0.082  Score=44.08  Aligned_cols=111  Identities=14%  Similarity=0.132  Sum_probs=64.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcc-cCC-CHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKL-DIL-DKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~-D~s-~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |.+|..++..|+.++. ..|++.++++++++.....+..+ ... ..-.+..  . -.+.+..-|++|.++|...
T Consensus        11 IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~--~-~~~a~~~aDvVvi~ag~~~   86 (317)
T 3d0o_A           11 LIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA--G-EYSDCHDADLVVICAGAAQ   86 (317)
T ss_dssp             EECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE--C-CGGGGTTCSEEEECCCCCC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe--C-CHHHhCCCCEEEECCCCCC
Confidence            5687 9999999999998843 58999999887776544443321 000 0000000  0 1223458999999999853


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      ..   ..+   -...+..|..-...+++.+.++ .+++.||++|-
T Consensus        87 ~~---g~~---r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN  124 (317)
T 3d0o_A           87 KP---GET---RLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATN  124 (317)
T ss_dssp             CT---TCC---HHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred             CC---CCc---HHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence            21   122   2234556655555566655544 45667777653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=94.08  E-value=0.11  Score=42.99  Aligned_cols=68  Identities=22%  Similarity=0.154  Sum_probs=45.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc------c--CCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL------D--ILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~------D--~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|+ |.+|..++..|+..|...|++.++++++++....++..+      +  ++.-.+       . +.+...|++|.+
T Consensus         7 VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-------~-~a~~~aD~Vi~a   77 (309)
T 1ur5_A            7 IIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN-------Y-ADTANSDVIVVT   77 (309)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-------G-GGGTTCSEEEEC
T ss_pred             EECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC-------H-HHHCCCCEEEEc
Confidence            5687 999999999999986536999999988777554444321      1  100001       1 223478999999


Q ss_pred             cCCcc
Q psy7994          73 AAIAF   77 (230)
Q Consensus        73 ag~~~   77 (230)
                      +|...
T Consensus        78 ~g~p~   82 (309)
T 1ur5_A           78 SGAPR   82 (309)
T ss_dssp             CCC--
T ss_pred             CCCCC
Confidence            99753

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=93.75  E-value=0.13  Score=42.55  Aligned_cols=105  Identities=16%  Similarity=0.117  Sum_probs=60.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCcchhHHHHHhhhcc--------cCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDASRGQEALEKLQKL--------DILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~~~~~~~~~~~~~~--------D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      |.|+ |.+|..++..|+..+ +..|++.++++++++.....+...        .+..-.+       . +.+...|++|.
T Consensus         5 VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d-------~-~~l~~aDvVii   75 (310)
T 1guz_A            5 VIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-------Y-ADTANSDIVII   75 (310)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-------G-GGGTTCSEEEE
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCC-------H-HHHCCCCEEEE
Confidence            4676 999999999999863 678999999988777543322210        1100000       1 11347899999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      +++.... +  ..+   ....+..|+.-...+++.+.++ .+++.+|+++
T Consensus        76 av~~p~~-~--g~~---r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~t  118 (310)
T 1guz_A           76 TAGLPRK-P--GMT---REDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVS  118 (310)
T ss_dssp             CCSCCCC-T--TCC---HHHHHHHHHHHHHHHHHHHHHH-CSSCEEEECC
T ss_pred             eCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEEc
Confidence            9986421 0  111   2234455555445555555444 2445555554

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=93.73  E-value=0.37  Score=40.85  Aligned_cols=63  Identities=13%  Similarity=0.017  Sum_probs=42.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|-+|..++..|++. ++.|++.+|++++.+...+.    .+....+.+++++.    ..++|+||.+...
T Consensus        29 GlG~mG~~~A~~L~~~-G~~V~v~dr~~~~~~~l~~~----g~~~~~s~~e~~~~----a~~~DvVi~~vp~   91 (358)
T 4e21_A           29 GLGRMGADMVRRLRKG-GHECVVYDLNVNAVQALERE----GIAGARSIEEFCAK----LVKPRVVWLMVPA   91 (358)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTT----TCBCCSSHHHHHHH----SCSSCEEEECSCG
T ss_pred             CchHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHC----CCEEeCCHHHHHhc----CCCCCEEEEeCCH
Confidence            4688999999999999 57888999998877765442    22222233444432    2356888877653

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=93.69  E-value=0.074  Score=44.38  Aligned_cols=111  Identities=16%  Similarity=0.141  Sum_probs=64.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhccc-CCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLD-ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D-~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |.+|..++..|+..+. ..|++.+.++++++....++..+. +...-.+..  .. .+.+..-|++|.++|....
T Consensus        12 IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~-~~a~~~aDvVii~~g~p~k   87 (318)
T 1y6j_A           12 IIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA--GD-YSDVKDCDVIVVTAGANRK   87 (318)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-GGGGTTCSEEEECCCC---
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE--CC-HHHhCCCCEEEEcCCCCCC
Confidence            5677 9999999999999843 379999999887776555554421 000000110  11 2235689999999997531


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      .   ..   .-.+.+..|+.-...+++.+.++ .+++.||++|-
T Consensus        88 ~---g~---~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN  124 (318)
T 1y6j_A           88 P---GE---TRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSN  124 (318)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSS
T ss_pred             C---Cc---CHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence            1   11   12345666766666667666654 35667777653

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=93.55  E-value=0.25  Score=41.18  Aligned_cols=110  Identities=16%  Similarity=0.049  Sum_probs=63.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC--cchhHHHHHhhhcccCCCHHHHHH----HH-HHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD--ASRGQEALEKLQKLDILDKNSIKA----LH-DHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~--~~~~~~~~~~~~~~D~s~~~~v~~----~~-~~~~~~~~~id~lv~~a   73 (230)
                      |.|+ |.+|.+++..|+..|...|++.+++  +++.+....++..+     .....    +. ..-.+.+..-|++|.++
T Consensus        13 ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~-----~~~~~~~~~i~~t~d~~a~~~aDvVIiaa   86 (315)
T 3tl2_A           13 VIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEA-----SPVQGFDANIIGTSDYADTADSDVVVITA   86 (315)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHH-----HHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHh-----hhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence            4575 9999999999999844389999998  44554443333221     00000    00 00012345899999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      |.... +  ..+   -.+.+..|..-...+.+.+.++ .+++.++++|..
T Consensus        87 g~p~k-p--g~~---R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNP  129 (315)
T 3tl2_A           87 GIARK-P--GMS---RDDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNP  129 (315)
T ss_dssp             SCCCC-T--TCC---HHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred             CCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCCh
Confidence            98532 1  122   2445666666555566655543 245677777643

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=93.53  E-value=0.23  Score=41.62  Aligned_cols=115  Identities=10%  Similarity=0.040  Sum_probs=67.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccC-CCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDI-LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~-s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |.+|..++..|+..|. ..|++.++++++++....++..+.. .....+.. .... +.+..-|++|.++|....
T Consensus        26 ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-t~d~-~~~~daDiVIitaG~p~k  102 (330)
T 3ldh_A           26 VVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS-GKDY-SVSAGSKLVVITAGARQQ  102 (330)
T ss_dssp             EEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE-ESSS-CSCSSCSEEEECCSCCCC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE-cCCH-HHhCCCCEEEEeCCCCCC
Confidence            4677 9999999999999864 3899999988887776655543210 00000000 0011 124578999999998532


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                       +  .++   -.+.+..|..=...+++.+.++ .+++.++++|....
T Consensus       103 -p--G~t---R~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPvd  142 (330)
T 3ldh_A          103 -E--GES---RLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELGT  142 (330)
T ss_dssp             -S--SCC---TTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred             -C--CCC---HHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCccH
Confidence             1  111   1234455554444455555444 45678888875443

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=93.47  E-value=0.096  Score=43.70  Aligned_cols=110  Identities=14%  Similarity=0.089  Sum_probs=61.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhccc-CCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLD-ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D-~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |.+|..++..|+..+. ..|++.++++++++....++..+. +...-.+..  . -.+.+..-|+||..+|....
T Consensus        10 IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~--~-~~~a~~~aDvVii~ag~~~~   85 (318)
T 1ez4_A           10 LVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS--G-EYSDCKDADLVVITAGAPQK   85 (318)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE--C-CGGGGTTCSEEEECCCC---
T ss_pred             EECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE--C-CHHHhCCCCEEEECCCCCCC
Confidence            5787 9999999999999843 379999999888877666554421 000000000  0 12234589999999998532


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      .   ..   .-.+.+..|+.-...+++.+.++ .+++.||++|
T Consensus        86 ~---g~---~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t  121 (318)
T 1ez4_A           86 P---GE---SRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA  121 (318)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred             C---CC---CHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeC
Confidence            1   11   11234455555555555554433 3456666665

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=93.46  E-value=0.042  Score=45.43  Aligned_cols=105  Identities=15%  Similarity=0.138  Sum_probs=63.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhc----ccC----CCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQK----LDI----LDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~----~D~----s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      |+| +|+||..++..|+.++- ..+++++.++++.+..+.++..    ++.    ....+        .+.+..-|++|.
T Consensus         5 IiG-aG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d--------~~~~~~aDvVvi   75 (294)
T 2x0j_A            5 FVG-AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD--------YSLLKGSEIIVV   75 (294)
T ss_dssp             EEC-CSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESC--------GGGGTTCSEEEE
T ss_pred             EEC-cCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCC--------HHHhCCCCEEEE
Confidence            567 59999999999998864 5899999988777666555543    111    00000        012347899999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      .||.... +  .++   -.+.++.|..=.-.+.+.+.++ .+++.++.+|
T Consensus        76 tAG~prk-p--Gmt---R~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvs  118 (294)
T 2x0j_A           76 TAGLARK-P--GMT---RLDLAHKNAGIIKDIAKKIVEN-APESKILVVT  118 (294)
T ss_dssp             CCCCCCC-S--SSC---HHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred             ecCCCCC-C--CCc---hHHHHHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence            9998531 1  122   3445666665555555555432 2345566555

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=93.45  E-value=0.062  Score=50.52  Aligned_cols=92  Identities=22%  Similarity=0.278  Sum_probs=54.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.|++||+|.+.+...... +..|+.+.+++ +.+.. . +..   +|..+.+-.+.+.+ +.. -.++|+++++.|.. 
T Consensus       351 I~gaaGgvG~~aiqlAk~~-Ga~V~~t~~~~-k~~~l-~-lga~~v~~~~~~~~~~~i~~-~t~-g~GvDvVld~~gg~-  423 (795)
T 3slk_A          351 VHSAAGGVGMAAIQLARHL-GAEVYATASED-KWQAV-E-LSREHLASSRTCDFEQQFLG-ATG-GRGVDVVLNSLAGE-  423 (795)
T ss_dssp             EESTTBHHHHHHHHHHHHT-TCCEEEECCGG-GGGGS-C-SCGGGEECSSSSTHHHHHHH-HSC-SSCCSEEEECCCTT-
T ss_pred             EecCCCHHHHHHHHHHHHc-CCEEEEEeChH-Hhhhh-h-cChhheeecCChhHHHHHHH-HcC-CCCeEEEEECCCcH-
Confidence            5799999999877755555 55777777654 32211 1 211   45555443333322 211 12699999988742 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                               .++..+..+++.|++|.++...
T Consensus       424 -------------------------~~~~~l~~l~~~Gr~v~iG~~~  445 (795)
T 3slk_A          424 -------------------------FADASLRMLPRGGRFLELGKTD  445 (795)
T ss_dssp             -------------------------TTHHHHTSCTTCEEEEECCSTT
T ss_pred             -------------------------HHHHHHHHhcCCCEEEEecccc
Confidence                                     0123455678899999987543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=93.29  E-value=0.19  Score=41.94  Aligned_cols=67  Identities=16%  Similarity=0.174  Sum_probs=45.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc------c--CCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL------D--ILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~------D--~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.|+ |.+|..++..|+..|...|++.++++++++.....+..+      +  ++...+       . +.+..-|+||.+
T Consensus         9 VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d-------~-~al~~aD~Vi~a   79 (322)
T 1t2d_A            9 LVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT-------Y-DDLAGADVVIVT   79 (322)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC-------G-GGGTTCSEEEEC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCC-------H-HHhCCCCEEEEe
Confidence            4676 999999999999986536999999998887655444331      1  110001       1 123478999999


Q ss_pred             cCCc
Q psy7994          73 AAIA   76 (230)
Q Consensus        73 ag~~   76 (230)
                      +|..
T Consensus        80 ~g~p   83 (322)
T 1t2d_A           80 AGFT   83 (322)
T ss_dssp             CSCS
T ss_pred             CCCC
Confidence            9974

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=93.25  E-value=0.071  Score=44.43  Aligned_cols=23  Identities=9%  Similarity=-0.041  Sum_probs=17.6

Q ss_pred             CcHHHHHHHHHHHhcCCeEEEEec
Q psy7994           6 KGIGYGIVKGLIQQFDGIIYLTAR   29 (230)
Q Consensus         6 ~giG~~~a~~la~~g~~~vi~~~r   29 (230)
                      |-+|.++|+.++++|+ .|+++.+
T Consensus        65 GkmG~aiAe~~~~~Ga-~V~lv~g   87 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGY-GVLFLYR   87 (313)
T ss_dssp             CHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred             cHHHHHHHHHHHHCCC-EEEEEec
Confidence            4499999999999965 5555554

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=93.22  E-value=0.12  Score=43.18  Aligned_cols=111  Identities=14%  Similarity=0.075  Sum_probs=64.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhccc-CCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLD-ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D-~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |.+|..++..|+..+. ..|++.++++++++....++..+. +...-.+..  . -.+.+..-|+||..+|....
T Consensus        14 IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~-~~~a~~~aDvVii~ag~~~k   89 (326)
T 2zqz_A           14 LVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS--A-EYSDAKDADLVVITAGAPQK   89 (326)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE--C-CGGGGGGCSEEEECCCCC--
T ss_pred             EECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE--C-CHHHhCCCCEEEEcCCCCCC
Confidence            5787 9999999999998753 379999999888877666554321 000000000  0 02223478999999997531


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      .   ..+   -...+..|+.-...+++.+.++ .+++.||++|-
T Consensus        90 ~---g~~---R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tN  126 (326)
T 2zqz_A           90 P---GET---RLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAAN  126 (326)
T ss_dssp             ------C---HHHHHHHHHHHHHHHHHHHHHH-TCCSEEEECSS
T ss_pred             C---CCC---HHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCC
Confidence            1   111   2234555655555555555443 35567777653

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=93.14  E-value=0.35  Score=38.75  Aligned_cols=28  Identities=21%  Similarity=0.146  Sum_probs=23.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDA   31 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~   31 (230)
                      |.||+|.++++.|+..|...+.+.+.+.
T Consensus        35 G~GglG~~va~~La~~Gvg~i~lvD~d~   62 (251)
T 1zud_1           35 GLGGLGTPAALYLAGAGVGTLVLADDDD   62 (251)
T ss_dssp             CCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred             ccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            4589999999999999888888886654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=93.13  E-value=0.94  Score=38.68  Aligned_cols=100  Identities=11%  Similarity=0.018  Sum_probs=61.0

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCC-------------CHHHHHHHHHHHHhhcCCCcEE
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDIL-------------DKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s-------------~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      .|.+|..+++.+...| ..|++.++++++++...+ +..  .++.             .++....-.+.+.+.....|+|
T Consensus       192 ~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIV  269 (381)
T 3p2y_A          192 VGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIV  269 (381)
T ss_dssp             CSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEE
T ss_pred             chHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEE
Confidence            4799999999999995 589999999988876654 211  1110             0111222233344445689999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      |.++.......                   +..+.+..+..|+++..||.++...|
T Consensus       270 I~tv~iPg~~a-------------------p~Lvt~emv~~MkpGsVIVDvA~d~G  306 (381)
T 3p2y_A          270 ITTALVPGRPA-------------------PRLVTAAAATGMQPGSVVVDLAGETG  306 (381)
T ss_dssp             EECCCCTTSCC-------------------CCCBCHHHHHTSCTTCEEEETTGGGT
T ss_pred             EECCCCCCccc-------------------ceeecHHHHhcCCCCcEEEEEeCCCC
Confidence            99876532110                   01112344556788888888887665

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=93.05  E-value=0.099  Score=44.74  Aligned_cols=37  Identities=14%  Similarity=0.054  Sum_probs=29.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE   39 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~   39 (230)
                      |+| .|++|..+++.+...|. .|++.++++.+++...+
T Consensus       177 ViG-aG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~  213 (384)
T 1l7d_A          177 VFG-VGVAGLQAIATAKRLGA-VVMATDVRAATKEQVES  213 (384)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHH
T ss_pred             EEC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence            345 58999999999998865 69999999887766543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=93.03  E-value=0.13  Score=42.71  Aligned_cols=110  Identities=14%  Similarity=0.086  Sum_probs=66.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhccc--CCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLD--ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D--~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |.+|.+++..|+.++. ..|++.++++++++....++..+.  ..+. .+..  .. .+.+..-|+||..+|...
T Consensus         5 IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~-~v~~--~~-~~a~~~aD~Vii~ag~~~   79 (310)
T 2xxj_A            5 IVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPV-WVWA--GS-YGDLEGARAVVLAAGVAQ   79 (310)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCC-EEEE--CC-GGGGTTEEEEEECCCCCC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCe-EEEE--CC-HHHhCCCCEEEECCCCCC
Confidence            5687 9999999999998742 479999999888876665554421  0000 0000  11 223458999999999853


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      . +  ..+   -...+..|..-...+++.+.++ .+++.||++|-
T Consensus        80 ~-~--g~~---r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tN  117 (310)
T 2xxj_A           80 R-P--GET---RLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATN  117 (310)
T ss_dssp             C-T--TCC---HHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSS
T ss_pred             C-C--CcC---HHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecC
Confidence            2 1  122   2234555655555555555443 35577777654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=93.02  E-value=0.12  Score=42.43  Aligned_cols=85  Identities=12%  Similarity=0.124  Sum_probs=54.1

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCCC
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEP   84 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~   84 (230)
                      .|.||+++++.|...| ..|++.+|+.++.+...+ + ..+..+.++++++       ....|+|+++....    +  .
T Consensus       165 ~G~iG~~~a~~l~~~G-~~V~~~d~~~~~~~~~~~-~-g~~~~~~~~l~~~-------l~~aDvVi~~~p~~----~--i  228 (300)
T 2rir_A          165 LGRTGMTIARTFAALG-ANVKVGARSSAHLARITE-M-GLVPFHTDELKEH-------VKDIDICINTIPSM----I--L  228 (300)
T ss_dssp             CSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHH-T-TCEEEEGGGHHHH-------STTCSEEEECCSSC----C--B
T ss_pred             ccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHH-C-CCeEEchhhHHHH-------hhCCCEEEECCChh----h--h
Confidence            5899999999999985 589999998876554322 1 1222122333333       24789999988751    0  0


Q ss_pred             ChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          85 FGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        85 ~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      +                   +..+..|++++.+|+++...
T Consensus       229 ~-------------------~~~~~~mk~g~~lin~a~g~  249 (300)
T 2rir_A          229 N-------------------QTVLSSMTPKTLILDLASRP  249 (300)
T ss_dssp             C-------------------HHHHTTSCTTCEEEECSSTT
T ss_pred             C-------------------HHHHHhCCCCCEEEEEeCCC
Confidence            1                   11235677888999998643

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=92.71  E-value=0.06  Score=43.84  Aligned_cols=63  Identities=19%  Similarity=0.385  Sum_probs=44.0

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      .| +|++|++++..|.+.|. .|.+.+|++++.+...+.+. +++.+  ++.+.       ....|+||++....
T Consensus       135 iG-aG~~g~aia~~L~~~g~-~V~v~~r~~~~~~~l~~~~g-~~~~~--~~~~~-------~~~aDiVi~atp~~  197 (275)
T 2hk9_A          135 LG-AGGASRAVIYALVKEGA-KVFLWNRTKEKAIKLAQKFP-LEVVN--SPEEV-------IDKVQVIVNTTSVG  197 (275)
T ss_dssp             EC-CSHHHHHHHHHHHHHTC-EEEEECSSHHHHHHHTTTSC-EEECS--CGGGT-------GGGCSEEEECSSTT
T ss_pred             EC-chHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHcC-Ceeeh--hHHhh-------hcCCCEEEEeCCCC
Confidence            35 58999999999999965 99999999887776655432 22221  11111       23689999999864

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=92.62  E-value=0.64  Score=38.36  Aligned_cols=28  Identities=14%  Similarity=-0.092  Sum_probs=23.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDA   31 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~   31 (230)
                      |.|-+|..++..|++.|...|++.+|++
T Consensus        31 G~G~mG~~~A~~L~~~G~~~V~~~dr~~   58 (312)
T 3qsg_A           31 GFGEAASAIASGLRQAGAIDMAAYDAAS   58 (312)
T ss_dssp             CCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred             CccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            4688999999999999543899999973

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=92.31  E-value=0.2  Score=41.22  Aligned_cols=83  Identities=11%  Similarity=0.112  Sum_probs=50.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCC-CHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDIL-DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s-~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |+|+ |++|...+......|. .|+.++ ++++.+...+ +.. |.. + + .    +++   -.++|++|.++|...  
T Consensus       148 V~Ga-G~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~-lGa-~~v~~-d-~----~~v---~~g~Dvv~d~~g~~~--  211 (315)
T 3goh_A          148 IVGF-GAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAK-RGV-RHLYR-E-P----SQV---TQKYFAIFDAVNSQN--  211 (315)
T ss_dssp             EECC-SHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHH-HTE-EEEES-S-G----GGC---CSCEEEEECC-------
T ss_pred             EECC-CHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHH-cCC-CEEEc-C-H----HHh---CCCccEEEECCCchh--
Confidence            5788 9999988876666644 888888 7777665533 321 211 1 1 1    111   348999999998631  


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                              ++..+..++++|+++.++..
T Consensus       212 ------------------------~~~~~~~l~~~G~~v~~g~~  231 (315)
T 3goh_A          212 ------------------------AAALVPSLKANGHIICIQDR  231 (315)
T ss_dssp             --------------------------TTGGGEEEEEEEEEECCC
T ss_pred             ------------------------HHHHHHHhcCCCEEEEEeCC
Confidence                                    12235567888999998643

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=92.17  E-value=0.82  Score=37.05  Aligned_cols=36  Identities=8%  Similarity=-0.068  Sum_probs=29.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK   40 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~   40 (230)
                      |+|-+|.+++..|++. +..|++.+++++.++...+.
T Consensus        11 GaG~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A           11 GTGVLGSQIAFQTAFH-GFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHH
Confidence            4588999999999999 56899999998877665443

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=92.12  E-value=0.25  Score=40.89  Aligned_cols=106  Identities=21%  Similarity=0.205  Sum_probs=62.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc------c--CCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL------D--ILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~------D--~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+|+ |.+|..++..|+..+...|++.++++++++....++..+      +  ++.-.+        .+.+..-|+||..
T Consensus         4 IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d--------~~a~~~aD~Vi~~   74 (308)
T 2d4a_B            4 ILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS--------YEDMRGSDIVLVT   74 (308)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC--------GGGGTTCSEEEEC
T ss_pred             EECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC--------HHHhCCCCEEEEe
Confidence            5687 999999999999885546999999988877655444331      1  111001        0124579999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      +|.... +  ..+-   ...+..|..-...+++.+.++ .+.+.+|++|-
T Consensus        75 ag~~~k-~--G~~r---~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tN  117 (308)
T 2d4a_B           75 AGIGRK-P--GMTR---EQLLEANANTMADLAEKIKAY-AKDAIVVITTN  117 (308)
T ss_dssp             CSCCCC-S--SCCT---HHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCS
T ss_pred             CCCCCC-C--CCcH---HHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCC
Confidence            998532 1  1221   233444444444444444333 24567777653

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=91.89  E-value=0.095  Score=41.27  Aligned_cols=65  Identities=9%  Similarity=0.050  Sum_probs=46.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh--hhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK--LQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~--~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |.|+ |.+|..+++.|.++| . |++++++++..+.....  +..+|.++++.++++      ...+.|.+|.+.+
T Consensus        14 I~G~-G~~G~~la~~L~~~g-~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~~   80 (234)
T 2aef_A           14 ICGW-SESTLECLRELRGSE-V-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKA------NVRGARAVIVDLE   80 (234)
T ss_dssp             EESC-CHHHHHHHHHSTTSE-E-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHT------TCTTCSEEEECCS
T ss_pred             EECC-ChHHHHHHHHHHhCC-e-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhc------CcchhcEEEEcCC
Confidence            4565 899999999999985 4 88888888877655422  223799988776554      1237888887664

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=91.84  E-value=0.71  Score=37.36  Aligned_cols=37  Identities=11%  Similarity=0.105  Sum_probs=30.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL   38 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~   38 (230)
                      |.|++|-+|.++++.|++. +..|++.+|++++.+...
T Consensus        16 iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           16 ILGAGGKMGARITRKIHDS-AHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             EETTTSHHHHHHHHHHHHS-SSEEEEECCSHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHH
Confidence            3577799999999999998 468888999887766553

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=91.75  E-value=0.2  Score=42.83  Aligned_cols=109  Identities=13%  Similarity=0.088  Sum_probs=60.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++.+. ++..  +|..+.+.+.+.+.++.. -.++|++|.++|....
T Consensus       191 V~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~i~~~~~~~~~~~~~~~~~-g~g~Dvvid~~g~~~~  267 (398)
T 2dph_A          191 IAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DAGFETIDLRNSAPLRDQIDQILG-KPEVDCGVDAVGFEAH  267 (398)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TTTCEEEETTSSSCHHHHHHHHHS-SSCEEEEEECSCTTCB
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCcEEcCCCcchHHHHHHHHhC-CCCCCEEEECCCCccc
Confidence            4675 999998887666675558999999888776543 3321  454443321222222221 1269999999986310


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                          ....+..       ...+-..++..+..++++|+++.++..
T Consensus       268 ----~~~~~~~-------~~~~~~~~~~~~~~l~~gG~iv~~G~~  301 (398)
T 2dph_A          268 ----GLGDEAN-------TETPNGALNSLFDVVRAGGAIGIPGIY  301 (398)
T ss_dssp             ----CSGGGTT-------SBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred             ----ccccccc-------ccccHHHHHHHHHHHhcCCEEEEeccc
Confidence                0000000       000001233445566888999988754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=91.62  E-value=0.54  Score=38.53  Aligned_cols=72  Identities=15%  Similarity=0.052  Sum_probs=46.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccC----CCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDI----LDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~----s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.||.|-||.+++..|.+.| ..|++.+|++..-  ..+.+..+|+    ..+..+..+++++.....+=.+|++.++.
T Consensus        26 iIGg~G~mG~~la~~l~~~G-~~V~~~~~~~~~~--~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~~~~sv  101 (298)
T 2pv7_A           26 IVGGYGKLGGLFARYLRASG-YPISILDREDWAV--AESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLTSV  101 (298)
T ss_dssp             EETTTSHHHHHHHHHHHTTT-CCEEEECTTCGGG--HHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCSC
T ss_pred             EEcCCCHHHHHHHHHHHhCC-CeEEEEECCcccC--HHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCCCcEEEECCCC
Confidence            35679999999999999984 5777888876531  1122334443    34556788888876544332355655554

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=91.56  E-value=0.29  Score=51.58  Aligned_cols=69  Identities=16%  Similarity=0.273  Sum_probs=45.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhc--CCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEH--GGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~--~~id~lv~~   72 (230)
                      |.||+||+|.+.+...... +..|+.+.+++++.+...+.+..      +|.++.+-.    +++.+..  .++|++|++
T Consensus      1673 I~gaaGgVG~aAiqlAk~~-Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~----~~i~~~t~g~GvDvVld~ 1747 (2512)
T 2vz8_A         1673 IHSGSGGVGQAAIAIALSR-GCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFE----QHVLRHTAGKGVDLVLNS 1747 (2512)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHH----HHHHHTTTSCCEEEEEEC
T ss_pred             EEeCChHHHHHHHHHHHHc-CCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHH----HHHHHhcCCCCceEEEEC
Confidence            5799999999887755555 56888888888777766654311      344544333    3333322  269999998


Q ss_pred             cC
Q psy7994          73 AA   74 (230)
Q Consensus        73 ag   74 (230)
                      .|
T Consensus      1748 ~g 1749 (2512)
T 2vz8_A         1748 LA 1749 (2512)
T ss_dssp             CC
T ss_pred             CC
Confidence            76

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=91.42  E-value=0.24  Score=40.93  Aligned_cols=110  Identities=15%  Similarity=0.132  Sum_probs=56.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccC-CCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDI-LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~-s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |.|+ |.+|..++..|+..|. ..|++.++++++++.....+..+.. .....+..  .. .+.+..-|+||.++|....
T Consensus         5 VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~-~~a~~~aDvVIi~~~~~~~   80 (304)
T 2v6b_A            5 VVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GG-HSELADAQVVILTAGANQK   80 (304)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--EC-GGGGTTCSEEEECC-----
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CC-HHHhCCCCEEEEcCCCCCC
Confidence            4676 9999999999999843 2799999998777654444433210 00000000  00 1224578999999987431


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      .   .   ..-.+.+..|+.-...+++.+.++ .+++.+|++|
T Consensus        81 ~---g---~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~t  116 (304)
T 2v6b_A           81 P---G---ESRLDLLEKNADIFRELVPQITRA-APDAVLLVTS  116 (304)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECS
T ss_pred             C---C---CcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence            0   0   111223444444444444444443 2445555443

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=91.35  E-value=0.46  Score=39.38  Aligned_cols=28  Identities=11%  Similarity=-0.109  Sum_probs=24.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDA   31 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~   31 (230)
                      |.|-+|.+++..|++.|.+.|++.+|++
T Consensus        31 G~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           31 GFGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            4688999999999999427888999987

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=91.24  E-value=0.71  Score=37.55  Aligned_cols=73  Identities=12%  Similarity=0.169  Sum_probs=50.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEE-EecCcc---------------------hhHHHHHhhhc-ccCCCHHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYL-TARDAS---------------------RGQEALEKLQK-LDILDKNSIKALHD   57 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~-~~r~~~---------------------~~~~~~~~~~~-~D~s~~~~v~~~~~   57 (230)
                      |+|++|.+|+.+++.+.++....++. ++++.+                     .+++..+...- +|++.++.+...+.
T Consensus        12 V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p~a~~~~~~   91 (272)
T 4f3y_A           12 IAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPEGTLVHLD   91 (272)
T ss_dssp             ESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCHHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCHHHHHHHHH
Confidence            57999999999999999875555544 566532                     22332222111 68899998888888


Q ss_pred             HHHhhcCCCcEEEEccCC
Q psy7994          58 HLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus        58 ~~~~~~~~id~lv~~ag~   75 (230)
                      .+.+.  ++.+|+-+.|+
T Consensus        92 ~al~~--G~~vVigTTG~  107 (272)
T 4f3y_A           92 AALRH--DVKLVIGTTGF  107 (272)
T ss_dssp             HHHHH--TCEEEECCCCC
T ss_pred             HHHHc--CCCEEEECCCC
Confidence            77665  78888877775

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=91.02  E-value=1.5  Score=34.80  Aligned_cols=72  Identities=14%  Similarity=0.194  Sum_probs=48.9

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------------cccC----CCHHHHHHHHHHHHhhcCCCcE
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------------KLDI----LDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------------~~D~----s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      .|.+|..++..|++.|...|.+.+|++++.+...+.+.            .+|+    ..+..+..+++++.....+=.+
T Consensus        18 ~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~i   97 (266)
T 3d1l_A           18 AGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEAL   97 (266)
T ss_dssp             CSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCE
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcE
Confidence            48999999999999965448889999888776654321            1232    3455667788777654433346


Q ss_pred             EEEccCCc
Q psy7994          69 LVNNAAIA   76 (230)
Q Consensus        69 lv~~ag~~   76 (230)
                      +|++.+..
T Consensus        98 vv~~s~~~  105 (266)
T 3d1l_A           98 MVHTAGSI  105 (266)
T ss_dssp             EEECCTTS
T ss_pred             EEECCCCC
Confidence            77777653

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=90.97  E-value=0.91  Score=40.08  Aligned_cols=67  Identities=9%  Similarity=0.102  Sum_probs=42.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|-+|..++..|++. ++.|++.+|++++.+...+.- ....+.-..+++++++.    ....|+||.+...
T Consensus        11 GlG~MG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~----l~~aDvVil~Vp~   78 (484)
T 4gwg_A           11 GLAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSK----LKKPRRIILLVKA   78 (484)
T ss_dssp             CCSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHT----BCSSCEEEECSCS
T ss_pred             ChhHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhh----ccCCCEEEEecCC
Confidence            4688999999999999 568889999998887765531 11112111223333332    2356777766554

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=90.96  E-value=1.1  Score=37.21  Aligned_cols=73  Identities=19%  Similarity=0.070  Sum_probs=45.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhccc-CCC-HHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLD-ILD-KNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D-~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+|+ |.+|.+++..|+..+. ..|++.++++++++.....+.... ... .-.+..  . -.+.+..-|+||.++|...
T Consensus        11 IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~--~-~~~al~~aDvViia~~~~~   86 (316)
T 1ldn_A           11 VIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH--G-DYDDCRDADLVVICAGANQ   86 (316)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE--C-CGGGTTTCSEEEECCSCCC
T ss_pred             EECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc--C-cHHHhCCCCEEEEcCCCCC
Confidence            5677 9999999999998753 479999998876655444443211 000 000000  0 0122457999999999854

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=90.87  E-value=0.33  Score=39.01  Aligned_cols=59  Identities=17%  Similarity=0.183  Sum_probs=42.4

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      .|++|+++++.|.+.|. .|.+.+|+.++.+...+.+.. ...+.          .+. ...|+||++....
T Consensus       124 ~G~~g~~~a~~l~~~g~-~v~v~~r~~~~~~~l~~~~~~-~~~~~----------~~~-~~~Divi~~tp~~  182 (263)
T 2d5c_A          124 AGGAGRAVAFALREAGL-EVWVWNRTPQRALALAEEFGL-RAVPL----------EKA-REARLLVNATRVG  182 (263)
T ss_dssp             CSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHHTC-EECCG----------GGG-GGCSEEEECSSTT
T ss_pred             CcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcc-chhhH----------hhc-cCCCEEEEccCCC
Confidence            58899999999999965 899999998877766655432 11111          111 3689999999875

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=90.73  E-value=0.59  Score=39.00  Aligned_cols=67  Identities=24%  Similarity=0.198  Sum_probs=44.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc--------cCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL--------DILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~--------D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.|+ |.+|.+++..|+..|...|++.+++++.++.....+...        .++--.+       . +.+..-|+||.+
T Consensus        19 ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d-------~-~al~~aD~VI~a   89 (328)
T 2hjr_A           19 IIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENN-------Y-EYLQNSDVVIIT   89 (328)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC-------G-GGGTTCSEEEEC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCC-------H-HHHCCCCEEEEc
Confidence            4676 999999999999986536999999988777543333221        0110000       1 123478999999


Q ss_pred             cCCc
Q psy7994          73 AAIA   76 (230)
Q Consensus        73 ag~~   76 (230)
                      +|..
T Consensus        90 vg~p   93 (328)
T 2hjr_A           90 AGVP   93 (328)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9875

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=90.61  E-value=1.1  Score=37.01  Aligned_cols=64  Identities=22%  Similarity=0.235  Sum_probs=43.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhc-------ccC--CCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQK-------LDI--LDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~-------~D~--s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      |.|+ |.+|.+++..|+..|. ..|++.++++++++.....+..       ..+  ++.           +.+...|+||
T Consensus         5 VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~-----------~~~~~aDvVi   72 (319)
T 1a5z_A            5 IVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-----------ADLKGSDVVI   72 (319)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-----------GGGTTCSEEE
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCH-----------HHhCCCCEEE
Confidence            4566 9999999999999843 2799999998777665443321       111  111           1134789999


Q ss_pred             EccCCc
Q psy7994          71 NNAAIA   76 (230)
Q Consensus        71 ~~ag~~   76 (230)
                      .+++..
T Consensus        73 iav~~~   78 (319)
T 1a5z_A           73 VAAGVP   78 (319)
T ss_dssp             ECCCCC
T ss_pred             EccCCC
Confidence            999875

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=90.47  E-value=0.46  Score=39.34  Aligned_cols=68  Identities=19%  Similarity=0.150  Sum_probs=43.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc--------cCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL--------DILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~--------D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.|+ |.+|.+++..|+..|...|++.+++++.++.....+...        .++...+       . +.+...|+||.+
T Consensus         9 VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d-------~-~a~~~aDiVi~a   79 (317)
T 2ewd_A            9 VIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDD-------Y-ADISGSDVVIIT   79 (317)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESC-------G-GGGTTCSEEEEC
T ss_pred             EECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCC-------H-HHhCCCCEEEEe
Confidence            4566 899999999999996547999999988776532222110        1100000       1 123478999999


Q ss_pred             cCCcc
Q psy7994          73 AAIAF   77 (230)
Q Consensus        73 ag~~~   77 (230)
                      +|...
T Consensus        80 vg~p~   84 (317)
T 2ewd_A           80 ASIPG   84 (317)
T ss_dssp             CCCSS
T ss_pred             CCCCC
Confidence            99753

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=90.34  E-value=0.93  Score=38.11  Aligned_cols=28  Identities=14%  Similarity=0.084  Sum_probs=25.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDA   31 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~   31 (230)
                      |.||+|.++++.|+..|...+.+++++.
T Consensus        41 GaGGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           41 GAGTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            6799999999999999988999988765

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=90.30  E-value=1.1  Score=36.17  Aligned_cols=71  Identities=11%  Similarity=0.149  Sum_probs=48.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-----------hhccc-----CCCHHHHHHHH---HHHHhhcC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-----------LQKLD-----ILDKNSIKALH---DHLEAEHG   64 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-----------~~~~D-----~s~~~~v~~~~---~~~~~~~~   64 (230)
                      |.|.+|..++..|++. ++.|++.+|++++.+...+.           +..+|     +.+...++.++   +++.....
T Consensus         8 G~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~   86 (287)
T 3pef_A            8 GLGIMGSAMAKNLVKA-GCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIG   86 (287)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCC
T ss_pred             eecHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCC
Confidence            4689999999999999 56888999999887765431           11233     34456777777   66655544


Q ss_pred             CCcEEEEccCC
Q psy7994          65 GVDVLVNNAAI   75 (230)
Q Consensus        65 ~id~lv~~ag~   75 (230)
                      +=.++|++.+.
T Consensus        87 ~~~~vi~~st~   97 (287)
T 3pef_A           87 EGRGYVDMSTV   97 (287)
T ss_dssp             TTCEEEECSCC
T ss_pred             CCCEEEeCCCC
Confidence            44567766544

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=90.04  E-value=1.9  Score=29.81  Aligned_cols=66  Identities=24%  Similarity=0.281  Sum_probs=46.8

Q ss_pred             CcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhhhc--ccC---CCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           6 KGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKLQK--LDI---LDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         6 ~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~~~--~D~---s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      .-|=+.+++++..+|-..|++.+...+ +..+.++++..  .|+   -|.++.+.-+.++.++++.+|+++.
T Consensus        12 peilkeivreikrqgvrvvllysdqdekrrrerleefekqgvdvrtvedkedfrenireiwerypqldvvvi   83 (162)
T 2l82_A           12 PEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVI   83 (162)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred             HHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEE
Confidence            346678999999996655555554333 33445566654  454   5788889999999999999999874

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=89.91  E-value=0.5  Score=41.31  Aligned_cols=35  Identities=6%  Similarity=-0.037  Sum_probs=30.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE   39 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~   39 (230)
                      |.|.+|..++..|++. ++.|++.++++++.+...+
T Consensus         9 G~G~vG~~lA~~La~~-G~~V~~~D~~~~~v~~l~~   43 (450)
T 3gg2_A            9 GIGYVGLVSATCFAEL-GANVRCIDTDRNKIEQLNS   43 (450)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHc
Confidence            4689999999999999 5689999999988777655

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=89.80  E-value=1.4  Score=36.17  Aligned_cols=35  Identities=9%  Similarity=0.104  Sum_probs=28.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEec--CcchhHHHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTAR--DASRGQEALE   39 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r--~~~~~~~~~~   39 (230)
                      |.|.+|..++..|++. ++.|.+.+|  ++++.+...+
T Consensus         7 G~G~mG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~   43 (335)
T 1txg_A            7 GAGAMGSALSVPLVDN-GNEVRIWGTEFDTEILKSISA   43 (335)
T ss_dssp             SCCHHHHHHHHHHHHH-CCEEEEECCGGGHHHHHHHHT
T ss_pred             CcCHHHHHHHHHHHhC-CCeEEEEEccCCHHHHHHHHH
Confidence            4589999999999998 568888888  7776665544

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=89.77  E-value=2.3  Score=36.53  Aligned_cols=101  Identities=12%  Similarity=0.093  Sum_probs=58.9

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccC------------------CCHHHHHHHHHHHHh
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDI------------------LDKNSIKALHDHLEA   61 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~------------------s~~~~v~~~~~~~~~   61 (230)
                      .|+ |.+|..+++.+...| ..|++.++++.+++...+ +..  +++                  +++ ....-...+.+
T Consensus       196 iG~-G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~-~~~~~~~~l~e  271 (405)
T 4dio_A          196 MGA-GVAGLQAIATARRLG-AVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGE-YQVKQAALVAE  271 (405)
T ss_dssp             ECC-SHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CH-HHHHHHHHHHH
T ss_pred             ECC-cHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchh-hhhhhHhHHHH
Confidence            344 799999999999985 588999999988776644 211  111                  111 00011112222


Q ss_pred             hcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          62 EHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        62 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      .....|+||.++.......                   +.++.+..+..|+++..||.++...|
T Consensus       272 ~l~~aDVVI~tvlipg~~a-------------------p~Lvt~emv~~Mk~GsVIVDvA~d~G  316 (405)
T 4dio_A          272 HIAKQDIVITTALIPGRPA-------------------PRLVTREMLDSMKPGSVVVDLAVERG  316 (405)
T ss_dssp             HHHTCSEEEECCCCSSSCC-------------------CCCBCHHHHTTSCTTCEEEETTGGGT
T ss_pred             HhcCCCEEEECCcCCCCCC-------------------CEEecHHHHhcCCCCCEEEEEeCCCC
Confidence            2237999999887542111                   11112345566787788888886444

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=89.55  E-value=0.53  Score=40.64  Aligned_cols=66  Identities=12%  Similarity=0.045  Sum_probs=43.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh---hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL---QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~---~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |.|. |-+|..+++.|.++ +..|++++++++..+.....-   ..+|.++++.++++      ...+.|+||.+.+
T Consensus         9 IiG~-Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~a------gi~~A~~viv~~~   77 (413)
T 3l9w_A            9 IAGF-GRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESA------GAAKAEVLINAID   77 (413)
T ss_dssp             EECC-SHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHT------TTTTCSEEEECCS
T ss_pred             EECC-CHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhc------CCCccCEEEECCC
Confidence            3454 77999999999998 568888899988877654321   12577776665544      1125566665554

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=89.53  E-value=1.5  Score=38.29  Aligned_cols=35  Identities=9%  Similarity=-0.047  Sum_probs=30.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE   39 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~   39 (230)
                      |.|.+|..+|..|++. ++.|++.++++++.+...+
T Consensus        15 GlG~vG~~~A~~La~~-G~~V~~~D~~~~kv~~l~~   49 (446)
T 4a7p_A           15 GTGYVGLVSGACFSDF-GHEVVCVDKDARKIELLHQ   49 (446)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHTT
T ss_pred             cCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHhc
Confidence            5688999999999999 6799999999998876654

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=89.41  E-value=1.1  Score=39.60  Aligned_cols=85  Identities=15%  Similarity=0.169  Sum_probs=54.7

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCC
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNS   81 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~   81 (230)
                      .| .|.||..+++.+...| ..|+.+++++.+++...+.  .+|+.+.+   +++       ...|+||.+.|...   +
T Consensus       280 iG-~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~--Ga~~~~l~---e~l-------~~aDvVi~atgt~~---~  342 (494)
T 3ce6_A          280 CG-YGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMME--GFDVVTVE---EAI-------GDADIVVTATGNKD---I  342 (494)
T ss_dssp             EC-CSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT--TCEECCHH---HHG-------GGCSEEEECSSSSC---S
T ss_pred             Ec-cCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc--CCEEecHH---HHH-------hCCCEEEECCCCHH---H
Confidence            45 4999999999999885 5899999988876554322  23444432   221       36899999876421   0


Q ss_pred             CCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          82 SEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        82 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                        ..                   +..++.|++++.+++++...
T Consensus       343 --i~-------------------~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          343 --IM-------------------LEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             --BC-------------------HHHHHHSCTTCEEEECSSSG
T ss_pred             --HH-------------------HHHHHhcCCCcEEEEeCCCC
Confidence              01                   12233457788888888654

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=89.40  E-value=0.24  Score=38.55  Aligned_cols=60  Identities=8%  Similarity=0.067  Sum_probs=39.8

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      .| +|.+|.++++.|++.| ..|++.+|++++.+...+.  .+.+.   +.+++       ....|+||.+...
T Consensus        34 iG-~G~~G~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~--g~~~~---~~~~~-------~~~~DvVi~av~~   93 (215)
T 2vns_A           34 LG-SGDFARSLATRLVGSG-FKVVVGSRNPKRTARLFPS--AAQVT---FQEEA-------VSSPEVIFVAVFR   93 (215)
T ss_dssp             EC-CSHHHHHHHHHHHHTT-CCEEEEESSHHHHHHHSBT--TSEEE---EHHHH-------TTSCSEEEECSCG
T ss_pred             Ec-cCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc--CCcee---cHHHH-------HhCCCEEEECCCh
Confidence            45 7999999999999984 5788889988766544321  12221   22222       2368999988763

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=89.09  E-value=1.2  Score=40.45  Aligned_cols=28  Identities=14%  Similarity=0.084  Sum_probs=25.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDA   31 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~   31 (230)
                      |.||+|.++++.|+..|...+.+++.+.
T Consensus       333 GaGGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          333 GAGTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            6799999999999999988999988865

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=89.05  E-value=1.7  Score=38.17  Aligned_cols=36  Identities=8%  Similarity=0.170  Sum_probs=30.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK   40 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~   40 (230)
                      |.|-+|.+++..|++. +..|.+.+|++++.+...+.
T Consensus        22 GlG~MG~~lA~~La~~-G~~V~v~~r~~~~~~~l~~~   57 (480)
T 2zyd_A           22 GMAVMGRNLALNIESR-GYTVSIFNRSREKTEEVIAE   57 (480)
T ss_dssp             CCSHHHHHHHHHHHTT-TCCEEEECSSHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhh
Confidence            5688999999999998 56788999999888776654

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=88.99  E-value=0.86  Score=39.49  Aligned_cols=35  Identities=6%  Similarity=-0.140  Sum_probs=29.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE   39 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~   39 (230)
                      |.|.+|..++..|++. ++.|++.++++++.+...+
T Consensus         7 G~G~vG~~~A~~la~~-G~~V~~~d~~~~~~~~l~~   41 (436)
T 1mv8_A            7 GLGYVGAVCAGCLSAR-GHEVIGVDVSSTKIDLINQ   41 (436)
T ss_dssp             CCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHhC
Confidence            4799999999999999 5688899999888776654

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=88.77  E-value=0.41  Score=38.90  Aligned_cols=61  Identities=20%  Similarity=0.244  Sum_probs=46.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+||.|++++..|.+.|...|.+.+|+.++.+...+.+.. ++.+  ..        . ....|+|||+....
T Consensus       126 GaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~-~~~~--~~--------~-~~~~DivInaTp~g  186 (271)
T 1npy_A          126 GSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY-AYIN--SL--------E-NQQADILVNVTSIG  186 (271)
T ss_dssp             CSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC-EEES--CC--------T-TCCCSEEEECSSTT
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC-ccch--hh--------h-cccCCEEEECCCCC
Confidence            5789999999999999777999999999988887776532 2211  00        0 13689999998865

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=88.76  E-value=1.4  Score=36.16  Aligned_cols=71  Identities=11%  Similarity=0.103  Sum_probs=46.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-----------hhccc-----CCCHHHHHHHH---HHHHhhcC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-----------LQKLD-----ILDKNSIKALH---DHLEAEHG   64 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-----------~~~~D-----~s~~~~v~~~~---~~~~~~~~   64 (230)
                      |.|-+|..++..|++. ++.|++.+|++++.+...+.           +..+|     +.++..++.++   +++.....
T Consensus        28 G~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~  106 (310)
T 3doj_A           28 GLGIMGKAMSMNLLKN-GFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQIC  106 (310)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCC
T ss_pred             CccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccC
Confidence            4688999999999999 56888999999887765431           11133     33555666666   44444433


Q ss_pred             CCcEEEEccCC
Q psy7994          65 GVDVLVNNAAI   75 (230)
Q Consensus        65 ~id~lv~~ag~   75 (230)
                      +=.++|++...
T Consensus       107 ~g~~vv~~st~  117 (310)
T 3doj_A          107 EGKGYIDMSTV  117 (310)
T ss_dssp             TTCEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            44566666543

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=88.58  E-value=0.62  Score=38.51  Aligned_cols=63  Identities=13%  Similarity=0.121  Sum_probs=44.4

Q ss_pred             CCCcHHHHHHHHHHHh-cCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           4 ANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         4 ~s~giG~~~a~~la~~-g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |+|.+|..+++.|++. |...|.+.+|++++.+...+.+.. ++.-.++.+++++       ..|+||.+..
T Consensus       142 G~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~-~~~~~~~~~e~v~-------~aDiVi~atp  205 (312)
T 2i99_A          142 GAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG-EVRVCSSVQEAVA-------GADVIITVTL  205 (312)
T ss_dssp             CCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSS-CCEECSSHHHHHT-------TCSEEEECCC
T ss_pred             CCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhC-CeEEeCCHHHHHh-------cCCEEEEEeC
Confidence            5689999999999887 566899999999988887766531 1211123333432       5799998865

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=88.46  E-value=0.25  Score=40.83  Aligned_cols=65  Identities=18%  Similarity=0.179  Sum_probs=45.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhc--------ccC--CCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQK--------LDI--LDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~--------~D~--s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      |.| +|.+|..++..|++.|. ..|++.++++++++.....+..        ..+  ++.           +.....|++
T Consensus         6 VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-----------~~~~~aDvV   73 (309)
T 1hyh_A            6 IIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-----------AALADADVV   73 (309)
T ss_dssp             EEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-----------GGGTTCSEE
T ss_pred             EEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-----------HHhCCCCEE
Confidence            345 79999999999999853 6899999998877766544331        111  111           123478999


Q ss_pred             EEccCCcc
Q psy7994          70 VNNAAIAF   77 (230)
Q Consensus        70 v~~ag~~~   77 (230)
                      |.+++...
T Consensus        74 iiav~~~~   81 (309)
T 1hyh_A           74 ISTLGNIK   81 (309)
T ss_dssp             EECCSCGG
T ss_pred             EEecCCcc
Confidence            99998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	230
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-47
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	3e-27
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	8e-26
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-23
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	6e-23
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	5e-22
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-21
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	4e-21
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-20
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-20
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	5e-20
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	5e-20
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	7e-20
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	8e-20
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	5e-19
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-18
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	8e-18
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-17
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-17
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	4e-17
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-17
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-16
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-16
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-16
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-16
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-16
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-16
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	9e-16
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-15
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-15
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-15
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-15
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-14
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-14
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-14
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-14
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-14
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-14
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	5e-14
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-14
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	9e-14
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-13
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-13
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-13
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-12
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-12
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-12
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-12
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-12
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-11
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-11
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-11
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-11
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-11
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-10
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-10
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-09
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	4e-06
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-06
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	9e-06
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-04
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.001
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	0.003

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (391), Expect = 4e-47
 Identities = 111/237 (46%), Positives = 144/237 (60%), Gaps = 10/237 (4%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG NKGIG  IV+ L + F G + LTARD +RGQ A+++LQ          LDI D  S
Sbjct: 8   VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 67

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL D L  E+GG+DVLVNNA IAFKV    PF  QA  TM+TN+F   DVC  L PL+
Sbjct: 68  IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 127

Query: 112 RSHGRVVNVSSSCGHLCHVT-SEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +  GRVVNVSS        + S  L++K   E  + EEL  LMN+FVE  + G H K GW
Sbjct: 128 KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGW 187

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           P+SAY  TK+GVT LS +    LS+    + +++N   PG+V TDM+  K   + ++
Sbjct: 188 PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEE 244

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  102 bits (255), Expect = 3e-27
 Identities = 48/237 (20%), Positives = 86/237 (36%), Gaps = 34/237 (14%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIK 53
           VTGAN+GIG G+V+ L++      I  TARD  +  E             L +    S+ 
Sbjct: 8   VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLD 67

Query: 54  ALHDHLEAEHG--GVDVLVNNAAIAFKVNS-SEPFGSQALHTMRTNYFALIDVCDILFPL 110
                +    G  G+ +L+NNA +     + +EP  +     +  N  +++ +   L PL
Sbjct: 68  TFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPL 127

Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           L++     +          V +                    ++  +    D +     +
Sbjct: 128 LKNAASKESGDQLSVSRAAVIT--------------------ISSGLGSITDNTSGSAQF 167

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           P  AY  +K  +          L  D +     V    PG+V T++      LT++Q
Sbjct: 168 PVLAYRMSKAAINMFGRTLAVDLKDDNVL----VVNFCPGWVQTNLGGKNAALTVEQ 220

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.8 bits (246), Expect = 8e-26
 Identities = 46/236 (19%), Positives = 77/236 (32%), Gaps = 60/236 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDK 49
           VTGA+ GIG  + + L+QQ    +   AR     +E   + +           + D+ ++
Sbjct: 15  VTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 73

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
             I ++   + ++H GVD+ +NNA +A          S        N  AL       + 
Sbjct: 74  EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQ 133

Query: 110 LLR----SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
            ++      G ++N++S  GH                                       
Sbjct: 134 SMKERNVDDGHIININSMSGH--------------------------------------R 155

Query: 166 TKGGWPNSAYAATKLGV--TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                    Y+ATK  V        Q    +Q  IR      C+ PG V T  +  
Sbjct: 156 VLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIR----ATCISPGVVETQFAFK 207

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (229), Expect = 2e-23
 Identities = 43/230 (18%), Positives = 71/230 (30%), Gaps = 59/230 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           +TGA  GIG        +     + L   +    +E   K +          +D  ++  
Sbjct: 12  ITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRED 70

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I +    ++AE G V +LVNNA + +  +       Q   T   N  A         P +
Sbjct: 71  IYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAM 130

Query: 112 --RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
              +HG +V V+S+ GH                                           
Sbjct: 131 TKNNHGHIVTVASAAGH----------------------------------------VSV 150

Query: 170 WPNSAYAATKLGV---TKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               AY ++K       K    + A L    ++      C+ P +VNT  
Sbjct: 151 PFLLAYCSSKFAAVGFHKTLTDELAALQITGVK----TTCLCPNFVNTGF 196

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 91.6 bits (227), Expect = 6e-23
 Identities = 45/237 (18%), Positives = 79/237 (33%), Gaps = 59/237 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDILD 48
           +TG++ GIG        ++    + +T R A R +E  +++               D+  
Sbjct: 10  ITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 68

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVC 104
                 +      + G +D+LVNNA  A   + S+   +Q++     T+  N  ++I + 
Sbjct: 69  DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALT 128

Query: 105 DILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
               P L S           G + +++S A                             S
Sbjct: 129 KKAVPHLSSTK---------GEIVNISSIA-----------------------------S 150

Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG 221
                     Y+  K  + + +      L Q  IR    VN + PG V T   S  G
Sbjct: 151 GLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR----VNSISPGLVATGFGSAMG 203

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 88.4 bits (219), Expect = 5e-22
 Identities = 50/234 (21%), Positives = 82/234 (35%), Gaps = 48/234 (20%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----KLDILDKNSIKALH 56
           VTG  +GIG  I +   ++   ++ L       G+E  E +     ++D+ D+       
Sbjct: 10  VTGGARGIGRAIAQAFARE-GALVALCDLRPE-GKEVAEAIGGAFFQVDLEDERERVRFV 67

Query: 57  DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGR 116
           +      G VDVLVNNAAIA   ++      +    +  N  A + +  +    +R  G 
Sbjct: 68  EEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG- 126

Query: 117 VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYA 176
                   G + +V S                                       N+AY 
Sbjct: 127 -------GGAIVNVAS------------------------------VQGLFAEQENAAYN 149

Query: 177 ATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI 230
           A+K G+  L+      L+   IR    VN V PG + T+       L+ D +  
Sbjct: 150 ASKGGLVNLTRSLALDLAPLRIR----VNAVAPGAIATEAVLEAIALSPDPERT 199

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 86.6 bits (214), Expect = 3e-21
 Identities = 47/229 (20%), Positives = 76/229 (33%), Gaps = 58/229 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           +TG   GIG  I    +++    + +T R +  G++A + +         + D  D++  
Sbjct: 11  ITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGW 69

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL- 111
             L D  E   G V  LVNNA IA   +  E   ++    +  N   +     +    + 
Sbjct: 70  TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMK 129

Query: 112 --RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
                  ++N+SS  G                                          G 
Sbjct: 130 NKGLGASIINMSSIEGF----------------------------------------VGD 149

Query: 170 WPNSAYAATKLGVTKLSFL--QHALLSQDAIREDLVVNCVHPGYVNTDM 216
               AY A+K  V  +S        L    +R    VN VHPGY+ T +
Sbjct: 150 PSLGAYNASKGAVRIMSKSAALDCALKDYDVR----VNTVHPGYIKTPL 194

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.5 bits (214), Expect = 4e-21
 Identities = 50/223 (22%), Positives = 77/223 (34%), Gaps = 52/223 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKAL 55
           VTG  +GIG GIV+  +      + +  +D S G+   ++L        D+  ++ +K L
Sbjct: 11  VTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTL 69

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPLLR-S 113
                   G +D +VNNA         E   +Q     +  N      +  +  P LR S
Sbjct: 70  VSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS 129

Query: 114 HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS 173
            G V+N+SS  G                                          G     
Sbjct: 130 QGNVINISSLVGA----------------------------------------IGQAQAV 149

Query: 174 AYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            Y ATK  VT ++       S   +R    VNC+ PG + T +
Sbjct: 150 PYVATKGAVTAMTKALALDESPYGVR----VNCISPGNIWTPL 188

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 83.9 bits (207), Expect = 3e-20
 Identities = 39/223 (17%), Positives = 69/223 (30%), Gaps = 48/223 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----KLDILDKNSIKALH 56
           +TGA  GIG   ++   ++    +     +    +EA E +      +D+ D  S++   
Sbjct: 10  ITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGF 68

Query: 57  DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGR 116
               A  G +D +V+ A I       +         +R N      V       +R    
Sbjct: 69  AEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNP 128

Query: 117 VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYA 176
              V ++                                            G    + YA
Sbjct: 129 GSIVLTA---------------------------------------SRVYLGNLGQANYA 149

Query: 177 ATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
           A+  GV  L+      L +  IR    VN + PG++ T M++ 
Sbjct: 150 ASMAGVVGLTRTLALELGRWGIR----VNTLAPGFIETRMTAK 188

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 83.4 bits (206), Expect = 4e-20
 Identities = 41/230 (17%), Positives = 68/230 (29%), Gaps = 52/230 (22%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
           +TG   GIG  I +    +   I       A   + A+  L       K D+     ++A
Sbjct: 10  ITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEA 69

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCD--ILFPLLR 112
               + +  G  D+LVNNA I   +   E    Q   T   N  +   +    +      
Sbjct: 70  FGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 129

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
             GR++N++S+   L                                             
Sbjct: 130 GWGRIINLTSTTYWL----------------------------------------KIEAY 149

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
           + Y +TK      +    + L +D I     VN + P  V T  +     
Sbjct: 150 THYISTKAANIGFTRALASDLGKDGIT----VNAIAPSLVRTATTEASAL 195

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 83.5 bits (206), Expect = 5e-20
 Identities = 45/229 (19%), Positives = 74/229 (32%), Gaps = 53/229 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTG  KGIG+ IV+        +I+  AR+     E L K QK          D   +  
Sbjct: 13  VTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPE 71

Query: 52  IKALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            + L   + +  GG +D+L+NN        + +         + TN  +   +  +  PL
Sbjct: 72  REKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPL 131

Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           L++ G    +  S                                               
Sbjct: 132 LKASGCGNIIFMSSIA--------------------------------------GVVSAS 153

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
             S Y+ATK  + +L+       + D IR     N V P  + T ++  
Sbjct: 154 VGSIYSATKGALNQLARNLACEWASDGIR----ANAVAPAVIATPLAEA 198

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 83.6 bits (206), Expect = 5e-20
 Identities = 46/240 (19%), Positives = 80/240 (33%), Gaps = 51/240 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
           VTG N+GIG    + +       + +  R A+   E  EK+ K           D+ + +
Sbjct: 14  VTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTD 72

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            +      ++A+ G +  L+ NA ++    ++E            N F + + C  +  L
Sbjct: 73  IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL 132

Query: 111 ---LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
               +  G +V  SS    + +                                  S   
Sbjct: 133 WLQKQQKGSIVVTSSMSSQIINQ---------------------------------SSLN 159

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           G      Y ++K   + L     A  +   IR    VN + PGYVNTD ++       D 
Sbjct: 160 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIR----VNALSPGYVNTDQTAHMDKKIRDH 215

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 83.9 bits (207), Expect = 7e-20
 Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 60/232 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQ--------FDGIIYLTARDASRGQEALEKLQKL------DI 46
           VTGA  G+G        ++          G      + +S   + +E++++       + 
Sbjct: 12  VTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANY 71

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
               + + L        G +DV+VNNA I    + S           R +      V   
Sbjct: 72  DSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRA 131

Query: 107 LFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
            +  ++   +GR++  +S+ G                                       
Sbjct: 132 AWDHMKKQNYGRIIMTASASGI-------------------------------------- 153

Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
              G +  + Y+A KLG+  L+        ++ I      N + P   +   
Sbjct: 154 --YGNFGQANYSAAKLGLLGLANTLVIEGRKNNIH----CNTIAPNAGSRMT 199

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 82.7 bits (204), Expect = 8e-20
 Identities = 50/230 (21%), Positives = 78/230 (33%), Gaps = 53/230 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
           +TG  +G+G    +  +      + L       G     +L      Q LD+  +   + 
Sbjct: 10  ITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQR 68

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-- 112
           +  +   E G VD LVNNA I+  +        +    +  N   +      + P ++  
Sbjct: 69  VVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
             G +VN+SS+ G +                                             
Sbjct: 129 GGGSIVNISSAAGLMGL----------------------------------------ALT 148

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
           S+Y A+K GV  LS L    L  D IR    VN VHPG   T M++  G 
Sbjct: 149 SSYGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTYTPMTAETGI 194

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (199), Expect = 5e-19
 Identities = 42/232 (18%), Positives = 79/232 (34%), Gaps = 67/232 (28%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDK 49
           VTGA +GIG    + L+ +    + L   +   G +    L            + D+ D+
Sbjct: 8   VTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 66

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
             ++     +    G +D+LVNNA +  + N           T++ N  ++I    +   
Sbjct: 67  QQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWE--------KTLQINLVSVISGTYLGLD 118

Query: 110 LLRSH-----GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
            +        G ++N+SS  G                                       
Sbjct: 119 YMSKQNGGEGGIIINMSSLAGL-------------------------------------- 140

Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                     Y A+K G+    F + A L+ + +   + +N + PG+VNT +
Sbjct: 141 --MPVAQQPVYCASKHGIV--GFTRSAALAANLMNSGVRLNAICPGFVNTAI 188

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 78.9 bits (194), Expect = 2e-18
 Identities = 37/232 (15%), Positives = 64/232 (27%), Gaps = 45/232 (19%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA---LEKLQKLDILDKNSIKALHD 57
           VT      G G    L +     +        +  E     E   +L  + +     L +
Sbjct: 5   VTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIE 63

Query: 58  HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRV 117
            + + +G VDVLV+N   A       P           +Y   ++   I    L +    
Sbjct: 64  AVTSAYGQVDVLVSNDIFA-------PEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 118 VNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAA 177
                  GH+  +TS                                        S Y +
Sbjct: 117 QMKKRKSGHIIFITSAT------------------------------PFGPWKELSTYTS 146

Query: 178 TKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDN 229
            + G   L+      L +  I     V  + P Y++++ S    P    + N
Sbjct: 147 ARAGACTLANALSKELGEYNIP----VFAIGPNYLHSEDSPYFYPTEPWKTN 194

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 77.4 bits (190), Expect = 8e-18
 Identities = 51/229 (22%), Positives = 85/229 (37%), Gaps = 52/229 (22%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
           VTG ++G+G+GI +GL +     + + +R+     EA +KL +           D+ +  
Sbjct: 10  VTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 68

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            +K L + ++ + G +D +VN A I  +  + E    +    +  N F    VC   F L
Sbjct: 69  EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 128

Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           LR       ++     +  VT                                       
Sbjct: 129 LRESDNPSIINIGSLTVEEVT-------------------------------------MP 151

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
             SAYAA+K GV  L+        +  IR    VN + PG+  T M+  
Sbjct: 152 NISAYAASKGGVASLTKALAKEWGRYGIR----VNVIAPGWYRTKMTEA 196

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 77.0 bits (189), Expect = 1e-17
 Identities = 41/237 (17%), Positives = 80/237 (33%), Gaps = 50/237 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTG   G+G  +VK L+ +    +  +  + + GQ+   +L       + D+  +     
Sbjct: 11  VTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTL 69

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH 114
           +   ++   G ++VLVNNA I    +            ++ N  ++   C      ++  
Sbjct: 70  VMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET 129

Query: 115 -GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS 173
            G ++N++S    L                                       +     S
Sbjct: 130 GGSIINMASVSSWLPI-------------------------------------EQYAGYS 152

Query: 174 AYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI 230
           A  A    +T+ + L        AIR    VN +HP  + T M     P  + ++ +
Sbjct: 153 ASKAAVSALTRAAALSCR-KQGYAIR----VNSIHPDGIYTPMMQASLPKGVSKEMV 204

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 77.0 bits (189), Expect = 1e-17
 Identities = 45/226 (19%), Positives = 78/226 (34%), Gaps = 53/226 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG ++GIGYGIV+ L       +Y  +R+     + L + +           D+  ++ 
Sbjct: 13  VTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 71

Query: 52  IKALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
            + L + +     G +++LVNNA I     + +         M  N+ A   +  +  P 
Sbjct: 72  RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 131

Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           L++  R   V  S                                               
Sbjct: 132 LKASERGNVVFISSVSGAL--------------------------------------AVP 153

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             + Y ATK  + +L+       ++D IR    VN V PG + T +
Sbjct: 154 YEAVYGATKGAMDQLTRCLAFEWAKDNIR----VNGVGPGVIATSL 195

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 75.2 bits (184), Expect = 4e-17
 Identities = 47/233 (20%), Positives = 78/233 (33%), Gaps = 61/233 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQ------FDGIIYLTARDASRGQEALEKLQK---------LD 45
           +TGA KGIG  I     +       F+ ++ L++R A+  ++   + +           D
Sbjct: 6   ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITAD 65

Query: 46  ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCD 105
           I D   ++ L  H+   +G +D LVNNA +      S+       +TM TN      +  
Sbjct: 66  ISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQ 125

Query: 106 ILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDG 163
            LF L+  +  G +  ++S                                         
Sbjct: 126 ALFALMERQHSGHIFFITSVAAT------------------------------------- 148

Query: 164 SHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
              K    +S Y  +K G   L         +  +R    +  V PG V T M
Sbjct: 149 ---KAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR----ITDVQPGAVYTPM 194

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 75.8 bits (186), Expect = 4e-17
 Identities = 44/237 (18%), Positives = 81/237 (34%), Gaps = 59/237 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDILD 48
           +TG++ GIG        Q+    + +T R + R +E  + + K             D+  
Sbjct: 10  ITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 68

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL----HTMRTNYFALIDVC 104
           ++    + +    + G +DVLVNNA  A           Q +     T++ N  A+I++ 
Sbjct: 69  EDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMT 128

Query: 105 DILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             + P L +           G + +V+                                +
Sbjct: 129 KKVKPHLVASK---------GEIVNVS-----------------------------SIVA 150

Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG 221
             +       YA  K  + + +      L++  IR    VN V PG V T  ++  G
Sbjct: 151 GPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIR----VNSVSPGMVETGFTNAMG 203

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 74.3 bits (182), Expect = 1e-16
 Identities = 30/232 (12%), Positives = 57/232 (24%), Gaps = 69/232 (29%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDI-LDK 49
              A  GIG    + L+++ +   ++            E               D+ +  
Sbjct: 10  FVAALGGIGLDTSRELVKR-NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPV 68

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
              K L   +  +   VD+L+N A I                T+  N+  L++    +  
Sbjct: 69  AESKKLLKKIFDQLKTVDILINGAGI----LDDHQI----ERTIAINFTGLVNTTTAILD 120

Query: 110 LLR-----SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
                     G + N+ S  G                                       
Sbjct: 121 FWDKRKGGPGGIIANICSVTGF-------------------------------------- 142

Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                     Y+A+K  V   +     L     +        ++PG   T +
Sbjct: 143 --NAIHQVPVYSASKAAVVSFTNSLAKLAPITGVT----AYSINPGITRTPL 188

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 73.9 bits (181), Expect = 2e-16
 Identities = 40/226 (17%), Positives = 65/226 (28%), Gaps = 52/226 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
           +TG   GIG    K  ++     + +       GQ+    +           D+     +
Sbjct: 11  ITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDV 69

Query: 53  KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH--TMRTNYFALIDVCDILFPL 110
           + L D   A+HG +D++  N  +      S            M  N +    V      +
Sbjct: 70  RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARV 129

Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
           +    +        G +    S                               S T G  
Sbjct: 130 MIPAKK--------GSIVFTAS-----------------------------ISSFTAGEG 152

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            +  Y ATK  V  L+      L +  IR    VNCV P  V + +
Sbjct: 153 VSHVYTATKHAVLGLTTSLCTELGEYGIR----VNCVSPYIVASPL 194

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 73.6 bits (180), Expect = 2e-16
 Identities = 46/226 (20%), Positives = 72/226 (31%), Gaps = 54/226 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
            TGA +GIG GI   L ++   ++      +   +E + +L+KL         DI   + 
Sbjct: 11  TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSE 70

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           + AL D   +  GG+D +++N+ +    +  E            N      V        
Sbjct: 71  VVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC 130

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           R  GR++  SS    +                                         G P
Sbjct: 131 RRGGRIILTSSIAAVM----------------------------------------TGIP 150

Query: 172 NSAY-AATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           N A  A +K  V               +     VNC+ PG V TDM
Sbjct: 151 NHALYAGSKAAVEGFCRAFAVDCGAKGVT----VNCIAPGGVKTDM 192

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 73.6 bits (179), Expect = 2e-16
 Identities = 52/241 (21%), Positives = 87/241 (36%), Gaps = 41/241 (17%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG--IIYLTARDASRGQEALEKLQ--------KLDILDKN 50
           +TG N+G+G G+VK L+        ++ T R+  + +E  +  +        ++D+ + +
Sbjct: 7   ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFD 66

Query: 51  SIKALHD--HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQA-LHTMRTNYFALIDVCDIL 107
           +   L        +  G++VL NNA IA K        SQ  L T++TN    I +    
Sbjct: 67  AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC 126

Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
            PLL+   +             +                      +N    L     +T 
Sbjct: 127 LPLLKKAAKANESQPMGVGRAAI----------------------INMSSILGSIQGNTD 164

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           GG    AY  +K  +   +      L    I        +HPG+V TDM     PL +  
Sbjct: 165 GGM--YAYRTSKSALNAATKSLSVDLYPQRIM----CVSLHPGWVKTDMGGSSAPLDVPT 218

Query: 228 D 228
            
Sbjct: 219 S 219

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 73.5 bits (180), Expect = 2e-16
 Identities = 44/244 (18%), Positives = 78/244 (31%), Gaps = 57/244 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDILD 48
           +TG++ GIG        ++    + +T R+  R +E  +++ K             D+ +
Sbjct: 9   ITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 67

Query: 49  KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL--HTMRTNYFALIDVCDI 106
            +    + +   A+ G +D+LVNNA       ++       L   T + N+ A+I++   
Sbjct: 68  ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQK 127

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
               L      +                                      V     G   
Sbjct: 128 TKEHLIKTKGEIV------------------------------------NVSSIVAGPQA 151

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTID 226
             G+P   YA  K  + + +      L Q  +R    VN V PG V T      G     
Sbjct: 152 HSGYP--YYACAKAALDQYTRCTAIDLIQHGVR----VNSVSPGAVATGFMGAMGLPETA 205

Query: 227 QDNI 230
            D +
Sbjct: 206 SDKL 209

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.3 bits (177), Expect = 5e-16
 Identities = 49/224 (21%), Positives = 71/224 (31%), Gaps = 57/224 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKAL 55
           VTGA KGIG   VK L       +    R  S      ++        +D+ D ++ +  
Sbjct: 10  VTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKA 68

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL---R 112
                   G VD+LVNNAA+       E        +   N  ++  V  ++   +    
Sbjct: 69  LG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG 124

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
             G +VNVSS                                                  
Sbjct: 125 VPGSIVNVSSM----------------------------------------VAHVTFPNL 144

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             Y++TK  +T L+      L    IR    VN V+P  V TDM
Sbjct: 145 ITYSSTKGAMTMLTKAMAMELGPHKIR----VNSVNPTVVLTDM 184

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 71.6 bits (175), Expect = 9e-16
 Identities = 47/227 (20%), Positives = 82/227 (36%), Gaps = 56/227 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA +GIG  I K L +     +   +R        +++++           D+  K  
Sbjct: 15  VTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEE 73

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP-- 109
           I  + + +  EH  VD+LVNNA I            +    +RTN  +L  +   +    
Sbjct: 74  ISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRM 133

Query: 110 LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           +   +GR++N+SS  G                                          G 
Sbjct: 134 INNRYGRIINISSIVGL----------------------------------------TGN 153

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
              + Y+++K GV   +      L+   I     VN + PG++++DM
Sbjct: 154 VGQANYSSSKAGVIGFTKSLAKELASRNIT----VNAIAPGFISSDM 196

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 71.3 bits (174), Expect = 1e-15
 Identities = 46/233 (19%), Positives = 76/233 (32%), Gaps = 52/233 (22%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTGA  GIG   +    ++    +    R+     EA+  L+        D+ D  +++A
Sbjct: 10  VTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEA 68

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH 114
           +      E G +  + + A +A    S           +R N      V      +L   
Sbjct: 69  VFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 128

Query: 115 GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA 174
           G +V   S  G                                            +  + 
Sbjct: 129 GSLVLTGSVAGLGA-----------------------------------------FGLAH 147

Query: 175 YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
           YAA KLGV  L+      L++  +R    VN + PG + T M++G  P   +Q
Sbjct: 148 YAAGKLGVVGLARTLALELARKGVR----VNVLLPGLIQTPMTAGLPPWAWEQ 196

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 1e-15
 Identities = 39/228 (17%), Positives = 75/228 (32%), Gaps = 56/228 (24%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLD----------ILDKN 50
           VTGA+KGIG  +   L +     + +TAR     Q+ +    +L           + D  
Sbjct: 19  VTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 77

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
             +          GG+D+L+ N      +N           +M  N+ + + +     P+
Sbjct: 78  FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 137

Query: 111 L-RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
           L +S+G +V VSS  G                                            
Sbjct: 138 LKQSNGSIVVVSSLAGK----------------------------------------VAY 157

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLV-VNCVHPGYVNTDM 216
              +AY+A+K  +        ++  + ++    V +     G ++T+ 
Sbjct: 158 PMVAAYSASKFALDGFF---SSIRKEYSVSRVNVSITLCVLGLIDTET 202

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 71.0 bits (173), Expect = 2e-15
 Identities = 40/228 (17%), Positives = 73/228 (32%), Gaps = 57/228 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTGA   IG      L ++    I L   +    ++A   +++          D+  + +
Sbjct: 10  VTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEA 68

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGS---QALHTMRTNYFALIDVCDILF 108
           +    D +  + G +D L NNA         + + S     + T+       +       
Sbjct: 69  VIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQ 128

Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
            + +++GR+VN +S  G                                         KG
Sbjct: 129 MITQNYGRIVNTASMAGV----------------------------------------KG 148

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
               +AY  +K  +  L+      L+   IR    VN + PGY+    
Sbjct: 149 PPNMAAYGTSKGAIIALTETAALDLAPYNIR----VNAISPGYMGPGF 192

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 70.1 bits (171), Expect = 4e-15
 Identities = 43/225 (19%), Positives = 75/225 (33%), Gaps = 53/225 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           +TGA  GIG  I           + ++  +A      ++++Q+L         DI  +  
Sbjct: 16  ITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQE 74

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           + AL D   ++ G VD+LVNNA            G +       ++    ++    F  L
Sbjct: 75  LSALADFAISKLGKVDILVNNAGGG---------GPKPFDMPMADFRRAYELNVFSFFHL 125

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
                     +  G +  +TS A + K ++        +A  +    +A D         
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFD--------- 176

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
                                L +  IR    VN + PG + TD 
Sbjct: 177 ---------------------LGEKNIR----VNGIAPGAILTDA 196

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 69.0 bits (168), Expect = 1e-14
 Identities = 47/228 (20%), Positives = 77/228 (33%), Gaps = 50/228 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTGA  GIG  I + L ++    +++ AR     +  L++L++          D+     
Sbjct: 7   VTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 65

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I+AL   +   +G VDVLVNNA       ++E      L  + TN   +  V   +    
Sbjct: 66  IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAG 125

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
               R      +                                                
Sbjct: 126 GMLERGTGRIVNIASTGGKQGV------------------------------------VH 149

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
            + Y+A+K GV   +      L++  I     VN V PG+V T M++ 
Sbjct: 150 AAPYSASKHGVVGFTKALGLELARTGIT----VNAVCPGFVETPMAAS 193

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 68.6 bits (167), Expect = 1e-14
 Identities = 41/227 (18%), Positives = 68/227 (29%), Gaps = 53/227 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           V+G  +G+G   V+ ++ +    +         G+    +L        LD+      KA
Sbjct: 11  VSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKA 69

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV--CDILFPLLR 112
             D      GG+ VLVNNA I       +   ++    +  N   +       +      
Sbjct: 70  AVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA 129

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
             G ++N+SS  G                                               
Sbjct: 130 GRGSIINISSIEGLAGT----------------------------------------VAC 149

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
             Y ATK  V  L+       + +     + VN +HPG V T M+  
Sbjct: 150 HGYTATKFAVRGLT----KSTALELGPSGIRVNSIHPGLVKTPMTDW 192

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 68.6 bits (167), Expect = 2e-14
 Identities = 36/231 (15%), Positives = 74/231 (32%), Gaps = 50/231 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           +TG++ G+G  +      +   ++             LE+++K+         D+  ++ 
Sbjct: 12  ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           +  L      E G +DV++NNA +   V+S E   S     + TN               
Sbjct: 72  VINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYF 131

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
             +          G + +++S                          L    + +KGG  
Sbjct: 132 VEN-------DIKGTVINMSSVH------------------EKIPWPLFVHYAASKGGMK 166

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
                                L+ +   + + VN + PG +NT +++ K  
Sbjct: 167 LMTET----------------LALEYAPKGIRVNNIGPGAINTPINAEKFA 201

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 68.6 bits (167), Expect = 2e-14
 Identities = 42/230 (18%), Positives = 69/230 (30%), Gaps = 59/230 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDK 49
           +TG   G+G      L  +    + L    +   + +   + +            D+ D+
Sbjct: 9   ITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 67

Query: 50  NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFA---LIDVCDI 106
             ++A         G +D   NNA I  K N +E F +     + +       L     +
Sbjct: 68  AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVL 127

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
                +  G VVN +S  G                                         
Sbjct: 128 KIMREQGSGMVVNTASVGGI---------------------------------------- 147

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           +G    S YAA K GV  L+        +  IR    +N + PG + T M
Sbjct: 148 RGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR----INAIAPGAIWTPM 193

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 67.8 bits (165), Expect = 3e-14
 Identities = 35/228 (15%), Positives = 70/228 (30%), Gaps = 52/228 (22%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTGA +GIG  +   L ++   +I   A      +E +  ++K          ++     
Sbjct: 23  VTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVED 82

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I  + +      G +D++ +N+ +    +  +    +       N      V    +  L
Sbjct: 83  IVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL 142

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
              GR++ + S  G    V                                         
Sbjct: 143 EIGGRLILMGSITGQAKAV---------------------------------------PK 163

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
           ++ Y+ +K  +   +      ++   I     VN V PG + TDM   
Sbjct: 164 HAVYSGSKGAIETFARCMAIDMADKKIT----VNVVAPGGIKTDMYHA 207

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 66.7 bits (162), Expect = 5e-14
 Identities = 45/230 (19%), Positives = 82/230 (35%), Gaps = 55/230 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
           VTGA++GIG  I   L +    ++   AR A   +E  ++++           D+  +  
Sbjct: 6   VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEAD 65

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           ++A+        G +DV+VNNA I           SQ    +  N   +         ++
Sbjct: 66  VEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIM 125

Query: 112 --RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
             +  GR++N++S  G                                          G 
Sbjct: 126 MKKRKGRIINIASVVGL----------------------------------------IGN 145

Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
              + YAA K GV           +++    ++ VN V PG++ +DM++ 
Sbjct: 146 IGQANYAAAKAGVIG----FSKTAAREGASRNINVNVVCPGFIASDMTAK 191

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 66.7 bits (162), Expect = 5e-14
 Identities = 42/221 (19%), Positives = 74/221 (33%), Gaps = 49/221 (22%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG N+GIG  I + L       + +T R +   +       ++D+ D +++      +E
Sbjct: 12  VTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPKGLFG--VEVDVTDSDAVDRAFTAVE 68

Query: 61  AEHGGVDVLVNNAAIAFKVNSSE--PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVV 118
              G V+VLV+NA ++             + +          +             GR++
Sbjct: 69  EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI 128

Query: 119 NVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAAT 178
            + S  G                                          G    + YAA+
Sbjct: 129 FIGSVSGL----------------------------------------WGIGNQANYAAS 148

Query: 179 KLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
           K GV  ++      LS+  +      N V PGY++TDM+  
Sbjct: 149 KAGVIGMARSIARELSKANVT----ANVVAPGYIDTDMTRA 185

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 66.7 bits (162), Expect = 8e-14
 Identities = 46/226 (20%), Positives = 79/226 (34%), Gaps = 53/226 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
           VTG +KGIGY IV+ L       +Y  +R+     E LE  +           D+L +  
Sbjct: 11  VTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTE 69

Query: 52  IKALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
              L   +     G +++LVNNA +     + +         M TN+ A   +       
Sbjct: 70  RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ----- 124

Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
                  +  +S  G++  ++S A                                    
Sbjct: 125 ---IAYPLLKASQNGNVIFLSSIA------------------------------GFSALP 151

Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             S Y+A+K  + +++       ++D IR    VN V PG + T +
Sbjct: 152 SVSLYSASKGAINQMTKSLACEWAKDNIR----VNSVAPGVILTPL 193

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 66.6 bits (162), Expect = 9e-14
 Identities = 27/138 (19%), Positives = 43/138 (31%), Gaps = 13/138 (9%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
           +TG   G+G  +V   + +    + +  + A R  E              D+      K 
Sbjct: 10  ITGGASGLGRALVDRFVAE-GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQ 68

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-----HTMRTNYFALIDVCDILFP 109
                 A  G +D L+ NA I     +      ++L          N    I       P
Sbjct: 69  AASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLP 128

Query: 110 LLR-SHGRVVNVSSSCGH 126
            L  S G V+   S+ G 
Sbjct: 129 ALVASRGNVIFTISNAGF 146

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 1e-13
 Identities = 40/230 (17%), Positives = 70/230 (30%), Gaps = 58/230 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------------KLDI 46
           VTG   GIG  IVK L++     + + +R   R + A ++LQ              + +I
Sbjct: 17  VTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI 75

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
            ++  +  L        G ++ LVNN            F S A H     + A+++    
Sbjct: 76  RNEEEVNNLVKSTLDTFGKINFLVNNGGGQ--------FLSPAEHISSKGWHAVLETNLT 127

Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
               +        +    G + ++                                    
Sbjct: 128 GTFYMCKAVYSSWMKEHGGSIVNIIV-------------------------------PTK 156

Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            G        A + GV  L+       +   IR    +NCV PG + +  
Sbjct: 157 AGFPLAVHSGAARAGVYNLTKSLALEWACSGIR----INCVAPGVIYSQT 202

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 64.4 bits (156), Expect = 3e-13
 Identities = 51/224 (22%), Positives = 86/224 (38%), Gaps = 53/224 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           VTGA++GIG  I + L  +    +  TA   +  Q   + L        L++ D  SI++
Sbjct: 9   VTGASRGIGRAIAETLAAR-GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIES 67

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL--R 112
           + + + AE G VD+LVNNA I            +    + TN  ++  +   +   +  +
Sbjct: 68  VLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK 127

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
            HGR++ + S  G +                                        G    
Sbjct: 128 RHGRIITIGSVVGTM----------------------------------------GNGGQ 147

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           + YAA K G+   S      L+++     + VN V PG++ TDM
Sbjct: 148 ANYAAAKAGLIGFS----KSLAREVASRGITVNVVAPGFIETDM 187

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 4e-13
 Identities = 53/224 (23%), Positives = 75/224 (33%), Gaps = 57/224 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKAL 55
           VTGA KGIG G V+ L       +   +R  +     + +        +D+ D  + +  
Sbjct: 12  VTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERA 70

Query: 56  HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL---R 112
                   G VD+LVNNAA+A      E        +   N  A+I V  I+   L    
Sbjct: 71  L----GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG 126

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
             G +VNVSS C                                               +
Sbjct: 127 VPGAIVNVSSQCSQRAV----------------------------------------TNH 146

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           S Y +TK  +  L+ +    L    IR    VN V+P  V T M
Sbjct: 147 SVYCSTKGALDMLTKVMALELGPHKIR----VNAVNPTVVMTSM 186

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 63.3 bits (153), Expect = 1e-12
 Identities = 40/225 (17%), Positives = 71/225 (31%), Gaps = 51/225 (22%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
           VTGA +GIG  I   L++     + +   + +  +    ++ +         +D+ D++ 
Sbjct: 6   VTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQ 64

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           + A  +      GG DV+VNNA +A                   N   +I          
Sbjct: 65  VFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAF 124

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           +  G    + ++C    HV +                                       
Sbjct: 125 KKEGHGGKIINACSQAGHVGN-------------------------------------PE 147

Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            + Y+++K  V  L+      L+   I     VN   PG V T M
Sbjct: 148 LAVYSSSKFAVRGLTQTAARDLAPLGIT----VNGYCPGIVKTPM 188

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.3 bits (153), Expect = 1e-12
 Identities = 35/248 (14%), Positives = 75/248 (30%), Gaps = 62/248 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDG--IIYLTARDASRGQEALEKLQ-----------KLDIL 47
           +TGA++G G  +   L +      ++ ++AR  S  ++  E+L              D+ 
Sbjct: 11  LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG 70

Query: 48  DKNSIKALH----DHLEAEHGGVDVLVNNAAIAFKVNS---SEPFGSQALHTMRTNYFAL 100
            +  ++ L     +    E     +L+NNAA    V+    +    ++  +    N  ++
Sbjct: 71  TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSM 130

Query: 101 IDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
           + +        +    +     +   LC +                              
Sbjct: 131 LCLTSGTLNAFQDSPGLSKTVVNISSLCAL------------------------------ 160

Query: 161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
                 +       Y A K     L   Q     + ++R    V    PG ++ DM    
Sbjct: 161 ------QPYKGWGLYCAGKAARDMLY--QVLAAEEPSVR----VLSYAPGPLDNDMQQLA 208

Query: 221 GPLTIDQD 228
              + D +
Sbjct: 209 RETSKDPE 216

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 62.2 bits (150), Expect = 3e-12
 Identities = 34/232 (14%), Positives = 59/232 (25%), Gaps = 42/232 (18%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------------LD 45
           +TG  + IG+ I   L QQ    + +  R +    + L                    L 
Sbjct: 6   ITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 64

Query: 46  ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCD 105
               +  + + D      G  DVLVNNA+  +         +      +     + ++  
Sbjct: 65  SSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFG 124

Query: 106 ILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
                                  +  +     +     +         N  V    D   
Sbjct: 125 ----------------------SNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT 162

Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
                    Y   K  +  L+      L+   IR    VN V PG      +
Sbjct: 163 DLPLPGFCVYTMAKHALGGLTRAAALELAPRHIR----VNAVAPGLSLLPPA 210

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 3e-12
 Identities = 30/229 (13%), Positives = 61/229 (26%), Gaps = 58/229 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
           +TG   G+G G+   L         + +R     +   E++           + D+ D +
Sbjct: 30  ITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPD 88

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV---CDIL 107
            ++     L    G  ++++NNAA  F   +     +               V       
Sbjct: 89  MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ 148

Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
               +     +++++                                             
Sbjct: 149 LIKAQKGAAFLSITTI----------------------------------------YAET 168

Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           G       A+ K GV  +S    A   +  +R     N + PG + T  
Sbjct: 169 GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR----FNVIQPGPIKTKG 213

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 62.1 bits (150), Expect = 3e-12
 Identities = 46/242 (19%), Positives = 81/242 (33%), Gaps = 56/242 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
           VTG+  GIG GI   L  Q   I+     DA+  ++    L             D+    
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
           +++ L D+   + G +D+LVNNA I       +    +    +  N  A+        P 
Sbjct: 69  AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH 128

Query: 110 -LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
              +  GR++N++S+ G +                                         
Sbjct: 129 MKKQGFGRIINIASAHGLVAS--------------------------------------- 149

Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQD 228
               SAY A K GV   + +     +   I      N + PG+V T +   +     +++
Sbjct: 150 -ANKSAYVAAKHGVVGFTKVTALETAGQGIT----ANAICPGWVRTPLVEKQISALAEKN 204

Query: 229 NI 230
            +
Sbjct: 205 GV 206

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 2e-11
 Identities = 43/232 (18%), Positives = 64/232 (27%), Gaps = 62/232 (26%)

Query: 1   VTGANKGIGYGIVKGLIQQ--FDGIIYLTARDASRGQEALEKLQKL------------DI 46
           +TG + GIG  +   L         +Y T RD        E  + L            D+
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDV 66

Query: 47  LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
            D  S+ A  +      G VDVLV NA +                 +  N    + +   
Sbjct: 67  RDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 107 LFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
             P +  R  GRV+   S  G                                       
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGL-------------------------------------- 146

Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
              G   N  Y A+K  +  L      LL    +     ++ +  G V+T  
Sbjct: 147 --MGLPFNDVYCASKFALEGLCESLAVLLLPFGVH----LSLIECGPVHTAF 192

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 3e-11
 Identities = 43/218 (19%), Positives = 67/218 (30%), Gaps = 46/218 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           +T A +GIG        ++    +  T  + S+ QE  +       +   + K   D   
Sbjct: 11  LTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFA 69

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP--LLRSHGRVV 118
            E   +DVL N A         +        +M  N  ++  +     P  L +  G ++
Sbjct: 70  NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNII 129

Query: 119 NVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAAT 178
           N+SS    +                                       KG      Y+ T
Sbjct: 130 NMSSVASSV---------------------------------------KGVVNRCVYSTT 150

Query: 179 KLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           K  V  L+    A   Q  IR     NCV PG V+T  
Sbjct: 151 KAAVIGLTKSVAADFIQQGIR----CNCVCPGTVDTPS 184

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 59.1 bits (142), Expect = 3e-11
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 15/140 (10%)

Query: 1   VTGA--NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLD--------ILDKN 50
           V G    + +G+ I   L +     + L+ +      EA +  + L         +    
Sbjct: 13  VMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDE 71

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH----TMRTNYFALIDVCDI 106
            + AL   ++   GG+D LV+  A A +      +           +  + ++L+ V   
Sbjct: 72  ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARR 131

Query: 107 LFPLLRSHGRVVNVSSSCGH 126
             PLLR  G +V ++     
Sbjct: 132 AEPLLREGGGIVTLTYYASE 151

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 59.0 bits (142), Expect = 3e-11
 Identities = 40/236 (16%), Positives = 72/236 (30%), Gaps = 48/236 (20%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
           +TG+ +GIG    +  +++    + +   +    +    ++        LD+ D+ SI  
Sbjct: 10  ITGSARGIGRAFAEAYVRE-GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDR 68

Query: 55  LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH 114
               L    G +D+LVNNAA+       E            N    + +   +   + + 
Sbjct: 69  CVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAG 128

Query: 115 GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA 174
           GR   + +                                             G      
Sbjct: 129 GRGGKIINMASQAGRR-------------------------------------GEALVGV 151

Query: 175 YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI 230
           Y ATK  V  L+      L +  I     VN + PG V+ +   G      D +N+
Sbjct: 152 YCATKAAVISLTQSAGLNLIRHGIN----VNAIAPGVVDGEHWDGVDAKFADYENL 203

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 58.0 bits (139), Expect = 7e-11
 Identities = 23/224 (10%), Positives = 56/224 (25%), Gaps = 45/224 (20%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-KLDILDKNSIKALHDHL 59
           V G    +G  I++   +     +      A+   ++   +    +  ++          
Sbjct: 7   VYGGKGALGSAILEFFKKN-GYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTAS 65

Query: 60  EAEHGGVDVLVNN-AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVV 118
             +   VD +       A    SS+ F   A   ++ + ++      +    L+  G + 
Sbjct: 66  SLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQ 125

Query: 119 NVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAAT 178
              ++                                                   Y   
Sbjct: 126 LTGAAAAM----------------------------------------GPTPSMIGYGMA 145

Query: 179 KLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
           K  V  L+           + ++  V  + P  ++T M+    P
Sbjct: 146 KAAVHHLT--SSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP 187

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 55.8 bits (134), Expect = 4e-10
 Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 49/222 (22%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           V  A++GIG  +   L Q+    + + AR+    + +  +    D      ++   D L 
Sbjct: 9   VLAASRGIGRAVADVLSQE-GAEVTICARNEELLKRSGHRYVVCD------LRKDLDLLF 61

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNV 120
            +   VD+LV NA         E         + + +  +I +     P ++  G     
Sbjct: 62  EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG----- 116

Query: 121 SSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKL 180
               G +  +                                 S            + ++
Sbjct: 117 ---WGRIVAI------------------------------TSFSVISPIENLYTSNSARM 143

Query: 181 GVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
            +T         LS +     + VNCV PG+  T+       
Sbjct: 144 ALTGFL----KTLSFEVAPYGITVNCVAPGWTETERVKELLS 181

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 6e-10
 Identities = 23/219 (10%), Positives = 48/219 (21%), Gaps = 47/219 (21%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           V G    +G   V+    + +  +       +    A   + K+          +   + 
Sbjct: 7   VYGGRGALGSRCVQAFRAR-NWWVASIDVVENEEASA-SVIVKMTDSFTEQADQVTAEVG 64

Query: 61  AEHGG--VDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPLLRSHGRV 117
              G   VD ++  A      N+      +      + + +       +    L+  G +
Sbjct: 65  KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLL 124

Query: 118 VNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAA 177
               +                                             G      Y  
Sbjct: 125 TLAGAKAAL----------------------------------------DGTPGMIGYGM 144

Query: 178 TKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
            K  V +L        S   +        V P  ++T M
Sbjct: 145 AKGAVHQLCQSLAGKNS--GMPSGAAAIAVLPVTLDTPM 181

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 54.9 bits (131), Expect = 1e-09
 Identities = 41/217 (18%), Positives = 68/217 (31%), Gaps = 31/217 (14%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
           ++G   GIG    K L       I       +            D+      K A+ D L
Sbjct: 6   ISGCATGIGAATRKVLEAA-GHQIVGIDIRDAEVIA--------DLSTAEGRKQAIADVL 56

Query: 60  EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVN 119
                G+D LV  A +      ++  G    + +  NYF   ++ D   P L+   +   
Sbjct: 57  AKCSKGMDGLVLCAGLGP---QTKVLG----NVVSVNYFGATELMDAFLPALKKGHQPAA 109

Query: 120 VSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATK 179
           V  S     H+  +     L  E     +  A++           H      N AYA +K
Sbjct: 110 VVISSVASAHLAFDKNPLALALEAGEEAKARAIV----------EHAGEQGGNLAYAGSK 159

Query: 180 LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
             +T     +            + +N + PG   T +
Sbjct: 160 NALTVAVRKRA----AAWGEAGVRLNTIAPGATETPL 192

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 43.7 bits (102), Expect = 4e-06
 Identities = 12/127 (9%), Positives = 28/127 (22%), Gaps = 1/127 (0%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           V      +G      L  +   ++    +       A    ++  +    +  A      
Sbjct: 28  VLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRA 87

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNV 120
               G   +    AI  ++     +            +       I        G+    
Sbjct: 88  EAVKGAHFVFTAGAIGLELLPQAAW-QNESSIEIVADYNAQPPLGIGGIDATDKGKEYGG 146

Query: 121 SSSCGHL 127
             + G L
Sbjct: 147 KRAFGAL 153

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 43.5 bits (101), Expect = 8e-06
 Identities = 21/104 (20%), Positives = 29/104 (27%), Gaps = 27/104 (25%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------------- 43
           VTGA K +G  I +GL  +   +     R A+        L                   
Sbjct: 7   VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 66

Query: 44  ----------LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF 77
                       +        L        G  DVLVNNA+  +
Sbjct: 67  TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY 110

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 43.3 bits (101), Expect = 9e-06
 Identities = 34/224 (15%), Positives = 52/224 (23%), Gaps = 53/224 (23%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           VTG   G+G      L  +    + +             +       D     A      
Sbjct: 6   VTGGASGLGRAAALALKAR-GYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEA 64

Query: 61  AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR-------- 112
                V       A                  +  N     +V  +    +R        
Sbjct: 65  PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEG 124

Query: 113 SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN 172
             G +VN +S                                            +G    
Sbjct: 125 QRGVIVNTASVAAF----------------------------------------EGQIGQ 144

Query: 173 SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
           +AYAA+K GV  L+      L+   IR    V  V PG  +T +
Sbjct: 145 AAYAASKGGVVALTLPAARELAGWGIR----VVTVAPGLFDTPL 184

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 29/239 (12%), Positives = 62/239 (25%), Gaps = 65/239 (27%)

Query: 1   VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
           +TG   G+G    + L+ Q      L     S G+   +KL    +     + +  D   
Sbjct: 10  ITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQT 68

Query: 61  AEHGG------------VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
           A                   +   +                   +  N     +V  ++ 
Sbjct: 69  ALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVA 128

Query: 109 PLLR--------SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA 160
             +           G ++N +S                                      
Sbjct: 129 GEMGQNEPDQGGQRGVIINTASVAAF---------------------------------- 154

Query: 161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
                 +G    +AY+A+K G+  ++      +++D     + V  + PG   T + + 
Sbjct: 155 ------EGQVGQAAYSASKGGIVGMT----LPIARDLAPIGIRVMTIAPGLFGTPLLTS 203

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 1  VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL 44
          VTG   G+G  I + L ++    + L +R       A E + +L
Sbjct: 14 VTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAEL 57

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 30/189 (15%)

Query: 1   VTGANKGIGYGIVKGLIQQ-FDGIIYLTARDASRGQEALEKLQ--------KLDILDKNS 51
           +TG    IG  +V+ +I+   D ++ +     +   E+L  +           DI D   
Sbjct: 5   ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAE 64

Query: 52  IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
           I  +      E    D +++ AA +    S           + TN   ++    +L    
Sbjct: 65  ITRIF-----EQYQPDAVMHLAAESHVDRSIT----GPAAFIETN---IVGTYALLEVAR 112

Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
           +    +     +     H++++ +   L H  +    ++  +            T    P
Sbjct: 113 KYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT---------ETTAYAP 163

Query: 172 NSAYAATKL 180
           +S Y+A+K 
Sbjct: 164 SSPYSASKA 172

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 35.3 bits (80), Expect = 0.003
 Identities = 19/141 (13%), Positives = 43/141 (30%), Gaps = 16/141 (11%)

Query: 1   VTGANK--GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL--------DILDKN 50
           VTG      I YGI + + ++    +  T ++        E   +L        D+ +  
Sbjct: 10  VTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDA 68

Query: 51  SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQA-----LHTMRTNYFALIDVCD 105
           SI  +   L       D  V++   A        + +             + ++ + +  
Sbjct: 69  SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAK 128

Query: 106 ILFPLLRSHGRVVNVSSSCGH 126
               +L     ++ +S     
Sbjct: 129 ACRSMLNPGSALLTLSYLGAE 149

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	230
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.98
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.97
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.97
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.97
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.97
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.96
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.95
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.95
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.95
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.94
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.94
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.94
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.91
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.66
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.6
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.5
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.5
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.48
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.48
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.44
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.42
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.4
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.36
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.35
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.34
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.34
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.33
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.32
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.31
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.28
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.27
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.23
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.21
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.2
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.2
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.19
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.06
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.97
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.94
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.9
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.72
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.51
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.35
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.03
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	97.96
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.69
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.66
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.56
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.53
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.51
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.5
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.5
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.46
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.44
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.41
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.19
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.17
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.08
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.08
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.01
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.98
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.96
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.94
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.81
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.8
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.77
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.73
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.48
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.38
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.16
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.14
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.08
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.05
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.04
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.96
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.87
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.83
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	95.78
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.78
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.7
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.69
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.66
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	95.66
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	95.59
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	95.57
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.51
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.32
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.25
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.2
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	95.19
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.07
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.92
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.89
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	94.83
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	94.71
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	94.67
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.66
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	94.65
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.59
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	94.48
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	94.46
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.29
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.27
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	94.25
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	94.1
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	93.88
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	93.6
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	93.51
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.18
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.93
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.82
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.26
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.1
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	91.05
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	91.0
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.97
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	90.79
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	90.34
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	89.49
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	89.37
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	89.14
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	89.01
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	88.84
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	88.79
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	88.72
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	88.05
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	87.74
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	87.17
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	86.72
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	86.67
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	86.14
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	86.05
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	84.98
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	84.85
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	84.56
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	84.16
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	83.19
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	83.16
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	82.34
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	82.19
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	80.55
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	80.47

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-42  Score=284.83  Aligned_cols=229  Identities=48%  Similarity=0.720  Sum_probs=192.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|++|+++++..|++++|+.++++++.++++.         ||++|.++++++++++.+++++||+|||
T Consensus         8 VTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVn   87 (275)
T d1wmaa1           8 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVN   87 (275)
T ss_dssp             ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEE
T ss_pred             ECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEE
Confidence            7999999999999999998788999999999999998888764         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcccc-ccchHHHHHHhhhhchhHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLC-HVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |||+..+....+.+.++|+++|++|++|+++++++++|.|+++|+||++||..+... +...+....+............
T Consensus        88 NAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~  167 (275)
T d1wmaa1          88 NAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELV  167 (275)
T ss_dssp             CCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHH
T ss_pred             cCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccchhhhc
Confidence            999988888888888999999999999999999999999999999999999888443 2334444444444444433344


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCCCCccccC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDN  229 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~a  229 (230)
                      .....+...........+.++...|++||+++.+|++.++++++.+....||+||+|+||+|+|+|.+.....+||++|
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~~~~pee~A  246 (275)
T d1wmaa1         168 GLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGA  246 (275)
T ss_dssp             HHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCSBCHHHHT
T ss_pred             cccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcccCCHHHHH
Confidence            4444444444445445566677899999999999999999999886555589999999999999999999889998876

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=7.8e-41  Score=272.08  Aligned_cols=178  Identities=25%  Similarity=0.279  Sum_probs=163.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC------eEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG------IIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~------~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||+++|++|+++|+.      .|++++|+++++++..+++.+         +|++|+++++++++++.+++|+
T Consensus         6 ITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   85 (240)
T d2bd0a1           6 ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGH   85 (240)
T ss_dssp             EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSC
T ss_pred             EccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999765      489999999999988877754         8999999999999999999999


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ||+||||||.....++.+.+.++|+++|++|+.|+++++|+++|+|++  +|+||++||.++..                
T Consensus        86 iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----------------  149 (240)
T d2bd0a1          86 IDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK----------------  149 (240)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred             cceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC----------------
Confidence            999999999998899999999999999999999999999999999964  58999999999843                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP  222 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~~  222 (230)
                                              +.++...|++||+|+.+|+++++.|++++    |||||+|+||+++|+|++...+
T Consensus       150 ------------------------~~~~~~~Y~asK~al~~lt~~la~el~~~----gIrvn~i~PG~v~T~~~~~~~~  200 (240)
T d2bd0a1         150 ------------------------AFRHSSIYCMSKFGQRGLVETMRLYARKC----NVRITDVQPGAVYTPMWGKVDD  200 (240)
T ss_dssp             ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCSTTTCCCCS
T ss_pred             ------------------------CCCCChHHHHHHHHHHHHHHHHHHHhCcC----CeEEEEeeeCcccCchhhhcCH
Confidence                                    55667999999999999999999999998    8999999999999999876544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.4e-40  Score=267.13  Aligned_cols=175  Identities=25%  Similarity=0.320  Sum_probs=162.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++|+.|+++ +.+|++++|++++++...+++..      +|++|+++++++++++.+.+++||+||||||
T Consensus        11 ITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG   89 (244)
T d1nffa_          11 VSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAG   89 (244)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCc
Confidence            7999999999999999999 55899999999999988887754      8999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.++|+++|++|+.|+++++|+++|.|++  +|+||++||..+..                         
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-------------------------  144 (244)
T d1nffa_          90 ILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA-------------------------  144 (244)
T ss_dssp             CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------------------
T ss_pred             ccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc-------------------------
Confidence            998899999999999999999999999999999999864  58999999999843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                     +.++...|+++|+|+.+|+|+++.|++++    |||||+|+||+++|+|....
T Consensus       145 ---------------~~~~~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~~  193 (244)
T d1nffa_         145 ---------------GTVACHGYTATKFAVRGLTKSTALELGPS----GIRVNSIHPGLVKTPMTDWV  193 (244)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSGGGTTS
T ss_pred             ---------------ccccccchhhHHHHHHHHHHHHHHHhccc----CEEEEEEeeCCccChhHhhh
Confidence                           55567999999999999999999999998    89999999999999997654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.9e-40  Score=269.35  Aligned_cols=176  Identities=26%  Similarity=0.330  Sum_probs=157.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|++|+++|+.+++...|+++.++...++++.         +|++|+++++++++++.+++|+||+|||
T Consensus         6 ITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVn   85 (244)
T d1edoa_           6 VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVN   85 (244)
T ss_dssp             ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCcccc
Confidence            7999999999999999999554444456777777777766653         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.++|++++++|+.|+++++|+++|+|+  ++|+||++||.++..                      
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----------------------  143 (244)
T d1edoa_          86 NAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI----------------------  143 (244)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------------
T ss_pred             ccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC----------------------
Confidence            99999888999999999999999999999999999999995  459999999998843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        +.++...|++||+|+.+|+++++.|++++    |||||+|+||+++|+|.+..
T Consensus       144 ------------------~~~~~~~Y~asKaal~~ltk~lA~el~~~----gIrvN~I~PG~i~T~~~~~~  192 (244)
T d1edoa_         144 ------------------GNIGQANYAAAKAGVIGFSKTAAREGASR----NINVNVVCPGFIASDMTAKL  192 (244)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHTT
T ss_pred             ------------------CCCCCHHHHHHHHHHHHChHHHHHHHhhh----CcEEEEEecceeccHHHHHh
Confidence                              45567999999999999999999999998    89999999999999987654

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.3e-40  Score=268.85  Aligned_cols=176  Identities=26%  Similarity=0.376  Sum_probs=157.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|+.|+++ +..|++++|+++++++..+++.+         +|++|+++++++++++.+.+|+||+|||
T Consensus        15 ITGas~GIG~a~a~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvn   93 (251)
T d2c07a1          15 VTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVN   93 (251)
T ss_dssp             EESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeee
Confidence            7999999999999999999 56899999999999988887764         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||.....++.+.+.++|++++++|+.++++++++++|.|+  +.|+||++||.++..                      
T Consensus        94 nag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----------------------  151 (251)
T d2c07a1          94 NAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT----------------------  151 (251)
T ss_dssp             CCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------------
T ss_pred             ccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC----------------------
Confidence            99998888899999999999999999999999999999985  458999999998843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                        +.++...|++||+|+.+|+|++|.|++++    |||||+|+||+++|+|.....
T Consensus       152 ------------------~~~~~~~Y~asKaal~~ltr~lA~el~~~----gIrVN~V~PG~v~T~~~~~~~  201 (251)
T d2c07a1         152 ------------------GNVGQANYSSSKAGVIGFTKSLAKELASR----NITVNAIAPGFISSDMTDKIS  201 (251)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCC-----CC
T ss_pred             ------------------CCCCCHHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEccCCEecccccccC
Confidence                              45566899999999999999999999998    899999999999999987653

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-40  Score=269.03  Aligned_cols=177  Identities=24%  Similarity=0.325  Sum_probs=161.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|++|+++ +.+|++.+|+++++++..+++.+         ||++|+++++.+++++.+.+|++|++||
T Consensus        12 ITGas~GIG~~ia~~la~~-G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilin   90 (244)
T d1yb1a_          12 ITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVN   90 (244)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEe
Confidence            7999999999999999999 66899999999999988887764         9999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||......+.+.+.+.|+++|++|+.|+++++++++|.|++  .|+||++||.++..                      
T Consensus        91 nag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~----------------------  148 (244)
T d1yb1a_          91 NAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV----------------------  148 (244)
T ss_dssp             CCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC----------------------
T ss_pred             eccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC----------------------
Confidence            999998888888999999999999999999999999999964  48999999999954                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        +.+++..|++||+|+.+|+++|+.|+++...+ ||+||+|+||+|+|+|.+.
T Consensus       149 ------------------~~~~~~~Y~asKaal~~~~~~La~El~~~~~~-gI~V~~i~PG~v~T~~~~~  199 (244)
T d1yb1a_         149 ------------------SVPFLLAYCSSKFAAVGFHKTLTDELAALQIT-GVKTTCLCPNFVNTGFIKN  199 (244)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-TEEEEEEEETHHHHCSTTC
T ss_pred             ------------------CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCC-CEEEEEEEcCCCCChhhhC
Confidence                              33345899999999999999999999887655 8999999999999999875

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.7e-40  Score=268.54  Aligned_cols=175  Identities=29%  Similarity=0.417  Sum_probs=161.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+++++++..+++..      +|++++++++++++++.+.+|+||+||||||
T Consensus         9 ITGas~GIG~a~a~~l~~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg   87 (243)
T d1q7ba_           9 VTGASRGIGRAIAETLAAR-GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAG   87 (243)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCC
T ss_pred             EeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhh
Confidence            7999999999999999999 56888999999999988877654      9999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.++|+++|++|+.|+++++|+++|.|+  +.|+||++||..+..                         
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~-------------------------  142 (243)
T d1q7ba_          88 ITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM-------------------------  142 (243)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-------------------------
T ss_pred             hccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC-------------------------
Confidence            99888899999999999999999999999999999995  458999999988843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                     +.++...|++||+|+.+|+++++.|++++    |||||+|+||+++|+|.+..
T Consensus       143 ---------------~~~~~~~Y~asKaal~~lt~~lA~ela~~----gIrVN~I~PG~i~T~~~~~~  191 (243)
T d1q7ba_         143 ---------------GNGGQANYAAAKAGLIGFSKSLAREVASR----GITVNVVAPGFIETDMTRAL  191 (243)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHTS
T ss_pred             ---------------CCCCCHHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecceEechhhhhh
Confidence                           45566899999999999999999999998    89999999999999987654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1e-39  Score=268.46  Aligned_cols=175  Identities=26%  Similarity=0.369  Sum_probs=152.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++|++|+++ +.+|++++|+ .+.++...+++..          +|++|+++++++++++.+.+|+||+|
T Consensus         9 ITGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   87 (260)
T d1x1ta1           9 VTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDIL   87 (260)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEE
Confidence            7999999999999999999 5588888886 4556665554432          89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||||.....++.+.+.++|+++|++|+.|+++++|+++|+|++  .|+||++||.++..                    
T Consensus        88 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--------------------  147 (260)
T d1x1ta1          88 VNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--------------------  147 (260)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------------
T ss_pred             EeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee--------------------
Confidence            99999998888999999999999999999999999999999964  48999999999844                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                          +.++...|++||+|+.+|+++++.|++++    |||||+|+||+++|+|....
T Consensus       148 --------------------~~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~  196 (260)
T d1x1ta1         148 --------------------ASANKSAYVAAKHGVVGFTKVTALETAGQ----GITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCC------
T ss_pred             --------------------ccCCcchhhhhhhhHHHhHHHHHHHhchh----CcEEEEEecCCCCChhhhhh
Confidence                                55667899999999999999999999988    89999999999999997653

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=9.3e-40  Score=267.65  Aligned_cols=174  Identities=27%  Similarity=0.359  Sum_probs=160.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++|++|+++ +.+|++++|+++++++..+++..      +|++++++++++++++.+++|+||+||||||
T Consensus        10 VTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg   88 (254)
T d1hdca_          10 ITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAG   88 (254)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCc
Confidence            7999999999999999999 56899999999999888877653      9999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      .....++.+.+.++|++++++|+.|+++++|+++|.|+  +.|+||++||.++..                         
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~-------------------------  143 (254)
T d1hdca_          89 ISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM-------------------------  143 (254)
T ss_dssp             CCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------------------
T ss_pred             cccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc-------------------------
Confidence            99888899999999999999999999999999999986  358999999999844                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     +.++...|++||+|+.+|+++|+.|++++    |||||+|+||+++|+|...
T Consensus       144 ---------------~~~~~~~Y~asKaal~~lt~~lA~e~a~~----gIrVN~I~PG~v~T~~~~~  191 (254)
T d1hdca_         144 ---------------GLALTSSYGASKWGVRGLSKLAAVELGTD----RIRVNSVHPGMTYTPMTAE  191 (254)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHH
T ss_pred             ---------------cccchhhHHHHHHHHHHHHHHHHHHhCCC----ceEEEEeeeCcccCccchh
Confidence                           45567999999999999999999999998    8999999999999997643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.2e-39  Score=263.47  Aligned_cols=175  Identities=28%  Similarity=0.404  Sum_probs=157.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++|++|+++ +.+|++++|+.+++++..+++.+          +|++|+++++++++++.+++|+||+||
T Consensus        10 ITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV   88 (251)
T d1vl8a_          10 VTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVV   88 (251)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7999999999999999999 56899999999988877766532          899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|+++|++|+.|+++++|+++|.|++  .|+||+++|..+..                     
T Consensus        89 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~---------------------  147 (251)
T d1vl8a_          89 NAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE---------------------  147 (251)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC---------------------
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc---------------------
Confidence            9999988888999999999999999999999999999999965  47999999976622                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                        .+.++...|+++|+|+.+|+++++.|+.++    |||||+|+||+++|+|.+.
T Consensus       148 ------------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~I~PG~i~T~~~~~  196 (251)
T d1vl8a_         148 ------------------VTMPNISAYAASKGGVASLTKALAKEWGRY----GIRVNVIAPGWYRTKMTEA  196 (251)
T ss_dssp             ------------------CCSSSCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSTTTHH
T ss_pred             ------------------ccCccccchHHHHHhHHHHHHHHHHHhccc----CeEEEEEeeCcccCHHHHh
Confidence                              133445899999999999999999999998    7889999999999999753

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.1e-39  Score=264.90  Aligned_cols=173  Identities=24%  Similarity=0.326  Sum_probs=158.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|++|+++ +.+|++++|++++++++.+++.+         +|++|+++++++++++.+.||+||+|||
T Consensus         6 ITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   84 (255)
T d1gega_           6 VTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVN   84 (255)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             EcCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEe
Confidence            7999999999999999999 56899999999999988877754         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||+....++.+.+.++|++++++|+.|+++++|+++|.|+   +.++||++||.++..                     
T Consensus        85 nAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~---------------------  143 (255)
T d1gega_          85 NAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV---------------------  143 (255)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS---------------------
T ss_pred             cccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc---------------------
Confidence            99998888999999999999999999999999999999764   237899999998843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|++||+|+.+|++++|.|++++    |||||+|+||+++|+|+.
T Consensus       144 -------------------~~~~~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~  190 (255)
T d1gega_         144 -------------------GNPELAVYSSSKFAVRGLTQTAARDLAPL----GITVNGYCPGIVKTPMWA  190 (255)
T ss_dssp             -------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSHHHH
T ss_pred             -------------------cCcccccchhCHHHHHhhHHHHHHHhhhh----CcEEEEEecCcccChHHh
Confidence                               55567999999999999999999999998    899999999999998753

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=3.1e-39  Score=263.65  Aligned_cols=175  Identities=23%  Similarity=0.280  Sum_probs=148.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-hHHHHHhhh------cccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-GQEALEKLQ------KLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||++|||+++|+.|+++ +.+|++++|++.+ .+...+...      .+|++|+++++++++++.+.+|+||+|||||
T Consensus        10 VTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnA   88 (247)
T d2ew8a1          10 ITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNA   88 (247)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            7999999999999999999 5578888887653 333333322      2899999999999999999999999999999


Q ss_pred             CCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          74 AIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        74 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |.....++.+.+.++|+++|++|+.|+++++|+++|.|++  .|+||++||..+..                        
T Consensus        89 G~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~------------------------  144 (247)
T d2ew8a1          89 GIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL------------------------  144 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS------------------------
T ss_pred             CCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc------------------------
Confidence            9988888999999999999999999999999999999964  48999999998843                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                      +.++...|++||+|+.+|+++++.|++++    |||||+|+||+++|+|.+..
T Consensus       145 ----------------~~~~~~~Y~asKaal~~ltk~lA~ela~~----gIrVN~I~PG~i~T~~~~~~  193 (247)
T d2ew8a1         145 ----------------KIEAYTHYISTKAANIGFTRALASDLGKD----GITVNAIAPSLVRTATTEAS  193 (247)
T ss_dssp             ----------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCC--------
T ss_pred             ----------------cCcccccchhhhccHHHHHHHHHHHhccc----CeEEEEEeeCCCCCcccccc
Confidence                            55566899999999999999999999998    89999999999999997643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.7e-39  Score=265.53  Aligned_cols=173  Identities=30%  Similarity=0.384  Sum_probs=158.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+++++++..+++.+         +|++|+++++++++++.+.||+||+|||
T Consensus         7 ITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVn   85 (257)
T d2rhca1           7 VTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVN   85 (257)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEe
Confidence            7999999999999999999 56889999999999988887754         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc--c--CCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL--R--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l--~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      |||.....++.+.+.++|+++|++|+.|+++++|+++|.|  +  ..++||+++|..+..                    
T Consensus        86 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~--------------------  145 (257)
T d2rhca1          86 NAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--------------------  145 (257)
T ss_dssp             CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS--------------------
T ss_pred             cccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc--------------------
Confidence            9999888889999999999999999999999999999974  2  237999999998843                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|++||+|+.+|+++||.|++++    |||||+|+||+++|+|.+
T Consensus       146 --------------------~~~~~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~  192 (257)
T d2rhca1         146 --------------------GVVHAAPYSASKHGVVGFTKALGLELART----GITVNAVCPGFVETPMAA  192 (257)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTS----EEEEEEEEECSBCSHHHH
T ss_pred             --------------------ccccchhHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEeeCCCCCHHHH
Confidence                                55667999999999999999999999998    789999999999999753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.3e-39  Score=264.56  Aligned_cols=175  Identities=25%  Similarity=0.310  Sum_probs=143.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhc-CCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEH-GGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~-~~id~lv   70 (230)
                      ||||++|||+++|+.|+++ +..|++++|+++++++..+++..         +|++++++++++++++.+.+ ++||+||
T Consensus        13 VTGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilv   91 (259)
T d1xq1a_          13 VTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILI   91 (259)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCccccc
Confidence            7999999999999999999 55899999999999988877654         89999999999999999998 6899999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||...+.++.+.+.++|+++|++|+.|+++++|+++|.|+  +.|+||++||..+..                     
T Consensus        92 nnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~---------------------  150 (259)
T d1xq1a_          92 NNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV---------------------  150 (259)
T ss_dssp             EECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------------
T ss_pred             ccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc---------------------
Confidence            999999889999999999999999999999999999999996  358999999999844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                         +.++...|+++|+|+.+|++++|.|++++    |||||+|+||+++|+|....
T Consensus       151 -------------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~V~PG~i~T~~~~~~  199 (259)
T d1xq1a_         151 -------------------SASVGSIYSATKGALNQLARNLACEWASD----GIRANAVAPAVIATPLAEAV  199 (259)
T ss_dssp             -----------------------CCHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEECCSCC-------
T ss_pred             -------------------cccccccccccccchhhhhHHHHHHhccc----CeEEEEeccCcccCHHhhhh
Confidence                               34456899999999999999999999998    78899999999999997654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.2e-39  Score=264.75  Aligned_cols=174  Identities=22%  Similarity=0.298  Sum_probs=158.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|++|+++ +..|++++|++++++++.+++++         +|++++++++++++++.+.+|+||+|||
T Consensus        16 ITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvn   94 (255)
T d1fmca_          16 ITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVN   94 (255)
T ss_dssp             ETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeee
Confidence            7999999999999999999 56888899999999988877764         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      |||...+.++ +.+.++|++++++|+.|+++++|+++|.|++  .++||++||.++..                      
T Consensus        95 nAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~----------------------  151 (255)
T d1fmca_          95 NAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----------------------  151 (255)
T ss_dssp             CCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------------
T ss_pred             CCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc----------------------
Confidence            9998776655 6889999999999999999999999999964  57999999998843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        +.++...|++||+|+.+|++++|.|++++    |||||+|+||+++|++.+..
T Consensus       152 ------------------~~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~  200 (255)
T d1fmca_         152 ------------------KNINMTSYASSKAAASHLVRNMAFDLGEK----NIRVNGIAPGAILTDALKSV  200 (255)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHTT
T ss_pred             ------------------cccccccchhHHHHHHHHHHHHHHHhCcc----CeEEEEeeeCcCcChHhhcc
Confidence                              55567999999999999999999999998    89999999999999986543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.7e-39  Score=265.62  Aligned_cols=173  Identities=21%  Similarity=0.252  Sum_probs=156.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+.+++++..+++.+           +|++|+++++++++++.+++|+||+|
T Consensus         9 ITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiL   87 (258)
T d1iy8a_           9 ITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGF   87 (258)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            7999999999999999999 56899999999988887666532           89999999999999999999999999


Q ss_pred             EEccCCcc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          70 VNNAAIAF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        70 v~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |||||+.. ..++.+.+.++|+++|++|+.|+++++|+++|.|+  +.|+||++||..+..                   
T Consensus        88 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-------------------  148 (258)
T d1iy8a_          88 FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-------------------  148 (258)
T ss_dssp             EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-------------------
T ss_pred             EECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc-------------------
Confidence            99999864 46688899999999999999999999999999986  458999999998843                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                           +.++...|++||+|+.+|++++|.|++++    |||||+|+||+++|+|.+
T Consensus       149 ---------------------~~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~i~PG~v~T~~~~  195 (258)
T d1iy8a_         149 ---------------------GIGNQSGYAAAKHGVVGLTRNSAVEYGRY----GIRINAIAPGAIWTPMVE  195 (258)
T ss_dssp             ---------------------BCSSBHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSHHHH
T ss_pred             ---------------------CCCCchHHHHHHHHHHHHHHHHHHHhCcc----CceEEEEeeCcccCHHHH
Confidence                                 45567999999999999999999999998    788999999999998753

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.1e-39  Score=261.26  Aligned_cols=172  Identities=27%  Similarity=0.319  Sum_probs=154.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||+++|+.|+++ +..|++++|+++..+ ..+.+.    .+|++|+++++++++++.+.+|+||+||||||..
T Consensus        10 ITGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~   87 (248)
T d2d1ya1          10 VTGGARGIGRAIAQAFARE-GALVALCDLRPEGKE-VAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIA   87 (248)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSTTHHH-HHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHH-HHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCC
Confidence            7999999999999999999 568889999877543 333332    3999999999999999999999999999999999


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      .+.++.+.+.++|++++++|+.|+++++|+++|.|++  .|+||+++|..+..                           
T Consensus        88 ~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~---------------------------  140 (248)
T d2d1ya1          88 APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF---------------------------  140 (248)
T ss_dssp             CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS---------------------------
T ss_pred             CCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc---------------------------
Confidence            8999999999999999999999999999999999965  48999999999844                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                   +.++...|+++|+|+.+|+++++.|++++    |||||+|+||+++|+|..
T Consensus       141 -------------~~~~~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~v~T~~~~  187 (248)
T d2d1ya1         141 -------------AEQENAAYNASKGGLVNLTRSLALDLAPL----RIRVNAVAPGAIATEAVL  187 (248)
T ss_dssp             -------------BCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred             -------------cccccchhHHHHHHHHHHHHHHHHHhhhh----CcEEEEEeeCCCCCchHH
Confidence                         45567999999999999999999999998    899999999999998753

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=4.1e-39  Score=263.78  Aligned_cols=175  Identities=21%  Similarity=0.286  Sum_probs=160.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++|+.|+++ +..|++++|+++++++..+++..      +|++|+++++++++++.+.++++|+||||||
T Consensus        11 ITGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG   89 (253)
T d1hxha_          11 VTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAG   89 (253)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEeccc
Confidence            7999999999999999999 56899999999999888877754      8999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      ...+.++.+.+.++|+++|++|+.|+++++++++|.|++ +|+||++||..+..                          
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~--------------------------  143 (253)
T d1hxha_          90 ILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL--------------------------  143 (253)
T ss_dssp             CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS--------------------------
T ss_pred             ccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc--------------------------
Confidence            998889999999999999999999999999999999975 59999999999843                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                    +.++...|++||+|+.+|++++|.|+++.+.  |||||+|+||+++|+|.+
T Consensus       144 --------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~--~IrVN~I~PG~i~T~~~~  192 (253)
T d1hxha_         144 --------------PIEQYAGYSASKAAVSALTRAAALSCRKQGY--AIRVNSIHPDGIYTPMMQ  192 (253)
T ss_dssp             --------------CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEESEECCHHHH
T ss_pred             --------------CccccccccchhHHHHHHHHHHHHHHhhcCC--CEEEEEEeECCCcCHhHH
Confidence                          5556789999999999999999999998621  499999999999999754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2e-38  Score=258.06  Aligned_cols=175  Identities=23%  Similarity=0.234  Sum_probs=157.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+++++++..+++..    +|++|+++++++++++.+.+++||+||||||..
T Consensus        10 ITGas~GIG~aia~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~   88 (242)
T d1ulsa_          10 ITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGIT   88 (242)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCccc
Confidence            7999999999999999999 56899999999999888777654    999999999999999999999999999999998


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      .+.++.+.+.++|+++|++|+.|+++++|+++|.|+++  +.|+++||. +..                           
T Consensus        89 ~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~---------------------------  140 (242)
T d1ulsa_          89 RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYL---------------------------  140 (242)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGG---------------------------
T ss_pred             ccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-ccc---------------------------
Confidence            88889999999999999999999999999999999754  566666663 322                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                   +.++...|++||+|+.+|+++++.|++++    |||||+|+||+++|+|.....
T Consensus       141 -------------~~~~~~~Y~asKaal~~ltk~lA~ela~~----gIrVN~I~PG~v~T~~~~~~~  190 (242)
T d1ulsa_         141 -------------GNLGQANYAASMAGVVGLTRTLALELGRW----GIRVNTLAPGFIETRMTAKVP  190 (242)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTSSSC
T ss_pred             -------------CCCCCcchHHHHHHHHHHHHHHHHHHhhh----CcEEEEEeeCcccChhhhcCC
Confidence                         44566899999999999999999999998    899999999999999987653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=9.7e-39  Score=261.31  Aligned_cols=175  Identities=26%  Similarity=0.347  Sum_probs=158.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||+++|+.|+++ +..|++++|+.+.+++..+++..        +|++|+++++++++++.+.||+||+||||
T Consensus        11 VTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn   89 (251)
T d1zk4a1          11 ITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNN   89 (251)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEec
Confidence            7999999999999999999 56899999999999888877653        89999999999999999999999999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC---ceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~---g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||...+.++.+.+.++|+++|++|+.|+++++++++|.|+++   ++||++||..+..                      
T Consensus        90 Ag~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~----------------------  147 (251)
T d1zk4a1          90 AGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----------------------  147 (251)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----------------------
T ss_pred             cccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec----------------------
Confidence            999988999999999999999999999999999999999653   5899999998843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhh--hhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALL--SQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~--~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        +.++...|+++|+|+.+|++++|.|+  +++    |||||+|+||+++|+|....
T Consensus       148 ------------------~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~----gIrVN~I~PG~i~T~~~~~~  198 (251)
T d1zk4a1         148 ------------------GDPSLGAYNASKGAVRIMSKSAALDCALKDY----DVRVNTVHPGYIKTPLVDDL  198 (251)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTC----SEEEEEEEECCBCCHHHHTS
T ss_pred             ------------------cCCCchhHHHHHHHHhcchHHHHHHHhcCCC----cEEEEEEeCCCCCChhHHhc
Confidence                              45566899999999999999999995  455    79999999999999986543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.6e-38  Score=260.78  Aligned_cols=173  Identities=22%  Similarity=0.297  Sum_probs=159.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+.+++++..+++..      +|++|+++++++++++.+++|+||+||||||
T Consensus        10 VTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg   88 (256)
T d1k2wa_          10 ITGSARGIGRAFAEAYVRE-GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAA   88 (256)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecc
Confidence            7999999999999999999 56899999999999988887753      8999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc-c--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL-R--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l-~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      .....++.+.+.++|++++++|+.|+++++|+++|.| +  +.|+||++||..+..                        
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------------------------  144 (256)
T d1k2wa_          89 LFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR------------------------  144 (256)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------------------
T ss_pred             cccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc------------------------
Confidence            9888889999999999999999999999999999865 3  348999999998843                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                      +.++...|++||+|+.+|++++|.|++++    |||||+|+||+++|+|++
T Consensus       145 ----------------~~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~V~PG~i~T~~~~  191 (256)
T d1k2wa_         145 ----------------GEALVGVYCATKAAVISLTQSAGLNLIRH----GINVNAIAPGVVDGEHWD  191 (256)
T ss_dssp             ----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTHH
T ss_pred             ----------------ccccccchhhhhhHHHHHHHHHHHHhccc----CeEEEEEecCCCCchhhh
Confidence                            55667999999999999999999999998    899999999999999854

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-40  Score=267.02  Aligned_cols=174  Identities=27%  Similarity=0.399  Sum_probs=157.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||+++|+.|+++ +..|++++|+++.++...+++..     +|++|+++++++++++.+.|++||+||||||.
T Consensus        11 ITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~   89 (250)
T d1ydea1          11 VTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGH   89 (250)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccc
Confidence            7999999999999999999 56888999999999888877765     99999999999999999999999999999997


Q ss_pred             cc-ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHH
Q psy7994          76 AF-KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM  153 (230)
Q Consensus        76 ~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (230)
                      .. ..++.+.+.++|++++++|+.|+++++|+++|.|++ +|+||++||..+..                          
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~--------------------------  143 (250)
T d1ydea1          90 HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI--------------------------  143 (250)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH--------------------------
T ss_pred             cccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccc--------------------------
Confidence            64 455778899999999999999999999999999975 48999999998843                          


Q ss_pred             HHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                    +.++...|+++|+|+.+|++++|.|++++    |||||+|+||+|+|+|.+.
T Consensus       144 --------------~~~~~~~Y~asKaal~~lt~~lA~e~a~~----gIrVN~I~PG~i~T~~~~~  191 (250)
T d1ydea1         144 --------------GQAQAVPYVATKGAVTAMTKALALDESPY----GVRVNCISPGNIWTPLWEE  191 (250)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCHHHHH
T ss_pred             --------------cccCcchhHHHHhhHHHHHHHHHHHhccc----CeEEEEEeeCCCCChhHHH
Confidence                          44556899999999999999999999998    7889999999999998643

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=9.6e-39  Score=262.45  Aligned_cols=173  Identities=27%  Similarity=0.388  Sum_probs=158.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcC-CCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHG-GVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~-~id~lv   70 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+++++++..+++..         +|++|+++++++++++.++++ +||++|
T Consensus        13 ITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilv   91 (259)
T d2ae2a_          13 VTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILV   91 (259)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEE
Confidence            7999999999999999999 55899999999999988887754         899999999999999999987 899999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.|+++++++++|.|++  +|+||++||..+..                     
T Consensus        92 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~---------------------  150 (259)
T d2ae2a_          92 NNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL---------------------  150 (259)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS---------------------
T ss_pred             ECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc---------------------
Confidence            9999988888999999999999999999999999999999864  58999999998844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|+++|+|+.+|+|++|.|++++    |||||+|+||+|+|+|.+
T Consensus       151 -------------------~~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~  197 (259)
T d2ae2a_         151 -------------------AVPYEAVYGATKGAMDQLTRCLAFEWAKD----NIRVNGVGPGVIATSLVE  197 (259)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCSHHHH
T ss_pred             -------------------ccccccchHHHHHHHHHHHHHHHHHhCcC----ceEEEEeeeCcccCHHHH
Confidence                               45566999999999999999999999998    899999999999999854

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=7.9e-39  Score=263.14  Aligned_cols=172  Identities=22%  Similarity=0.262  Sum_probs=157.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|+.|+++ +.+|++++|++++++.+.+++.+         +|++|+++++++++++.+.+|+||+|||
T Consensus        10 ITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   88 (260)
T d1zema1          10 VTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFN   88 (260)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehh
Confidence            7999999999999999999 56899999999999988877754         8999999999999999999999999999


Q ss_pred             ccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          72 NAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        72 ~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      |||...+ .++.+.+.++|+++|++|+.++++++++++|.|+  +.|+||++||..+..                     
T Consensus        89 naG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~---------------------  147 (260)
T d1zema1          89 NAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK---------------------  147 (260)
T ss_dssp             CCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS---------------------
T ss_pred             hhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc---------------------
Confidence            9998754 6788999999999999999999999999999885  459999999988843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                         +.++...|++||+|+.+|+++++.|++++    |||||+|+||+|+|+|.
T Consensus       148 -------------------~~~~~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~v~T~~~  193 (260)
T d1zema1         148 -------------------GPPNMAAYGTSKGAIIALTETAALDLAPY----NIRVNAISPGYMGPGFM  193 (260)
T ss_dssp             -------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSHH
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHHHhhhh----CCEEEEeccCcccCcch
Confidence                               55567899999999999999999999998    89999999999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=7.1e-38  Score=258.48  Aligned_cols=176  Identities=21%  Similarity=0.269  Sum_probs=157.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||+++|++|+++ +.+|++++|+++++++..+++..        +|++|+++++++++++.+.+|+||++|||
T Consensus        11 ITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnn   89 (268)
T d2bgka1          11 ITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGN   89 (268)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccc
Confidence            7999999999999999999 56899999999999988887754        89999999999999999999999999999


Q ss_pred             cCCcccc--CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          73 AAIAFKV--NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        73 ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||.....  .+.+.+.++|++++++|+.|+++++|+++|.|++  .|+||+++|..+..                     
T Consensus        90 AG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~---------------------  148 (268)
T d2bgka1          90 VGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT---------------------  148 (268)
T ss_dssp             CCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC---------------------
T ss_pred             cccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc---------------------
Confidence            9986543  4778899999999999999999999999999854  48999999998843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCC-chhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                         +..+. ..|++||+|+.+|++++|.|++++    |||||+|+||+++|+|.....
T Consensus       149 -------------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~  199 (268)
T d2bgka1         149 -------------------AGEGVSHVYTATKHAVLGLTTSLCTELGEY----GIRVNCVSPYIVASPLLTDVF  199 (268)
T ss_dssp             -------------------CCTTSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCCSCCCCTTSS
T ss_pred             -------------------cccccccccchhHHHHHhCHHHHHHHhChh----CeEEEecCCCCccChHHhhhh
Confidence                               23333 589999999999999999999998    899999999999999987654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.8e-38  Score=259.08  Aligned_cols=173  Identities=23%  Similarity=0.265  Sum_probs=154.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++|++|+++ +.+|++++|+.+ .++...+++.+         +|++|+++++++++++.+++|+||+||
T Consensus        12 ITGas~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLV   90 (261)
T d1geea_          12 ITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMI   90 (261)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEee
Confidence            7999999999999999999 557888888754 56666665543         899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC---ceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH---GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~---g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||||...+.++.+.+.++|++++++|+.|+++++|+++|.|+++   ++||++||.++..                    
T Consensus        91 nnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~--------------------  150 (261)
T d1geea_          91 NNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--------------------  150 (261)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--------------------
T ss_pred             ccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc--------------------
Confidence            99999988889999999999999999999999999999998533   4699999998843                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                          +.++...|++||+|+.+|+++++.|++++    |||||+|+||+++|+|..
T Consensus       151 --------------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~I~PG~v~T~~~~  197 (261)
T d1geea_         151 --------------------PWPLFVHYAASKGGMKLMTETLALEYAPK----GIRVNNIGPGAINTPINA  197 (261)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSGGGH
T ss_pred             --------------------cCccccccccCCccchhhHHHHHHHhhhh----CcEEEEEeeCcCcCHhHh
Confidence                                45567899999999999999999999998    788999999999999864

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.1e-38  Score=257.20  Aligned_cols=172  Identities=26%  Similarity=0.368  Sum_probs=148.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||+++|+.|+++ +..|++++|+.+.+++..  ...+|++|+++++++++++.+.+++||+||||||...+.+
T Consensus        12 ITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~   88 (237)
T d1uzma1          12 VTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPKGLF--GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF   88 (237)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCTTSE--EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC---
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCcchhcCce--EEEEecCCHHHHHHHHHHHHHhcCCceEEEeeeccccccc
Confidence            7999999999999999999 668999999887665331  1239999999999999999999999999999999988889


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.++|++++++|+.++++++|+++|.|++  .|+||++||.++..                               
T Consensus        89 ~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~-------------------------------  137 (237)
T d1uzma1          89 LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-------------------------------  137 (237)
T ss_dssp             --CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------------------------
T ss_pred             HhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc-------------------------------
Confidence            999999999999999999999999999999964  47999999999944                               


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                               +.++...|++||+|+.+|+++++.|+.++    |||||+|+||+++|+|.+.
T Consensus       138 ---------~~~~~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~I~PG~v~T~~~~~  185 (237)
T d1uzma1         138 ---------GIGNQANYAASKAGVIGMARSIARELSKA----NVTANVVAPGYIDTDMTRA  185 (237)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHH
T ss_pred             ---------CCcccHHHHHHHHHHHHHHHHHHhhhhcC----CceeeeeeeCcCCChhhhc
Confidence                     44566899999999999999999999998    8999999999999998654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=4.1e-38  Score=257.73  Aligned_cols=175  Identities=15%  Similarity=0.134  Sum_probs=155.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+.+.+++...   .+..+|++++++++++++++.+.||+||+||||||...
T Consensus         5 VTGas~GiG~aiA~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~   83 (252)
T d1zmta1           5 VTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAP   83 (252)
T ss_dssp             ESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCC
Confidence            7999999999999999999 5689999998887766543   33349999999999999999999999999999999864


Q ss_pred             -ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          78 -KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        78 -~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                       ..++.+.+.++|++++++|+.++++++|+++|.|++  .|+||++||..+..                           
T Consensus        84 ~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~---------------------------  136 (252)
T d1zmta1          84 EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG---------------------------  136 (252)
T ss_dssp             CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS---------------------------
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc---------------------------
Confidence             467888999999999999999999999999999963  58999999998844                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                   +.+....|++||+|+.+|+|+++.|++++    |||||+|+||+++|++....
T Consensus       137 -------------~~~~~~~Y~asKaal~~lt~~lA~ela~~----gIrVN~I~PG~i~T~~~~~~  185 (252)
T d1zmta1         137 -------------PWKELSTYTSARAGACTLANALSKELGEY----NIPVFAIGPNYLHSEDSPYF  185 (252)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCCEEEEEESSBCCBTCCSS
T ss_pred             -------------ccccccccccccccHHHHHHHHHHHhccc----CcEEEEEecCCCcCcchhhh
Confidence                         45556899999999999999999999998    78899999999999997654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.4e-37  Score=256.14  Aligned_cols=176  Identities=24%  Similarity=0.299  Sum_probs=146.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||+++|++|+++ +.+|++++|+.++++++.+++.+            +|++++++++++++++.+.+|+||+
T Consensus        10 VTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   88 (264)
T d1spxa_          10 ITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDI   88 (264)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999 56899999999999888776642            8999999999999999999999999


Q ss_pred             EEEccCCcccc----CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          69 LVNNAAIAFKV----NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        69 lv~~ag~~~~~----~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ||||||...+.    .+.+.+.++|+++|++|+.|+++++|+++|.|++ ++++|+++|..+..                
T Consensus        89 lvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~----------------  152 (264)
T d1spxa_          89 LVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL----------------  152 (264)
T ss_dssp             EEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS----------------
T ss_pred             eecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc----------------
Confidence            99999986433    3455688999999999999999999999999975 47888888776521                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                             .+.+....|++||+|+.+|+++|+.|++++    |||||+|+||+++|+|....
T Consensus       153 -----------------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~V~PG~v~T~~~~~~  202 (264)
T d1spxa_         153 -----------------------HATPDFPYYSIAKAAIDQYTRNTAIDLIQH----GIRVNSISPGLVATGFGSAM  202 (264)
T ss_dssp             -----------------------SCCTTSHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCCCC----
T ss_pred             -----------------------ccCCCchhhhhhhhhHHHHHHHHHHHhccc----CeEEEEEeeCCCCCcchhcc
Confidence                                   244556889999999999999999999998    78899999999999987643

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.3e-37  Score=254.29  Aligned_cols=174  Identities=26%  Similarity=0.306  Sum_probs=151.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||+++|+.|+++ +..|++++|++++++++.+++.+            +|++|+++++++++++.+.+|+||+
T Consensus        10 VTGas~GIG~aia~~la~~-Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   88 (272)
T d1xkqa_          10 ITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDV   88 (272)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EeCcCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            7999999999999999999 56899999999999888777642            8999999999999999999999999


Q ss_pred             EEEccCCccccCCC----CCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCC-CccccccchHHHHHHhhhh
Q psy7994          69 LVNNAAIAFKVNSS----EPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSS-CGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        69 lv~~ag~~~~~~~~----~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~-~~~~~~~~~~~~~~~~~~~  142 (230)
                      ||||||...+.++.    +.+.+.|++++++|+.|+++++|+++|.|++ ++++|+++|. ++..               
T Consensus        89 lvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~---------------  153 (272)
T d1xkqa_          89 LVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ---------------  153 (272)
T ss_dssp             EEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS---------------
T ss_pred             EEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc---------------
Confidence            99999998765553    3556689999999999999999999999964 4677777665 4432               


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                               +.++...|++||+|+.+|++++|.|++++    |||||+|+||+|+|+|...
T Consensus       154 -------------------------~~~~~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~  201 (272)
T d1xkqa_         154 -------------------------AQPDFLYYAIAKAALDQYTRSTAIDLAKF----GIRVNSVSPGMVETGFTNA  201 (272)
T ss_dssp             -------------------------CCCSSHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCBCSSHHHH
T ss_pred             -------------------------CCCCcchhhhHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCcchhhhc
Confidence                                     45566899999999999999999999998    7889999999999998643

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.3e-37  Score=251.25  Aligned_cols=192  Identities=27%  Similarity=0.434  Sum_probs=150.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhh------cccCCCHHHHHHHHHHHHhhcC--CCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ------KLDILDKNSIKALHDHLEAEHG--GVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~------~~D~s~~~~v~~~~~~~~~~~~--~id~lv~   71 (230)
                      ||||++|||+++|++|+++|+. +|++++|+.+++++..+...      .+|++++++++++++++.+.++  +||+|||
T Consensus         8 ITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilin   87 (250)
T d1yo6a1           8 VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLIN   87 (250)
T ss_dssp             ESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence            7999999999999999999763 78899999999887665432      2899999999999999999876  4999999


Q ss_pred             ccCCccc-cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-------------CceEEEecCCCccccccchHHHHH
Q psy7994          72 NAAIAFK-VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-------------HGRVVNVSSSCGHLCHVTSEALKK  137 (230)
Q Consensus        72 ~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-------------~g~ii~~sS~~~~~~~~~~~~~~~  137 (230)
                      |||+..+ .++.+.+.+.|+++|++|+.|+++++++++|+|++             .++++++++..+.......     
T Consensus        88 nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~-----  162 (250)
T d1yo6a1          88 NAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS-----  162 (250)
T ss_dssp             CCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS-----
T ss_pred             cCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcc-----
Confidence            9998654 56778889999999999999999999999999853             2578888887664422211     


Q ss_pred             HhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         138 KLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                                  ..+..+...|++||+|+.+|+++++.|+++.    ||+||+|+||+|+|+|+
T Consensus       163 ----------------------------~~~~~~~~aY~aSKaal~~l~~~la~el~~~----gI~v~~i~PG~v~T~m~  210 (250)
T d1yo6a1         163 ----------------------------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDD----NVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             ----------------------------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEECCCC-----
T ss_pred             ----------------------------cccchhHHHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCCCCCCCC
Confidence                                        1233445789999999999999999999988    78899999999999999


Q ss_pred             CCCCCCCccccC
Q psy7994         218 SGKGPLTIDQDN  229 (230)
Q Consensus       218 ~~~~~~~~~~~a  229 (230)
                      +.....++|+++
T Consensus       211 ~~~~~~~~e~~a  222 (250)
T d1yo6a1         211 GKNAALTVEQST  222 (250)
T ss_dssp             --------HHHH
T ss_pred             CCCCCCCHHHHH
Confidence            888888888764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.7e-37  Score=253.35  Aligned_cols=173  Identities=23%  Similarity=0.263  Sum_probs=152.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||+++|+.|+++ +.+|++++|++++++++.+++.+            +|++|+++++++++++.+.||+||+
T Consensus         9 ITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   87 (274)
T d1xhla_           9 ITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDI   87 (274)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceE
Confidence            7999999999999999999 56899999999999888776642            8999999999999999999999999


Q ss_pred             EEEccCCccccC--CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          69 LVNNAAIAFKVN--SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        69 lv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +|||||......  ..+.+.+.|++++++|+.|+++++|+++|.|++  .++|+++||.++..                 
T Consensus        88 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-----------------  150 (274)
T d1xhla_          88 LVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-----------------  150 (274)
T ss_dssp             EEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-----------------
T ss_pred             EEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc-----------------
Confidence            999999764433  344677899999999999999999999999964  47888888877633                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                             +.++...|+++|+|+.+|+|++|.|++++    |||||+|+||+++|+|..
T Consensus       151 -----------------------~~~~~~~Y~asKaal~~ltk~lA~ela~~----gIrVN~I~PG~i~T~~~~  197 (274)
T d1xhla_         151 -----------------------AHSGYPYYACAKAALDQYTRCTAIDLIQH----GVRVNSVSPGAVATGFMG  197 (274)
T ss_dssp             -----------------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSSHHH
T ss_pred             -----------------------cCCCCceehhhhhHHHHHHHHHHHHHhHh----CCceeeeccCCCcCchhh
Confidence                                   45566899999999999999999999998    788999999999999754

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.3e-36  Score=249.59  Aligned_cols=176  Identities=28%  Similarity=0.394  Sum_probs=155.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhc-CCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEH-GGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~-~~id~lv   70 (230)
                      ||||++|||++++++|+++ +.+|++++|++++++++.+++.+         +|++++++++++++++.+.+ +++|+||
T Consensus        11 ITGas~GIG~aia~~la~~-G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idili   89 (258)
T d1ae1a_          11 VTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILV   89 (258)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEe
Confidence            7999999999999999999 55899999999999988877664         89999999999999999999 5899999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||.....++.+.+.++|++++++|+.++++++++++|.|+  +.|+||++||..+..                     
T Consensus        90 nnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~---------------------  148 (258)
T d1ae1a_          90 NNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS---------------------  148 (258)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS---------------------
T ss_pred             ccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc---------------------
Confidence            999999889999999999999999999999999999999885  458999999999843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                         +.+....|+++|+|+++|++.+++|+++.    |||||+|+||+++|+|.....
T Consensus       149 -------------------~~~~~~~Y~~sK~al~~lt~~lA~el~~~----gIrvN~I~PG~i~T~~~~~~~  198 (258)
T d1ae1a_         149 -------------------ALPSVSLYSASKGAINQMTKSLACEWAKD----NIRVNSVAPGVILTPLVETAI  198 (258)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBC--------
T ss_pred             -------------------ccccchhHHHHHHHHHHHHHHHHHhcCcC----cEEEEEEeeCcccCcchhhhh
Confidence                               55567999999999999999999999998    899999999999999976543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-37  Score=255.16  Aligned_cols=173  Identities=23%  Similarity=0.307  Sum_probs=155.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------------ccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------------LDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------------~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||++|||+++|++|+++ +..|++++|+.++++...+++..              +|++|+++++++++++.+.+|+|
T Consensus        17 ITGas~GIG~aia~~la~~-Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   95 (297)
T d1yxma1          17 VTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKI   95 (297)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCe
Confidence            7999999999999999999 56899999999998888776642              89999999999999999999999


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |+||||||.....++.+.+.++|++++++|+.|+++++++++|.|++  .++||++|+...                   
T Consensus        96 DiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-------------------  156 (297)
T d1yxma1          96 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-------------------  156 (297)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-------------------
T ss_pred             EEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-------------------
Confidence            99999999988888999999999999999999999999999999864  478988866433                   


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                            .+.++...|+++|+|+.+|++++|.|++++    |||||+|+||+|+|++...
T Consensus       157 ----------------------~~~~~~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~  205 (297)
T d1yxma1         157 ----------------------AGFPLAVHSGAARAGVYNLTKSLALEWACS----GIRINCVAPGVIYSQTAVE  205 (297)
T ss_dssp             ----------------------TCCTTCHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCCTGGGT
T ss_pred             ----------------------ccccccccchhHHHHHHHHHHHHHHHhccc----CceEEEeeeCcCcCcchhh
Confidence                                  134456899999999999999999999998    8999999999999998654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.3e-36  Score=248.09  Aligned_cols=187  Identities=26%  Similarity=0.414  Sum_probs=157.7

Q ss_pred             CCCCCCcHHHHHHHHHHHh--cCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHh--hcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQ--FDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEA--EHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~--g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~--~~~~id~   68 (230)
                      ||||++|||+++|+.|++.  .+..|++++|+++++++..+...        .+|++|+++++++++++..  .+++||+
T Consensus         7 ITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDi   86 (248)
T d1snya_           7 ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNV   86 (248)
T ss_dssp             ESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSE
T ss_pred             EeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcce
Confidence            7999999999999999752  26789999999998877654332        2899999999999998854  6789999


Q ss_pred             EEEccCCcccc-CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-------------CceEEEecCCCccccccchHH
Q psy7994          69 LVNNAAIAFKV-NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-------------HGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        69 lv~~ag~~~~~-~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-------------~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      ||||||+.... .+.+.+.++|++++++|+.|++.++++++|+|++             .++||+++|..+...      
T Consensus        87 LvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~------  160 (248)
T d1snya_          87 LFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ------  160 (248)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST------
T ss_pred             EEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC------
Confidence            99999986543 4667888999999999999999999999999853             479999999887542      


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                                     ..+.++...|++||+|+.+|+++++.++++.    ||+||+|+||+|+|
T Consensus       161 -------------------------------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~----gI~vn~v~PG~v~T  205 (248)
T d1snya_         161 -------------------------------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQ----RIMCVSLHPGWVKT  205 (248)
T ss_dssp             -------------------------------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEECCCSBCS
T ss_pred             -------------------------------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCC----CeEEEEcCCCcccC
Confidence                                           1123445799999999999999999999998    78899999999999


Q ss_pred             CCCCCCCCCCcccc
Q psy7994         215 DMSSGKGPLTIDQD  228 (230)
Q Consensus       215 ~~~~~~~~~~~~~~  228 (230)
                      +|.+...+..+++.
T Consensus       206 ~m~~~~~~~~~~~~  219 (248)
T d1snya_         206 DMGGSSAPLDVPTS  219 (248)
T ss_dssp             TTTCTTCSBCHHHH
T ss_pred             CcccccCCCCchHH
Confidence            99988877766543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.4e-37  Score=258.30  Aligned_cols=174  Identities=19%  Similarity=0.238  Sum_probs=153.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCc---------chhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA---------SRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~---------~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||+++|+.|+++| .+|++.+++.         +.++...+++..      +|++|.++++++++++.+.+|+
T Consensus        12 ITGas~GIG~aiA~~la~~G-a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~   90 (302)
T d1gz6a_          12 VTGAGGGLGRAYALAFAERG-ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGR   90 (302)
T ss_dssp             ETTTTSHHHHHHHHHHHHTT-CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSC
T ss_pred             EeCCCCHHHHHHHHHHHHcC-CEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCC
Confidence            79999999999999999994 5777776543         345555555543      8999999999999999999999


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      ||+||||||+..+.++.+.+.++|++++++|+.|+++++|+++|.|++  .|+||++||..+..                
T Consensus        91 iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~----------------  154 (302)
T d1gz6a_          91 IDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY----------------  154 (302)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------
T ss_pred             CCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC----------------
Confidence            999999999998899999999999999999999999999999999964  48999999998843                


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                              +.++...|++||+|+.+|+++|+.|++++    |||||+|+||++.|++...
T Consensus       155 ------------------------~~~~~~~Y~asKaal~~lt~~la~E~~~~----gIrVN~I~PG~~~t~~~~~  202 (302)
T d1gz6a_         155 ------------------------GNFGQANYSAAKLGLLGLANTLVIEGRKN----NIHCNTIAPNAGSRMTETV  202 (302)
T ss_dssp             ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEEECCSTTTGGG
T ss_pred             ------------------------CCCCcHHHHHHHHHHHHHHHHHHHHHhcc----CCceeeeCCCCCCcchhhc
Confidence                                    55567999999999999999999999998    8999999999998887554

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=6e-37  Score=251.83  Aligned_cols=182  Identities=24%  Similarity=0.362  Sum_probs=157.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++|++|+++ +..|++++|+.+++++..+++.+          +|++++++++++++++.+.+|+||+||
T Consensus        14 ITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   92 (260)
T d1h5qa_          14 VTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLI   92 (260)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEec
Confidence            7999999999999999999 56899999999988877666532          899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||||...+.++.+.+.++|++++++|+.|+++++++++|.|.   ..++|++++|..........               
T Consensus        93 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~---------------  157 (260)
T d1h5qa_          93 ANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS---------------  157 (260)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE---------------
T ss_pred             ccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc---------------
Confidence            999998888899999999999999999999999999999883   33688888877664322111               


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                        ..+.++...|+++|+|+.+|+++++.|++++    |||||+|+||+++|++....
T Consensus       158 ------------------~~~~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrvN~I~PG~i~T~~~~~~  208 (260)
T d1h5qa_         158 ------------------LNGSLTQVFYNSSKAACSNLVKGLAAEWASA----GIRVNALSPGYVNTDQTAHM  208 (260)
T ss_dssp             ------------------TTEECSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGGGS
T ss_pred             ------------------cccCccccchhhhhhhHHHHHHHHHHHhchh----CeEEeecCCCcccCcchhcc
Confidence                              1233456899999999999999999999998    89999999999999987654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=247.92  Aligned_cols=170  Identities=30%  Similarity=0.333  Sum_probs=152.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+++++++..+++..     +|++|+++++++++    ++++||+||||||.
T Consensus        12 ITGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~----~~g~iDilVnnAg~   86 (244)
T d1pr9a_          12 VTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAV   86 (244)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCCEEEECCCC
T ss_pred             EeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHH----HhCCceEEEecccc
Confidence            7999999999999999999 56899999999999988877764     89999999877664    57999999999999


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc-c--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL-R--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l-~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ....++.+.+.++|+++|++|+.++++++++++|.| +  +.|+||++||..+..                         
T Consensus        87 ~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~-------------------------  141 (244)
T d1pr9a_          87 ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-------------------------  141 (244)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-------------------------
T ss_pred             ccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc-------------------------
Confidence            988999999999999999999999999999999965 3  348999999998844                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     +.++...|++||+|+.+|++++|.|++++    |||||+|+||+++|+|.+.
T Consensus       142 ---------------~~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrvN~I~PG~v~T~~~~~  189 (244)
T d1pr9a_         142 ---------------AVTNHSVYCSTKGALDMLTKVMALELGPH----KIRVNAVNPTVVMTSMGQA  189 (244)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSHHHHT
T ss_pred             ---------------cccchhhhhhhHHHHHHHHHHHHHHhCCC----cEEEEEEeeCcCcChHHhh
Confidence                           45566899999999999999999999998    7999999999999998654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.4e-36  Score=245.70  Aligned_cols=170  Identities=28%  Similarity=0.265  Sum_probs=152.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      ||||++|||+++|++|+++ +..|++++|+++++++..+++..     +|++|+++++++++    ++|+||+||||||.
T Consensus        10 ITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDilVnnAg~   84 (242)
T d1cyda_          10 VTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAAL   84 (242)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCSEEEECCCC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHH----HcCCCeEEEECCcc
Confidence            7999999999999999999 56899999999998888777654     89999999877664    57999999999999


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ....++.+.+.++|+++|++|+.|+++++|+++|.|.   .+|+||+++|..+..                         
T Consensus        85 ~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-------------------------  139 (242)
T d1cyda_          85 VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-------------------------  139 (242)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-------------------------
T ss_pred             ccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc-------------------------
Confidence            8888999999999999999999999999999999753   348999999998843                         


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                     +.++...|+++|+|+.+|+|+++.|++++    |||||+|+||+++|+|.+.
T Consensus       140 ---------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~----gIrvN~I~PG~i~T~~~~~  187 (242)
T d1cyda_         140 ---------------TFPNLITYSSTKGAMTMLTKAMAMELGPH----KIRVNSVNPTVVLTDMGKK  187 (242)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBTTHHHHH
T ss_pred             ---------------cCCccccccchHHHHHHHHHHHHHHhCcc----CeecccCCCCCccCHHHHh
Confidence                           45567899999999999999999999998    8999999999999998653

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.3e-36  Score=250.31  Aligned_cols=172  Identities=22%  Similarity=0.246  Sum_probs=150.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+++++++..+++..      +|++++++++++++++.+.++++|++|||||
T Consensus        10 ITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG   88 (276)
T d1bdba_          10 ITGGASGLGRALVDRFVAE-GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAG   88 (276)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccccccccc
Confidence            7999999999999999999 56899999999988887766543      8999999999999999999999999999999


Q ss_pred             CccccC-----CCCCChhHHHHHHHHhhhhHHHHHHHhccccc-CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          75 IAFKVN-----SSEPFGSQALHTMRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        75 ~~~~~~-----~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~-~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ......     ..+.+.+.|+++|++|+.|+++++|+++|.|+ ++|+||+++|..+..                     
T Consensus        89 ~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~---------------------  147 (276)
T d1bdba_          89 IWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFY---------------------  147 (276)
T ss_dssp             CCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS---------------------
T ss_pred             ccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhcc---------------------
Confidence            864332     23344567999999999999999999999996 468999999988843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                         +.++...|++||+|+.+|+|++|.|+++.     ||||+|+||+|+|+|..
T Consensus       148 -------------------~~~~~~~Y~asKaal~~ltr~lA~ela~~-----IrVN~I~PG~i~T~~~~  193 (276)
T d1bdba_         148 -------------------PNGGGPLYTAAKHAIVGLVRELAFELAPY-----VRVNGVGSGGINSDLRG  193 (276)
T ss_dssp             -------------------TTSSCHHHHHHHHHHHHHHHHHHHHHTTT-----CEEEEEEECCCCSCCCC
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHhhcc-----eEEcccCCCCEecCcCC
Confidence                               45566899999999999999999999864     88999999999999864

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=249.91  Aligned_cols=179  Identities=25%  Similarity=0.322  Sum_probs=157.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++|+.|+++ +.+|++++|++++++++.+++.+           ||++++++++++++++.+.+++||+|
T Consensus        15 ITGas~GIG~aiA~~la~~-G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~l   93 (257)
T d1xg5a_          15 VTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDIC   93 (257)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            7999999999999999999 55899999999999988777653           89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC----CceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |||||...+.++.+.+.+.|++.+++|+.++++++++++|.|++    +|+||++||..+...                 
T Consensus        94 VnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----------------  156 (257)
T d1xg5a_          94 INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-----------------  156 (257)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC-----------------
T ss_pred             EecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC-----------------
Confidence            99999998899999999999999999999999999999998752    489999999988431                 


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                           .|......|+++|+|+.+|+++|+.||....  .||+||+|+||+++|++....
T Consensus       157 ---------------------~p~~~~~~Y~~sKaal~~ltr~la~el~~~~--~~I~vn~i~PG~i~t~~~~~~  208 (257)
T d1xg5a_         157 ---------------------LPLSVTHFYSATKYAVTALTEGLRQELREAQ--THIRATCISPGVVETQFAFKL  208 (257)
T ss_dssp             ---------------------CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTT--CCCEEEEEEESCBCSSHHHHH
T ss_pred             ---------------------CCCcccHHHHHHHHHHHhCHHHHHHHHHhCC--CCEEEEEEeCCCCCChhhhhc
Confidence                                 1233447799999999999999999994322  269999999999999986543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.7e-36  Score=248.99  Aligned_cols=174  Identities=25%  Similarity=0.300  Sum_probs=154.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||++|||+++|++|+++|+.+++..+++++.++...+++.+         +|++|+++++.+++++.+++++||++||
T Consensus        11 ITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilin   90 (259)
T d1ja9a_          11 TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMS   90 (259)
T ss_dssp             ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEEC
T ss_pred             EeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEe
Confidence            7999999999999999999554444456677777777777654         8999999999999999999999999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      |||.....++.+.+.+.|++++++|+.++++++|+++|.|++++++++++|..+..                        
T Consensus        91 nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~------------------------  146 (259)
T d1ja9a_          91 NSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM------------------------  146 (259)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC------------------------
T ss_pred             ccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccc------------------------
Confidence            99998888899999999999999999999999999999999999999998876632                        


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                     .+.+++..|+++|+|+.+|+|+|+.|+++.    |||||+|+||+++|+|.
T Consensus       147 ---------------~~~~~~~~Y~asK~al~~l~r~lA~e~~~~----gIrvN~I~PG~i~T~~~  193 (259)
T d1ja9a_         147 ---------------TGIPNHALYAGSKAAVEGFCRAFAVDCGAK----GVTVNCIAPGGVKTDMF  193 (259)
T ss_dssp             ---------------CSCCSCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHH
T ss_pred             ---------------cCCCCchhHHHHHHHHHHHHHHHHHHHhhc----CeEEeccCcCCccChhh
Confidence                           245567999999999999999999999998    78899999999999874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2.4e-36  Score=245.54  Aligned_cols=175  Identities=25%  Similarity=0.262  Sum_probs=155.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+.+++++..+++..      +|++++++++++++++.+.+|+||++|||||
T Consensus        10 ItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg   88 (241)
T d2a4ka1          10 VTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAG   88 (241)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGG
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccc
Confidence            7999999999999999999 66899999999999888887754      8999999999999999999999999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      .....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+++||.+....                          
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~--------------------------  142 (241)
T d2a4ka1          89 VAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA--------------------------  142 (241)
T ss_dssp             GTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH--------------------------
T ss_pred             cccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc--------------------------
Confidence            988899999999999999999999999999999999998888888877665331                          


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG  221 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~~  221 (230)
                                     ++...|+++|+|+++|++++++|++++    |||||+|+||+++|+|.....
T Consensus       143 ---------------~~~~~Y~~sK~al~~lt~~lA~el~~~----gIrvN~I~PG~v~T~~~~~~~  190 (241)
T d2a4ka1         143 ---------------FGLAHYAAGKLGVVGLARTLALELARK----GVRVNVLLPGLIQTPMTAGLP  190 (241)
T ss_dssp             ---------------HHHHHHHHCSSHHHHHHHHHHHHHTTT----TCEEEEEEECSBCCGGGTTSC
T ss_pred             ---------------cCccccchhhHHHHHHHHHHHHHHhHh----CCEEeeeccCcCCCHHHHhhh
Confidence                           233789999999999999999999998    788999999999999976543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-36  Score=247.28  Aligned_cols=166  Identities=24%  Similarity=0.377  Sum_probs=148.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++|+.|+++ +.+|++++|+.+++++..+++.+           +|++++++++++++++.+.+|+||+|
T Consensus         8 ITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   86 (254)
T d2gdza1           8 VTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDIL   86 (254)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCee
Confidence            7999999999999999999 56899999999998888776642           89999999999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |||||..        ..++|++++++|+.++++++++++|.|++     .|+||++||.++..                 
T Consensus        87 VnnAg~~--------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~-----------------  141 (254)
T d2gdza1          87 VNNAGVN--------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------------  141 (254)
T ss_dssp             EECCCCC--------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------------
T ss_pred             ccccccc--------ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc-----------------
Confidence            9999985        34569999999999999999999999864     27899999999844                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHH--HHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFL--QHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~--la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                             +.++...|++||+|+.+|+|+  |+.|+++.    |||||+|+||+|+|+|.+.
T Consensus       142 -----------------------~~~~~~~Y~asKaal~~ltrs~ala~e~~~~----gIrVN~I~PG~i~T~~~~~  191 (254)
T d2gdza1         142 -----------------------PVAQQPVYCASKHGIVGFTRSAALAANLMNS----GVRLNAICPGFVNTAILES  191 (254)
T ss_dssp             -----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTC----CEEEEEEEESCBSSHHHHG
T ss_pred             -----------------------CCCCccchHHHHHHHHHHHHHHHHHHHhcCC----CEEEEEEEcCCCCChhhhh
Confidence                                   556678999999999999997  68899997    8999999999999998654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-35  Score=247.54  Aligned_cols=174  Identities=25%  Similarity=0.314  Sum_probs=145.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC--eEEEEecCcchhH---HHHHhhh---------cccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG--IIYLTARDASRGQ---EALEKLQ---------KLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~--~vi~~~r~~~~~~---~~~~~~~---------~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||++|||+++|+.|+++|..  .|..+.|+.+..+   +..+.+.         .+|++|+++++++++++.+  +++
T Consensus         7 ITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--g~i   84 (285)
T d1jtva_           7 ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE--GRV   84 (285)
T ss_dssp             ESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT--SCC
T ss_pred             EccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc--cch
Confidence            7999999999999999999665  3445566655443   3333332         2899999999999998754  899


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |+||||+|.....++.+.+.+.|++++++|+.|+++++++++|.|++  .|+||++||.++..                 
T Consensus        85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~-----------------  147 (285)
T d1jtva_          85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-----------------  147 (285)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS-----------------
T ss_pred             hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC-----------------
Confidence            99999999998888999999999999999999999999999999963  58999999999944                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                             +.+....|++||+|+.+|+++|+.|++++    ||+||+|+||+|+|+|.+..
T Consensus       148 -----------------------~~~~~~~Y~asKaal~~l~~~la~El~~~----gIrVn~V~PG~v~T~~~~~~  196 (285)
T d1jtva_         148 -----------------------GLPFNDVYCASKFALEGLCESLAVLLLPF----GVHLSLIECGPVHTAFMEKV  196 (285)
T ss_dssp             -----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCC------
T ss_pred             -----------------------CCCCchHHHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCCCCChHHHHh
Confidence                                   55567899999999999999999999998    88999999999999998764

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1e-35  Score=243.59  Aligned_cols=167  Identities=19%  Similarity=0.221  Sum_probs=141.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----------cccCC-CHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDIL-DKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----------~~D~s-~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||++|||+++|++|+++|+ +|++++|+.++.+...+...          .+|++ +.++++++++++.+.+++||+|
T Consensus        10 ITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDil   88 (254)
T d1sbya1          10 FVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDIL   88 (254)
T ss_dssp             EETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            799999999999999999955 55555555555544432211          18998 6778999999999999999999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-----CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-----HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      |||||.        .+.+.|++++++|+.|++.++++++|.|++     .|+||++||..+..                 
T Consensus        89 vnnAG~--------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~-----------------  143 (254)
T d1sbya1          89 INGAGI--------LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-----------------  143 (254)
T ss_dssp             EECCCC--------CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------------
T ss_pred             EeCCCC--------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc-----------------
Confidence            999996        356889999999999999999999999953     37999999999844                 


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                             +.++...|++||+|+.+|+++|+.++.+.    |||||+|+||+|+|+|.+.+
T Consensus       144 -----------------------~~~~~~~Y~asKaal~~~t~~la~el~~~----gIrVn~I~PG~v~T~~~~~~  192 (254)
T d1sbya1         144 -----------------------AIHQVPVYSASKAAVVSFTNSLAKLAPIT----GVTAYSINPGITRTPLVHTF  192 (254)
T ss_dssp             -----------------------CCTTSHHHHHHHHHHHHHHHHHHHHHHHH----SEEEEEEEECSEESHHHHSC
T ss_pred             -----------------------CCCCCHHHHHHHHHHHHHHHHHHhhcccc----CeEEEEEEeCCCcCcccccc
Confidence                                   55567899999999999999999999998    89999999999999986544

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3e-35  Score=243.08  Aligned_cols=173  Identities=18%  Similarity=0.240  Sum_probs=153.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++|+.|+++ +.+|++++++ ++.++...+++.+         +|++|+++++++++++.+.+++||++|
T Consensus        23 ITGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV  101 (272)
T d1g0oa_          23 VTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVC  101 (272)
T ss_dssp             ETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccc
Confidence            7999999999999999999 5566666665 5666666666554         899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      ||+|.....++.+.+.+.|++++++|+.++++++++++|.|++++++++++|..+..                       
T Consensus       102 ~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~-----------------------  158 (272)
T d1g0oa_         102 SNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA-----------------------  158 (272)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC-----------------------
T ss_pred             cccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc-----------------------
Confidence            999998888889999999999999999999999999999999999999999887632                       


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                      .+.++...|+++|+|+.+|+|++|.|++++    |||||+|+||+++|+|.
T Consensus       159 ----------------~~~~~~~~Y~asKaal~~ltk~lA~e~~~~----gIrVN~I~PG~v~T~~~  205 (272)
T d1g0oa_         159 ----------------KAVPKHAVYSGSKGAIETFARCMAIDMADK----KITVNVVAPGGIKTDMY  205 (272)
T ss_dssp             ----------------SSCSSCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHH
T ss_pred             ----------------ccccchhhHHHHHHHHHHHHHHHHHHhchh----CeEEEEEccCCcCChHH
Confidence                            234455889999999999999999999998    78899999999999874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.6e-35  Score=240.49  Aligned_cols=175  Identities=20%  Similarity=0.231  Sum_probs=145.3

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--------cccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--------~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|  |||+++|++|+++ +.+|++++|+++..+...+...        .+|++|+++++++++++.+.+++||+||
T Consensus        13 ITGas~~~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilV   91 (256)
T d1ulua_          13 VMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLV   91 (256)
T ss_dssp             EESCCCSSSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEE
T ss_pred             EECCCCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceEEE
Confidence            799886  9999999999999 5578888888655444332222        2899999999999999999999999999


Q ss_pred             EccCCccc----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          71 NNAAIAFK----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        71 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      ||||....    ..+.+.+.++|++++++|+.+++.++++++|.|+++|+||++||..+..                   
T Consensus        92 nnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~-------------------  152 (256)
T d1ulua_          92 HAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-------------------  152 (256)
T ss_dssp             ECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-------------------
T ss_pred             eccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC-------------------
Confidence            99998642    3456778889999999999999999999999999999999999998843                   


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                           +.++...|+++|+|+.+|++++|.|++++    |||||+|+||+++|++....
T Consensus       153 ---------------------~~~~~~~Y~asKaal~~ltr~lA~ela~~----gIrVN~I~PG~i~t~~~~~~  201 (256)
T d1ulua_         153 ---------------------VVPKYNVMAIAKAALEASVRYLAYELGPK----GVRVNAISAGPVRTVAARSI  201 (256)
T ss_dssp             ---------------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCC--------
T ss_pred             ---------------------CCCCchHHHHHHHHHHHHHHHHHHHhccc----CCEEeeeccceeeeccccch
Confidence                                 45566899999999999999999999998    78899999999999987654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.7e-35  Score=239.60  Aligned_cols=168  Identities=20%  Similarity=0.218  Sum_probs=148.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||++|||+++|+.|+++ +..|++++|+++.+++...++..+|+++.      ++++.+.+++||+||||||.....+
T Consensus         9 VTGas~GIG~aia~~l~~~-Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~~~~~   81 (234)
T d1o5ia_           9 VLAASRGIGRAVADVLSQE-GAEVTICARNEELLKRSGHRYVVCDLRKD------LDLLFEKVKEVDILVLNAGGPKAGF   81 (234)
T ss_dssp             EESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHTCSEEEECCTTTC------HHHHHHHSCCCSEEEECCCCCCCBC
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHhcCCcEEEcchHHH------HHHHHHHhCCCcEEEecccccCCcc
Confidence            7999999999999999999 56899999998887766656666899864      4455667899999999999988888


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccC--CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE  158 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (230)
                      +.+.+.++|++++++|+.++++++|+++|.|++  .|+||+++|..+..                               
T Consensus        82 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~-------------------------------  130 (234)
T d1o5ia_          82 FDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-------------------------------  130 (234)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------------------------
T ss_pred             hhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc-------------------------------
Confidence            899999999999999999999999999999964  48999999987743                               


Q ss_pred             HhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                               +.++...|+++|+|+.+|+|++|.|++++    |||||+|+||+++|++...
T Consensus       131 ---------~~~~~~~Y~asKaal~~ltk~lA~ela~~----gIrVN~I~PG~v~T~~~~~  178 (234)
T d1o5ia_         131 ---------PIENLYTSNSARMALTGFLKTLSFEVAPY----GITVNCVAPGWTETERVKE  178 (234)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTHHH
T ss_pred             ---------cccccccchhHHHHHHHHHHHHHHHhccc----CeEEeecccCccchhhhhh
Confidence                     45566999999999999999999999998    8999999999999998653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-34  Score=239.46  Aligned_cols=175  Identities=21%  Similarity=0.261  Sum_probs=159.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      |||||+|||+++|++|+++ +..|++++|+.+++++..+++..          +|+++.+.+..+++++.+.++.+|+++
T Consensus        19 ITGassGIG~aiA~~la~~-G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li   97 (269)
T d1xu9a_          19 VTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLI   97 (269)
T ss_dssp             ESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccc
Confidence            7999999999999999999 57899999999999988776543          899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-CceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      ||+|......+.+.+.+.|++++++|+.|++.+++.++|.|++ +|+||++||.++..                      
T Consensus        98 ~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~----------------------  155 (269)
T d1xu9a_          98 LNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV----------------------  155 (269)
T ss_dssp             ECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS----------------------
T ss_pred             cccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcC----------------------
Confidence            9999988888888999999999999999999999999999974 68999999999843                      


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                        +.++...|++||+|+.+|+++|+.|+++.+.  ||+||+|+||+|+|+|.+
T Consensus       156 ------------------~~p~~~~Y~asKaal~~~~~~La~El~~~~~--~I~V~~v~PG~v~T~~~~  204 (269)
T d1xu9a_         156 ------------------AYPMVAAYSASKFALDGFFSSIRKEYSVSRV--NVSITLCVLGLIDTETAM  204 (269)
T ss_dssp             ------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTC--CCEEEEEEECCBCCHHHH
T ss_pred             ------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCC--CEEEEEEecCcCCCcHHH
Confidence                              5667799999999999999999999987633  499999999999999854

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-34  Score=235.80  Aligned_cols=172  Identities=21%  Similarity=0.168  Sum_probs=149.5

Q ss_pred             CCCCCCcHHHHHHHHHHHh--cCCeEEEEecCcchhHHHHHhhhc-----------ccCCCHHHHHHHHHHHHhh----c
Q psy7994           1 VTGANKGIGYGIVKGLIQQ--FDGIIYLTARDASRGQEALEKLQK-----------LDILDKNSIKALHDHLEAE----H   63 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~--g~~~vi~~~r~~~~~~~~~~~~~~-----------~D~s~~~~v~~~~~~~~~~----~   63 (230)
                      ||||++|||+++|++|++.  -+..|++++|+.++++++.+++..           ||++++++++++++++.+.    +
T Consensus        11 ITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~   90 (259)
T d1oaaa_          11 LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEG   90 (259)
T ss_dssp             ESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTT
T ss_pred             EeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhcc
Confidence            7999999999999999973  267999999999999988777642           8999999999999998763    4


Q ss_pred             CCCcEEEEccCCcc---ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC----ceEEEecCCCccccccchHHHH
Q psy7994          64 GGVDVLVNNAAIAF---KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH----GRVVNVSSSCGHLCHVTSEALK  136 (230)
Q Consensus        64 ~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~----g~ii~~sS~~~~~~~~~~~~~~  136 (230)
                      +.+|++|||||...   ..++.+.+.+.|+++|++|+.|+++++++++|+|+++    ++||++||.++..         
T Consensus        91 ~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~---------  161 (259)
T d1oaaa_          91 LQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ---------  161 (259)
T ss_dssp             CCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS---------
T ss_pred             CceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC---------
Confidence            57899999999864   3446778889999999999999999999999999753    6999999998843         


Q ss_pred             HHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         137 KKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                                     +.+++..|++||+|+.+|+++|+.|  ..    |||||+|+||+|+|+|
T Consensus       162 -------------------------------~~~~~~~Y~asKaal~~lt~~la~e--~~----gIrVn~v~PG~i~T~~  204 (259)
T d1oaaa_         162 -------------------------------PYKGWGLYCAGKAARDMLYQVLAAE--EP----SVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             -------------------------------CCTTCHHHHHHHHHHHHHHHHHHHH--CT----TEEEEEEECCSBSSHH
T ss_pred             -------------------------------CCccchHHHHHHHHHHHHHHHHHhC--CC----CCEEEEEEcCCCCCHH
Confidence                                           5566799999999999999999998  33    7999999999999998


Q ss_pred             CC
Q psy7994         217 SS  218 (230)
Q Consensus       217 ~~  218 (230)
                      .+
T Consensus       205 ~~  206 (259)
T d1oaaa_         205 QQ  206 (259)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-33  Score=228.75  Aligned_cols=170  Identities=25%  Similarity=0.277  Sum_probs=145.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||++|||+++++.|+++ +.+|++++|+++++++..+....    +|+.+.+.++.    ..+.++++|+||||+|..
T Consensus        11 ITGas~GIG~aia~~la~~-G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~id~lVn~ag~~   85 (245)
T d2ag5a1          11 LTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQ----FANEVERLDVLFNVAGFV   85 (245)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHH----HHHHCSCCSEEEECCCCC
T ss_pred             EeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccc----cccccccceeEEeccccc
Confidence            7999999999999999999 56899999998877665443222    67776655554    455678999999999999


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--CCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMN  154 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
                      ...++.+.+.+.|++.+++|+.+++.++++++|.|.  +.|+||+++|..+..                           
T Consensus        86 ~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---------------------------  138 (245)
T d2ag5a1          86 HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---------------------------  138 (245)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT---------------------------
T ss_pred             CCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc---------------------------
Confidence            888899999999999999999999999999999885  458999999987732                           


Q ss_pred             HHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCC
Q psy7994         155 EFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS  218 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~  218 (230)
                                  .+..+...|+++|+|+++|+|++|.|++++    |||||+|+||+++|++.+
T Consensus       139 ------------~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~----gIrvN~I~PG~i~T~~~~  186 (245)
T d2ag5a1         139 ------------KGVVNRCVYSTTKAAVIGLTKSVAADFIQQ----GIRCNCVCPGTVDTPSLQ  186 (245)
T ss_dssp             ------------BCCTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCEECHHHH
T ss_pred             ------------CCccchhHHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEeeceeechhhH
Confidence                        244566899999999999999999999998    899999999999998754

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-32  Score=222.82  Aligned_cols=176  Identities=21%  Similarity=0.288  Sum_probs=151.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      ||||++|||+++|++|+++ +.+|++++|+.++++...+++..      +|+.+.+.++....++...+..+|.+++|++
T Consensus        10 ITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (248)
T d2o23a1          10 ITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAG   88 (248)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999999 55899999999999988887754      8999999999999999999999999999988


Q ss_pred             Ccccc------CCCCCChhHHHHHHHHhhhhHHHHHHHhccccc--------CCceEEEecCCCccccccchHHHHHHhh
Q psy7994          75 IAFKV------NSSEPFGSQALHTMRTNYFALIDVCDILFPLLR--------SHGRVVNVSSSCGHLCHVTSEALKKKLL  140 (230)
Q Consensus        75 ~~~~~------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~--------~~g~ii~~sS~~~~~~~~~~~~~~~~~~  140 (230)
                      .....      +..+.+.+.|++++++|+.+++++++++.|.|.        +.|+||++||..+..             
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-------------  155 (248)
T d2o23a1          89 IAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-------------  155 (248)
T ss_dssp             CCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-------------
T ss_pred             cccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc-------------
Confidence            76433      345567789999999999999999999999763        247999999998843             


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         141 HEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                                 +.+++..|+++|+|+.+|+++|+.|++++    |||||+|+||+++|+|....
T Consensus       156 ---------------------------~~~~~~~Y~asKaal~~lt~~la~e~~~~----gIrvN~I~PG~i~T~~~~~~  204 (248)
T d2o23a1         156 ---------------------------GQVGQAAYSASKGGIVGMTLPIARDLAPI----GIRVMTIAPGLFGTPLLTSL  204 (248)
T ss_dssp             ---------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCC-----
T ss_pred             ---------------------------CCCCchHHHHHHHHHHHHHHHHHHHhccc----CcceeeeccCceecchhhcC
Confidence                                       55667999999999999999999999998    89999999999999997754


Q ss_pred             C
Q psy7994         221 G  221 (230)
Q Consensus       221 ~  221 (230)
                      .
T Consensus       205 ~  205 (248)
T d2o23a1         205 P  205 (248)
T ss_dssp             -
T ss_pred             C
Confidence            3

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.98  E-value=4.1e-32  Score=226.31  Aligned_cols=175  Identities=17%  Similarity=0.153  Sum_probs=150.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++|||+++|++|+++ +.+|++++|+.+++++..+++..          +|++++++++.+++.+.+.++++|++|
T Consensus        30 ITGas~GIG~aiA~~la~~-Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilv  108 (294)
T d1w6ua_          30 ITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVI  108 (294)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEE
T ss_pred             EeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhh
Confidence            7999999999999999999 57899999999988887776643          899999999999999999999999999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecCCCccccccchHHHHHHhhhhchhHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVE  147 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  147 (230)
                      ||||......+...+.++|++++.+|+.+.+.+++...+.+.   ..+.+++++|..+..                    
T Consensus       109 nnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~--------------------  168 (294)
T d1w6ua_         109 NNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--------------------  168 (294)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--------------------
T ss_pred             hhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh--------------------
Confidence            999998888888899999999999999999999988877553   346788888877633                    


Q ss_pred             HHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         148 ELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                          +.++...|+++|+|+.+|+|++|.+++++    |||||+|+||+++|++....
T Consensus       169 --------------------~~~~~~~YsasKaal~~ltk~lA~ela~~----gIrVN~I~PG~i~T~~~~~~  217 (294)
T d1w6ua_         169 --------------------GSGFVVPSASAKAGVEAMSKSLAAEWGKY----GMRFNVIQPGPIKTKGAFSR  217 (294)
T ss_dssp             --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCC------
T ss_pred             --------------------cccccchHHHHHHHHHHHHHHHHHHHhHh----CeEEEEEccCccccchhhhc
Confidence                                34455889999999999999999999998    89999999999999987654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=1.3e-31  Score=226.79  Aligned_cols=174  Identities=13%  Similarity=0.255  Sum_probs=143.9

Q ss_pred             CCC--CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh----h---------------------------------
Q psy7994           1 VTG--ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK----L---------------------------------   41 (230)
Q Consensus         1 ItG--~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~----~---------------------------------   41 (230)
                      |||  +++|||+++|+.|+++ +.+|+++.+...........    +                                 
T Consensus         7 ITGaa~s~GIG~aiA~~la~~-GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (329)
T d1uh5a_           7 IAGIGDTNGYGWGIAKELSKR-NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEE   85 (329)
T ss_dssp             EECCSSSSSHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHH
T ss_pred             EeCCCCCChHHHHHHHHHHHc-CCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchh
Confidence            799  6689999999999999 55777777665433222110    0                                 


Q ss_pred             ----hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCc
Q psy7994          42 ----QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHG  115 (230)
Q Consensus        42 ----~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g  115 (230)
                          ..+|+++.++++.+++++.+.||+||+||||+|...  .+++.+.+.+.|++++++|++|.+.++|+++|+|+++|
T Consensus        86 ~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~G  165 (329)
T d1uh5a_          86 TKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQS  165 (329)
T ss_dssp             HHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccccc
Confidence                014788999999999999999999999999999764  35677889999999999999999999999999999999


Q ss_pred             eEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCC-CchhhHHHHHHHHHHHHHHHhhh
Q psy7994         116 RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP-NSAYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       116 ~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~  194 (230)
                      +||++||.++..                                        +.++ ...|+++|+|+++|+|+||.||+
T Consensus       166 sIv~iss~~~~~----------------------------------------~~p~y~~~y~asKaal~~ltr~lA~Ela  205 (329)
T d1uh5a_         166 SIISLTYHASQK----------------------------------------VVPGYGGGMSSAKAALESDTRVLAYHLG  205 (329)
T ss_dssp             EEEEEECGGGTS----------------------------------------CCTTCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeehhcc----------------------------------------cccccchhhhhhhccccccchhhHHHHh
Confidence            999999988743                                        3333 35799999999999999999998


Q ss_pred             h-hhccCCeEEEEecCCccccCCCCC
Q psy7994         195 Q-DAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       195 ~-~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                      + .    |||||+|+||+|+|++.+.
T Consensus       206 ~~~----gIRVNaI~PG~i~T~a~~~  227 (329)
T d1uh5a_         206 RNY----NIRINTISAGPLKSRAATA  227 (329)
T ss_dssp             HHH----CCEEEEEEECCCCCTTGGG
T ss_pred             ccc----CcEEEEEecCcccchhhhc
Confidence            6 5    7889999999999965443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.97  E-value=6.3e-31  Score=217.50  Aligned_cols=171  Identities=19%  Similarity=0.124  Sum_probs=136.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------------------------ccCCCHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------------------------LDILDKNSIK   53 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------------------------~D~s~~~~v~   53 (230)
                      ||||++|||+++|+.|+++|+.+++...|+.+.++...+++..                           +|++++++++
T Consensus         7 ITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~   86 (284)
T d1e7wa_           7 VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCA   86 (284)
T ss_dssp             ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHH
T ss_pred             EeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHH
Confidence            7999999999999999999554444455566666666555431                           6799999999


Q ss_pred             HHHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHH--------------HHHHHhhhhHHHHHHHhcccc------cC
Q psy7994          54 ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL--------------HTMRTNYFALIDVCDILFPLL------RS  113 (230)
Q Consensus        54 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~g~~~l~~~~~~~l------~~  113 (230)
                      ++++++.+.+|+||+||||||...+.++.+.+.+.|+              ..|.+|+.+++++++.+.+.+      ++
T Consensus        87 ~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~  166 (284)
T d1e7wa_          87 ELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHR  166 (284)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGS
T ss_pred             HHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhc
Confidence            9999999999999999999999887777776665544              478999999999999877643      32


Q ss_pred             --CceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHH
Q psy7994         114 --HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHA  191 (230)
Q Consensus       114 --~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~  191 (230)
                        .++||+++|..+..                                        +.++...|+++|+|+.+|++++|.
T Consensus       167 ~~~~~ii~~~s~~~~~----------------------------------------~~~~~~~Y~asKaal~~lt~~lA~  206 (284)
T d1e7wa_         167 GTNYSIINMVDAMTNQ----------------------------------------PLLGYTIYTMAKGALEGLTRSAAL  206 (284)
T ss_dssp             CSCEEEEEECCTTTTS----------------------------------------CCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccccccccccC----------------------------------------CccceeeeccccccchhhhHHHHH
Confidence              36899999887733                                        556679999999999999999999


Q ss_pred             hhhhhhccCCeEEEEecCCccccC
Q psy7994         192 LLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       192 ~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                      ||+++    |||||+|+||++.+.
T Consensus       207 el~~~----gIrvN~I~PG~t~~~  226 (284)
T d1e7wa_         207 ELAPL----QIRVNGVGPGLSVLV  226 (284)
T ss_dssp             HHGGG----TEEEEEEEESSBCCG
T ss_pred             HhCCc----ccccccccccccccc
Confidence            99998    899999999986544

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2e-32  Score=221.53  Aligned_cols=175  Identities=13%  Similarity=0.024  Sum_probs=143.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcC--CCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHG--GVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~--~id~lv~~ag~~~~   78 (230)
                      ||||++|||+++++.|+++ +..|+++++....... ......+|.++.++++.+..++.+.++  +||+||||||....
T Consensus         7 ITGas~GIG~a~a~~l~~~-G~~V~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~   84 (236)
T d1dhra_           7 VYGGRGALGSRCVQAFRAR-NWWVASIDVVENEEAS-ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAG   84 (236)
T ss_dssp             EETTTSHHHHHHHHHHHTT-TCEEEEEESSCCTTSS-EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCcccccc-ccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCccccc
Confidence            7999999999999999999 5577777776543211 112233788888888888888877654  79999999997544


Q ss_pred             -cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          79 -VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        79 -~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                       ....+.+.+.|+++|++|+.++++++++++|+|+++|+||++||.++..                              
T Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------------------------  134 (236)
T d1dhra_          85 GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD------------------------------  134 (236)
T ss_dssp             BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------------------
T ss_pred             ccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC------------------------------
Confidence             3455666789999999999999999999999999999999999998843                              


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                +.++...|++||+|+.+|+++|+.|++...  .||+||+|+||+++|+|.+.
T Consensus       135 ----------~~~~~~~Y~asKaal~~lt~~la~El~~~~--~gI~vn~v~PG~v~T~~~~~  184 (236)
T d1dhra_         135 ----------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMP--SGAAAIAVLPVTLDTPMNRK  184 (236)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCC--TTCEEEEEEESCEECHHHHH
T ss_pred             ----------CccCCcccHHHHHHHHHHHHHHHHHhccCC--CcEEEEEEEeccCcCCcchh
Confidence                      555679999999999999999999998311  17999999999999998654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=2.7e-32  Score=220.60  Aligned_cols=176  Identities=14%  Similarity=0.041  Sum_probs=142.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHh--hcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEA--EHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~--~~~~id~lv~~ag~~~~   78 (230)
                      ||||++|||++++++|+++ +..|++++|++.+.... .....+|+.+.++.....+.+..  .+++||+||||||....
T Consensus         7 ITGas~GIG~aia~~l~~~-G~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~   84 (235)
T d1ooea_           7 VYGGKGALGSAILEFFKKN-GYTVLNIDLSANDQADS-NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAG   84 (235)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TEEEEEEESSCCTTSSE-EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCchhcccc-cceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCccccc
Confidence            7999999999999999999 56888899987643211 11223677777777766666665  45899999999998654


Q ss_pred             cC-CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          79 VN-SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        79 ~~-~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      .. +.+.+.+.|+.++++|+.+++.++++++|+|+++|+||++||..+..                              
T Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~------------------------------  134 (235)
T d1ooea_          85 GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------------------------------  134 (235)
T ss_dssp             BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------------------
T ss_pred             ccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC------------------------------
Confidence            33 44455688999999999999999999999999999999999998843                              


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                +.++...|++||+|+.+|+++|+.|++..+.  +|+||+|+||+++|+|.+..
T Consensus       135 ----------~~~~~~~Y~asKaal~~l~~~la~e~~~~~~--~i~v~~i~Pg~~~T~~~~~~  185 (235)
T d1ooea_         135 ----------PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPD--NSAVLTIMPVTLDTPMNRKW  185 (235)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCT--TCEEEEEEESCBCCHHHHHH
T ss_pred             ----------CcccccchHHHHHHHHHHHHHHHHHhccCCC--ceEEEEEecCcCcCcchhhh
Confidence                      5566799999999999999999999984322  59999999999999986543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.2e-29  Score=204.76  Aligned_cols=175  Identities=14%  Similarity=0.136  Sum_probs=148.2

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||++  |||+++|+.|+++ +..|++++|+++..+...+....        +|+++..++...+.++.+.++++|++|
T Consensus        10 ITGass~~GIG~aiA~~l~~~-G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v   88 (258)
T d1qsga_          10 VTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFV   88 (258)
T ss_dssp             ECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEE
T ss_pred             EECCCCchhHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccceEE
Confidence            799998  8999999999999 55788888986544443332221        799999999999999999999999999


Q ss_pred             EccCCccccCCC-----CCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          71 NNAAIAFKVNSS-----EPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        71 ~~ag~~~~~~~~-----~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      ||++........     ....+.|...+.+|+.+.+.+++++.+.+++++.||++||..+..                  
T Consensus        89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~------------------  150 (258)
T d1qsga_          89 HSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------------  150 (258)
T ss_dssp             ECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------------
T ss_pred             EeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc------------------
Confidence            999986543332     345577899999999999999999999999889999999988733                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                            +.+.+..|++||+|+++|++++|.||+++    |||||+|+||+|+|++....
T Consensus       151 ----------------------~~~~~~~Y~~sKaal~~ltr~lA~el~~~----gIrVN~I~PG~i~T~~~~~~  199 (258)
T d1qsga_         151 ----------------------AIPNYNVMGLAKASLEANVRYMANAMGPE----GVRVNAISAGPIRTLAASGI  199 (258)
T ss_dssp             ----------------------BCTTTTHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCCCCTTGGGS
T ss_pred             ----------------------CCCCcHHHHHHHHHHHHHHHHHHHHhCcc----Cceeeccccccccccccccc
Confidence                                  45566899999999999999999999998    89999999999999997654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.95  E-value=6.9e-28  Score=197.16  Aligned_cols=173  Identities=21%  Similarity=0.171  Sum_probs=138.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-hHHHHHhhhc--------------ccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-GQEALEKLQK--------------LDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-~~~~~~~~~~--------------~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||++|||+++|+.|+++ |.+|++++|+.++ .+...+++..              .|.+.++.++++++++.+++|+
T Consensus         6 VTGas~GIG~aia~~la~~-G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   84 (266)
T d1mxha_           6 ITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGR   84 (266)
T ss_dssp             ETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999 5588888887654 4455555433              2445577888999999999999


Q ss_pred             CcEEEEccCCccccCCCC-----------CChhHHHHHHHHhhhhHHHHHHHhcccccC-------CceEEEecCCCccc
Q psy7994          66 VDVLVNNAAIAFKVNSSE-----------PFGSQALHTMRTNYFALIDVCDILFPLLRS-------HGRVVNVSSSCGHL  127 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~-----------~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-------~g~ii~~sS~~~~~  127 (230)
                      ||++|||||+..+..+.+           ...+.+...+..|+.+++...+...+.+..       .+.++++++..+. 
T Consensus        85 iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  163 (266)
T d1mxha_          85 CDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTD-  163 (266)
T ss_dssp             CCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGG-
T ss_pred             CCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcccc-
Confidence            999999999876544332           223556778899999999999888876632       3578888887763 


Q ss_pred             cccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEe
Q psy7994         128 CHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCV  207 (230)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v  207 (230)
                                                             .+.+++..|++||+|+++|++++|.++.++    |||||+|
T Consensus       164 ---------------------------------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~I  200 (266)
T d1mxha_         164 ---------------------------------------LPLPGFCVYTMAKHALGGLTRAAALELAPR----HIRVNAV  200 (266)
T ss_dssp             ---------------------------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEE
T ss_pred             ---------------------------------------ccCcchhhhhhhHHHHhhhHHHHHHHhCcc----CcEEEEe
Confidence                                                   245567999999999999999999999998    8999999


Q ss_pred             cCCccccCCCC
Q psy7994         208 HPGYVNTDMSS  218 (230)
Q Consensus       208 ~pG~v~t~~~~  218 (230)
                      +||+++|++..
T Consensus       201 ~PG~i~t~~~~  211 (266)
T d1mxha_         201 APGLSLLPPAM  211 (266)
T ss_dssp             EESSBSCCSSS
T ss_pred             ccCcEeccccC
Confidence            99999998754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.95  E-value=3.6e-28  Score=202.07  Aligned_cols=176  Identities=11%  Similarity=0.160  Sum_probs=142.1

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh------------------------------------
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------------------------------------   42 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~------------------------------------   42 (230)
                      ||||++  |||+++|++|+++ +..|++++|++...........                                    
T Consensus        13 VTGass~~GIG~aiA~~la~~-Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   91 (297)
T d1d7oa_          13 IAGIADDNGYGWAVAKSLAAA-GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVPED   91 (297)
T ss_dssp             EECCSSSSSHHHHHHHHHHHT-TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSCHH
T ss_pred             EECCCCCchHHHHHHHHHHHC-CCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccchhh
Confidence            799875  9999999999999 5677888876543222111000                                    


Q ss_pred             -----cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc--ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCc
Q psy7994          43 -----KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHG  115 (230)
Q Consensus        43 -----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g  115 (230)
                           .+|.++...++++++++.+.||+||+||||||...  ..++.+.+.++|++++++|+.+++.+++++++.+++++
T Consensus        92 v~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g  171 (297)
T d1d7oa_          92 VKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGG  171 (297)
T ss_dssp             HHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             hhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCC
Confidence                 02346677889999999999999999999999854  45678889999999999999999999999999999988


Q ss_pred             eEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh-
Q psy7994         116 RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS-  194 (230)
Q Consensus       116 ~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-  194 (230)
                      +++++++.....                                       ...+....|+++|+++..+++.++.++. 
T Consensus       172 ~~~~~~~~~~~~---------------------------------------~~~~~~~~y~~aKaa~~~l~~~~a~e~~~  212 (297)
T d1d7oa_         172 ASISLTYIASER---------------------------------------IIPGYGGGMSSAKAALESDTRVLAFEAGR  212 (297)
T ss_dssp             EEEEEECGGGTS---------------------------------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeeeehhhcc---------------------------------------cccccccceecccccccccccccchhccc
Confidence            888888766532                                       1233457899999999999999999996 


Q ss_pred             hhhccCCeEEEEecCCccccCCCCCC
Q psy7994         195 QDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       195 ~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                      +.    |||||+|+||+++|++.+..
T Consensus       213 ~~----gIrvN~I~PG~i~T~~~~~~  234 (297)
T d1d7oa_         213 KQ----NIRVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             HH----CCEEEEEEECCCBCCCSSCC
T ss_pred             cc----eEEecccccccccchhhhhc
Confidence            45    79999999999999998754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=1.1e-27  Score=193.35  Aligned_cols=170  Identities=19%  Similarity=0.201  Sum_probs=138.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc--
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK--   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~--   78 (230)
                      ||||++|||+++|++|+++ ++.|++++|+++..+.   ...++|+++...+..+..+....+. .+.++++++....  
T Consensus         6 ITGas~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   80 (241)
T d1uaya_           6 VTGGASGLGRAAALALKAR-GYRVVVLDLRREGEDL---IYVEGDVTREEDVRRAVARAQEEAP-LFAVVSAAGVGLAEK   80 (241)
T ss_dssp             EETTTSHHHHHHHHHHHHH-TCEEEEEESSCCSSSS---EEEECCTTCHHHHHHHHHHHHHHSC-EEEEEECCCCCCCCC
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECCcccccc---eEeeccccchhhhHHHHHhhhcccc-ccchhhhhhcccccc
Confidence            7999999999999999999 5688899998765431   1224899999999999988877654 4555666665422  


Q ss_pred             --cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc------c--CCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          79 --VNSSEPFGSQALHTMRTNYFALIDVCDILFPLL------R--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        79 --~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l------~--~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                        ......+.+.|++++++|+.+.+.+++.+.+.+      .  +.|+||++||..+..                     
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~---------------------  139 (241)
T d1uaya_          81 ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE---------------------  139 (241)
T ss_dssp             SBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH---------------------
T ss_pred             ccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc---------------------
Confidence              334456678899999999999999999988763      2  248999999998843                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                                         +.++...|+++|+|+.+|+++++.|++++    |||||+|+||+++|++...
T Consensus       140 -------------------~~~~~~~Y~asKaal~~lt~~lA~ela~~----gIrVN~V~PG~i~T~~~~~  187 (241)
T d1uaya_         140 -------------------GQIGQAAYAASKGGVVALTLPAARELAGW----GIRVVTVAPGLFDTPLLQG  187 (241)
T ss_dssp             -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSCSSHHHHT
T ss_pred             -------------------CCCCchhhHHHHHHHHHHHHHHHHHHhhc----CCceeeecCCcccccccch
Confidence                               45567999999999999999999999998    8999999999999997644

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.94  E-value=1.6e-27  Score=194.85  Aligned_cols=164  Identities=18%  Similarity=0.174  Sum_probs=136.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||++|||++++++|+++|..+|++++|+..   ..++..+++..         ||++|+++++++++++.+. +++|+
T Consensus        14 VTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-~~i~~   92 (259)
T d2fr1a1          14 VTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-VPLSA   92 (259)
T ss_dssp             EETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-SCEEE
T ss_pred             EECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-ccccc
Confidence            79999999999999999997778999998743   34444444432         8999999999999988664 68999


Q ss_pred             EEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHH
Q psy7994          69 LVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEE  148 (230)
Q Consensus        69 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (230)
                      ||||+|...+.++.+.+.+.|+.++++|+.+++++.+.+.+  .+.++||++||+++..                     
T Consensus        93 vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~iv~~SS~a~~~---------------------  149 (259)
T d2fr1a1          93 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASAF---------------------  149 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHHT---------------------
T ss_pred             cccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc--cCCceEeeecchhhcc---------------------
Confidence            99999999999999999999999999999999999997754  3558999999998844                     


Q ss_pred             HHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         149 LSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                         +.+++..|+++|++++.|++    +++..    |+++++|+||++.+.
T Consensus       150 -------------------g~~~~~~YaAaka~l~~la~----~~~~~----Gi~v~~I~pg~~~~~  189 (259)
T d2fr1a1         150 -------------------GAPGLGGYAPGNAYLDGLAQ----QRRSD----GLPATAVAWGTWAGS  189 (259)
T ss_dssp             -------------------CCTTCTTTHHHHHHHHHHHH----HHHHT----TCCCEEEEECCBC--
T ss_pred             -------------------CCcccHHHHHHHHhHHHHHH----HHHhC----CCCEEECCCCcccCC
Confidence                               56677999999999988765    44555    677999999987543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.94  E-value=1.2e-26  Score=190.82  Aligned_cols=174  Identities=22%  Similarity=0.273  Sum_probs=137.0

Q ss_pred             CCCCCC--cHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------ccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANK--GIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~--giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|  |||+++|+.|+++ +.+|++++|+++ +++..+++.+         +|+++++++.++++++.+.++++|++
T Consensus        10 ITGaag~~GIG~AiA~~la~~-Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~l   87 (274)
T d2pd4a1          10 IVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFI   87 (274)
T ss_dssp             EECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEE
T ss_pred             EECCCCCcHHHHHHHHHHHHC-CCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCCeE
Confidence            799764  9999999999999 668888999854 3333333322         89999999999999999999999999


Q ss_pred             EEccCCccccCC----CCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          70 VNNAAIAFKVNS----SEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        70 v~~ag~~~~~~~----~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |||+|.......    .....+.+...+.++..+.+...+.+.+.++..+.|+++++.+...                  
T Consensus        88 V~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~------------------  149 (274)
T d2pd4a1          88 VHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------------------  149 (274)
T ss_dssp             EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------------
T ss_pred             EeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc------------------
Confidence            999998644322    2233455566677777777777777777666666777777766532                  


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCCC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK  220 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~~  220 (230)
                                            +......|+++|+|+.+++++++.|++++    |||||+|+||+++|++....
T Consensus       150 ----------------------~~~~~~~y~asK~al~~ltr~lA~e~~~~----GIrvN~I~PG~v~T~~~~~~  198 (274)
T d2pd4a1         150 ----------------------YMAHYNVMGLAKAALESAVRYLAVDLGKH----HIRVNALSAGPIRTLASSGI  198 (274)
T ss_dssp             ----------------------BCTTCHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCTTGGGS
T ss_pred             ----------------------ccccchhhhHHHHHHHHHHHhhHHHhcCc----CceecccccCcccCcccccc
Confidence                                  34455899999999999999999999998    88899999999999987654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.94  E-value=3.4e-26  Score=187.36  Aligned_cols=171  Identities=14%  Similarity=0.177  Sum_probs=138.7

Q ss_pred             CCC--CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH-HHhhhc------ccCCCHHHHHHHHHHHHhhc---CCCcE
Q psy7994           1 VTG--ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA-LEKLQK------LDILDKNSIKALHDHLEAEH---GGVDV   68 (230)
Q Consensus         1 ItG--~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~-~~~~~~------~D~s~~~~v~~~~~~~~~~~---~~id~   68 (230)
                      |||  |++|||+++|++|+++ +.+|++++|+..++.+. .+.+..      +|++++++++.+++.+.+.+   ++||+
T Consensus        11 ItGaag~~GIG~aiA~~la~~-Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~   89 (268)
T d2h7ma1          11 VSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDG   89 (268)
T ss_dssp             ECCCSSTTCHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccCCCcce
Confidence            799  4579999999999999 56888999988776443 333322      89999999999999987765   57999


Q ss_pred             EEEccCCccc-----cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhc
Q psy7994          69 LVNNAAIAFK-----VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEI  143 (230)
Q Consensus        69 lv~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~  143 (230)
                      +|||+|+...     .++.+.+.+.|.+.+.+|+.+.+...+...+.+.+.+.|+++++...                  
T Consensus        90 ~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~------------------  151 (268)
T d2h7ma1          90 VVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS------------------  151 (268)
T ss_dssp             EEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS------------------
T ss_pred             eeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc------------------
Confidence            9999997632     23455777899999999999999999999887766665555444332                  


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCC
Q psy7994         144 KSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS  217 (230)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~  217 (230)
                                             .+.+....|+++|+|+.+|+++++.++++.    |||||+|+||+++|++.
T Consensus       152 -----------------------~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~----gIrVN~V~PG~v~T~~~  198 (268)
T d2h7ma1         152 -----------------------RAMPAYNWMTVAKSALESVNRFVAREAGKY----GVRSNLVAAGPIRTLAM  198 (268)
T ss_dssp             -----------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCHHH
T ss_pred             -----------------------ccCcccchhhccccchhhccccchhhhhcc----CCcceEEecCCCCChhh
Confidence                                   234456899999999999999999999998    78899999999999865

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.91  E-value=2e-24  Score=175.53  Aligned_cols=186  Identities=21%  Similarity=0.186  Sum_probs=123.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhc-CCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEH-GGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~-~~id~lv~~ag~~~~~   79 (230)
                      ||||++|||+++|++|+++ +.+|++++|+.++.        .+|+++.+..+....++.... +.+|++|||||+.   
T Consensus         6 ITGas~GIG~aiA~~la~~-Ga~V~~~~~~~~~~--------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~---   73 (257)
T d1fjha_           6 ISGCATGIGAATRKVLEAA-GHQIVGIDIRDAEV--------IADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG---   73 (257)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSSSSE--------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC---
T ss_pred             EeCCCCHHHHHHHHHHHHC-CCEEEEEECChHHH--------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCC---
Confidence            7999999999999999999 55788888875432        269999998887776665554 5799999999975   


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCC--ceEEEecCCCcc-ccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH--GRVVNVSSSCGH-LCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--g~ii~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                          ...+.++..+.+|..+...+.+..++.+...  ..+.++.+.... ......+...             .......
T Consensus        74 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~g~~  136 (257)
T d1fjha_          74 ----PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLAL-------------ALEAGEE  136 (257)
T ss_dssp             ----TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHH-------------HHHHTCH
T ss_pred             ----CcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhh-------------hccCCcE
Confidence                3346688899999999999999999877543  566666654432 1111110000             0000000


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCCCCC
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG  219 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~~~~  219 (230)
                      ....+-.......++...|++||+|+.+|+|++|.|++++    |||||+|+||+++|++.+.
T Consensus       137 ~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~----gIrVN~I~PG~i~T~~~~~  195 (257)
T d1fjha_         137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEA----GVRLNTIAPGATETPLLQA  195 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHT----TCEEEEEEECC--------
T ss_pred             EEEeeehhccCCCcchHHHHHHhhhhhccccccccccccc----cccccccccCCcCChhHHh
Confidence            0000000001112234679999999999999999999998    8889999999999998764

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=1.1e-15  Score=129.16  Aligned_cols=169  Identities=16%  Similarity=0.055  Sum_probs=117.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-----hhHHHHHh---------hhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-----RGQEALEK---------LQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-----~~~~~~~~---------~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|.||.+++++|.++ ++.|+.++|...     +++.....         +.++|++|.+++++++++.     .+
T Consensus         6 ITGatGfiGs~lv~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   79 (357)
T d1db3a_           6 ITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----QP   79 (357)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-----CC
T ss_pred             EeCCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-----CC
Confidence            7999999999999999999 567777777432     22222111         1238999999999999876     79


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccc-ccCCceEEEecCCCccccccchHHHHHHhhhhchh
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL-LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS  145 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~-l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~  145 (230)
                      |+++|+|+.....    .+.++.+..+++|+.|+..+++++... +++..++|++||...+..+...             
T Consensus        80 d~v~h~aa~~~~~----~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~-------------  142 (357)
T d1db3a_          80 DEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEI-------------  142 (357)
T ss_dssp             SEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSS-------------
T ss_pred             CEEEEeecccccc----hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCC-------------
Confidence            9999999986322    233556778999999999999988653 3344689999987654322111             


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         146 VEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                      .-++..+..|...|+.||.+.+.+++.+++.+.       +.+..+-|+.+-.|
T Consensus       143 ----------------~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~-------l~~~ilR~~~vyGp  189 (357)
T d1db3a_         143 ----------------PQKETTPFYPRSPYAVAKLYAYWITVNYRESYG-------MYACNGILFNHESP  189 (357)
T ss_dssp             ----------------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-------CCEEEEEECCEECT
T ss_pred             ----------------CcCCCCCCCCCChHHHHHHHHHHHHHHHHHHhC-------CCEEEEEeccccCC
Confidence                            012233445678999999999999988877653       33666666655444

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.60  E-value=3.3e-16  Score=121.52  Aligned_cols=97  Identities=15%  Similarity=0.074  Sum_probs=81.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||++|||+++++.|+++ +.+|++++|+.+++++..+.+..        +|+++.+++++++       +++|+||||
T Consensus        28 ItGasgGIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~iDilin~   99 (191)
T d1luaa1          28 VLAGTGPVGMRSAALLAGE-GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-------KGAHFVFTA   99 (191)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-------TTCSEEEEC
T ss_pred             EECCCHHHHHHHHHHHHhh-ccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-------cCcCeeeec
Confidence            7999999999999999999 56899999999999888776653        8999999988765       589999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcc
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP  109 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  109 (230)
                      +|..    +...+.+.|++.+++|+.+.+.....+.+
T Consensus       100 Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~  132 (191)
T d1luaa1         100 GAIG----LELLPQAAWQNESSIEIVADYNAQPPLGI  132 (191)
T ss_dssp             CCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSB
T ss_pred             Cccc----cccCCHHHHHhhhcceeehhHhhHHHHHH
Confidence            9974    34578899999999999888876655544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=2.2e-13  Score=113.82  Aligned_cols=168  Identities=14%  Similarity=0.054  Sum_probs=112.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc---hhHHHHHh-------hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS---RGQEALEK-------LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~---~~~~~~~~-------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|.||..++++|+++| ..|++++|...   ......+.       +.++|++|.+.++++++..     ++|+||
T Consensus         5 ItG~tGfIG~~l~~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~Vi   78 (338)
T d1udca_           5 VTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDTVI   78 (338)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSEEE
T ss_pred             EECCCCHHHHHHHHHHHHCc-CEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCEEE
Confidence            79999999999999999995 56666655221   11111111       2238999999999998864     799999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+|+....    ..+.+..+..+++|+.|+..+++++...  +-.++|++||...+.......                 
T Consensus        79 HlAa~~~~----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~--~v~~~i~~Ss~~vy~~~~~~~-----------------  135 (338)
T d1udca_          79 HFAGLKAV----GESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDQPKIP-----------------  135 (338)
T ss_dssp             ECCSCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCCSSS-----------------
T ss_pred             ECCCccch----hhHHhCHHHHHHhHHHHHHHHHHHHHHh--CCCEEEecCcceEEccccccc-----------------
Confidence            99996421    1233456789999999999999988642  235899998876643322110                 


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                                 ...+.....|...|+.+|.+.+.+.+....+..      ++.+..+.|+.+-.
T Consensus       136 -----------~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~------~~~~~ilR~~~v~G  182 (338)
T d1udca_         136 -----------YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP------DWSIALLRYFNPVG  182 (338)
T ss_dssp             -----------BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHST------TCEEEEEEECEEEC
T ss_pred             -----------cccccccCCCcchHHHHHhhhhHHHHHHHhhcc------CCeEEEEeeccEEe
Confidence                       001122345678999999999998876665532      23455555555443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=1.3e-13  Score=115.43  Aligned_cols=158  Identities=15%  Similarity=0.061  Sum_probs=107.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHH--Hh-------hhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEAL--EK-------LQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~--~~-------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      ||||+|.||++++++|+++| +.|+.+++ .....+...  ..       +..+|++|.++++.++...     ++|+||
T Consensus         6 VTGatGfIG~~lv~~Ll~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d~Vi   79 (347)
T d1z45a2           6 VTGGAGYIGSHTVVELIENG-YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KIDSVI   79 (347)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCCEEE
T ss_pred             EeCCCcHHHHHHHHHHHHCc-CeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCCEEE
Confidence            79999999999999999995 56666654 222222111  11       1238999999999988754     799999


Q ss_pred             EccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHH
Q psy7994          71 NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELS  150 (230)
Q Consensus        71 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (230)
                      |+|+.....    ...+.....+.+|+.|+..+++++..  .+-.++|++||...+......+                 
T Consensus        80 hlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~~~--~~i~~~i~~SS~~vyg~~~~~~-----------------  136 (347)
T d1z45a2          80 HFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSATVYGDATRFP-----------------  136 (347)
T ss_dssp             ECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGGGCCGGGST-----------------
T ss_pred             Ecccccccc----ccccCcccccccchhhhHHHHHHHHh--cccceEEeecceeeecCcccCC-----------------
Confidence            999975211    12234567889999999999998853  2225899999987755322110                 


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhh
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQ  195 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~  195 (230)
                              .....++..+..|...|+.+|.+.+.+++.+......
T Consensus       137 --------~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~  173 (347)
T d1z45a2         137 --------NMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK  173 (347)
T ss_dssp             --------TCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTT
T ss_pred             --------CCCccccccCCCCCChhHhHHHHHHHHHHHHHHhhcc
Confidence                    0011122334556689999999999998877664433

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.48  E-value=8e-14  Score=117.78  Aligned_cols=181  Identities=14%  Similarity=0.084  Sum_probs=118.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch--hHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR--GQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~--~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|.||.+++++|++.|..+|+.+++....  .+....       .+..+|++|.+.+..+++..     ++|+|||
T Consensus         5 ItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~Vih   79 (361)
T d1kewa_           5 ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDAVMH   79 (361)
T ss_dssp             EESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCEEEE
Confidence            799999999999999999977666666643211  111100       12238999999999998865     7999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC-------CceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-------HGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-------~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +|+....    ....+....++++|+.|+..+++++...-..       ..++|++||.+.+......+........+  
T Consensus        80 lAa~~~~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~--  153 (361)
T d1kewa_          80 LAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLP--  153 (361)
T ss_dssp             CCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCC--
T ss_pred             Cccccch----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCC--
Confidence            9997421    1223445678999999999999988764321       25899999987654322110000000000  


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                                       -..+..+..|...|+.||.+.+.+++.++....       +.+.++.|+.+-.|.
T Consensus       154 -----------------~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~-------i~~~~lR~~~vyGp~  201 (361)
T d1kewa_         154 -----------------LFTETTAYAPSSPYSASKASSDHLVRAWRRTYG-------LPTIVTNCSNNYGPY  201 (361)
T ss_dssp             -----------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-------CCEEEEEECEEESTT
T ss_pred             -----------------CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------CCEEEEecCceECcC
Confidence                             000122334568899999999999988876543       446667777665543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1e-13  Score=115.82  Aligned_cols=155  Identities=15%  Similarity=0.018  Sum_probs=109.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch-----hHH----HHH------hhhcccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-----GQE----ALE------KLQKLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~-----~~~----~~~------~~~~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||+|.||.+++++|.++ ++.|+.++|..+.     ++.    ...      ++..+|++|.+.+..++.+.     .
T Consensus         6 VTG~tGfIG~~l~~~Ll~~-g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   79 (347)
T d1t2aa_           6 ITGITGQDGSYLAEFLLEK-GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-----K   79 (347)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EecCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-----c
Confidence            7999999999999999999 5677777774321     111    111      12338999999999999876     7


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccc-cCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL-RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l-~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      +++++|+++....    ....+.....+++|+.|+..+++++...- .+..++|++||.+.+..+...            
T Consensus        80 ~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~------------  143 (347)
T d1t2aa_          80 PTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEI------------  143 (347)
T ss_dssp             CSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSS------------
T ss_pred             cceeeeeeecccc----chhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCC------------
Confidence            8899999987421    12334556678999999999999886543 344689999987654322111            


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhh
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLS  194 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~  194 (230)
                                       .-++..+..|...|+.||.+.+.+++.++..+.
T Consensus       144 -----------------~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~  176 (347)
T d1t2aa_         144 -----------------PQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN  176 (347)
T ss_dssp             -----------------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             -----------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                             012234455678999999999999988776543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=3e-13  Score=111.44  Aligned_cols=163  Identities=17%  Similarity=0.114  Sum_probs=110.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||.+|+++|+++|..++++..+.            ++|+++.+.+..+++.-     .+|.++|+|+..... 
T Consensus         7 ITG~tGfiG~~l~~~L~~~g~~vi~~~~~~------------~~~~~~~~~~~~~~~~~-----~~d~v~~~a~~~~~~-   68 (315)
T d1e6ua_           7 IAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------ELNLLDSRAVHDFFASE-----RIDQVYLAAAKVGGI-   68 (315)
T ss_dssp             EETTTSHHHHHHHHHHTTCTTEEEECCCTT------------TCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCCH-
T ss_pred             EEcCCcHHHHHHHHHHHHCcCEEEEecCch------------hccccCHHHHHHHHhhc-----CCCEEEEcchhcccc-
Confidence            799999999999999999955444333222            37999999999888753     799999999764210 


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                        ..........+++|+.|+..+++++...  .-.++|++||.+.+..+...+..                        .
T Consensus        69 --~~~~~~~~~~~~~Nv~gt~~ll~~a~~~--~v~~~i~~SS~~vyg~~~~~~~~------------------------E  120 (315)
T d1e6ua_          69 --VANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAKQPMA------------------------E  120 (315)
T ss_dssp             --HHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCCSSBC------------------------G
T ss_pred             --ccchhhHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECCceEcCCCCCCCcc------------------------C
Confidence              1122445567889999999999988431  22589999998876543221000                        0


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                      ....+..+.++..+|+.||.+.+.+++.+..+.+       +++..+-|+.+-.|.
T Consensus       121 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g-------l~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         121 SELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYG-------RDYRSVMPTNLYGPH  169 (315)
T ss_dssp             GGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHC-------CEEEEEEECEEESTT
T ss_pred             CccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------CCEEEEeeccEECCC
Confidence            0001112233456899999999999988766553       457778887775553

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.42  E-value=1.8e-13  Score=114.49  Aligned_cols=186  Identities=19%  Similarity=0.134  Sum_probs=117.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-----------hcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----------QKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-----------~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|.||.+++++|.++ +..|+.+.|+.++........           ...|++|.+++..++.       .+|++
T Consensus        16 VTG~sGfIGs~l~~~Ll~~-G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~~~v   87 (342)
T d1y1pa1          16 VTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAAGV   87 (342)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCSEE
T ss_pred             EECCCCHHHHHHHHHHHHC-cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------cchhh
Confidence            7999999999999999999 567888888876655443211           1169999988776653       68999


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHH
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEEL  149 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (230)
                      +|+++...       ........+..|+.|+..+++.+... ..-.++|++||..+.+.+.....   ........+...
T Consensus        88 ~~~a~~~~-------~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~~~~~~~~~~---~~~~~e~~~~~~  156 (342)
T d1y1pa1          88 AHIASVVS-------FSNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVE---GIYLDEKSWNLE  156 (342)
T ss_dssp             EECCCCCS-------CCSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCC---CCEECTTCCCHH
T ss_pred             hhhccccc-------ccccccccccchhhhHHHHHHhhhcc-cccccccccccceeeccCCCCCC---Cccccccccccc
Confidence            99999742       11224567788999999999988542 12368999999765332111000   000000000000


Q ss_pred             HHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         150 SALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                      ..      .......+..+..+..+|+.+|.+.+.++..+++....     ++++..+.|+.+-.+.
T Consensus       157 ~~------~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-----~~~~~~i~p~~v~Gp~  212 (342)
T d1y1pa1         157 SI------DKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-----HFTLNAVLPNYTIGTI  212 (342)
T ss_dssp             HH------HHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-----SSEEEEEEESEEECCC
T ss_pred             cc------cccccccccCCCCCcCcccchhHhHHHHHHHhhhhccc-----ccccceecccceeCCC
Confidence            00      00001111223334578999999999999888776544     3778888888775543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=6.7e-14  Score=115.89  Aligned_cols=170  Identities=12%  Similarity=0.071  Sum_probs=108.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHH--HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEAL--EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~--~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|.||++++++|.++ +..|+.+++ ...+.+...  .....+|+.+.+.++.+       +.++|+|||+|+...
T Consensus         6 VtG~sGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-------~~~~d~VihlAa~~~   77 (312)
T d2b69a1           6 ITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-------YIEVDQIYHLASPAS   77 (312)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-------CCCCSEEEECCSCCS
T ss_pred             EECCCcHHHHHHHHHHHHC-cCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHH-------HcCCCEEEECcccCC
Confidence            7999999999999999999 456666655 222222211  11222566655544332       347999999999753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      ..    ...+...+.+++|+.|+..+++++..   .+.++|++||.+.+..+...+.                       
T Consensus        78 ~~----~~~~~~~~~~~~Nv~g~~~ll~~~~~---~~~k~I~~SS~~vy~~~~~~~~-----------------------  127 (312)
T d2b69a1          78 PP----NYMYNPIKTLKTNTIGTLNMLGLAKR---VGARLLLASTSEVYGDPEVHPQ-----------------------  127 (312)
T ss_dssp             HH----HHTTCHHHHHHHHHHHHHHHHHHHHH---HTCEEEEEEEGGGGBSCSSSSB-----------------------
T ss_pred             ch----hHHhCHHHHHHHHHHHHHHHHHHHHH---cCCcEEEEEChheecCCCCCCC-----------------------
Confidence            21    11234567899999999999998753   2358999999766554321100                       


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccCC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM  216 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~~  216 (230)
                       ......+..+..|...|+.+|.+.+.+++.++...+       +.+..+.|+.+-.|.
T Consensus       128 -~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-------~~~~~lR~~~vyGp~  178 (312)
T d2b69a1         128 -SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG-------VEVRVARIFNTFGPR  178 (312)
T ss_dssp             -CTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHC-------CCEEEEEECCEECTT
T ss_pred             -CccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHhC-------CcEEEEEeeeEECCC
Confidence             000001122345678999999999999988877643       446677777665543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.36  E-value=4e-12  Score=105.97  Aligned_cols=165  Identities=17%  Similarity=0.049  Sum_probs=111.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc----hhHHHHHh----------hhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS----RGQEALEK----------LQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~----~~~~~~~~----------~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|.||.+++++|.++ ++.|+.+++...    ..+.....          +..+|..|.........       ..
T Consensus        21 VTG~tGfIGs~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~   92 (341)
T d1sb8a_          21 ITGVAGFIGSNLLETLLKL-DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-------GV   92 (341)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-------TC
T ss_pred             EecCCCHHHHHHHHHHHHC-cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc-------cc
Confidence            7999999999999999999 556666665222    11211111          11278888887665543       68


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      +.++|.+.....    ....+.....+++|+.|+..+++++...  +..++|++||...+......+             
T Consensus        93 ~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~~~i~~SS~~vyg~~~~~~-------------  153 (341)
T d1sb8a_          93 DYVLHQAALGSV----PRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGLP-------------  153 (341)
T ss_dssp             SEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSS-------------
T ss_pred             cccccccccccc----cccccCccchhheeehhHHHHHHHHHhc--CCceEEEcccceeeCCCCCCC-------------
Confidence            888888876421    1234567789999999999999988532  235899999987754322111             


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                      .++..+..|...|+.+|.+.+.+++.+++...       +++..+-|+.+-.+
T Consensus       154 ----------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-------i~~~ilR~~~v~G~  199 (341)
T d1sb8a_         154 ----------------KVEDTIGKPLSPYAVTKYVNELYADVFSRCYG-------FSTIGLRYFNVFGR  199 (341)
T ss_dssp             ----------------BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHC-------CCCEEEEECCEECT
T ss_pred             ----------------ccCCCCCCCCCcchHHHHHHHHHHHHHHHHhC-------CCeEEEEeceeecc
Confidence                            13344566779999999999999988876543       33556666655443

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.35  E-value=1.1e-11  Score=105.20  Aligned_cols=183  Identities=13%  Similarity=0.028  Sum_probs=108.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec----------------CcchhHHHHH----------hhhcccCCCHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR----------------DASRGQEALE----------KLQKLDILDKNSIKA   54 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r----------------~~~~~~~~~~----------~~~~~D~s~~~~v~~   54 (230)
                      ||||+|.||.+++++|+++| +.|+.++-                ..........          ++..+|++|.+.++.
T Consensus         6 VTGatGfiG~~lv~~Ll~~g-~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~   84 (393)
T d1i24a_           6 VIGGDGYCGWATALHLSKKN-YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAE   84 (393)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHH
T ss_pred             EECCCcHHHHHHHHHHHHCc-CEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHH
Confidence            79999999999999999995 55655530                0011111111          112389999999999


Q ss_pred             HHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHH
Q psy7994          55 LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        55 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      +++..     ++|+|+|.|+..... ....+.+.....+.+|+.|+..+++++... ....++++.||...+.....+..
T Consensus        85 ~~~~~-----~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~~i~~ss~~~~~~~~~~~~  157 (393)
T d1i24a_          85 SFKSF-----EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLVKLGTMGEYGTPNIDIE  157 (393)
T ss_dssp             HHHHH-----CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGGCCCSSCBC
T ss_pred             HHHhh-----cchheeccccccccc-cccccccccccccccccccccHHHHHHHHh-ccccceeeccccccccccccccc
Confidence            99876     799999999874211 112344667788999999999999987521 12245666666544321110000


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                         .......             ......+...+..|...|+.+|.+.+.+++.++.+..       +.+..+.|+.+-.
T Consensus       158 ---~~~~~~~-------------~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~-------l~~~~lR~~~v~G  214 (393)
T d1i24a_         158 ---EGYITIT-------------HNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-------IRATDLNQGVVYG  214 (393)
T ss_dssp             ---SSEEEEE-------------ETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC-------CEEEEEEECEEEC
T ss_pred             ---ccccccc-------------ccccccccccccccccHHHHHhhhhcccccccccccc-------eeeeecccccccC
Confidence               0000000             0000000011334557899999999999987766554       3355565554443

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.34  E-value=7.6e-12  Score=105.89  Aligned_cols=177  Identities=14%  Similarity=0.123  Sum_probs=113.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec---------CcchhHHHHHhh-----------------hcccCCCHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR---------DASRGQEALEKL-----------------QKLDILDKNSIKA   54 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r---------~~~~~~~~~~~~-----------------~~~D~s~~~~v~~   54 (230)
                      ||||+|.||.+++++|++++++.|+.+++         .....+.....+                 ..+|++|.+.+++
T Consensus         7 ITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~   86 (383)
T d1gy8a_           7 VCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNG   86 (383)
T ss_dssp             EETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHH
T ss_pred             EeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhh
Confidence            79999999999999999876778877653         111222222211                 1279999999888


Q ss_pred             HHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHH
Q psy7994          55 LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEA  134 (230)
Q Consensus        55 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~  134 (230)
                      +++..    .++|+|+|+|+.....    ...+.....+++|+.++..+++++..  ....+++++++...+........
T Consensus        87 ~~~~~----~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~~~--~~~~~~~~~~s~~~~~~~~~~~~  156 (383)
T d1gy8a_          87 VFTRH----GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSAAIFGNPTMGSV  156 (383)
T ss_dssp             HHHHS----CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGGTBSCCC---
T ss_pred             hhhcc----ceeehhhccccccccc----ccccccccccccccccccccchhhhc--cCCcccccccccccccccccccc
Confidence            88753    5789999999975321    22344567889999999999998853  22246777766555332221110


Q ss_pred             HHHHhhhhchhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         135 LKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                      ..                      -.....+.....|...|+.+|.+.+.+++.+...+.       +.+.++.|+.+-.
T Consensus       157 ~~----------------------~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g-------l~~~~lR~~~vyG  207 (383)
T d1gy8a_         157 ST----------------------NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG-------IKGICLRYFNACG  207 (383)
T ss_dssp             ------------------------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC-------CEEEEEEECEEEC
T ss_pred             cc----------------------cccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhC-------CCEEEEecceeec
Confidence            00                      000011122345678999999999999977766543       4466677666544


Q ss_pred             CC
Q psy7994         215 DM  216 (230)
Q Consensus       215 ~~  216 (230)
                      +.
T Consensus       208 ~~  209 (383)
T d1gy8a_         208 AH  209 (383)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=1.7e-12  Score=108.15  Aligned_cols=172  Identities=14%  Similarity=0.052  Sum_probs=110.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH----hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE----KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~----~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||+|.||++++++|+++|...|+.+++..........    ++..+|+++.+++.+.+.+      ++|+|||+|+..
T Consensus         5 ITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~------~~d~Vih~a~~~   78 (342)
T d2blla1           5 ILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK------KCDVVLPLVAIA   78 (342)
T ss_dssp             EETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH------HCSEEEECBCCC
T ss_pred             EECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh------CCCccccccccc
Confidence            799999999999999999976678887775543332221    1234899988776554331      599999999985


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHH
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF  156 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (230)
                      ...    ...+.....+++|+.|+..+++++.   +.+.++++.||...+..+......                     
T Consensus        79 ~~~----~~~~~~~~~~~~nv~gt~~ll~~~~---~~~~~~~~~ss~~~~~~~~~~~~~---------------------  130 (342)
T d2blla1          79 TPI----EYTRNPLRVFELDFEENLRIIRYCV---KYRKRIIFPSTSEVYGMCSDKYFD---------------------  130 (342)
T ss_dssp             CHH----HHHHSHHHHHHHHTHHHHHHHHHHH---HTTCEEEEECCGGGGBTCCCSSBC---------------------
T ss_pred             ccc----ccccCCccccccccccccccccccc---cccccccccccccccccccccccc---------------------
Confidence            321    2223446789999999999999884   234466777776654432211000                     


Q ss_pred             HHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCcccc
Q psy7994         157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t  214 (230)
                       .......+.....|...|+.||.+.+.+++.+++.....       +..+.|..+-.
T Consensus       131 -~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~-------~~i~r~~~~~g  180 (342)
T d2blla1         131 -EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQ-------FTLFRPFNWMG  180 (342)
T ss_dssp             -TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCC-------EEEEEECSEEC
T ss_pred             -cccccccccccCCCcchhhhcccchhhhhhhhhcccCce-------eEEeecccccc
Confidence             000000011223456889999999999998877665432       55555554443

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.33  E-value=2e-12  Score=107.32  Aligned_cols=168  Identities=17%  Similarity=0.012  Sum_probs=113.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-----hhHHH---HH-------hhhcccCCCHHHHHHHHHHHHhhcCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-----RGQEA---LE-------KLQKLDILDKNSIKALHDHLEAEHGG   65 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-----~~~~~---~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~   65 (230)
                      ||||||.||+++++.|.++ ++.|+.++|..+     ++...   ..       .+..+|+++.+.+.+.++..     +
T Consensus         6 VTGatGfiG~~lv~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~-----~   79 (339)
T d1n7ha_           6 ITGITGQDGSYLTEFLLGK-GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-----K   79 (339)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EeCCccHHHHHHHHHHHHC-cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh-----c
Confidence            7999999999999999999 567777777432     11111   11       12238999999999998865     8


Q ss_pred             CcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccC---CceEEEecCCCccccccchHHHHHHhhhh
Q psy7994          66 VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS---HGRVVNVSSSCGHLCHVTSEALKKKLLHE  142 (230)
Q Consensus        66 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~---~g~ii~~sS~~~~~~~~~~~~~~~~~~~~  142 (230)
                      +|+|||+|+.....    ...+.....+..|+.+...+.+++.....+   ..++++.||..... +..           
T Consensus        80 ~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~-~~~-----------  143 (339)
T d1n7ha_          80 PDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFG-STP-----------  143 (339)
T ss_dssp             CSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGT-TSC-----------
T ss_pred             cchhhhcccccccc----ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecc-cCC-----------
Confidence            99999999974211    123456678999999999999888643321   23555555544322 110           


Q ss_pred             chhHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         143 IKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                        ...++..+..|...|+.+|.+.+.++..+....       ++.+..+-|+.+-.|
T Consensus       144 ------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilR~~~vyGp  191 (339)
T d1n7ha_         144 ------------------PPQSETTPFHPRSPYAASKCAAHWYTVNYREAY-------GLFACNGILFNHESP  191 (339)
T ss_dssp             ------------------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEECT
T ss_pred             ------------------CCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh-------CCCEEEEEEccccCC
Confidence                              112334556678999999999999987776654       344666776655444

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.32  E-value=1e-11  Score=102.26  Aligned_cols=155  Identities=16%  Similarity=0.080  Sum_probs=104.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcch--hHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR--GQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~--~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|.||++++++|.++ ++.|+.++|....  .+....       .+..+|++|.+.+...+...     ..+++++
T Consensus         5 ItG~tGfiG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~~~~   78 (321)
T d1rpna_           5 VTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQEVYN   78 (321)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EECCCCHHHHHHHHHHHHC-cCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----ccccccc
Confidence            7999999999999999999 5677777775432  121111       12348999999999988876     6788888


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      +++.....    ...+.....++.|+.|+..+++++... ....++++.||..- +.....                   
T Consensus        79 ~a~~~~~~----~~~~~~~~~~~~n~~g~~~~l~~~~~~-~~~~~~i~~Ss~~~-~~~~~~-------------------  133 (321)
T d1rpna_          79 LAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEM-FGLIQA-------------------  133 (321)
T ss_dssp             CCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGG-GCSCSS-------------------
T ss_pred             cccccccc----ccccchHHHHhhhhhchHHHHHHHHHh-CCCcccccccchhh-cCcccC-------------------
Confidence            88764211    122445778999999999999988431 11235666665443 321111                   


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhh
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQ  195 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~  195 (230)
                               ...++..+..+...|+.+|.+.+.+++.++.....
T Consensus       134 ---------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~  168 (321)
T d1rpna_         134 ---------ERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGL  168 (321)
T ss_dssp             ---------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ---------CCCCCCCCccccChhHHHHHHHHHHHHHHHhhcCC
Confidence                     01123345567799999999999998887766543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.31  E-value=1.3e-11  Score=101.89  Aligned_cols=171  Identities=11%  Similarity=-0.011  Sum_probs=104.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec-CcchhHHHHHh--------hhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR-DASRGQEALEK--------LQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r-~~~~~~~~~~~--------~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||+|.||.+++++|.++| ..|+.+++ ...........        +..+|+++.+.+..+++..     ++|+|||
T Consensus         5 VTGatGfIGs~lv~~Ll~~g-~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~Vih   78 (338)
T d1orra_           5 ITGGCGFLGSNLASFALSQG-IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSCFH   78 (338)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EECCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceEEe
Confidence            79999999999999999995 56665553 22222111111        1238999999999998865     7999999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchH-HHHHHhhhhchhHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSE-ALKKKLLHEIKSVEELS  150 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  150 (230)
                      +|+....    ....+.....+++|+.|+..+++++..  ....+.|++||........... ........+..      
T Consensus        79 ~aa~~~~----~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~------  146 (338)
T d1orra_          79 LAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV------  146 (338)
T ss_dssp             CCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET------
T ss_pred             ecccccc----cccccChHHHHHHHHHHHHHHHHhhhc--cccccccccccccccccccccccccccccccccc------
Confidence            9997521    122345678999999999999997753  2334555555554433221100 00000000000      


Q ss_pred             HHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         151 ALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                             .............+...|+.+|...+.+.......+...
T Consensus       147 -------~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~  185 (338)
T d1orra_         147 -------DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLN  185 (338)
T ss_dssp             -------TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             -------ccccCcccCCccccccccccccchhhhhhhhhhhccCcc
Confidence                   000001112233456899999999999888877776554

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.28  E-value=3.2e-11  Score=100.52  Aligned_cols=175  Identities=15%  Similarity=0.015  Sum_probs=117.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh--------hcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL--------QKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~--------~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|.||.++++.|.++ +..|+.++|.........+..        ..+|++|++.+.++++..     .+|+++|+
T Consensus        13 VTG~tGfIGs~lv~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~~~v~~~   86 (356)
T d1rkxa_          13 VTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QPEIVFHM   86 (356)
T ss_dssp             EETTTSHHHHHHHHHHHHT-TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hhhhhhhh
Confidence            7999999999999999999 557888888766443332221        128999999999988865     89999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHH
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL  152 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (230)
                      ++....    ....+.....+++|+.|+..+++++... .....+++.|+......+...                    
T Consensus        87 aa~~~~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~-~~~~~~~~~s~~~~~~~~~~~--------------------  141 (356)
T d1rkxa_          87 AAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHV-GGVKAVVNITSDKCYDNKEWI--------------------  141 (356)
T ss_dssp             CSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCCEEEEECCGGGBCCCCSS--------------------
T ss_pred             hccccc----cccccCCccccccccccchhhhhhhhcc-ccccccccccccccccccccc--------------------
Confidence            997521    1224556788999999999999988531 122344544444333222111                    


Q ss_pred             HHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh--hccCCeEEEEecCCcccc
Q psy7994         153 MNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD--AIREDLVVNCVHPGYVNT  214 (230)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~--~~~~~i~v~~v~pG~v~t  214 (230)
                              ....+..+..|...|+.+|...+.+++.++.++...  ..+.++.+..+.|+.+-.
T Consensus       142 --------~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyG  197 (356)
T d1rkxa_         142 --------WGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIG  197 (356)
T ss_dssp             --------SCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEEC
T ss_pred             --------cccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeC
Confidence                    001112234566899999999999998888765331  112257777777776543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.27  E-value=3.1e-12  Score=107.45  Aligned_cols=173  Identities=16%  Similarity=0.093  Sum_probs=111.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHH--HhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEAL--EKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~--~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|.||.+++++|.++| +.|+.+++... ......  ..+..+|+.+.+.+..+++       .+|.|||+|+...
T Consensus        20 VTGgsGfIGs~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~Vih~a~~~~   91 (363)
T d2c5aa1          20 ITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE-------GVDHVFNLAADMG   91 (363)
T ss_dssp             EETTTSHHHHHHHHHHHHTT-CEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred             EECCCCHHHHHHHHHHHHCc-CEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhh-------cCCeEeecccccc
Confidence            79999999999999999994 56666655332 221111  1233378888877766553       6899999998753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                      ..   ....+.....+..|+.++..+++++..  ..-.++|++||...+......+..                      
T Consensus        92 ~~---~~~~~~~~~~~~~n~~gt~~ll~~~~~--~~vk~~i~~SS~~~~~~~~~~~~~----------------------  144 (363)
T d2c5aa1          92 GM---GFIQSNHSVIMYNNTMISFNMIEAARI--NGIKRFFYASSACIYPEFKQLETT----------------------  144 (363)
T ss_dssp             CH---HHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEEEEGGGSCGGGSSSSS----------------------
T ss_pred             cc---cccccccccccccccchhhHHHHhHHh--hCcccccccccccccccccccccc----------------------
Confidence            21   122345677899999999999998843  122589999997775432211000                      


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                      .......+..+..|...|+.+|.+.+.+++.+...+.       +.+..+.|+.+-.+
T Consensus       145 ~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~g-------l~~~ilR~~~vyG~  195 (363)
T d2c5aa1         145 NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFG-------IECRIGRFHNIYGP  195 (363)
T ss_dssp             SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHC-------CEEEEEEECCEECT
T ss_pred             ccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhC-------CCEEEEEeeeEecc
Confidence            0000001122345568999999999999887765543       44666776666544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.23  E-value=1.3e-11  Score=102.03  Aligned_cols=166  Identities=22%  Similarity=0.099  Sum_probs=109.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-----eEEEEecC--cc---hhHHHHH----hhhcccCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-----IIYLTARD--AS---RGQEALE----KLQKLDILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-----~vi~~~r~--~~---~~~~~~~----~~~~~D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      ||||+|.||.++++.|+++|..     .++..+..  ..   .+.....    .+...|.++........       ...
T Consensus         5 ItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~   77 (322)
T d1r6da_           5 VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------RGV   77 (322)
T ss_dssp             EETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------TTC
T ss_pred             EECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc-------ccc
Confidence            7999999999999999999643     23333321  11   1111100    12237888887766543       378


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhH
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV  146 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
                      |+++|+|+....    ..........+++|+.|++.+++++...  +..++|++||...+..+...              
T Consensus        78 d~vi~~a~~~~~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~--~~~~~I~~Ss~~~yg~~~~~--------------  137 (322)
T d1r6da_          78 DAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA--GVGRVVHVSTNQVYGSIDSG--------------  137 (322)
T ss_dssp             CEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGCCCSSS--------------
T ss_pred             ceEEeecccccc----cccccchHHHhhhhHHHHHHHHHHHHHc--CCceEEEeecceeecCCCCC--------------
Confidence            999999987532    1233456678899999999999988531  23589999987765432211              


Q ss_pred             HHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                                     .-++..+..|...|+.+|.+.+.+++.++++..       +.+..+-|+.+=.+
T Consensus       138 ---------------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-------~~~~~lR~~~vyGp  184 (322)
T d1r6da_         138 ---------------SWTESSPLEPNSPYAASKAGSDLVARAYHRTYG-------LDVRITRCCNNYGP  184 (322)
T ss_dssp             ---------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-------CCEEEEEECEEECT
T ss_pred             ---------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------CCEEEEEeeeEECc
Confidence                           012344566778999999999999988876543       34666666666443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.21  E-value=2e-11  Score=98.87  Aligned_cols=136  Identities=18%  Similarity=0.111  Sum_probs=96.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||+|.||.++++.|.++ +..|.+..+...         ..+|++|.+.++++++..     ++|+|||+||..... 
T Consensus         5 ItG~tGfiG~~l~~~L~~~-g~~v~~~~~~~~---------~~~Dl~~~~~~~~~i~~~-----~~D~Vih~Aa~~~~~-   68 (298)
T d1n2sa_           5 LFGKTGQVGWELQRSLAPV-GNLIALDVHSKE---------FCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVD-   68 (298)
T ss_dssp             EECTTSHHHHHHHHHTTTT-SEEEEECTTCSS---------SCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH-
T ss_pred             EECCCCHHHHHHHHHHHhC-CCEEEEECCCcc---------ccCcCCCHHHHHHHHHHc-----CCCEEEEeccccccc-
Confidence            7999999999999999998 445544433322         237999999999999876     799999999975321 


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                         ...+.....+.+|+.++..+.+++.   +...+++++||...+......                            
T Consensus        69 ---~~~~~~~~~~~~n~~~~~~l~~~~~---~~~~~~~~~ss~~~~~~~~~~----------------------------  114 (298)
T d1n2sa_          69 ---KAESEPELAQLLNATSVEAIAKAAN---ETGAWVVHYSTDYVFPGTGDI----------------------------  114 (298)
T ss_dssp             ---HHTTCHHHHHHHHTHHHHHHHHHHT---TTTCEEEEEEEGGGSCCCTTC----------------------------
T ss_pred             ---ccccCccccccccccccccchhhhh---ccccccccccccccccCCCCC----------------------------
Confidence               2234456788999999999999884   234577887776654432211                            


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHH
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSF  187 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~  187 (230)
                       --++..+..|...|+.+|...+.+.+
T Consensus       115 -~~~E~~~~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_         115 -PWQETDATSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             -CBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             -CCccccccCCCchHhhhhhhhhhhHH
Confidence             01223455567899999988776653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.2e-10  Score=96.95  Aligned_cols=151  Identities=17%  Similarity=0.131  Sum_probs=100.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec------CcchhHHH---HHh-------hhcccCCCHHHHHHHHHHHHhhcC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR------DASRGQEA---LEK-------LQKLDILDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r------~~~~~~~~---~~~-------~~~~D~s~~~~v~~~~~~~~~~~~   64 (230)
                      ||||+|.||.+++++|+++|. .|+.+++      ........   ...       +.++|++|.+.++.++...     
T Consensus         7 ITG~tGfIGs~lv~~Ll~~g~-~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----   80 (346)
T d1ek6a_           7 VTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-----   80 (346)
T ss_dssp             EETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-----
T ss_pred             EECCCcHHHHHHHHHHHHCcC-EEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc-----
Confidence            799999999999999999965 5544432      11111111   111       2238999999999988753     


Q ss_pred             CCcEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhch
Q psy7994          65 GVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK  144 (230)
Q Consensus        65 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~  144 (230)
                      .+++++|+|+....    ....+.....+++|+.|+..+.+++..  .+-.+++++||...+.......           
T Consensus        81 ~~~~i~h~Aa~~~~----~~~~~~p~~~~~~Nv~gt~~l~~~~~~--~~v~~~i~~ss~~~~~~~~~~~-----------  143 (346)
T d1ek6a_          81 SFMAVIHFAGLKAV----GESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSATVYGNPQYLP-----------  143 (346)
T ss_dssp             CEEEEEECCSCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGGGCSCSSSS-----------
T ss_pred             ccccccccccccCc----HhhHhCHHHHHHhhhcccccccchhhh--cCcccccccccceeeecccccc-----------
Confidence            78899999997531    122344567899999999999998742  1224788888876654432110           


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHH
Q psy7994         145 SVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHA  191 (230)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~  191 (230)
                                       .........+..+|+.+|...+...+.++.
T Consensus       144 -----------------~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~  173 (346)
T d1ek6a_         144 -----------------LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ  173 (346)
T ss_dssp             -----------------BCTTSCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------ccccccccccCChHHHHHHHHHHHHHHHHH
Confidence                             001111233457899999999988876654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.20  E-value=1e-11  Score=103.66  Aligned_cols=177  Identities=16%  Similarity=0.056  Sum_probs=108.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEec-CcchhHHHHH-------hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTAR-DASRGQEALE-------KLQKLDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r-~~~~~~~~~~-------~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      ||||||.||.+++++|.++|.. .|+..+. +.........       ++..+|++|.+.+..++.       ..|.++|
T Consensus         7 VTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~~~v~~   79 (346)
T d1oc2a_           7 VTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KADAIVH   79 (346)
T ss_dssp             EETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hhhhhhh
Confidence            7999999999999999999654 2333322 1111111111       122389999999988864       6888999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHH
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSA  151 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (230)
                      .|+.....    ....+....+++|+.|+..+++++..   .+.++|++||...+..............           
T Consensus        80 ~a~~~~~~----~~~~~~~~~~~~N~~g~~nll~~~~~---~~~k~i~~ss~~vyg~~~~~~~~~~~~~-----------  141 (346)
T d1oc2a_          80 YAAESHND----NSLNDPSPFIHTNFIGTYTLLEAARK---YDIRFHHVSTDEVYGDLPLREDLPGHGE-----------  141 (346)
T ss_dssp             CCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHH---HTCEEEEEEEGGGGCCBCCGGGSTTTTC-----------
T ss_pred             hhhccccc----chhhCcccceeeehHhHHhhhhhhcc---ccccccccccceEecccCcccccccccc-----------
Confidence            99875321    11234567889999999999987743   2347788877655432111100000000           


Q ss_pred             HHHHHHHHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhhhccCCeEEEEecCCccccC
Q psy7994         152 LMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD  215 (230)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~~~~~i~v~~v~pG~v~t~  215 (230)
                            ......++..+..|...|+.+|.+.+.+++.+..++       |+++..+-|+.+-.|
T Consensus       142 ------~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~-------~i~~~ilR~~~vyGp  192 (346)
T d1oc2a_         142 ------GPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF-------GVKATISNCSNNYGP  192 (346)
T ss_dssp             ------STTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEEST
T ss_pred             ------CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc-------CCCEEEEeecceeCC
Confidence                  000111223344566889999999999988776554       355777777766544

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5.9e-11  Score=91.98  Aligned_cols=106  Identities=14%  Similarity=0.107  Sum_probs=74.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|+||.+++++|+++ ++.|.+..|+++++.....   ++..+|++|.+++.++++       ..|+||+++|...
T Consensus         8 V~GatG~iG~~v~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~-------~~d~vi~~~g~~~   79 (205)
T d1hdoa_           8 IFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRN   79 (205)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTT
T ss_pred             EECCCCHHHHHHHHHHHHC-cCEEEEEEcChhhcccccccccccccccccchhhHHHHhc-------CCCEEEEEeccCC
Confidence            7999999999999999999 5688889998877543321   233489999999888765       6899999999753


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHL  127 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~  127 (230)
                      +...           .+++..+...+++++..  ..-.++|++||.....
T Consensus        80 ~~~~-----------~~~~~~~~~~l~~aa~~--~~v~r~i~~ss~~~~~  116 (205)
T d1hdoa_          80 DLSP-----------TTVMSEGARNIVAAMKA--HGVDKVVACTSAFLLW  116 (205)
T ss_dssp             CCSC-----------CCHHHHHHHHHHHHHHH--HTCCEEEEECCGGGTS
T ss_pred             chhh-----------hhhhHHHHHHHHHHHHh--cCCCeEEEEeeeeccC
Confidence            2111           12344455556665521  1225899999876543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.9e-10  Score=90.79  Aligned_cols=109  Identities=15%  Similarity=0.090  Sum_probs=76.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHH-Hhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEAL-EKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~-~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      ||||||.||.+++++|.++|. ..|++.+|++....... ..+..  +|+.+.+++.       +.+...|++||++|..
T Consensus        19 ItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~-------~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          19 ILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYA-------SAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             EECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGG-------GGGSSCSEEEECCCCC
T ss_pred             EECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccc-------cccccccccccccccc
Confidence            799999999999999999965 37888888765433221 22221  4555544433       2334799999999874


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                             ..........++|+.++..+++.+..  ..-.++|++|+...
T Consensus        92 -------~~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~fi~~Ss~~~  131 (232)
T d2bkaa1          92 -------RGKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSKGA  131 (232)
T ss_dssp             -------HHHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC
T ss_pred             -------ccccchhhhhhhcccccceeeecccc--cCccccccCCcccc
Confidence                   22344566788999999999998743  12258999998776

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.97  E-value=1.1e-09  Score=87.82  Aligned_cols=133  Identities=20%  Similarity=0.183  Sum_probs=92.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      ||||||.||.+++++|.++ +..|+.++|..            +|++|.++++++++..     ++|+|||+++....  
T Consensus         6 ItGasGfiG~~l~~~L~~~-g~~Vi~~~r~~------------~D~~d~~~~~~~l~~~-----~~d~vih~a~~~~~--   65 (281)
T d1vl0a_           6 ITGANGQLGREIQKQLKGK-NVEVIPTDVQD------------LDITNVLAVNKFFNEK-----KPNVVINCAAHTAV--   65 (281)
T ss_dssp             EESTTSHHHHHHHHHHTTS-SEEEEEECTTT------------CCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH--
T ss_pred             EECCCCHHHHHHHHHHHhC-CCEEEEeechh------------ccCCCHHHHHHHHHHc-----CCCEEEeecccccc--
Confidence            7999999999999999998 56788777753            6999999999998865     78999999987521  


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHHHHh
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELA  160 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (230)
                        +......+..+..|+.....+.+....   ....+++.||...+..+...+                           
T Consensus        66 --~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~~~~~~~ss~~v~~~~~~~~---------------------------  113 (281)
T d1vl0a_          66 --DKCEEQYDLAYKINAIGPKNLAAAAYS---VGAEIVQISTDYVFDGEAKEP---------------------------  113 (281)
T ss_dssp             --HHHHHCHHHHHHHHTHHHHHHHHHHHH---HTCEEEEEEEGGGSCSCCSSC---------------------------
T ss_pred             --ccccccchhhccccccccccccccccc---ccccccccccceeeecccccc---------------------------
Confidence              122233456778888888777776642   334566666655443322110                           


Q ss_pred             hcCCCcCCCCCCchhhHHHHHHHHHHH
Q psy7994         161 QDGSHTKGGWPNSAYAATKLGVTKLSF  187 (230)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~  187 (230)
                        .++..+..+...|+.+|...+.+.+
T Consensus       114 --~~e~~~~~~~~~~~~~k~~~e~~~~  138 (281)
T d1vl0a_         114 --ITEFDEVNPQSAYGKTKLEGENFVK  138 (281)
T ss_dssp             --BCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             --ccccccccchhhhhhhhhHHHHHHH
Confidence              1223345567889999988776653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.94  E-value=3.7e-09  Score=82.12  Aligned_cols=116  Identities=22%  Similarity=0.158  Sum_probs=80.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhh--hcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKL--QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~--~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      ||||+|.||+++++.|+++|.. .|+...|++++.......+  ..+|+++.+.+.++++       .+|.+||+++...
T Consensus         8 VtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~a~~~~   80 (252)
T d2q46a1           8 VTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQ-------GIDALVILTSAVP   80 (252)
T ss_dssp             EESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred             EECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccc-------cceeeEEEEeecc
Confidence            7999999999999999999664 4666778877665443322  2389999999887765       6899999998753


Q ss_pred             ccC---------CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVN---------SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~---------~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      ...         ........+.....+|+.++..+......  ...+...+.++...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~  135 (252)
T d2q46a1          81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--AGVKHIVVVGSMGG  135 (252)
T ss_dssp             EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--HTCSEEEEEEETTT
T ss_pred             ccccccchhhhhhcccccccchhhhccccccceeecccccc--cccccccccccccc
Confidence            211         11112234566778899998888776643  22356666666544

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.90  E-value=3.5e-09  Score=85.47  Aligned_cols=155  Identities=17%  Similarity=0.064  Sum_probs=93.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecC-cchhHHHHHhhhcccCCCHHHHHHHHHHHHh--hcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARD-ASRGQEALEKLQKLDILDKNSIKALHDHLEA--EHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~-~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~--~~~~id~lv~~ag~~~   77 (230)
                      ||||+|.||.++++.|+++|...|+.+++- ........   .+.++.+....+........  .+..++.++|.|+...
T Consensus         4 ITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~~   80 (307)
T d1eq2a_           4 VTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL---VDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSS   80 (307)
T ss_dssp             EETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH---HTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCC
T ss_pred             EecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc---cccchhhhccchHHHHHHhhhhcccchhhhhhhccccc
Confidence            799999999999999999976667666532 22111111   22344333333333333332  3457888999988642


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCccccccchHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV  157 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (230)
                            ......+...+.|+.++..+.++...   ..-++++.||......+....                        
T Consensus        81 ------~~~~~~~~~~~~~~~~~~~~l~~~~~---~~i~~v~~ss~~~~~~~~~~~------------------------  127 (307)
T d1eq2a_          81 ------TTEWDGKYMMDNNYQYSKELLHYCLE---REIPFLYASSAATYGGRTSDF------------------------  127 (307)
T ss_dssp             ------TTCCCHHHHHHHTHHHHHHHHHHHHH---HTCCEEEEEEGGGGTTCCSCB------------------------
T ss_pred             ------cccccccccccccccccccccccccc---ccccccccccccccccccccc------------------------
Confidence                  22233455778888888888887643   233466666665544332110                        


Q ss_pred             HHhhcCCCcCCCCCCchhhHHHHHHHHHHHHHHHhhhhh
Q psy7994         158 ELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQD  196 (230)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  196 (230)
                           ..+.....+...|+.+|.+.+.+++.++......
T Consensus       128 -----~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~  161 (307)
T d1eq2a_         128 -----IESREYEKPLNVYGYSKFLFDEYVRQILPEANSQ  161 (307)
T ss_dssp             -----CSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSC
T ss_pred             -----cccccccccccccccccchhhhhccccccccccc
Confidence                 0011123456899999999999998877665543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.72  E-value=1.1e-08  Score=78.98  Aligned_cols=107  Identities=12%  Similarity=0.062  Sum_probs=71.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      ||||||.||++++++|.++|.. .|+...|.+....   ..+ ..+..|..++..      ...+.+|.+|+++|.... 
T Consensus         7 ItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---~~~-~~~~~d~~~~~~------~~~~~~d~vi~~~g~~~~-   75 (212)
T d2a35a1           7 LAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---PRL-DNPVGPLAELLP------QLDGSIDTAFCCLGTTIK-   75 (212)
T ss_dssp             EECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---TTE-ECCBSCHHHHGG------GCCSCCSEEEECCCCCHH-
T ss_pred             EECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---ccc-cccccchhhhhh------ccccchheeeeeeeeecc-
Confidence            7999999999999999999664 5666666543211   111 234555443321      224579999999987521 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                           ....-+...++|+.++..+++++..  ..-.+++++||..+
T Consensus        76 -----~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~~i~~Ss~~~  114 (212)
T d2a35a1          76 -----EAGSEEAFRAVDFDLPLAVGKRALE--MGARHYLVVSALGA  114 (212)
T ss_dssp             -----HHSSHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC
T ss_pred             -----ccccccccccchhhhhhhccccccc--cccccccccccccc
Confidence                 1122356788999999999997742  22368999998776

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.51  E-value=1.5e-11  Score=93.77  Aligned_cols=42  Identities=14%  Similarity=0.293  Sum_probs=36.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK   43 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~   43 (230)
                      |+||+|+||.++|+.|+++ ++.|++.+|+++++++..+++..
T Consensus         5 vigGaG~iG~alA~~la~~-G~~V~l~~R~~e~~~~l~~~i~~   46 (212)
T d1jaya_           5 LLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAKAAEYRR   46 (212)
T ss_dssp             EETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh
Confidence            5788999999999999999 67888889999999888777653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.35  E-value=1.5e-06  Score=69.59  Aligned_cols=100  Identities=16%  Similarity=0.103  Sum_probs=63.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhH----HHHHh-------hhcccCCCHHHHHHHHHHHHhhcCCCcEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQ----EALEK-------LQKLDILDKNSIKALHDHLEAEHGGVDVL   69 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~----~~~~~-------~~~~D~s~~~~v~~~~~~~~~~~~~id~l   69 (230)
                      ||||+|.||++++++|.++| +.|+...|+.....    .....       +..+|++|.+.+...+.       ..+.+
T Consensus         8 VtGatG~iG~~l~~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~~~~   79 (312)
T d1qyda_           8 IVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QVDVV   79 (312)
T ss_dssp             EESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TCSEE
T ss_pred             EECCCCHHHHHHHHHHHhCC-CEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Ccchh
Confidence            79999999999999999995 66777777654221    11111       11379999998887765       67889


Q ss_pred             EEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          70 VNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        70 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                      +++++....               ..|..+...++.++..  ....++++.||.+.
T Consensus        80 ~~~~~~~~~---------------~~~~~~~~~~l~~a~~--~~~~~~v~~Ss~g~  118 (312)
T d1qyda_          80 ISALAGGVL---------------SHHILEQLKLVEAIKE--AGNIKRFLPSEFGM  118 (312)
T ss_dssp             EECCCCSSS---------------STTTTTHHHHHHHHHH--SCCCSEEECSCCSS
T ss_pred             hhhhhhccc---------------ccchhhhhHHHHHHHH--hcCCcEEEEeeccc
Confidence            988876321               1233444444444422  22356677776544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.03  E-value=3.8e-05  Score=60.63  Aligned_cols=68  Identities=22%  Similarity=0.266  Sum_probs=49.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHH-----HHHhh-------hcccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQE-----ALEKL-------QKLDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~-----~~~~~-------~~~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      ||||+|.||+++++.|.++| +.|+..+|+......     ....+       ..+|+.+.....+.++       ..+.
T Consensus         8 VtGatG~iG~~l~~~L~~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~~~   79 (307)
T d1qyca_           8 LIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------NVDV   79 (307)
T ss_dssp             EESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------TCSE
T ss_pred             EECCCcHHHHHHHHHHHHCC-CeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------hcee
Confidence            79999999999999999994 577777776543211     11111       1269999988777765       6889


Q ss_pred             EEEccCCc
Q psy7994          69 LVNNAAIA   76 (230)
Q Consensus        69 lv~~ag~~   76 (230)
                      ++++++..
T Consensus        80 vi~~~~~~   87 (307)
T d1qyca_          80 VISTVGSL   87 (307)
T ss_dssp             EEECCCGG
T ss_pred             eeeccccc
Confidence            99988763

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=97.96  E-value=5.8e-05  Score=61.69  Aligned_cols=66  Identities=14%  Similarity=0.134  Sum_probs=46.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH-H-----hhhcccCCCHHH-HHHHHHHHHhhcCCCcEEEEcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL-E-----KLQKLDILDKNS-IKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~-~-----~~~~~D~s~~~~-v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      ||||||.||.++++.|.++ ++.|+...|++++..... .     ++..+|++|+.+ ++.++       ...|.++.+.
T Consensus         8 VtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~-------~~~~~~~~~~   79 (350)
T d1xgka_           8 VVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLF-------EGAHLAFINT   79 (350)
T ss_dssp             EESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHH-------TTCSEEEECC
T ss_pred             EECCChHHHHHHHHHHHhC-CCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHh-------cCCceEEeec
Confidence            7999999999999999999 567777788776554321 1     122379998655 33332       3678877665


Q ss_pred             C
Q psy7994          74 A   74 (230)
Q Consensus        74 g   74 (230)
                      .
T Consensus        80 ~   80 (350)
T d1xgka_          80 T   80 (350)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.69  E-value=2.4e-05  Score=58.40  Aligned_cols=99  Identities=18%  Similarity=0.086  Sum_probs=62.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+||+||+|.......... +..|+.+.+++++.+...+.-.+  .|.++.  ..+.+..+  .-+++|++|.+.|... 
T Consensus        37 I~gaaGGVG~~aiQlak~~-Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~--~~~~~~~~--~~~gvD~vid~vgg~~-  110 (176)
T d1xa0a2          37 VTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEVLAREDV--MAERIRPL--DKQRWAAAVDPVGGRT-  110 (176)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEEEECC-----------C--CSCCEEEEEECSTTTT-
T ss_pred             EEeccchHHHHHHHHHHHc-CCceEEecCchHHHHHHHhcccceeeecchh--HHHHHHHh--hccCcCEEEEcCCchh-
Confidence            6899999999877754455 77888888888887655432111  343321  12222221  1238999999999631 


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcccccc
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHV  130 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~  130 (230)
                                               ++..+..|+++|+++.++...+...+.
T Consensus       111 -------------------------~~~~l~~l~~~Griv~~G~~~g~~~~~  137 (176)
T d1xa0a2         111 -------------------------LATVLSRMRYGGAVAVSGLTGGAEVPT  137 (176)
T ss_dssp             -------------------------HHHHHHTEEEEEEEEECSCCSSSCCCC
T ss_pred             -------------------------HHHHHHHhCCCceEEEeecccCcccCC
Confidence                                     223455678899999999887755444

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.66  E-value=4.9e-05  Score=56.67  Aligned_cols=96  Identities=10%  Similarity=0.073  Sum_probs=67.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+||+||+|.+.+...... +.+|+.+.+++++.+...+.-..  +|..+++..+...+....  ..+|+++++.|..  
T Consensus        35 V~ga~ggvG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~--~Gvd~v~D~vG~~--  109 (182)
T d1v3va2          35 VSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASP--DGYDCYFDNVGGE--  109 (182)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCT--TCEEEEEESSCHH--
T ss_pred             EEeCCCchhHHHHHHHHcc-CCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhc--CCCceeEEecCch--
Confidence            6899999999888755555 67888888888776554433211  566666666666554432  3799999999841  


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                              ..+..++.++++|+++.++...+
T Consensus       110 ------------------------~~~~~~~~l~~~G~~v~~G~~~~  132 (182)
T d1v3va2         110 ------------------------FLNTVLSQMKDFGKIAICGAISV  132 (182)
T ss_dssp             ------------------------HHHHHGGGEEEEEEEEECCCGGG
T ss_pred             ------------------------hhhhhhhhccCCCeEEeecceee
Confidence                                    23455677889999999875544

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.56  E-value=8.5e-05  Score=54.56  Aligned_cols=97  Identities=16%  Similarity=0.107  Sum_probs=66.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh--cccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~--~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |.|++|++|...+..+...|...|+..++++++++...+.-.  -.|.++++..++..+...  -+.+|++|.++|... 
T Consensus        33 V~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~--~~~~d~vid~~g~~~-  109 (170)
T d1jvba2          33 VVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE--SKGVDAVIDLNNSEK-  109 (170)
T ss_dssp             EETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTT--TSCEEEEEESCCCHH-
T ss_pred             EEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhh--cccchhhhcccccch-
Confidence            578899999999998888877899999999887766543211  146566555555544331  136999999998631 


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                              .++..+..++++|+|+.++-..
T Consensus       110 ------------------------~~~~a~~~l~~~G~iv~~G~~~  131 (170)
T d1jvba2         110 ------------------------TLSVYPKALAKQGKYVMVGLFG  131 (170)
T ss_dssp             ------------------------HHTTGGGGEEEEEEEEECCSSC
T ss_pred             ------------------------HHHhhhhhcccCCEEEEecccc
Confidence                                    1123355678889999887443

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=5.8e-05  Score=56.58  Aligned_cols=96  Identities=13%  Similarity=0.037  Sum_probs=62.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+||+|...++.....|..+|+.++..+++......++..   +|.++++. .+.++++..  ..+|+++.+.|.. 
T Consensus        36 I~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~-~~~~~~~~~--~GvDvv~D~vGg~-  111 (187)
T d1vj1a2          36 VSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNV-AEQLREACP--GGVDVYFDNVGGD-  111 (187)
T ss_dssp             ESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCH-HHHHHHHCT--TCEEEEEESSCHH-
T ss_pred             EECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhH-HHHHHHHhc--cCceEEEecCCch-
Confidence            6899999999888866556666777777777776666655543   56665443 444444432  3699999999841 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                               ..+..++.++++|+++.+++..+
T Consensus       112 -------------------------~~~~~~~~l~~~G~iv~~G~~s~  134 (187)
T d1vj1a2         112 -------------------------ISNTVISQMNENSHIILCGQISQ  134 (187)
T ss_dssp             -------------------------HHHHHHTTEEEEEEEEEC-----
T ss_pred             -------------------------hHHHHhhhccccccEEEeccccc
Confidence                                     12344567789999999887665

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=0.0001  Score=54.34  Aligned_cols=93  Identities=23%  Similarity=0.233  Sum_probs=61.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|++|...+...... +..|+.+.+++++.+... ++-.   +|.++++-.+++.+....  ..+|+++.+.|.. 
T Consensus        34 V~Ga~G~vG~~aiq~a~~~-G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~~~~~~i~~~t~~--~g~d~v~d~~g~~-  108 (174)
T d1yb5a2          34 VHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVL-QNGAHEVFNHREVNYIDKIKKYVGE--KGIDIIIEMLANV-  108 (174)
T ss_dssp             EETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH-HTTCSEEEETTSTTHHHHHHHHHCT--TCEEEEEESCHHH-
T ss_pred             EEecccccccccccccccc-Cccccccccccccccccc-ccCcccccccccccHHHHhhhhhcc--CCceEEeecccHH-
Confidence            6799999999888866666 557887777776665443 3322   577776655554443322  2699999988731 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                               ..+..++.++++|+++.++..
T Consensus       109 -------------------------~~~~~~~~l~~~G~iv~~G~~  129 (174)
T d1yb5a2         109 -------------------------NLSKDLSLLSHGGRVIVVGSR  129 (174)
T ss_dssp             -------------------------HHHHHHHHEEEEEEEEECCCC
T ss_pred             -------------------------HHHHHHhccCCCCEEEEEecC
Confidence                                     123334566889999998754

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=0.00016  Score=53.08  Aligned_cols=97  Identities=20%  Similarity=0.145  Sum_probs=64.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcC-CCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHG-GVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~-~id~lv~~ag~~~   77 (230)
                      |.| +|++|...+..+...|+.+|+++++++.+++...+ +..  +...+.++.....+.+...++ .+|++|.++|.. 
T Consensus        32 I~G-~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~-~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~-  108 (171)
T d1pl8a2          32 VCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAE-  108 (171)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCH-
T ss_pred             EEC-CCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH-hCCcccccccccccccccccccccCCCCceEEEeccCCc-
Confidence            345 59999999988888877789999999998886543 321  222223333444444444444 799999999963 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                              ...+..+.+++++|++++++-..
T Consensus       109 ------------------------~~~~~a~~~~~~gG~iv~~G~~~  131 (171)
T d1pl8a2         109 ------------------------ASIQAGIYATRSGGTLVLVGLGS  131 (171)
T ss_dssp             ------------------------HHHHHHHHHSCTTCEEEECSCCC
T ss_pred             ------------------------hhHHHHHHHhcCCCEEEEEecCC
Confidence                                    12334455668899999987543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.50  E-value=0.00011  Score=54.49  Aligned_cols=95  Identities=20%  Similarity=0.180  Sum_probs=60.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|++|...+...... +..++.+.+++++.+... ++..   +|.++++-.+.+.+.. . ..++|+++.+.|.. 
T Consensus        31 I~ga~g~vG~~~iqla~~~-g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~~~~~~v~~~t-~-~~g~d~v~d~~g~~-  105 (183)
T d1pqwa_          31 IHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLS-RLGVEYVGDSRSVDFADEILELT-D-GYGVDVVLNSLAGE-  105 (183)
T ss_dssp             ETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHH-TTCCSEEEETTCSTHHHHHHHHT-T-TCCEEEEEECCCTH-
T ss_pred             EECCCCCcccccchhhccc-cccceeeecccccccccc-cccccccccCCccCHHHHHHHHh-C-CCCEEEEEecccch-
Confidence            6899999999988866666 667787878777665443 3321   4656554444433222 1 12699999999841 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                .               .+.++..+++.|++|.++...+
T Consensus       106 ----------~---------------~~~~~~~l~~~G~~v~~G~~~~  128 (183)
T d1pqwa_         106 ----------A---------------IQRGVQILAPGGRFIELGKKDV  128 (183)
T ss_dssp             ----------H---------------HHHHHHTEEEEEEEEECSCGGG
T ss_pred             ----------H---------------HHHHHHHhcCCCEEEEEccCCC
Confidence                      1               1222345688899999875444

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.46  E-value=0.00013  Score=54.67  Aligned_cols=98  Identities=10%  Similarity=0.026  Sum_probs=62.9

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCC--CHHHHHHHHHHHHhh-cCCCcEEEEc
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDIL--DKNSIKALHDHLEAE-HGGVDVLVNN   72 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s--~~~~v~~~~~~~~~~-~~~id~lv~~   72 (230)
                      +||+||+|.+........ +.+|+.+.+..+..++..+.+++      +|..  +..+....+.++.+. .+++|+++++
T Consensus        36 ~ga~g~vG~~aiqlAk~~-Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~  114 (189)
T d1gu7a2          36 NGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNC  114 (189)
T ss_dssp             SCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEES
T ss_pred             eCCCchHHHHHHHHHhhc-CCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCceEEEEC
Confidence            689999999887755555 66888888877777766555543      2211  112333444444433 3479999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                      .|..           .               ++..+..|+++|++|.+++..+.
T Consensus       115 vg~~-----------~---------------~~~~~~~l~~~G~~v~~G~~~~~  142 (189)
T d1gu7a2         115 VGGK-----------S---------------STGIARKLNNNGLMLTYGGMSFQ  142 (189)
T ss_dssp             SCHH-----------H---------------HHHHHHTSCTTCEEEECCCCSSC
T ss_pred             CCcc-----------h---------------hhhhhhhhcCCcEEEEECCccCC
Confidence            8742           1               12234567889999999876653

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.44  E-value=0.00032  Score=51.28  Aligned_cols=97  Identities=19%  Similarity=0.141  Sum_probs=63.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--c-cCCCHHHHHHHHHHHHhhcC-CCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--L-DILDKNSIKALHDHLEAEHG-GVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~-D~s~~~~v~~~~~~~~~~~~-~id~lv~~ag~~   76 (230)
                      |+| +|++|...+..+... +.+|+.+++++++++...+.-..  . .-...++.....+++.+..+ .+|++|.++|..
T Consensus        32 V~G-~G~vG~~~~~~ak~~-Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~  109 (170)
T d1e3ja2          32 VIG-AGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNE  109 (170)
T ss_dssp             EEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCH
T ss_pred             EEc-ccccchhhHhhHhhh-cccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeecCCCh
Confidence            455 689999988766666 56899999999988766543221  1 11222334455555555554 799999999863


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                .               ..+..+..++++|+|+.++-..
T Consensus       110 ----------~---------------~~~~a~~~~~~~G~iv~~G~~~  132 (170)
T d1e3ja2         110 ----------K---------------CITIGINITRTGGTLMLVGMGS  132 (170)
T ss_dssp             ----------H---------------HHHHHHHHSCTTCEEEECSCCS
T ss_pred             ----------H---------------HHHHHHHHHhcCCceEEEecCC
Confidence                      1               1233345568899999998543

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.00018  Score=53.13  Aligned_cols=99  Identities=16%  Similarity=0.192  Sum_probs=65.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+||+|++|..++...... +..|+.+.+++++.+...+.-..  +|.++++-.+++.+ +.+ -..+|+++.+.|..  
T Consensus        34 v~ga~g~vG~~~iqlak~~-Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~v~~-~t~-g~g~d~v~d~~g~~--  108 (179)
T d1qora2          34 FHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKE-ITG-GKKVRVVYDSVGRD--  108 (179)
T ss_dssp             ESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHH-HTT-TCCEEEEEECSCGG--
T ss_pred             EEccccccchHHHHHHHHh-CCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHHHHH-HhC-CCCeEEEEeCccHH--
Confidence            6899999999888865555 67899999998887665432111  67777655554433 322 13689999998852  


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcccc
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLC  128 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~  128 (230)
                               .+               +.....++++|+++.++.......
T Consensus       109 ---------~~---------------~~~~~~l~~~G~~v~~g~~~~~~~  134 (179)
T d1qora2         109 ---------TW---------------ERSLDCLQRRGLMVSFGNSSGAVT  134 (179)
T ss_dssp             ---------GH---------------HHHHHTEEEEEEEEECCCTTCCCC
T ss_pred             ---------HH---------------HHHHHHHhcCCeeeecccccCCcc
Confidence                     11               223446688899998887666443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.001  Score=49.21  Aligned_cols=66  Identities=18%  Similarity=0.151  Sum_probs=50.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH---hhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---KLQK--------LDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~---~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |+||.|++++..|.++|...+++.+|+.+..+....   .+..        .|+.+.+.+.....       ..|++||+
T Consensus        25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~diiIN~   97 (182)
T d1vi2a1          25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-------SADILTNG   97 (182)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-------TCSEEEEC
T ss_pred             CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-------ccceeccc
Confidence            568999999999999988899999999887765433   3322        56777776655543       78999999


Q ss_pred             cCCc
Q psy7994          73 AAIA   76 (230)
Q Consensus        73 ag~~   76 (230)
                      ....
T Consensus        98 Tp~G  101 (182)
T d1vi2a1          98 TKVG  101 (182)
T ss_dssp             SSTT
T ss_pred             cCCc
Confidence            8764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.17  E-value=0.00038  Score=51.21  Aligned_cols=93  Identities=17%  Similarity=0.150  Sum_probs=62.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.|+ |++|...+..+...|..+|+.+++++.+++.+.+ +-.   +|..+++ +.+.+.++..  +++|++|.+.|.. 
T Consensus        34 I~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~Ga~~~i~~~~~~-~~~~i~~~t~--gg~D~vid~~G~~-  107 (174)
T d1f8fa2          34 TWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGATHVINSKTQD-PVAAIKEITD--GGVNFALESTGSP-  107 (174)
T ss_dssp             EESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HTCSEEEETTTSC-HHHHHHHHTT--SCEEEEEECSCCH-
T ss_pred             EeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH-cCCeEEEeCCCcC-HHHHHHHHcC--CCCcEEEEcCCcH-
Confidence            4565 8999999988888878888888888887776544 221   5665544 3333444432  4799999999963 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                               +               ..+..+.+++++|+++.++..
T Consensus       108 ---------~---------------~~~~~~~~~~~~G~i~~~G~~  129 (174)
T d1f8fa2         108 ---------E---------------ILKQGVDALGILGKIAVVGAP  129 (174)
T ss_dssp             ---------H---------------HHHHHHHTEEEEEEEEECCCC
T ss_pred             ---------H---------------HHHHHHhcccCceEEEEEeec
Confidence                     1               122334466889999998753

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.08  E-value=0.00031  Score=51.83  Aligned_cols=94  Identities=15%  Similarity=0.081  Sum_probs=60.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.| +|++|...+..+...|...|+.+++++.+++...+ +-.   +|..+++-.+. +.++.+. ..+|++|.++|...
T Consensus        33 I~G-aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-lGa~~~i~~~~~~~~~~-v~~~t~g-~G~D~vid~~g~~~  108 (174)
T d1jqba2          33 VIG-IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-YGATDILNYKNGHIEDQ-VMKLTNG-KGVDRVIMAGGGSE  108 (174)
T ss_dssp             EEC-CSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-HTCSEEECGGGSCHHHH-HHHHTTT-SCEEEEEECSSCTT
T ss_pred             EEc-CCcchhhhhhhhhcccccccccccchhhhHHHHHh-hCccccccccchhHHHH-HHHHhhc-cCcceEEEccCCHH
Confidence            455 48999998887777766789999999887765543 321   45554333333 3332221 25999999999631


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                               ..+..+..++++|+++.++-.
T Consensus       109 -------------------------~~~~a~~~~~~~G~iv~~G~~  129 (174)
T d1jqba2         109 -------------------------TLSQAVKMVKPGGIISNINYH  129 (174)
T ss_dssp             -------------------------HHHHHHHHEEEEEEEEECCCC
T ss_pred             -------------------------HHHHHHHHHhcCCEEEEEeec
Confidence                                     122333455888999998743

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.08  E-value=0.00078  Score=48.95  Aligned_cols=66  Identities=20%  Similarity=0.231  Sum_probs=52.9

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           2 TGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         2 tG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      .|+ |++|..+++.|..+|...+.++.|+.++.+....++. +...+.+++...+.       ..|+||++.+..
T Consensus        30 iGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-~~~~~~~~~~~~l~-------~~Divi~atss~   95 (159)
T d1gpja2          30 VGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-GEAVRFDELVDHLA-------RSDVVVSATAAP   95 (159)
T ss_dssp             ESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-CEECCGGGHHHHHH-------TCSEEEECCSSS
T ss_pred             ECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-cccccchhHHHHhc-------cCCEEEEecCCC
Confidence            455 9999999999999977899999999999888887765 34445566655554       799999998864

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.01  E-value=0.00085  Score=49.53  Aligned_cols=94  Identities=15%  Similarity=0.037  Sum_probs=60.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcC--CCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHG--GVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~--~id~lv~~ag~   75 (230)
                      |+|+ |++|...+..+...|...|+.+++++++++-.. ++-.   +|.++.+ .....+++.+..+  .+|++|.++|.
T Consensus        34 V~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~-~~~~~~~i~~~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          34 IQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRETS-VEERRKAIMDITHGRGADFILEATGD  110 (182)
T ss_dssp             EECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTTSC-HHHHHHHHHHHTTTSCEEEEEECSSC
T ss_pred             EECC-Cccchhheecccccccccccccccccccccccc-cccceEEEeccccc-hHHHHHHHHHhhCCCCceEEeecCCc
Confidence            4665 899998888777776668999999998886553 3321   3444322 2233333333322  59999999986


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      ..                         ..+..+..++++|+++.++-
T Consensus       111 ~~-------------------------~~~~a~~~l~~~G~iv~~G~  132 (182)
T d1vj0a2         111 SR-------------------------ALLEGSELLRRGGFYSVAGV  132 (182)
T ss_dssp             TT-------------------------HHHHHHHHEEEEEEEEECCC
T ss_pred             hh-------------------------HHHHHHHHhcCCCEEEEEee
Confidence            31                         12334456688899998874

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.98  E-value=0.0015  Score=47.77  Aligned_cols=89  Identities=19%  Similarity=0.227  Sum_probs=54.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+|++|...+...... +..|+.+.+++++.+...+ +..   +|..+.  .    .++.+ ..++|+++.+.|-. 
T Consensus        33 I~ga~G~vG~~aiqlak~~-G~~vi~~~~~~~~~~~~~~-lGa~~~i~~~~~--~----~~~~~-~~g~D~v~d~~G~~-  102 (171)
T d1iz0a2          33 VQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA-LGAEEAATYAEV--P----ERAKA-WGGLDLVLEVRGKE-  102 (171)
T ss_dssp             ESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH-TTCSEEEEGGGH--H----HHHHH-TTSEEEEEECSCTT-
T ss_pred             EEeccccchhhhhhhhccc-ccccccccccccccccccc-cccceeeehhhh--h----hhhhc-cccccccccccchh-
Confidence            6899999999887755555 5678888888877765543 221   333321  1    22222 34799999987731 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                                 +               +..+..++++|+++.++...+
T Consensus       103 -----------~---------------~~~~~~l~~~G~~v~~G~~~g  124 (171)
T d1iz0a2         103 -----------V---------------EESLGLLAHGGRLVYIGAAEG  124 (171)
T ss_dssp             -----------H---------------HHHHTTEEEEEEEEEC-----
T ss_pred             -----------H---------------HHHHHHHhcCCcEEEEeCCCC
Confidence                       1               223456788999999876544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.96  E-value=0.0025  Score=45.33  Aligned_cols=107  Identities=19%  Similarity=0.144  Sum_probs=67.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhccc-------CCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLD-------ILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D-------~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.||+|.+|.+++..|+.++. ..+++.+.++.+.+.  ..+..++       .....+..+.+       ..-|++|..
T Consensus         5 IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~~~~~~~~~~~~~~~~~~-------~~aDivVit   75 (144)
T d1mlda1           5 VLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIETRATVKGYLGPEQLPDCL-------KGCDVVVIP   75 (144)
T ss_dssp             EETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSSSCEEEEEESGGGHHHHH-------TTCSEEEEC
T ss_pred             EECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhhhcCCCeEEcCCChHHHh-------CCCCEEEEC
Confidence            579999999999999998875 579999887654433  3443321       12233333332       379999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      +|.... +  ..   .-.+.++.|..-.-.+++.+.++ .+++.|+.+|..
T Consensus        76 ag~~~~-~--g~---sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvtNP  119 (144)
T d1mlda1          76 AGVPRK-P--GM---TRDDLFNTNATIVATLTAACAQH-CPDAMICIISNP  119 (144)
T ss_dssp             CSCCCC-T--TC---CGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECSSC
T ss_pred             CCcCCC-C--CC---CcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCc
Confidence            997431 1  11   22335666766666666666543 345777777643

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.94  E-value=0.00092  Score=48.91  Aligned_cols=91  Identities=18%  Similarity=0.128  Sum_probs=61.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNS   81 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~   81 (230)
                      |+|++|...+..+...|+.+|+.+++++++++...+.-..  +|.+ .+.++...+....  ..+|++|.++|...    
T Consensus        40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~-~~~~~~~~~~~~~--~g~d~vid~~g~~~----  112 (172)
T d1h2ba2          40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR-RDPVKQVMELTRG--RGVNVAMDFVGSQA----  112 (172)
T ss_dssp             CCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT-SCHHHHHHHHTTT--CCEEEEEESSCCHH----
T ss_pred             CCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc-ccHHHHHHHhhCC--CCceEEEEecCcch----
Confidence            4699999998888888888999999998877765543221  4433 3444444433211  26999999999631    


Q ss_pred             CCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          82 SEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        82 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                                           .++..+..++++|+++.++-
T Consensus       113 ---------------------~~~~a~~~l~~~G~iv~~G~  132 (172)
T d1h2ba2         113 ---------------------TVDYTPYLLGRMGRLIIVGY  132 (172)
T ss_dssp             ---------------------HHHHGGGGEEEEEEEEECCC
T ss_pred             ---------------------HHHHHHHHHhCCCEEEEEeC
Confidence                                 12444567788999998873

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.81  E-value=0.00017  Score=53.12  Aligned_cols=98  Identities=13%  Similarity=0.045  Sum_probs=63.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCC-CHHHHHHHHHHHHhhc--CCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDIL-DKNSIKALHDHLEAEH--GGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s-~~~~v~~~~~~~~~~~--~~id~lv~~ag~~~   77 (230)
                      |+||+||+|...+. |++.-+..|+.+.+++++.+...+.-  +|.. +.+   ....+.....  +++|++|.+.|.. 
T Consensus        29 V~gaaGgVG~~avQ-lAk~~Ga~Viat~~s~~k~~~~~~lG--ad~vi~~~---~~~~~~~~~~~~~gvd~vid~vgg~-  101 (167)
T d1tt7a2          29 VTGATGGVGGIAVS-MLNKRGYDVVASTGNREAADYLKQLG--ASEVISRE---DVYDGTLKALSKQQWQGAVDPVGGK-  101 (167)
T ss_dssp             EESTTSHHHHHHHH-HHHHHTCCEEEEESSSSTHHHHHHHT--CSEEEEHH---HHCSSCCCSSCCCCEEEEEESCCTH-
T ss_pred             EeCCcchHHHHHHH-HHHHcCCceEEEecCHHHHHHHHhhc--ccceEecc---chhchhhhcccCCCceEEEecCcHH-
Confidence            68999999998876 55554678888999888777654322  2222 111   1111111111  3799999998862 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcccccc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHV  130 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~  130 (230)
                                               .+...+..++++|+|+.++...+...+.
T Consensus       102 -------------------------~~~~~~~~l~~~G~iv~~G~~~g~~~~~  129 (167)
T d1tt7a2         102 -------------------------QLASLLSKIQYGGSVAVSGLTGGGEVPA  129 (167)
T ss_dssp             -------------------------HHHHHHTTEEEEEEEEECCCSSCSCEEE
T ss_pred             -------------------------HHHHHHHHhccCceEEEeeccCCCcccC
Confidence                                     1234556678899999999888754443

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.80  E-value=0.0039  Score=45.72  Aligned_cols=73  Identities=14%  Similarity=0.121  Sum_probs=50.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHH-HHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNS-IKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~-v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.| .||+|...+..+...|+.+|+.+++++++++-..+.--.  +|.++.+. .+...+.. . -..+|++|.+.|..
T Consensus        35 I~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~-~-g~G~d~vi~~~g~~  110 (176)
T d1d1ta2          35 VFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEM-T-GNNVGYTFEVIGHL  110 (176)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHH-H-TSCCCEEEECSCCH
T ss_pred             EEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHh-c-cccceEEEEeCCch
Confidence            344 599999999999999888999999999998865443222  44444333 23333322 2 23799999999963

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.77  E-value=0.0004  Score=51.48  Aligned_cols=96  Identities=18%  Similarity=0.095  Sum_probs=58.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||+||+|.......... +..|+.+++++++.+... .+..   +|..+++..+.    +.  ....|.+|.+.|.. 
T Consensus        37 V~gasGGVG~~aiQlAk~~-Ga~Via~~~~~~k~~~~~-~lGad~vi~~~~~~~~~~----l~--~~~~~~vvD~Vgg~-  107 (177)
T d1o89a2          37 VTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLK-SLGASRVLPRDEFAESRP----LE--KQVWAGAIDTVGDK-  107 (177)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHH-HHTEEEEEEGGGSSSCCS----SC--CCCEEEEEESSCHH-
T ss_pred             EEEccccchHHHHHHHHHc-CCCeEEEecchhHHHHHH-hhccccccccccHHHHHH----HH--hhcCCeeEEEcchH-
Confidence            6899999999877655444 668888888888765443 2221   33322221111    11  12457777776631 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcccccc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHV  130 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~~~~~  130 (230)
                                               .....++.++.+|+||.++...+...+.
T Consensus       108 -------------------------~~~~~l~~l~~~Griv~~G~~~~~~~~~  135 (177)
T d1o89a2         108 -------------------------VLAKVLAQMNYGGCVAACGLAGGFTLPT  135 (177)
T ss_dssp             -------------------------HHHHHHHTEEEEEEEEECCCTTCSCCCC
T ss_pred             -------------------------HHHHHHHHhccccceEeecccCCccccc
Confidence                                     1344556778899999998877754433

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.73  E-value=0.0025  Score=46.93  Aligned_cols=114  Identities=14%  Similarity=-0.023  Sum_probs=62.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC----C--eEEEEecCc--chhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD----G--IIYLTARDA--SRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~----~--~vi~~~r~~--~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      ||||+|.||.+++..|+...-    .  .+.+.+...  ..++....++..+-......+.. -....+.+...|++|..
T Consensus        29 I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~~~~~~~aDvVvi~  107 (175)
T d7mdha1          29 VSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDPYEVFEDVDWALLI  107 (175)
T ss_dssp             EETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCHHHHTTTCSEEEEC
T ss_pred             EECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccchhhccCCceEEEe
Confidence            789999999999999997421    1  334444433  23444444444421111000000 00111223489999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      +|...      .+.+...+.+..|..=.-.+.+.+.++-.+...|+.++
T Consensus       108 ag~~r------kpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         108 GAKPR------GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             CCCCC------CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             eccCC------CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99853      22334455667776655556666554444456666665

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.48  E-value=0.0029  Score=45.47  Aligned_cols=108  Identities=16%  Similarity=0.111  Sum_probs=60.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC--------eEEEEecCcchhHHHHHhhhcc------cCCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG--------IIYLTARDASRGQEALEKLQKL------DILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~--------~vi~~~r~~~~~~~~~~~~~~~------D~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      |+||+|.+|..++..|+...-.        .++....+.+.++.....+..+      .+....+..+.       +..-
T Consensus         9 IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~a   81 (154)
T d1y7ta1           9 VTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA-------FKDA   81 (154)
T ss_dssp             ESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH-------TTTC
T ss_pred             EECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh-------cccc
Confidence            6899999999999999986421        1222233444444444444331      11111222222       2479


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      |++|.++|....      +.+.-.+.+..|+.=.-.+.+.+.++-.+.+.|+.+|
T Consensus        82 dvViitaG~~~~------pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          82 DYALLVGAAPRK------AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             SEEEECCCCCCC------TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cEEEeecCcCCC------CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            999999998531      1222344566666665566665554434456666665

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.38  E-value=0.0039  Score=45.35  Aligned_cols=61  Identities=20%  Similarity=0.175  Sum_probs=46.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+||.+++++..|.+.|...|.+..|+.++.+...+.+...++....            ....|+|||+....
T Consensus        24 GaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~------------~~~~DliINaTpiG   84 (167)
T d1npya1          24 GSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE------------NQQADILVNVTSIG   84 (167)
T ss_dssp             CSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT------------TCCCSEEEECSSTT
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc------------ccchhhheeccccC
Confidence            56999999999999998789999999999888777665432222111            13689999987764

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.16  E-value=0.012  Score=42.92  Aligned_cols=71  Identities=25%  Similarity=0.263  Sum_probs=50.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHH-HHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKN-SIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~-~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| .||+|...+..+...|..+|+.+++++++++...+ +-.   +|.++.+ .+.+.......  +.+|++|.++|.
T Consensus        33 V~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-lGa~~~i~~~~~d~~~~~~~~~~~~--~G~d~vid~~g~  107 (174)
T d1p0fa2          33 VFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGATECLNPKDYDKPIYEVICEKTN--GGVDYAVECAGR  107 (174)
T ss_dssp             EEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTCSEEECGGGCSSCHHHHHHHHTT--SCBSEEEECSCC
T ss_pred             EEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-cCCcEEEcCCCchhHHHHHHHHhcC--CCCcEEEEcCCC
Confidence            456 58999999999999988899999999998876644 222   4555433 24444443322  479999999986

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.14  E-value=0.0063  Score=45.35  Aligned_cols=110  Identities=15%  Similarity=0.088  Sum_probs=64.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |.| +|++|...+......|+..|+.+++++++++.+.+.-..  .|-.+. ++.+.+.++.+ -..+|++|.+.|....
T Consensus        31 V~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~-~~~~~i~~~t~-g~g~D~vid~vG~~~~  107 (195)
T d1kola2          31 VAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDT-PLHEQIAALLG-EPEVDCAVDAVGFEAR  107 (195)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSS-CHHHHHHHHHS-SSCEEEEEECCCTTCB
T ss_pred             EEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCc-CHHHHHHHHhC-CCCcEEEEECcccccc
Confidence            455 489998888777777788999999999888765443111  233333 33333333322 2369999999995321


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      .....          ..+..+.-..++..+..++++|+|+.++-.
T Consensus       108 ~~~~~----------~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~  142 (195)
T d1kola2         108 GHGHE----------GAKHEAPATVLNSLMQVTRVAGKIGIPGLY  142 (195)
T ss_dssp             CSSTT----------GGGSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             CCccc----------ceeecCcHHHHHHHHHHHhcCCEEEEeeec
Confidence            11000          001222223445555567899999998743

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.08  E-value=0.0065  Score=44.19  Aligned_cols=73  Identities=21%  Similarity=0.223  Sum_probs=52.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|+ +|+|...+..+...|+.+|+.+++++++.+...+.-..  .|..+ ++.+.+...+...  +.+|++|.+.|..
T Consensus        34 V~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~--~G~D~vid~~G~~  109 (176)
T d2jhfa2          34 VFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSN--GGVDFSFEVIGRL  109 (176)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTT--SCBSEEEECSCCH
T ss_pred             EECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhc--CCCCEEEecCCch
Confidence            4566 78999999999999889999999999998866554322  33333 2345555555433  4899999999973

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.05  E-value=0.018  Score=41.94  Aligned_cols=71  Identities=21%  Similarity=0.225  Sum_probs=49.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.| +|+||...+..+...|...|+.+++++++++...+ +-.   +|... ++..+....+...  +.+|++|.++|.
T Consensus        34 V~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~~~--~G~d~vie~~G~  108 (174)
T d1e3ia2          34 VFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGATDCLNPRELDKPVQDVITELTA--GGVDYSLDCAGT  108 (174)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEECGGGCSSCHHHHHHHHHT--SCBSEEEESSCC
T ss_pred             EEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-hCCCcccCCccchhhhhhhHhhhhc--CCCcEEEEeccc
Confidence            454 69999999998888877799999999988765443 322   34332 2244445444432  489999999996

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.04  E-value=0.015  Score=41.60  Aligned_cols=112  Identities=12%  Similarity=-0.000  Sum_probs=64.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCC----CHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDIL----DKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s----~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.|+ |.+|..++..|+..+...+++.+.++++++.....+..    ++..    .....+...       ..-|++|.+
T Consensus        12 IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~-------~~adiVvit   83 (154)
T d1pzga1          12 MIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAAL-------TGADCVIVT   83 (154)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHH-------TTCSEEEEC
T ss_pred             EECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhh-------cCCCeEEEe
Confidence            4575 99999999999998767899999998887766655543    1111    111122222       268999999


Q ss_pred             cCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          73 AAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        73 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      +|........+.. ..-...+..|..-...+++.+.++ .+++-++++|.
T Consensus        84 ag~~~~~g~~~~~-~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviivsN  131 (154)
T d1pzga1          84 AGLTKVPGKPDSE-WSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVTN  131 (154)
T ss_dssp             CSCSSCTTCCGGG-CCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECCS
T ss_pred             cccccCCCCCCcc-cchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEeCC
Confidence            9986321111110 112234455554444444444321 23566777664

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.96  E-value=0.0059  Score=44.20  Aligned_cols=92  Identities=17%  Similarity=0.259  Sum_probs=56.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.|+ |++|...+..+... +..|+.+++++++++...+ +-.   .|..++...   .+   ...+.+|.++.+.|...
T Consensus        33 I~Ga-G~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~a~~-lGa~~~i~~~~~~~~---~~---~~~~~~d~vi~~~~~~~  103 (168)
T d1piwa2          33 IVGL-GGIGSMGTLISKAM-GAETYVISRSSRKREDAMK-MGADHYIATLEEGDW---GE---KYFDTFDLIVVCASSLT  103 (168)
T ss_dssp             EECC-SHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH-HTCSEEEEGGGTSCH---HH---HSCSCEEEEEECCSCST
T ss_pred             EECC-CCcchhHHHHhhhc-cccccccccchhHHHHhhc-cCCcEEeeccchHHH---HH---hhhcccceEEEEecCCc
Confidence            4565 89999877765566 5678889999888876543 221   333332221   11   22357899999988643


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                      +..+.                       ..+..++++|++++++-..
T Consensus       104 ~~~~~-----------------------~~~~~l~~~G~iv~~G~~~  127 (168)
T d1piwa2         104 DIDFN-----------------------IMPKAMKVGGRIVSISIPE  127 (168)
T ss_dssp             TCCTT-----------------------TGGGGEEEEEEEEECCCCC
T ss_pred             cchHH-----------------------HHHHHhhccceEEEecccc
Confidence            21111                       2345668889999987433

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.87  E-value=0.016  Score=41.50  Aligned_cols=93  Identities=17%  Similarity=0.195  Sum_probs=58.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.| +|++|...+..+... +..|+.+++++++++...+ +..   +|.++++..+.+.+    ...+.+.+|.+++.. 
T Consensus        33 V~G-aG~vG~~~~~~ak~~-G~~Vi~~~~~~~~~~~a~~-~Ga~~~i~~~~~~~~~~~~~----~~~g~~~~i~~~~~~-  104 (166)
T d1llua2          33 ISG-IGGLGHVAVQYARAM-GLHVAAIDIDDAKLELARK-LGASLTVNARQEDPVEAIQR----DIGGAHGVLVTAVSN-  104 (166)
T ss_dssp             EEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TTCSEEEETTTSCHHHHHHH----HHSSEEEEEECCSCH-
T ss_pred             Eee-ccccHHHHHHHHHHc-CCccceecchhhHHHhhhc-cCccccccccchhHHHHHHH----hhcCCcccccccccc-
Confidence            345 599999877766555 5789999999888776543 321   56666665555443    224566666666542 


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                               +               .++..++.++++|+++.++-..+
T Consensus       105 ---------~---------------~~~~~~~~l~~~G~iv~~G~~~~  128 (166)
T d1llua2         105 ---------S---------------AFGQAIGMARRGGTIALVGLPPG  128 (166)
T ss_dssp             ---------H---------------HHHHHHTTEEEEEEEEECCCCSS
T ss_pred             ---------h---------------HHHHHHHHhcCCcEEEEEEecCC
Confidence                     1               12334566788899999875443

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.83  E-value=0.0017  Score=46.67  Aligned_cols=113  Identities=12%  Similarity=0.051  Sum_probs=64.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc------cCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL------DILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~------D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |.| +|.+|.+++..|..++-..++++++++++.+....++..+      +.....      ....+....-|++|.++|
T Consensus         8 IIG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~------~~~~~~~~~advvvitag   80 (150)
T d1t2da1           8 LVG-SGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG------SNTYDDLAGADVVIVTAG   80 (150)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE------ECCGGGGTTCSEEEECCS
T ss_pred             EEC-CCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEe------cccccccCCCcEEEEecc
Confidence            457 4999999999998887779999999998777665554431      110000      000122347899999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      ........+... .-...+..|..-...+++.+.+. .+++.++++|-
T Consensus        81 ~~~~~g~~~~~~-~R~~l~~~N~~iv~~i~~~i~~~-~p~aivivvtN  126 (150)
T d1t2da1          81 FTKAPGKSDKEW-NRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIVVTN  126 (150)
T ss_dssp             CSSCTTCCSTTC-CGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECSS
T ss_pred             cccCCCCCcccc-chhHHHHHHHHHHHHHHHHHHhc-CCCeEEEEecC
Confidence            754211111111 12234555654444444433322 24566777664

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.78  E-value=0.013  Score=42.04  Aligned_cols=63  Identities=13%  Similarity=0.122  Sum_probs=46.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |+|.+|+.+|+.|+++ ++.|++.+|+.++++...+.+..     .+..+.......+.       ..|.++....
T Consensus         9 GaG~~G~~~a~~L~~~-g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~-------~~~~~i~~~~   76 (182)
T d1e5qa1           9 GSGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA-------KHDLVISLIP   76 (182)
T ss_dssp             CCSTTHHHHHHHHHTT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT-------TSSEEEECSC
T ss_pred             CCCHHHHHHHHHHHhC-CCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhh-------ccceeEeecc
Confidence            4599999999999999 55899999999999988877654     34445555544443       5667665443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.78  E-value=0.0019  Score=45.81  Aligned_cols=106  Identities=16%  Similarity=0.098  Sum_probs=62.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhc--------ccCCCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQK--------LDILDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~--------~D~s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      |+|+ |.+|.+++..|+..+- ..+++.++++++++.....+..        ..+.....        .+.+..-|++|.
T Consensus         5 IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~--------~~~~~dadvvvi   75 (142)
T d1guza1           5 VIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND--------YADTANSDIVII   75 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC--------GGGGTTCSEEEE
T ss_pred             EECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC--------HHHhcCCeEEEE
Confidence            5675 8999999999999863 5899999999887765544432        11110011        112347899999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      ++|.....   ..+   -...+..|..=...+++.+.++ .+++-++++|-
T Consensus        76 tag~~~~~---g~~---r~~l~~~N~~i~~~i~~~i~~~-~p~aivivvtN  119 (142)
T d1guza1          76 TAGLPRKP---GMT---REDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVSN  119 (142)
T ss_dssp             CCSCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHH-CSSCEEEECCS
T ss_pred             EEecCCCC---CCc---hHHHHHHHHHHHHHHHHHhhcc-CCCeEEEEecC
Confidence            99975311   111   2334455554444444444332 24566676654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.70  E-value=0.0081  Score=42.97  Aligned_cols=108  Identities=16%  Similarity=0.090  Sum_probs=55.2

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC------eEEEEecCcc--hhHHHHHhhhccc------CCCHHHHHHHHHHHHhhcCCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG------IIYLTARDAS--RGQEALEKLQKLD------ILDKNSIKALHDHLEAEHGGV   66 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~------~vi~~~r~~~--~~~~~~~~~~~~D------~s~~~~v~~~~~~~~~~~~~i   66 (230)
                      |+||+|.+|.+++..|+..+-.      .+++.+.+..  +++....++..+-      +.-.....+.       +...
T Consensus         8 IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~   80 (154)
T d5mdha1           8 VTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIA-------FKDL   80 (154)
T ss_dssp             ESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHH-------TTTC
T ss_pred             EECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccc-------cCCc
Confidence            6899999999999999875322      3555554433  2333322222211      1111111222       3479


Q ss_pred             cEEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          67 DVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        67 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      |++|.++|......   .+   -.+.++.|..=.-.+.+.+.++-.+.+.+|.+|
T Consensus        81 dvVVitag~~~~~g---~s---r~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          81 DVAILVGSMPRRDG---ME---RKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             SEEEECCSCCCCTT---CC---TTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             eEEEEecccCCCCC---Cc---hhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            99999999864211   11   122345555444444444433223345555555

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.69  E-value=0.015  Score=41.88  Aligned_cols=90  Identities=18%  Similarity=0.200  Sum_probs=55.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.| +|++|...+..+... +..++.+++++++.+.. .++..   +|..+++....       ...++|++|.++|...
T Consensus        36 I~G-aG~vG~~a~qlak~~-Ga~~i~~~~~~~~~~~a-~~lGad~~i~~~~~~~~~~-------~~~~~D~vid~~g~~~  105 (168)
T d1uufa2          36 VVG-IGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAA-KALGADEVVNSRNADEMAA-------HLKSFDFILNTVAAPH  105 (168)
T ss_dssp             EEC-CSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHH-HHHTCSEEEETTCHHHHHT-------TTTCEEEEEECCSSCC
T ss_pred             Eec-cchHHHHHHHHhhcc-cccchhhccchhHHHHH-hccCCcEEEECchhhHHHH-------hcCCCceeeeeeecch
Confidence            455 489998877666556 55666788877776543 33332   56666554322       2247999999998631


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                             +.                  +..+..+++.|+++.++...+
T Consensus       106 -------~~------------------~~~~~~l~~~G~iv~~G~~~~  128 (168)
T d1uufa2         106 -------NL------------------DDFTTLLKRDGTMTLVGAPAT  128 (168)
T ss_dssp             -------CH------------------HHHHTTEEEEEEEEECCCC--
T ss_pred             -------hH------------------HHHHHHHhcCCEEEEeccCCC
Confidence                   11                  223346688899999875444

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.66  E-value=0.011  Score=42.82  Aligned_cols=71  Identities=18%  Similarity=0.211  Sum_probs=49.7

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCC-HHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILD-KNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~-~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+ +|+|...+..+...|+.+|+.+++++++++... ++-.   +|..+ .+.+.+.+++...  +.+|++|.+.|.
T Consensus        34 I~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~~~~~~~~~~~~~~~--~g~D~vid~~G~  108 (176)
T d2fzwa2          34 VFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQDFSKPIQEVLIEMTD--GGVDYSFECIGN  108 (176)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGGCSSCHHHHHHHHTT--SCBSEEEECSCC
T ss_pred             Eecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEEeCCchhhHHHHHHHHHcC--CCCcEeeecCCC
Confidence            3465 699999998888887789999999888876543 3322   44443 3455555555433  479999999986

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.66  E-value=0.0038  Score=44.55  Aligned_cols=113  Identities=15%  Similarity=0.126  Sum_probs=63.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |.|+ |.+|.+++..|+.++. ..|++.++++++++....++..+.......+. ....-.+.+..-|++|.++|.....
T Consensus        11 IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~-~~~~d~~~l~daDvvvitag~~~~~   88 (148)
T d1ldna1          11 VIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVD-IWHGDYDDCRDADLVVICAGANQKP   88 (148)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCE-EEECCGGGTTTCSEEEECCSCCCCT
T ss_pred             EECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeE-EEECCHHHhccceeEEEeccccccc
Confidence            5675 9999999999999864 47999999998877666666541110000000 0000012234679999999975321


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                         ..   .-.+.+..|..=.-.+++.+.++ .+++.++++|-
T Consensus        89 ---~~---~R~dl~~~N~~i~~~i~~~i~~~-~p~a~~ivvtN  124 (148)
T d1ldna1          89 ---GE---TRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVATN  124 (148)
T ss_dssp             ---TT---CSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEECSS
T ss_pred             ---Cc---chhHHHHHHHHHHHHHHHHHHhh-CCCceEEEecC
Confidence               11   11233444544333444444322 24567777763

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=95.59  E-value=0.019  Score=41.51  Aligned_cols=64  Identities=19%  Similarity=0.291  Sum_probs=47.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcc---cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~---D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |+||.+++++..|.+.|. .|.+..|+.++.+...+.+...   ...+.++.         .....|++||+.....
T Consensus        25 GaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~---------~~~~~dliIN~Tp~G~   91 (170)
T d1nyta1          25 GAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDEL---------EGHEFDLIINATSSGI   91 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG---------TTCCCSEEEECCSCGG
T ss_pred             CCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcccccccccccc---------cccccceeecccccCc
Confidence            579999999999999965 7999999999999888777641   11111111         1236899999987654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=95.57  E-value=0.047  Score=38.48  Aligned_cols=111  Identities=14%  Similarity=0.106  Sum_probs=59.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |.| +|.+|..+|..|+.+|- ..|+++++++++.+....++..+........ ..... .+....-|++|.++|.... 
T Consensus        10 IIG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~-~~~~d-~~~~~~adivvitag~~~~-   85 (146)
T d1ez4a1          10 LVG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKK-IYSGE-YSDCKDADLVVITAGAPQK-   85 (146)
T ss_dssp             EEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCE-EEECC-GGGGTTCSEEEECCCC----
T ss_pred             EEC-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCce-Eeecc-HHHhccccEEEEecccccC-
Confidence            457 48999999999999963 5899999999877766555543100000000 00000 0123468999999997531 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                           ..+.-.+.+..|+.-...+++.+.++ .+++.++++|
T Consensus        86 -----~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt  121 (146)
T d1ez4a1          86 -----PGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA  121 (146)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence                 11222334555554444444444321 2345666655

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.51  E-value=0.0096  Score=41.19  Aligned_cols=64  Identities=17%  Similarity=0.247  Sum_probs=48.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh----cccCCCHHHHHHHHHHHHhhcCCCcEEEEc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----KLDILDKNSIKALHDHLEAEHGGVDVLVNN   72 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~----~~D~s~~~~v~~~~~~~~~~~~~id~lv~~   72 (230)
                      |.|+ |-+|+.+++.|.++ +..|++++.+++..+...+++.    ..|.++++.++++-      ....|.++..
T Consensus         5 I~G~-G~~G~~la~~L~~~-g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~------i~~a~~vv~~   72 (132)
T d1lssa_           5 IAGI-GRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAG------IEDADMYIAV   72 (132)
T ss_dssp             EECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTT------TTTCSEEEEC
T ss_pred             EECC-CHHHHHHHHHHHHC-CCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcC------hhhhhhhccc
Confidence            3454 99999999999998 6788999999998887766542    27999998777652      2367777754

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.32  E-value=0.011  Score=42.93  Aligned_cols=67  Identities=21%  Similarity=0.243  Sum_probs=46.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |+||.+++++..|.+. +..|++..|+.++++...+.+.. .++...+.-       .......|++||+......
T Consensus        25 GaGGaarai~~aL~~~-~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-------~~~~~~~diiIN~tp~g~~   92 (171)
T d1p77a1          25 GAGGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQPYGNIQAVSMD-------SIPLQTYDLVINATSAGLS   92 (171)
T ss_dssp             CCSHHHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-------GCCCSCCSEEEECCCC---
T ss_pred             CCcHHHHHHHHHHccc-CceeeeccchHHHHHHHHHHHhhccccchhhhc-------cccccccceeeeccccccc
Confidence            6799999999999875 78999999999999988887764 111111100       1123578999999887643

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.25  E-value=0.0038  Score=44.25  Aligned_cols=106  Identities=17%  Similarity=0.105  Sum_probs=58.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHH-----HHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHD-----HLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~-----~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+ |.+|.++|..|+.++-..+++.+.++++.+.....+..     .......-.     .-.+....-|++|.+||.
T Consensus         6 IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~-----~~~~~~~~~~i~~~~d~~~~~~advvvitag~   79 (142)
T d1uxja1           6 IIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE-----ASPIEGFDVRVTGTNNYADTANSDVIVVTSGA   79 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHT-----THHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred             EECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhc-----cccccCCCCEEEecCcHHHhcCCCEEEEeeec
Confidence            4575 99999999999999777899999988877665554432     111000000     001122368999999997


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecC
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSS  122 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS  122 (230)
                      ...      ..+.-.+.+..|..    +++.+.+.+.   +++.++.+|-
T Consensus        80 ~~~------~~~~r~dl~~~N~~----i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          80 PRK------PGMSREDLIKVNAD----ITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             C---------------CHHHHHH----HHHHHHHHHGGGCTTCEEEECSS
T ss_pred             cCC------cCcchhHHHhHHHH----HHHHHHHHHhccCCCceEEEeCC
Confidence            531      11222334555553    3444444333   3466666553

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.20  E-value=0.062  Score=38.18  Aligned_cols=71  Identities=15%  Similarity=0.139  Sum_probs=51.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh------------hccc----CCCHHHHHHHHHHHHhhcCCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------------QKLD----ILDKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~------------~~~D----~s~~~~v~~~~~~~~~~~~~id   67 (230)
                      |.|-+|.++++.|.+. ++.|+..+|+++..+...+.-            ..+|    ....+.++++++++.....+=.
T Consensus         7 G~G~mG~~lA~~l~~~-g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~~~~~~vl~~l~~~l~~~~   85 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQLILPTLEKLIPHLSPTA   85 (165)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCHHHHHHHHHHHGGGSCTTC
T ss_pred             eecHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcHhhhhhhhhhhhhhccccc
Confidence            4588999999999998 668888999988777654421            1144    3457788889998877666666


Q ss_pred             EEEEccCC
Q psy7994          68 VLVNNAAI   75 (230)
Q Consensus        68 ~lv~~ag~   75 (230)
                      ++++.++.
T Consensus        86 iv~~~~s~   93 (165)
T d2f1ka2          86 IVTDVASV   93 (165)
T ss_dssp             EEEECCSC
T ss_pred             ceeecccc
Confidence            67666554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.19  E-value=0.06  Score=37.86  Aligned_cols=107  Identities=17%  Similarity=0.138  Sum_probs=63.0

Q ss_pred             CCCCCCcHHHHHHHHHHHh-c-CCeEEEEecCcchhHHHHHhhhcccC-------CCHHHHHHHHHHHHhhcCCCcEEEE
Q psy7994           1 VTGANKGIGYGIVKGLIQQ-F-DGIIYLTARDASRGQEALEKLQKLDI-------LDKNSIKALHDHLEAEHGGVDVLVN   71 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~-g-~~~vi~~~r~~~~~~~~~~~~~~~D~-------s~~~~v~~~~~~~~~~~~~id~lv~   71 (230)
                      |+|++|.+|.+++..|+.+ + ...+++.+..+ ..+....++..++.       ...++.+. +       ..-|++|.
T Consensus         5 IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~-~-------~~aDvvvi   75 (145)
T d2cmda1           5 VLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA-L-------EGADVVLI   75 (145)
T ss_dssp             EETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH-H-------TTCSEEEE
T ss_pred             EEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc-c-------CCCCEEEE
Confidence            6799999999999988754 3 46888888754 45544455544211       11112222 1       25799999


Q ss_pred             ccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          72 NAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        72 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                      ++|.... +     .+.-.+.+..|..=.-.+.+.+.++- +++.+|.+|..
T Consensus        76 taG~~~k-~-----g~~R~dl~~~N~~i~~~v~~~i~~~~-p~aivivvtNP  120 (145)
T d2cmda1          76 SAGVRRK-P-----GMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNP  120 (145)
T ss_dssp             CCSCCCC-T-----TCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSS
T ss_pred             CCCccCC-C-----CcchhhHHHHHHHHHHHHHHHHHhhC-CCcEEEEccCC
Confidence            9998531 1     12233456666555555555554322 45667777643

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.07  E-value=0.019  Score=40.46  Aligned_cols=111  Identities=16%  Similarity=0.122  Sum_probs=61.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccC-CCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDI-LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~-s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |.|+ |.+|.+++..|+.++- ..+++.++++++++....++..+.. .....+   ...-.+.+..-|++|.++|....
T Consensus         6 IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~---~~~~~~~~~~adivvitag~~~~   81 (142)
T d1y6ja1           6 IIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSL---YAGDYSDVKDCDVIVVTAGANRK   81 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEE---C--CGGGGTTCSEEEECCCC---
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeE---eeCcHHHhCCCceEEEecccccC
Confidence            4675 9999999999999865 3799999999877666666654211 111000   11112234578999999997531


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                            +.+.-...+..|..=...+++.+.++ .+++.++++|-
T Consensus        82 ------~~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai~ivvtN  118 (142)
T d1y6ja1          82 ------PGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSN  118 (142)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSS
T ss_pred             ------cCcchhHHhhHHHHHHHHHHHHhhcc-CCCceEEEecC
Confidence                  11223345566665444444444331 24566666653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.92  E-value=0.065  Score=38.67  Aligned_cols=71  Identities=10%  Similarity=0.128  Sum_probs=51.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh---------------c---------ccCCCHHHHHHHHHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------------K---------LDILDKNSIKALHDHL   59 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~---------------~---------~D~s~~~~v~~~~~~~   59 (230)
                      |-|-+|..+|+.|++. ++.|+..+|++++.++..+.-.               +         ..+.+.+.+....+.+
T Consensus         9 GlG~MG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~v~~~l   87 (176)
T d2pgda2           9 GLAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKL   87 (176)
T ss_dssp             CCSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHHHHH
T ss_pred             eEhHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHHHHHHH
Confidence            3478999999999999 6688899999988877654311               0         3555667777777777


Q ss_pred             HhhcCCCcEEEEccCC
Q psy7994          60 EAEHGGVDVLVNNAAI   75 (230)
Q Consensus        60 ~~~~~~id~lv~~ag~   75 (230)
                      .....+=+++|.+...
T Consensus        88 ~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          88 VPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHCCTTCEEEECSCC
T ss_pred             HhccccCcEEEecCcc
Confidence            7666555677766544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.89  E-value=0.031  Score=40.22  Aligned_cols=70  Identities=16%  Similarity=0.125  Sum_probs=48.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCCHHH-HHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILDKNS-IKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~~~~-v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |++|+|...+..++..|+.+|+.+++++++++...+.=-.  +|.++++. +++.......  +.+|+++.+.|.
T Consensus        36 G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~--~G~d~vid~~G~  108 (175)
T d1cdoa2          36 GLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTN--GGVDFSLECVGN  108 (175)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHT--SCBSEEEECSCC
T ss_pred             ecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhcc--CCcceeeeecCC
Confidence            4578888888889999888999999999988765442111  55554443 3344443322  379999999996

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=94.83  E-value=0.079  Score=37.96  Aligned_cols=35  Identities=17%  Similarity=0.030  Sum_probs=29.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE   39 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~   39 (230)
                      |+|.+|.++|..|+++ ++.|.+.+|++++.+...+
T Consensus         8 GaG~~G~~~A~~l~~~-G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           8 GLGNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH
Confidence            4589999999999999 5689999999888776654

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=94.71  E-value=0.1  Score=36.57  Aligned_cols=73  Identities=15%  Similarity=0.144  Sum_probs=46.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhc-CCeEEEEecCcchhHHHHHhhhcc--cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQF-DGIIYLTARDASRGQEALEKLQKL--DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g-~~~vi~~~r~~~~~~~~~~~~~~~--D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.| +|.+|..++..|+.+| ...+++.++++++++....++..+  .......+.   ..-.+.+..-|++|.++|...
T Consensus         6 IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~---~~d~~~l~~adiVVitaG~~~   81 (146)
T d1hyha1           6 IIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV---INDWAALADADVVISTLGNIK   81 (146)
T ss_dssp             EEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE---ESCGGGGTTCSEEEECCSCGG
T ss_pred             EEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCcccee---ccCHHHhccccEEEEeccccc
Confidence            467 5899999999999986 358999999988877665555431  000000000   000112236899999999753

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=94.67  E-value=0.025  Score=35.40  Aligned_cols=36  Identities=25%  Similarity=0.194  Sum_probs=28.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEA   37 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~   37 (230)
                      |+||+||+|......+... +.+|+.+.+++++.+..
T Consensus        37 I~gasGgVG~~aiQlak~~-G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          37 VTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             ESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHH
T ss_pred             EEeCCCcHHHHHHHHHHHc-CCeEEEEECCHHHHHHH
Confidence            6899999999888755555 66888888888776644

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.66  E-value=0.0097  Score=42.02  Aligned_cols=110  Identities=18%  Similarity=0.159  Sum_probs=63.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhc----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQK----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|+ |.+|.++|..|+.++- ..+++.++++++++....++..    ++....  +.  ...-.+.+..-|++|..+|.
T Consensus         5 IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~--i~--~~~d~~~~~~adiVvitag~   79 (142)
T d1ojua1           5 FVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK--IV--GGADYSLLKGSEIIVVTAGL   79 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCE--EE--EESCGGGGTTCSEEEECCCC
T ss_pred             EECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCc--cc--cCCCHHHhccccEEEEeccc
Confidence            4575 9999999999998864 4799999998887665555443    111100  00  00001123468999999997


Q ss_pred             ccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          76 AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      ...      +...-.+.+..|..=...+++.+.++ .+++.++.+|-
T Consensus        80 ~~~------~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aivivvtN  119 (142)
T d1ojua1          80 ARK------PGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTN  119 (142)
T ss_dssp             CCC------SSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSS
T ss_pred             cCC------CCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEEecC
Confidence            431      11223445555555445555544432 23466666653

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=94.65  E-value=0.16  Score=35.43  Aligned_cols=110  Identities=15%  Similarity=0.090  Sum_probs=60.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCc--chhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDA--SRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~--~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |.|++|.+|.++|..++.++.. .+++.+.+.  +..+....++..   .+....  +..  .. .+....-|++|.+||
T Consensus         5 IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~--i~~--~~-~~~~~~aDiVvitaG   79 (142)
T d1o6za1           5 VVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTR--VRQ--GG-YEDTAGSDVVVITAG   79 (142)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCE--EEE--CC-GGGGTTCSEEEECCC
T ss_pred             EECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCce--Eee--CC-HHHhhhcCEEEEecc
Confidence            5799999999999999998654 688888643  333333333332   111000  000  00 012247899999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      ... .+     .+.-.+.++.|..=.-.+.+.+.++ .+++.++.++-
T Consensus        80 ~~~-~~-----g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~ivvtN  120 (142)
T d1o6za1          80 IPR-QP-----GQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN  120 (142)
T ss_dssp             CCC-CT-----TCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred             ccc-cc-----CCchhhHHHHHHHHHHHHHHHHHhc-CCCceEEEecC
Confidence            742 11     1223445666655444444444321 13466666653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.59  E-value=0.071  Score=37.34  Aligned_cols=74  Identities=12%  Similarity=0.036  Sum_probs=50.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh-hhc-ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK-LQK-LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~-~~~-~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.||.|-+|..+++.|.+. ++.|.+.+|+.......... ..- ........+...+.++.....+=.+++..++.
T Consensus        14 iIGg~G~mG~~la~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~Sv   89 (152)
T d2pv7a2          14 IVGGYGKLGGLFARYLRAS-GYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLTSV   89 (152)
T ss_dssp             EETTTSHHHHHHHHHHHTT-TCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCSC
T ss_pred             EEcCCCHHHHHHHHHHHHc-CCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCCceEEEeccc
Confidence            4578899999999999999 66888888877655543322 211 34456667778888777665544466666554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.48  E-value=0.017  Score=40.83  Aligned_cols=95  Identities=15%  Similarity=0.096  Sum_probs=56.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcc--hhHHHHHhhhc------ccCC----CHHHHHHHHHHHHhhcCCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDAS--RGQEALEKLQK------LDIL----DKNSIKALHDHLEAEHGGVD   67 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~--~~~~~~~~~~~------~D~s----~~~~v~~~~~~~~~~~~~id   67 (230)
                      |.|++|.+|..++..|+.++- ..+++++++++  +++....++..      .++.    ..+..        +.+..-|
T Consensus         5 IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~--------~~l~~aD   76 (145)
T d1hyea1           5 IIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL--------RIIDESD   76 (145)
T ss_dssp             EETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG--------GGGTTCS
T ss_pred             EECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH--------HHhccce
Confidence            579999999999999999863 58999988764  34434444332      1110    00011        1224689


Q ss_pred             EEEEccCCccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcc
Q psy7994          68 VLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP  109 (230)
Q Consensus        68 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  109 (230)
                      ++|.+||....   ...+   -...++.|..=.-.+.+.+.+
T Consensus        77 vVVitAG~~~~---~g~s---R~dl~~~Na~iv~~i~~~i~~  112 (145)
T d1hyea1          77 VVIITSGVPRK---EGMS---RMDLAKTNAKIVGKYAKKIAE  112 (145)
T ss_dssp             EEEECCSCCCC---TTCC---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecccccC---CCCC---hhhhhhhhHHHHHHHHHHHhc
Confidence            99999997431   1122   234556666555555555543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=94.46  E-value=0.094  Score=37.48  Aligned_cols=113  Identities=12%  Similarity=0.090  Sum_probs=63.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |.|+ |.+|.+++..|+.+|. ..+++++++++..+....++..+......... .-..-.+.+..-|++|..||.... 
T Consensus        25 IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~-~~~~d~~~~~~adiVVitAg~~~~-  101 (160)
T d1i0za1          25 VVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKI-VADKDYSVTANSKIVVVTAGVRQQ-  101 (160)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEE-EECSSGGGGTTCSEEEECCSCCCC-
T ss_pred             EECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeE-EeccchhhcccccEEEEecCCccc-
Confidence            4575 8999999999999975 47999999988877766666542111000000 000001123468999999997532 


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      +  ..+   -...+..|..=.-.+++.+.+. .+++-+|++|-
T Consensus       102 ~--g~t---R~~l~~~N~~i~~~i~~~i~~~-~p~aiiivvtN  138 (160)
T d1i0za1         102 E--GES---RLNLVQRNVNVFKFIIPQIVKY-SPDCIIIVVSN  138 (160)
T ss_dssp             T--TCC---GGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSS
T ss_pred             c--Ccc---hHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCC
Confidence            1  122   2234444544333333333321 23466777764

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.29  E-value=0.059  Score=38.24  Aligned_cols=91  Identities=19%  Similarity=0.133  Sum_probs=55.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVN   80 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~   80 (230)
                      |+|++|...+..+... +..|+.+++++++++...+ +..   .|.++.+..+.+. +.   ....|.+|.+++..    
T Consensus        35 G~G~iG~~a~~~a~~~-g~~v~~~~~~~~r~~~~k~-~Ga~~~~~~~~~~~~~~~~-~~---~~~~~~~v~~~~~~----  104 (168)
T d1rjwa2          35 GIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE-LGADLVVNPLKEDAAKFMK-EK---VGGVHAAVVTAVSK----  104 (168)
T ss_dssp             CCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-TTCSEEECTTTSCHHHHHH-HH---HSSEEEEEESSCCH----
T ss_pred             ecccchhhhhHHHhcC-CCeEeccCCCHHHhhhhhh-cCcceecccccchhhhhcc-cc---cCCCceEEeecCCH----
Confidence            5699998876655555 5688889998888775533 322   4555544333332 22   23566666677642    


Q ss_pred             CCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCc
Q psy7994          81 SSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCG  125 (230)
Q Consensus        81 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~  125 (230)
                            +               .++..++.++++|+++.++-...
T Consensus       105 ------~---------------~~~~a~~~l~~~G~i~~~g~~~~  128 (168)
T d1rjwa2         105 ------P---------------AFQSAYNSIRRGGACVLVGLPPE  128 (168)
T ss_dssp             ------H---------------HHHHHHHHEEEEEEEEECCCCSS
T ss_pred             ------H---------------HHHHHHHHhccCCceEecccccC
Confidence                  1               23444556688899998864433

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.27  E-value=0.071  Score=37.86  Aligned_cols=71  Identities=11%  Similarity=0.143  Sum_probs=47.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh-----------hcc-----cCCCHHHHHHHH---HHHHhhcC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-----------QKL-----DILDKNSIKALH---DHLEAEHG   64 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~-----------~~~-----D~s~~~~v~~~~---~~~~~~~~   64 (230)
                      |.|-+|..+|+.|++. ++.|+..+|++++.+...+..           +++     -+.+.++++.++   +.+.....
T Consensus         7 GlG~MG~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~~~~~   85 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAK   85 (161)
T ss_dssp             CCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCC
T ss_pred             ehhHHHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchhhccC
Confidence            4578999999999999 668889999998877664422           123     356777777776   23443333


Q ss_pred             CCcEEEEccCC
Q psy7994          65 GVDVLVNNAAI   75 (230)
Q Consensus        65 ~id~lv~~ag~   75 (230)
                      +=+++|.+.-.
T Consensus        86 ~g~iiid~sT~   96 (161)
T d1vpda2          86 PGTVLIDMSSI   96 (161)
T ss_dssp             TTCEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            44556655443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=94.25  E-value=0.023  Score=39.04  Aligned_cols=65  Identities=11%  Similarity=0.078  Sum_probs=47.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|-+|..+++.|.++ +..|++++.+++..+........   +|.++++.++++-      ..+.|.+|...+-
T Consensus         7 G~G~~G~~la~~L~~~-g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~------i~~a~~vi~~~~~   74 (134)
T d2hmva1           7 GLGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLG------IRNFEYVIVAIGA   74 (134)
T ss_dssp             CCSHHHHHHHHHHHHT-TCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHT------GGGCSEEEECCCS
T ss_pred             CCCHHHHHHHHHHHHC-CCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccC------CccccEEEEEcCc
Confidence            3478999999999999 66788888898888776554433   7999988776651      1257877766553

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=94.10  E-value=0.044  Score=38.52  Aligned_cols=111  Identities=17%  Similarity=0.084  Sum_probs=61.9

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcccCCCHH-HHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKLDILDKN-SIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~D~s~~~-~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      |.|+ |.+|.+++..|+.++- ..+++.++++++++....++..++..... .+. .-+. .+....-|++|.++|....
T Consensus         6 IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~-~~~~-~~~~~daDvVVitaG~~~~   82 (143)
T d1llda1           6 VIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSID-GSDD-PEICRDADMVVITAGPRQK   82 (143)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEE-EESC-GGGGTTCSEEEECCCCCCC
T ss_pred             EECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceee-cCCC-HHHhhCCcEEEEecccccC
Confidence            4675 9999999999999865 47999999998877665555542111000 000 0000 1112357999999997421


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                         ...+   -.+.+..|..=.-.+++.+.++ .+++.++.+|
T Consensus        83 ---~g~~---R~dl~~~N~~i~~~i~~~i~~~-~p~ai~ivvt  118 (143)
T d1llda1          83 ---PGQS---RLELVGATVNILKAIMPNLVKV-APNAIYMLIT  118 (143)
T ss_dssp             ---TTCC---HHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred             ---CCCc---hhhhhhhhHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence               1122   2345555554333344433221 2346666665

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.88  E-value=0.29  Score=33.83  Aligned_cols=73  Identities=18%  Similarity=0.139  Sum_probs=45.8

Q ss_pred             CCCCCCcHHHHHHHHHHHhcC-CeEEEEecCcchhHHHHHhhhcc-cCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQEALEKLQKL-DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~-~~vi~~~r~~~~~~~~~~~~~~~-D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      |.|+ |.+|..++..++.++- ..+++.++++++++....++..+ .+.....+   ...-.+.+..-|++|.++|...
T Consensus         5 IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~---~~~~~~~~~~adivvitag~~~   79 (140)
T d1a5za1           5 IVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANI---YAGDYADLKGSDVVIVAAGVPQ   79 (140)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEE---EECCGGGGTTCSEEEECCCCCC
T ss_pred             EECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccc---cCCcHHHhcCCCEEEEeccccc
Confidence            4675 8999999999999864 48999999988777665554431 00000000   0000112346899999999853

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=93.60  E-value=0.021  Score=43.34  Aligned_cols=69  Identities=12%  Similarity=0.196  Sum_probs=44.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      .||-+|.+||+++..+|+.+.++.+........   .+....+...+++...+.   +.+...|++|++|.++..
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~---~~~~~~~~t~~~m~~~~~---~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPTPP---FVKRVDVMTALEMEAAVN---ASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCT---TEEEEECCSHHHHHHHHH---HHGGGCSEEEECCBCCSE
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhcccccCccc---ccccceehhhHHHHHHHH---hhhccceeEeeeechhhh
Confidence            578899999999999966655555544322211   122244555555544444   445578999999999753

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.51  E-value=0.03  Score=40.20  Aligned_cols=110  Identities=11%  Similarity=0.137  Sum_probs=63.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCcccc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKV   79 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~   79 (230)
                      |.|+ |.+|..+|..|+.++.. .+++++++++++.....++..+......... ....-.+....-|++|..+|.....
T Consensus        24 IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~-~~~~d~~~~~~adivvitag~~~~~  101 (159)
T d2ldxa1          24 VVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKI-VFGKDYNVSANSKLVIITAGARMVS  101 (159)
T ss_dssp             EECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEE-EEESSGGGGTTEEEEEECCSCCCCT
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeE-EeccchhhhccccEEEEecccccCC
Confidence            4674 99999999999998754 7999999988877776666542211000000 0000012234789999999985321


Q ss_pred             CCCCCChhHHHHHHHHhhhhHHHHHHHhccccc---CCceEEEecC
Q psy7994          80 NSSEPFGSQALHTMRTNYFALIDVCDILFPLLR---SHGRVVNVSS  122 (230)
Q Consensus        80 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~---~~g~ii~~sS  122 (230)
                      .   .+.   ...++.|    ..+.+.+.+.+.   .++.++.+|.
T Consensus       102 ~---~~R---~dll~~N----~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1         102 G---QTR---LDLLQRN----VAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             T---TCS---SCTTHHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             C---CCH---HHHHHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence            1   111   1122333    334555555543   3567777764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.18  E-value=0.14  Score=35.46  Aligned_cols=72  Identities=14%  Similarity=0.173  Sum_probs=49.1

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEE-EecCcchhHHHHHhhhc--ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYL-TARDASRGQEALEKLQK--LDILDKNSIKALHDHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~-~~r~~~~~~~~~~~~~~--~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~   75 (230)
                      |.|++|-+|+++++.+.+.....++. .++. +.+......=.+  +|+|.++.+...++.+.+.  ++-+|+=..|+
T Consensus         4 v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~-~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~--~~~~ViGTTG~   78 (135)
T d1yl7a1           4 VLGAKGKVGATMVRAVAAADDLTLSAELDAG-DPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDN--GIHAVVGTTGF   78 (135)
T ss_dssp             EETTTSHHHHHHHHHHHHSTTSEEEEEECTT-CCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             EECCCCHHHHHHHHHHHhCCCCEEEEEEecC-CchhhhccccCCEEEEcccHHHHHHHHHHHHhc--CCCEEEecccc
Confidence            57999999999999888864555443 3332 222222111011  7999999999999988775  67778877776

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.93  E-value=0.033  Score=38.39  Aligned_cols=68  Identities=12%  Similarity=0.198  Sum_probs=49.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc----ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~----~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.|++|-+|+++++.+.+++...+...+++...      .+..    +|+|.++.+.+.++.+.+.  ++-+|+=..|+.
T Consensus         5 i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~~~DVvIDFS~p~~~~~~l~~~~~~--~~p~ViGTTG~~   76 (128)
T d1vm6a3           5 IVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELDSPDVVIDFSSPEALPKTVDLCKKY--RAGLVLGTTALK   76 (128)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECSCCSEEEECSCGGGHHHHHHHHHHH--TCEEEECCCSCC
T ss_pred             EECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------HhccCCEEEEecCHHHHHHHHHHHHhc--CCCEEEEcCCCC
Confidence            579999999999998888855445455544321      1122    7999999999999988776  666788777763

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.82  E-value=0.26  Score=35.20  Aligned_cols=36  Identities=11%  Similarity=0.134  Sum_probs=30.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHh
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK   40 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~   40 (230)
                      |.|-+|..++++|++. ++.|...+|++++.+...+.
T Consensus         8 GlG~MG~~ma~~L~~~-G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEK-GFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHc
Confidence            4578899999999999 67889999999988877654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.26  E-value=0.05  Score=39.40  Aligned_cols=70  Identities=14%  Similarity=0.230  Sum_probs=45.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |+||.+++++..|.+.  ..|.+..|+.++.+...+.+......+.... --+..+.......|++||+....
T Consensus        25 GaGG~arai~~aL~~~--~~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dliIn~tp~g   94 (177)
T d1nvta1          25 GAGGAARAVAFELAKD--NNIIIANRTVEKAEALAKEIAEKLNKKFGEE-VKFSGLDVDLDGVDIIINATPIG   94 (177)
T ss_dssp             CCSHHHHHHHHHHTSS--SEEEEECSSHHHHHHHHHHHHHHHTCCHHHH-EEEECTTCCCTTCCEEEECSCTT
T ss_pred             CCcHHHHHHHHHHccc--cceeeehhhhhHHHHHHHHHHHhhchhhhhh-hhhhhhhhccchhhhhccCCccc
Confidence            6789999999999765  4899999999999888776653111111000 00111112234789999998765

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.10  E-value=0.55  Score=32.95  Aligned_cols=34  Identities=9%  Similarity=0.049  Sum_probs=28.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEAL   38 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~   38 (230)
                      |.|-+|.++|++|+++ ++.|.+.+|++++.+...
T Consensus         8 GlG~MG~~iA~~L~~~-g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           8 GLGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             CCSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHHC-CCeEEEEECchhhhhhhh
Confidence            4578999999999999 668889999988776654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=91.05  E-value=0.13  Score=35.97  Aligned_cols=38  Identities=21%  Similarity=0.339  Sum_probs=32.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL   41 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~   41 (230)
                      |.|-+|.++++.|.+.|...|++.+|++++.+...++.
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            45889999999999997789999999999888776654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=91.00  E-value=0.83  Score=31.94  Aligned_cols=72  Identities=11%  Similarity=0.009  Sum_probs=51.4

Q ss_pred             CCCcHHHHHHHHHHHhcCC-eEEEEecCcchhHHHHHhhh--------------ccc----CCCHHHHHHHHHHHHhhcC
Q psy7994           4 ANKGIGYGIVKGLIQQFDG-IIYLTARDASRGQEALEKLQ--------------KLD----ILDKNSIKALHDHLEAEHG   64 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~-~vi~~~r~~~~~~~~~~~~~--------------~~D----~s~~~~v~~~~~~~~~~~~   64 (230)
                      |.|-||.++++.|.+.|.. .|+..+++++.++...+.-.              .+|    .+-++++..+++++.....
T Consensus         8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~vl~~l~~~~~   87 (171)
T d2g5ca2           8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILS   87 (171)
T ss_dssp             SCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHHHHHHHSC
T ss_pred             ccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCchhhhhhhhhhhcccc
Confidence            4689999999999998653 78888999887776654311              133    2456778888888877766


Q ss_pred             CCcEEEEccCC
Q psy7994          65 GVDVLVNNAAI   75 (230)
Q Consensus        65 ~id~lv~~ag~   75 (230)
                      .=.+++..++.
T Consensus        88 ~~~ii~d~~s~   98 (171)
T d2g5ca2          88 EDATVTDQGSV   98 (171)
T ss_dssp             TTCEEEECCSC
T ss_pred             ccccccccccc
Confidence            55666666654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.97  E-value=1.2  Score=34.92  Aligned_cols=108  Identities=13%  Similarity=0.010  Sum_probs=64.4

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCC-----CHHHHHHHHHHHHhhcCCCcEEEEccCCcc
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDIL-----DKNSIKALHDHLEAEHGGVDVLVNNAAIAF   77 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s-----~~~~v~~~~~~~~~~~~~id~lv~~ag~~~   77 (230)
                      .|+|+++.++    +..|...|+.++.++..++...+.+....+.     -..++......+.....+.|+||.+.-...
T Consensus       154 ~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~Vi~DpP~~~  229 (324)
T d2as0a2         154 TYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFV  229 (324)
T ss_dssp             CTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSC
T ss_pred             Ccccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCchhcCCcccc
Confidence            3556665544    4556678999999998877766555431111     112344455555555568999998876532


Q ss_pred             ccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          78 KVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                            .........    ......+.+.++++++++|.+++.+-..
T Consensus       230 ------~~~~~~~~~----~~~y~~l~~~a~~ll~pGG~lv~~s~s~  266 (324)
T d2as0a2         230 ------QHEKDLKAG----LRAYFNVNFAGLNLVKDGGILVTCSCSQ  266 (324)
T ss_dssp             ------SSGGGHHHH----HHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred             ------CCHHHHHHH----HHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence                  112222222    2234557778888899999887766433

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=90.79  E-value=0.42  Score=34.15  Aligned_cols=94  Identities=16%  Similarity=0.103  Sum_probs=65.4

Q ss_pred             CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---ccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCC
Q psy7994           6 KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSS   82 (230)
Q Consensus         6 ~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~   82 (230)
                      |=.|.+-++..... +..|.+.+.+.++++.....+..   .-.++.+.+++.+.       .-|+||.++=+....   
T Consensus        41 GvaG~~A~~~A~~l-GA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-------~aDivI~aalipG~~---  109 (168)
T d1pjca1          41 GVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA-------EADLLIGAVLVPGRR---  109 (168)
T ss_dssp             SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH-------TCSEEEECCCCTTSS---
T ss_pred             ChHHHHHHHHHhhC-CCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhc-------cCcEEEEeeecCCcc---
Confidence            44577777777777 67899999998888776665543   44456666666555       679999888764321   


Q ss_pred             CCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCCcc
Q psy7994          83 EPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSCGH  126 (230)
Q Consensus        83 ~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~~~  126 (230)
                                      .+.++++..+..|+++.-||=++-..|-
T Consensus       110 ----------------aP~lIt~~mv~~Mk~GSVIVDvaidqGG  137 (168)
T d1pjca1         110 ----------------APILVPASLVEQMRTGSVIVDVAVDQGG  137 (168)
T ss_dssp             ----------------CCCCBCHHHHTTSCTTCEEEETTCTTCC
T ss_pred             ----------------cCeeecHHHHhhcCCCcEEEEeecCCCC
Confidence                            2334456667788888888888876663

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.34  E-value=0.24  Score=32.86  Aligned_cols=61  Identities=10%  Similarity=0.137  Sum_probs=44.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcc-hhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEE
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDAS-RGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLV   70 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~-~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv   70 (230)
                      |+|-+|+.++....+. +..+++.+.+++ .......+....|..|.+.+.+++.+.     ++|++-
T Consensus        18 GgGQL~rMla~aA~~l-G~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~~-----~~DviT   79 (111)
T d1kjqa2          18 GSGELGKEVAIECQRL-GVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELE-----KPHYIV   79 (111)
T ss_dssp             SCSHHHHHHHHHHHTT-TCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             eCCHHHHHHHHHHHHC-CCEEEEEcCCCCCchhhcCCeEEECCCCCHHHHHHHHHhh-----CCceEE
Confidence            4678999999998888 556666666554 344444455558999999999988754     688875

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.49  E-value=0.19  Score=36.78  Aligned_cols=38  Identities=11%  Similarity=0.113  Sum_probs=31.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ   42 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~   42 (230)
                      |+|-+|..+|..++.. +..|++.+++++.++...+.+.
T Consensus        11 GaG~mG~~iA~~~a~~-G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2          11 GGGLMGAGIAQVAAAT-GHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHhC-CCcEEEEECChHHHHHHHhhHH
Confidence            3478999999999998 6799999999988777665554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=89.37  E-value=0.91  Score=32.65  Aligned_cols=70  Identities=14%  Similarity=0.194  Sum_probs=44.6

Q ss_pred             CCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc-------ccCCCHHHHHHHHHHHHh-----hcCCCcEEEEc
Q psy7994           5 NKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------LDILDKNSIKALHDHLEA-----EHGGVDVLVNN   72 (230)
Q Consensus         5 s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~-------~D~s~~~~v~~~~~~~~~-----~~~~id~lv~~   72 (230)
                      +|-||..+|..|+.. +..|++.+++++.++...+.+..       -....++.....+..+.-     .....|+||-+
T Consensus        12 aG~mG~~iA~~~a~~-G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~adlViEa   90 (186)
T d1wdka3          12 AGIMGGGIAYQSASK-GTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEA   90 (186)
T ss_dssp             CHHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGCSEEEEC
T ss_pred             cCHHHHHHHHHHHhC-CCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeecccccccccccceeeee
Confidence            478999999999999 67899999998877766554432       223345555555554321     12245666665


Q ss_pred             cCC
Q psy7994          73 AAI   75 (230)
Q Consensus        73 ag~   75 (230)
                      ...
T Consensus        91 v~E   93 (186)
T d1wdka3          91 VVE   93 (186)
T ss_dssp             CCS
T ss_pred             ecc
Confidence            543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=89.14  E-value=0.88  Score=33.22  Aligned_cols=84  Identities=15%  Similarity=0.012  Sum_probs=50.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |-|.||+.+++.|... +.+|+..++........       +....+++++++.       .-|+|+.+.-.... +..-
T Consensus        50 G~G~IG~~va~~l~~f-g~~V~~~d~~~~~~~~~-------~~~~~~~l~~~l~-------~sDii~~~~plt~~-T~~l  113 (197)
T d1j4aa1          50 GTGHIGQVFMQIMEGF-GAKVITYDIFRNPELEK-------KGYYVDSLDDLYK-------QADVISLHVPDVPA-NVHM  113 (197)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHH-------TTCBCSCHHHHHH-------HCSEEEECSCCCGG-GTTC
T ss_pred             cccccchhHHHhHhhh-cccccccCccccccccc-------ceeeecccccccc-------ccccccccCCcccc-cccc
Confidence            5689999999999887 56777777765432211       1112334555655       47998887765321 1111


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      .+                   +..+..|+++..+||+|=
T Consensus       114 i~-------------------~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         114 IN-------------------DESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             BS-------------------HHHHHHSCTTEEEEECSC
T ss_pred             cc-------------------HHHHhhhCCccEEEecCc
Confidence            11                   223345678888888874

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.01  E-value=0.72  Score=35.88  Aligned_cols=26  Identities=12%  Similarity=0.203  Sum_probs=19.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEec
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTAR   29 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r   29 (230)
                      .||..|.++|+.|..+|+.++++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            46889999999999996555555433

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.84  E-value=0.37  Score=33.59  Aligned_cols=59  Identities=24%  Similarity=0.278  Sum_probs=42.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      |+|-+|.++++.|.+. ++.+++..|+.++.++..+++.- -..  .+.+++++       .-|++|.+.
T Consensus         7 G~G~mG~al~~~l~~~-~~~i~v~~r~~~~~~~l~~~~g~-~~~--~~~~~~~~-------~~dvIilav   65 (152)
T d2ahra2           7 GVGKMASAIIKGLKQT-PHELIISGSSLERSKEIAEQLAL-PYA--MSHQDLID-------QVDLVILGI   65 (152)
T ss_dssp             CCSHHHHHHHHHHTTS-SCEEEEECSSHHHHHHHHHHHTC-CBC--SSHHHHHH-------TCSEEEECS
T ss_pred             eccHHHHHHHHHHHhC-CCeEEEEcChHHhHHhhccccce-eee--chhhhhhh-------ccceeeeec
Confidence            6788999999999988 67889999998888877665432 222  13334444       578888775

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=88.79  E-value=0.53  Score=32.57  Aligned_cols=64  Identities=11%  Similarity=0.040  Sum_probs=44.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhh-------cccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~-------~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      |.+-+|..+++.|.++ +..++++..++++.....+...       ..|.++++.++++-      ..+.|.+|.+.+
T Consensus        10 G~g~~g~~l~~~L~~~-~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~------i~~a~~vi~~~~   80 (153)
T d1id1a_          10 GHSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAG------IDRCRAILALSD   80 (153)
T ss_dssp             CCSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHT------TTTCSEEEECSS
T ss_pred             CCCHHHHHHHHHHHHc-CCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhc------cccCCEEEEccc
Confidence            4478999999999999 5567777777765554444332       27999988766552      236778876654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.72  E-value=0.66  Score=33.44  Aligned_cols=86  Identities=10%  Similarity=0.026  Sum_probs=53.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |.|.||+++++.+... +..|+..++...+.......+   .   ..++++++.       .-|+|+.+.-.... +.. 
T Consensus        51 G~G~IG~~va~~~~~f-g~~v~~~d~~~~~~~~~~~~~---~---~~~l~ell~-------~sDiv~~~~Plt~~-T~~-  114 (184)
T d1ygya1          51 GLGRIGQLVAQRIAAF-GAYVVAYDPYVSPARAAQLGI---E---LLSLDDLLA-------RADFISVHLPKTPE-TAG-  114 (184)
T ss_dssp             CCSHHHHHHHHHHHTT-TCEEEEECTTSCHHHHHHHTC---E---ECCHHHHHH-------HCSEEEECCCCSTT-TTT-
T ss_pred             cccchhHHHHHHhhhc-cceEEeecCCCChhHHhhcCc---e---eccHHHHHh-------hCCEEEEcCCCCch-hhh-
Confidence            5789999999988877 668888887765444332222   1   223455555       47898877765421 100 


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                        .+-+..+..|+++..+||+|=.
T Consensus       115 ------------------lin~~~l~~mk~~a~lIN~sRG  136 (184)
T d1ygya1         115 ------------------LIDKEALAKTKPGVIIVNAARG  136 (184)
T ss_dssp             ------------------CBCHHHHTTSCTTEEEEECSCT
T ss_pred             ------------------hhhHHHHhhhCCCceEEEecch
Confidence                              1123445677888899999853

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=88.05  E-value=0.62  Score=33.97  Aligned_cols=87  Identities=13%  Similarity=0.066  Sum_probs=54.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |-|.||+.+++.+... +..|+..++..........     .+...+++++++.       .-|+|+.+...... +.. 
T Consensus        56 G~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~-----~~~~~~~l~~ll~-------~sD~i~~~~plt~~-T~~-  120 (193)
T d1mx3a1          56 GLGRVGQAVALRAKAF-GFNVLFYDPYLSDGVERAL-----GLQRVSTLQDLLF-------HSDCVTLHCGLNEH-NHH-  120 (193)
T ss_dssp             CCSHHHHHHHHHHHTT-TCEEEEECTTSCTTHHHHH-----TCEECSSHHHHHH-------HCSEEEECCCCCTT-CTT-
T ss_pred             ccccccccceeeeecc-ccceeeccCcccccchhhh-----ccccccchhhccc-------cCCEEEEeeccccc-chh-
Confidence            5688999999999887 6677777776543322211     2333445666665       46888777765321 100 


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                        .+-+.++..|+++..+||+|-.
T Consensus       121 ------------------li~~~~l~~mk~~a~lIN~sRG  142 (193)
T d1mx3a1         121 ------------------LINDFTVKQMRQGAFLVNTARG  142 (193)
T ss_dssp             ------------------SBSHHHHTTSCTTEEEEECSCT
T ss_pred             ------------------hhhHHHHhccCCCCeEEecCCc
Confidence                              1223445677888999999853

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.74  E-value=1.3  Score=31.47  Aligned_cols=28  Identities=7%  Similarity=0.170  Sum_probs=23.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDAS   32 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~   32 (230)
                      |+|..|.++|..|++. ++.|.+.+|..+
T Consensus         7 GaG~~GtalA~~la~~-g~~V~l~~r~~~   34 (180)
T d1txga2           7 GAGAMGSALSVPLVDN-GNEVRIWGTEFD   34 (180)
T ss_dssp             SCCHHHHHHHHHHHHH-CCEEEEECCGGG
T ss_pred             CCCHHHHHHHHHHHHC-CCEEEEEEeccc
Confidence            5689999999999998 678888888543

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.17  E-value=0.8  Score=33.29  Aligned_cols=106  Identities=19%  Similarity=0.087  Sum_probs=63.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc------ccCCCHHHHHHHHHHHHhhcCCCcEEEEccC
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKALHDHLEAEHGGVDVLVNNAA   74 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~------~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag   74 (230)
                      +|-|+||...++...+ .  ...|+..++++..++...+.+..      +--.+..++..++....  .+++|.++...|
T Consensus        30 ~t~G~Gghs~~il~~~-~--~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~--~~~vdgIl~DlG  104 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P--GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLG--IEKVDGILMDLG  104 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T--TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTT--CSCEEEEEEECS
T ss_pred             ecCCCcHHHHHHHhcC-C--CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcC--CCCcceeeeccc
Confidence            4678888888887765 3  35799999999988877766554      11123344444444321  358999999999


Q ss_pred             CccccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          75 IAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      ++...      .+..++-|...    -.........++++|+++.++
T Consensus       105 vSs~Q------ld~~~r~~~~~----~~~L~~a~~~Lk~gG~l~ii~  141 (192)
T d1m6ya2         105 VSTYQ------LKGENRELENL----KEFLKKAEDLLNPGGRIVVIS  141 (192)
T ss_dssp             CCHHH------HHTSHTHHHHH----HHHHHHGGGGEEEEEEEEEEE
T ss_pred             hhHhh------hhhhhccchhH----HHHHHHHHHhcCCCCeeeeec
Confidence            85321      11112222221    122344445667788888776

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=86.72  E-value=0.79  Score=33.06  Aligned_cols=88  Identities=18%  Similarity=0.188  Sum_probs=53.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |.|.||+++++.|... +..|+..++..........    ..+....+++++++       .-|+|+.+...... +.. 
T Consensus        51 G~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~----~~~~~~~~l~~~l~-------~sD~v~~~~plt~~-T~~-  116 (188)
T d2naca1          51 AAGRIGLAVLRRLAPF-DVHLHYTDRHRLPESVEKE----LNLTWHATREDMYP-------VCDVVTLNCPLHPE-TEH-  116 (188)
T ss_dssp             CCSHHHHHHHHHHGGG-TCEEEEECSSCCCHHHHHH----HTCEECSSHHHHGG-------GCSEEEECSCCCTT-TTT-
T ss_pred             cccccchhhhhhhhcc-CceEEEEeecccccccccc----ccccccCCHHHHHH-------hccchhhccccccc-chh-
Confidence            5688999999999887 6688888876543332211    12223334444443       68998877765321 111 


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSS  123 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~  123 (230)
                                        .+.+.++..|+++..+||+|-.
T Consensus       117 ------------------li~~~~l~~mk~ga~lIN~aRG  138 (188)
T d2naca1         117 ------------------MINDETLKLFKRGAYIVNTARG  138 (188)
T ss_dssp             ------------------CBSHHHHTTSCTTEEEEECSCG
T ss_pred             ------------------hhHHHHHHhCCCCCEEEecCch
Confidence                              1223445677888889998853

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.67  E-value=2.3  Score=30.67  Aligned_cols=35  Identities=6%  Similarity=-0.140  Sum_probs=28.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHH
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE   39 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~   39 (230)
                      |.|-+|..+|..|++. ++.|+..+.++++.+...+
T Consensus         7 GlG~vGl~~a~~la~~-g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSAR-GHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             CCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHT
T ss_pred             CCCHhHHHHHHHHHhC-CCcEEEEeCCHHHHHHhcc
Confidence            6789999999999999 6788899988877665543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=86.14  E-value=1.1  Score=32.36  Aligned_cols=87  Identities=15%  Similarity=0.023  Sum_probs=53.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |-|.||+.+++.+... +..|+..++...........    .....+++++++.       .-|+|+.+...... +.. 
T Consensus        54 G~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~~----~~~~~~~l~~ll~-------~sD~v~l~~plt~~-T~~-  119 (191)
T d1gdha1          54 GFGSIGQALAKRAQGF-DMDIDYFDTHRASSSDEASY----QATFHDSLDSLLS-------VSQFFSLNAPSTPE-TRY-  119 (191)
T ss_dssp             CCSHHHHHHHHHHHTT-TCEEEEECSSCCCHHHHHHH----TCEECSSHHHHHH-------HCSEEEECCCCCTT-TTT-
T ss_pred             ecccchHHHHHHHHhh-ccccccccccccccchhhcc----cccccCCHHHHHh-------hCCeEEecCCCCch-Hhh-
Confidence            4589999999988887 66777777755433322211    2223345666666       46898877765421 101 


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                                        .+-+.++..|+++..+||+|=
T Consensus       120 ------------------li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         120 ------------------FFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             ------------------CBSHHHHTTSCTTEEEEECSC
T ss_pred             ------------------eecHHHhhCcCCccEEEecCC
Confidence                              111334556788889999974

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.05  E-value=1.6  Score=30.05  Aligned_cols=70  Identities=10%  Similarity=0.055  Sum_probs=46.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc---------------ccCCCHHHHHHHHHHHHhhcCCCcE
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------------LDILDKNSIKALHDHLEAEHGGVDV   68 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~---------------~D~s~~~~v~~~~~~~~~~~~~id~   68 (230)
                      |-|-+|..++++|++. ++. +...|+.++.....+....               ..+.+.+.+......+.+...+-.+
T Consensus         7 GlG~MG~~ma~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~~~~~   84 (156)
T d2cvza2           7 GLGAMGYPMAGHLARR-FPT-LVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLREGTY   84 (156)
T ss_dssp             CCSTTHHHHHHHHHTT-SCE-EEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEE
T ss_pred             eHHHHHHHHHHHHHhC-CCE-EEEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccccccc
Confidence            3478999999999987 444 4567777766655444321               3456677788777777666555566


Q ss_pred             EEEccCC
Q psy7994          69 LVNNAAI   75 (230)
Q Consensus        69 lv~~ag~   75 (230)
                      +|.+.-.
T Consensus        85 iid~sT~   91 (156)
T d2cvza2          85 WVDATSG   91 (156)
T ss_dssp             EEECSCC
T ss_pred             ccccccC
Confidence            6655543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=84.98  E-value=1.4  Score=34.53  Aligned_cols=104  Identities=17%  Similarity=0.076  Sum_probs=60.5

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCC----HHHHHHHHHHHHhhcCCCcEEEEccCCccc
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILD----KNSIKALHDHLEAEHGGVDVLVNNAAIAFK   78 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~----~~~v~~~~~~~~~~~~~id~lv~~ag~~~~   78 (230)
                      -|+|+++.++    +. |+..|+.++.++..++.+.+.+....+.+    ..++..+.+.+...-.+.|+||.+.-....
T Consensus       154 ~gtG~~s~~~----a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~DpP~~~~  228 (318)
T d1wxxa2         154 SYAGGFALHL----AL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAK  228 (318)
T ss_dssp             CTTTHHHHHH----HH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCC
T ss_pred             CCCcHHHHHH----Hh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEEcCCcccc
Confidence            3556665443    33 46789999999988877766554322211    123344445555555689999988754321


Q ss_pred             cCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          79 VNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        79 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      .      .......    ......+.+.++++++++|.+++.|
T Consensus       229 ~------~~~~~~~----~~~~~~l~~~a~~lLkpGG~Lv~~s  261 (318)
T d1wxxa2         229 G------KKDVERA----YRAYKEVNLRAIKLLKEGGILATAS  261 (318)
T ss_dssp             S------TTSHHHH----HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             c------hHHHHHH----HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            1      1111111    1223457777778889999877654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=84.85  E-value=0.58  Score=33.54  Aligned_cols=86  Identities=14%  Similarity=0.134  Sum_probs=49.6

Q ss_pred             HHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCH-HHHHHHHHHHHhhcCCCcEEEEccCCccccCCCCCChhHHHH
Q psy7994          13 VKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDK-NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH   91 (230)
Q Consensus        13 a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~-~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~   91 (230)
                      +..|++. +..|+.++.+++.++.+.+.+....+++. +-+..-+.++.......|.++.+.+..        .   +  
T Consensus        48 s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D~v~~~~~~~--------~---~--  113 (186)
T d1l3ia_          48 TLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSGG--------E---L--  113 (186)
T ss_dssp             HHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCTT--------C---H--
T ss_pred             ccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcCEEEEeCccc--------c---c--
Confidence            4456666 56899999999988877776655333211 111111222223345789888664331        1   1  


Q ss_pred             HHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          92 TMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        92 ~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                               ..+.+.+...++++|+++...
T Consensus       114 ---------~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_         114 ---------QEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             ---------HHHHHHHHHTEEEEEEEEEEE
T ss_pred             ---------hHHHHHHHHHhCcCCEEEEEe
Confidence                     124555666778889887653

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=84.56  E-value=1.6  Score=31.18  Aligned_cols=81  Identities=16%  Similarity=0.033  Sum_probs=50.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |-|.||+.+++.+... +..|+..++++....          ..-.+++++++       ..-|+|+.+.-... .+..-
T Consensus        49 G~G~IG~~va~~l~~~-g~~v~~~d~~~~~~~----------~~~~~~l~ell-------~~sDiv~~~~pl~~-~t~~l  109 (181)
T d1qp8a1          49 GLGEIGTRVGKILAAL-GAQVRGFSRTPKEGP----------WRFTNSLEEAL-------REARAAVCALPLNK-HTRGL  109 (181)
T ss_dssp             SCSTHHHHHHHHHHHT-TCEEEEECSSCCCSS----------SCCBSCSHHHH-------TTCSEEEECCCCST-TTTTC
T ss_pred             ccccccccceeeeecc-ccccccccccccccc----------eeeeechhhhh-------hccchhhccccccc-ccccc
Confidence            4577999999999988 568888888764321          11122344444       37899988776532 11111


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      .+                   +..+..|+++..+|++|-
T Consensus       110 i~-------------------~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         110 VK-------------------YQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             BC-------------------HHHHTTSCTTCEEEECSC
T ss_pred             cc-------------------cceeeeccccceEEeccc
Confidence            11                   344566788889999874

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=84.16  E-value=1.1  Score=33.58  Aligned_cols=69  Identities=14%  Similarity=0.092  Sum_probs=45.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhh--hcccCCCHHHHHHHHHHHHhhcCCCcEEEEcc
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL--QKLDILDKNSIKALHDHLEAEHGGVDVLVNNA   73 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~--~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~a   73 (230)
                      |.||+|..++..|+..|-..+.+++.+.-...+....+  ..-|+-.+ -++.+.+++.+..+.+.+..+..
T Consensus        37 G~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~-K~~~a~~~l~~~np~~~i~~~~~  107 (247)
T d1jw9b_          37 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQP-KVESARDALTRINPHIAITPVNA  107 (247)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSB-HHHHHHHHHHHHCTTSEEEEECS
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCch-HHHHHHHHHHHhhcccchhhhhh
Confidence            57999999999999999999999987765444443332  11344433 35666666666666666554433

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.19  E-value=1.4  Score=31.64  Aligned_cols=85  Identities=11%  Similarity=0.031  Sum_probs=52.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |-|.||+.+++.+... +..|+..++.......        .....+++++++.       .-|+|+.++..... +.. 
T Consensus        51 G~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~--------~~~~~~~l~ell~-------~sDii~i~~plt~~-T~~-  112 (188)
T d1sc6a1          51 GYGHIGTQLGILAESL-GMYVYFYDIENKLPLG--------NATQVQHLSDLLN-------MSDVVSLHVPENPS-TKN-  112 (188)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSSCCCCCT--------TCEECSCHHHHHH-------HCSEEEECCCSSTT-TTT-
T ss_pred             ecccchhhhhhhcccc-cceEeeccccccchhh--------hhhhhhhHHHHHh-------hccceeecccCCcc-hhh-
Confidence            5689999999988777 6678888775432211        1112234555655       46898887776421 111 


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecCCC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSSSC  124 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS~~  124 (230)
                                        .+.+.++..|+++..+||+|-..
T Consensus       113 ------------------li~~~~l~~mk~~a~lIN~aRG~  135 (188)
T d1sc6a1         113 ------------------MMGAKEISLMKPGSLLINASRGT  135 (188)
T ss_dssp             ------------------CBCHHHHHHSCTTEEEEECSCSS
T ss_pred             ------------------hccHHHHhhCCCCCEEEEcCcHH
Confidence                              12234455678888999998543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=83.16  E-value=1.3  Score=32.18  Aligned_cols=83  Identities=17%  Similarity=0.152  Sum_probs=50.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCccccCCCC
Q psy7994           4 ANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSE   83 (230)
Q Consensus         4 ~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~   83 (230)
                      |.|.||+.+++.|... +.+|+..++.......     ...+   ..+++.++.       ..|+++.+.-.... +..-
T Consensus        52 G~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~-----~~~~---~~~l~~l~~-------~~D~v~~~~plt~~-T~~l  114 (199)
T d1dxya1          52 GTGHIGQVAIKLFKGF-GAKVIAYDPYPMKGDH-----PDFD---YVSLEDLFK-------QSDVIDLHVPGIEQ-NTHI  114 (199)
T ss_dssp             CCSHHHHHHHHHHHHT-TCEEEEECSSCCSSCC-----TTCE---ECCHHHHHH-------HCSEEEECCCCCGG-GTTS
T ss_pred             eccccccccccccccc-ceeeeccCCccchhhh-----cchh---HHHHHHHHH-------hcccceeeeccccc-cccc
Confidence            5688999999999887 6678888776543210     0122   234555555       46888776655321 1111


Q ss_pred             CChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEecC
Q psy7994          84 PFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVSS  122 (230)
Q Consensus        84 ~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~sS  122 (230)
                      .                   -+.++..|+++..+||+|=
T Consensus       115 i-------------------~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         115 I-------------------NEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             B-------------------CHHHHHHSCTTEEEEECSC
T ss_pred             c-------------------cHHHhhccCCceEEEeccc
Confidence            1                   1234456788888999884

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=82.34  E-value=0.51  Score=34.04  Aligned_cols=29  Identities=28%  Similarity=0.155  Sum_probs=23.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEEEEec
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIYLTAR   29 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi~~~r   29 (230)
                      |.||||..|.++.+.|.+|-...+.....
T Consensus        10 IlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1          10 VLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             EESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             EECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            57999999999999999986556655543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=82.19  E-value=4.3  Score=31.58  Aligned_cols=105  Identities=7%  Similarity=0.025  Sum_probs=60.1

Q ss_pred             CCCCcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhc--ccCCC----HHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           3 GANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--LDILD----KNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         3 G~s~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~--~D~s~----~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      .++||++.+    .+..|...|+.++.++..++...+.+..  .|...    ..++...++...+...+.|+||...-..
T Consensus       153 ~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         153 SYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSF  228 (317)
T ss_dssp             CTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred             CCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcCCCCEEEEcChhh
Confidence            456666644    3345566899999998877766555432  33221    2344555666656656899999886533


Q ss_pred             cccCCCCCChhHHHHHHHHhhhhHHHHHHHhcccccCCceEEEec
Q psy7994          77 FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNVS  121 (230)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~g~ii~~s  121 (230)
                      ....      +.....    ......+.+.++++++++|.+++.|
T Consensus       229 ~~~~------~~~~~~----~~~~~~L~~~a~~ll~pgG~l~~~s  263 (317)
T d2b78a2         229 ARNK------KEVFSV----SKDYHKLIRQGLEILSENGLIIAST  263 (317)
T ss_dssp             -----------CCCCH----HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccch------hHHHHH----HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            2111      111111    1133456777888888888777644

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=80.55  E-value=1  Score=28.29  Aligned_cols=62  Identities=16%  Similarity=0.088  Sum_probs=33.6

Q ss_pred             CcHHHHHHHHHHHhcCCeEEEEecCcchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCCcEEEEccCCc
Q psy7994           6 KGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA   76 (230)
Q Consensus         6 ~giG~~~a~~la~~g~~~vi~~~r~~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~~~id~lv~~ag~~   76 (230)
                      |.-|.++++.|.++|....+...+..............+.....+  ...+       ..+|.+|.+.|+.
T Consensus        14 G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~d~vi~SPGi~   75 (93)
T d2jfga1          14 GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN--DEWL-------MAADLIVASPGIA   75 (93)
T ss_dssp             SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC--HHHH-------HHCSEEEECTTSC
T ss_pred             CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc--hhhh-------ccCCEEEECCCCC
Confidence            667999999999995544444444333322221111112222111  1112       2589999999985

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=80.47  E-value=0.66  Score=32.82  Aligned_cols=73  Identities=11%  Similarity=0.203  Sum_probs=48.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCeEE-EEecCcch-hH-H----------------HHHhh-hc----ccCCCHHHHHHHH
Q psy7994           1 VTGANKGIGYGIVKGLIQQFDGIIY-LTARDASR-GQ-E----------------ALEKL-QK----LDILDKNSIKALH   56 (230)
Q Consensus         1 ItG~s~giG~~~a~~la~~g~~~vi-~~~r~~~~-~~-~----------------~~~~~-~~----~D~s~~~~v~~~~   56 (230)
                      |.|++|-+|+++++.+.+.....++ ..+|.... .. .                ..+.+ ..    +|+|.++.....+
T Consensus         9 i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p~~~~~~~   88 (162)
T d1diha1           9 IAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHL   88 (162)
T ss_dssp             ETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEeccHHHHHHHH
Confidence            5799999999999999887444432 23332211 00 0                00011 11    7999999999999


Q ss_pred             HHHHhhcCCCcEEEEccCC
Q psy7994          57 DHLEAEHGGVDVLVNNAAI   75 (230)
Q Consensus        57 ~~~~~~~~~id~lv~~ag~   75 (230)
                      +.+.+.  ++-+|+=..|+
T Consensus        89 ~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          89 AFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHT--TCEEEECCCCC
T ss_pred             HHHHhc--cceeEEecCCC
Confidence            887765  78888877776