Psyllid ID: psy8096

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
MEEDCSVSVTLMAVIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRCTNN
cccccEEEEEccEEEcHHHHHHHHHHHHHccccEEEEEEccccEEEccccccEEcccccccccccEEEEEEEccccEEEEEEcccccccccEEEEccccccccccEEEEccccccccc
cccccEEEEEHHHHHHHHHHHHHHHHHHccccEEEEEEEccccEEEcccccccHEEEccccccccEEEEEEEcccEEEEEEEEEEcccccEEEEEccccccccccccccccccccccc
MEEDCSVSVTLMAVIRASVSdkrekqymdkgigcymfkiddRFVIDATMKGNAARfinhscdpncySRVVEIMGKPHIIIFALRKInkgeeltydykfpieddnkischclamrctnn
meedcsvsvTLMAVIrasvsdkrekqymdKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRCTNN
MEEDCSVSVTLMAVIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRCTNN
******VSVTLMAVIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRC***
**EDCSVSVTLMAVIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRCT**
********VTLMAVIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRCTNN
***DCSVSVTLMAVIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAM*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEEDCSVSVTLMAVIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRCTNN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query118 2.2.26 [Sep-21-2011]
Q247423828 Histone-lysine N-methyltr N/A N/A 0.855 0.026 0.696 5e-41
P552003966 Histone-lysine N-methyltr yes N/A 0.864 0.025 0.708 1e-40
Q031643969 Histone-lysine N-methyltr yes N/A 0.864 0.025 0.708 1e-40
P206593726 Histone-lysine N-methyltr yes N/A 0.855 0.027 0.686 2e-40
O085502713 Histone-lysine N-methyltr no N/A 0.864 0.037 0.689 7e-40
Q9UMN62715 Histone-lysine N-methyltr no N/A 0.864 0.037 0.689 7e-40
Q54HS31486 Histone-lysine N-methyltr yes N/A 0.855 0.067 0.601 2e-29
Q8IRW82431 Histone-lysine N-methyltr no N/A 0.864 0.041 0.572 9e-29
Q1LY771844 Histone-lysine N-methyltr no N/A 0.847 0.054 0.549 3e-28
Q9Y7R4920 Histone-lysine N-methyltr yes N/A 0.855 0.109 0.563 6e-28
>sp|Q24742|TRX_DROVI Histone-lysine N-methyltransferase trithorax OS=Drosophila virilis GN=trx PE=3 SV=1 Back     alignment and function desciption
 Score =  166 bits (419), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 71/102 (69%), Positives = 88/102 (86%), Gaps = 1/102 (0%)

Query: 14   VIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIM 73
            +IR++++DKRE+ Y  +GIGCYMFKIDD  V+DATM+GNAARFINHSC+PNCYS+VV+I+
Sbjct: 3723 LIRSTLTDKRERYYDSRGIGCYMFKIDDNLVVDATMRGNAARFINHSCEPNCYSKVVDIL 3782

Query: 74   GKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRC 115
            G  HIIIFALR+I +GEELTYDYKFP ED+ KI C C + RC
Sbjct: 3783 GHKHIIIFALRRIVQGEELTYDYKFPFEDE-KIPCSCGSKRC 3823
Histone methyltransferase. Methylates 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Functions in segment determination through interaction with genes of bithorax (BX-C) and antennapedia (ANT-C) complexes. Acts as an activator of BX-C. Involved in the very early regulation of homeotic genes expressed only in the posterior region of the embryo.
Drosophila virilis (taxid: 7244)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3
>sp|P55200|MLL1_MOUSE Histone-lysine N-methyltransferase MLL OS=Mus musculus GN=Mll PE=1 SV=3 Back     alignment and function description
>sp|Q03164|MLL1_HUMAN Histone-lysine N-methyltransferase MLL OS=Homo sapiens GN=MLL PE=1 SV=5 Back     alignment and function description
>sp|P20659|TRX_DROME Histone-lysine N-methyltransferase trithorax OS=Drosophila melanogaster GN=trx PE=1 SV=4 Back     alignment and function description
>sp|O08550|MLL4_MOUSE Histone-lysine N-methyltransferase MLL4 OS=Mus musculus GN=Wbp7 PE=1 SV=3 Back     alignment and function description
>sp|Q9UMN6|MLL4_HUMAN Histone-lysine N-methyltransferase MLL4 OS=Homo sapiens GN=WBP7 PE=1 SV=1 Back     alignment and function description
>sp|Q54HS3|SET1_DICDI Histone-lysine N-methyltransferase set1 OS=Dictyostelium discoideum GN=set1 PE=1 SV=1 Back     alignment and function description
>sp|Q8IRW8|TRR_DROME Histone-lysine N-methyltransferase trr OS=Drosophila melanogaster GN=trr PE=1 SV=2 Back     alignment and function description
>sp|Q1LY77|SE1BA_DANRE Histone-lysine N-methyltransferase SETD1B-A OS=Danio rerio GN=setd1ba PE=1 SV=2 Back     alignment and function description
>sp|Q9Y7R4|SET1_SCHPO Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query118
242005679 3311 mixed-lineage leukemia protein, mll, put 0.855 0.030 0.794 2e-42
326676474 820 PREDICTED: histone-lysine N-methyltransf 0.864 0.124 0.747 3e-41
383861703 3434 PREDICTED: uncharacterized protein LOC10 0.855 0.029 0.764 2e-40
328778088 3195 PREDICTED: histone-lysine N-methyltransf 0.855 0.031 0.764 3e-40
432880997 2812 PREDICTED: uncharacterized protein LOC10 0.864 0.036 0.718 5e-40
432909101 3692 PREDICTED: uncharacterized protein LOC10 0.864 0.027 0.718 9e-40
348533938 2924 PREDICTED: hypothetical protein LOC10070 0.864 0.034 0.718 1e-39
410905295 3463 PREDICTED: uncharacterized protein LOC10 0.864 0.029 0.718 2e-39
449267369 3786 Histone-lysine N-methyltransferase HRX, 0.864 0.026 0.708 2e-39
363742545 3871 PREDICTED: histone-lysine N-methyltransf 0.864 0.026 0.708 2e-39
>gi|242005679|ref|XP_002423690.1| mixed-lineage leukemia protein, mll, putative [Pediculus humanus corporis] gi|212506866|gb|EEB10952.1| mixed-lineage leukemia protein, mll, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  176 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 81/102 (79%), Positives = 93/102 (91%), Gaps = 1/102 (0%)

Query: 14   VIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIM 73
            VIRA++SDKREK Y +KGIGCYMF+IDD FV+DATMKGNAARFINHSC+PNCYSRVV+I+
Sbjct: 3206 VIRANLSDKREKYYTEKGIGCYMFRIDDHFVVDATMKGNAARFINHSCEPNCYSRVVDIL 3265

Query: 74   GKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRC 115
            GK HI+IFALRKIN  EELTYDYKFP ED+ KISCHCL+ +C
Sbjct: 3266 GKKHIVIFALRKINIMEELTYDYKFPFEDE-KISCHCLSKKC 3306

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|326676474|ref|XP_003200588.1| PREDICTED: histone-lysine N-methyltransferase MLL4-like [Danio rerio] Back     alignment and taxonomy information
>gi|383861703|ref|XP_003706324.1| PREDICTED: uncharacterized protein LOC100882965 [Megachile rotundata] Back     alignment and taxonomy information
>gi|328778088|ref|XP_392252.4| PREDICTED: histone-lysine N-methyltransferase trithorax [Apis mellifera] Back     alignment and taxonomy information
>gi|432880997|ref|XP_004073754.1| PREDICTED: uncharacterized protein LOC101157226 [Oryzias latipes] Back     alignment and taxonomy information
>gi|432909101|ref|XP_004078112.1| PREDICTED: uncharacterized protein LOC101174945 [Oryzias latipes] Back     alignment and taxonomy information
>gi|348533938|ref|XP_003454461.1| PREDICTED: hypothetical protein LOC100700132 [Oreochromis niloticus] Back     alignment and taxonomy information
>gi|410905295|ref|XP_003966127.1| PREDICTED: uncharacterized protein LOC101073293 [Takifugu rubripes] Back     alignment and taxonomy information
>gi|449267369|gb|EMC78314.1| Histone-lysine N-methyltransferase HRX, partial [Columba livia] Back     alignment and taxonomy information
>gi|363742545|ref|XP_417896.3| PREDICTED: histone-lysine N-methyltransferase MLL [Gallus gallus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query118
ZFIN|ZDB-GENE-060503-3762863 mll4a "myeloid/lymphoid or mix 0.864 0.035 0.747 2.6e-37
UNIPROTKB|I3L895323 MLL "Uncharacterized protein" 0.864 0.315 0.708 3.9e-37
UNIPROTKB|F1NMV5949 MLL "Uncharacterized protein" 0.864 0.107 0.708 2.2e-36
UNIPROTKB|K7EP72257 MLL4 "Protein MLL4" [Homo sapi 0.864 0.396 0.689 2.7e-36
ZFIN|ZDB-GENE-080521-13772 mll4b "myeloid/lymphoid or mix 0.864 0.027 0.718 8.6e-36
UNIPROTKB|F1NET53958 MLL "Uncharacterized protein" 0.864 0.025 0.708 1.9e-35
UNIPROTKB|F1PLU03819 MLL "Uncharacterized protein" 0.864 0.026 0.708 3.8e-35
UNIPROTKB|F1MHA13821 MLL "Uncharacterized protein" 0.864 0.026 0.708 3.8e-35
RGD|15861653859 Mll "myeloid/lymphoid or mixed 0.864 0.026 0.708 3.8e-35
MGI|MGI:969953966 Mll1 "myeloid/lymphoid or mixe 0.864 0.025 0.708 4e-35
ZFIN|ZDB-GENE-060503-376 mll4a "myeloid/lymphoid or mixed-lineage leukemia 4a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 418 (152.2 bits), Expect = 2.6e-37, P = 2.6e-37
 Identities = 77/103 (74%), Positives = 88/103 (85%)

Query:    14 VIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIM 73
             VIRA ++DKREK Y  KGIGCYMF+IDD  V+DATM GNAARFINHSCDPNCYSRV+ + 
Sbjct:  2756 VIRAVLTDKREKYYDSKGIGCYMFRIDDFDVVDATMHGNAARFINHSCDPNCYSRVINVE 2815

Query:    74 GKPHIIIFALRKINKGEELTYDYKFPIED-DNKISCHCLAMRC 115
             G+ HI+IFALRKI +GEELTYDYKFPIED DNK+ C+C A RC
Sbjct:  2816 GQKHIVIFALRKIYRGEELTYDYKFPIEDADNKLHCNCGARRC 2858
GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA
GO:0005634 "nucleus" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0003677 "DNA binding" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0016740 "transferase activity" evidence=IEA
GO:0032259 "methylation" evidence=IEA
GO:0008168 "methyltransferase activity" evidence=IEA
UNIPROTKB|I3L895 MLL "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NMV5 MLL "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|K7EP72 MLL4 "Protein MLL4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080521-1 mll4b "myeloid/lymphoid or mixed-lineage leukemia 4b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NET5 MLL "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PLU0 MLL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MHA1 MLL "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1586165 Mll "myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:96995 Mll1 "myeloid/lymphoid or mixed-lineage leukemia 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q54HS3SET1_DICDI2, ., 1, ., 1, ., 4, 30.60190.85590.0679yesN/A
Q4WNH8SET1_ASPFU2, ., 1, ., 1, ., 4, 30.50960.85590.0813yesN/A
Q9Y7R4SET1_SCHPO2, ., 1, ., 1, ., 4, 30.56310.85590.1097yesN/A
P55200MLL1_MOUSE2, ., 1, ., 1, ., 4, 30.70870.86440.0257yesN/A
Q2UMH3SET1_ASPOR2, ., 1, ., 1, ., 4, 30.50960.85590.0821yesN/A
P20659TRX_DROME2, ., 1, ., 1, ., 4, 30.68620.85590.0271yesN/A
Q03164MLL1_HUMAN2, ., 1, ., 1, ., 4, 30.70870.86440.0256yesN/A
Q18221SET2_CAEEL2, ., 1, ., 1, ., 4, 30.58250.85590.0670yesN/A
P38827SET1_YEAST2, ., 1, ., 1, ., 4, 30.50960.85590.0935yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.1.430.737
3rd Layer2.1.10.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query118
smart00317124 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest 3e-31
pfam00856113 pfam00856, SET, SET domain 1e-25
COG2940480 COG2940, COG2940, Proteins containing SET domain [ 9e-18
>gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information 
 Score =  107 bits (268), Expect = 3e-31
 Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 14  VIRASVSDKREKQYMDKGI-GCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEI 72
           +I +  +++R K Y   G    Y+F ID    IDA  KGN ARFINHSC+PNC    VE+
Sbjct: 34  IITSEEAEERPKAYDTDGAKAFYLFDIDSDLCIDARRKGNLARFINHSCEPNCELLFVEV 93

Query: 73  MGKPHIIIFALRKINKGEELTYDYKFPIEDD 103
            G   I+IFALR I  GEELT DY     ++
Sbjct: 94  NGDDRIVIFALRDIKPGEELTIDYGSDYANE 124

Putative methyl transferase, based on outlier plant homologues. Length = 124
>gnl|CDD|216155 pfam00856, SET, SET domain Back     alignment and domain information
>gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 118
KOG4442|consensus 729 100.0
KOG1080|consensus1005 100.0
smart00317116 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) 99.95
KOG1079|consensus739 99.94
KOG1082|consensus364 99.94
KOG1083|consensus1306 99.9
KOG1085|consensus392 99.89
KOG1141|consensus1262 99.79
COG2940480 Proteins containing SET domain [General function p 99.78
KOG2589|consensus 453 99.68
PF00856162 SET: SET domain; InterPro: IPR001214 The SET domai 99.67
KOG1081|consensus463 99.37
KOG2461|consensus 396 98.28
smart0050826 PostSET Cysteine-rich motif following a subset of 97.17
KOG2084|consensus 482 97.15
KOG1337|consensus 472 96.19
PF0866663 SAF: SAF domain; InterPro: IPR013974 This entry in 91.05
KOG1338|consensus 466 89.95
PF00856 162 SET: SET domain; InterPro: IPR001214 The SET domai 83.18
TIGR02059101 swm_rep_I cyanobacterial long protein repeat. This 81.36
smart0085864 SAF This domain family includes a range of differe 80.72
>KOG4442|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.6e-42  Score=265.58  Aligned_cols=117  Identities=35%  Similarity=0.557  Sum_probs=113.5

Q ss_pred             CCCCCeeEEeeeEEEChhHHHHHHHHHhhcCC-eeeEEEcCCcEEEecccCCCeeeeeecCCCCCceeEEEEECCccEEE
Q psy8096           1 MEEDCSVSVTLMAVIRASVSDKREKQYMDKGI-GCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHII   79 (118)
Q Consensus         1 I~~g~~i~ey~Gevi~~~~~~~~~~~~~~~~~-~~y~~~~~~~~~iDa~~~gn~~RfiNHSC~PN~~~~~~~~~~~~~~~   79 (118)
                      |++|+||+||.||||+..++++|...|..... |.|+|.+....+|||+..||++|||||||+|||+++.|.|.+..||+
T Consensus       140 I~~g~FI~EY~GEVI~~~Ef~kR~~~Y~~d~~kh~Yfm~L~~~e~IDAT~KGnlaRFiNHSC~PNa~~~KWtV~~~lRvG  219 (729)
T KOG4442|consen  140 IPKGQFILEYIGEVIEEKEFEKRVKRYAKDGIKHYYFMALQGGEYIDATKKGNLARFINHSCDPNAEVQKWTVPDELRVG  219 (729)
T ss_pred             cCCCcEEeeeccccccHHHHHHHHHHHHhcCCceEEEEEecCCceecccccCcHHHhhcCCCCCCceeeeeeeCCeeEEE
Confidence            89999999999999999999999999986665 69999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCeEEEccCCCCCCCCCeEEEecCCCccC
Q psy8096          80 IFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRCTN  117 (118)
Q Consensus        80 ~~a~rdI~~GeElt~~Yg~~~~~~~~~~C~Cg~~~Cr~  117 (118)
                      |||.|+|++||||||||++++.+.....|.||+++|||
T Consensus       220 iFakk~I~~GEEITFDYqf~rYGr~AQ~CyCgeanC~G  257 (729)
T KOG4442|consen  220 IFAKKVIKPGEEITFDYQFDRYGRDAQPCYCGEANCRG  257 (729)
T ss_pred             EeEecccCCCceeeEecccccccccccccccCCccccc
Confidence            99999999999999999999999999999999999998

>KOG1080|consensus Back     alignment and domain information
>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information
>KOG1079|consensus Back     alignment and domain information
>KOG1082|consensus Back     alignment and domain information
>KOG1083|consensus Back     alignment and domain information
>KOG1085|consensus Back     alignment and domain information
>KOG1141|consensus Back     alignment and domain information
>COG2940 Proteins containing SET domain [General function prediction only] Back     alignment and domain information
>KOG2589|consensus Back     alignment and domain information
>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco Back     alignment and domain information
>KOG1081|consensus Back     alignment and domain information
>KOG2461|consensus Back     alignment and domain information
>smart00508 PostSET Cysteine-rich motif following a subset of SET domains Back     alignment and domain information
>KOG2084|consensus Back     alignment and domain information
>KOG1337|consensus Back     alignment and domain information
>PF08666 SAF: SAF domain; InterPro: IPR013974 This entry includes a range of different proteins, such as antifreeze proteins, flagellar FlgA proteins, and CpaB pilus proteins Back     alignment and domain information
>KOG1338|consensus Back     alignment and domain information
>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco Back     alignment and domain information
>TIGR02059 swm_rep_I cyanobacterial long protein repeat Back     alignment and domain information
>smart00858 SAF This domain family includes a range of different proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query118
2w5y_A192 Binary Complex Of The Mixed Lineage Leukaemia (Mll1 1e-38
3ooi_A232 Crystal Structure Of Human Histone-Lysine N-Methylt 1e-13
4fmu_A278 Crystal Structure Of Methyltransferase Domain Of Hu 3e-13
2r3a_A300 Methyltransferase Domain Of Human Suppressor Of Var 6e-13
3ope_A222 Structural Basis Of Auto-Inhibitory Mechanism Of Hi 4e-12
4ij8_A165 Crystal Structure Of The Complex Of Setd8 With Sam 5e-11
1zkk_A167 Crystal Structure Of Hset8 In Ternary Complex With 2e-10
2bqz_A161 Crystal Structure Of A Ternary Complex Of The Human 2e-10
3f9z_A166 Structural Insights Into Lysine Multiple Methylatio 3e-10
3f9w_A166 Structural Insights Into Lysine Multiple Methylatio 7e-10
2o8j_A281 Human Euchromatic Histone Methyltransferase 2 Lengt 5e-09
3k5k_A283 Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazolin 5e-09
1mvh_A299 Structure Of The Set Domain Histone Lysine Methyltr 5e-09
3hna_A287 Crystal Structure Of Catalytic Domain Of Human Euch 2e-08
2igq_A285 Human Euchromatic Histone Methyltransferase 1 Lengt 2e-08
3fpd_A261 G9a-Like Protein Lysine Methyltransferase Inhibitio 2e-08
4i51_A286 Methyltransferase Domain Of Human Euchromatic Histo 2e-07
3bo5_A290 Crystal Structure Of Methyltransferase Domain Of Hu 2e-06
1ml9_A302 Structure Of The Neurospora Set Domain Protein Dim- 5e-06
3oxg_A 464 Human Lysine Methyltransferase Smyd3 In Complex Wit 2e-04
3mek_A 429 Crystal Structure Of Human Histone-Lysine N- Methyl 2e-04
3ru0_A 438 Cocrystal Structure Of Human Smyd3 With Inhibitor S 2e-04
3qwp_A 429 Crystal Structure Of Set And Mynd Domain Containing 2e-04
3oxf_A 436 Human Lysine Methyltransferase Smyd3 In Complex Wit 2e-04
3pdn_A 428 Crystal Structure Of Smyd3 In Complex With Methyltr 2e-04
>pdb|2W5Y|A Chain A, Binary Complex Of The Mixed Lineage Leukaemia (Mll1) Set Domain With The Cofactor Product S-Adenosylhomocysteine. Length = 192 Back     alignment and structure 
Iteration: 1

 Score =  154 bits (390), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Query: 14  VIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIM 73
           VIR+  +DKREK Y  KGIGCYMF+IDD  V+DATM GNAARFINHSC+PNCYSRV+ I 
Sbjct: 85  VIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDATMHGNAARFINHSCEPNCYSRVINID 144
Query: 74  GKPHIIIFALRKINKGEELTYDYKFPIED-DNKISCHCLAMRC 115
           G+ HI+IFA+RKI +GEELTYDYKFPIED  NK+ C+C A +C
Sbjct: 145 GQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKC 187
>pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 Back     alignment and structure
>pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 Back     alignment and structure
>pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 Back     alignment and structure
>pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 Back     alignment and structure
>pdb|4IJ8|A Chain A, Crystal Structure Of The Complex Of Setd8 With Sam Length = 165 Back     alignment and structure
>pdb|1ZKK|A Chain A, Crystal Structure Of Hset8 In Ternary Complex With H4 Peptide (16-24) And Adohcy Length = 167 Back     alignment and structure
>pdb|2BQZ|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Pr-Set7 (Also Known As Set8) Length = 161 Back     alignment and structure
>pdb|3F9Z|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y245f H4-Lys20 ADOHCY Length = 166 Back     alignment and structure
>pdb|3F9W|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y334f H4-Lys20 ADOHCY Length = 166 Back     alignment and structure
>pdb|2O8J|A Chain A, Human Euchromatic Histone Methyltransferase 2 Length = 281 Back     alignment and structure
>pdb|3K5K|A Chain A, Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazoline As A Potent Inhibitor Of Histone Lysine Methyltransferase, G9a Length = 283 Back     alignment and structure
>pdb|1MVH|A Chain A, Structure Of The Set Domain Histone Lysine Methyltransferase Clr4 Length = 299 Back     alignment and structure
>pdb|3HNA|A Chain A, Crystal Structure Of Catalytic Domain Of Human Euchromatic Histone Methyltransferase 1 In Complex With Sah And Mono- Methylated H3k9 Peptide Length = 287 Back     alignment and structure
>pdb|2IGQ|A Chain A, Human Euchromatic Histone Methyltransferase 1 Length = 285 Back     alignment and structure
>pdb|3FPD|A Chain A, G9a-Like Protein Lysine Methyltransferase Inhibition By Bix- 01294 Length = 261 Back     alignment and structure
>pdb|4I51|A Chain A, Methyltransferase Domain Of Human Euchromatic Histone Methyltransferase 1, Mutant Y1211a Length = 286 Back     alignment and structure
>pdb|3BO5|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Histone-Lysine N-Methyltransferase Setmar Length = 290 Back     alignment and structure
>pdb|1ML9|A Chain A, Structure Of The Neurospora Set Domain Protein Dim-5, A Histone Lysine Methyltransferase Length = 302 Back     alignment and structure
>pdb|3OXG|A Chain A, Human Lysine Methyltransferase Smyd3 In Complex With Adohcy (Form Iii) Length = 464 Back     alignment and structure
>pdb|3MEK|A Chain A, Crystal Structure Of Human Histone-Lysine N- Methyltransferase Smyd3 In Complex With S-Adenosyl-L- Methionine Length = 429 Back     alignment and structure
>pdb|3RU0|A Chain A, Cocrystal Structure Of Human Smyd3 With Inhibitor Sinefungin Bound Length = 438 Back     alignment and structure
>pdb|3QWP|A Chain A, Crystal Structure Of Set And Mynd Domain Containing 3; Zinc Finger Mynd Domain-Containing Protein 1 Length = 429 Back     alignment and structure
>pdb|3OXF|A Chain A, Human Lysine Methyltransferase Smyd3 In Complex With Adohcy (Form I) Length = 436 Back     alignment and structure
>pdb|3PDN|A Chain A, Crystal Structure Of Smyd3 In Complex With Methyltransferase Inhibitor Sinefungin Length = 428 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query118
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 1e-53
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 2e-44
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 2e-44
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 2e-44
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 2e-41
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 6e-31
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 5e-28
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 3e-27
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 1e-26
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 4e-26
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 8e-26
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 4e-25
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 2e-24
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 1e-19
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 3e-11
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 2e-09
3ihx_A152 PR domain zinc finger protein 10; PRDM10, methyltr 1e-08
3db5_A151 PR domain zinc finger protein 4; methyltransferase 7e-08
3dal_A196 PR domain zinc finger protein 1; methyltransferase 5e-07
3qwp_A 429 SET and MYND domain-containing protein 3; SMYD3,SE 7e-07
3qww_A 433 SET and MYND domain-containing protein 2; methyltr 4e-06
3n71_A 490 Histone lysine methyltransferase SMYD1; heart deve 3e-05
3ray_A237 PR domain-containing protein 11; structural genomi 7e-05
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 Back     alignment and structure
 Score =  165 bits (420), Expect = 1e-53
 Identities = 73/103 (70%), Positives = 86/103 (83%), Gaps = 1/103 (0%)

Query: 14  VIRASVSDKREKQYMDKGIGCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIM 73
           VIR+  +DKREK Y  KGIGCYMF+IDD  V+DATM GNAARFINHSC+PNCYSRV+ I 
Sbjct: 85  VIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDATMHGNAARFINHSCEPNCYSRVINID 144

Query: 74  GKPHIIIFALRKINKGEELTYDYKFPIEDD-NKISCHCLAMRC 115
           G+ HI+IFA+RKI +GEELTYDYKFPIED  NK+ C+C A +C
Sbjct: 145 GQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKC 187
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 Back     alignment and structure
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 Back     alignment and structure
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 Back     alignment and structure
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 Back     alignment and structure
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170 Back     alignment and structure
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Length = 152 Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151 Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196 Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Length = 490 Back     alignment and structure
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Length = 237 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query118
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 100.0
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 100.0
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 100.0
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 100.0
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 100.0
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 100.0
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 100.0
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 100.0
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 100.0
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 100.0
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 99.96
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 99.96
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 99.96
1h3i_A293 Histone H3 lysine 4 specific methyltransferase; 2. 99.95
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 99.95
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 99.94
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 99.84
3db5_A151 PR domain zinc finger protein 4; methyltransferase 99.83
3dal_A196 PR domain zinc finger protein 1; methyltransferase 99.78
3ray_A237 PR domain-containing protein 11; structural genomi 99.68
3ihx_A152 PR domain zinc finger protein 10; PRDM10, methyltr 99.62
3qwp_A 429 SET and MYND domain-containing protein 3; SMYD3,SE 99.47
3n71_A 490 Histone lysine methyltransferase SMYD1; heart deve 99.47
3qww_A 433 SET and MYND domain-containing protein 2; methyltr 99.41
3qxy_A 449 N-lysine methyltransferase SETD6; epigenetics, pro 98.41
2h21_A 440 Ribulose-1,5 bisphosphate carboxylase/oxygenase; S 98.28
3smt_A 497 Histone-lysine N-methyltransferase SETD3; histone 98.13
1wvo_A79 Sialic acid synthase; antifreeze protein like doma 87.33
3k3s_A105 Altronate hydrolase; structural genomics, PSI-2, p 80.12
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.4e-41  Score=236.58  Aligned_cols=118  Identities=31%  Similarity=0.563  Sum_probs=109.6

Q ss_pred             CCCCCeeEEeeeEEEChhHHHHHHHHHhhcCC-eeeEEEcCCcEEEecccCCCeeeeeecCCCCCceeEEEEECCccEEE
Q psy8096           1 MEEDCSVSVTLMAVIRASVSDKREKQYMDKGI-GCYMFKIDDRFVIDATMKGNAARFINHSCDPNCYSRVVEIMGKPHII   79 (118)
Q Consensus         1 I~~g~~i~ey~Gevi~~~~~~~~~~~~~~~~~-~~y~~~~~~~~~iDa~~~gn~~RfiNHSC~PN~~~~~~~~~~~~~~~   79 (118)
                      |++|++|+||+|||++..++..|...+..... +.|+|.++.+++|||+..||++|||||||.||+.++.+.+.+..+++
T Consensus       112 I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~  191 (232)
T 3ooi_A          112 IKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVG  191 (232)
T ss_dssp             BCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEE
T ss_pred             ecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEeccccccccccccccCCCCeEEEEEEECCceEEE
Confidence            79999999999999999999998776654443 48999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCeEEEccCCCCCCCCCeEEEecCCCccCC
Q psy8096          80 IFALRKINKGEELTYDYKFPIEDDNKISCHCLAMRCTNN  118 (118)
Q Consensus        80 ~~a~rdI~~GeElt~~Yg~~~~~~~~~~C~Cg~~~Cr~~  118 (118)
                      |||+|||++|||||+||+.++|....+.|.||+++|||.
T Consensus       192 ~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG~  230 (232)
T 3ooi_A          192 LFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGF  230 (232)
T ss_dssp             EEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCSB
T ss_pred             EEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcCc
Confidence            999999999999999999999988899999999999983
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Back     alignment and structure
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Back     alignment and structure
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Back     alignment and structure
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Back     alignment and structure
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Back     alignment and structure
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Back     alignment and structure
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Back     alignment and structure
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* Back     alignment and structure
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* Back     alignment and structure
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} Back     alignment and structure
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 118
d2f69a2171 b.85.7.1 (A:194-364) Histone H3 K4-specific methyl 2e-22
d1mvha_269 b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S 2e-21
d1ml9a_284 b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T 1e-14
d2g46a1119 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth 3e-12
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 Back     information, alignment and structure

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 2e-22
 Identities = 21/101 (20%), Positives = 31/101 (30%), Gaps = 4/101 (3%)

Query: 14  VIRASVSDKREKQYMDKGIG---CYMFKIDDRFVIDATMKGNAARFINHSCDPNC-YSRV 69
            I     D R+       +      +  + + +   +    +     NHS  PNC Y   
Sbjct: 56  RITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMF 115

Query: 70  VEIMGKPHIIIFALRKINKGEELTYDYKFPIEDDNKISCHC 110
           V     P   I  LR +   EELT  Y +      K     
Sbjct: 116 VHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEA 156
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 Back     information, alignment and structure
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query118
d1ml9a_284 Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} 100.0
d1mvha_269 SET domain of Clr4 {Fission yeast (Schizosaccharom 99.98
d2f69a2171 Histone H3 K4-specific methyltransferase SET7/9 ca 99.94
d2g46a1119 Viral histone H3 Lysine 27 Methyltransferase {Para 99.92
d2h2ja2261 RuBisCo LSMT catalytic domain {Garden pea (Pisum s 99.14
d1opsa_64 Type III antifreeze protein, AFP III {Ocean pout ( 90.77
d2h2ja2 261 RuBisCo LSMT catalytic domain {Garden pea (Pisum s 84.89
d2zdra168 Capsule biosynthesis protein SiaC, C-terminal doma 82.52
d1vlia172 Spore coat polysaccharide biosynthesis protein Sps 82.32
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Back     information, alignment and structure
class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Dim-5
species: Fungus (Neurospora crassa) [TaxId: 5141]

Probab=100.00  E-value=1.6e-33  Score=200.24  Aligned_cols=110  Identities=28%  Similarity=0.452  Sum_probs=85.6

Q ss_pred             CCCCCeeEEeeeEEEChhHHHHHHHHHhhcCC-eeeEEEcC--------------CcEEEecccCCCeeeeeecCCCCCc
Q psy8096           1 MEEDCSVSVTLMAVIRASVSDKREKQYMDKGI-GCYMFKID--------------DRFVIDATMKGNAARFINHSCDPNC   65 (118)
Q Consensus         1 I~~g~~i~ey~Gevi~~~~~~~~~~~~~~~~~-~~y~~~~~--------------~~~~iDa~~~gn~~RfiNHSC~PN~   65 (118)
                      |+||++|+||+||+++..++.++...+..... +.|++.++              ..++|||...||++|||||||+||+
T Consensus       145 I~kGt~I~eY~Gevi~~~ea~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~iDa~~~GN~aRfiNHSC~PN~  224 (284)
T d1ml9a_         145 IKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFALDKFSDPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNM  224 (284)
T ss_dssp             BCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSSSSCHHHHSCCCEEECSSEECGGGGCEECSSCSE
T ss_pred             cCCCCEEEEecCcccCHHHHHHHHHHHHhhccCCccceecccccccccccccccCCceeEeeeeccchhheeeccccCCc
Confidence            79999999999999999999988776654333 36777775              2468999999999999999999999


Q ss_pred             eeEEEEECC----ccEEEEEEcCCCCCCCeEEEccCCCCCCC-----------CCeEEEe
Q psy8096          66 YSRVVEIMG----KPHIIIFALRKINKGEELTYDYKFPIEDD-----------NKISCHC  110 (118)
Q Consensus        66 ~~~~~~~~~----~~~~~~~a~rdI~~GeElt~~Yg~~~~~~-----------~~~~C~C  110 (118)
                      +++.+.++.    .++++|||+|||++||||||||+..++..           ..++|+|
T Consensus       225 ~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dYg~~~~~~~~~~~~~~~~~~~~~C~C  284 (284)
T d1ml9a_         225 AIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLC  284 (284)
T ss_dssp             EEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC-----------------------
T ss_pred             ceEEEEeccCCCCceEEEEEECCccCCCCEEEEecCCCCCCchhhcchhhcccCCceeeC
Confidence            999888754    37899999999999999999999887643           1467887
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Back     information, alignment and structure
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1opsa_ b.85.1.1 (A:) Type III antifreeze protein, AFP III {Ocean pout (Macrozoarces americanus), different isoforms [TaxId: 8199]} Back     information, alignment and structure
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2zdra1 b.85.1.1 (A:282-349) Capsule biosynthesis protein SiaC, C-terminal domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1vlia1 b.85.1.1 (A:297-368) Spore coat polysaccharide biosynthesis protein SpsE, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure