Psyllid ID: psy8109

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010-
Protein Sequence
MDPRPGCVDVMLPVIKIDPERYIQVLLEIKKEINRKSDNLSKLLTKFSSLKRGEYPYGLKKIKRGPRLHKEIDSAVERMVKEKLGEMDSNEENEEEEEEERGGKRSKKRKRKAQETLDLDDLGDIVAGRKGNWSITKTPAEKNSQAKTNGVPTKKPKVTQDQWNIVTVSDKKETSKNPQSSDSNSDKALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLNSLKNKNKAKYR
Secondary Structure (PSIPRED)
ccccccccccHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccHHHHHcHHHHHHHccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHccccEEEHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHHcHHHHHHHHHHccccccccccccccHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccHHHHHHHHccccccccccccHHHHHHHHHccccccccccccEEEEccccccccccHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEcccccEEEHHHHcccccccccccHHHHHHHHHHHHHccccHHHcccccccccccccHHHHHHHHHHHHHHcccccccHcccccccccccHHHHHHHHcccccccccHHHHHHHccccEEEEEEccccccccccccccHHHHHHccccHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccEcccccEHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHcccHHEEEEEEHHHHHHHHHcccccccccccccccc
Coil and Loop (DISEMBL)
mdprpgcvdvmlpvikidPERYIQVLLEIKKEINRKSDNLSKLLTKfsslkrgeypyglkkikrgprlhKEIDSAVERMVKEKlgemdsneeneeeeeeerggkrskkRKRKAqetldlddlgdivagrkgnwsitktpaeknsqaktngvptkkpkvtqdqwNIVTVsdkketsknpqssdsnsdKALEEELTNIFKKfdllehpeylshsqGYKALCWALQEKKTDIAKLLVdkgvplnlvdkgvplnysrriietdtplhsaiLNSDIELVKLLLEkganplaieKSRNRTALHVAAIVESVDIVKLLFDYgaeksvnvqnvagltplhIACRRKCLEIVKILLdkgadinsgnddgctpLFCAIAQNCLEVFNYLVNhgcdlsvpegERTALHMASQFGNLEMVNYLLKHINinhqdkdgwtpltcsikgqASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIdinsendlgktpiyFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGvnlqdnkgctplhcaiVGNQLEVFNHLINsnaditmykndsplhlacatGNMDMITYAMKYFDVniendigetplhvaVSHGCLEAVKFLLNtknidvnhktkdgstaLFFACYDKRLDLVEILLEAnadvnlgdgtytpLYTALMKDPSLDIIKMLVKYgadvnltneacyymtplhyasyrgdcNDIARFLVEECNAditlrnfnnrtALNFAAFGNNLDLLKFLLKagadpdildlkdtspllssCRQGLYEIVDTLLEynadtnlrtikhgstalhTAAFHNQLDIIKLLLKYNAdinaedkygkiAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALlkcekpgdqekvsFYDILskhpaqvefyaknpqisncvkwkdlnlqfpiygdvICCKFTKVLNSLKnknkakyr
Flexible Loop (DISEMBL)
mdprpgcvdvmlpvikidperYIQVLLEIKKeinrksdnlsklltkfsslkrgeypyglkkikrgprlhkeidsAVERMVKEklgemdsneeneeeeeeerggkrskkrkrkaqetldlddlgdivagrkgnwsitktpaeknsqaktngvptkkpkvtqdqwnivtvsdkketsknpqssdsnsdkALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLlvdkgvplnlvdkgvplnysRRIIetdtplhsaILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNidvnhktkdgstALFFACYDKRLDLVEILLEanadvnlgdGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRaaniyvdkniMVQFLTTQVNDFYEECLREVALlkcekpgdQEKVSFYDILSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLnslknknkakyr
Low Complexity Region (SEG)
MDPRPGCVDVMLPVIKIDPERYIQVLLEIKKEINRKSDNlsklltkfsslkRGEYPYGLKKIKRGPRLHKEIDSAVERMVKEKLGEMDsneeneeeeeeerggkrskkrkrkAQETLDLDDLGDIVAGRKGNWSITKTPAEKNSQAKTNGVPTKKPKVTQDQWNIVTVSDKKETSKNPQSSDSNSDKALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLNSLKNKNKAKYR
Disordered region (IsUnstruct)
******CVDVMLPVIKIDPERYIQVLLEIKKEINRK**NLSKLLTKFSSLKRGEYPYGLK***************************************************************DIVA*****************************************************************LTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLNS**********
Disordered Region (DISOPRED)
****PGCVDVMLPVIKIDPERYIQVLLEIKKEINRKSDNLSKLLTKFSSLKRGEYPYGLKKIKRGPRLHKEIDSAVERMVKEKLGEMDSNEENEEEEEEERGGKRSKKRKRKAQETLDLDDLGDIVAGRKGNWSITKTPAEKNSQAKTNGVPTKKPKVTQDQWNIVTVSDKKETSKNPQSSDSNSDKALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVL************
Disordered Region (DISEMBL)
MDPRPGCVDVMLPVIKIDPERYIQVLLEIKKEINRKSDNLSKLLTKFSSLKRGEYPYGLKKIKRGPRLHKEIDSAVERMVKEKLG******************************TLDLDDLGDIVAGRKGNWSITKT*******************VTQDQWNIVTVS*******************LEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLNSLKNKNKAKYR
Disordered Region (DISPRO)
****PGCVDVMLPVIKIDPERYIQVLLEIKKEIN*KSDNLSKLLTKFSSLKRGEYPYGLKKIKRGPRLHKEIDSAVERMVKEKLGEMD****************RSKKRKRKAQETLDLDDLGDIVAGRKGNWSITKTPAEKNSQAKTNGVPTKKPKVTQDQWNIVTVSDKKETSKNPQSSDSNSDKALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLNS**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDPRPGCVDVMLPVIKIDPERYIQVxxxxxxxxxxxxxxxxxxxxxFSSLKRGEYPYGLKKIKRGPRLHKEIDSAVERMxxxxxxxxxxxxxxxxxxxxxRGGKRSKKRKRKAQETLDLDDLGDIVAGRKGNWSITKTPAEKNSQAKTNGVPTKKPKVTQDQWNIVTVSDKKETSKNPQSSDSNSDKALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLNSLKNKNKAKYR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	1011	2.2.26 [Sep-21-2011]
Q12955	4377	Ankyrin-3 OS=Homo sapiens	yes	N/A	0.609	0.140	0.294	6e-64
P16157	1881	Ankyrin-1 OS=Homo sapiens	no	N/A	0.606	0.325	0.293	2e-63
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	yes	N/A	0.609	0.314	0.291	1e-62
Q02357	1862	Ankyrin-1 OS=Mus musculus	no	N/A	0.604	0.328	0.293	6e-60
Q4UMH6	1179	Putative ankyrin repeat p	yes	N/A	0.531	0.455	0.311	6e-57
Q01484	3957	Ankyrin-2 OS=Homo sapiens	no	N/A	0.629	0.160	0.301	1e-56
Q8C8R3	3898	Ankyrin-2 OS=Mus musculus	no	N/A	0.629	0.163	0.298	4e-55
Q5F478	990	Serine/threonine-protein	no	N/A	0.610	0.623	0.274	1e-49
Q8NB46	1076	Serine/threonine-protein	no	N/A	0.638	0.600	0.276	4e-49
Q8BTI7	1076	Serine/threonine-protein	no	N/A	0.638	0.600	0.275	4e-49

>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3

 Score =  246 bits (629), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 197/668 (29%), Positives = 321/668 (48%), Gaps = 52/668 (7%)

Query: 262 LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVN 321
           LH A     +E+V  LL++ AN  A  K  N TALH+A++    ++VK+L   GA  +VN
Sbjct: 78  LHLASKEGHVEVVSELLQREANVDAATKKGN-TALHIASLAGQAEVVKVLVTNGA--NVN 134

Query: 322 VQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV- 380
            Q+  G TPL++A +   LE+VK LLD GA  +   +DG TPL  A+ Q   +V + L+ 
Sbjct: 135 AQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLE 194

Query: 381 ------------------------------NHGCDLSVPEGERTALHMASQFGNLEMVNY 410
                                         ++  D+    G  T LH+A+ +GN+ +   
Sbjct: 195 NDTKGKVRLPALHIAARKDDTKAAALLLQNDNNADVESKSG-FTPLHIAAHYGNINVATL 253

Query: 411 LL-KHININHQDKDGWTPL-TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYF 468
           LL +   ++   ++  TPL   S +G A++     +++ GA I AK  DG T LH     
Sbjct: 254 LLNRAAAVDFTARNDITPLHVASKRGNANMVKL--LLDRGAKIDAKTRDGLTPLHCGARS 311

Query: 469 GNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCL 527
           G+  +V  L+ +   I S+   G +P++ A + +HL    LLL+    V        T L
Sbjct: 312 GHEQVVEMLLDRAAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTAL 371

Query: 528 HVACEFASIEMVSFLL-SHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKN 586
           HVA      ++   LL      N +   G TPLH A   N+++V   L+   A I     
Sbjct: 372 HVAAHCGHYKVAKVLLDKKANPNAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTE 431

Query: 587 D--SPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNI 643
              +P+H+A   G++++++  M +    N  N  GET LH+A   G  E V++L+     
Sbjct: 432 SGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQ-DGA 490

Query: 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIK 702
            V  K KD  T L  +    + D+V+ LL+  A  N    + YTPL+ +  ++   D+  
Sbjct: 491 QVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLS-AREGHEDVAA 549

Query: 703 MLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFA 762
            L+ +GA +++T +  +  TPLH A+  G   ++A  L+++ +A       +  T L+ A
Sbjct: 550 FLLDHGASLSITTKKGF--TPLHVAAKYGKL-EVANLLLQK-SASPDAAGKSGLTPLHVA 605

Query: 763 AFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHG 822
           A  +N  +   LL  GA P        +PL  + ++   +I  TLLEY AD N  T + G
Sbjct: 606 AHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVT-RQG 664

Query: 823 STALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882
             ++H AA    +D++ LLL  NA++N  +K G    H A Q    ++   L++ G++++
Sbjct: 665 IASVHLAAQEGHVDMVSLLLGRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVD 724

Query: 883 KATKYRMT 890
             TK   T
Sbjct: 725 AQTKMGYT 732

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.
Homo sapiens (taxid: 9606)

>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3

 Score =  244 bits (624), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 197/671 (29%), Positives = 315/671 (46%), Gaps = 58/671 (8%)

Query: 262 LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVN 321
           LH A     +++V  LL K    L     +  TALH+AA+    ++V+ L +YGA  +VN
Sbjct: 49  LHLASKEGHVKMVVELLHKEII-LETTTKKGNTALHIAALAGQDEVVRELVNYGA--NVN 105

Query: 322 VQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN 381
            Q+  G TPL++A +   LE+VK LL+ GA+ N   +DG TPL  A+ Q    V  +L+N
Sbjct: 106 AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLIN 165

Query: 382 HGCDLSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEV 440
           +G    V      ALH+A++  +      LL++  N +   K G+TPL  +   + +L V
Sbjct: 166 YGTKGKV---RLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYE-NLNV 221

Query: 441 FHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV---KHIDINSENDLGKTPIYFA 497
              ++  GA +     +G T LH+A   GN+ MV  L+     I+  ++++L  TP++ A
Sbjct: 222 AQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDEL--TPLHCA 279

Query: 498 IKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLS------------- 544
            +N H+ I  +LL  GA +  K K+  + +H+A +   ++ V  LL              
Sbjct: 280 ARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHL 339

Query: 545 ---HIGVNLQDNK------------------GCTPLHCAIVGNQLEVFNHLINSNADITM 583
              H+  +   ++                  G TPLH A   N + V   L+ + A I  
Sbjct: 340 TPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGASIDA 399

Query: 584 YKND--SPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNT 640
                 +PLH+A   G++ ++   ++     N+ N   ETPLH+A   G  E  K+LL  
Sbjct: 400 VTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQN 459

Query: 641 KNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLG-DGTYTPLYTALMKDPSLD 699
           K   VN K KD  T L  A      ++V++LLE NA+ NL     +TPL+ A  +     
Sbjct: 460 K-AKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVET 518

Query: 700 IIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTAL 759
           ++ +L K  +   +T +     TPLH A+  G    +A  L+E  +A       N  T L
Sbjct: 519 VLALLEKEASQACMTKKG---FTPLHVAAKYGKVR-VAELLLER-DAHPNAAGKNGLTPL 573

Query: 760 NFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTI 819
           + A   NNLD++K LL  G  P        +PL  + +Q   E+  +LL+Y    N  ++
Sbjct: 574 HVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV 633

Query: 820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879
           + G T LH AA     +++ LLL   A+ N  +K G    H   Q  +  +   L+  G 
Sbjct: 634 Q-GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV 692

Query: 880 NIEKATKYRMT 890
            ++  T+   T
Sbjct: 693 MVDATTRMGYT 703

Isoform Mu17 together with obscurin in skeletal muscle may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Homo sapiens (taxid: 9606)

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score =  242 bits (617), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 195/668 (29%), Positives = 316/668 (47%), Gaps = 52/668 (7%)

Query: 262 LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVN 321
           LH A     +E+V  LL++ AN  A  K  N TALH+A++    ++VK+L   GA  +VN
Sbjct: 61  LHLASKEGHVEVVSELLQREANVDAATKKGN-TALHIASLAGQAEVVKVLVTNGA--NVN 117

Query: 322 VQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN 381
            Q+  G TPL++A +   LE+V+ LLD GA  +   +DG TPL  A+ Q   +V + L+ 
Sbjct: 118 AQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLE 177

Query: 382 H-------------------------------GCDLSVPEGERTALHMASQFGNLEMVNY 410
           +                                 D+    G  T LH+A+ +GN+ +   
Sbjct: 178 NDTKGKVRLPALHIAARKDDTKAAALLLQNDTNADVESKSG-FTPLHIAAHYGNINVATL 236

Query: 411 LL-KHININHQDKDGWTPL-TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYF 468
           LL +   ++   ++  TPL   S +G A++     +++ GA I AK  DG T LH     
Sbjct: 237 LLNRAAAVDFTARNDITPLHVASKRGNANMVKL--LLDRGAKIDAKTRDGLTPLHCGARS 294

Query: 469 GNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCL 527
           G+  +V  L+ +   I S+   G +P++ A + +HL    LLL+    V        T L
Sbjct: 295 GHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTAL 354

Query: 528 HVACEFASIEMVSFLL-SHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKN 586
           HVA      ++   LL      N +   G TPLH A   N++ V   L+   A I     
Sbjct: 355 HVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTE 414

Query: 587 D--SPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNI 643
              +P+H+A   G++++++  M +    N  N  GET LH+A   G  E V++L+     
Sbjct: 415 SGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQ-DGA 473

Query: 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIK 702
            V  K KD  T L  +    + D+V+ LL+  A  N    + YTPL+ A  ++   D+  
Sbjct: 474 QVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLA-AREGHEDVAA 532

Query: 703 MLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFA 762
            L+ +GA +++T +  +  TPLH A+  G     +  L +  + D   ++    T L+ A
Sbjct: 533 FLLDHGASLSITTKKGF--TPLHVAAKYGKLEVASLLLQKSASPDAAGKS--GLTPLHVA 588

Query: 763 AFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHG 822
           A  +N  +   LL  GA P        +PL  + ++   +I  +LLEY AD N  T + G
Sbjct: 589 AHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVT-RQG 647

Query: 823 STALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882
             ++H AA    +D++ LLL  NA++N  +K G    H A Q    ++   L++ G++++
Sbjct: 648 IASVHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVD 707

Query: 883 KATKYRMT 890
             TK   T
Sbjct: 708 AQTKMGYT 715

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.

Mus musculus (taxid: 10090)

>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2

 Score =  233 bits (594), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 193/657 (29%), Positives = 314/657 (47%), Gaps = 46/657 (7%)

Query: 260 TPLHSAILNSDIELVKLLLEKGAN----------PLAIE-----------------KSRN 292
           TPL+ A   + +E+VK LLE GAN          PLA+                  K + 
Sbjct: 109 TPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKV 168

Query: 293 R-TALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           R  ALH+AA  +      +L     + + +V +  G TPLHIA   + L + ++LL++GA
Sbjct: 169 RLPALHIAARNDDTRTAAVLLQN--DPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGA 226

Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV-PEGERTALHMASQFGNLEMVNY 410
            +N    +G TPL  A  +  + +   L++ G  +    + E T LH A++ G++ +   
Sbjct: 227 SVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVRISEI 286

Query: 411 LLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFG 469
           LL H   I  + K+G +P+  + +G   L+    +++  A+I    +D  T LH+A + G
Sbjct: 287 LLDHGAPIQAKTKNGLSPIHMAAQGD-HLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCG 345

Query: 470 NLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLH 528
           +  +   L+ K    NS    G TP++ A K NH+ +  LLLK GA +    +S  T LH
Sbjct: 346 HHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLH 405

Query: 529 VACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND 587
           VA     + +V  LL      N+ + K  TPLH A      EV  +L+ + A       D
Sbjct: 406 VASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKANAKAKD 465

Query: 588 --SPLHLACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNID 644
             +PLH A   G+  M+   ++     N+    G TPLH A   G ++    LL  K   
Sbjct: 466 DQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVDTALALLE-KEAS 524

Query: 645 VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNL-GDGTYTPLYTALMKDPSLDIIKM 703
               TK G T L  A    ++ L E+LLE +A  N  G    TPL+ A+  + +LDI+K+
Sbjct: 525 QACMTKKGFTPLHVAAKYGKVRLAELLLEHDAHPNAAGKNGLTPLHVAVHHN-NLDIVKL 583

Query: 704 LVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAA 763
           L+  G   +  + A    TPLH A+ +    ++AR L++         +    T L+ AA
Sbjct: 584 LLPRGGSPH--SPAWNGYTPLHIAAKQNQI-EVARSLLQ-YGGSANAESVQGVTPLHLAA 639

Query: 764 FGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGS 823
              + +++  LL   A+ ++ +    +PL    ++G   + D L+++    +  T + G 
Sbjct: 640 QEGHTEMVALLLSKQANGNLGNKSGLTPLHLVSQEGHVPVADVLIKHGVTVDA-TTRMGY 698

Query: 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
           T LH A+ +  + ++K LL++ AD+NA+ K G    H A Q  + DIVT LL  G++
Sbjct: 699 TPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS 755

Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein band 4.2, to Na-K ATPase, to the lymphocyte membrane protein GP85, and to the cytoskeletal proteins fodrin, tubulin, vimentin and desmin. Erythrocyte ankyrins also link spectrin (beta chain) to the cytoplasmic domain of the erythrocytes anion exchange protein; they retain most or all of these binding functions. In skeletal muscle, isoform Mu7 together with obscurin may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Mus musculus (taxid: 10090)

>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1

 Score =  223 bits (568), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 286/553 (51%), Gaps = 16/553 (2%)

Query: 339  CLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV-PEGERTALH 397
            C+E V +L+  GA+ N+ N  G   L CA     L++   L  +G D++   +   T LH
Sbjct: 617  CVESVPLLITHGANPNATNCHGVISLHCAAKNGNLDLAKLLAKNGADVNAKTDNGETVLH 676

Query: 398  MASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLM 456
             A + GNL +V +L++   NI+ +  +G T L  ++    S ++ + +I  GAD+ AK  
Sbjct: 677  YAVKSGNLHLVKWLIENQANIHAKTDNGETVLHYAVSFNNS-DLVYLLIAYGADVNAKTD 735

Query: 457  DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
            +G TALH A Y GNL +V+ L+ H  D+N++ + G+T +Y A+     ++  LL+  GAD
Sbjct: 736  NGLTALHYAVYDGNLDLVSLLISHGADVNAKTNSGETILYSAVDYGSPDLVYLLIAYGAD 795

Query: 516  VAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLI 575
            V  K  +  T LH A E  ++++VS L+ H G N+ + K  T LH A     L + N LI
Sbjct: 796  VNAKTDNGETVLHYAVESGNLDLVSLLI-HNGANVNNAK--TILHFAAKSGNLNLVNWLI 852

Query: 576  NSNADITMYKN--DSPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLE 632
             + ADI    N  ++ LH A  +GN++++ + +K   D++ + + GET LH A   G L 
Sbjct: 853  KNKADIHAKTNSGETILHFAAESGNLNLVNWLIKNKADIHAKTNSGETILHFAAKSGNLN 912

Query: 633  AVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTAL 692
             V +L+  K  D++ KT  G T L FA     L+LV  L++  AD++    +   +    
Sbjct: 913  LVNWLIKNK-ADIHAKTNSGETILHFAAKSGNLNLVNWLIKNKADIHAKTNSGETILHFA 971

Query: 693  MKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRN 752
             +  +L+++ +L+  G D+N   +    +T LHYA   G+ N ++  L+     D+  + 
Sbjct: 972  AESGNLNLVSLLIHNGTDINTKTDDG--LTALHYAVESGNLNLVS--LLIHKGIDVNAKT 1027

Query: 753  FNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNA 812
             +  T L+FA    +LDL+  L+  GAD +       + L  +       +V  L+ Y A
Sbjct: 1028 NSGETILHFAVDLGSLDLVSLLMVRGADVNAKTDDGLTALHYAVESDNLALVSLLMVYGA 1087

Query: 813  DTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVT 872
            D N +    G T LH A   N LD++ LL+   ADIN ++  G+   +S  +  N +I+ 
Sbjct: 1088 DVNAKN-NSGETPLHYAVIFNSLDLVSLLIHNGADINTKNNSGETVLNSIMEFNNCNILK 1146

Query: 873  FLLDAGSNIEKAT 885
              +  G++I   T
Sbjct: 1147 SFILGGADINLET 1159

Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456)

>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4

 Score =  222 bits (566), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 205/679 (30%), Positives = 322/679 (47%), Gaps = 43/679 (6%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLV--DKGVPLNYSRR---------IIETDT-- 260
           G+  L  A QE   D+ K L++ G   +    D   PL  + +         ++E DT  
Sbjct: 130 GFTPLYMAAQENHIDVVKYLLENGANQSTATEDGFTPLAVALQQGHNQAVAILLENDTKG 189

Query: 261 -----PLHSAILNSDIELVKLLLEKGANPLAIEKSR-NRTA------LHVAAIVESVDIV 308
                 LH A    D +   LLL+   N     K   NRT       LH+AA   +V++ 
Sbjct: 190 KVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTESGFTPLHIAAHYGNVNVA 249

Query: 309 KLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAI 368
            LL + GA      +N  G+TPLH+A +R    +VK+LLD+G  I++   DG TPL CA 
Sbjct: 250 TLLLNRGAAVDFTARN--GITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDGLTPLHCAA 307

Query: 369 AQNCLEVFNYLVNHGCDL-SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWT 426
                +V   L+  G  L +  +   + LHMA+Q  ++E V +LL+H   ++    D  T
Sbjct: 308 RSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVECVKHLLQHKAPVDDVTLDYLT 367

Query: 427 PLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINS 485
            L  +        V   +++  A+  A+ ++G T LH+AC    + ++  LVK+   I +
Sbjct: 368 ALHVAAHC-GHYRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVMELLVKYGASIQA 426

Query: 486 ENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
             + G TPI+ A    HL I  LLL+ GA   V      T LH+A     +E+V  LL +
Sbjct: 427 ITESGLTPIHVAAFMGHLNIVLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRN 486

Query: 546 IG-VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNA--DITMYKNDSPLHLACATGNMDMI 602
              V+ +  +  TPLH A    + E+   L+   A  D       +PLH++   G +D+ 
Sbjct: 487 GALVDARAREEQTPLHIASRLGKTEIVQLLLQHMAHPDAATTNGYTPLHISAREGQVDVA 546

Query: 603 TYAMKYFDVN-IENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACY 661
           +  ++    + +    G TPLHVA  +G L+  K LL  +    +   K+G T L  A +
Sbjct: 547 SVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQ-RRAAADSAGKNGLTPLHVAAH 605

Query: 662 DKRLDLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYY 720
                +  +LLE  A  +      YTPL+ A  K+  + I   L+ YGA+ N+  +    
Sbjct: 606 YDNQKVALLLLEKGASPHATAKNGYTPLHIAAKKN-QMQIASTLLNYGAETNIVTKQG-- 662

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
           +TPLH AS  G   D+   L+++  A+I +   +  T+L+ AA  + +++   L K GAD
Sbjct: 663 VTPLHLASQEGH-TDMVTLLLDK-GANIHMSTKSGLTSLHLAAQEDKVNVADILTKHGAD 720

Query: 781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKL 840
            D       +PL+ +C  G  ++V+ LL+  A+ N +T K+G T LH AA      II +
Sbjct: 721 QDAHTKLGYTPLIVACHYGNVKMVNFLLKQGANVNAKT-KNGYTPLHQAAQQGHTHIINV 779

Query: 841 LLKYNADINAEDKYGKIAF 859
           LL++ A  NA    G  A 
Sbjct: 780 LLQHGAKPNATTANGNTAL 798

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Homo sapiens (taxid: 9606)

>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2

 Score =  217 bits (552), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 203/679 (29%), Positives = 320/679 (47%), Gaps = 43/679 (6%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLV--DKGVPLNYSRR---------IIETDT-- 260
           G+  L  A QE   D+ K L++ G   +    D   PL  + +         ++E DT  
Sbjct: 130 GFTPLYMAAQENHIDVVKYLLENGANQSTATEDGFTPLAVALQQGHNQAVAILLENDTKG 189

Query: 261 -----PLHSAILNSDIELVKLLLEKGANPLAIEKSR-NRTA------LHVAAIVESVDIV 308
                 LH A    D +   LLL+   N     K   NRT       LH+AA   +V++ 
Sbjct: 190 KVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTESGFTPLHIAAHYGNVNVA 249

Query: 309 KLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAI 368
            LL + GA      +N  G+TPLH+A +R    +VK+LLD+G  I++   DG TPL CA 
Sbjct: 250 TLLLNRGAAVDFTARN--GITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDGLTPLHCAA 307

Query: 369 AQNCLEVFNYLVNHGCDL-SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWT 426
                +V   L+     L +  +   + LHMA+Q  ++E V +LL++   ++    D  T
Sbjct: 308 RSGHDQVVELLLERKAPLLARTKNGLSPLHMAAQGDHVECVKHLLQYKAPVDDVTLDYLT 367

Query: 427 PLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINS 485
            L  +        V   +++  A+  A+ ++G T LH+AC    + ++  LVK+   I +
Sbjct: 368 ALHVAAHC-GHYRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVMELLVKYGASIQA 426

Query: 486 ENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
             + G TPI+ A    HL I  LLL+ GA   V      T LH+A     +E+V  LL +
Sbjct: 427 ITESGLTPIHVAAFMGHLNIVLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRN 486

Query: 546 IG-VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNA--DITMYKNDSPLHLACATGNMDMI 602
              V+ +  +  TPLH A    + E+   L+   A  D       +PLH++   G +D+ 
Sbjct: 487 GALVDARAREEQTPLHIASRLGKTEIVQLLLQHMAHPDAATTNGYTPLHISAREGQVDVA 546

Query: 603 TYAMKYFDVN-IENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACY 661
           +  ++    + +    G TPLHVA  +G L+  K LL  +    +   K+G T L  A +
Sbjct: 547 SVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQ-RRAAADSAGKNGLTPLHVAAH 605

Query: 662 DKRLDLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYY 720
                +  +LLE  A  +      YTPL+ A  K+  + I   L+ YGA+ N   +    
Sbjct: 606 YDNQKVALLLLEKGASPHATAKNGYTPLHIAAKKN-QMQIASTLLNYGAETNTVTKQG-- 662

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
           +TPLH AS  G   D+   L+++  A+I +   +  T+L+ AA  + +++   L K GAD
Sbjct: 663 VTPLHLASQEGH-TDMVTLLLDK-GANIHMSTKSGLTSLHLAAQEDKVNVADILTKHGAD 720

Query: 781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKL 840
            D       +PL+ +C  G  ++V+ LL+  A+ N +T K+G T LH AA      II +
Sbjct: 721 RDAYTKLGYTPLIVACHYGNVKMVNFLLKQGANVNAKT-KNGYTPLHQAAQQGHTHIINV 779

Query: 841 LLKYNADINAEDKYGKIAF 859
           LL++ A  NA    G  A 
Sbjct: 780 LLQHGAKPNATTANGNTAL 798

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Mus musculus (taxid: 10090)

>sp|Q5F478|ANR44_CHICK Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus GN=ANKRD44 PE=2 SV=1

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 190/693 (27%), Positives = 318/693 (45%), Gaps = 76/693 (10%)

Query: 261 PLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSV 320
           PL  AI + D E +++L+ K  +  A++  + RT LHVA+ +   DI++LL   GA   V
Sbjct: 11  PLVQAIFSGDPEEIRMLIYKTEDVNALDAEK-RTPLHVASFLGDADIIELLILSGAR--V 67

Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
           N ++   LTPLH A   +  E V++L+   AD+N+ + +  TPL  A A   L+    ++
Sbjct: 68  NAKDNMWLTPLHRAVASRSEEAVQVLIKHSADVNARDKNWQTPLHVAAANKALKCAEIII 127

Query: 381 NHGCDLSVPE-GERTALHMASQFGNLEMVNYLLK---HIN-------------------- 416
                ++V + G RTALH A+  G++EMVN LL    +IN                    
Sbjct: 128 PMLSSVNVSDRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLE 187

Query: 417 -----INH------QDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLA 465
                INH      +DK G+TPL  +      + +   ++  G +I    + G TALH+A
Sbjct: 188 VVALLINHGAEVTCKDKKGYTPLHAA-ASNGQINIVKHLLNLGVEIDEMNIYGNTALHIA 246

Query: 466 CYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEI-FNLLLKLGADVAVKMKSN 523
           CY G  ++VN L+ +  ++N  N+ G TP++FA  + H  +   LL+  GADV ++ K  
Sbjct: 247 CYNGQDSVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLVNNGADVNIQSKDG 306

Query: 524 FTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADIT 582
            + LH+            L+ + G ++  D  G TPLH A       + N LI S AD  
Sbjct: 307 KSPLHMTAVHGRFTRSQTLIQNGGEIDCVDKDGNTPLHVAARYGHELLINTLITSGADTA 366

Query: 583 M--YKNDSPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLN 639
                N  PLHLA    + D     +   F+++  +  G T LH A + G +E +K LL 
Sbjct: 367 KCGIHNMFPLHLAALNAHSDCCRKLLSSGFEIDTPDSFGRTCLHAAAAGGNVECIK-LLQ 425

Query: 640 TKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN-LGDGTYTPLY--------- 689
           +   D N K K G T L +A  +     +E L+   A++N   D   TPL+         
Sbjct: 426 SSGADFNKKDKRGRTPLHYAAANCHFHCIETLVTTGANINETDDWGRTPLHYAAASDMDR 485

Query: 690 -----------------TALMKDPSLDI-IKMLVKYGADVNLTNEACYYMTPLHYASYRG 731
                            T+ MK+    + ++ L++  A+ ++ ++  Y    +HYA+  G
Sbjct: 486 KKNILGNSHENAEELERTSEMKEKEAALCLEFLLQNDANPSIQDKEGY--NTVHYAAAYG 543

Query: 732 DCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSP 791
               +   L +  N      +   ++ L+ AA+  +   L+ LL++  D DI D K  + 
Sbjct: 544 HRQCLELLLEKNSNMFEESDSSATKSPLHLAAYNGHHQALEVLLQSLVDLDIKDEKGRTA 603

Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           L  +  +G  E V+ L+   A   ++      T LH +  +     ++LLL+   + +  
Sbjct: 604 LDLAAFKGHAECVEALISQGASVTVKDNVTKRTPLHASVINGHTPCLRLLLEVADNPDVT 663

Query: 852 DKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKA 884
           D  G+     A    + D V+ LL+  ++++ A
Sbjct: 664 DAKGQTPLMLAVAYGHIDAVSLLLEKEASVDAA 696

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Gallus gallus (taxid: 9031)

>sp|Q8NB46|ANR52_HUMAN Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Homo sapiens GN=ANKRD52 PE=1 SV=3

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 220/796 (27%), Positives = 349/796 (43%), Gaps = 150/796 (18%)

Query: 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIE 272
            G  AL  A+     +   LL++KG  LN+ DK           +   PLH A     +E
Sbjct: 139 SGRSALHHAVHSGHLETVNLLLNKGASLNVCDK-----------KERQPLHWAAFLGHLE 187

Query: 273 LVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLH 332
           ++KLL+ +GA+ L  +  +    LH AA    +++VK L   GAE  ++  N  G T LH
Sbjct: 188 VLKLLVARGAD-LGCKDRKGYGLLHTAAASGQIEVVKYLLRMGAE--IDEPNAFGNTALH 244

Query: 333 IACRRKCLEIVKILLDKGADINSGNDDGCTPL-FCAIAQNCLEVFNYLVNHGCDLSVPEG 391
           IAC      +   L++ GA++N  ND G TPL   A++ N       LVN+G D++    
Sbjct: 245 IACYLGQDAVAIELVNAGANVNQPNDKGFTPLHVAAVSTNGALCLELLVNNGADVNYQSK 304

Query: 392 E-RTALHMASQFGNLEMVNYLLKHIN-INHQDKDGWTPLTCSIKGQASLEVFHSIIEAGA 449
           E ++ LHMA+  G       L+++ + I+  DK G TPL  + +    L +  +++  GA
Sbjct: 305 EGKSPLHMAAIHGRFTRSQILIQNGSEIDCADKFGNTPLHVAARYGHEL-LISTLMTNGA 363

Query: 450 DIKAKLMDGTTALHLACYFG-------------------NLAMVNYLVKHIDINSENDLG 490
           D   + +     LHLA  FG                   +L+  + L    DIN+ ++LG
Sbjct: 364 DTARRGIHDMFPLHLAVLFGFSDCCRKLLSSGQLYSIVSSLSNEHVLSAGFDINTPDNLG 423

Query: 491 KTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIE-MVSFLLSHIGVN 549
           +T ++ A    ++E  NLLL  GAD+  + K   T LH A    S +  V+ + +  GVN
Sbjct: 424 RTCLHAAASGGNVECLNLLLSSGADLRRRDKFGRTPLHYAAANGSYQCAVTLVTAGAGVN 483

Query: 550 LQDNKGCTPLHCAIVGN-------------------------QLEVF---NHLINSNADI 581
             D KGC+PLH A   +                         + E F     L+++ AD 
Sbjct: 484 EADCKGCSPLHYAAASDTYRRAEPHTPSSHDAEEDEPLKESRRKEAFFCLEFLLDNGADP 543

Query: 582 TM--YKNDSPLHLACATGNMDMITYAMKY-FDV--NIENDIGETPLHVAVSHGCLEAVKF 636
           ++   +  + +H A A GN   +   ++  F+   ++E+ I  +PLH+A  +G  EA+K 
Sbjct: 544 SLRDRQGYTAVHYAAAYGNRQNLELLLEMSFNCLEDVESTIPVSPLHLAAYNGHCEALKT 603

Query: 637 LLNT-KNIDV-NHKTKDGSTALFFACYDKRLDLVEILLE--ANADVNLGDGTYTPLYTAL 692
           L  T  N+DV +HK   G TALF A      + VE+L    A+A +      +TPL+ A 
Sbjct: 604 LAETLVNLDVRDHK---GRTALFLATERGSTECVEVLTAHGASALIKERKRKWTPLHAAA 660

Query: 693 MKDPSLDIIKMLVKYGADVNLTNEA-CYYMTPLHYASYRG--DC---------------- 733
               + D + +L+  G   ++T+    Y  TPL  A   G  DC                
Sbjct: 661 ASGHT-DSLHLLIDSGERADITDVMDAYGQTPLMLAIMNGHVDCVHLLLEKGSTADAADL 719

Query: 734 ---NDIARFLVEEC----------NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
                + R  V  C          +A +  R+F  RT ++ A+   +  +L+ LL+A   
Sbjct: 720 RGRTALHRGAVTGCEDCLAALLDHDAFVLCRDFKGRTPIHLASACGHTAVLRTLLQAALS 779

Query: 781 PDIL----DLKDTSPLLSSCRQGLYEIVDTLLEY--------------------NADT-- 814
            D L    D    SP+  +   G  + ++ LLE+                    N D+  
Sbjct: 780 TDPLDAGVDYSGYSPMHWASYTGHEDCLELLLEHSPFSYLEGNPFTPLHCAVINNQDSTT 839

Query: 815 ------------NLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
                       N R  K G T LH AAF + +  +++LL++ A++NA D  G+ A  +A
Sbjct: 840 EMLLGALGAKIVNSRDAK-GRTPLHAAAFADNVSGLRMLLQHQAEVNATDHTGRTALMTA 898

Query: 863 CQAKNWDIVTFLLDAG 878
            +      V FLL  G
Sbjct: 899 AENGQTAAVEFLLYRG 914

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Homo sapiens (taxid: 9606)

>sp|Q8BTI7|ANR52_MOUSE Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Mus musculus GN=Ankrd52 PE=2 SV=1

 Score =  197 bits (500), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 219/796 (27%), Positives = 350/796 (43%), Gaps = 150/796 (18%)

Query: 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIE 272
            G  AL  A+     +   LL++KG  LN+ DK           +   PLH A     +E
Sbjct: 139 SGRSALHHAVHSGHLETVNLLLNKGASLNVCDK-----------KERQPLHWAAFLGHLE 187

Query: 273 LVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLH 332
           ++KLL+ +GA+ L+ +  +    LH AA    +++VK L   GAE  ++  N  G T LH
Sbjct: 188 VLKLLVARGAD-LSCKDRKGYGLLHTAAASGQIEVVKHLLRMGAE--IDEPNAFGNTALH 244

Query: 333 IACRRKCLEIVKILLDKGADINSGNDDGCTPL-FCAIAQNCLEVFNYLVNHGCDLSVPEG 391
           IAC      +   L++ GA++N  ND G TPL   A++ N       LVN+G D++    
Sbjct: 245 IACYLGQDAVAIELVNAGANVNQPNDKGFTPLHVAAVSTNGALCLELLVNNGADVNYQSK 304

Query: 392 E-RTALHMASQFGNLEMVNYLLKHIN-INHQDKDGWTPLTCSIKGQASLEVFHSIIEAGA 449
           E ++ LHMA+  G       L+++ + I+  DK G TPL  + +    L +  +++  GA
Sbjct: 305 EGKSPLHMAAIHGRFTRSQILIQNGSEIDCADKFGNTPLHVAARYGHEL-LISTLMTNGA 363

Query: 450 DIKAKLMDGTTALHLACYFG-------------------NLAMVNYLVKHIDINSENDLG 490
           D   + +     LHLA  FG                   +L+  + L    DIN+ + LG
Sbjct: 364 DTARRGIHDMFPLHLAVLFGFSDCCRKLLSSGQLYSIVSSLSNEHVLSAGFDINTPDSLG 423

Query: 491 KTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIE-MVSFLLSHIGVN 549
           +T ++ A    ++E  NLLL  GAD+  + K   T LH A    S +  V+ + +  GVN
Sbjct: 424 RTCLHAAASGGNVECLNLLLSSGADLRRRDKFGRTPLHYAAANGSYQCAVTLVTAGAGVN 483

Query: 550 LQDNKGCTPLHCAIVGN-------------------------QLEVF---NHLINSNADI 581
             D KGC+PLH A   +                         + E F     L+++ AD 
Sbjct: 484 EADCKGCSPLHYAAASDTYRRAEPHTASSHDAEEDELLKESRRKEAFFCLEFLLDNGADP 543

Query: 582 TM--YKNDSPLHLACATGNMDMITYAMKY-FDV--NIENDIGETPLHVAVSHGCLEAVKF 636
           ++   +  + +H A A GN   +   ++  F+   ++E+ +  +PLH+A  +G  EA+K 
Sbjct: 544 SLRDRQGYTAVHYAAAYGNRQNLELLLEMSFNCLEDVESTVPVSPLHLAAYNGHCEALKT 603

Query: 637 LLNT-KNIDV-NHKTKDGSTALFFACYDKRLDLVEILLE--ANADVNLGDGTYTPLYTAL 692
           L  T  N+DV +HK   G TALF A      + VE+L    A+A +      +TPL+ A 
Sbjct: 604 LAETLVNLDVRDHK---GRTALFLATERGSTECVEVLTAHGASALIKERKRKWTPLHAAA 660

Query: 693 MKDPSLDIIKMLVKYGADVNLTNEA-CYYMTPLHYASYRG--DC---------------- 733
               + D + +L+  G   ++T+    Y  TPL  A   G  DC                
Sbjct: 661 ASGHT-DSLHLLIDSGERADITDVMDAYGQTPLMLAIMNGHVDCVHLLLEKGSTADAADL 719

Query: 734 ---NDIARFLVEEC----------NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
                + R  V  C          +A +  R+F  RT ++ A+   +  +L+ LL+A   
Sbjct: 720 RGRTALHRGAVTGCEDCLAALLDHDAFVLCRDFKGRTPIHLASACGHTAVLRTLLQAALS 779

Query: 781 PDIL----DLKDTSPLLSSCRQGLYEIVDTLLEY--------------------NADT-- 814
            D L    D    SP+  +   G  + ++ LLE+                    N D+  
Sbjct: 780 TDPLDAGVDYSGYSPMHWASYTGHEDCLELLLEHSPFSYLEGNPFTPLHCAVINNQDSTT 839

Query: 815 ------------NLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
                       N R  K G T LH AAF + +  +++LL++ A++NA D  G+ A  +A
Sbjct: 840 EMLLGALGAKIVNSRDAK-GRTPLHAAAFADNVSGLRMLLQHQAEVNATDHTGRTALMTA 898

Query: 863 CQAKNWDIVTFLLDAG 878
            ++     V FLL  G
Sbjct: 899 AESGQTAAVEFLLYRG 914

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1011
189502738	1585	hypothetical protein Aasi_1435 [Candidat	0.648	0.413	0.351	2e-89
390357740	3120	PREDICTED: uncharacterized protein LOC75	0.652	0.211	0.321	5e-82
157106769	789	ankyrin 2,3/unc44 [Aedes aegypti] gi|108	0.604	0.774	0.325	9e-79
390357742	770	PREDICTED: serine/threonine-protein phos	0.644	0.846	0.307	1e-78
353328673	946	ankyrin repeat domain protein [Wolbachia	0.747	0.799	0.299	4e-78
390367550	2382	PREDICTED: uncharacterized protein LOC75	0.650	0.276	0.316	2e-77
390342455	1487	PREDICTED: ankyrin-1-like [Strongylocent	0.655	0.445	0.298	5e-77
390349089	2331	PREDICTED: uncharacterized protein LOC58	0.666	0.289	0.318	6e-77
390368544	2160	PREDICTED: uncharacterized protein LOC10	0.626	0.293	0.319	1e-76
390343598	1639	PREDICTED: serine/threonine-protein phos	0.636	0.392	0.329	1e-76

>gi|189502738|ref|YP_001958455.1| hypothetical protein Aasi_1435 [Candidatus Amoebophilus asiaticus 5a2] gi|189498179|gb|ACE06726.1| hypothetical protein Aasi_1435 [Candidatus Amoebophilus asiaticus 5a2]

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 252/717 (35%), Positives = 393/717 (54%), Gaps = 61/717 (8%)

Query: 214  GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
            G  +L +A +E   ++ K LV+KG  +N  D+           + +T LH A    ++E+
Sbjct: 801  GVTSLHYACREGNLEVVKYLVEKGADINATDE-----------DGETLLHYACNKGNLEV 849

Query: 274  VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            VKLL++KGA+ + I+ +   TALH A   + ++IVK L D GA+  +  +N    T L  
Sbjct: 850  VKLLVDKGAD-INIKSNDQCTALHFATRYDHLEIVKYLLDKGAD--IQAKNKEVETLLIY 906

Query: 334  ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGER 393
            AC++  LE+VK L+DKG+DIN  N +  T L  A     LE+  YL++ G D++V   ++
Sbjct: 907  ACKKGDLEVVKNLVDKGSDINVKNKNQWTALHFATRYGHLEIVKYLLDKGADINVKNNDQ 966

Query: 394  -TALHMASQFGNLEMVNYLL-KHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
             TALH A+++ +LE+V YLL K  +IN ++ D WT L  + +    LE+   ++E GADI
Sbjct: 967  WTALHFATRYNHLEIVKYLLDKGADINVKNNDQWTALHFATR-YNHLEIVKLLLEKGADI 1025

Query: 452  KAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
             AK   G T LH AC  G+L +V YL+ K  DIN +N+   T ++FA + NHL+I  LLL
Sbjct: 1026 NAKNKYGNTTLHKACENGHLEVVKYLLDKGADINVKNNDQWTALHFATRYNHLKIVKLLL 1085

Query: 511  KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLE 569
              GAD+  K K   T LH ACE   +E+V  LL     +N+++N   T LH A   N LE
Sbjct: 1086 DKGADINAKNKEGNTTLHKACENDHLEIVKLLLDKGADINVKNNDQWTALHFATRYNHLE 1145

Query: 570  VFNHLINSNADITMYKND--SPLHLACATGNMDMITYAM-KYFDVNIENDIGETPLHVAV 626
            +  +L++  ADI +  ND  + LH A    ++ ++ Y + K  D+N++++   T LH A 
Sbjct: 1146 IVKYLLDKGADINVKNNDQWTALHFATRYDHLKIVKYLLDKGADINVKDNDQWTALHFAT 1205

Query: 627  SHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNL-GDGTY 685
             +  L+ VK LL  K  D++ K K+  T L +AC    L+LV+ LL+  AD+N+  +  +
Sbjct: 1206 RYDHLKIVKLLL-EKGADIHAKNKESETLLIYACKKGDLELVKYLLDKGADINVKNNDQW 1264

Query: 686  TPLY-----------------------------TALMK---DPSLDIIKMLVKYGADVNL 713
            T L+                             T L K   +  L+I+K+L+  GAD+N+
Sbjct: 1265 TALHFVTRYNHLEIVKYLLDKGADINAKNKYGNTTLHKACENDHLEIVKLLLDKGADINV 1324

Query: 714  TNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKF 773
             N   +  T LH+A+ R +  +I ++L+++  ADI ++N +   AL+FA   N+L+++K+
Sbjct: 1325 KNNDQW--TALHFAT-RYNHLEIVKYLLDK-GADINVKNNDQWIALHFATRYNHLEIVKY 1380

Query: 774  LLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHN 833
            LL  GAD ++ +      L  + R    +IV  LL+  AD N++      TALH A  ++
Sbjct: 1381 LLDKGADINVKNNDQWIALHFATRYNHLKIVKLLLDKGADINVKN-NDQWTALHFATRYD 1439

Query: 834  QLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
             L+I+K LL   ADIN ++K    A H A +  +  IV  LLD G++I    KY  T
Sbjct: 1440 HLEIVKYLLDKGADINVKNKNQWTALHFATRYNHLKIVKLLLDKGADIHAKNKYGNT 1496

Source: Candidatus Amoebophilus asiaticus 5a2

Species: Candidatus Amoebophilus asiaticus

Genus: Candidatus Amoebophilus

Phylum: Bacteroidetes

Superkingdom: Bacteria

>gi|390357740|ref|XP_001188247.2| PREDICTED: uncharacterized protein LOC755074 [Strongylocentrotus purpuratus]

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 226/703 (32%), Positives = 359/703 (51%), Gaps = 43/703 (6%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVP-----------LNYSRRIIETD--- 259
           G  AL  A QE    + K L+ +G  +N V +G             L+ ++ +I      
Sbjct: 252 GRIALHSAAQEGHLGVTKYLLSQGANVNTVGEGGETVLRLAANKGHLDVTKYLISRGAEV 311

Query: 260 --------TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLL 311
                   T LHSA     +++ K L+ +GA+ +  E +  RTALH+AA    +D+ K +
Sbjct: 312 NQESNSGWTTLHSAAQEGHLDVTKYLISQGAD-VNQESNIGRTALHLAAQGGHLDVTKYI 370

Query: 312 FDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN 371
              GA+  VN ++  G T LH A +   L + K LL +GAD+N  ++ G T L  A    
Sbjct: 371 LSQGAD--VNQESKIGRTALHSAAQEGHLGVTKYLLSQGADVNQESNIGRTALHLAAQNG 428

Query: 372 CLEVFNYLVNHGCDLSVPEG-ERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLT 429
            L+V  Y+++ G D++      RTALH A+  G+L++  Y++    ++N +   GWT L 
Sbjct: 429 HLDVTKYVISQGADVNQESNIGRTALHSAAHKGHLDVTKYVISQGADVNQESDCGWTALH 488

Query: 430 CSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSEND 488
            + K +  L+V   +I  GAD+  +   G TALH A   G L +  YL+    D+N E++
Sbjct: 489 SAAK-EGHLDVTKYLISQGADVNQESNIGRTALHSAAQNGRLDVTKYLISQGADVNKESN 547

Query: 489 LGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG- 547
            G+T +Y A +  +L++   LL  GA+V    +   T LH+A +   I++  +L+S    
Sbjct: 548 SGRTALYSAAQEGYLDVTKYLLSQGANVNTVGEGGETVLHLAAQIGHIDVTKYLISQGDD 607

Query: 548 VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND---SPLHLACATGNMDMITY 604
           VN + N G T LH A     L V N+LI   A++    ND   + LHLA    ++D+  Y
Sbjct: 608 VNKESNSGRTALHSAAQEGHLGVSNYLIGQGAEVNK-GNDCCRTALHLAAQNSHLDVTKY 666

Query: 605 AM-KYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK 663
            + +  DVN E++   T LH A   G L+  K+LL ++  DVN    DG TAL FA  + 
Sbjct: 667 LISQGADVNKESNSDRTALHSAAEKGHLDVTKYLL-SQGADVNTGVSDGRTALHFAALNG 725

Query: 664 RLDLVEILLEANADVNL-GDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMT 722
            LD+ + L+   AD+       +T L+ A  +D  LD+ K L+  GADV    E+    T
Sbjct: 726 HLDVTKYLISQGADIERETKQGFTALHDA-SQDGHLDVTKYLISQGADVK--KESKNGFT 782

Query: 723 PLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPD 782
             H A+ +G+  D+ R+L+ +  A++   + +  TAL+ AA+ ++LD+ K+L+  GAD +
Sbjct: 783 AFHIAAQKGNL-DVTRYLISQ-GAEVNKEDKDGFTALHQAAYNSHLDVTKYLISQGADVN 840

Query: 783 ILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLL 842
                  + L  S ++G   +   L+   AD   + I  G TALH AAF   LD+ K L+
Sbjct: 841 EGHNDGRTALHLSAQEGHLGVTKYLISQEADLE-KEINDGFTALHLAAFSGHLDVTKYLI 899

Query: 843 KYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKAT 885
              AD+  ED YG+ A H A Q  + D+  +L+  G ++ K +
Sbjct: 900 SQGADVIKEDTYGRTALHGASQNGHIDVTEYLISQGDDVNKQS 942

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|157106769|ref|XP_001649474.1| ankyrin 2,3/unc44 [Aedes aegypti] gi|108868779|gb|EAT33004.1| AAEL014742-PA, partial [Aedes aegypti]

 Score =  301 bits (772), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 209/643 (32%), Positives = 343/643 (53%), Gaps = 32/643 (4%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPLH A  N  +++VKLL++ GAN +  E     T LH+AA    +++VKLL D GA  +
Sbjct: 21  TPLHVASQNGHLKVVKLLIDNGAN-VDTEGDEGWTPLHLAAENGYLEVVKLLIDNGA--N 77

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           V+     G TPLH+A     LE+VK+L+D  A++++  + G TPL  A     LEV   L
Sbjct: 78  VDTTQDEGWTPLHLAAENGHLEVVKLLIDNRANVDTKKNGGWTPLHVASQNGHLEVVKLL 137

Query: 380 VNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLL-KHININHQDKDGWTPLTCSIKGQAS 437
           + +  ++   + E  T LH ASQ G+LE+V +L+    N++    +GWTPL  + +    
Sbjct: 138 IENRANVDTKKNEGWTPLHFASQNGHLEVVKFLIDNRANVDTTQDEGWTPLHVASQ-NGH 196

Query: 438 LEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYF 496
           LEV   +IE  A++  K  +G T LH A   G+L +V +L+    ++++  D G TP++ 
Sbjct: 197 LEVVKLLIENRANVDTKKNEGWTPLHFASQNGHLEVVKFLIDNRANVDTTQDEGWTPLHL 256

Query: 497 AIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLL-SHIGVNLQDNKG 555
           A +N HLE+  LL++  A+V  K    +T LHVA +   +E+V FL+ +   V+    +G
Sbjct: 257 AAENGHLEVVKLLIENRANVDTKKNGGWTPLHVASQNGHLEVVKFLIDNRANVDTTQYEG 316

Query: 556 CTPLHCAIVGNQLEVFNHLIN--SNADITMYKNDSPLHLACATGNMDMITYAM------- 606
            TPLH A     LEV   LI+  +N D T  K  +PLH A   G+++++   +       
Sbjct: 317 WTPLHVASQNGHLEVVKLLIDNKANVDTTQNKGITPLHFASQNGHLEVVKLLIDNRANVV 376

Query: 607 -----KYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACY 661
                   +V+   + G TPLH A  +G LE VK L+  +  +V     +G T L FA  
Sbjct: 377 KLLIENRANVDTTQNKGITPLHFASQNGHLEVVKLLIENR-ANVGTTQNEGWTPLHFASR 435

Query: 662 DKRLDLVEILLE--ANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACY 719
           +  L++V++L+E  AN D    +G +TPLY A + +  L+++K+L+   A+V+ T    +
Sbjct: 436 NGHLEVVKLLIENRANVDTTQNEG-WTPLYVASI-NGHLEVVKLLINNRANVDTTQNEGW 493

Query: 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA 779
             TPL+ AS  G    +   +  + N D T       T L+ A+   +L+++K L+   A
Sbjct: 494 --TPLYVASKNGHLEVVKLLIDNKANVDTTQNE--GWTPLHVASQNGHLEVVKLLIDNRA 549

Query: 780 DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839
           + D    K  +PL  + + G  E+V  L++  A+ +  T   G T LH A+ +  L+++K
Sbjct: 550 NVDTTKNKGITPLYVASKNGHLEVVKLLIDNKANVD-TTDNEGWTPLHVASQNGHLEVVK 608

Query: 840 LLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882
           LL++  A+++     G    H A Q  + ++V  L+D  +N++
Sbjct: 609 LLIENRANVDTTQNKGITPLHFASQNGHLEVVKLLIDNRANVD 651

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390357742|ref|XP_003729086.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like, partial [Strongylocentrotus purpuratus]

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 214/695 (30%), Positives = 359/695 (51%), Gaps = 43/695 (6%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G+ AL  A      D+ K L+ +G  +   D      Y R      T LHSA  N  I++
Sbjct: 90  GFTALHLAAFSGHLDVTKYLISQGADVIKEDT-----YGR------TALHSASQNGHIDV 138

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            + L+ +G + +  + + + TALH+AA    +D+ K L   GAE  VN ++  G T LH 
Sbjct: 139 TEYLISQG-DDVNKQSNDDFTALHLAAFSGHLDVTKYLISQGAE--VNKEDTYGRTALHG 195

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE- 392
           A +   +++ + L+ +G D+N  ++DG T L  A      +V  +L++ G DL+    + 
Sbjct: 196 ASQNGHIDVTEYLISQGDDVNKQSNDGFTALHLAAFNGHFDVTKHLISQGADLNEGHNDG 255

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLT-CSIKGQASLEVFHSIIEAGAD 450
           RTALH+++Q G+L+++ Y+++   ++N +D DG T L   +  G    +V   +I  GAD
Sbjct: 256 RTALHLSAQEGHLDVIKYIIRQGADVNQEDNDGETALHLAAFNGH--FDVTKHLISQGAD 313

Query: 451 I---------KAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKN 500
           +         + +  DG TALHLA + G+L +  YL+    D+  E+  G+T ++ A +N
Sbjct: 314 VNEGHNDADLEKESNDGFTALHLAAFSGHLDVTKYLISQGADVIKEDTYGRTALHSASQN 373

Query: 501 NHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTPL 559
            H+++   L+  G DV  +   +FT LH+A     + +  +L+S    VN +D  G T L
Sbjct: 374 GHIDVTEYLISQGDDVNKQSNDDFTALHLAAFSGHLNVTKYLISQGAEVNKEDTYGRTAL 433

Query: 560 HCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAM-KYFDVNIEND 616
           H A     ++V  +LI+   D+    ND  + LHLA  +G +D+  Y + +  +VN E++
Sbjct: 434 HGASQNGHIDVTEYLISQGDDVNKQSNDGFTALHLAAFSGYLDVTKYLISQGAEVNKEDN 493

Query: 617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANA 676
             ET LH A  +G L+ +K+L+  +  DVN    DG TAL  +  +  LD+++ ++   A
Sbjct: 494 DSETALHCASQNGHLDVIKYLVG-QGGDVN--NNDGRTALHLSAQEGHLDVIKYIIRQGA 550

Query: 677 DVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCND 735
           DVN  D    T L+ A   +   D+ K L+  GADVN  +      T LH ++  G    
Sbjct: 551 DVNQEDNDGETALHLAAF-NGHFDVTKHLISQGADVNEGHNDG--RTALHLSAQEGHLG- 606

Query: 736 IARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSS 795
           + ++L+ +  AD+   + +  TAL+ A F  +LD+ K+L+  GAD    D    + L  +
Sbjct: 607 VTKYLISQ-EADVEKESNDGFTALHLADFSGHLDVTKYLISLGADVIKEDTYGRTALHGA 665

Query: 796 CRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
            + G  ++ + L+    D N ++     TALH AAF   LD+ K L+   A++N ED YG
Sbjct: 666 SQNGHIDVTEYLISQGDDVNKQS-NDDFTALHLAAFSGHLDVTKYLISQGAEVNKEDTYG 724

Query: 856 KIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           + A H A Q  + D+  +L+  G ++ K +    T
Sbjct: 725 RTALHGASQNGHIDVTEYLISQGDDVNKQSNDGFT 759

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|353328673|ref|ZP_08971000.1| ankyrin repeat domain protein [Wolbachia endosymbiont wVitB of Nasonia vitripennis] gi|321272303|gb|ADW80188.1| ankyrin repeat protein [Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1] gi|321272355|gb|ADW80236.1| ankyrin repeat protein [Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB]

 Score =  300 bits (767), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 258/862 (29%), Positives = 426/862 (49%), Gaps = 106/862 (12%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI 271
           S+GY  L  A++ K T + KLL+  G  +N          S+    ++TPLH A +N DI
Sbjct: 39  SEGYVLLRDAIENKHTAVTKLLLTNGSKVN----------SKNKKPSNTPLHFAAINGDI 88

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           E+VK+LL++GAN +  +    RT LH A   + ++I +LL + GA  ++NV++  G+TPL
Sbjct: 89  EIVKMLLDRGAN-IDAKNQYGRTPLHNAIENKKMEITELLLNRGA--NINVRSNDGITPL 145

Query: 332 HIACRRKCLEIVKILLDKGADIN----SGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLS 387
           HIA  R+ L+IV+ LL  GA +N    S    G  PL  A+ +   EV   L++ G ++ 
Sbjct: 146 HIAAEREYLQIVEYLLKYGAYVNCVCTSTWKKGYAPLHFAVEKGSKEVITLLLSRGANVD 205

Query: 388 VP-EGERTALHMASQFGNLEMVNYLLKHININHQD--KDGWTPL--TCSIKGQASLEVFH 442
           V  E   T LH+A++ G + +   LL H    H    K+G+TPL     +  + ++++F 
Sbjct: 206 VKGEDSITPLHIAAKKGYMHIAEDLLNHGACTHSFTLKEGYTPLHFASELGNEEAVKLF- 264

Query: 443 SIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNN 501
             +  GADI A      T LH+A   G   +V  L++H   +++++  GKT ++ A++  
Sbjct: 265 --LNKGADINASTNSNLTPLHIATKTGRKTVVKLLLQHGAKVDNQDKDGKTTLHLAVEKG 322

Query: 502 HLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIE---MVSFLLSH-IGVNLQDNKGCT 557
           +L I   +LK   D+    +SN + L +A      E   +V  LL + + VN +D     
Sbjct: 323 YLMIVEDVLKYCPDI--NHQSNRSSLKIAVHGYGEEYKKIVEALLEYGLIVNPEDANNPK 380

Query: 558 PLHCAIVGNQLEVFNHLINSNADI-TMYKND-----SPLHLACATGNMDMITYAMKY-FD 610
            LH A+    L++   L+   AD+ T+Y +      +PLH A      ++    + Y  D
Sbjct: 381 LLHAAVEKGYLKIIEDLLKYGADVNTLYNSTFKEGFTPLHSAAKNKQEEVAKLLISYEAD 440

Query: 611 VNIENDIGETPLHVAVSHGCLEAVKFLL-NTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           +N ++  G+TP+  A+ +  L+  K LL N  NI      KD    L  A   K +++VE
Sbjct: 441 INAQDKTGKTPIFYAIENADLKITKLLLTNRANI------KDSPDLLNIAVKKKCIEIVE 494

Query: 670 ILLEANADVNLGD--GTYTPLYTALMK-----------DPSL----DIIKMLVKYGADVN 712
            LL+ + D+N  D  G     +TAL +           DP +    +I K+L+  GA++N
Sbjct: 495 ALLQHDTDINASDKYGRTALHFTALSESEGFFGFLTNEDPDINIKGEIAKLLLSKGANIN 554

Query: 713 LTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLK 772
              +    +T LH A+ +G    +   L  E NAD+     ++ T L+ +A   N  + K
Sbjct: 555 AQTKNG--ITTLHAAAQKGYTKVVEALL--EYNADVNSTVKSDITPLHLSAQQGNEVISK 610

Query: 773 FLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFH 832
            LL  GA+ +       + L  + ++G  E+V  LLE  A    + IK   T LH AA  
Sbjct: 611 MLLNKGANANAKQKDGITALHIATQKGHKEVVKVLLECGAKVGSK-IKSDITPLHLAAQK 669

Query: 833 NQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFE 892
              +II+ +LK+ ADIN+ D+YG+ A H A +  + ++VT LL+ GS+I   ++   T  
Sbjct: 670 GYQEIIETILKFGADINSRDEYGRTALHIASKEGHEEVVTTLLEYGSDINITSRNNHTPL 729

Query: 893 SSKVV------------------------------------EKHVAKLRAANIYV-DKNI 915
            S +V                                    ++H+ K++ AN+YV +KN+
Sbjct: 730 DSAMVGIRSFYSQLNNYDSDDDGYYDRDRGVCSCEVTAEALKRHIVKMKTANLYVSEKNL 789

Query: 916 MVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQVEFYAKNPQISNCV 975
           +   ++ +++ F +EC  E+A +K EK  +   +SFY IL+K  + +  Y ++  I   +
Sbjct: 790 LSMSISGEISGFQDECEEEIARMKSEKI-NNPNISFYGILAKGTSSLAIYMRDENIVQVL 848

Query: 976 KWKDLNLQFPIYGDVICCKFTK 997
           K  D   +FPIY  +I   F K
Sbjct: 849 KSDDYKTKFPIYASMIESHFRK 870

Source: Wolbachia endosymbiont wVitB of Nasonia vitripennis

Species: Wolbachia endosymbiont of Nasonia vitripennis

Genus: Wolbachia

Family: Anaplasmataceae

Order: Rickettsiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|390367550|ref|XP_001190300.2| PREDICTED: uncharacterized protein LOC755521 [Strongylocentrotus purpuratus]

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 220/696 (31%), Positives = 370/696 (53%), Gaps = 38/696 (5%)

Query: 242 LVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAI 301
           L+ +G  L  + +I    TPLH A  N   ++V+ L+  GA+  ++  + + T L +A++
Sbjct: 235 LIGQGADLKRANKI--GMTPLHKASANGQFDVVQFLIGHGADLKSV-STNDSTPLEMASL 291

Query: 302 VESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGC 361
              +D+ + L   GA+     +N  G TPL+ A     L++V+ L+D+GAD+N G++DG 
Sbjct: 292 KGHLDVAEFLIGQGADFKRADKN--GSTPLYAASFEGHLDVVQFLIDQGADLNRGSNDGS 349

Query: 362 TPLFCAIAQNCLEVFNYLVNHGCDL-SVPEGERTALHMASQFGNLEMVNYLL-KHININH 419
           TPL  A  +  L+V  +L+  G  L S  +  RT LH AS  G+L++V  L+ +  ++  
Sbjct: 350 TPLAIASFKGHLDVVQFLIGQGAHLNSASKDGRTPLHAASANGHLDVVQSLIGQGADVKK 409

Query: 420 QDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK 479
            DKD  TPL  ++ G   L+V   +I  GAD+K    DG T L++A + G+L +V  L+ 
Sbjct: 410 TDKDARTPLYAAL-GNGHLDVVQFLIGQGADLKRTDKDGWTPLYMASFNGHLKVVQILIS 468

Query: 480 H-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEM 538
              D+   +  G+TP++ A    HLE+   L+  GAD+        T L +A     +++
Sbjct: 469 QGADLKGADKDGRTPLHAASAIGHLEVVQFLIGQGADLNSASNDGSTPLEMASSNGHLDV 528

Query: 539 VSFLLSHIGVNLQ--DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLAC 594
           V FL+ H G +L   D  G TPL+ A +   L+V   LI   AD+     D  +PL+ A 
Sbjct: 529 VQFLICH-GADLNSVDKVGPTPLYTASLKGHLKVVQILIGQGADLKGADKDARTPLYAAS 587

Query: 595 ATGNMDMITYAM-KYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGS 653
             G+++++ + + +  D+N   + G TPL VA S+G L+ V+FL+  +  D+N  + DGS
Sbjct: 588 LNGHLEVVQFLIGQGVDLNSACNDGRTPLFVASSNGHLDIVQFLIG-QGADLNTASNDGS 646

Query: 654 TALFFACYDKRLDLVEILLEANADVNLGD-GTYTPLYTALMKDPSLDIIKMLVKYGADVN 712
           T L  A  +  LD+++ L+   AD+N  D    TPL+T+   +  LD+++ L+  G D+N
Sbjct: 647 TPLEMASLEGHLDVLQFLIGQGADLNSVDKDGMTPLFTSSF-NGHLDVVEFLIGLGVDLN 705

Query: 713 LTNEACY-YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLL 771
           +   AC    TPL  AS  G   D+ +FL+ +  AD+   + + RT L+ A+   +L++L
Sbjct: 706 I---ACNDGRTPLFVASSNGHL-DVVQFLMGQ-GADLKGVDKDGRTPLHAASANGHLEVL 760

Query: 772 KFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAF 831
           +FL+  G+D +      ++PL  +  +G  ++V  L+   AD N    K+G T L T++F
Sbjct: 761 QFLIGQGSDSNSASNDGSTPLEMASLEGHLDVVQFLIGRGADLN-SVDKYGMTPLFTSSF 819

Query: 832 HNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTF 891
           +  LD+++  +    D+N+    G+     A    + D+V FL+  G++++ A K   T 
Sbjct: 820 NGHLDVVEFFIGQGVDLNSACNDGRTPLFVASSNGHLDVVQFLIGQGADLKGADKDGRT- 878

Query: 892 ESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDF 927
                   H A   +AN ++D   +VQFL  Q  D 
Sbjct: 879 ------PLHAA---SANGHLD---VVQFLIGQGADL 902

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|390342455|ref|XP_001200090.2| PREDICTED: ankyrin-1-like [Strongylocentrotus purpuratus]

 Score =  296 bits (757), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 220/737 (29%), Positives = 382/737 (51%), Gaps = 74/737 (10%)

Query: 218  LCWALQEKKTDIAKLLVDKGVPLNLVDK-GVPLNYSRRIIETDTPLHSAILNSDIELVKL 276
            LC A Q+   D+ + LV+ G  + +  K GV            TPLH+A     +++VK 
Sbjct: 647  LCRASQKGHLDVVECLVNAGADVKIASKNGV------------TPLHAASERGHVDIVKY 694

Query: 277  LLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVA---------- 326
            L+  GANP +++     T L+  +    + +V+ L + GA+  +  +NV           
Sbjct: 695  LISVGANPNSVDI-IGYTPLYSGSQDGHLKVVECLVNAGADVKIASKNVNAGADVQIAAK 753

Query: 327  -GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385
             G+TPLH A  R  ++IVK L+ KGA+ +S N++  TPL  A  +  +++  YL++ G +
Sbjct: 754  NGVTPLHAASERGHVDIVKFLISKGANPSSVNNNSVTPLCRASQKGHVDIVKYLISKGAN 813

Query: 386  -LSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPL-TCSIKGQASLEVFH 442
              SV     T ++  SQ G+ ++V YL+    N N  D +G+TPL + S KG   L+V  
Sbjct: 814  PSSVNNDGYTPMYSGSQEGHADIVKYLISEGANPNSVDNNGYTPLFSASQKGH--LDVVE 871

Query: 443  SIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNN 501
             ++EAGAD+K    +G + LH A   G++ +V YL+ +  + NS ++ G TP+Y A +  
Sbjct: 872  CLVEAGADVKIASKNGVSPLHAASERGHVDIVKYLISRGANPNSVDNFGCTPLYRASQKG 931

Query: 502  HLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLH 560
            HL++   L+  GADV +  K+  T LH   +   +++V +L+S     N  DN G TPL+
Sbjct: 932  HLDVVECLVNAGADVKIAAKNGVTTLHATSDTGHVDIVEYLISRGANPNSVDNNGNTPLY 991

Query: 561  CAIVGNQLEVFNHLINSNADITMYKNDS--PLHLACATGNMDMITYAM-KYFDVNIENDI 617
             A +   L+V   L+N+  D+ +   +   PLH A   G++D++ Y + K  + +  N+ 
Sbjct: 992  SASLKGYLDVVEFLVNAGVDVKIASKNGVRPLHAASFRGHVDIVKYLISKGANPSSVNND 1051

Query: 618  GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
            G TP++     G L+ V+ L+N    DV   +K G   L  A +   +D+V+ L+   A+
Sbjct: 1052 GYTPMYSGSQEGHLKVVECLVNA-GADVMIASKYGVRPLHAASFRGHVDIVKYLISKGAN 1110

Query: 678  -VNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI 736
              ++ +  YTP+Y+   ++  L +++ LV  GADV + ++  Y +TPLH AS  G   DI
Sbjct: 1111 PSSVNNDGYTPMYSG-SQEGHLKVVECLVNAGADVMIASK--YGVTPLHAASITGHA-DI 1166

Query: 737  ARFLVEE--------------------------------CNADITLRNFNNRTALNFAAF 764
             ++L+ E                                  AD+ + + N  T L+ A+ 
Sbjct: 1167 VKYLISEGANPNSVDNNGYTPLCRASQKGHLDVVECLVNAGADVKMASKNGVTPLHAASE 1226

Query: 765  GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGST 824
              ++D++K+L+  GA+P+ +D    +PL ++ ++G  ++V+ L+   AD  + + K+G T
Sbjct: 1227 RGHVDIVKYLISQGANPNSVDNDGYTPLCTASQEGHLDVVECLVNAGADVKIAS-KNGVT 1285

Query: 825  ALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKA 884
             LH A+    +DI+K L+   A+ N+    G     SA Q  N+D+V  L++AG++++ A
Sbjct: 1286 PLHAASERGHVDIVKYLISQGANPNSVTNIGFTPLCSASQEGNFDVVECLVNAGADVKIA 1345

Query: 885  TKYRMTFESSKVVEKHV 901
            +K  +T   +     HV
Sbjct: 1346 SKNGVTTLHAASDRGHV 1362

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|390349089|ref|XP_792227.3| PREDICTED: uncharacterized protein LOC587405 [Strongylocentrotus purpuratus]

 Score =  296 bits (757), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 239/750 (31%), Positives = 381/750 (50%), Gaps = 76/750 (10%)

Query: 214  GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGV--PLNYS-------RRIIETD-TPLH 263
            G+  L  A QE   D+ + L++ G  +    K V  PL+ +       R+  +   TPLH
Sbjct: 477  GFTPLYSASQEGHLDVVECLLNAGAGVRKAAKNVLTPLHAASERGADMRKAAKNGLTPLH 536

Query: 264  SAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQ 323
            +A     +E+VK L+ +GANP   +     T L+ A+    +D+V+ L + GA+     +
Sbjct: 537  AASEKGHVEIVKYLISQGANPNTFDHD-GYTFLYNASQEGQLDVVECLVNAGADVRKAAK 595

Query: 324  NVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG 383
            N  GLTPLH A  +  + IVK L+ +GA+ N+ + DG TPL+ A  +  L+V   LVN G
Sbjct: 596  N--GLTPLHAASEKGHVAIVKYLISQGANPNTFDHDGYTPLYSASQEGQLDVVECLVNAG 653

Query: 384  CDLS-VPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVF 441
             DL    E   T+L+ AS+ G+++++ YL+    N N  D DG+TPL  S   +  L+V 
Sbjct: 654  ADLEKAMEKGWTSLYTASRDGHVDILEYLISQGANPNSVDNDGYTPL-YSASQEGHLDVV 712

Query: 442  HSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKN 500
              ++ AGAD+K    +G T LH A   G++A+V YL+    ++NS ++ G T +Y A + 
Sbjct: 713  ECLVNAGADVKKAANNGLTPLHAASERGHVAIVKYLISQGANLNSVDNDGYTSLYSASQK 772

Query: 501  NHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQ--DNKGCTP 558
             +L++ N L+  G D+     +  T L  A     +++V +L+S  G NL   +N G TP
Sbjct: 773  GYLDVVNYLVNEGTDLNKAANNGVTSLDTASRNGHVDIVEYLISQ-GANLNSVNNYGFTP 831

Query: 559  LHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAM-KYFDVNIEN 615
            L  A     L+V   L+N  AD+     +  +PLH A A G++ ++ Y + +  + +  +
Sbjct: 832  LSSASQEGHLDVVECLVNVGADVKKAAKNGLTPLHAASARGHVAIVKYLISQGANPHTVD 891

Query: 616  DIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEAN 675
              G  PL  A   G L+ VK L+NT   DV   + D ST L  A  +  LD+VE L+ A 
Sbjct: 892  HDGYAPLFSASQEGQLDVVKCLVNT-GADVKKGSYDVSTPLCSASQEGHLDVVECLVNAG 950

Query: 676  ADV----------------------------------NLGDGTYTPLYTALMKDPSLDII 701
            ADV                                  ++G+  YTPL+ A  K   L ++
Sbjct: 951  ADVKKAAKNDPTPLHAASVRGHVAIVKYLISEGANSNSVGNNGYTPLFIASRKG-HLGVV 1009

Query: 702  KMLVKYGADVNL-TNEACYYMTPLHYASYRGDCNDIARFLVEEC----NADITLRNFNNR 756
            + LV  GAD+N  +N+     TPL  AS+ G       F V EC     AD+     N  
Sbjct: 1010 ECLVNSGADINKGSNDGS---TPLRIASHEG------HFEVVECLVNAGADVKKAANNGV 1060

Query: 757  TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
            T+L+ A+   ++D++K+L+  GA+P+ +D    +PL S+ ++G  ++V+ LL  NA T +
Sbjct: 1061 TSLDTASRDGHVDIVKYLISQGANPNSVDNDGFTPLYSASQEGHLDVVECLL--NAGTGV 1118

Query: 817  R-TIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL 875
            R   K+G T LH A+    + I+K L+   A+ N+ D  G    ++A Q  + D+V  L+
Sbjct: 1119 RKAAKNGLTPLHAASEKGHVAIVKYLISQGANPNSVDHDGYTPLYNASQEGHLDVVECLV 1178

Query: 876  DAGSNIEKATKYRMTFESSKVVEKHVAKLR 905
             AG+ + KA K  +T       + HVA ++
Sbjct: 1179 IAGAGVRKAAKNGLTPLHVASEKGHVAIVK 1208

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|390368544|ref|XP_003731471.1| PREDICTED: uncharacterized protein LOC100890587 [Strongylocentrotus purpuratus]

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 209/654 (31%), Positives = 343/654 (52%), Gaps = 21/654 (3%)

Query: 246  GVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESV 305
            G   ++ R  I   TPL +A LN  + +V+ L+ + A+ L       RT L VA+    +
Sbjct: 583  GQKADFKRAGIGGRTPLQAASLNGHLNVVQFLVGEKAD-LNRPGIGGRTLLQVASSNGHL 641

Query: 306  DIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLF 365
            D+V+ L   GA+  +N  +  G T L +A  +  L++V+ L+ +GAD+   + DG TPLF
Sbjct: 642  DVVQFLIGQGAD--LNSSSYDGSTSLELASLKGHLDVVQFLIGQGADLKGADKDGRTPLF 699

Query: 366  CAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLL-KHININHQDKD 423
             A ++  L+V ++L++ G DL   + + RT LH AS  G+L++V +L+ +  ++   DKD
Sbjct: 700  VASSKGHLDVVHFLIDQGADLKGADKDGRTPLHAASANGHLDVVQFLIGQGADLKGADKD 759

Query: 424  GWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHID 482
            G TPL  +      L V   +I  GAD+K    DG T L+ A   G+L +V +L+ +  D
Sbjct: 760  GRTPLYAA-SANGHLYVVQFLIGQGADLKGADKDGRTPLYAASLKGHLDVVQFLIGQGAD 818

Query: 483  INSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFL 542
            +   +  G+TP+Y A    HL++   L+  GAD+    K   T L+ A     +++V FL
Sbjct: 819  LKGADKDGRTPLYAASLKGHLDVVQFLIGQGADLKGADKDGRTPLYAASFNGHLDVVQFL 878

Query: 543  LSHIGVNLQ--DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGN 598
            +   G +L+  D    TPL  A     L+V   LI+  AD+     D  +PLH A   G+
Sbjct: 879  IGQ-GADLKGADKDERTPLFVASSKGHLDVIQFLIDQGADLKGADKDGRTPLHAASLKGH 937

Query: 599  MDMITYAM-KYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALF 657
            +D++ + + +  D+   +  G TPL VA S G L+ V FL++ +  D+    KDG T L 
Sbjct: 938  LDVVQFLIGQGADLKGADKDGRTPLFVASSKGHLDVVHFLID-QGADLKGADKDGRTPLH 996

Query: 658  FACYDKRLDLVEILLEANADVNLGD-GTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNE 716
             A  +  LD+V+ L+   AD+   D    TPLY A   +  LD+++ L+  GAD+   ++
Sbjct: 997  AASANGHLDVVQFLIGQGADLKGADKDGRTPLYAA-SANGHLDVVQFLIGQGADLKGADK 1055

Query: 717  ACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK 776
                 TPL+ AS  G   D+ +FL+ +  AD+   + + RT L  A+   +LD+++FL+ 
Sbjct: 1056 DG--RTPLYAASANGHL-DVVQFLIGQ-GADLKGADKDGRTPLYAASANGHLDVVQFLIG 1111

Query: 777  AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLD 836
             GAD    D  + +PL  +  +G  ++V  L++  AD      K G T LH A+    LD
Sbjct: 1112 QGADLKGADKDERTPLFVASSKGHLDVVQFLIDQGADLK-GADKDGRTPLHAASLKGHLD 1170

Query: 837  IIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
            +++ L+   AD+   DK G+   H+     + D+V F+   G++++ A K   T
Sbjct: 1171 VVQFLIGQGADLKGADKDGRTPLHAVSLKGHLDVVQFIFGQGADLKGADKDGRT 1224

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|390343598|ref|XP_001184209.2| PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like [Strongylocentrotus purpuratus]

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 237/720 (32%), Positives = 364/720 (50%), Gaps = 77/720 (10%)

Query: 214  GYKALCWALQEKKTDIAKLLVDKGVPLN-LVDKGVPLNYSRRIIETDTPLHSAILNSDIE 272
            GY  L  A QE   D+ + L++ G  +   +DKG+            TPLH+A     +E
Sbjct: 930  GYTPLYNASQEGHLDVVECLLNAGADVEKPMDKGL------------TPLHTASGRGHVE 977

Query: 273  LVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAE--KSVNVQNVAGLTP 330
            +VK L+ +GAN  +++    +T L+ A+I   +D+V+ L + GA+  KS+++    GLTP
Sbjct: 978  IVKYLISQGANLNSVDID-GKTPLYCASINGHLDVVECLVNAGADVKKSIDI----GLTP 1032

Query: 331  LHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP- 389
            LH+A  R  ++IVK L+ +GA++NS    G TPL+ A  +  L+V   L+N G D+  P 
Sbjct: 1033 LHMASDRDHVDIVKYLISQGANLNSVYIGGKTPLYLASQEGHLDVVECLMNAGADVEKPM 1092

Query: 390  EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
            +   T LH AS  G++E+V YL+    N+N    DG TPL C+ + +  L+V   ++ AG
Sbjct: 1093 DKGWTPLHTASGRGHVEIVKYLISQGANLNSVHIDGETPLYCASQ-EGHLDVVECLVNAG 1151

Query: 449  ADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFN 507
            AD++  +  G T LH+A   G+  +V YL+    ++NS    G T +Y A +  HL++  
Sbjct: 1152 ADVEKPIDIGLTPLHMASGKGHKDIVKYLISQGANLNSVYIGGYTSLYVASQEGHLDVVE 1211

Query: 508  LLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQ--DNKGCTPLHCAIVG 565
             L+  GADV   M    T LH A     +E+V +L+S  G NL   D  G TPL+C    
Sbjct: 1212 CLINAGADVEKPMDKGLTPLHTASGRGHVEIVKYLISQ-GANLNSVDIDGETPLYCTSQE 1270

Query: 566  NQLEVFNHLINSNADI--TMYKNDSPLHLACATGNMDMITYAMK---------------- 607
              L+    L+N+ AD+   +    +PLH+A   G+ D++ Y +                 
Sbjct: 1271 GHLDAVECLVNAGADVEKPIDIGLTPLHMASGKGHEDIVKYLISQGANLNSVVIGGYTPL 1330

Query: 608  YF------------------DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKT 649
            YF                  DV    D G TPL+ A S G +E VK+L+ ++  ++N   
Sbjct: 1331 YFASEEGHLDVVECLMNAGADVEKPMDKGLTPLYTASSRGHVEIVKYLI-SQGANLNSVD 1389

Query: 650  KDGSTALFFACYDKRLDLVEILLEANADVNLG-DGTYTPLYTALMKDPSLDIIKMLVKYG 708
             DG T L++A  +  LD+VE L+ A ADV    D   TPLY A  K    DI+K L+  G
Sbjct: 1390 IDGETPLYYASQEGHLDVVECLVNAGADVKKSIDIGLTPLYMASGKGHK-DIVKYLISQG 1448

Query: 709  ADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNL 768
            A++N      Y  TPL+ AS  G   D+   LV    AD+        T L+ A+   + 
Sbjct: 1449 ANLNSVYIGGY--TPLYVASQEGHL-DVVECLVN-AGADVEKPMDKGLTPLHMASGKGHE 1504

Query: 769  DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHT 828
            D++K+L+  GA+ + +D+   SPL ++ ++G  ++V+ L+   AD N   I  G   LH 
Sbjct: 1505 DIVKYLISQGANLNSVDIGGYSPLYNASQEGHLDVVECLVNAGADVNKAAID-GDLPLHA 1563

Query: 829  AAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS------ACQAKNWDIVTFLLDAGSNIE 882
            A+    LDI+K L+   ADI A +  G            A +  + D V  LLD  ++IE
Sbjct: 1564 ASRGGYLDIMKYLITKRADIEARNALGWTTLKEVTPLMVAARGGHLDCVRLLLDNNADIE 1623

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1011
UNIPROTKB|P16157	1881	ANK1 "Ankyrin-1" [Homo sapiens	0.611	0.328	0.299	2.8e-59
ZFIN|ZDB-GENE-091113-6	1923	si:ch211-263m18.3 "si:ch211-26	0.657	0.345	0.295	3.8e-59
RGD|1309620	1864	Ank1 "ankyrin 1, erythrocytic"	0.659	0.357	0.290	6e-59
UNIPROTKB|F1M3K5	1881	Ank1 "Protein Ank1" [Rattus no	0.659	0.354	0.290	6.1e-59
UNIPROTKB|F1M651	1888	Ank1 "Protein Ank1" [Rattus no	0.659	0.353	0.290	6.1e-59
FB|FBgn0011747	1549	Ank "Ankyrin" [Drosophila mela	0.599	0.391	0.302	6.8e-59
UNIPROTKB|F1NJ80	1699	ANK3 "Uncharacterized protein"	0.662	0.394	0.292	1.1e-58
UNIPROTKB|F1NNX8	1737	ANK3 "Uncharacterized protein"	0.662	0.385	0.292	1.1e-58
UNIPROTKB|F1NNX6	1824	ANK3 "Uncharacterized protein"	0.662	0.367	0.292	1.2e-58
UNIPROTKB|F1MY81	1136	ANK1 "Uncharacterized protein"	0.649	0.578	0.278	1.3e-58

UNIPROTKB|P16157 ANK1 "Ankyrin-1" [Homo sapiens (taxid:9606)]

 Score = 641 (230.7 bits), Expect = 2.8e-59, P = 2.8e-59
 Identities = 192/642 (29%), Positives = 311/642 (48%)

Query:   262 LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVN 321
             LH A  N D     +LL+   NP  + K+   T LH+AA  E++++ +LL + GA  +  
Sbjct:   177 LHIAARNDDTRTAAVLLQNDPNPDVLSKT-GFTPLHIAAHYENLNVAQLLLNRGASVNFT 235

Query:   322 VQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN 381
              QN  G+TPLHIA RR  + +V++LLD+GA I +   D  TPL CA     + +   L++
Sbjct:   236 PQN--GITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRISEILLD 293

Query:   382 HGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLE 439
             HG  +    +   + +HMA+Q  +L+ V  LL++   I+    D  TPL  +        
Sbjct:   294 HGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHLTPLHVAAHC-GHHR 352

Query:   440 VFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAI 498
             V   +++ GA   ++ ++G T LH+AC   ++ ++  L+K    I++  + G TP++ A 
Sbjct:   353 VAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGASIDAVTESGLTPLHVAS 412

Query:   499 KNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCT 557
                HL I   LL+ GA   V      T LH+A      E+  +LL +   VN +     T
Sbjct:   413 FMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQT 472

Query:   558 PLHCAIVGNQLEVFNHLI--NSNADITMYKNDSPLHLACATGNMDMITYAM-KYFDVNIE 614
             PLHCA       +   L+  N+N ++      +PLH+A   G+++ +   + K       
Sbjct:   473 PLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACM 532

Query:   615 NDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
                G TPLHVA  +G +   + LL  ++   N   K+G T L  A +   LD+V++LL  
Sbjct:   533 TKKGFTPLHVAAKYGKVRVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR 591

Query:   675 NADVN--LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD 732
                 +    +G YTPL+ A  K   +++ + L++YG   N   E+   +TPLH A+  G 
Sbjct:   592 GGSPHSPAWNG-YTPLHIAA-KQNQVEVARSLLQYGGSANA--ESVQGVTPLHLAAQEGH 647

Query:   733 CNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPL 792
                +A  L ++ N +  L N +  T L+  A   ++ +   L+K G   D       +PL
Sbjct:   648 AEMVALLLSKQANGN--LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPL 705

Query:   793 LSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED 852
               +   G  ++V  LL++ AD N +T K G + LH AA     DI+ LLLK  A  N   
Sbjct:   706 HVASHYGNIKLVKFLLQHQADVNAKT-KLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVS 764

Query:   853 KYGKIAFHSACQA---KNWDIVTFLLDAGSNIEKATKYRMTF 891
               G      A +       D++  + D  S +  + K+RM+F
Sbjct:   765 SDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF 806

GO:0007165 "signal transduction" evidence=IEA

GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=IEA

GO:0015672 "monovalent inorganic cation transport" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0048821 "erythrocyte development" evidence=IEA

GO:0016529 "sarcoplasmic reticulum" evidence=IEA

GO:0031430 "M band" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA;NAS

GO:0005198 "structural molecule activity" evidence=NAS

GO:0007010 "cytoskeleton organization" evidence=NAS

GO:0030507 "spectrin binding" evidence=IDA;NAS;IPI

GO:0016323 "basolateral plasma membrane" evidence=NAS

GO:0008093 "cytoskeletal adaptor activity" evidence=IDA;TAS

GO:0045199 "maintenance of epithelial cell apical/basal polarity" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0019899 "enzyme binding" evidence=TAS;IPI

GO:0005856 "cytoskeleton" evidence=NAS

GO:0006887 "exocytosis" evidence=NAS

GO:0005200 "structural constituent of cytoskeleton" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

GO:0014731 "spectrin-associated cytoskeleton" evidence=IDA

GO:0051117 "ATPase binding" evidence=IPI

GO:0072661 "protein targeting to plasma membrane" evidence=IMP

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA

ZFIN|ZDB-GENE-091113-6 si:ch211-263m18.3 "si:ch211-263m18.3" [Danio rerio (taxid:7955)]

 Score = 640 (230.4 bits), Expect = 3.8e-59, P = 3.8e-59
 Identities = 210/711 (29%), Positives = 336/711 (47%)

Query:   213 QGYKALCWALQEKKTDIAKLLVDKGVPLNL-VDKG-VPL---------NYSRRIIETDT- 260
             +G+  L  A QE   ++ K L++ G   +L  + G  PL         N    +I   T 
Sbjct:   143 KGFSPLYMAAQENHLEVVKYLLEHGANQSLPTEDGFTPLAVALQQGHENVVALLINYGTK 202

Query:   261 -----P-LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDY 314
                  P LH A  N D     +LL+   NP  + K+   T LH+AA  E++ + +LL + 
Sbjct:   203 GKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKT-GFTPLHIAAHYENLSVAQLLLNR 261

Query:   315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE 374
             GA  +   +N  G+TPLHIA RR  + +V++LLD+GA I++   D  TPL CA     + 
Sbjct:   262 GANVNFTPKN--GITPLHIASRRGNVIMVRLLLDRGAQIDAKTKDELTPLHCAARNGHVR 319

Query:   375 VFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSI 432
             V   L++ G  L    +   + +HMA+Q  +++ V  LL++   I+    D  TPL  + 
Sbjct:   320 VVEILLDQGAPLQAKTKNGLSPIHMAAQGDHMDCVRQLLQYNAEIDDITLDHLTPLHVAA 379

Query:   433 KGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGK 491
                    +   +++ GA   A+ ++G T LH+AC   ++  ++ L+KH   + +  + G 
Sbjct:   380 HC-GHHRMVKVLLDKGAKANARALNGFTPLHIACKKNHMRSMDLLLKHSASLEAVTESGL 438

Query:   492 TPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLL-SHIGVNL 550
             TP++ A    HL I   LL+ GA          T LH+A      E+  FLL ++  V+ 
Sbjct:   439 TPLHVAAFMGHLNIVKSLLQRGASPNASNVKVETPLHMAARAGHCEVAQFLLQNNAQVDA 498

Query:   551 QDNKGCTPLHCAIVGNQLEVFNHLIN--SNADITMYKNDSPLHLACATGNMDMITYAMKY 608
             +     TPLHCA      E+   L+   +N D       +PLH+A   G+       +  
Sbjct:   499 KAKDDQTPLHCAARMGHKELVKLLMEHKANPDSATTAGHTPLHIAAREGHAQTTRILL-- 556

Query:   609 FDVNIENDI----GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKR 664
              D N +       G TPLHVA  +G ++ V+ LL  +  + N   K+G T L  A +   
Sbjct:   557 -DENAQQTKMTKKGFTPLHVACKYGKVDVVELLLE-RGANPNAAGKNGLTPLHVAVHHNN 614

Query:   665 LDLVEILL-EANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTP 723
             LD+V++L+ +  +  +     YT L+ A  K   L++   L++YGA+ N  +E+   +TP
Sbjct:   615 LDVVKLLVSKGGSPHSTARNGYTALHIAA-KQNQLEVASSLLQYGANAN--SESLQGITP 671

Query:   724 LHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDI 783
             LH AS  G   D+   L+ +  A++ L N N  T L+  A   ++ +   L+K GA    
Sbjct:   672 LHLASQEGQ-PDMVALLISK-QANVNLGNKNGLTPLHLVAQEGHVGIADMLVKQGASVYA 729

Query:   784 LDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK 843
                   +PL  +C  G  ++V  LL+  A  N +T + G T LH AA     DI+ LLLK
Sbjct:   730 ASRMGYTPLHVACHYGNIKMVKFLLQQQAHVNSKT-RLGYTPLHQAAQQGHTDIVTLLLK 788

Query:   844 YNADINAEDKYGKIAFHSACQAKNWDIVTFL-LDAGSNIEKAT--KYRMTF 891
             + A  N     G      A +     ++  L L    ++   T  K+RM+F
Sbjct:   789 HGALPNEITTNGTSPLGIAKRLGYISVIDVLKLVTEESVSMITTEKHRMSF 839

GO:0007165 "signal transduction" evidence=IEA

RGD|1309620 Ank1 "ankyrin 1, erythrocytic" [Rattus norvegicus (taxid:10116)]

 Score = 638 (229.6 bits), Expect = 6.0e-59, P = 6.0e-59
 Identities = 206/709 (29%), Positives = 331/709 (46%)

Query:   213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLV--DKGVPL---------NYSRRIIETDT- 260
             +G+  L  A QE   ++ K L++ G   N+   D   PL         N    +I   T 
Sbjct:   106 KGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTK 165

Query:   261 -----P-LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDY 314
                  P LH A  N D     +LL+   NP  + K+   T LH+AA  E++++ +LL + 
Sbjct:   166 GKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKT-GFTPLHIAAHYENLNVAQLLLNR 224

Query:   315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE 374
             GA  +   QN  G+TPLHIA RR  + +V++LLD+GA I +   D  TPL CA     + 
Sbjct:   225 GASVNFTPQN--GITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVR 282

Query:   375 VFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSI 432
             +   L++HG  +    +   + +HMA+Q  +L+ V  LL++   I+    D  TPL  + 
Sbjct:   283 ISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAA 342

Query:   433 KGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGK 491
                    V   +++ GA   ++ ++G T LH+AC   ++ ++  L+K    I++  + G 
Sbjct:   343 HC-GHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGL 401

Query:   492 TPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VNL 550
             TP++ A    HL I   LL+ GA   V      T LH+A      E+  +LL +    N 
Sbjct:   402 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKANA 461

Query:   551 QDNKGCTPLHCAIVGNQLEVFNHLINSNA--DITMYKNDSPLHLACATGNMDM-ITYAMK 607
             +     TPLHCA       +   L+ ++A  ++      +PLH A   G++D  +    K
Sbjct:   462 KAKDDQTPLHCAARIGHTSMVKLLLENDASPNLATTAGHTPLHTAAREGHVDTALALLEK 521

Query:   608 YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDL 667
                       G TPLHVA  +G +   + LL   +   N   K+G T L  A +   LD+
Sbjct:   522 EASQACMTKKGFTPLHVAAKYGKVRLAELLLE-HDAHPNAAGKNGLTPLHVAVHHNNLDI 580

Query:   668 VEILLEANADVN--LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLH 725
             V++LL      +    +G YTPL+ A  K   +++ + L++YG   N   E+   +TPLH
Sbjct:   581 VQLLLPRGGSPHSPAWNG-YTPLHIAA-KQNQIEVARSLLQYGGSANA--ESVQGVTPLH 636

Query:   726 YASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD 785
              A+  G    +A  L ++ N +  L N +  T L+  A   ++ +   L+K G   D   
Sbjct:   637 LAAQEGHTEMVALLLSKQANGN--LGNKSGLTPLHLVAQEGHVPVADVLIKHGVTVDATT 694

Query:   786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
                 +PL  +   G  ++V  LL++ AD N +T K G + LH AA     DI+ LLLK  
Sbjct:   695 RMGYTPLHVASHYGNIKLVKFLLQHQADVNAKT-KLGYSPLHQAAQQGHTDIVTLLLKNG 753

Query:   846 ADINAEDKYGKIAFHSACQA---KNWDIVTFLLDAGSNIEKATKYRMTF 891
             A  N     G      A +       D++  + D  S +  + K+RM++
Sbjct:   754 ASPNEVSSNGTTPLAIAKRLGYISVTDVLKVVTDETSVVLVSDKHRMSY 802

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=ISO

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0008093 "cytoskeletal adaptor activity" evidence=ISO

GO:0010638 "positive regulation of organelle organization" evidence=IMP

GO:0014731 "spectrin-associated cytoskeleton" evidence=ISO

GO:0015672 "monovalent inorganic cation transport" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016529 "sarcoplasmic reticulum" evidence=IDA

GO:0019899 "enzyme binding" evidence=ISO

GO:0030018 "Z disc" evidence=IDA

GO:0030507 "spectrin binding" evidence=ISO

GO:0030673 "axolemma" evidence=IDA

GO:0030863 "cortical cytoskeleton" evidence=ISO

GO:0031430 "M band" evidence=IDA

GO:0031672 "A band" evidence=IDA

GO:0042383 "sarcolemma" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0045211 "postsynaptic membrane" evidence=IDA

GO:0048821 "erythrocyte development" evidence=ISO

GO:0051117 "ATPase binding" evidence=ISO

GO:0072661 "protein targeting to plasma membrane" evidence=ISO

UNIPROTKB|F1M3K5 Ank1 "Protein Ank1" [Rattus norvegicus (taxid:10116)]

 Score = 638 (229.6 bits), Expect = 6.1e-59, P = 6.1e-59
 Identities = 206/709 (29%), Positives = 331/709 (46%)

Query:   213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLV--DKGVPL---------NYSRRIIETDT- 260
             +G+  L  A QE   ++ K L++ G   N+   D   PL         N    +I   T 
Sbjct:   116 KGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTK 175

Query:   261 -----P-LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDY 314
                  P LH A  N D     +LL+   NP  + K+   T LH+AA  E++++ +LL + 
Sbjct:   176 GKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKT-GFTPLHIAAHYENLNVAQLLLNR 234

Query:   315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE 374
             GA  +   QN  G+TPLHIA RR  + +V++LLD+GA I +   D  TPL CA     + 
Sbjct:   235 GASVNFTPQN--GITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVR 292

Query:   375 VFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSI 432
             +   L++HG  +    +   + +HMA+Q  +L+ V  LL++   I+    D  TPL  + 
Sbjct:   293 ISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAA 352

Query:   433 KGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGK 491
                    V   +++ GA   ++ ++G T LH+AC   ++ ++  L+K    I++  + G 
Sbjct:   353 HC-GHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGL 411

Query:   492 TPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VNL 550
             TP++ A    HL I   LL+ GA   V      T LH+A      E+  +LL +    N 
Sbjct:   412 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKANA 471

Query:   551 QDNKGCTPLHCAIVGNQLEVFNHLINSNA--DITMYKNDSPLHLACATGNMDM-ITYAMK 607
             +     TPLHCA       +   L+ ++A  ++      +PLH A   G++D  +    K
Sbjct:   472 KAKDDQTPLHCAARIGHTSMVKLLLENDASPNLATTAGHTPLHTAAREGHVDTALALLEK 531

Query:   608 YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDL 667
                       G TPLHVA  +G +   + LL   +   N   K+G T L  A +   LD+
Sbjct:   532 EASQACMTKKGFTPLHVAAKYGKVRLAELLLE-HDAHPNAAGKNGLTPLHVAVHHNNLDI 590

Query:   668 VEILLEANADVN--LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLH 725
             V++LL      +    +G YTPL+ A  K   +++ + L++YG   N   E+   +TPLH
Sbjct:   591 VQLLLPRGGSPHSPAWNG-YTPLHIAA-KQNQIEVARSLLQYGGSANA--ESVQGVTPLH 646

Query:   726 YASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD 785
              A+  G    +A  L ++ N +  L N +  T L+  A   ++ +   L+K G   D   
Sbjct:   647 LAAQEGHTEMVALLLSKQANGN--LGNKSGLTPLHLVAQEGHVPVADVLIKHGVTVDATT 704

Query:   786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
                 +PL  +   G  ++V  LL++ AD N +T K G + LH AA     DI+ LLLK  
Sbjct:   705 RMGYTPLHVASHYGNIKLVKFLLQHQADVNAKT-KLGYSPLHQAAQQGHTDIVTLLLKNG 763

Query:   846 ADINAEDKYGKIAFHSACQA---KNWDIVTFLLDAGSNIEKATKYRMTF 891
             A  N     G      A +       D++  + D  S +  + K+RM++
Sbjct:   764 ASPNEVSSNGTTPLAIAKRLGYISVTDVLKVVTDETSVVLVSDKHRMSY 812

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1M651 Ank1 "Protein Ank1" [Rattus norvegicus (taxid:10116)]

 Score = 638 (229.6 bits), Expect = 6.1e-59, P = 6.1e-59
 Identities = 206/709 (29%), Positives = 331/709 (46%)

Query:   213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLV--DKGVPL---------NYSRRIIETDT- 260
             +G+  L  A QE   ++ K L++ G   N+   D   PL         N    +I   T 
Sbjct:   106 KGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTK 165

Query:   261 -----P-LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDY 314
                  P LH A  N D     +LL+   NP  + K+   T LH+AA  E++++ +LL + 
Sbjct:   166 GKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKT-GFTPLHIAAHYENLNVAQLLLNR 224

Query:   315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE 374
             GA  +   QN  G+TPLHIA RR  + +V++LLD+GA I +   D  TPL CA     + 
Sbjct:   225 GASVNFTPQN--GITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVR 282

Query:   375 VFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSI 432
             +   L++HG  +    +   + +HMA+Q  +L+ V  LL++   I+    D  TPL  + 
Sbjct:   283 ISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAA 342

Query:   433 KGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGK 491
                    V   +++ GA   ++ ++G T LH+AC   ++ ++  L+K    I++  + G 
Sbjct:   343 HC-GHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGL 401

Query:   492 TPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VNL 550
             TP++ A    HL I   LL+ GA   V      T LH+A      E+  +LL +    N 
Sbjct:   402 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKANA 461

Query:   551 QDNKGCTPLHCAIVGNQLEVFNHLINSNA--DITMYKNDSPLHLACATGNMDM-ITYAMK 607
             +     TPLHCA       +   L+ ++A  ++      +PLH A   G++D  +    K
Sbjct:   462 KAKDDQTPLHCAARIGHTSMVKLLLENDASPNLATTAGHTPLHTAAREGHVDTALALLEK 521

Query:   608 YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDL 667
                       G TPLHVA  +G +   + LL   +   N   K+G T L  A +   LD+
Sbjct:   522 EASQACMTKKGFTPLHVAAKYGKVRLAELLLE-HDAHPNAAGKNGLTPLHVAVHHNNLDI 580

Query:   668 VEILLEANADVN--LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLH 725
             V++LL      +    +G YTPL+ A  K   +++ + L++YG   N   E+   +TPLH
Sbjct:   581 VQLLLPRGGSPHSPAWNG-YTPLHIAA-KQNQIEVARSLLQYGGSANA--ESVQGVTPLH 636

Query:   726 YASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD 785
              A+  G    +A  L ++ N +  L N +  T L+  A   ++ +   L+K G   D   
Sbjct:   637 LAAQEGHTEMVALLLSKQANGN--LGNKSGLTPLHLVAQEGHVPVADVLIKHGVTVDATT 694

Query:   786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
                 +PL  +   G  ++V  LL++ AD N +T K G + LH AA     DI+ LLLK  
Sbjct:   695 RMGYTPLHVASHYGNIKLVKFLLQHQADVNAKT-KLGYSPLHQAAQQGHTDIVTLLLKNG 753

Query:   846 ADINAEDKYGKIAFHSACQA---KNWDIVTFLLDAGSNIEKATKYRMTF 891
             A  N     G      A +       D++  + D  S +  + K+RM++
Sbjct:   754 ASPNEVSSNGTTPLAIAKRLGYISVTDVLKVVTDETSVVLVSDKHRMSY 802

GO:0007165 "signal transduction" evidence=IEA

FB|FBgn0011747 Ank "Ankyrin" [Drosophila melanogaster (taxid:7227)]

 Score = 636 (228.9 bits), Expect = 6.8e-59, P = 6.8e-59
 Identities = 193/639 (30%), Positives = 326/639 (51%)

Query:   260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             TPL  A+     ++V +LLE         K R   ALH+AA    V+  KLL  +  + +
Sbjct:   174 TPLAVAMQQGHDKIVAVLLENDVRG----KVR-LPALHIAAKKNDVNAAKLLLQH--DPN 226

Query:   320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
              ++ + +G TPLHIA     ++I  +LL+  AD+N       TPL  A     L +   L
Sbjct:   227 ADIVSKSGFTPLHIAAHYGNVDIATLLLNNKADVNYVAKHNITPLHVACKWGKLSLCTLL 286

Query:   380 VNHGC--DLSVPEGERTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQA 436
             +  G   D +  +G  T LH AS+ G++E++ +LL+ +  I  + K+G + L  + +G+ 
Sbjct:   287 LCRGAKIDAATRDG-LTPLHCASRSGHVEVIKHLLQQNAPILTKTKNGLSALHMAAQGEH 345

Query:   437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIY 495
               E  H +++  A +    +D  TALH+A + G++ +   L+ +  + N+    G TP++
Sbjct:   346 D-EAAHLLLDNKAPVDEVTVDYLTALHVAAHCGHVKVAKLLLDYKANPNARALNGFTPLH 404

Query:   496 FAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNK 554
              A K N +++  LL+K GA++    +S  T LHVA     I +V +LL H    +L   +
Sbjct:   405 IACKKNRIKMVELLIKHGANIGATTESGLTPLHVASFMGCINIVIYLLQHEASADLPTIR 464

Query:   555 GCTPLHCAIVGNQLEVFNHLINS-NADITMYKNDSPLHLACATGNMDMITYAMKY-FDVN 612
             G TPLH A   NQ ++   L+ S   D    +  +PLH+A   GN+++I   +++  ++N
Sbjct:   465 GETPLHLAARANQADIIRILLRSAKVDAIAREGQTPLHVASRLGNINIIMLLLQHGAEIN 524

Query:   613 IENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFAC-YDKRLDLVEIL 671
              +++   + LH+A   G    V+ LL     + N  TK G T L  AC Y K+ ++V+IL
Sbjct:   525 AQSNDKYSALHIAAKEGQENIVQVLLEN-GAENNAVTKKGFTPLHLACKYGKQ-NVVQIL 582

Query:   672 LEANADVNL-GDGTYTPLYTAL-MKDPSLDIIKMLVKYGADVNLT--NEACYYMTPLHYA 727
             L+  A ++  G    TPL+ A    +PS  I+++L+K G+  NL   N  C     +H A
Sbjct:   583 LQNGASIDFQGKNDVTPLHVATHYNNPS--IVELLLKNGSSPNLCARNGQC----AIHIA 636

Query:   728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
               +    +IA  L++   AD+ + + +  + L+ AA G N+D+++ LL+ G         
Sbjct:   637 CKKNYL-EIAMQLLQH-GADVNIISKSGFSPLHLAAQGGNVDMVQLLLEYGVISAAAK-N 693

Query:   788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
               +PL  + ++G   +   LLE+ A+ + RT ++G T LH AA +  LD++K  ++ +AD
Sbjct:   694 GLTPLHVAAQEGHVLVSQILLEHGANISERT-RNGYTPLHMAAHYGHLDLVKFFIENDAD 752

Query:   848 INAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886
             I      G    H A Q  +  I+  LL   +N    TK
Sbjct:   753 IEMSSNIGYTPLHQAAQQGHIMIINLLLRHKANPNALTK 791

GO:0045170 "spectrosome" evidence=IDA;TAS

GO:0045169 "fusome" evidence=NAS;IDA

GO:0007016 "cytoskeletal anchoring at plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0008092 "cytoskeletal protein binding" evidence=ISS

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NJ80 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 635 (228.6 bits), Expect = 1.1e-58, P = 1.1e-58
 Identities = 210/719 (29%), Positives = 339/719 (47%)

Query:   210 SHSQ-GYKALCWALQEKKTDIAKLLVDKGVPLNLV--DKGVPLNYSRR---------IIE 257
             + SQ G+  L  A QE   ++ K L+D G   +L   D   PL  + +         ++E
Sbjct:    93 AQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLE 152

Query:   258 TDT------P-LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKL 310
              DT      P LH A    D +   LLL+   N   +E     T LH+AA   ++++  L
Sbjct:   153 NDTKGKVRLPALHIAARKDDTKAAALLLQNDHNA-DVESKSGFTPLHIAAHYGNINVATL 211

Query:   311 LFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ 370
             L + GA      +N   +TPLH+A +R    +VK+LLD+GA I++   DG TPL C    
Sbjct:   212 LLNRGAAVDFTARN--DITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARS 269

Query:   371 NCLEVFNYLVNHGCD-LSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPL 428
                +V   L++ G   LS  +   + LHMA+Q  +L  V  L++H + ++    D  T L
Sbjct:   270 GHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTNDYLTAL 329

Query:   429 TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSEN 487
               +       +V   +++  A+  AK ++G T LH+AC    + ++  L+KH   I +  
Sbjct:   330 HVAAHC-GHYKVAKVLLDKKANPNAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVT 388

Query:   488 DLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-I 546
             + G TPI+ A    H+ I + L+  GA          T LH+A      E+V +L+ +  
Sbjct:   389 ESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARAGQTEVVRYLVQNGA 448

Query:   547 GVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNA--DITMYKNDSPLHLACATGNMDMITY 604
              V  +     TPLH +    + ++   L+   A  +       +PLHL+   G+ D+ + 
Sbjct:   449 QVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVASV 508

Query:   605 AMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK 663
              +++   + I    G TPLHVA  +G +E    LL  KN   +   K G T L  A +  
Sbjct:   509 LLEHGASLAIITKKGFTPLHVAAKYGKIEVANLLLQ-KNASPDASGKSGLTPLHVAAHYD 567

Query:   664 RLDLVEILLEANADVNLG-DGTYTPLYTALMKDPSLDIIKMLVKYGADVN-LTNEACYYM 721
                +  +LL+  A  +      YTPL+ A  K+  +DI   L++YGAD N +T +    +
Sbjct:   568 NQKVALLLLDQGASPHASAKNGYTPLHIAAKKN-QMDIATTLLEYGADANAVTRQG---I 623

Query:   722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
              P+H AS  G  + ++  L    NA++ L N +  T L+ AA  + +++ + L+  GA  
Sbjct:   624 APVHLASQDGHVDMVSLLLTR--NANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAAV 681

Query:   782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
             D       +PL   C  G  +IV+ LL+++A  N +T K+G T LH AA      II +L
Sbjct:   682 DAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKINAKT-KNGYTPLHQAAQQGHTHIINVL 740

Query:   842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKH 900
             L++ A  N     G  A      AK    ++ ++D    ++  T+  MT  +  V EKH
Sbjct:   741 LQHGAAPNELTVNGNTAL---AIAKRLGYIS-VVDT---LKVVTEETMT--TITVTEKH 790

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX8 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 635 (228.6 bits), Expect = 1.1e-58, P = 1.1e-58
 Identities = 210/719 (29%), Positives = 339/719 (47%)

Query:   210 SHSQ-GYKALCWALQEKKTDIAKLLVDKGVPLNLV--DKGVPLNYSRR---------IIE 257
             + SQ G+  L  A QE   ++ K L+D G   +L   D   PL  + +         ++E
Sbjct:    93 AQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLE 152

Query:   258 TDT------P-LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKL 310
              DT      P LH A    D +   LLL+   N   +E     T LH+AA   ++++  L
Sbjct:   153 NDTKGKVRLPALHIAARKDDTKAAALLLQNDHNA-DVESKSGFTPLHIAAHYGNINVATL 211

Query:   311 LFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ 370
             L + GA      +N   +TPLH+A +R    +VK+LLD+GA I++   DG TPL C    
Sbjct:   212 LLNRGAAVDFTARN--DITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARS 269

Query:   371 NCLEVFNYLVNHGCD-LSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPL 428
                +V   L++ G   LS  +   + LHMA+Q  +L  V  L++H + ++    D  T L
Sbjct:   270 GHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTNDYLTAL 329

Query:   429 TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSEN 487
               +       +V   +++  A+  AK ++G T LH+AC    + ++  L+KH   I +  
Sbjct:   330 HVAAHC-GHYKVAKVLLDKKANPNAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVT 388

Query:   488 DLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-I 546
             + G TPI+ A    H+ I + L+  GA          T LH+A      E+V +L+ +  
Sbjct:   389 ESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARAGQTEVVRYLVQNGA 448

Query:   547 GVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNA--DITMYKNDSPLHLACATGNMDMITY 604
              V  +     TPLH +    + ++   L+   A  +       +PLHL+   G+ D+ + 
Sbjct:   449 QVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVASV 508

Query:   605 AMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK 663
              +++   + I    G TPLHVA  +G +E    LL  KN   +   K G T L  A +  
Sbjct:   509 LLEHGASLAIITKKGFTPLHVAAKYGKIEVANLLLQ-KNASPDASGKSGLTPLHVAAHYD 567

Query:   664 RLDLVEILLEANADVNLG-DGTYTPLYTALMKDPSLDIIKMLVKYGADVN-LTNEACYYM 721
                +  +LL+  A  +      YTPL+ A  K+  +DI   L++YGAD N +T +    +
Sbjct:   568 NQKVALLLLDQGASPHASAKNGYTPLHIAAKKN-QMDIATTLLEYGADANAVTRQG---I 623

Query:   722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
              P+H AS  G  + ++  L    NA++ L N +  T L+ AA  + +++ + L+  GA  
Sbjct:   624 APVHLASQDGHVDMVSLLLTR--NANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAAV 681

Query:   782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
             D       +PL   C  G  +IV+ LL+++A  N +T K+G T LH AA      II +L
Sbjct:   682 DAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKINAKT-KNGYTPLHQAAQQGHTHIINVL 740

Query:   842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKH 900
             L++ A  N     G  A      AK    ++ ++D    ++  T+  MT  +  V EKH
Sbjct:   741 LQHGAAPNELTVNGNTAL---AIAKRLGYIS-VVDT---LKVVTEETMT--TITVTEKH 790

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX6 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 635 (228.6 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 210/719 (29%), Positives = 339/719 (47%)

Query:   210 SHSQ-GYKALCWALQEKKTDIAKLLVDKGVPLNLV--DKGVPLNYSRR---------IIE 257
             + SQ G+  L  A QE   ++ K L+D G   +L   D   PL  + +         ++E
Sbjct:    93 AQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLE 152

Query:   258 TDT------P-LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKL 310
              DT      P LH A    D +   LLL+   N   +E     T LH+AA   ++++  L
Sbjct:   153 NDTKGKVRLPALHIAARKDDTKAAALLLQNDHNA-DVESKSGFTPLHIAAHYGNINVATL 211

Query:   311 LFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ 370
             L + GA      +N   +TPLH+A +R    +VK+LLD+GA I++   DG TPL C    
Sbjct:   212 LLNRGAAVDFTARN--DITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARS 269

Query:   371 NCLEVFNYLVNHGCD-LSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPL 428
                +V   L++ G   LS  +   + LHMA+Q  +L  V  L++H + ++    D  T L
Sbjct:   270 GHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTNDYLTAL 329

Query:   429 TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSEN 487
               +       +V   +++  A+  AK ++G T LH+AC    + ++  L+KH   I +  
Sbjct:   330 HVAAHC-GHYKVAKVLLDKKANPNAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVT 388

Query:   488 DLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-I 546
             + G TPI+ A    H+ I + L+  GA          T LH+A      E+V +L+ +  
Sbjct:   389 ESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARAGQTEVVRYLVQNGA 448

Query:   547 GVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNA--DITMYKNDSPLHLACATGNMDMITY 604
              V  +     TPLH +    + ++   L+   A  +       +PLHL+   G+ D+ + 
Sbjct:   449 QVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVASV 508

Query:   605 AMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK 663
              +++   + I    G TPLHVA  +G +E    LL  KN   +   K G T L  A +  
Sbjct:   509 LLEHGASLAIITKKGFTPLHVAAKYGKIEVANLLLQ-KNASPDASGKSGLTPLHVAAHYD 567

Query:   664 RLDLVEILLEANADVNLG-DGTYTPLYTALMKDPSLDIIKMLVKYGADVN-LTNEACYYM 721
                +  +LL+  A  +      YTPL+ A  K+  +DI   L++YGAD N +T +    +
Sbjct:   568 NQKVALLLLDQGASPHASAKNGYTPLHIAAKKN-QMDIATTLLEYGADANAVTRQG---I 623

Query:   722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
              P+H AS  G  + ++  L    NA++ L N +  T L+ AA  + +++ + L+  GA  
Sbjct:   624 APVHLASQDGHVDMVSLLLTR--NANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAAV 681

Query:   782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
             D       +PL   C  G  +IV+ LL+++A  N +T K+G T LH AA      II +L
Sbjct:   682 DAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKINAKT-KNGYTPLHQAAQQGHTHIINVL 740

Query:   842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKH 900
             L++ A  N     G  A      AK    ++ ++D    ++  T+  MT  +  V EKH
Sbjct:   741 LQHGAAPNELTVNGNTAL---AIAKRLGYIS-VVDT---LKVVTEETMT--TITVTEKH 790

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1MY81 ANK1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 630 (226.8 bits), Expect = 1.3e-58, P = 1.3e-58
 Identities = 191/687 (27%), Positives = 327/687 (47%)

Query:   260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRT-ALHVAAIVESVDIVKLLFDYGAEK 318
             TPL  A+      +V  L+  G       K + R  ALH+AA  +      +L     + 
Sbjct:   145 TPLAVALQQGHENVVAHLINYGT------KGKVRLPALHIAARNDDTRTAAVLLQN--DP 196

Query:   319 SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNY 378
             + +V +  G TPLHIA   + L + ++LL++GA +N    +G TPL  A  +  + +   
Sbjct:   197 NPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRL 256

Query:   379 LVNHGCDLSV-PEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQA 436
             L++ G  +    + E T LH A++ G+L +   LL H   I  + K+G +P+  + +G  
Sbjct:   257 LLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPIQAKTKNGLSPIHMAAQGD- 315

Query:   437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIY 495
              L+    +++  A+I    +D  T LH+A + G+  +   L+ K    NS    G TP++
Sbjct:   316 HLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLH 375

Query:   496 FAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNK 554
              A K NH+ +  LLLK+GA +    +S  T LHVA     + +V  LL      N+ + K
Sbjct:   376 IACKKNHIRVMELLLKMGASIDAVTESGLTPLHVASFMGHLPIVKSLLQREASPNVSNVK 435

Query:   555 GCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAMKY-FDV 611
               TPLH A      EV  +L+ + A +     D  +PLH A   G+ +M+   ++   + 
Sbjct:   436 VETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANP 495

Query:   612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
             N+    G TPLH+A   G +E    LL  K       TK G T L  A    ++ + E+L
Sbjct:   496 NLATTAGHTPLHIAAREGHVETALALLE-KEASQTCMTKKGFTPLHVAAKYGKVRMAELL 554

Query:   672 LEANADVNL-GDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYR 730
             LE +A  N  G    TPL+ A+  +  LD++++L+  G   +  + A    TPLH A+ +
Sbjct:   555 LEHDAHPNAAGKSGLTPLHVAVHHN-HLDVVRLLLPRGGSPH--SPALNGYTPLHIAAKQ 611

Query:   731 GDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTS 790
                 ++AR L++         +    T L+ AA   + +++  LL   A+ ++ +    +
Sbjct:   612 NQL-EVARSLLQY-GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLT 669

Query:   791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINA 850
             PL    ++G   + D L+++    +  T + G T LH A+ +  + ++K LL++ AD+NA
Sbjct:   670 PLHLVAQEGHIPVADVLIKHGVTVDATT-RMGYTPLHVASHYGNIKLVKFLLQHKADVNA 728

Query:   851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIY 910
             + K G    H A Q  + DIVT LL  G++  + +    T      + K +  +   ++ 
Sbjct:   729 KTKLGYSPLHQAAQQGHTDIVTLLLKHGASPNEVSSNGTT---PLAIAKRLGYISVTDVL 785

Query:   911 --VDKNIMVQFLTTQVNDFYEECLREV 935
               V     VQ +T +    + E + E+
Sbjct:   786 KVVTDETTVQLITDKHRMSFPETVDEI 812

GO:0072661 "protein targeting to plasma membrane" evidence=IEA

GO:0051117 "ATPase binding" evidence=IEA

GO:0048821 "erythrocyte development" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0030507 "spectrin binding" evidence=IEA

GO:0015672 "monovalent inorganic cation transport" evidence=IEA

GO:0014731 "spectrin-associated cytoskeleton" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	1011
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-31
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-30
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-29
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-29
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	7e-29
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	8e-29
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-28
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-28
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-27
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-27
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	5e-26
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	8e-26
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-25
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-25
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-24
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-24
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	9e-23
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-22
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-22
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-22
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	8e-21
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-20
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-20
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	1e-20
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-20
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	8e-20
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-19
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	5e-19
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	6e-19
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	8e-19
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-18
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	5e-18
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	5e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	6e-18
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-17
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	9e-17
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-16
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	4e-16
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	1e-15
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-15
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	5e-15
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	6e-15
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-14
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	3e-14
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-14
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	4e-14
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-14
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	8e-14
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-13
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-13
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	3e-13
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	4e-13
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	4e-13
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	5e-13
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	7e-13
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-12
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	1e-12
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	4e-12
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	2e-11
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	2e-11
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	3e-11
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	6e-11
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-10
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	4e-10
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	6e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	9e-10
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	1e-09
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	1e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-09
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	2e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-09
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	3e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-09
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	4e-09
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-09
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-08
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	3e-08
pfam00023	33	pfam00023, Ank, Ankyrin repeat	3e-08
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	4e-08
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	6e-08
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-08
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-08
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	9e-08
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-07
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	2e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	4e-07
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	5e-07
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	7e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	9e-07
PHA02716	764	PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provi	9e-07
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	1e-06
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	2e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	4e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-06
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	5e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	7e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-05
PHA02736	154	PHA02736, PHA02736, Viral ankyrin protein; Provisi	1e-05
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	2e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-05
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	2e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-05
smart00248	30	smart00248, ANK, ankyrin repeats	2e-05
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	4e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	5e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	5e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	6e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	6e-05
smart00248	30	smart00248, ANK, ankyrin repeats	7e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	9e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	9e-05
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	1e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-04
PHA02716	764	PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provi	1e-04
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	1e-04
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	1e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	2e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-04
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	2e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	3e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	3e-04
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	3e-04
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	3e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	5e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	6e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	6e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	8e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	8e-04
PHA02736	154	PHA02736, PHA02736, Viral ankyrin protein; Provisi	8e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.001
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	0.001
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	0.001
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.001
PHA02741	169	PHA02741, PHA02741, hypothetical protein; Provisio	0.001
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	0.002
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.002
smart00248	30	smart00248, ANK, ankyrin repeats	0.002
PHA02884	300	PHA02884, PHA02884, ankyrin repeat protein; Provis	0.002
PHA02743	166	PHA02743, PHA02743, Viral ankyrin protein; Provisi	0.002
PHA02917	661	PHA02917, PHA02917, ankyrin-like protein; Provisio	0.002
PHA02884	300	PHA02884, PHA02884, ankyrin repeat protein; Provis	0.003
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	0.004
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.004
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	0.004

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  128 bits (325), Expect = 2e-31
 Identities = 81/299 (27%), Positives = 128/299 (42%), Gaps = 48/299 (16%)

Query: 241 NLVDKGVPLNYSRRIIETDTPLHSAILNS---DIELVKLLLEKGANPLAIEKSRNRTALH 297
            L+  G  +N+        TPLH  +  S     ++V+LLLE GA+  A E+    T LH
Sbjct: 32  RLLAAGADVNFRGEY--GKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERC-GFTPLH 88

Query: 298 VAAIVESV-DIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCL--EIVKILLDKGADIN 354
           +     +  D++KLL   GA   VN ++  G TPLH+      +  +++++LL KGAD+N
Sbjct: 89  LYLYNATTLDVIKLLIKAGA--DVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN 146

Query: 355 SGNDDGCTPLFCAIAQN--CLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYL 411
           + +  G TPL   +      +E+   L++ G D+   +   R+ LH              
Sbjct: 147 ALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLH---HHLQ------- 196

Query: 412 LKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFG-- 469
                              S K +A   +   +I AG D  A  M G T LH        
Sbjct: 197 -------------------SFKPRAR--IVRELIRAGCDPAATDMLGNTPLHSMATGSSC 235

Query: 470 -NLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCL 527
               ++  L+  I IN+ N  G+TP+++A   N+      L+ LGAD+        T L
Sbjct: 236 KRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPL 294

Length = 471

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  115 bits (291), Expect = 3e-30
 Identities = 55/121 (45%), Positives = 80/121 (66%), Gaps = 3/121 (2%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
           RT LH+AA    +++VKLL + GA   VN ++  G TPLH+A +   LEIVK+LL+KGAD
Sbjct: 8   RTPLHLAASNGHLEVVKLLLENGA--DVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD 65

Query: 353 INSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYL 411
           +N+ + DG TPL  A     L+V   L+ HG D++  + + RT LH+A++ G+LE+V  L
Sbjct: 66  VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125

Query: 412 L 412
           L
Sbjct: 126 L 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  112 bits (281), Expect = 5e-29
 Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 2/115 (1%)

Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
           N ++  G TPLH+A     LE+VK+LL+ GAD+N+ ++DG TPL  A     LE+   L+
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 381 NHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIK 433
             G D++   +   T LH+A++ GNL++V  LLKH  ++N +DKDG TPL  + K
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAK 115

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  112 bits (281), Expect = 5e-29
 Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 2/121 (1%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           DG T LHLA   G+L +V  L+++  D+N++++ G+TP++ A KN HLEI  LLL+ GAD
Sbjct: 6   DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD 65

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHL 574
           V  + K   T LH+A    ++++V  LL H   VN +D  G TPLH A     LEV   L
Sbjct: 66  VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125

Query: 575 I 575
           +
Sbjct: 126 L 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  121 bits (305), Expect = 7e-29
 Identities = 99/411 (24%), Positives = 167/411 (40%), Gaps = 45/411 (10%)

Query: 610 DVNIENDIGETPLHVAV---SHGCLEAVKFLLNTKNIDVNHKTKDGSTALF-FACYDKRL 665
           DVN   + G+TPLH+ +   S    + V+ LL     DVN   + G T L  +      L
Sbjct: 39  DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLE-AGADVNAPERCGFTPLHLYLYNATTL 97

Query: 666 DLVEILLEANADVNLGDG-TYTPLYTALMKDPSLD--IIKMLVKYGADVNLTNEACYYMT 722
           D++++L++A ADVN  D    TPL+  L    +++  +I++L++ GADVN  +   Y MT
Sbjct: 98  DVIKLLIKAGADVNAKDKVGRTPLHVYL-SGFNINPKVIRLLLRKGADVNALD--LYGMT 154

Query: 723 PLHYASYRGDCN-DIARFLVEECNADITLRNFNNRTALNFAA--FGNNLDLLKFLLKAGA 779
           PL       + N ++ R L++   AD+   +   R+ L+     F     +++ L++AG 
Sbjct: 155 PLAVLLKSRNANVELLRLLIDA-GADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGC 213

Query: 780 DPDILDLKDTSPL-----LSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQ 834
           DP   D+   +PL      SSC++ L   V  LL      N R  ++G T LH AA  N 
Sbjct: 214 DPAATDMLGNTPLHSMATGSSCKRSL---VLPLLIAGISINARN-RYGQTPLHYAAVFNN 269

Query: 835 LDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN---IEKATKYRMTF 891
               + L+   ADINA    G        +  N   V   L    +   +          
Sbjct: 270 PRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVAATLNTASVA 329

Query: 892 ESSKVVEKHVAKLRAANIY----VDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQE 947
                 +     +    +     +    +  +      DF  EC  E+A+++  + G   
Sbjct: 330 GGDIPSDATRLCVAKVVLRGAFSLLPEPIRAYHA----DFIRECEAEIAVMRTTRIGTG- 384

Query: 948 KVSFYDILSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKV 998
            VS  DIL      +   +                +  +YG  +  +  ++
Sbjct: 385 -VSLLDILFARNPDILLVSNASLRKKA--------RLTVYGKALRARIEEM 426

Length = 471

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  120 bits (304), Expect = 8e-29
 Identities = 86/318 (27%), Positives = 133/318 (41%), Gaps = 46/318 (14%)

Query: 304 SVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRR---KCLEIVKILLDKGADINSGNDDG 360
           +V+ V+ L   GA   VN +   G TPLH+       K  +IV++LL+ GAD+N+    G
Sbjct: 26  TVEEVRRLLAAGA--DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCG 83

Query: 361 CTPLFCAI-AQNCLEVFNYLVNHGCDLSVPEG-ERTALH--MASQFGNLEMVNYLLKH-I 415
            TPL   +     L+V   L+  G D++  +   RT LH  ++    N +++  LL+   
Sbjct: 84  FTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGA 143

Query: 416 NINHQDKDGWTPLTCSIK-GQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMV 474
           ++N  D  G TPL   +K   A++E+   +I+AGAD+ A      + LH           
Sbjct: 144 DVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHL-------- 195

Query: 475 NYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFA 534
                   I  E                      L++ G D A       T LH     +
Sbjct: 196 QSFKPRARIVRE----------------------LIRAGCDPAATDMLGNTPLHSMATGS 233

Query: 535 S---IEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SP 589
           S     ++  L++ I +N ++  G TPLH A V N       LI   ADI    +D  +P
Sbjct: 234 SCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTP 293

Query: 590 LHLACATGNMDMITYAMK 607
           L L     N   +  A+ 
Sbjct: 294 LSLMVRNNNGRAVRAALA 311

Length = 471

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  110 bits (278), Expect = 1e-28
 Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 1/125 (0%)

Query: 751 RNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEY 810
           R+ + RT L+ AA   +L+++K LL+ GAD +  D    +PL  + + G  EIV  LLE 
Sbjct: 3   RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEK 62

Query: 811 NADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDI 870
            AD N R  K G+T LH AA +  LD++KLLLK+ AD+NA DK G+   H A +  + ++
Sbjct: 63  GADVNARD-KDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEV 121

Query: 871 VTFLL 875
           V  LL
Sbjct: 122 VKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  110 bits (277), Expect = 2e-28
 Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 3/124 (2%)

Query: 484 NSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLL 543
           N+ ++ G+TP++ A  N HLE+  LLL+ GADV  K     T LH+A +   +E+V  LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 544 SH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITM--YKNDSPLHLACATGNMD 600
                VN +D  G TPLH A     L+V   L+   AD+        +PLHLA   G+++
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLE 120

Query: 601 MITY 604
           ++  
Sbjct: 121 VVKL 124

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score =  119 bits (300), Expect = 1e-27
 Identities = 112/359 (31%), Positives = 166/359 (46%), Gaps = 46/359 (12%)

Query: 498 IKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGC 556
           I+ + L I  +LL+ GADV  K     T +H A E  + +MV+ LLS+   VN+      
Sbjct: 153 IQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDL 212

Query: 557 TPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKY---FDVNI 613
           + L CA+    ++    +I++ ++I   KND  L L  A  N D+ T  + Y   F VN 
Sbjct: 213 SVLECAVDSKNIDTIKAIIDNRSNIN--KND--LSLLKAIRNEDLETSLLLYDAGFSVNS 268

Query: 614 ENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE 673
            +D   TPLH A     L  +   L  +  DVN K   G T                   
Sbjct: 269 IDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGET------------------- 309

Query: 674 ANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDC 733
                        PLY         + I+ L+  GADVN  +    Y+TPLH AS     
Sbjct: 310 -------------PLYLMAKNGYDTENIRTLIMLGADVNAADR--LYITPLHQASTLDRN 354

Query: 734 NDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPL- 792
            DI   L+E   A++  R++ ++T +++AA  NN+ ++  LL  GAD + L  K  + L 
Sbjct: 355 KDIVITLLE-LGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALH 413

Query: 793 LSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHN-QLDIIKLLLKYNADINA 850
            + C    Y  V TL++  A+ N +  K  ST LH A   N +LD+I++LL   AD+NA
Sbjct: 414 FALCGTNPYMSVKTLIDRGANVNSKN-KDLSTPLHYACKKNCKLDVIEMLLDNGADVNA 471

Length = 682

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  106 bits (267), Expect = 4e-27
 Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 3/120 (2%)

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
           RT LH+A+  G+LE+V  LL++  ++N +D DG TPL  + K    LE+   ++E GAD+
Sbjct: 8   RTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAK-NGHLEIVKLLLEKGADV 66

Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
            A+  DG T LHLA   GNL +V  L+KH  D+N+ +  G+TP++ A KN HLE+  LLL
Sbjct: 67  NARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score =  112 bits (281), Expect = 5e-26
 Identities = 100/407 (24%), Positives = 160/407 (39%), Gaps = 90/407 (22%)

Query: 620  TPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKR-----LDLVEILLEA 674
             PL++A     ++ VK LL+    D+N  TK+ ST L +    K       ++V++LLE 
Sbjct: 37   LPLYLAKEARNIDVVKILLDN-GADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEY 95

Query: 675  NADVNLGD-GTYTPLYTALMKDP-SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD 732
             A+VN  D    TPL  A+ K   S  I++ L+  GA+VN+ N        LH      +
Sbjct: 96   GANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKN--SDGENLLHLYL---E 150

Query: 733  CNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPL 792
             N I                              +L +LK L+  G D +  +       
Sbjct: 151  SNKI------------------------------DLKILKLLIDKGVDINAKN------- 173

Query: 793  LSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED 852
                       V+ LL Y    N++ +  G T LH A ++N  + +K LL   A+ N  +
Sbjct: 174  ----------RVNYLLSYGVPINIKDVY-GFTPLHYAVYNNNPEFVKYLLDLGANPNLVN 222

Query: 853  KYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFE--------SSKVVEKHV--A 902
            KYG    H A    N +I   LL+ G +I+   +  + F+          K+++K +   
Sbjct: 223  KYGDTPLHIAILNNNKEIFKLLLNNGPSIKTIIETLLYFKDKDLNTITKIKMLKKSIMYM 282

Query: 903  KLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQV 962
             L     Y ++ ++       + D   EC +E+  +K  K     KV+ YDI+       
Sbjct: 283  FLLDPGFYKNRKLIENS--KSLKDVINECEKEIERMKEIK---LNKVTVYDII------- 330

Query: 963  EFYAKNPQISNCVKWKDLN--LQFPIYGDVICCKFTKVLNSLKNKNK 1007
             F      +S  V  K +       IYG        KV+N    + K
Sbjct: 331  -FNKNINFLSRYVNNKSVTKYTTSKIYGK----YIKKVINKAIERKK 372

Length = 422

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  103 bits (258), Expect = 8e-26
 Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 719 YYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG 778
              TPLH A+  G   ++ + L+E   AD+  ++ + RT L+ AA   +L+++K LL+ G
Sbjct: 6   DGRTPLHLAASNGH-LEVVKLLLEN-GADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG 63

Query: 779 ADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDII 838
           AD +  D    +PL  + R G  ++V  LL++ AD N R  K G T LH AA +  L+++
Sbjct: 64  ADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARD-KDGRTPLHLAAKNGHLEVV 122

Query: 839 KLLL 842
           KLLL
Sbjct: 123 KLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  102 bits (255), Expect = 2e-25
 Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 4/128 (3%)

Query: 580 DITMYKNDSPLHLACATGNMDMITYAMKYF-DVNIENDIGETPLHVAVSHGCLEAVKFLL 638
           +       +PLHLA + G+++++   ++   DVN +++ G TPLH+A  +G LE VK LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 639 NTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPS 697
             K  DVN + KDG+T L  A  +  LD+V++LL+  ADVN  D    TPL+ A      
Sbjct: 61  E-KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG-H 118

Query: 698 LDIIKMLV 705
           L+++K+L+
Sbjct: 119 LEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score =  109 bits (274), Expect = 3e-25
 Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 38/272 (13%)

Query: 262 LHSAILNSDIELVKLLLEKGANPLAIEKS----RNRTALHVAAIVESVDIVKLLFDYGAE 317
           L+S I+ +   ++K+   K              +    L++A    ++D+VK+L D GA 
Sbjct: 1   LYSYIVLTKSRIIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGA- 59

Query: 318 KSVNVQNVAGLTPLHIACRRKC-----LEIVKILLDKGADINSGNDDGCTPLFCAIAQ-- 370
             +N       TPLH     K       EIVK+LL+ GA++N+ +++G TPL  AI++  
Sbjct: 60  -DINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKS 118

Query: 371 NCLEVFNYLVNHGCDLSV--PEGERTALHMA--SQFGNLEMVNYLLKH-ININHQDKDGW 425
           N   +  YL+++G ++++   +GE   LH+   S   +L+++  L+   ++IN       
Sbjct: 119 NSYSIVEYLLDNGANVNIKNSDGE-NLLHLYLESNKIDLKILKLLIDKGVDIN------- 170

Query: 426 TPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDIN 484
                 +           ++  G  I  K + G T LH A Y  N   V YL+    + N
Sbjct: 171 --AKNRVN---------YLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPN 219

Query: 485 SENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
             N  G TP++ AI NN+ EIF LLL  G  +
Sbjct: 220 LVNKYGDTPLHIAILNNNKEIFKLLLNNGPSI 251

Length = 422

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 99.8 bits (249), Expect = 1e-24
 Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 16/135 (11%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDK-GVPLNYSRRIIETDTPLHSAILNSDIE 272
           G   L  A      ++ KLL++ G  +N  D  G             TPLH A  N  +E
Sbjct: 7   GRTPLHLAASNGHLEVVKLLLENGADVNAKDNDG------------RTPLHLAAKNGHLE 54

Query: 273 LVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLH 332
           +VKLLLEKGA+  A +K    T LH+AA   ++D+VKLL  +GA   VN ++  G TPLH
Sbjct: 55  IVKLLLEKGADVNARDKD-GNTPLHLAARNGNLDVVKLLLKHGA--DVNARDKDGRTPLH 111

Query: 333 IACRRKCLEIVKILL 347
           +A +   LE+VK+LL
Sbjct: 112 LAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 99.0 bits (247), Expect = 2e-24
 Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 6/131 (4%)

Query: 646 NHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKML 704
           N + +DG T L  A  +  L++V++LLE  ADVN  D    TPL+ A      L+I+K+L
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNG-HLEIVKLL 59

Query: 705 VKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF 764
           ++ GADVN  ++     TPLH A+  G+  D+ + L+ +  AD+  R+ + RT L+ AA 
Sbjct: 60  LEKGADVNARDK--DGNTPLHLAARNGN-LDVVKLLL-KHGADVNARDKDGRTPLHLAAK 115

Query: 765 GNNLDLLKFLL 775
             +L+++K LL
Sbjct: 116 NGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 93.1 bits (232), Expect = 9e-23
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 4/93 (4%)

Query: 296 LHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINS 355
           LH+AA   ++++VKLL + GA    +V      T LH+A R   LEIVK+LL+ GAD+N+
Sbjct: 1   LHLAAKNGNLELVKLLLEKGA----DVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNA 56

Query: 356 GNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV 388
            + DG T L  A     LE+   L+ HG D+++
Sbjct: 57  KDKDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  101 bits (254), Expect = 2e-22
 Identities = 95/372 (25%), Positives = 146/372 (39%), Gaps = 57/372 (15%)

Query: 499 KNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFAS---IEMVSFLLSH-IGVNLQDNK 554
            N  +E    LL  GADV  + +   T LH+   ++S    ++V  LL     VN  +  
Sbjct: 23  SNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERC 82

Query: 555 GCTPLHCAIV-GNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNI 613
           G TPLH  +     L+V   LI + AD                              VN 
Sbjct: 83  GFTPLHLYLYNATTLDVIKLLIKAGAD------------------------------VNA 112

Query: 614 ENDIGETPLHVAVSHGCLEA--VKFLLNTKNIDVNHKTKDGSTALFFACYDKR----LDL 667
           ++ +G TPLHV +S   +    ++ LL  K  DVN     G T L  A   K     ++L
Sbjct: 113 KDKVGRTPLHVYLSGFNINPKVIRLLLR-KGADVNALDLYGMTPL--AVLLKSRNANVEL 169

Query: 668 VEILLEANADVNLGDGTY-TPL-YTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLH 725
           + +L++A ADV   D  + + L +      P   I++ L++ G D   T+      TPLH
Sbjct: 170 LRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDM--LGNTPLH 227

Query: 726 YASYRGDCNDI-ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDIL 784
             +    C       L+      I  RN   +T L++AA  NN    + L+  GAD + +
Sbjct: 228 SMATGSSCKRSLVLPLLIA-GISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAV 286

Query: 785 DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL--RTIKHGSTALH---TAAFHNQLDIIK 839
                +PL    R      V   L  N        T+   S A     + A   +L + K
Sbjct: 287 SSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVAATLNTASVAGGDIPSDA--TRLCVAK 344

Query: 840 LLLKYNADINAE 851
           ++L+    +  E
Sbjct: 345 VVLRGAFSLLPE 356

Length = 471

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 93.2 bits (232), Expect = 2e-22
 Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 1/109 (0%)

Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
           +  D    +PL  +   G  E+V  LLE  AD N +    G T LH AA +  L+I+KLL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKD-NDGRTPLHLAAKNGHLEIVKLL 59

Query: 842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           L+  AD+NA DK G    H A +  N D+V  LL  G+++    K   T
Sbjct: 60  LEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRT 108

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 91.2 bits (227), Expect = 4e-22
 Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 4/93 (4%)

Query: 331 LHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPE 390
           LH+A +   LE+VK+LL+KGAD+N G+ D  T L  A     LE+   L+ HG D++  +
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 391 GE-RTALHMASQFGNLEMVNYLLKH-ININHQD 421
            +  TALH+A++ GNLE+V  LL+H  +IN +D
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 96.5 bits (240), Expect = 8e-21
 Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 20/273 (7%)

Query: 589 PLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNH 647
           PLH A    N+D++   +    +VN  +    TPLH+         +K ++ + N     
Sbjct: 40  PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKC--- 96

Query: 648 KTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTAL---MKDPSLD--IIK 702
                  A+  A  ++ +++ +I+L      N      T     +    KD  ++  I K
Sbjct: 97  SVFYTLVAIKDAFNNRNVEIFKIIL-----TNRYKNIQTIDLVYIDKKSKDDIIEAEITK 151

Query: 703 MLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFA 762
           +L+ YGAD+N+ +      T LHYA+   D   +   L+    A++ + +  N + L+ A
Sbjct: 152 LLLSYGADINMKDRH-KGNTALHYATENKD-QRLTELLLSY-GANVNIPDKTNNSPLHHA 208

Query: 763 AFGNNLDLLKFLLKAGADPDILDLKDTSPL-LSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
               N  ++  LL+ GA  D  D    +PL +S      Y+I+  LLE+  D N ++   
Sbjct: 209 VKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYIL 268

Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKY 854
           G TALH+ +  ++   +KLLL+Y ADIN+ + Y
Sbjct: 269 GLTALHS-SIKSE-RKLKLLLEYGADINSLNSY 299

Length = 477

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 95.5 bits (238), Expect = 1e-20
 Identities = 78/238 (32%), Positives = 108/238 (45%), Gaps = 39/238 (16%)

Query: 225 KKTDIAKLLVDKGVPLNLVDKG--VPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGA 282
           +  D+ K+L+D G  +N   K    PL+Y   I           L    E+VKLLLE GA
Sbjct: 46  RNIDVVKILLDNGADINSSTKNNSTPLHYLSNIK--------YNLTDVKEIVKLLLEYGA 97

Query: 283 NPLAIEKSRNRTALHVAAI--VESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKC- 339
           N  A +     T L  A      S  IV+ L D GA   VN++N  G   LH+       
Sbjct: 98  NVNAPDN-NGITPLLYAISKKSNSYSIVEYLLDNGAN--VNIKNSDGENLLHLYLESNKI 154

Query: 340 -LEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPE--GERTAL 396
            L+I+K+L+DKG DIN+ N                   NYL+++G  +++ +  G  T L
Sbjct: 155 DLKILKLLIDKGVDINAKN-----------------RVNYLLSYGVPINIKDVYGF-TPL 196

Query: 397 HMASQFGNLEMVNYLL-KHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKA 453
           H A    N E V YLL    N N  +K G TPL  +I    + E+F  ++  G  IK 
Sbjct: 197 HYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNN-NKEIFKLLLNNGPSIKT 253

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 86.9 bits (216), Expect = 1e-20
 Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 3/94 (3%)

Query: 759 LNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRT 818
           L+ AA   NL+L+K LL+ GAD ++ D    + L  + R G  EIV  LLE+ AD N + 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 819 IKHGSTALHTAAFHNQLDIIKLLLKYNADINAED 852
            K G+TALH AA +  L+I+KLLL++ ADIN +D
Sbjct: 59  -KDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 95.8 bits (238), Expect = 1e-20
 Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 27/298 (9%)

Query: 342 IVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLS-----VPEGERTAL 396
           I KI+ +KG  IN   D+  TPL  AI     ++    + HG D++     +P    TA+
Sbjct: 17  IEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAI 76

Query: 397 HMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLM 456
            + +        + ++K +  N  D     P+ C  K     ++  +I++ G D+  K  
Sbjct: 77  KIGA--------HDIIKLLIDNGVDTS-ILPIPCIEK-----DMIKTILDCGIDVNIKDA 122

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           +  T LH A   G+L  +  L ++  D+N E+D G  PI+ AIK+N  +I  LLL+ GA 
Sbjct: 123 ELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAY 182

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTPLHCAIVGNQLEVFNHL 574
             VK  +  + LH A E+     +  L+ H   +  +   G TPLH AI+ N+  +   +
Sbjct: 183 ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLI 242

Query: 575 INSNADITMYKNDSPLHLA----CATGNMDMITYAMKYFDVNIENDIGETPLHVAVSH 628
            N++ +       +PLH A    C    +D++ Y     D++I+++ GE P+  A  +
Sbjct: 243 NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKA--DISIKDNKGENPIDTAFKY 298

Length = 434

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 94.7 bits (236), Expect = 2e-20
 Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 43/351 (12%)

Query: 470 NLAMVNYLVKHIDINSENDLGKT-PIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLH 528
            +  + Y++   D+N  +      P+Y A +  ++++  +LL  GAD+    K+N T LH
Sbjct: 14  KVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLH 73

Query: 529 VACEFASI-----EMVSFLLSH-IGVNLQDNKGCTPLHCAIVG--NQLEVFNHLINSNAD 580
                        E+V  LL +   VN  DN G TPL  AI    N   +  +L+++ A+
Sbjct: 74  YLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGAN 133

Query: 581 ITM--YKNDSPLHLA--CATGNMDM----------------ITYAMKY-FDVNIENDIGE 619
           + +     ++ LHL       ++ +                + Y + Y   +NI++  G 
Sbjct: 134 VNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGF 193

Query: 620 TPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN 679
           TPLH AV +   E VK+LL+    + N   K G T L  A  +   ++ ++LL     + 
Sbjct: 194 TPLHYAVYNNNPEFVKYLLD-LGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK 252

Query: 680 LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARF 739
               T   LY       ++  IKML K    + L +   +Y           +   +   
Sbjct: 253 TIIETL--LYFKDKDLNTITKIKMLKKSIMYMFLLDP-GFYKN----RKLIENSKSLKDV 305

Query: 740 LVEECNADI-TLRN--FNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
            + EC  +I  ++    N  T  +   F  N++ L   +   +       K
Sbjct: 306 -INECEKEIERMKEIKLNKVTVYDI-IFNKNINFLSRYVNNKSVTKYTTSK 354

Length = 422

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 93.7 bits (233), Expect = 8e-20
 Identities = 80/264 (30%), Positives = 137/264 (51%), Gaps = 26/264 (9%)

Query: 304 SVDIVKLLFDYGAEKSVNVQNVAGLTPL-----HIACRRKCLEIVKILLDKGADINSGND 358
           S DIVKL  + GA   VN  +    TPL     +I   +  L+IVKIL++ GADIN  N 
Sbjct: 50  STDIVKLFINLGAN--VNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNS 107

Query: 359 DGCTPLFCAIAQ---NCLEVFNYLVNHGCDLSVPEGER-TALHMASQFGN---LEMVNYL 411
           DG TPL+C ++    N LE+  +++ +G D ++ + +  T L +  Q  +   +E++  L
Sbjct: 108 DGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLL 167

Query: 412 L-KHININ-HQDKDGWTPLTCSIKGQAS---LEVFHSIIEAGADI-------KAKLMDGT 459
           L K ++IN H +K+ +  L C  K        ++    ++ G  I       K K M+  
Sbjct: 168 LEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYL 227

Query: 460 TALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVK 519
            +L          +++++  +IDIN  ++LG  P+Y+++ +N+ +IF  LL+LG D+ + 
Sbjct: 228 NSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINII 287

Query: 520 MKSNFTCLHVACEFASIEMVSFLL 543
            +   TCL  A E  S  + + +L
Sbjct: 288 TELGNTCLFTAFENESKFIFNSIL 311

Length = 489

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 84.2 bits (209), Expect = 1e-19
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 559 LHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKY-FDVNIENDI 617
           LH A     LE+   L+   AD+ +   D+ LHLA   GN++++   +++  DVN ++  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDKD 60

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHK 648
           G T LH+A  +G LE VK LL     D+N K
Sbjct: 61  GNTALHLAARNGNLEIVKLLLE-HGADINLK 90

Length = 91

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 90.8 bits (225), Expect = 5e-19
 Identities = 78/269 (28%), Positives = 140/269 (52%), Gaps = 31/269 (11%)

Query: 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGA 316
           ET TPL  AI + D ++V+L ++ GA+   I  ++    L  A  + + DI+KLL D G 
Sbjct: 34  ETTTPLIDAIRSGDAKIVELFIKHGADINHI-NTKIPHPLLTAIKIGAHDIIKLLIDNGV 92

Query: 317 EKS---------------------VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINS 355
           + S                     VN+++    T LH A ++  LE +K+L + GAD+N 
Sbjct: 93  DTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNI 152

Query: 356 GNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKH 414
            +D+GC P+  AI  N  ++   L+  G   +V +    + LH A+++G+   +  L+ H
Sbjct: 153 EDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDH 212

Query: 415 I-NINHQDKDGWTPL-TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLAC-YFGNL 471
             +I ++ K+G+TPL    I  ++++E+  +     A I  + +DG+T LH A     ++
Sbjct: 213 GNHIMNKCKNGFTPLHNAIIHNRSAIELLIN----NASINDQDIDGSTPLHHAINPPCDI 268

Query: 472 AMVNYLVKH-IDINSENDLGKTPIYFAIK 499
            +++ L+ H  DI+ +++ G+ PI  A K
Sbjct: 269 DIIDILLYHKADISIKDNKGENPIDTAFK 297

Length = 434

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 90.1 bits (223), Expect = 6e-19
 Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 10/228 (4%)

Query: 562 AIVGNQLEVFNHLINS--NADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIG- 618
           AI+  +L++   L++   N +  +Y   SP+ LA    + + I   MK+  +        
Sbjct: 9   AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDI 68

Query: 619 ETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADV 678
           E+ LH AV  G ++AV+ LL+      +   KDG T L  A   K+LD++++L+   AD 
Sbjct: 69  ESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP 128

Query: 679 NLGD-GTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIA 737
           ++ +   ++PL+ A+M    +  I++L+ + A +++  E C   TPL  A  +GD   I 
Sbjct: 129 DIPNTDKFSPLHLAVMMG-DIKGIELLIDHKACLDI--EDCCGCTPLIIAMAKGDI-AIC 184

Query: 738 RFLVEE-CNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDIL 784
           + L++   N D   +N     AL +A   N +D+++  +K GAD +I+
Sbjct: 185 KMLLDSGANIDYFGKN-GCVAALCYAIENNKIDIVRLFIKRGADCNIM 231

Length = 413

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 81.9 bits (203), Expect = 8e-19
 Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 590 LHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKT 649
           LHLA   GN++++   ++    ++     +T LH+A  +G LE VK LL     DVN K 
Sbjct: 1   LHLAAKNGNLELVKLLLEK-GADVNLGDTDTALHLAARNGNLEIVKLLLE-HGADVNAKD 58

Query: 650 KDGSTALFFACYDKRLDLVEILLEANADVNL 680
           KDG+TAL  A  +  L++V++LLE  AD+NL
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 80.4 bits (199), Expect = 2e-18
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 494 IYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQD 552
           ++ A KN +LE+  LLL+ GADV   +    T LH+A    ++E+V  LL H   VN +D
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADV--NLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 553 NKGCTPLHCAIVGNQLEVFNHLINSNADITM 583
             G T LH A     LE+   L+   ADI +
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 80.0 bits (198), Expect = 4e-18
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 4/93 (4%)

Query: 462 LHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKM 520
           LHLA   GNL +V  L++   D+N  +    T ++ A +N +LEI  LLL+ GADV  K 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 521 KSNFTCLHVACEFASIEMVSFLLSH-IGVNLQD 552
           K   T LH+A    ++E+V  LL H   +NL+D
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 79.6 bits (197), Expect = 4e-18
 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           L  + + G  E+V  LLE  AD NL       TALH AA +  L+I+KLLL++ AD+NA+
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGD---TDTALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 852 DKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
           DK G  A H A +  N +IV  LL+ G++I
Sbjct: 58  DKDGNTALHLAARNGNLEIVKLLLEHGADI 87

Length = 91

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 89.0 bits (220), Expect = 5e-18
 Identities = 107/415 (25%), Positives = 177/415 (42%), Gaps = 84/415 (20%)

Query: 307 IVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFC 366
           I ++L + GA+  VN +++  +TP+H A  R   ++V +LL  GAD+N    D  + L C
Sbjct: 160 IAEMLLEGGAD--VNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLEC 217

Query: 367 AIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH---ININHQDKD 423
           A+    ++    ++++  +++     +  L +     N ++   LL +    ++N  D  
Sbjct: 218 AVDSKNIDTIKAIIDNRSNIN-----KNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDC 272

Query: 424 GWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDI 483
             TPL  + +  +   +   ++E GAD+ AK                             
Sbjct: 273 KNTPLHHASQAPSLSRLVPKLLERGADVNAK----------------------------- 303

Query: 484 NSENDLGKTPIYFAIKNNH-LEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFL 542
              N  G+TP+Y   KN +  E    L+ LGADV    +   T LH A      + +   
Sbjct: 304 ---NIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVIT 360

Query: 543 LSHIGVNLQDNKGC--TPLHCAIVGNQLEVFNHLINSNADITMY--KNDSPLHLACATGN 598
           L  +G N+     C  TP+H A V N + + N L++  ADI     K  + LH A    N
Sbjct: 361 LLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTN 420

Query: 599 MDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFF 658
             M                               +VK L++ +  +VN K KD ST L +
Sbjct: 421 PYM-------------------------------SVKTLID-RGANVNSKNKDLSTPLHY 448

Query: 659 ACYDK-RLDLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDIIKMLVKYGADV 711
           AC    +LD++E+LL+  ADVN +      PL  AL       I+ +L+ YGA++
Sbjct: 449 ACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYH---GIVNILLHYGAEL 500

Length = 682

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 87.7 bits (217), Expect = 5e-18
 Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 26/249 (10%)

Query: 218 LCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLL 277
           L  A++    DI KLL+D GV  +++   +P       IE D              +K +
Sbjct: 72  LLTAIKIGAHDIIKLLIDNGVDTSILP--IP------CIEKDM-------------IKTI 110

Query: 278 LEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRR 337
           L+ G + + I+ +  +T LH A     ++ +K+LF+YGA+  VN+++  G  P+HIA + 
Sbjct: 111 LDCGID-VNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD--VNIEDDNGCYPIHIAIKH 167

Query: 338 KCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTAL 396
              +I+K+LL+KGA  N  +++G +PL  A           L++HG  +    +   T L
Sbjct: 168 NFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPL 227

Query: 397 HMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLM 456
           H A    N   +  L+ + +IN QD DG TPL  +I     +++   ++   ADI  K  
Sbjct: 228 HNAIIH-NRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDN 286

Query: 457 DGTTALHLA 465
            G   +  A
Sbjct: 287 KGENPIDTA 295

Length = 434

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 79.2 bits (196), Expect = 6e-18
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 5/95 (5%)

Query: 622 LHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLG 681
           LH+A  +G LE VK LL  K  DVN    D  TAL  A  +  L++V++LLE  ADVN  
Sbjct: 1   LHLAAKNGNLELVKLLLE-KGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 682 DGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTN 715
           D    T L+ A     +L+I+K+L+++GAD+NL +
Sbjct: 58  DKDGNTALHLAARNG-NLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 87.8 bits (217), Expect = 1e-17
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 12/284 (4%)

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           DVN ++    TP+H A   G  + V  LL +   DVN    D  + L  A   K +D ++
Sbjct: 170 DVNAKDIYCITPIHYAAERGNAKMVNLLL-SYGADVNIIALDDLSVLECAVDSKNIDTIK 228

Query: 670 ILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASY 729
            +++  +++N  D       + L    + D+   L+ Y A  ++ +      TPLH+AS 
Sbjct: 229 AIIDNRSNINKND------LSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQ 282

Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNF-AAFGNNLDLLKFLLKAGADPDILDLKD 788
               + +   L+E   AD+  +N    T L   A  G + + ++ L+  GAD +  D   
Sbjct: 283 APSLSRLVPKLLER-GADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLY 341

Query: 789 TSPLLSSCRQGLY-EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
            +PL  +       +IV TLLE  A+ N R      T +H AA  N + II  LL Y AD
Sbjct: 342 ITPLHQASTLDRNKDIVITLLELGANVNARDY-CDKTPIHYAAVRNNVVIINTLLDYGAD 400

Query: 848 INA-EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           I A   K G     + C    +  V  L+D G+N+    K   T
Sbjct: 401 IEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLST 444

Length = 682

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 78.1 bits (193), Expect = 2e-17
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 6/97 (6%)

Query: 656 LFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTN 715
           L  A  +  L+LV++LLE  ADVNLGD T T L+ A     +L+I+K+L+++GADVN  +
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGD-TDTALHLAARNG-NLEIVKLLLEHGADVNAKD 58

Query: 716 EACYYMTPLHYASYRGDCNDIARFLVEECNADITLRN 752
           +     T LH A+  G   +I + L+E   ADI L++
Sbjct: 59  K--DGNTALHLAARNG-NLEIVKLLLEH-GADINLKD 91

Length = 91

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 83.9 bits (207), Expect = 9e-17
 Identities = 82/307 (26%), Positives = 147/307 (47%), Gaps = 20/307 (6%)

Query: 262 LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVN 321
           L   I + DIE ++ +++   N + I      T L  A       IV+L   +GA+  +N
Sbjct: 5   LRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGAD--IN 62

Query: 322 VQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN 381
             N     PL  A +    +I+K+L+D G D +        P+ C       ++   +++
Sbjct: 63  HINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTS------ILPIPCIEK----DMIKTILD 112

Query: 382 HGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLE 439
            G D+++ + E +T LH A + G+LE +  L ++  ++N +D +G  P+  +IK     +
Sbjct: 113 CGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHN-FFD 171

Query: 440 VFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHID-INSENDLGKTPIYFAI 498
           +   ++E GA    K  +G + LH A  +G+ A +  L+ H + I ++   G TP++ AI
Sbjct: 172 IIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAI 231

Query: 499 KNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEF-ASIEMVSFLLSH-IGVNLQDNKGC 556
            +N   I   LL   A +  +     T LH A      I+++  LL H   ++++DNKG 
Sbjct: 232 IHNRSAI--ELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGE 289

Query: 557 TPLHCAI 563
            P+  A 
Sbjct: 290 NPIDTAF 296

Length = 434

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 83.8 bits (207), Expect = 1e-16
 Identities = 70/282 (24%), Positives = 115/282 (40%), Gaps = 48/282 (17%)

Query: 556 CTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITY--------- 604
             PLH A+    L+V   L+    ++    +   +PLH+ C   N   +           
Sbjct: 38  FIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS 97

Query: 605 ----------AMKYFDVNI-----------ENDIGETPLHVAVSHGCLEA--VKFLLNTK 641
                     A    +V I              I    +        +EA   K LL + 
Sbjct: 98  VFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLL-SY 156

Query: 642 NIDVNHKTKD-GSTALFFACYDKRLDLVEILLEANADVNLGD-GTYTPLYTALMKDPSLD 699
             D+N K +  G+TAL +A  +K   L E+LL   A+VN+ D    +PL+ A+       
Sbjct: 157 GADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNK-P 215

Query: 700 IIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE---ECNADITLRNFNNR 756
           I+ +L++ GA  +  ++     TPLH +       DI + L+E   + NA   +      
Sbjct: 216 IVHILLENGASTDARDK--CGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGL--- 270

Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQ 798
           TAL+ +    +   LK LL+ GAD + L+    +PL S+ +Q
Sbjct: 271 TALHSSI--KSERKLKLLLEYGADINSLNSYKLTPLSSAVKQ 310

Length = 477

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 75.0 bits (185), Expect = 2e-16
 Identities = 46/137 (33%), Positives = 61/137 (44%), Gaps = 49/137 (35%)

Query: 218 LCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLL 277
           L  A +    ++ KLL++KG  +NL D             TDT LH A  N ++E+VKLL
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGD-------------TDTALHLAARNGNLEIVKLL 47

Query: 278 LEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRR 337
           LE GA+                                    VN ++  G T LH+A R 
Sbjct: 48  LEHGAD------------------------------------VNAKDKDGNTALHLAARN 71

Query: 338 KCLEIVKILLDKGADIN 354
             LEIVK+LL+ GADIN
Sbjct: 72  GNLEIVKLLLEHGADIN 88

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 74.2 bits (183), Expect = 3e-16
 Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 6/89 (6%)

Query: 697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNR 756
           +L+++K+L++ GADVNL +      T LH A+  G+  +I + L+E   AD+  ++ +  
Sbjct: 9   NLELVKLLLEKGADVNLGD----TDTALHLAARNGNL-EIVKLLLE-HGADVNAKDKDGN 62

Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILD 785
           TAL+ AA   NL+++K LL+ GAD ++ D
Sbjct: 63  TALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 81.6 bits (202), Expect = 4e-16
 Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 39/245 (15%)

Query: 499 KNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCT 557
           +   ++    ++          K     L++A E  +I++V  LL +   +N       T
Sbjct: 11  RIIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNST 70

Query: 558 PLHCAIVGNQLEVFNH-------LINSNADITMYKND--SPLHLACAT--GNMDMITYAM 606
           PLH   + N              L+   A++    N+  +PL  A +    +  ++ Y +
Sbjct: 71  PLH--YLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLL 128

Query: 607 KY-FDVNIENDIGETPLHVAVSHGC--LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK 663
               +VNI+N  GE  LH+ +      L+ +K L++ K +D+N K +             
Sbjct: 129 DNGANVNIKNSDGENLLHLYLESNKIDLKILKLLID-KGVDINAKNR------------- 174

Query: 664 RLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMT 722
               V  LL     +N+ D   +TPL+ A+  + + + +K L+  GA+ NL N+     T
Sbjct: 175 ----VNYLLSYGVPINIKDVYGFTPLHYAV-YNNNPEFVKYLLDLGANPNLVNKYGD--T 227

Query: 723 PLHYA 727
           PLH A
Sbjct: 228 PLHIA 232

Length = 422

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 80.0 bits (197), Expect = 1e-15
 Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 11/210 (5%)

Query: 392 ERTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGAD 450
           ++ AL  A  FG L++   LL   IN N +  DG +P+  ++K + S E    +++ GA 
Sbjct: 2   DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDS-EAIKLLMKHGAI 60

Query: 451 IKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINS-ENDL----GKTPIYFAIKNNHLEI 505
              K  D  + LH A   G++  V  L   +D+    +D+    G TP++ A     L+I
Sbjct: 61  PDVKYPDIESELHDAVEEGDVKAVEEL---LDLGKFADDVFYKDGMTPLHLATILKKLDI 117

Query: 506 FNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTPLHCAIV 564
             LL+  GAD  +     F+ LH+A     I+ +  L+ H   ++++D  GCTPL  A+ 
Sbjct: 118 MKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMA 177

Query: 565 GNQLEVFNHLINSNADITMYKNDSPLHLAC 594
              + +   L++S A+I  +  +  +   C
Sbjct: 178 KGDIAICKMLLDSGANIDYFGKNGCVAALC 207

Length = 413

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 79.3 bits (196), Expect = 2e-15
 Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 30/221 (13%)

Query: 396 LHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASL----EVFHSIIEAGAD 450
           L++A +  N+++V  LL +  +IN   K+  TPL      + +L    E+   ++E GA+
Sbjct: 39  LYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGAN 98

Query: 451 IKAKLMDGTTALHLACY--FGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNH--LEI 505
           + A   +G T L  A      + ++V YL+ +  ++N +N  G+  ++  +++N   L+I
Sbjct: 99  VNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKI 158

Query: 506 FNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIV 564
             LL+  G D+  K +                 V++LLS+ + +N++D  G TPLH A+ 
Sbjct: 159 LKLLIDKGVDINAKNR-----------------VNYLLSYGVPINIKDVYGFTPLHYAVY 201

Query: 565 GNQLEVFNHLINSNADI--TMYKNDSPLHLACATGNMDMIT 603
            N  E   +L++  A+        D+PLH+A    N ++  
Sbjct: 202 NNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFK 242

Length = 422

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 78.5 bits (193), Expect = 5e-15
 Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 18/223 (8%)

Query: 661 YDKRLDLVEILLEANAD-VNLG-DGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEAC 718
           Y   ++ +E +++   + +N+  D T TPL  A+ +     I+++ +K+GAD+N  N   
Sbjct: 10  YSGDIEAIEKIIKNKGNCINISVDETTTPLIDAI-RSGDAKIVELFIKHGADINHINTKI 68

Query: 719 YYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG 778
            +  PL  A   G  +DI + L++         N  + + L         D++K +L  G
Sbjct: 69  PH--PLLTAIKIG-AHDIIKLLID---------NGVDTSILPIPCIEK--DMIKTILDCG 114

Query: 779 ADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDII 838
            D +I D +  + L  + ++G  E +  L EY AD N+    +G   +H A  HN  DII
Sbjct: 115 IDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDD-NGCYPIHIAIKHNFFDII 173

Query: 839 KLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
           KLLL+  A  N +D  G+   H+A +  ++  +  L+D G++I
Sbjct: 174 KLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI 216

Length = 434

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 79.0 bits (194), Expect = 6e-15
 Identities = 116/472 (24%), Positives = 201/472 (42%), Gaps = 57/472 (12%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           T +H A+    I++V+ ++++    + I   +  + LH   I+ +V  + +      +  
Sbjct: 43  TAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDII 102

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA----QNCLEV 375
           ++++  + +   H      C+ I+K  +  G DI+    +        I     Q+ L +
Sbjct: 103 LDIKYASIILNKH-KLDEACIHILKEAI-SGNDIHYDKINESIEYMKLIKERIQQDELLI 160

Query: 376 FNYLVNHGCDLSVPE-GERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKG 434
              L+  G D++  +    T +H A++ GN +MVN LL +                    
Sbjct: 161 AEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSY-------------------- 200

Query: 435 QASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPI 494
                        GAD+    +D  + L  A    N+  +  ++ +    ++NDL    +
Sbjct: 201 -------------GADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLS---L 244

Query: 495 YFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASI-EMVSFLLSH-IGVNLQD 552
             AI+N  LE   LL   G  V        T LH A +  S+  +V  LL     VN ++
Sbjct: 245 LKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKN 304

Query: 553 NKGCTPLHC-AIVGNQLEVFNHLINSNADI----TMYKNDSPLHLACATG-NMDMITYAM 606
            KG TPL+  A  G   E    LI   AD+     +Y   +PLH A     N D++   +
Sbjct: 305 IKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLY--ITPLHQASTLDRNKDIVITLL 362

Query: 607 KY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRL 665
           +   +VN  +   +TP+H A     +  +  LL+    D+   ++   TAL FA      
Sbjct: 363 ELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDY-GADIEALSQKIGTALHFALCGTNP 421

Query: 666 DL-VEILLEANADVNLGDGTY-TPLYTALMKDPSLDIIKMLVKYGADVNLTN 715
            + V+ L++  A+VN  +    TPL+ A  K+  LD+I+ML+  GADVN  N
Sbjct: 422 YMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAIN 473

Length = 682

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 73.7 bits (180), Expect = 2e-14
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 7/161 (4%)

Query: 756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG-----LYEIVDTLLEY 810
           R  L+ AA   +  ++K LL +GAD +  D    +PL  +   G       E+   LLE 
Sbjct: 74  RLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEA 133

Query: 811 NA--DTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW 868
            A  D N    + G+T LH AA +   DI++LLL+  AD N+ + YG  A   A +    
Sbjct: 134 GADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRI 193

Query: 869 DIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANI 909
           ++V  LLD G ++           ++ V ++++  L +  I
Sbjct: 194 ELVKLLLDKGLHLSLLKFNLEGVANANVSKRNILNLTSLII 234

Length = 235

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 76.2 bits (188), Expect = 3e-14
 Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 21/217 (9%)

Query: 678 VNLGDGTYTPLYTALMK------DPSLDIIKMLVKYGADVNLTNEACYYMTPLHY--ASY 729
               +     +  AL        + +++ ++ L+  GADVN   E  Y  TPLH      
Sbjct: 1   DEEDESVDIIMEAALYDYLLNASNVTVEEVRRLLAAGADVNFRGE--YGKTPLHLYLHYS 58

Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALN-FAAFGNNLDLLKFLLKAGADPDILDLKD 788
                DI R L+E   AD+        T L+ +      LD++K L+KAGAD +  D   
Sbjct: 59  SEKVKDIVRLLLEA-GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVG 117

Query: 789 TSPLLSSCRQGL---YEIVDTLLEYNADTNLRTIKHGSTALHTA-AFHN-QLDIIKLLLK 843
            +P L     G     +++  LL   AD N     +G T L       N  +++++LL+ 
Sbjct: 118 RTP-LHVYLSGFNINPKVIRLLLRKGADVNALD-LYGMTPLAVLLKSRNANVELLRLLID 175

Query: 844 YNADINAEDKYGKIAFHSACQA--KNWDIVTFLLDAG 878
             AD+ A D   +   H   Q+      IV  L+ AG
Sbjct: 176 AGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAG 212

Length = 471

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 76.1 bits (187), Expect = 3e-14
 Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 21/236 (8%)

Query: 215 YKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELV 274
             A+  A   +  +I K+++      N          +  ++  D      I+  + E+ 
Sbjct: 102 LVAIKDAFNNRNVEIFKIIL-----TNRYKN----IQTIDLVYIDKKSKDDII--EAEIT 150

Query: 275 KLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIA 334
           KLLL  GA+    ++ +  TALH A   +   + +LL  YGA   VN+ +    +PLH A
Sbjct: 151 KLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGAN--VNIPDKTNNSPLHHA 208

Query: 335 CRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCL--EVFNYLVNHGCDLSVPEGE 392
            +     IV ILL+ GA  ++ +  G TPL  ++   C   ++   L+ HG D++     
Sbjct: 209 VKHYNKPIVHILLENGASTDARDKCGNTPLHISVGY-CKDYDILKLLLEHGVDVNAKSYI 267

Query: 393 R--TALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSII 445
              TALH + +  +   +  LL++  +IN  +    TPL+ ++K    + +   +I
Sbjct: 268 LGLTALHSSIK--SERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILI 321

Length = 477

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 75.4 bits (185), Expect = 4e-14
 Identities = 101/448 (22%), Positives = 179/448 (39%), Gaps = 78/448 (17%)

Query: 622  LHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN-L 680
            L + +  G +EA++ ++  K   +N    + +T L  A       +VE+ ++  AD+N +
Sbjct: 5    LRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHI 64

Query: 681  GDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFL 740
                  PL TA+ K  + DIIK+L+  G D ++    C                D+ + +
Sbjct: 65   NTKIPHPLLTAI-KIGAHDIIKLLIDNGVDTSILPIPCIE-------------KDMIKTI 110

Query: 741  VEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGL 800
            ++ C  D+ +++   +T L++A    +L+ +K L + GAD +I D     P+  + +   
Sbjct: 111  LD-CGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNF 169

Query: 801  YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKY---------------- 844
            ++I+  LLE  A  N++   +G + LH AA +     IKLL+ +                
Sbjct: 170  FDIIKLLLEKGAYANVKD-NNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLH 228

Query: 845  ---------------NADINAEDKYGKIAFHSACQAK-NWDIVTFLL----------DAG 878
                           NA IN +D  G    H A     + DI+  LL          + G
Sbjct: 229  NAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKG 288

Query: 879  SN-IEKATKY--RMT----FESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEEC 931
             N I+ A KY  +        ++ V+ K   KL+ ++      I       + +DF +EC
Sbjct: 289  ENPIDTAFKYINKDPVIKDIIANAVLIKEADKLKDSDFLEHIEIKDN---KEFSDFIKEC 345

Query: 932  LREVALLKCEK-PGDQEKVSFYDILSKH-------PAQVEFYAKNPQISNCVKWKDLNLQ 983
              E+  +K  K   D+       I  KH         +      +      +K  D+N +
Sbjct: 346  NEEIEDMKKTKCGCDKNIFDLCLIRIKHKFDGNEDSIKDYLNCLDDNSHRMLKTIDIN-E 404

Query: 984  FPIYGDVICCKFTKVLNSLKNKNKAKYR 1011
            FPIY   I    +     LK+     + 
Sbjct: 405  FPIYSMYISRCISDNGKILKDMGFCIHN 432

Length = 434

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 68.9 bits (169), Expect = 6e-14
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 12/100 (12%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI 271
           + G   L  A +    +I KLL++KG  +N  DK           + +TPLH A  N ++
Sbjct: 38  NDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDK-----------DGNTPLHLAARNGNL 86

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLL 311
           ++VKLLL+ GA+  A +K   RT LH+AA    +++VKLL
Sbjct: 87  DVVKLLLKHGADVNARDKD-GRTPLHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 74.3 bits (182), Expect = 8e-14
 Identities = 41/130 (31%), Positives = 75/130 (57%), Gaps = 4/130 (3%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPLH A +   ++++KLL+ +GA+P  I  +   + LH+A ++  +  ++LL D+ A   
Sbjct: 104 TPLHLATILKKLDIMKLLIARGADP-DIPNTDKFSPLHLAVMMGDIKGIELLIDHKA--C 160

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFC-AIAQNCLEVFNY 378
           +++++  G TPL IA  +  + I K+LLD GA+I+    +GC    C AI  N +++   
Sbjct: 161 LDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRL 220

Query: 379 LVNHGCDLSV 388
            +  G D ++
Sbjct: 221 FIKRGADCNI 230

Length = 413

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 73.0 bits (179), Expect = 3e-13
 Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 21/211 (9%)

Query: 687 PLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNA 746
           PL+ A+ +  +LD++K L+  G +VN  +     +TPLH       C +  +  ++E   
Sbjct: 40  PLHQAV-EARNLDVVKSLLTRGHNVNQPDHR--DLTPLHII-----CKEPNKLGMKEMIR 91

Query: 747 DITLRN-FNNRTALNFAAFGNNLDLLKFLL----KAGADPDI--LDLKDTSPLLSSCRQG 799
            I   + F    A+  A    N+++ K +L    K     D+  +D K    ++ +    
Sbjct: 92  SINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEA---- 147

Query: 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAF 859
             EI   LL Y AD N++    G+TALH A  +    + +LLL Y A++N  DK      
Sbjct: 148 --EITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPL 205

Query: 860 HSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           H A +  N  IV  LL+ G++ +   K   T
Sbjct: 206 HHAVKHYNKPIVHILLENGASTDARDKCGNT 236

Length = 477

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 73.0 bits (179), Expect = 3e-13
 Identities = 74/315 (23%), Positives = 125/315 (39%), Gaps = 29/315 (9%)

Query: 328 LTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLS 387
             PLH A   + L++VK LL +G ++N  +    TPL     +        ++      S
Sbjct: 38  FIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS 97

Query: 388 VPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEA 447
           V      A+  A    N+E+   +L +   N Q  D       S       E+   ++  
Sbjct: 98  VFYTLV-AIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSY 156

Query: 448 GADIKAKLMD-GTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEI 505
           GADI  K    G TALH A    +  +   L+    ++N  +    +P++ A+K+ +  I
Sbjct: 157 GADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPI 216

Query: 506 FNLLLKLGADVAVKMKSNFTCLHVACEFA-SIEMVSFLLSH-IGVNLQDN-KGCTPLHCA 562
            ++LL+ GA    + K   T LH++  +    +++  LL H + VN +    G T LH +
Sbjct: 217 VHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS 276

Query: 563 IVGNQLEVFNHLINSNADITM--YKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGET 620
           I   +      L+   ADI        +PL  A             +Y  +NI       
Sbjct: 277 IKSER--KLKLLLEYGADINSLNSYKLTPLSSA-----------VKQYLCINIGR----- 318

Query: 621 PLHVAVSHGCLEAVK 635
              + +S+ CL    
Sbjct: 319 ---ILISNICLLKRI 330

Length = 477

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 69.9 bits (170), Expect = 3e-13
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 10/149 (6%)

Query: 415 ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNL--- 471
            ++  +D DG  PL  +   +   ++   ++ +GAD+ AK  DG T LHLA   GN    
Sbjct: 64  RHLAARDLDGRLPLHSAAS-KGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEG 122

Query: 472 --AMVNYLVKH----IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFT 525
              +   L++        N  ++ G TP+++A  N   +I  LLL+ GAD   +     T
Sbjct: 123 NIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVT 182

Query: 526 CLHVACEFASIEMVSFLLSHIGVNLQDNK 554
            L  A +   IE+V  LL           
Sbjct: 183 ALDPAAKNGRIELVKLLLDKGLHLSLLKF 211

Length = 235

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 73.2 bits (179), Expect = 4e-13
 Identities = 106/406 (26%), Positives = 164/406 (40%), Gaps = 81/406 (19%)

Query: 529 VACEFASIEMVS----FLLSHIGVNLQDNKGC--TPLHCAIVGNQLEVFNHLINSNAD-- 580
           + C    I+++S    + L   G N  +N+    T +H A+   Q+++   +I  N +  
Sbjct: 9   IMCRGNCIDILSAIDNYDLHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELI 68

Query: 581 -ITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLN 639
            IT +K  S LH  C   N+  I  ++   D +I  DI              +    +LN
Sbjct: 69  YITDHKCHSTLHTICIIPNVMDIVISLT-LDCDIILDI--------------KYASIILN 113

Query: 640 TKNID--VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPS 697
              +D    H  K+  +      YDK  + +E               Y  L    ++   
Sbjct: 114 KHKLDEACIHILKEAISGNDIH-YDKINESIE---------------YMKLIKERIQQDE 157

Query: 698 LDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRT 757
           L I +ML++ GADVN  +   Y +TP+HYA+ RG+   +   L     AD+ +   ++ +
Sbjct: 158 LLIAEMLLEGGADVNAKD--IYCITPIHYAAERGNAKMVNLLL--SYGADVNIIALDDLS 213

Query: 758 ALNFAAFGNNLDLLKF--------------LLKAGADPD----------------ILDLK 787
            L  A    N+D +K               LLKA  + D                I D K
Sbjct: 214 VLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCK 273

Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDI--IKLLLKYN 845
           +T    +S    L  +V  LLE  AD N + IK G T L+  A  N  D   I+ L+   
Sbjct: 274 NTPLHHASQAPSLSRLVPKLLERGADVNAKNIK-GETPLYLMA-KNGYDTENIRTLIMLG 331

Query: 846 ADINAEDKYGKIAFHSACQA-KNWDIVTFLLDAGSNIEKATKYRMT 890
           AD+NA D+      H A    +N DIV  LL+ G+N+        T
Sbjct: 332 ADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKT 377

Length = 682

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 69.9 bits (170), Expect = 4e-13
 Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 9/219 (4%)

Query: 631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYT 690
           L A+  LL+    + + K  +    L         +L+  L+              PL++
Sbjct: 20  LVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRLPLHS 79

Query: 691 ALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRG----DCNDIARFLVE--EC 744
           A  K     I+K+L+  GADVN  +      TPLH A+  G       ++A+ L+E    
Sbjct: 80  AASK-GDDKIVKLLLASGADVNAKDA--DGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD 136

Query: 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIV 804
                LR+ +  T L++AA   + D+++ LL+AGADP+  +    + L  + + G  E+V
Sbjct: 137 LDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELV 196

Query: 805 DTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK 843
             LL+     +L        A    +  N L++  L++ 
Sbjct: 197 KLLLDKGLHLSLLKFNLEGVANANVSKRNILNLTSLIIA 235

Length = 235

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 72.4 bits (178), Expect = 5e-13
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 7/129 (5%)

Query: 768 LDLLKFLLKAGADPDILDLKDTSPL---LSSCRQGLYEIVDTLLEYNADTNLRTIKHGST 824
           ++ ++ LL AGAD +       +PL   L    + + +IV  LLE  AD N      G T
Sbjct: 27  VEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPER-CGFT 85

Query: 825 ALHTAAFHNQ-LDIIKLLLKYNADINAEDKYGKIAFHSACQAKN--WDIVTFLLDAGSNI 881
            LH   ++   LD+IKLL+K  AD+NA+DK G+   H      N    ++  LL  G+++
Sbjct: 86  PLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADV 145

Query: 882 EKATKYRMT 890
                Y MT
Sbjct: 146 NALDLYGMT 154

Length = 471

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 71.6 bits (175), Expect = 7e-13
 Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 44/261 (16%)

Query: 593 ACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKD 651
           A   G +D+    +    + N E   G +P+ +A+     EA+K L+    I  + K  D
Sbjct: 9   AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIP-DVKYPD 67

Query: 652 GSTALFFACYDKRLDLVEILLEANA---DVNLGDGTYTPLYTALMKDPSLDIIKMLVKYG 708
             + L  A  +  +  VE LL+      DV   DG  TPL+ A      LDI+K+L+  G
Sbjct: 68  IESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGM-TPLHLA-TILKKLDIMKLLIARG 125

Query: 709 ADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNL 768
           AD ++ N   +  +PLH A   GD   I                                
Sbjct: 126 ADPDIPNTDKF--SPLHLAVMMGDIKGI-------------------------------- 151

Query: 769 DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHT 828
              + L+   A  DI D    +PL+ +  +G   I   LL+  A+ +         AL  
Sbjct: 152 ---ELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCY 208

Query: 829 AAFHNQLDIIKLLLKYNADIN 849
           A  +N++DI++L +K  AD N
Sbjct: 209 AIENNKIDIVRLFIKRGADCN 229

Length = 413

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 68.7 bits (167), Expect = 1e-12
 Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 9/186 (4%)

Query: 232 LLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR 291
           LL    +   L+   V  + + R ++   PLHSA    D ++VKLLL  GA+  A +   
Sbjct: 47  LLPAASLSELLLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADG 106

Query: 292 NRTALHVAAI-----VESVDIVKLLFDYGAEKSV-NVQNVAGLTPLHIACRRKCLEIVKI 345
           + T LH+AA+       ++++ KLL + GA+  V N+++  G TPLH A      +IV++
Sbjct: 107 D-TPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVEL 165

Query: 346 LLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG--CDLSVPEGERTALHMASQFG 403
           LL+ GAD NS N  G T L  A     +E+   L++ G    L     E  A    S+  
Sbjct: 166 LLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFNLEGVANANVSKRN 225

Query: 404 NLEMVN 409
            L + +
Sbjct: 226 ILNLTS 231

Length = 235

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 71.3 bits (175), Expect = 1e-12
 Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 32/310 (10%)

Query: 262 LHSAILNSD---IELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK 318
           L+  IL SD      ++ LL  G +     +  +   L++      + IVKLL D GA+ 
Sbjct: 4   LYEYILYSDTVDKNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDNGAD- 62

Query: 319 SVNVQNVAGLTPLHIACR------RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ-- 370
            VN +     TPL    R       K  +IVK+LL  GADIN    +G +P+ C I    
Sbjct: 63  -VNYKGYIE-TPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSN 120

Query: 371 -NCLEVFNYLVNHGCDLSVPEGER--TALHM--ASQFGNLEMVNYLLKHININHQDKD-- 423
            N  ++  +L++ G +++  +  R    LHM   S     +++  LL    +N  +K   
Sbjct: 121 INNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF-GVNLFEKTSL 179

Query: 424 -GWTPLTCSIKGQA---SLEVFHSIIEAGADIKAKLMDGTTAL------HLACYFGNLAM 473
            G TP+   ++      S++V   +I+ G +I+       + L      +         +
Sbjct: 180 YGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKV 239

Query: 474 VNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEF 533
           +N+++K+I IN ++  G  P+  + K ++ E FN LLKLG D+    K   T L  A + 
Sbjct: 240 LNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKH 299

Query: 534 ASIEMVSFLL 543
            +I+M++ +L
Sbjct: 300 GNIDMLNRIL 309

Length = 494

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 68.9 bits (168), Expect = 4e-12
 Identities = 80/344 (23%), Positives = 143/344 (41%), Gaps = 84/344 (24%)

Query: 217 ALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKL 276
           ALC A+   + DIA+ L+D G+  N             I +  +P+  A+   D E +KL
Sbjct: 5   ALCDAILFGELDIARRLLDIGINPNF-----------EIYDGISPIKLAMKFRDSEAIKL 53

Query: 277 LLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR 336
           L++ GA P  ++     + LH A     V  V+ L D G     +V    G+TPLH+A  
Sbjct: 54  LMKHGAIP-DVKYPDIESELHDAVEEGDVKAVEELLDLGKFAD-DVFYKDGMTPLHLATI 111

Query: 337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTAL 396
            K L+I+K+L+ +GAD +  N D  +P                                L
Sbjct: 112 LKKLDIMKLLIARGADPDIPNTDKFSP--------------------------------L 139

Query: 397 HMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKL 455
           H+A   G+++ +  L+ H   ++ +D  G TPL  ++  +  + +   ++++GA+I    
Sbjct: 140 HLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAM-AKGDIAICKMLLDSGANI---- 194

Query: 456 MDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
                              +Y  K+  +          + +AI+NN ++I  L +K GAD
Sbjct: 195 -------------------DYFGKNGCV--------AALCYAIENNKIDIVRLFIKRGAD 227

Query: 516 ---VAVKMKSNFTCLHVACEFAS---IEMVSFLLSHIGVNLQDN 553
              + +      T L + C   +    E +  L++ I + +   
Sbjct: 228 CNIMFMIEGEECTILDMICNMCTNLESEAIDALIADIAIRIHKK 271

Length = 413

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 67.2 bits (164), Expect = 2e-11
 Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)

Query: 437 SLEVFHSIIEAGADIKAKLMDGTTAL-----HLACYFGNLAMVNYLVKH-IDINSENDLG 490
           S ++    I  GA++     + +T L     ++  Y   L +V  L+++  DIN +N  G
Sbjct: 50  STDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDG 109

Query: 491 KTPIYFAIKN---NHLEIFNLLLKLGADVAVKMKSNFTCLHVACE---FASIEMVSFLL- 543
           +TP+Y  + N   N+LEI   +++ GAD  +  K  FT L V  +      IE++  LL 
Sbjct: 110 ETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLE 169

Query: 544 SHIGVNLQDNK-GCTPLHCAIVGN---------QLEVFNHLI-----NSNADITMYKNDS 588
             + +N  +NK     LHC    N         +L V N  I      S+    M   +S
Sbjct: 170 KGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNS 229

Query: 589 PLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHK 648
            L+        +++ +   Y D+N  +++G  PL+ +VSH   +  ++LL     D+N  
Sbjct: 230 LLYDN-KRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQ-LGGDINII 287

Query: 649 TKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPS-------LDII 701
           T+ G+T LF A  ++   +   +L    + N    TY  L   ++            DII
Sbjct: 288 TELGNTCLFTAFENESKFIFNSILNKKPNKNTISYTYYKLRKHILNVEGDFINQLEFDII 347

Query: 702 KMLVKY 707
           K  + Y
Sbjct: 348 KKFIAY 353

Length = 489

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 67.1 bits (164), Expect = 2e-11
 Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 44/276 (15%)

Query: 226 KTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI------ELVKLLLE 279
           K  I KLL+D G  +N           +  IE  TPL + + N +I      ++VKLLL+
Sbjct: 49  KIKIVKLLIDNGADVN----------YKGYIE--TPLCAVLRNREITSNKIKKIVKLLLK 96

Query: 280 KGANPLAIE-KSRNRTALHVAAI----VESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI- 333
            GA+   I  K+ N  +  V  I    + + D+++ L   G   + +V+N  G   LH+ 
Sbjct: 97  FGAD---INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVN-DVKNSRGYNLLHMY 152

Query: 334 --ACRRKCLEIVKILLDKGADI-NSGNDDGCTPLFCAIAQNC----LEVFNYLVNHGCDL 386
             +   K  +++KILL  G ++    +  G TP+   +  +     ++V  YL+  G ++
Sbjct: 153 LESFSVK-KDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNI 211

Query: 387 SVPE-GERTAL------HMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLE 439
                G  + L      +        +++N++LK+I IN +DK G+ PL  S K   + E
Sbjct: 212 ETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVD-NYE 270

Query: 440 VFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVN 475
            F+ +++ G DI     DG T L  A   GN+ M+N
Sbjct: 271 AFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLN 306

Length = 494

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 66.6 bits (162), Expect = 3e-11
 Identities = 61/226 (26%), Positives = 89/226 (39%), Gaps = 45/226 (19%)

Query: 665 LDLVEILLEA--NADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGA--DVNLTNEACYY 720
           LD+   LL+   N +  + DG  +P+  A MK    + IK+L+K+GA  DV   +     
Sbjct: 15  LDIARRLLDIGINPNFEIYDG-ISPIKLA-MKFRDSEAIKLLMKHGAIPDVKYPD----I 68

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
            + LH A   GD   +   L     AD         T L+ A     LD++K L+  GAD
Sbjct: 69  ESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGM-TPLHLATILKKLDIMKLLIARGAD 127

Query: 781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKL 840
           PDI +    SPL                                  H A     +  I+L
Sbjct: 128 PDIPNTDKFSPL----------------------------------HLAVMMGDIKGIEL 153

Query: 841 LLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886
           L+ + A ++ ED  G      A    +  I   LLD+G+NI+   K
Sbjct: 154 LIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGK 199

Length = 413

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 65.7 bits (160), Expect = 6e-11
 Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 19/295 (6%)

Query: 261 PLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSV 320
           PLH A+   ++++VK LL +G N +     R+ T LH+     +   +K +     + SV
Sbjct: 40  PLHQAVEARNLDVVKSLLTRGHN-VNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV 98

Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDG--CTPLFCAIAQNCLEVFNY 378
               VA    +  A   + +EI KI+L          D           I +   E+   
Sbjct: 99  FYTLVA----IKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEA--EITKL 152

Query: 379 LVNHGCDLSVPE--GERTALHMASQFGNLEMVNYLL-KHININHQDKDGWTPLTCSIKGQ 435
           L+++G D+++ +     TALH A++  +  +   LL    N+N  DK   +PL  ++K  
Sbjct: 153 LLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVK-H 211

Query: 436 ASLEVFHSIIEAGADIKAKLMDGTTALHLAC-YFGNLAMVNYLVKH-IDINSEND-LGKT 492
            +  + H ++E GA   A+   G T LH++  Y  +  ++  L++H +D+N+++  LG T
Sbjct: 212 YNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLT 271

Query: 493 PIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVAC-EFASIEMVSFLLSHI 546
            ++ +IK+       LLL+ GAD+        T L  A  ++  I +   L+S+I
Sbjct: 272 ALHSSIKSE--RKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNI 324

Length = 477

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 62.9 bits (152), Expect = 1e-10
 Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 11/179 (6%)

Query: 261 PLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSV 320
                I    ++L+ + L    +      S  +  L++   +     +  L         
Sbjct: 6   SALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRH 65

Query: 321 NVQNVA-GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN-----CLE 374
                  G  PLH A  +   +IVK+LL  GAD+N+ + DG TPL  A          +E
Sbjct: 66  LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIE 125

Query: 375 VFNYLVNHGCDLSVP----EGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPL 428
           V   L+  G DL V     E   T LH A+  G+ ++V  LL+   + N ++  G T L
Sbjct: 126 VAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTAL 184

Length = 235

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 61.0 bits (147), Expect = 4e-10
 Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 12/150 (8%)

Query: 549 NLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAM 606
             +D  G  PLH A      ++   L+ S AD+     D  +PLHLA   GN       +
Sbjct: 67  AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEV 126

Query: 607 ---------KYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALF 657
                         N+ ++ G TPLH A  +G  + V+ LL     D N +   G TAL 
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGA-DPNSRNSYGVTALD 185

Query: 658 FACYDKRLDLVEILLEANADVNLGDGTYTP 687
            A  + R++LV++LL+    ++L       
Sbjct: 186 PAAKNGRIELVKLLLDKGLHLSLLKFNLEG 215

Length = 235

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 63.0 bits (153), Expect = 6e-10
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 33/160 (20%)

Query: 759 LNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRT 818
           L  A+ GN   LL+ LLKA  DPDI D K  +PL  +  +G  + V  LL++  + ++R 
Sbjct: 530 LTVASTGNA-ALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRD 588

Query: 819 IKHGSTAL-------H------------------------TAAFHNQLDIIKLLLKYNAD 847
              G+TAL       H                        TAA  N L  +K LLK   +
Sbjct: 589 AN-GNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLN 647

Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKY 887
           +++ED  G  A   A    + D+V  L+  G++++KA   
Sbjct: 648 VDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTD 687

Length = 823

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.1 bits (136), Expect = 9e-10
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 826 LHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKAT 885
           LH AA +  L+++KLLL+  AD+N  D     A H A +  N +IV  LL+ G+++    
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 886 KYRMT 890
           K   T
Sbjct: 59  KDGNT 63

Length = 91

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 61.8 bits (150), Expect = 1e-09
 Identities = 64/285 (22%), Positives = 130/285 (45%), Gaps = 40/285 (14%)

Query: 226 KTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILN-----SDIELVKLLLEK 280
            TDI KL ++ G  +N +D            E  TPL + + N       +++VK+L+E 
Sbjct: 50  STDIVKLFINLGANVNGLDN-----------EYSTPLCTILSNIKDYKHMLDIVKILIEN 98

Query: 281 GANPLAIEKSRNRTALHVA---AIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRR 337
           GA+ +  + S   T L+       + +++I+  + + GA+ ++  ++  G T L +  + 
Sbjct: 99  GAD-INKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKD--GFTMLQVYLQS 155

Query: 338 KC---LEIVKILLDKGADINS-GNDDGCTPLFCAIAQNC----LEVFNYLVNHGCDLSVP 389
                +EI+K+LL+KG DIN+  N +    L C    N      ++    V++G  ++  
Sbjct: 156 NHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKE 215

Query: 390 EGER--------TALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVF 441
                        +L   ++     +++++  +I+IN  D+ G+ PL  S+    + ++F
Sbjct: 216 NKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHN-NRKIF 274

Query: 442 HSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINS 485
             +++ G DI      G T L  A    +  + N ++ K  + N+
Sbjct: 275 EYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNT 319

Length = 489

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 61.8 bits (150), Expect = 1e-09
 Identities = 83/347 (23%), Positives = 130/347 (37%), Gaps = 56/347 (16%)

Query: 631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILL---EANADVNLGDG-TYT 686
           L+ VK L+     D+N K  DG T L+    +  ++ +EILL   E  AD  L D   +T
Sbjct: 89  LDIVKILI-ENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFT 147

Query: 687 PL--YTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDC--NDIARFLVE 742
            L  Y        ++IIK+L++ G D+N  N    Y T   Y  Y  D    DI +  V+
Sbjct: 148 MLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVD 207

Query: 743 ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYE 802
             N  I +   N      F  + N+L             +ILD                 
Sbjct: 208 --NGFI-INKENKSHKKKFMEYLNSL----LYDNKRFKKNILDF---------------- 244

Query: 803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
               +  Y  D N      G   L+ +  HN   I + LL+   DIN   + G     +A
Sbjct: 245 ----IFSY-IDINQVDE-LGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTA 298

Query: 863 CQAKNWDIVTFLLDAGSNIE--KATKYRMTFESSKV-------VEKHVAKLRAAN-IYVD 912
            + ++  I   +L+   N      T Y++      V       +E  + K   A  I   
Sbjct: 299 FENESKFIFNSILNKKPNKNTISYTYYKLRKHILNVEGDFINQLEFDIIKKFIAYVILYV 358

Query: 913 KNIMVQFLT-----TQVNDFYEECLREVALLKCEKPGDQEKVSFYDI 954
           KN  ++ LT     T  +DF E+C + +  +      +    + + I
Sbjct: 359 KNFSIRNLTYPFIFTYFDDFIEKCTKSINEIHNTYVNN---ETIFQI 402

Length = 489

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 458 GTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
           G TALH A   G L +V YL++  +DIN  ++ G T ++ A +N +LE+  LLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 61.0 bits (148), Expect = 2e-09
 Identities = 61/181 (33%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 695 DPSLDIIKMLVKYGADVN-LTNEACYYMTPL-----HYASYRGDCNDIARFLVEECNADI 748
            PS DI+K+ +  GA+VN L NE   Y TPL     +   Y+    DI + L+E   ADI
Sbjct: 48  SPSTDIVKLFINLGANVNGLDNE---YSTPLCTILSNIKDYKHML-DIVKILIEN-GADI 102

Query: 749 TLRNFNNRTALN---FAAFGNNLDLLKFLLKAGADPDILDLKDTSPL---LSSCRQGLYE 802
             +N +  T L       + NNL++L F+++ GAD  +LD    + L   L S      E
Sbjct: 103 NKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIE 162

Query: 803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHN----QLDIIKLLLKYNADINAEDKYGKIA 858
           I+  LLE   D N    K     LH    +N      DI+KL +     IN E+K  K  
Sbjct: 163 IIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKK 222

Query: 859 F 859
           F
Sbjct: 223 F 223

Length = 489

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 25/54 (46%), Positives = 30/54 (55%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
           G T LH A     LE+VK LL+KG DIN  ++DG T L  A     LEV   L+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 22/54 (40%), Positives = 32/54 (59%)

Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL 875
           G TALH AA   +L+++K LL+   DIN  D+ G  A H A +  N +++  LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 60.7 bits (147), Expect = 3e-09
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 6/152 (3%)

Query: 316 AEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
           A+   ++ +  G TPLHIA  +   + V +LL    +++  + +G T L+ AI+    ++
Sbjct: 547 AKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKI 606

Query: 376 FNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSI-K 433
           F  L  H   +S P      L  A++  +L  +  LLK  +N++ +D  G T L  ++ +
Sbjct: 607 FRIL-YHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAE 665

Query: 434 GQASLEVFHSIIEAGADI-KAKLMDGTTALHL 464
               +     +I  GAD+ KA   D  +   L
Sbjct: 666 DHVDMVRL--LIMNGADVDKANTDDDFSPTEL 695

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 53.0 bits (128), Expect = 4e-09
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 362 TPLFCAIAQNCLEVFNYLVNHGCDLS-VPEGERTALHMASQFGNLEMVNYLL 412
           T L  A     LE+  YL+  G D++   E   TALH+A++ GNLE++  LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 53.1 bits (128), Expect = 4e-09
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 311 LFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCA 367
           L ++G    +N  +  G TPLH+A +   LE+V+ LL  G D+N  + DG T L  A
Sbjct: 1   LLEHGPI-DLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 53.4 bits (129), Expect = 7e-09
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 11/85 (12%)

Query: 202 LLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTP 261
           LLE    ++      AL  A +    +I KLL++ G  +N  DK           + +T 
Sbjct: 16  LLEKGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDK-----------DGNTA 64

Query: 262 LHSAILNSDIELVKLLLEKGANPLA 286
           LH A  N ++E+VKLLLE GA+   
Sbjct: 65  LHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 56.4 bits (135), Expect = 1e-08
 Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 12/203 (5%)

Query: 388 VPEGERTALHMASQFGNLEMVNYLLKH--ININHQDKDGWTPLTCSIKGQASLEVFHSII 445
                   L +   F +L +V  LL       N  DK     L  ++   ASL      +
Sbjct: 1   SKPSLSALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKL 60

Query: 446 EAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHL- 503
                + A+ +DG   LH A   G+  +V  L+    D+N+++  G TP++ A  N +  
Sbjct: 61  IVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPP 120

Query: 504 ----EIFNLLLKLGADVAV---KMKSNFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKG 555
               E+  LLL+ GAD+ V   + +   T LH A      ++V  LL      N +++ G
Sbjct: 121 EGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYG 180

Query: 556 CTPLHCAIVGNQLEVFNHLINSN 578
            T L  A    ++E+   L++  
Sbjct: 181 VTALDPAAKNGRIELVKLLLDKG 203

Length = 235

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 57.4 bits (139), Expect = 3e-08
 Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 41/180 (22%)

Query: 262 LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDY---GAEK 318
             +AI N ++EL +LLL       A+      T LH  ++ E VD V+ +  +      K
Sbjct: 57  FVAAIENENLELTELLLNLSCRG-AVGD----TLLHAISL-EYVDAVEAILLHLLAAFRK 110

Query: 319 SVNVQNV---------AGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA 369
           S  ++            G+T LH+A  R+  EIVK+LL++GA + +         F   +
Sbjct: 111 SGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPA----RACGDFFVKS 166

Query: 370 Q--NCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWT 426
           Q  +          HG          + L+ A+  G+  +V  L +   +I   D  G T
Sbjct: 167 QGVDSF-------YHG---------ESPLNAAACLGSPSIVALLSEDPADILTADSLGNT 210

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 17/32 (53%), Positives = 24/32 (75%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGND 358
           G TPLH+A R   LE+VK+LL+ GAD+N+ + 
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFA 659
           D+N  +  G TPLH+A  +G LE V++LL    +D+N +  DG TAL  A
Sbjct: 8   DLNATDGNGNTPLHLAAKYGALELVQWLLK-PGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 49.5 bits (119), Expect = 6e-08
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 620 TPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILL 672
           T LH A   G LE VK+LL    +D+N   +DG+TAL  A  +  L+++++LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKG-VDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 49.5 bits (119), Expect = 8e-08
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 35/88 (39%)

Query: 392 ERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGAD 450
            RTALH A+  G LE+V YLL+  ++IN  D+DG                          
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGN------------------------- 35

Query: 451 IKAKLMDGTTALHLACYFGNLAMVNYLV 478
                    TALH+A   GNL ++  L+
Sbjct: 36  ---------TALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILL 347
            RTALH AAI   +++VK L + G    +N  +  G T LHIA     LE++K+LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGV--DINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 49.3 bits (118), Expect = 9e-08
 Identities = 19/54 (35%), Positives = 28/54 (51%)

Query: 807 LLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFH 860
           LLE+       T  +G+T LH AA +  L++++ LLK   D+N  D  G  A  
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALD 54

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 17/33 (51%), Positives = 24/33 (72%)

Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINAEDK 853
            G+T LH AA +  L+++KLLL+  AD+NA DK
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 54.7 bits (132), Expect = 2e-07
 Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 28/276 (10%)

Query: 633 AVKFLLNTKNIDVNHKTKDGSTAL--FFACYDKRLDLVEILLEANADVNLGDGTYTPLYT 690
           A++FLL T   DVN +   G++ L  +    D ++ +V++L++  ADVN      TPL  
Sbjct: 18  ALEFLLRT-GFDVN-EEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGYIETPL-C 74

Query: 691 ALMKDPSLD------IIKMLVKYGADVNL-TNEACYYMTPLHYASYRGDCNDIARFLVEE 743
           A++++  +       I+K+L+K+GAD+NL T      +    Y S   +C D+ RFL+ +
Sbjct: 75  AVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNC-DMLRFLLSK 133

Query: 744 ---CNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP-DILDLKDTSPLLSSCRQG 799
               N     R + N   +   +F    D++K LL  G +  +   L   +P+    R  
Sbjct: 134 GINVNDVKNSRGY-NLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRND 192

Query: 800 LYEIVDTLLEY--NADTNLRTIKHGSTAL-------HTAAFHNQLDIIKLLLKYNADINA 850
           +  I   +++Y      N+ T  +GS ++       +      +  ++  +LKY   IN 
Sbjct: 193 IDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKY-IKINK 251

Query: 851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886
           +DK G      + +  N++   +LL  G +I   +K
Sbjct: 252 KDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSK 287

Length = 494

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 586 NDSPLHLACATGNMDMITYAMKYF-DVNIENDIGETPLHVAVSHGCLEAVKFLL 638
             + LH A  +G ++++ Y ++   D+N  ++ G T LH+A  +G LE +K LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 492 TPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLL 543
           T ++ A  +  LE+   LL+ G D+    +   T LH+A E  ++E++  LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 258 TDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLL 311
             T LH A ++  +ELVK LLEKG +    ++    TALH+AA   +++++KLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDED-GNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 477 LVKH--IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVA 530
           L++H  ID+N+ +  G TP++ A K   LE+   LLK G D+ ++     T L +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 53.3 bits (128), Expect = 5e-07
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 19/133 (14%)

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSI--KGQASLEVFH-----SI 444
           RT LH+A+  G  + V  LLKH  N++ +D +G T L  +I  K      + +     S 
Sbjct: 559 RTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISD 618

Query: 445 IEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHL 503
             A  D+          L  A    +L  +  L+K  ++++SE+  G T +  A+  +H+
Sbjct: 619 PHAAGDL----------LCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHV 668

Query: 504 EIFNLLLKLGADV 516
           ++  LL+  GADV
Sbjct: 669 DMVRLLIMNGADV 681

Length = 823

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 52.3 bits (125), Expect = 7e-07
 Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 5/156 (3%)

Query: 735 DIARFLVEE-CNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLL 793
           DIAR L++   N +  +  ++  + +  A    + + +K L+K GA PD+      S L 
Sbjct: 16  DIARRLLDIGINPNFEI--YDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELH 73

Query: 794 SSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK 853
            +  +G  + V+ LL+     +    K G T LH A    +LDI+KLL+   AD +  + 
Sbjct: 74  DAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNT 133

Query: 854 YGKIAFHSACQAKNWDIVTFLLD--AGSNIEKATKY 887
                 H A    +   +  L+D  A  +IE     
Sbjct: 134 DKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGC 169

Length = 413

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 46.5 bits (111), Expect = 9e-07
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLL 775
             T LH A+  G   ++ ++L+E+   DI   + +  TAL+ AA   NL++LK LL
Sbjct: 1   GRTALHKAAISG-RLELVKYLLEK-GVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165089 PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provisional

 Score = 52.6 bits (126), Expect = 9e-07
 Identities = 98/463 (21%), Positives = 200/463 (43%), Gaps = 55/463 (11%)

Query: 247 VPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKG-ANPLAIEKSRNRTALH--VAAIVE 303
           +P N    I+ T     +     D++L+K +++ G  N   + K      LH  +  +  
Sbjct: 132 IPNNGDMDILYTYFNSPNTR-GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYV 190

Query: 304 SVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRK--CLEIVKILLDKGADINSGNDDGC 361
            +DI++ L + G   +VN+QN   +TPLH        C  ++K +++ G D++    +G 
Sbjct: 191 DIDILEWLCNNG--VNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGM 248

Query: 362 TPLFCAI--AQNCLEVFNYLVNHGCD----LSVPEGERTALHMASQFGNLEMVNYLLKHI 415
           +P+   I    N       +     D     ++P    + + +A       + ++L   +
Sbjct: 249 SPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGV 308

Query: 416 NINHQDKDGWTPLTCSI-KGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMV 474
            ++++D  G T L   I +   S ++   + E G D+      G T LH   Y   L++V
Sbjct: 309 KLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLH--TYLSMLSVV 366

Query: 475 NYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLH----VA 530
           N L    D  ++ND+             L++   L+ LGAD+       +T L      A
Sbjct: 367 NIL----DPETDNDI------------RLDVIQCLISLGADITAVNCLGYTPLTSYICTA 410

Query: 531 CEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINS-NADITMYKNDSP 589
             +   +++  L+S   +N+  ++    L    V +   + +H+I   N    +Y ++  
Sbjct: 411 QNYMYYDIIDCLISDKVLNMVKHRILQDL-LIRVDDTPCIIHHIIAKYNIPTDLYTDE-- 467

Query: 590 LHLACATGNM-DMITYAM-KYFDVNIENDIGETPLHVAV-SHG----CLEAVKFLLNTKN 642
            +    +  + D+   A+ + ++  +    G TPLHV++ SH      +++  +LL+ + 
Sbjct: 468 -YEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQ- 525

Query: 643 IDVNHKTKDGSTALFFACYDKRLD-----LVEILLEANADVNL 680
            ++N  TK+G T L     + RL      +V+ +L+   +V++
Sbjct: 526 YNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDI 568

Length = 764

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 52.0 bits (125), Expect = 1e-06
 Identities = 47/184 (25%), Positives = 69/184 (37%), Gaps = 35/184 (19%)

Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGN-NLDLLKFLLKAGADPDILDLKD 788
           RGD   + R L E    +I   +   R+AL  AA  N NL+L + LL       + D   
Sbjct: 27  RGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGD--- 83

Query: 789 TSPLLSSCRQGLYEIVDTLL-------------EYNADTNLRTIKHGSTALHTAAFHNQL 835
              LL +      + V+ +L             E   D        G TALH AA     
Sbjct: 84  --TLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNY 141

Query: 836 DIIKLLLKYNADINA--------EDKYGKIAFHS-------ACQAKNWDIVTFLLDAGSN 880
           +I+KLLL+  A + A        + +     +H        AC   +  IV  L +  ++
Sbjct: 142 EIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLG-SPSIVALLSEDPAD 200

Query: 881 IEKA 884
           I  A
Sbjct: 201 ILTA 204

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 51.4 bits (123), Expect = 2e-06
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 9/170 (5%)

Query: 428 LTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSE 486
           LT +  G A+L     +++A  D       G T LH+A   G    V  L+KH  +++  
Sbjct: 530 LTVASTGNAAL--LEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR 587

Query: 487 NDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH- 545
           +  G T ++ AI   H +IF +L    +        +  C   A +   +  +  LL   
Sbjct: 588 DANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCT--AAKRNDLTAMKELLKQG 645

Query: 546 IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADIT---MYKNDSPLHL 592
           + V+ +D++G T L  A+  + +++   LI + AD+       + SP  L
Sbjct: 646 LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTEL 695

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 755 NRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLL 808
            RTAL+ AA    L+L+K+LL+ G D +  D    + L  +   G  E++  LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 379 LVNHGCDL--SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC 430
           L+ HG     +      T LH+A+++G LE+V +LLK  +++N +D DG T L  
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDL 55

Length = 56

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 50.7 bits (121), Expect = 4e-06
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 258 TDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAE 317
             TP H+      I+ V   +      L +E         +AA  ++V   ++L   GA+
Sbjct: 61  DATPDHNLTTEEVIDPVVAHM------LTVE------LCQLAASGDAVGA-RILLTGGAD 107

Query: 318 KSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFN 377
              N ++  G TPLHIAC    +++V++LL+ GAD    + DG TPL  A      EV  
Sbjct: 108 --PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQ 165

Query: 378 YLVNH 382
            L  H
Sbjct: 166 LLSRH 170

Length = 664

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 18/28 (64%), Positives = 22/28 (78%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADIN 354
           G TPLH+A R   LE+VK+LL+ GADIN
Sbjct: 2   GNTPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.8 bits (104), Expect = 7e-06
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 684 TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLV 741
             T L+ A +    L+++K L++ G D+N T+E     T LH A+  G+  ++ + L+
Sbjct: 1   GRTALHKAAISG-RLELVKYLLEKGVDINRTDE--DGNTALHIAAENGNL-EVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 523 NFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLI 575
             T LH A     +E+V +LL   + +N  D  G T LH A     LEV   L+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 444 IIEAGADIKAK-LMDGTTALHLACYFGNLAMVNYLVKHIDINSE--NDLGKTPIYFAIKN 500
           ++E GADI  K  + G T LH+A Y  N  +  +L     +N E  N   KTP Y A + 
Sbjct: 77  LMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACER 136

Query: 501 NHLEIFNLLLKLGA 514
           +  ++ N+L   GA
Sbjct: 137 HDAKMMNILRAKGA 150

Length = 154

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 48.3 bits (115), Expect = 2e-05
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPLH A      + V +LL+   N + I  +   TAL  A   +   I ++L+ + +   
Sbjct: 560 TPLHIAASKGYEDCVLVLLKHACN-VHIRDANGNTALWNAISAKHHKIFRILYHFASISD 618

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
            +    A    L  A +R  L  +K LL +G +++S +  G T L  A+A++ +++   L
Sbjct: 619 PH----AAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLL 674

Query: 380 VNHGCDL 386
           + +G D+
Sbjct: 675 IMNGADV 681

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 11/65 (16%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G  AL  A    + ++ K L++KGV +N  D+           + +T LH A  N ++E+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDE-----------DGNTALHIAAENGNLEV 49

Query: 274 VKLLL 278
           +KLLL
Sbjct: 50  LKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 277 LLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIA 334
           LLE G   L        T LH+AA   ++++V+ L   G    +N+++  GLT L +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGV--DLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 48.5 bits (116), Expect = 2e-05
 Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 38/181 (20%)

Query: 479 KHIDINSENDLGKTPIYF-AIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIE 537
           K ++IN  + LG++ ++  AI+N +LE+  LLL L    AV      T LH       ++
Sbjct: 41  KKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGD----TLLHAISL-EYVD 95

Query: 538 MVSFLLSHIG-----------VNLQD----NKGCTPLHCAIVGNQLEVFNHLINSNADI- 581
            V  +L H+             N Q       G T LH A      E+   L+   A + 
Sbjct: 96  AVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVP 155

Query: 582 ---------------TMYKNDSPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVA 625
                          + Y  +SPL+ A   G+  ++    +   D+   + +G T LH+ 
Sbjct: 156 ARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLL 215

Query: 626 V 626
           V
Sbjct: 216 V 216

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTK 650
           G TPLH+A  +G LE VK LL     DVN + K
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLE-AGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 48.4 bits (115), Expect = 2e-05
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 772 KFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAF 831
           + LL  GADP+  D    +PL  +C  G  ++V  LLE+ AD  L   K G T L  A  
Sbjct: 99  RILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL-LDKDGKTPLELAEE 157

Query: 832 HNQLDIIKLLLKY 844
           +   ++++LL ++
Sbjct: 158 NGFREVVQLLSRH 170

Length = 664

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 19/28 (67%), Positives = 22/28 (78%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADIN 354
           G TPLH+A     LE+VK+LLDKGADIN
Sbjct: 2   GRTPLHLAAENGNLEVVKLLLDKGADIN 29

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 47.0 bits (111), Expect = 4e-05
 Identities = 59/223 (26%), Positives = 91/223 (40%), Gaps = 11/223 (4%)

Query: 286 AIEKSRNRTALHVAAIVESVD--IVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIV 343
           AIE S N   LH    ++ +D   V+ L   G   S N  +  G  PLHIA +     IV
Sbjct: 31  AIEPSGNYHILHAYCGIKGLDERFVEELLHRGY--SPNETDDDGNYPLHIASKINNNRIV 88

Query: 344 KILLDKGADINSGNDDGCTPLF--CAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQ 401
            +LL  GAD N+ +    TPL+         +E  N LV +G  ++    E     + + 
Sbjct: 89  AMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLAC 148

Query: 402 FGNLEMVNYLLKHININHQ--DKDGWTPLTCSI-KGQASLEVFHSIIEAGADIKAKLMDG 458
               E V   +  I    +  DK G   +   +            +++ G        DG
Sbjct: 149 TDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDG 208

Query: 459 TTALHLAC--YFGNLAMVNYLVKHIDINSENDLGKTPIYFAIK 499
            T LH+ C     N+ ++N L+   D+N +N  G +P+   IK
Sbjct: 209 NTPLHIVCSKTVKNVDIINLLLPSTDVNKQNKFGDSPLTLLIK 251

Length = 446

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 542 LLSH--IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLA 593
           LL H  I +N  D  G TPLH A     LE+   L+    D+ +  +D  + L LA
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 41.0 bits (97), Expect = 5e-05
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDK 422
            T LH+A++ G+LE+V  LL+   ++N +DK
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 637 LLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTA 691
           LL    ID+N    +G+T L  A     L+LV+ LL+   D+NL D    T L  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 46.4 bits (110), Expect = 6e-05
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 807 LLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAK 866
           LL   AD N R    G T LH A  +  + ++++LL++ AD    DK GK     A +  
Sbjct: 101 LLTGGADPNCRDY-DGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENG 159

Query: 867 NWDIVTFLL 875
             ++V  L 
Sbjct: 160 FREVVQLLS 168

Length = 664

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 40.3 bits (95), Expect = 7e-05
 Identities = 16/30 (53%), Positives = 20/30 (66%)

Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINA 850
            G T LH AA +  L+++KLLL   ADINA
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.8 bits (96), Expect = 9e-05
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 704 LVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFA 762
           L+++G       +     TPLH A+  G   ++ ++L++    D+ LR+ +  TAL+ A
Sbjct: 1   LLEHGPIDLNATDGNGN-TPLHLAAKYG-ALELVQWLLKP-GVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 40.2 bits (95), Expect = 9e-05
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSEND 488
           DG T LHLA   G+L +V  L++   D+N+ + 
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 45.5 bits (108), Expect = 1e-04
 Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 32/218 (14%)

Query: 666 DLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPL 724
           + +E LL    DVN    G    L     KD  + I+K+L+  GADVN      Y  TPL
Sbjct: 17  NALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG---YIETPL 73

Query: 725 -----HYASYRGDCNDIARFLVEECNADITLRNFNNRTAL-----NFAAFGNNLDLLKFL 774
                +          I + L++   ADI L+ FN  + +     N     NN D+L+FL
Sbjct: 74  CAVLRNREITSNKIKKIVKLLLKF-GADINLKTFNGVSPIVCFIYNSNI--NNCDMLRFL 130

Query: 775 LKAGADPDILDLKDTSPL------LSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTAL-- 826
           L  G   ++ D+K++         L S      +++  LL +  +   +T  +G T +  
Sbjct: 131 LSKGI--NVNDVKNSRGYNLLHMYLESFSVKK-DVIKILLSFGVNLFEKTSLYGLTPMNI 187

Query: 827 ---HTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
              +     + + +IK L+K   +I   +   +    S
Sbjct: 188 YLRNDIDVIS-IKVIKYLIKKGVNIETNNNGSESVLES 224

Length = 494

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 789 TSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLL 842
            + L  +   G  E+V  LLE   D N      G+TALH AA +  L+++KLLL
Sbjct: 2   RTALHKAAISGRLELVKYLLEKGVDINRTDED-GNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 652 GSTALFFACYDKRLDLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDIIKMLV 705
           G TAL  A    RL+LV+ LLE   D+N   +   T L+ A     +L+++K+L+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENG-NLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 774 LLKAG-ADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTA 829
           LL+ G  D +  D    +PL  + + G  E+V  LL+   D NLR    G TAL  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRD-SDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILD 785
           +  T L+ AA   +L+++K LL+AGAD +  D
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165089 PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provisional

 Score = 45.7 bits (108), Expect = 1e-04
 Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 48/281 (17%)

Query: 631 LEAVKFLLNTKNIDVNHKTKD-GSTAL--FFACYDKRLDLVEILLEANADVNLGDGTY-T 686
           L+ +K++++   +++N+  K  G   L  +       +D++E L     +VNL +    T
Sbjct: 155 LDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLIT 214

Query: 687 PLYTALMKDP-SLDIIKMLVKYGADVNLTNEACYYMTP-LHYASYRGDCN-DIARFLVEE 743
           PL+T L+       +IK +++ G D+++  +    M+P + Y     + N +I    +E 
Sbjct: 215 PLHTYLITGNVCASVIKKIIELGGDMDM--KCVNGMSPIMTYIINIDNINPEITNIYIES 272

Query: 744 CNADITLRNFNNRTALNFAAFGN-NLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYE 802
            + +  ++N             N ++ ++   L+ G     L  KD     S+ R  L++
Sbjct: 273 LDGN-KVKNIPMILHSYITLARNIDISVVYSFLQPGV---KLHYKD-----SAGRTCLHQ 323

Query: 803 ----------IVDTLLEYNADTNLRTIKHGSTALHT------------AAFHN--QLDII 838
                     I+  L EY  D N      G+T LHT                N  +LD+I
Sbjct: 324 YILRHNISTDIIKLLHEYGNDLN-EPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVI 382

Query: 839 KLLLKYNADINAEDKYGKIAFHS-ACQAKNW---DIVTFLL 875
           + L+   ADI A +  G     S  C A+N+   DI+  L+
Sbjct: 383 QCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLI 423

Length = 764

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 45.0 bits (106), Expect = 1e-04
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 13/199 (6%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYF--AIKNNHLEIFNLLLKLG 513
           DG   LH+A    N  +V  L+ H  D N+ +   KTP+Y+     +  +E  NLL++ G
Sbjct: 71  DGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYG 130

Query: 514 ADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEVF 571
           A +   +        +AC   S  +   ++S IG    + D  G   +H  ++ +  +  
Sbjct: 131 AKINNSVDEEGCGPLLACTDPSERVFKKIMS-IGFEARIVDKFGKNHIHRHLMSDNPKAS 189

Query: 572 NHLINSNADITMYKND----SPLHLACA--TGNMDMITYAMKYFDVNIENDIGETPLHVA 625
                    I+  K D    +PLH+ C+    N+D+I   +   DVN +N  G++PL + 
Sbjct: 190 TISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPSTDVNKQNKFGDSPLTLL 249

Query: 626 V-SHGCLEAVKFLLNTKNI 643
           + +      +  LL+T N+
Sbjct: 250 IKTLSPAHLINKLLSTSNV 268

Length = 446

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 12/137 (8%)

Query: 259 DTPLHSAILNS--DIELVKLLLEKGANPLAIEKSRNRTALHVAAIVE---SVDIVKLLFD 313
           +TP+ S +     ++E++K L+E GA+     +  N +ALH           +I+K+L D
Sbjct: 52  ETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILID 111

Query: 314 YGAEKSVNVQNVAGLTPLHI---ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA- 369
            G+  S+  ++  G   LH+       + + ++K+L+D G    + + D    L+  I  
Sbjct: 112 SGS--SITEEDEDGKNLLHMYMCNFNVR-INVIKLLIDSGVSFLNKDFDNNNILYSYILF 168

Query: 370 QNCLEVFNYLVNHGCDL 386
            +  ++F++L + G D+
Sbjct: 169 HSDKKIFDFLTSLGIDI 185

Length = 209

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 45.2 bits (107), Expect = 2e-04
 Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 7/136 (5%)

Query: 346 LLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGN 404
           LL    D + G+  G TPL  A ++   +    L+ H C++ + +    TAL  A    +
Sbjct: 544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH 603

Query: 405 LEMVN--YLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTAL 462
            ++    Y    I+  H   D    L C+   +  L     +++ G ++ ++   G TAL
Sbjct: 604 HKIFRILYHFASISDPHAAGD----LLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATAL 659

Query: 463 HLACYFGNLAMVNYLV 478
            +A    ++ MV  L+
Sbjct: 660 QVAMAEDHVDMVRLLI 675

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 557 TPLHCAIVGNQLEVFNHLINSNADITM--YKNDSPLHLACATGNMDMITY 604
           T LH A +  +LE+  +L+    DI       ++ LH+A   GN++++  
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKL 52

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 16/46 (34%), Positives = 26/46 (56%)

Query: 740 LVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD 785
           L+E    D+   + N  T L+ AA    L+L+++LLK G D ++ D
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRD 46

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 346 LLDKG-ADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMA 399
           LL+ G  D+N+ + +G TPL  A     LE+  +L+  G DL++ + +  TAL +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 16/28 (57%), Positives = 20/28 (71%)

Query: 259 DTPLHSAILNSDIELVKLLLEKGANPLA 286
           +TPLH A  N  +E+VKLLLE GA+  A
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVNA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 44.7 bits (105), Expect = 2e-04
 Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 12/207 (5%)

Query: 236 KGVPLNLVDKGVPLNYSRRIIETDT--PLHSAILNSDIELVKLLLEKGANPLAIEKSRNR 293
           KG+    V++ +   YS    + D   PLH A   ++  +V +LL  GA+P A +K +++
Sbjct: 48  KGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDK-QHK 106

Query: 294 TALHVAAIV--ESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           T L+  +    E ++ + LL  YGA K  N  +  G  PL +AC      + K ++  G 
Sbjct: 107 TPLYYLSGTDDEVIERINLLVQYGA-KINNSVDEEGCGPL-LACTDPSERVFKKIMSIGF 164

Query: 352 DINSGNDDGCTPLFCAIAQNC--LEVFNYLVNHGCDLSVPEGE-RTALHM--ASQFGNLE 406
           +    +  G   +   +  +       ++++  G   S P+ +  T LH+  +    N++
Sbjct: 165 EARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVD 224

Query: 407 MVNYLLKHININHQDKDGWTPLTCSIK 433
           ++N LL   ++N Q+K G +PLT  IK
Sbjct: 225 IINLLLPSTDVNKQNKFGDSPLTLLIK 251

Length = 446

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 44.5 bits (105), Expect = 3e-04
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNH 502
           ++  GAD   +  DG T LH+AC  G++ +V  L++   D    +  GKTP+  A +N  
Sbjct: 101 LLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGF 160

Query: 503 LEIFNLLLK 511
            E+  LL +
Sbjct: 161 REVVQLLSR 169

Length = 664

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 16/30 (53%), Positives = 23/30 (76%)

Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINA 850
            G+T LH AA +  L+++KLLL++ ADINA
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQ---LDIIKLLLKYNADINAEDKYGKIA 858
           EI+  L+E  AD N +T  +  +ALH     N+    +I+K+L+   + I  ED+ GK  
Sbjct: 67  EILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNL 126

Query: 859 FHSACQ--AKNWDIVTFLLDAGSNI 881
            H          +++  L+D+G + 
Sbjct: 127 LHMYMCNFNVRINVIKLLIDSGVSF 151

Length = 209

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 14/133 (10%)

Query: 658 FACYDKR---LDLVEILLEANADVN--LGDGTYTPL--YTALMKDPSLDIIKMLVKYGAD 710
           F+C +K    +++++ L+E  ADVN    D   + L  Y +  K+   +I+K+L+  G+ 
Sbjct: 56  FSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSS 115

Query: 711 VNLTNEACYYMTPLHYASYRGDCN---DIARFLVEECNADITLRNFNNRTALNFAAFGNN 767
           +   +E       LH   Y  + N   ++ + L++   + +     NN    ++  F ++
Sbjct: 116 ITEEDEDG--KNLLH--MYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSD 171

Query: 768 LDLLKFLLKAGAD 780
             +  FL   G D
Sbjct: 172 KKIFDFLTSLGID 184

Length = 209

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 44.1 bits (104), Expect = 4e-04
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 737 ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSC 796
           AR L+    AD   R+++ RT L+ A    ++ +++ LL+ GADP +LD    +PL  + 
Sbjct: 98  ARILLTG-GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAE 156

Query: 797 RQGLYEIVDTLLEY 810
             G  E+V  L  +
Sbjct: 157 ENGFREVVQLLSRH 170

Length = 664

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 651 DGSTALFFACYDKRLDLVEILLEANADVNLGD 682
           DG+T L  A  +  L++V++LLEA ADVN  D
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 43.7 bits (103), Expect = 6e-04
 Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 34/171 (19%)

Query: 509 LLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQ 567
           LLK   D  +      T LH+A      + V  LL H   V+++D  G T L  AI    
Sbjct: 544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH 603

Query: 568 LEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVS 627
            ++F  L                H A  +             D +   D+    L  A  
Sbjct: 604 HKIFRIL---------------YHFASIS-------------DPHAAGDL----LCTAAK 631

Query: 628 HGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADV 678
              L A+K LL  + ++V+ +   G+TAL  A  +  +D+V +L+   ADV
Sbjct: 632 RNDLTAMKELLK-QGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADV 681

Length = 823

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.9 bits (89), Expect = 6e-04
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAVKMK 521
           G TP++ A +N HLE+  LLL+ GADV  + K
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 5/59 (8%)

Query: 671 LLEA-NADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYA 727
           LLE    D+N  DG   TPL+ A  K  +L++++ L+K G D+NL +      T L  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLA-AKYGALELVQWLLKPGVDLNLRDSDGL--TALDLA 56

Length = 56

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNH 647
           G TPLH+A  +G LE VK LL     D+N 
Sbjct: 2   GNTPLHLAARNGNLELVKLLLE-HGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 271 IELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQ--NVAGL 328
            E +KLL+E GA+    E+    T LH+A   ++ ++   L +   +  VN++  N A  
Sbjct: 71  QEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCN---QPGVNMEILNYAFK 127

Query: 329 TPLHIACRRKCLEIVKILLDKGA 351
           TP ++AC R   +++ IL  KGA
Sbjct: 128 TPYYVACERHDAKMMNILRAKGA 150

Length = 154

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 458 GTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFA 497
           G T LHLA  +G L +V +L+K  +D+N  +  G T +  A
Sbjct: 16  GNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 42.6 bits (100), Expect = 0.001
 Identities = 22/64 (34%), Positives = 34/64 (53%)

Query: 482 DINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSF 541
           D N  +  G+TP++ A  N H+++  +LL+ GAD  +  K   T L +A E    E+V  
Sbjct: 107 DPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQL 166

Query: 542 LLSH 545
           L  H
Sbjct: 167 LSRH 170

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 42.2 bits (99), Expect = 0.001
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)

Query: 343 VKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQ 401
            +ILL  GAD N  + DG TPL  A A   ++V   L+  G D ++ + + +T L +A +
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 402 FGNLEMVNYLLKHININHQ 420
            G  E+V  L +H   + +
Sbjct: 158 NGFREVVQLLSRHSQCHFE 176

Length = 664

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 36.8 bits (86), Expect = 0.001
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 651 DGSTALFFACYDKRLDLVEILLEANADVN 679
           DG+T L  A  +  L+LV++LLE  AD+N
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|165108 PHA02741, PHA02741, hypothetical protein; Provisional

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 435 QASLEVFHSIIEAGADIKAK-LMDGTTALHLACYFGNLAMVNYLVKH--IDINSENDLGK 491
           Q + E+   +IE GADI A+ +++G TALHLA +  +  +  +L     ID++  N   K
Sbjct: 74  QLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNK 133

Query: 492 TPIYFAIKNNHLEIFNLLLKLGA 514
           +P   AI N  + +  +L ++ A
Sbjct: 134 SPFELAIDNEDVAMMQILREIVA 156

Length = 169

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 41.7 bits (98), Expect = 0.002
 Identities = 79/380 (20%), Positives = 136/380 (35%), Gaps = 99/380 (26%)

Query: 495 YFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFAS--------IEMVSFLLSH- 545
           Y    +   +I  L + LGA+V        T L   C   S        +++V  L+ + 
Sbjct: 43  YLQRDSPSTDIVKLFINLGANVNGLDNEYSTPL---CTILSNIKDYKHMLDIVKILIENG 99

Query: 546 IGVNLQDNKGCTPLHCAIVG---NQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMI 602
             +N +++ G TPL+C +     N LE+   +I + AD T+   D               
Sbjct: 100 ADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKD--------------- 144

Query: 603 TYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYD 662
                          G T L V +               +ID                  
Sbjct: 145 ---------------GFTMLQVYLQSNH-----------HID------------------ 160

Query: 663 KRLDLVEILLEANADVNLGDGT--YTPLYTALMKDPS---LDIIKMLVKYGADVNLTNEA 717
             ++++++LLE   D+N  +    Y  L+     +      DI+K+ V  G  +N  N++
Sbjct: 161 --IEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKS 218

Query: 718 -----CYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLK 772
                  Y+  L Y + R    +I  F+      DI   +      L ++   NN  + +
Sbjct: 219 HKKKFMEYLNSLLYDNKRFK-KNILDFIFSYI--DINQVDELGFNPLYYSVSHNNRKIFE 275

Query: 773 FLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHT---- 828
           +LL+ G D +I+     + L ++       I +++L      N  TI +    L      
Sbjct: 276 YLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNK--KPNKNTISYTYYKLRKHILN 333

Query: 829 --AAFHNQL--DIIKLLLKY 844
               F NQL  DIIK  + Y
Sbjct: 334 VEGDFINQLEFDIIKKFIAY 353

Length = 489

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 41.6 bits (98), Expect = 0.002
 Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 31/134 (23%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLA-------IEKSRN------RTALHVAAIVESVD 306
           T LH A    + E+VKLLLE+GA+  A       ++           + L+ AA + S  
Sbjct: 130 TALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPS 189

Query: 307 IVKLLFDYGAEKSVNVQNVAGLTPLHI------------ACRRKCLEIVKILLDKGADIN 354
           IV LL +  A   +   +  G T LH+                +       LLDK  D  
Sbjct: 190 IVALLSEDPA--DILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSK 247

Query: 355 SG----NDDGCTPL 364
                 N  G TPL
Sbjct: 248 ELEVILNHQGLTPL 261

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQN 324
            T LH+AA    +++VKLL + GA   VN ++
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGA--DVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 15/26 (57%), Positives = 20/26 (76%)

Query: 259 DTPLHSAILNSDIELVKLLLEKGANP 284
            TPLH A  N ++E+VKLLL+KGA+ 
Sbjct: 3   RTPLHLAAENGNLEVVKLLLDKGADI 28

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional

 Score = 41.1 bits (96), Expect = 0.002
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 6/117 (5%)

Query: 252 SRRIIETDTPLHSAILNSDIELVKLLLEKGANPLA---IEKSRNRTALHVAAIVESVDIV 308
            +  I     L+S+I     +++  +L+ GA+P A   + ++     L  A   ++ D  
Sbjct: 27  KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAA 86

Query: 309 KLLFDYGAEKSVNV-QNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPL 364
           KLL  YGA+  VN     A +TPL+I+    CL+ ++ILL  GADIN   +D  TP+
Sbjct: 87  KLLIRYGAD--VNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPI 141

Length = 300

>gnl|CDD|222925 PHA02743, PHA02743, Viral ankyrin protein; Provisional

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 13/113 (11%)

Query: 793 LSSCRQG-LYEIVDTLLEYNADTNL--RTIKHGSTALHTAAFH---NQLDIIKLLLKYNA 846
           L  CR G +YE+++     + D +L  R   HG    H  A++   N +  I+LL+   A
Sbjct: 25  LRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGA 84

Query: 847 DINA-EDKYGKIAFHSACQAKNWDIVTFL-----LDAG-SNIEKATKYRMTFE 892
           DINA E   G    H A   KN+++  +L     ++ G  N +  T Y + ++
Sbjct: 85  DINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYK 137

Length = 166

>gnl|CDD|165231 PHA02917, PHA02917, ankyrin-like protein; Provisional

 Score = 41.5 bits (97), Expect = 0.002
 Identities = 24/77 (31%), Positives = 48/77 (62%), Gaps = 2/77 (2%)

Query: 471 LAMVNYLVKHI-DINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHV 529
           L+ +N  + ++ DIN  +  G+T ++ A++ N   + +LLL+ G+DV ++  + +TC+ +
Sbjct: 432 LSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAI 491

Query: 530 AC-EFASIEMVSFLLSH 545
           A  E  +IE++  LL H
Sbjct: 492 AINESRNIELLKMLLCH 508

Length = 661

>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional

 Score = 40.7 bits (95), Expect = 0.003
 Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 21/207 (10%)

Query: 769 DLLKFLLKAGADPDI----LDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGST 824
           D++  +LK GADP+      +   T+PL+ +      +    L+ Y AD N    +   T
Sbjct: 47  DIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKIT 106

Query: 825 ALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG-SNIEK 883
            L+ +  H  L  +++LL Y ADIN +          A    N  +   + D   SN  K
Sbjct: 107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDNEISNFYK 166

Query: 884 A-TKYRMTFESSKVVEKHVAKLRAANIYV------------DKNIMVQFLTTQVNDFYEE 930
              K  + F+  K++  H   L+A+N  +            +KN  +   +  +  F + 
Sbjct: 167 HPKKILINFDILKILVSHFI-LQASNDRLNEKHNKNFNAGYNKNKHLIIQSIILKQFKDL 225

Query: 931 CLREVALLKCEKPGD--QEKVSFYDIL 955
           C+ ++ ++K  K GD   + +SF+DIL
Sbjct: 226 CIDDIDIMKNIKLGDDSNDMLSFFDIL 252

Length = 300

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 39.8 bits (92), Expect = 0.004
 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 7/127 (5%)

Query: 766 NNLDLLKFLLKAGADPDILDLKDTSPL-LSSCRQGLYEIVDTLLEYNADTNLRTI-KHGS 823
               LL  LL   +            L L         + + LL+   D +L      G 
Sbjct: 15  FLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGR 74

Query: 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSAC-----QAKNWDIVTFLLDAG 878
             LH+AA      I+KLLL   AD+NA+D  G    H A         N ++   LL+AG
Sbjct: 75  LPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAG 134

Query: 879 SNIEKAT 885
           ++++   
Sbjct: 135 ADLDVNN 141

Length = 235

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 508 LLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCA 562
           LL     D+     +  T LH+A ++ ++E+V +LL   + +NL+D+ G T L  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 40.8 bits (96), Expect = 0.004
 Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 35/146 (23%)

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNF-------TCLH--------VACEFA 534
           G T ++ A    + EI  LLL+ GA V  +   +F          +         AC   
Sbjct: 128 GITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAAC-LG 186

Query: 535 SIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFN----------------HLINS 577
           S  +V+ L      +   D+ G T LH  ++ N+ +                    L +S
Sbjct: 187 SPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDS 246

Query: 578 NA--DITMYKNDSPLHLACATGNMDM 601
                I  ++  +PL LA   G + +
Sbjct: 247 KELEVILNHQGLTPLKLAAKEGRIVL 272

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1011
KOG4177|consensus	1143		100.0
KOG4177|consensus	1143		100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
KOG0510|consensus	929		100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
KOG0510|consensus	929		100.0
KOG0508|consensus	615		100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
KOG4369|consensus	2131		100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02795	437	ankyrin-like protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		99.98
KOG0509|consensus	600		99.96
KOG0509|consensus	600		99.96
KOG4369|consensus	2131		99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.94
PHA02795	437	ankyrin-like protein; Provisional	99.94
PHA02884	300	ankyrin repeat protein; Provisional	99.93
PHA02859	209	ankyrin repeat protein; Provisional	99.93
KOG0502|consensus	296		99.92
KOG0502|consensus	296		99.92
KOG0507|consensus	854		99.9
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.9
KOG0507|consensus	854		99.89
KOG0514|consensus	452		99.88
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.87
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.87
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.86
KOG0505|consensus	527		99.85
KOG0505|consensus	527		99.85
PHA02743	166	Viral ankyrin protein; Provisional	99.84
KOG0514|consensus	452		99.82
PHA02743	166	Viral ankyrin protein; Provisional	99.8
PHA02741	169	hypothetical protein; Provisional	99.8
PHA02736	154	Viral ankyrin protein; Provisional	99.79
PHA02884	300	ankyrin repeat protein; Provisional	99.78
KOG0512|consensus	228		99.78
KOG0512|consensus	228		99.76
PHA02741	169	hypothetical protein; Provisional	99.75
PHA02736	154	Viral ankyrin protein; Provisional	99.71
KOG0195|consensus	448		99.7
KOG3676|consensus	782		99.7
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.66
KOG0195|consensus	448		99.65
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.63
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.58
KOG4214|consensus	117		99.57
KOG3676|consensus	782		99.56
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.53
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.41
KOG4214|consensus	117		99.4
KOG1710|consensus	396		99.38
KOG0515|consensus	752		99.36
KOG1710|consensus	396		99.36
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.3
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.29
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.28
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.28
KOG0515|consensus	752		99.27
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.22
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.22
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.2
KOG0818|consensus	669		98.63
KOG0782|consensus	1004		98.63
KOG0506|consensus	622		98.6
PF13606	30	Ank_3: Ankyrin repeat	98.59
KOG0783|consensus	1267		98.54
KOG0783|consensus	1267		98.53
PF13606	30	Ank_3: Ankyrin repeat	98.5
KOG0506|consensus	622		98.45
KOG0818|consensus	669		98.44
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.44
KOG0782|consensus	1004		98.42
KOG0705|consensus	749		98.36
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.34
KOG0705|consensus	749		98.24
KOG3609|consensus	822		98.17
KOG3609|consensus	822		98.13
KOG0511|consensus	516		98.08
KOG0522|consensus	560		98.0
KOG0522|consensus	560		97.95
KOG2384|consensus	223		97.86
KOG0521|consensus	785		97.85
KOG2384|consensus	223		97.85
KOG0511|consensus	516		97.83
KOG0521|consensus	785		97.61
KOG0520|consensus	975		97.42
KOG0520|consensus	975		97.39
PLN03077	857	Protein ECB2; Provisional	96.93
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	96.63
KOG2505|consensus	591		96.32
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.91
PLN03077	857	Protein ECB2; Provisional	95.85
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.63
KOG2505|consensus	591		95.59
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.44
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	95.11
KOG3911|consensus	378		94.06
PLN03081	697	pentatricopeptide (PPR) repeat-containing protein;	93.56
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	93.14
PLN03081	697	pentatricopeptide (PPR) repeat-containing protein;	92.2
PLN03218	1060	maturation of RBCL 1; Provisional	90.87
PLN03218	1060	maturation of RBCL 1; Provisional	90.54
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	90.08
KOG3911|consensus	378		84.37
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	83.96

>KOG4177|consensus

Probab=100.00  E-value=9.3e-66  Score=601.43  Aligned_cols=623  Identities=32%  Similarity=0.444  Sum_probs=519.6

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCc
Q psy8109         215 YKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRT  294 (1011)
Q Consensus       215 ~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t  294 (1011)
                      .-+|+.||++|+.+.+..|++.....+....           .+.||+|+|+-.|+.+++++|+..|+.++..... |.|
T Consensus        22 ~~~l~~a~r~~~~~~~~~l~~~e~~~~~~sk-----------~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~-~~~   89 (1143)
T KOG4177|consen   22 LPALHIAARNDDTNAAKLLLQNEHNADVDSK-----------SGFTPLHIAAHYGNENVAELLLNRGAIVNATARN-GIT   89 (1143)
T ss_pred             chHHHHHHhccchhhcccccccccccchhcc-----------cccCHHHHHhhhhhhhhhhhhhccccccCccccc-Ccc
Confidence            3568888888888888888876554443333           6678888888888888888888888887766665 788


Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChh
Q psy8109         295 ALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE  374 (1011)
Q Consensus       295 ~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~  374 (1011)
                      |||.|+..|+.++++.|+..|+  .++..+.+|.||||.|+..|+.+++.+|+..|++++.++..|.||+++|+.   ..
T Consensus        90 plh~a~~~~~a~~v~~ll~~ga--~~~~~~~~~lTpLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~---~~  164 (1143)
T KOG4177|consen   90 PLHVASKRGDAEMVKLLLCRGA--QIDARDRDGLTPLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQ---VA  164 (1143)
T ss_pred             HHHHHHhhcchhHHHHHHhccC--chhhcccCCCcchhhhcccccHHHHHHHHHccCCCcccccCCCCchhhhcc---hh
Confidence            8888888888888888888888  677788888888888888888888888888888888888888888888877   66


Q ss_pred             HHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCccc
Q psy8109         375 VFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKA  453 (1011)
Q Consensus       375 iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~  453 (1011)
                      .+.+|.++-.     .... +++.|+..++.++++.++... +.+..+..+.||+|.++.. ...+++++++.+|+++..
T Consensus       165 ~~~ll~~~~~-----~d~l-~~~~~~~~~~~~~~~ll~~~~~~~~a~~~~~~tpl~~a~~~-nri~~~eLll~~gadv~a  237 (1143)
T KOG4177|consen  165 CARLLLEYKA-----PDYL-RLHVAAHCGHARVAKLLLDKKADPNASALNGFTPLHIACKK-NRIKVVELLLKHGADVSA  237 (1143)
T ss_pred             hhHHhhhccc-----chhh-hhhHHhhcchHHHHhhhhcccCCccccccCCCCchhhhccc-cccceeeeeeeccCcCCc
Confidence            6677766655     1112 667788888888888887765 6777777777777774433 367777777777777777


Q ss_pred             ccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHH
Q psy8109         454 KLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACE  532 (1011)
Q Consensus       454 ~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~  532 (1011)
                      .+..|.+|||.|+..|+++++.+|+. ++.++..+..|.||+|.|+..+..++.++|+++|+++........||++.|..
T Consensus       238 ~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~  317 (1143)
T KOG4177|consen  238 KDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASR  317 (1143)
T ss_pred             ccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhcc
Confidence            77777777777777777777777777 67777777777777777777777777777777777777777777777777777


Q ss_pred             hCCHHHHHHHHhc-cCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccc
Q psy8109         533 FASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDV  611 (1011)
Q Consensus       533 ~g~~~iv~~Ll~~-~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~  611 (1011)
                      .|+.+++.+++.. ...+..+..+.+|+|.++..++.++..++...+..                              .
T Consensus       318 ~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~------------------------------~  367 (1143)
T KOG4177|consen  318 LGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQ------------------------------R  367 (1143)
T ss_pred             cchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccc------------------------------c
Confidence            7777777777776 66667777777777777777777766666655543                              2


Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHH
Q psy8109         612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYT  690 (1011)
Q Consensus       612 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~  690 (1011)
                      ...+..+.||+|.|+..|..+++++++. .|++++.....|.||||.|+..++..+++.++++|++++..+. +.|++|.
T Consensus       368 ~~a~~k~~~pl~la~~~g~~~~v~Lll~-~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhv  446 (1143)
T KOG4177|consen  368 RQAEEKGFTPLHLAVKSGRVSVVELLLE-AGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHV  446 (1143)
T ss_pred             CcccccCCcchhhhcccCchhHHHhhhh-ccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhh
Confidence            3456678899999999999999999998 8999999999999999999999999999999999999998887 8999999


Q ss_pred             HHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHH
Q psy8109         691 ALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDL  770 (1011)
Q Consensus       691 aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~i  770 (1011)
                      ++......++...+++.|.+++.....  |.||||.|+..|+ .++++.|++. ++..+.....+-+++|.|...+...+
T Consensus       447 aa~~g~~~~~~~~l~~~g~~~n~~s~~--G~T~Lhlaaq~Gh-~~~~~llle~-~~~~~~~~~~~l~~lhla~~~~~v~~  522 (1143)
T KOG4177|consen  447 AAKKGRYLQIARLLLQYGADPNAVSKQ--GFTPLHLAAQEGH-TEVVQLLLEG-GANDNLDAKKGLTPLHLAADEDTVKV  522 (1143)
T ss_pred             hhhcccHhhhhhhHhhcCCCcchhccc--cCcchhhhhccCC-chHHHHhhhc-CCccCccchhccchhhhhhhhhhHHH
Confidence            998333888899999999999999888  9999999999999 9999999998 78888888899999999999999999


Q ss_pred             HHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCccc
Q psy8109         771 LKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINA  850 (1011)
Q Consensus       771 v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~  850 (1011)
                      ++.++++|++++.++..|.||||.|+..|+..+|++|+++|++++. .++.|+||||.||..|+.+|+.+|+++|+++|.
T Consensus       523 ~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~a-k~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna  601 (1143)
T KOG4177|consen  523 AKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNA-KDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA  601 (1143)
T ss_pred             HHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccc-cCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc
Confidence            9999999999999999999999999999999999999999999998 669999999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHcCCHHHHHHHHhcCCC-----cccccccCCCHHhhHHh
Q psy8109         851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSN-----IEKATKYRMTFESSKVV  897 (1011)
Q Consensus       851 ~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~-----~~~~~~~g~t~l~~a~~  897 (1011)
                      .|.+|.|||++|++.|+++++++|+..|++     +...+.+|.+|...+..
T Consensus       602 ~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~  653 (1143)
T KOG4177|consen  602 ADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEE  653 (1143)
T ss_pred             ccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHH
Confidence            999999999999999999999999999999     66678889999887654

>KOG4177|consensus

Probab=100.00  E-value=6e-65  Score=594.68  Aligned_cols=599  Identities=33%  Similarity=0.464  Sum_probs=538.7

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCc
Q psy8109         260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKC  339 (1011)
Q Consensus       260 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~  339 (1011)
                      .+||.|+.+|+.+.++.|++...+....+.+ +.||+|+|+..|+.+++++|+..++  .++.....|.||||.|+..|+
T Consensus        23 ~~l~~a~r~~~~~~~~~l~~~e~~~~~~sk~-~~~pl~~aa~~~~~~v~~~ll~~~a--~v~~~~~~~~~plh~a~~~~~   99 (1143)
T KOG4177|consen   23 PALHIAARNDDTNAAKLLLQNEHNADVDSKS-GFTPLHIAAHYGNENVAELLLNRGA--IVNATARNGITPLHVASKRGD   99 (1143)
T ss_pred             hHHHHHHhccchhhcccccccccccchhccc-ccCHHHHHhhhhhhhhhhhhhcccc--ccCcccccCccHHHHHHhhcc
Confidence            4699999999999999999988777666664 9999999999999999999999999  789999999999999999999


Q ss_pred             HHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhccCcc
Q psy8109         340 LEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHININ  418 (1011)
Q Consensus       340 ~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~  418 (1011)
                      .+++++|+..|+.++..+..|.||||.|+..|+.+++++|+.+|++++.. ..+.||+++|+.   ...+++++++.   
T Consensus       100 a~~v~~ll~~ga~~~~~~~~~lTpLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~---~~~~~ll~~~~---  173 (1143)
T KOG4177|consen  100 AEMVKLLLCRGAQIDARDRDGLTPLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQ---VACARLLLEYK---  173 (1143)
T ss_pred             hhHHHHHHhccCchhhcccCCCcchhhhcccccHHHHHHHHHccCCCcccccCCCCchhhhcc---hhhhHHhhhcc---
Confidence            99999999999999999999999999999999999999999999988877 777889998887   55666665441   


Q ss_pred             CCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHH
Q psy8109         419 HQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFA  497 (1011)
Q Consensus       419 ~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A  497 (1011)
                                                    .      .+-. +++.|+..++.+++++++. ..+.+..+..+.||+|.|
T Consensus       174 ------------------------------~------~d~l-~~~~~~~~~~~~~~~ll~~~~~~~~a~~~~~~tpl~~a  216 (1143)
T KOG4177|consen  174 ------------------------------A------PDYL-RLHVAAHCGHARVAKLLLDKKADPNASALNGFTPLHIA  216 (1143)
T ss_pred             ------------------------------c------chhh-hhhHHhhcchHHHHhhhhcccCCccccccCCCCchhhh
Confidence                                          1      0112 5677788888888888877 677777888888888888


Q ss_pred             HHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc-cCCCCCCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy8109         498 IKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLIN  576 (1011)
Q Consensus       498 ~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~  576 (1011)
                      +..+..+++++++.+|+++...+..|.+|+|.|+..|+++++.+++.+ +.++..+..+.||+|.|+..+..+++++|++
T Consensus       217 ~~~nri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~  296 (1143)
T KOG4177|consen  217 CKKNRIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQ  296 (1143)
T ss_pred             ccccccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhc
Confidence            888888888888888888888888888888888888888888888888 7778888888888888888888888888888


Q ss_pred             CCCCccccCC--CCHHHHHHHcCChhhHHHHHh-hccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCC
Q psy8109         577 SNADITMYKN--DSPLHLACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGS  653 (1011)
Q Consensus       577 ~~~~~~~~~~--~t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~  653 (1011)
                      .|+++.....  .+++++|...|..+++.++++ +...+..+..|.+|+|.++..++.++..+|.. .+..-...+..+.
T Consensus       297 ~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~-~~~~~~~a~~k~~  375 (1143)
T KOG4177|consen  297 NGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLE-HGAQRRQAEEKGF  375 (1143)
T ss_pred             cCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhc-cccccCcccccCC
Confidence            8888765543  388888888888888888888 77788889999999999999999998888887 7777788889999


Q ss_pred             cHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCC
Q psy8109         654 TALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD  732 (1011)
Q Consensus       654 t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~  732 (1011)
                      ||++.|+..|+.+++++++.+|++++.... +.||+|.++. .++..+++.++++|++++..+..  |.||+|+|+..|.
T Consensus       376 ~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~-~~~~~~v~l~l~~gA~~~~~~~l--G~T~lhvaa~~g~  452 (1143)
T KOG4177|consen  376 TPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAH-YGNPRVVKLLLKRGASPNAKAKL--GYTPLHVAAKKGR  452 (1143)
T ss_pred             cchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhh-ccCcceEEEEeccCCChhhHhhc--CCChhhhhhhccc
Confidence            999999999999999999999999998887 9999999999 99999999999999999999888  9999999999995


Q ss_pred             HHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCC
Q psy8109         733 CNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNA  812 (1011)
Q Consensus       733 ~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~  812 (1011)
                      ..++...++.. |+++|.....|.||||+|++.|+.++++.|++.++..+.....+.+++|.|...+...+++.++++|+
T Consensus       453 ~~~~~~~l~~~-g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga  531 (1143)
T KOG4177|consen  453 YLQIARLLLQY-GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGA  531 (1143)
T ss_pred             HhhhhhhHhhc-CCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCC
Confidence            37777777777 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHH
Q psy8109         813 DTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFE  892 (1011)
Q Consensus       813 ~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l  892 (1011)
                      +++. ++..|+||||.|+..|+.++|++|+++|+|++.+|+.|+||||.||..|+.+|+.+|+++||++|..|.+|.|||
T Consensus       532 ~v~~-~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL  610 (1143)
T KOG4177|consen  532 NVDL-RTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPL  610 (1143)
T ss_pred             ceeh-hcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchh
Confidence            9998 788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHhhCCHHHHHHhhhc
Q psy8109         893 SSKVVEKHVAKLRAANIY  910 (1011)
Q Consensus       893 ~~a~~~~~~~~~~~~~~~  910 (1011)
                      ++|.+.|+.++++.+...
T Consensus       611 ~iA~~lg~~~~~k~l~~~  628 (1143)
T KOG4177|consen  611 HIAVRLGYLSVVKLLKVV  628 (1143)
T ss_pred             HHHHHhcccchhhHHHhc
Confidence            999999999999987554

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.1e-56  Score=544.53  Aligned_cols=466  Identities=26%  Similarity=0.336  Sum_probs=303.4

Q ss_pred             ChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHH
Q psy8109         459 TTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIE  537 (1011)
Q Consensus       459 ~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~  537 (1011)
                      .++++.|+..|+.+++++|++ +++++..+..|.||||+|+..|+.++|++|+++|++++..+..|.|            
T Consensus       146 ~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t------------  213 (682)
T PHA02876        146 MKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLS------------  213 (682)
T ss_pred             hHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCC------------
Confidence            345555555666666666655 5555555555666666666666666666666666555554444444            


Q ss_pred             HHHHHHhccCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCC
Q psy8109         538 MVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDI  617 (1011)
Q Consensus       538 iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~  617 (1011)
                                          ||+.|+..|+.+++++|++.+.++..                                  
T Consensus       214 --------------------~L~~A~~~~~~~ivk~Ll~~~~~~~~----------------------------------  239 (682)
T PHA02876        214 --------------------VLECAVDSKNIDTIKAIIDNRSNINK----------------------------------  239 (682)
T ss_pred             --------------------HHHHHHHcCCHHHHHHHHhcCCCCCC----------------------------------
Confidence                                44445555555555555444433211                                  


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCH-HHHHHHHHCCCCCcCCCC-CCcHHHHHHHcC
Q psy8109         618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRL-DLVEILLEANADVNLGDG-TYTPLYTALMKD  695 (1011)
Q Consensus       618 g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~-~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~  695 (1011)
                      +.++++.|+..++.+++++|++ .|++++..+..|.||||+|+..++. +++++|++.|++++..+. +.||||.|+...
T Consensus       240 ~~~~L~~ai~~~~~~~~~~Ll~-~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g  318 (682)
T PHA02876        240 NDLSLLKAIRNEDLETSLLLYD-AGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNG  318 (682)
T ss_pred             CcHHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC
Confidence            1123444444444444444444 4444444444444444444444443 344444444444444443 445555444422


Q ss_pred             CCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHH
Q psy8109         696 PSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLL  775 (1011)
Q Consensus       696 ~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll  775 (1011)
                      ...+++++|+..|++++..+..  |.||||+|+..+...+++++|++. |++++.+|..|.||||+|+..|+.+++++|+
T Consensus       319 ~~~~~v~~Ll~~gadin~~d~~--g~TpLh~A~~~~~~~~iv~lLl~~-gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll  395 (682)
T PHA02876        319 YDTENIRTLIMLGADVNAADRL--YITPLHQASTLDRNKDIVITLLEL-GANVNARDYCDKTPIHYAAVRNNVVIINTLL  395 (682)
T ss_pred             CCHHHHHHHHHcCCCCCCcccC--CCcHHHHHHHhCCcHHHHHHHHHc-CCCCccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            2455555555555555555554  788888888765547888888877 8888888889999999999999999999999


Q ss_pred             HCCCCCCCCCcCCCCcccccccCC-hHHHHHHHHHcCCCccccccCCCChHHHHHHHcC-CHHHHHHHHhccCCcccccC
Q psy8109         776 KAGADPDILDLKDTSPLLSSCRQG-LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHN-QLDIIKLLLKYNADINAEDK  853 (1011)
Q Consensus       776 ~~gad~~~~d~~g~t~L~~A~~~g-~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g-~~~iv~~Ll~~ga~in~~d~  853 (1011)
                      +.|++++..+..|.||||+|+..+ ...++++|+++|++++. .+..|+||||+|+..| +.+++++|+++|+++|.+|.
T Consensus       396 ~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~-~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~  474 (682)
T PHA02876        396 DYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNS-KNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINI  474 (682)
T ss_pred             HCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCc-CCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCC
Confidence            999999988888899999987655 45678899999999887 7788999999998876 68999999999999999999


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCCCccccc------ccCCCHHhhHHhhCCHHHHHHhhhccC--c------------
Q psy8109         854 YGKIAFHSACQAKNWDIVTFLLDAGSNIEKAT------KYRMTFESSKVVEKHVAKLRAANIYVD--K------------  913 (1011)
Q Consensus       854 ~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~------~~g~t~l~~a~~~~~~~~~~~~~~~~~--~------------  913 (1011)
                      .|.|||++|+..+  .+|++|+.+|+++....      .++.....+....  ..........+.  .            
T Consensus       475 ~g~tpl~~a~~~~--~~v~~Ll~~~a~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  550 (682)
T PHA02876        475 QNQYPLLIALEYH--GIVNILLHYGAELRDSRVLHKSLNDNMFSFRYIIAH--ICIQDFIRHDIRNEVNPLKRVPTRFTS  550 (682)
T ss_pred             CCCCHHHHHHHhC--CHHHHHHHCCCCCCcCcchHHHhcccHHHHHHHHHH--HHHHHHHHHHHhhhccccccccchhhh
Confidence            9999999998766  47888999988775321      0111111111111  111011100000  0            


Q ss_pred             ----chhhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhH--hhcCchhHHHhhhchhhhhcccccccccccccc
Q psy8109         914 ----NIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDI--LSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIY  987 (1011)
Q Consensus       914 ----~~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  987 (1011)
                          +..+....+.+..+..+|..||..|+.+++++   .+.+|+  ..++.+.+.+|..+|.+..+..|.     ||+|
T Consensus       551 ~~~~~~~~I~~~~~l~~~~~~C~~ei~~mk~~~i~~---~~~ld~~~~~~~~~~l~~~~~~~~i~~~~~~~-----f~iY  622 (682)
T PHA02876        551 LRESFKEIIQSDDTFKRIWLRCKEELKDISKIRINM---FYSLDIFIISKNMNLLHHLVNNPIIKEINTWH-----FCNY  622 (682)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHHhhheeecc---eeehHHHHhhhhHHHHHHHhhhHHHHHhhHHH-----hHHH
Confidence                00112223567788899999999999999985   455554  367888899999999999987666     9999


Q ss_pred             ccccchhHHHHHHHhhhhhc
Q psy8109         988 GDVICCKFTKVLNSLKNKNK 1007 (1011)
Q Consensus       988 ~~~~~~~~~~~~~~~~~~~~ 1007 (1011)
                      ++.|...+....+|-+.=++
T Consensus       623 ~~~i~~~I~~~~~R~~~l~~  642 (682)
T PHA02876        623 GDRLKTSISLASDRHEILEK  642 (682)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998765433

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=7.1e-53  Score=494.01  Aligned_cols=567  Identities=18%  Similarity=0.191  Sum_probs=359.0

Q ss_pred             HHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhc---CcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChh----HHH
Q psy8109         305 VDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRR---KCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE----VFN  377 (1011)
Q Consensus       305 ~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~---g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~----iv~  377 (1011)
                      ++.|+.|+.++.  .++..|..|.||||+|+..   |+.++|++|+++|++++..+..|.||||+|+..|+.+    +++
T Consensus        12 ~~~~~~l~~~~~--~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~   89 (661)
T PHA02917         12 LDELKQMLRDRD--PNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAM   89 (661)
T ss_pred             HHHHHHHHhccC--cccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHH
Confidence            466777777666  4566677788888876544   6678888888888888777777888888888777743    456


Q ss_pred             HHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc-CccCCCCCCCcHhHH-HHhcCCCHHHHHHHHHcCCCccccc
Q psy8109         378 YLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKL  455 (1011)
Q Consensus       378 ~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~-a~~~~~~~~i~~~Ll~~g~~~~~~~  455 (1011)
                      .|++.+...+.... .+++++|+.+|+.++|++|+++| +++..|..|.||||. ++.+.++.+++++|+++|++++..+
T Consensus        90 ~Ll~~~~~~n~~~~-~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d  168 (661)
T PHA02917         90 ALLEATGYSNINDF-NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYED  168 (661)
T ss_pred             HHHhccCCCCCCCc-chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccc
Confidence            67665433333221 25566677777777777777776 666667777777775 3334457777777777788776443


Q ss_pred             C---CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCCCCcHHHHHHH-----------cCCHHHHHHHHhcCcccccccC
Q psy8109         456 M---DGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIK-----------NNHLEIFNLLLKLGADVAVKMK  521 (1011)
Q Consensus       456 ~---~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~-----------~g~~~iv~~Ll~~ga~~~~~~~  521 (1011)
                      .   .|.+..                     +.....+.||||+|+.           .++.+++++|++.|++++..+.
T Consensus       169 ~~~~~g~~~~---------------------~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~  227 (661)
T PHA02917        169 EDDEYGYAYD---------------------DYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDK  227 (661)
T ss_pred             cccccccccc---------------------cccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCC
Confidence            2   222100                     1112233466666654           3466777777777777777777


Q ss_pred             CCCCHHHHHHHhCCH--HHHHHHHhccCCC----CCCCCCCCHHHHHHh-------c--CCHHHHHHHHhCCCCccccCC
Q psy8109         522 SNFTCLHVACEFASI--EMVSFLLSHIGVN----LQDNKGCTPLHCAIV-------G--NQLEVFNHLINSNADITMYKN  586 (1011)
Q Consensus       522 ~~~t~L~~A~~~g~~--~iv~~Ll~~~~~~----~~~~~g~t~L~~A~~-------~--g~~eiv~~Ll~~~~~~~~~~~  586 (1011)
                      .|.||||+|+..|+.  ++|++|++.++.+    ..+..+.++++.|+.       .  .+.+++++|++.|++.     
T Consensus       228 ~G~TpLh~A~~~g~~~~eivk~Li~g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~-----  302 (661)
T PHA02917        228 NYCTALQYYIKSSHIDIDIVKLLMKGIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPH-----  302 (661)
T ss_pred             CCCcHHHHHHHcCCCcHHHHHHHHhCCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCC-----
Confidence            777777777766663  5666665433222    244455666666652       1  1566777777766531     


Q ss_pred             CCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHH---HHHcC
Q psy8109         587 DSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFF---ACYDK  663 (1011)
Q Consensus       587 ~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~---A~~~g  663 (1011)
                                                     +.++++.++..++.+++.+++...+.+         ++++.   ++..|
T Consensus       303 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~~g  342 (661)
T PHA02917        303 -------------------------------GIMCSIVPLWRNDKETISLILKTMNSD---------VLQHILIEYMTFG  342 (661)
T ss_pred             -------------------------------ceeEeeecccccchHHHHHHHHHhchH---------HHHHHHHHHHHcC
Confidence                                           234455555555666666665422222         22222   22233


Q ss_pred             C--HHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHH
Q psy8109         664 R--LDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLV  741 (1011)
Q Consensus       664 ~--~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll  741 (1011)
                      .  .+++++|+++|++++                                 .++..  |.++.    ...+ .+++++|+
T Consensus       343 ~~~~~~v~~Ll~~GAdvn---------------------------------~~~~~--g~~~~----~~~~-~~~i~~LL  382 (661)
T PHA02917        343 DIDIPLVECMLEYGAVVN---------------------------------KEAIH--GYFRN----INID-SYTMKYLL  382 (661)
T ss_pred             CCcHHHHHHHHHcCCCCC---------------------------------CCCcc--ccchh----hcCC-HHHHHHHH
Confidence            3  335555555555554                                 33332  44432    2333 66777777


Q ss_pred             HhcCCCcccccCCCccHHHHHHhCCC--HHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCcccccc
Q psy8109         742 EECNADITLRNFNNRTALNFAAFGNN--LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTI  819 (1011)
Q Consensus       742 ~~~g~~~~~~~~~g~t~L~~Aa~~g~--~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~  819 (1011)
                      ...|++++..+.+|.||||.|+..++  .+...+...+|          ...  .+...+..++|++|+++|+++|. .+
T Consensus       383 ~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~v~~Ll~~GAdIN~-kd  449 (661)
T PHA02917        383 KKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKG----------LCD--MSYACPILSTINICLPYLKDINM-ID  449 (661)
T ss_pred             HhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhc----------cch--hhhhhhhHHHHHHHHHCCCCCCC-CC
Confidence            65577776667778888888876654  34333322222          222  22334478999999999999998 78


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHH-cCCHHHHHHHHhcCCCcccccccCCCHHhhHHhh
Q psy8109         820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQ-AKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVE  898 (1011)
Q Consensus       820 ~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~-~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~  898 (1011)
                      ..|+||||+|+..++.+++++|+++|+++|.+|..|+|||++|+. .++.+++++|+++|++++....   | +......
T Consensus       450 ~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i~~i~~---t-~~~~~~~  525 (661)
T PHA02917        450 KRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTLDCVID---S-LREISNI  525 (661)
T ss_pred             CCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCChhHHHH---H-HHHHHhh
Confidence            899999999999999999999999999999999999999999996 7889999999999999875432   1 1111110


Q ss_pred             C-CHHHHHHhhhc-cCcc-----hhhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhH-h-hcCchhHHHhhhch
Q psy8109         899 K-HVAKLRAANIY-VDKN-----IMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDI-L-SKHPAQVEFYAKNP  969 (1011)
Q Consensus       899 ~-~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i-~-~~~~~~~~~~~~~~  969 (1011)
                      . ...+++..-.| +...     ...........+|..+|.+||..|+.++++..   +.|++ + .++.+.+-+|.++|
T Consensus       526 ~~~~~~~k~~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~Ce~EI~~Mk~~~i~~~---s~~~i~f~~~~~~~~~r~~~n~  602 (661)
T PHA02917        526 VDNAYAIKQCIKYAMIIDDCTSSKIPESISQRYNDYIDLCNQELNEMKKIMVGGN---TMFSLIFTDHGAKIIHRYANNP  602 (661)
T ss_pred             cchHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHheEECCc---EEEEEEEecCCchHHHHHhCCh
Confidence            0 11222211111 1111     11112234678899999999999999999874   55554 3 34556777899999


Q ss_pred             hhhhccccccccccccccccccchhHHHHHHHhhhh
Q psy8109         970 QISNCVKWKDLNLQFPIYGDVICCKFTKVLNSLKNK 1005 (1011)
Q Consensus       970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1011)
                      .|.++...+    .|+||+..+ ..+...++|=+.-
T Consensus       603 ~i~k~~~~~----~~~iY~~~~-~~I~~~~~R~~~i  633 (661)
T PHA02917        603 ELRAYYESK----QNKIYVEAY-DIISNAIVKHNKI  633 (661)
T ss_pred             HHHHHhhcc----cceeeHHHH-HHHHHHHHHHHHH
Confidence            998865443    589999987 4577666665443

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.1e-49  Score=478.30  Aligned_cols=484  Identities=26%  Similarity=0.320  Sum_probs=342.1

Q ss_pred             HHHHHHcCCH-HHHHH-----HHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHH
Q psy8109         262 LHSAILNSDI-ELVKL-----LLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIAC  335 (1011)
Q Consensus       262 L~~A~~~g~~-~iv~~-----Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa  335 (1011)
                      |+.|+..|+. +++..     |+.+|++....... +.||||.|+..||.++|+.|++.++. .++..|..|.||||+|+
T Consensus         6 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~LH~A~~~g~~e~V~~ll~~~~~-~~~~~~~~~~tpLh~a~   83 (682)
T PHA02876          6 LYRIMCRGNCIDILSAIDNYDLHKHGANQCENESI-PFTAIHQALQLRQIDIVEEIIQQNPE-LIYITDHKCHSTLHTIC   83 (682)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHhhhhhhhcccccc-cchHHHHHHHHHhhhHHHHHHHhCcc-cchhhchhhcccccccc
Confidence            6666666765 33333     33456665555443 88999999999999999999988773 35677788999999998


Q ss_pred             hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109         336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI  415 (1011)
Q Consensus       336 ~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~  415 (1011)
                      ..++.  +..++......+.....+.+.+..+.......++..|-+...        ...++++...+..+.+..|.   
T Consensus        84 ~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~--------~~~~~~~~~~~~~~~~~~l~---  150 (682)
T PHA02876         84 IIPNV--MDIVISLTLDCDIILDIKYASIILNKHKLDEACIHILKEAIS--------GNDIHYDKINESIEYMKLIK---  150 (682)
T ss_pred             CCCCc--cccccccccchhhcccccHHHHHHHHHHHHHHHHHHHHHHhc--------CCcccHHhhccchhhhHHHH---
Confidence            88874  333333222222233344445444433333333333322211        12344444444444333332   


Q ss_pred             CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHH
Q psy8109         416 NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPI  494 (1011)
Q Consensus       416 ~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L  494 (1011)
                                    .+.. .++.+++++|++.|++++..+..|.||||+|+..|+.++|++|++ +++++..+..|.|||
T Consensus       151 --------------~~i~-~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L  215 (682)
T PHA02876        151 --------------ERIQ-QDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVL  215 (682)
T ss_pred             --------------HHHH-CCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHH
Confidence                          2221 247888888889999999999999999999999999999999999 889999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhccCCCCCCCCCCCHHHHHHhcCCHHHHHHH
Q psy8109         495 YFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHL  574 (1011)
Q Consensus       495 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~L  574 (1011)
                      +.|+..|+.+++++|++.+.+++.    +.+                                +++.|+..++.+++++|
T Consensus       216 ~~A~~~~~~~ivk~Ll~~~~~~~~----~~~--------------------------------~L~~ai~~~~~~~~~~L  259 (682)
T PHA02876        216 ECAVDSKNIDTIKAIIDNRSNINK----NDL--------------------------------SLLKAIRNEDLETSLLL  259 (682)
T ss_pred             HHHHHcCCHHHHHHHHhcCCCCCC----CcH--------------------------------HHHHHHHcCCHHHHHHH
Confidence            999999999999999998766532    122                                45555555666666666


Q ss_pred             HhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCH-HHHHHHHhhCCCCcccCCCCCC
Q psy8109         575 INSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCL-EAVKFLLNTKNIDVNHKTKDGS  653 (1011)
Q Consensus       575 l~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~-~iv~~Ll~~~g~~~~~~~~~g~  653 (1011)
                      ++.|+++                              +..+..|.||||.|+..|+. +++++|++ .|++++..+..|.
T Consensus       260 l~~g~~v------------------------------n~~d~~g~TpLh~Aa~~~~~~~iv~lLl~-~gadin~~d~~g~  308 (682)
T PHA02876        260 YDAGFSV------------------------------NSIDDCKNTPLHHASQAPSLSRLVPKLLE-RGADVNAKNIKGE  308 (682)
T ss_pred             HHCCCCC------------------------------CCCCCCCCCHHHHHHhCCCHHHHHHHHHH-CCCCCCCcCCCCC
Confidence            6655543                              23344566677777766665 46666666 6777777777777


Q ss_pred             cHHHHHHHcC-CHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCC
Q psy8109         654 TALFFACYDK-RLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRG  731 (1011)
Q Consensus       654 t~L~~A~~~g-~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g  731 (1011)
                      ||||+|+..| ..+++++|+..|++++..+. +.||||.|+...+..+++++|++.|++++..+..  |.||||+|+..|
T Consensus       309 TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~--G~TpLh~Aa~~~  386 (682)
T PHA02876        309 TPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYC--DKTPIHYAAVRN  386 (682)
T ss_pred             CHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCC--CCCHHHHHHHcC
Confidence            7777777766 46777777777777776665 6677777776556677777777777777777666  888888888888


Q ss_pred             CHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC-HHHHHHHHHCCCCCCCCCcCCCCcccccccCC-hHHHHHHHHH
Q psy8109         732 DCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN-LDLLKFLLKAGADPDILDLKDTSPLLSSCRQG-LYEIVDTLLE  809 (1011)
Q Consensus       732 ~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~-~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g-~~~iv~~Ll~  809 (1011)
                      + .+++++|++. |++++..+..|.||||+|+..++ ..++++|++.|++++.+|..|.||||+|+..| +.+++++|++
T Consensus       387 ~-~~iv~~Ll~~-gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~  464 (682)
T PHA02876        387 N-VVIINTLLDY-GADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLD  464 (682)
T ss_pred             C-HHHHHHHHHC-CCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHH
Confidence            8 8888888887 88888888888888888877655 46688888888888888888888888888765 6788888888


Q ss_pred             cCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcc
Q psy8109         810 YNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN  849 (1011)
Q Consensus       810 ~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in  849 (1011)
                      +|++++. .+..|.|||+.|+.++  ++++.|+.+|+++.
T Consensus       465 ~Gad~n~-~d~~g~tpl~~a~~~~--~~v~~Ll~~~a~~~  501 (682)
T PHA02876        465 NGADVNA-INIQNQYPLLIALEYH--GIVNILLHYGAELR  501 (682)
T ss_pred             CCCCCCC-CCCCCCCHHHHHHHhC--CHHHHHHHCCCCCC
Confidence            8888887 7778888888888765  57888888887764

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.1e-47  Score=432.68  Aligned_cols=526  Identities=18%  Similarity=0.232  Sum_probs=385.7

Q ss_pred             CHHHHHHHHHcCCCcc-cccCCCChHHHHHHHcC---CHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcC--CHHHHHHH
Q psy8109         437 SLEVFHSIIEAGADIK-AKLMDGTTALHLACYFG---NLAMVNYLVK-HIDINSENDLGKTPIYFAIKNN--HLEIFNLL  509 (1011)
Q Consensus       437 ~~~i~~~Ll~~g~~~~-~~~~~g~t~L~~Aa~~g---~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g--~~~iv~~L  509 (1011)
                      ....+++.++..++++ ..+..|.||||+|+.+|   +.++|++|++ |++++..|..|.||||+|+..+  +.+++++|
T Consensus        19 ~~~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~L   98 (672)
T PHA02730         19 TYKKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLL   98 (672)
T ss_pred             hHHHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHH
Confidence            5677888888887887 77888999999999987   5999999999 8999999999999999999866  79999999


Q ss_pred             HhcCccc--ccccCCCCCHHHHHHH--hCCHHHHHHHHhc--cCCCCCC-----CCCCCHHHHHHhcCCHHHHHHHHhCC
Q psy8109         510 LKLGADV--AVKMKSNFTCLHVACE--FASIEMVSFLLSH--IGVNLQD-----NKGCTPLHCAIVGNQLEVFNHLINSN  578 (1011)
Q Consensus       510 l~~ga~~--~~~~~~~~t~L~~A~~--~g~~~iv~~Ll~~--~~~~~~~-----~~g~t~L~~A~~~g~~eiv~~Ll~~~  578 (1011)
                      ++.|++.  +..+..+.+|++.++.  +++.+++++|+..  ++++...     ..|.+|++.+...++.++|++|+++|
T Consensus        99 l~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g  178 (672)
T PHA02730         99 ISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSE  178 (672)
T ss_pred             HhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcC
Confidence            9996654  6666668889998888  8899999999963  4544332     37889999999999999999999999


Q ss_pred             CCccccCCCCHHHHHHHcCChhhHHHHHhhcccc-ccCCCCCcHHHHH------HHcCCHHHHHHHHhhCCCCcccCCCC
Q psy8109         579 ADITMYKNDSPLHLACATGNMDMITYAMKYFDVN-IENDIGETPLHVA------VSHGCLEAVKFLLNTKNIDVNHKTKD  651 (1011)
Q Consensus       579 ~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~-~~~~~g~t~L~~A------~~~g~~~iv~~Ll~~~g~~~~~~~~~  651 (1011)
                      ++++-..-.                       .. ..+....|.||+.      ..+++.+++++|++ +|+++|.++..
T Consensus       179 ~~v~g~~~~-----------------------~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs-~GadIN~kd~~  234 (672)
T PHA02730        179 CYSTGYVFR-----------------------SCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLID-NNVSIHGRDEG  234 (672)
T ss_pred             Ccccccccc-----------------------cccccCCccchhHHHHHHhhhhhhccCHHHHHHHHH-CCCCCCCCCCC
Confidence            987421000                       01 1111222344422      35678899999999 89999999999


Q ss_pred             CCcHHHH--HHHcCCHHHHHHHHHCCCCCcCCCCCCc-----HHHHHHH-------cCCCHHHHHHHHhCCCCC-Cc---
Q psy8109         652 GSTALFF--ACYDKRLDLVEILLEANADVNLGDGTYT-----PLYTALM-------KDPSLDIIKMLVKYGADV-NL---  713 (1011)
Q Consensus       652 g~t~L~~--A~~~g~~~iv~~Ll~~ga~~~~~~~~~t-----~L~~aa~-------~~~~~~iv~~Ll~~g~~~-~~---  713 (1011)
                      |.||||+  +...|+.+++++|++...+...-+...+     .|+.-..       ..-+.++|++|++.+... .+   
T Consensus       235 G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~  314 (672)
T PHA02730        235 GSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRS  314 (672)
T ss_pred             CCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhc
Confidence            9999985  4455679999999984443332222111     1111111       122567888888765442 10   


Q ss_pred             -cCCCCCCCc---------------------HHHHHHHCCC--HHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC--
Q psy8109         714 -TNEACYYMT---------------------PLHYASYRGD--CNDIARFLVEECNADITLRNFNNRTALNFAAFGNN--  767 (1011)
Q Consensus       714 -~~~~~~~~t---------------------~l~~A~~~g~--~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~--  767 (1011)
                       +..+..|.+                     .|+.-...++  ..+++++|+++ |+++|.. ..|.||||+|+..++  
T Consensus       315 ~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~-GAdIN~k-~~G~TpLH~Aa~~nnn~  392 (672)
T PHA02730        315 ITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDN-GATMDKT-TDNNYPLHDYFVNNNNI  392 (672)
T ss_pred             cccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHC-CCCCCcC-CCCCcHHHHHHHHcCCc
Confidence             001111322                     5666666552  38999999999 9999985 799999999998875  


Q ss_pred             --HHHHHHHHHCCC--CCCCCCcCCCCcccc---cccCC---------hHHHHHHHHHcCCCccccccCCCChHHHHHHH
Q psy8109         768 --LDLLKFLLKAGA--DPDILDLKDTSPLLS---SCRQG---------LYEIVDTLLEYNADTNLRTIKHGSTALHTAAF  831 (1011)
Q Consensus       768 --~~iv~~Ll~~ga--d~~~~d~~g~t~L~~---A~~~g---------~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~  831 (1011)
                        .+++++|+++|+  +++..|..|.||||.   |...+         ..+++++|+.+|+++|. .+..|.||||+|+.
T Consensus       393 i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINa-kD~~G~TPLh~Aa~  471 (672)
T PHA02730        393 VDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDM-IDNENKTLLYYAVD  471 (672)
T ss_pred             chHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhc-cCCCCCCHHHHHHH
Confidence              899999999998  689999999999983   33222         34679999999999998 88999999999999


Q ss_pred             cCCHHHHHHHHhccCCcccccC-CCCCHHHHHHH--cCCHHHHHHHHhcCCCcccccccCCCH---HhhHHhhCCHHHHH
Q psy8109         832 HNQLDIIKLLLKYNADINAEDK-YGKIAFHSACQ--AKNWDIVTFLLDAGSNIEKATKYRMTF---ESSKVVEKHVAKLR  905 (1011)
Q Consensus       832 ~g~~~iv~~Ll~~ga~in~~d~-~g~taL~~A~~--~g~~~iv~~Ll~~ga~~~~~~~~g~t~---l~~a~~~~~~~~~~  905 (1011)
                      .++.+++++|+++||++|.+|. .|.||||+|+.  .++.+++++|+++|+++....   .|.   +.+-..    .+++
T Consensus       472 ~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~~I~---~Tf~~~~~~~~~----k~ik  544 (672)
T PHA02730        472 VNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLETMI---DAFNRDIRYLYP----EPLL  544 (672)
T ss_pred             hCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHHHHH---HHHHhhHHhhHH----HHHH
Confidence            9999999999999999999997 69999999997  479999999999999986442   111   111000    1222


Q ss_pred             Hhhhc-c--Ccchhh--hhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhHh-hcCchhHHHhhhchhhhhcccccc
Q psy8109         906 AANIY-V--DKNIMV--QFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDIL-SKHPAQVEFYAKNPQISNCVKWKD  979 (1011)
Q Consensus       906 ~~~~~-~--~~~~~~--~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~  979 (1011)
                      .+-.| +  +.....  .........++.+|..|+..|+.+++++   .|+||++ .++....-+|.++|.++++..   
T Consensus       545 ~~I~Y~f~ldp~~y~~~~~~ii~~~~~I~~ckkei~~Mk~~~i~~---~Svydiif~~n~~~~~ry~~n~~~~k~~~---  618 (672)
T PHA02730        545 ACIRYALILDNDFPSKVKYDIAGRHKELKRYRADINRMKNAYISG---VSMFDILFKRNRRHRLRYAKNPTFINFVS---  618 (672)
T ss_pred             HHHHHHHhcChhhhhhhhhHHhhChHHHHHHHHHHHHHHhhhcCC---ceeEeEeeccCCcccceeecChHHHHHHH---
Confidence            11111 1  100000  1111123788899999999999999987   4777774 555556668999999888642   


Q ss_pred             ccccccccccccchhHHHHHHHhhhh
Q psy8109         980 LNLQFPIYGDVICCKFTKVLNSLKNK 1005 (1011)
Q Consensus       980 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1011)
                         ++++||..|...+.+..+|=+.-
T Consensus       619 ---~~~iYg~~Ik~iI~~s~~~~~~I  641 (672)
T PHA02730        619 ---NIKWYKKELTSIITETVKNSERI  641 (672)
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHH
Confidence               58999999998888777765443

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.5e-45  Score=432.17  Aligned_cols=432  Identities=18%  Similarity=0.192  Sum_probs=327.4

Q ss_pred             CHHHHHHHHHcCCCcccccCCCChHHHHHHHc---CCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHH----HHHH
Q psy8109         437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYF---GNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLE----IFNL  508 (1011)
Q Consensus       437 ~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~---g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~----iv~~  508 (1011)
                      .++.++.|+..|..++..+.+|.||||+|+..   |+.++|++|++ +++++..+..|.||||.|+..|+.+    +++.
T Consensus        11 ~~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~   90 (661)
T PHA02917         11 ALDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMA   90 (661)
T ss_pred             HHHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHH
Confidence            45666777777777777777788888876444   66788888877 7777777777888888888877744    4566


Q ss_pred             HHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc-cCCCCCCCCCCCHHHHH--HhcCCHHHHHHHHhCCCCccccC
Q psy8109         509 LLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCA--IVGNQLEVFNHLINSNADITMYK  585 (1011)
Q Consensus       509 Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~g~t~L~~A--~~~g~~eiv~~Ll~~~~~~~~~~  585 (1011)
                      |++.+...+..+  ..+++++|+..|+.+++++|+++ ++++..+..|.|||+.+  +..|+.+++++|+++|++++..+
T Consensus        91 Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d  168 (661)
T PHA02917         91 LLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYED  168 (661)
T ss_pred             HHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccc
Confidence            766543333332  23566777777788888888877 77788888888888754  35688999999999998876432


Q ss_pred             CCCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHH-----------cCCHHHHHHHHhhCCCCcccCCCCCCc
Q psy8109         586 NDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVS-----------HGCLEAVKFLLNTKNIDVNHKTKDGST  654 (1011)
Q Consensus       586 ~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~-----------~g~~~iv~~Ll~~~g~~~~~~~~~g~t  654 (1011)
                      ....      .|.          ...+.....+.||||+|+.           .++.+++++|++ .|++++..+..|.|
T Consensus       169 ~~~~------~g~----------~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~-~Gadvn~~d~~G~T  231 (661)
T PHA02917        169 EDDE------YGY----------AYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLIN-HGIKPSSIDKNYCT  231 (661)
T ss_pred             cccc------ccc----------ccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHH-CCCCcccCCCCCCc
Confidence            1100      000          0001223456799999976           468999999999 89999999999999


Q ss_pred             HHHHHHHcCCH--HHHHHHHHCCCCCcC----CCC-CCcHHHHHHH------cC--CCHHHHHHHHhCCCCCCccCCCCC
Q psy8109         655 ALFFACYDKRL--DLVEILLEANADVNL----GDG-TYTPLYTALM------KD--PSLDIIKMLVKYGADVNLTNEACY  719 (1011)
Q Consensus       655 ~L~~A~~~g~~--~iv~~Ll~~ga~~~~----~~~-~~t~L~~aa~------~~--~~~~iv~~Ll~~g~~~~~~~~~~~  719 (1011)
                      |||+|+..|+.  ++|++|++ |++++.    .+. +.++++.++.      ..  .+.+++++|++.|++.        
T Consensus       232 pLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~--------  302 (661)
T PHA02917        232 ALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPH--------  302 (661)
T ss_pred             HHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCC--------
Confidence            99999999985  79999975 887653    222 5677777772      12  2789999999999863        


Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC--HHHHHHHHHCCCCCCCCCcCCCCccccccc
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN--LDLLKFLLKAGADPDILDLKDTSPLLSSCR  797 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~--~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~  797 (1011)
                      +.+++++++..++ .+++.+++...+.++-      .+++..|+..|.  +++|++|+++||+++.++..|.++.    .
T Consensus       303 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~----~  371 (661)
T PHA02917        303 GIMCSIVPLWRND-KETISLILKTMNSDVL------QHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRN----I  371 (661)
T ss_pred             ceeEeeecccccc-hHHHHHHHHHhchHHH------HHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchh----h
Confidence            6678888988888 8999999865344331      123344445665  6699999999999999998998754    3


Q ss_pred             CChHHHHHHHHH-cCCCccccccCCCChHHHHHHHcC-----------------------CHHHHHHHHhccCCcccccC
Q psy8109         798 QGLYEIVDTLLE-YNADTNLRTIKHGSTALHTAAFHN-----------------------QLDIIKLLLKYNADINAEDK  853 (1011)
Q Consensus       798 ~g~~~iv~~Ll~-~g~~~~~~~~~~g~t~L~~Aa~~g-----------------------~~~iv~~Ll~~ga~in~~d~  853 (1011)
                      ....+++++|+. .|++++. .+..|+||||.|++.+                       ..++|++|+++|+++|.+|.
T Consensus       372 ~~~~~~i~~LL~~~ga~~~~-~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~  450 (661)
T PHA02917        372 NIDSYTMKYLLKKEGGDAVN-HLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINMIDK  450 (661)
T ss_pred             cCCHHHHHHHHHhcCCCccc-cCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCCCCCC
Confidence            556778888886 6888766 4556999999987543                       36788999999999999999


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHh-hCCHHHHHHhh
Q psy8109         854 YGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVV-EKHVAKLRAAN  908 (1011)
Q Consensus       854 ~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~~~~~~~~  908 (1011)
                      .|+||||+|+..++.+++++|+++|++++..|..|.|||++|+. .++.++++.+.
T Consensus       451 ~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL  506 (661)
T PHA02917        451 RGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLL  506 (661)
T ss_pred             CCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999996 67888887753

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=5.8e-45  Score=418.37  Aligned_cols=394  Identities=25%  Similarity=0.343  Sum_probs=325.5

Q ss_pred             HHHHHHHcCChhhHHHHHh--hccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHH
Q psy8109         589 PLHLACATGNMDMITYAMK--YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLD  666 (1011)
Q Consensus       589 ~l~~A~~~g~~~iv~~Ll~--~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~  666 (1011)
                      .+..|+..|+.++++.|++  ...++..+..|.||||.|+..|+.+++++|++ .|++++..+..|.|||+.|+..|+.+
T Consensus         4 ~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~-~Ga~~n~~~~~~~t~L~~A~~~~~~~   82 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIK-HGADINHINTKIPHPLLTAIKIGAHD   82 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            4566677777777777665  33456677789999999999999999999999 89999999999999999999999999


Q ss_pred             HHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCC
Q psy8109         667 LVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNA  746 (1011)
Q Consensus       667 iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~  746 (1011)
                      ++++|+++|+++....         . .....+++++|++.|++++..+..  |.||||+|+..|+ .+++++|++. |+
T Consensus        83 iv~~Ll~~g~~~~~~~---------~-~~~~~~~i~~ll~~g~d~n~~~~~--g~T~Lh~A~~~~~-~~~v~~Ll~~-ga  148 (434)
T PHA02874         83 IIKLLIDNGVDTSILP---------I-PCIEKDMIKTILDCGIDVNIKDAE--LKTFLHYAIKKGD-LESIKMLFEY-GA  148 (434)
T ss_pred             HHHHHHHCCCCCCcch---------h-ccCCHHHHHHHHHCcCCCCCCCCC--CccHHHHHHHCCC-HHHHHHHHhC-CC
Confidence            9999999999875321         1 145679999999999999988877  9999999999999 9999999998 99


Q ss_pred             CcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHH
Q psy8109         747 DITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTAL  826 (1011)
Q Consensus       747 ~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L  826 (1011)
                      +++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++|++|+++|++++. .+..|.|||
T Consensus       149 d~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~-~~~~g~TpL  227 (434)
T PHA02874        149 DVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMN-KCKNGFTPL  227 (434)
T ss_pred             CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcC-CCCCCCCHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987 778899999


Q ss_pred             HHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcC-CHHHHHHHHhcCCCcccccccCCCHHhhHHhhC-CHHHH
Q psy8109         827 HTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAK-NWDIVTFLLDAGSNIEKATKYRMTFESSKVVEK-HVAKL  904 (1011)
Q Consensus       827 ~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g-~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~-~~~~~  904 (1011)
                      |.|+..++ +++++|+ .|+++|.+|..|+||||+|+..+ +.+++++|+++|++++..|..|.|||++|+..+ +..++
T Consensus       228 ~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~i  305 (434)
T PHA02874        228 HNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVI  305 (434)
T ss_pred             HHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHH
Confidence            99999875 5677776 68999999999999999999876 899999999999999999999999999999887 55555


Q ss_pred             HHhhhcc------Cc---chh----hhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhHhh--------cCchhHH
Q psy8109         905 RAANIYV------DK---NIM----VQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILS--------KHPAQVE  963 (1011)
Q Consensus       905 ~~~~~~~------~~---~~~----~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i~~--------~~~~~~~  963 (1011)
                      +.+-...      +.   ...    .........+|..+|.+|+..|+.++.++.  ++++|++.        .+++.+.
T Consensus       306 k~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~c~~ei~~mk~~~~~~~--~s~~~~~~~~~~~~~~~n~~~~~  383 (434)
T PHA02874        306 KDIIANAVLIKEADKLKDSDFLEHIEIKDNKEFSDFIKECNEEIEDMKKTKCGCD--KNIFDLCLIRIKHKFDGNEDSIK  383 (434)
T ss_pred             HHHHHhcCchhhccccchhHHHHHHHHhccchHHHHHHHHHHHHHHHhcceeccc--chHHHHHHHHHhhccCCchhHHH
Confidence            5432111      00   000    011124467889999999999999998764  78888863        2333444


Q ss_pred             Hhhhchhh--hhcccccccccc-ccccccccchhHHHHHHHhhh
Q psy8109         964 FYAKNPQI--SNCVKWKDLNLQ-FPIYGDVICCKFTKVLNSLKN 1004 (1011)
Q Consensus       964 ~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 1004 (1011)
                      +|.++.+-  .+++  .++... ||+|+.+|.-.+.+.-+|+|+
T Consensus       384 ~~l~~~~~~~~~~~--~~~~~~~f~~y~~~i~~~i~~~~~~~~~  425 (434)
T PHA02874        384 DYLNCLDDNSHRML--KTIDINEFPIYSMYISRCISDNGKILKD  425 (434)
T ss_pred             HHHHHhhhhhhhhh--hhcccccCchHHHHHHHHHHHhhhhhhh
Confidence            55555322  2211  233333 999999999889888888875

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=2.2e-43  Score=400.09  Aligned_cols=356  Identities=21%  Similarity=0.264  Sum_probs=293.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHH--hCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcC
Q psy8109         261 PLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAI--VESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRK  338 (1011)
Q Consensus       261 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~--~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g  338 (1011)
                      ++..++..++.+.++.+++....      ..+.++||.++.  .++.++|++|+++|+  ++|.+|..|.||||+||..|
T Consensus        12 sl~~~~~~~n~~~~~~~l~~~~~------~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Ga--dvn~~d~~G~TpLh~Aa~~g   83 (446)
T PHA02946         12 SLYAKYNSKNLDVFRNMLQAIEP------SGNYHILHAYCGIKGLDERFVEELLHRGY--SPNETDDDGNYPLHIASKIN   83 (446)
T ss_pred             HHHHHHccCcHHHHHHHHhccCC------CCCChHHHHHHHhcCCCHHHHHHHHHCcC--CCCccCCCCCCHHHHHHHcC
Confidence            47889999999999999986322      214689998764  457899999999999  89999999999999999999


Q ss_pred             cHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC--ChhHHHHHHhcCCCCCC--CCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy8109         339 CLEIVKILLDKGADINSGNDDGCTPLFCAIAQN--CLEVFNYLVNHGCDLSV--PEGERTALHMASQFGNLEMVNYLLKH  414 (1011)
Q Consensus       339 ~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~--~~~~~t~L~~Aa~~g~~~iv~~Ll~~  414 (1011)
                      +.++|++|+++|+++|.+|..|.||||+|+..+  ..+++++|+++|++++.  ...+.|||+ |+..|+.+++++|++.
T Consensus        84 ~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~  162 (446)
T PHA02946         84 NNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSI  162 (446)
T ss_pred             CHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhc
Confidence            999999999999999999999999999999876  48999999999999985  367889997 6677999999999998


Q ss_pred             c-CccCCCCCCCcHhHHH-HhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcC--CHHHHHHHHhccCCCCCCCCC
Q psy8109         415 I-NINHQDKDGWTPLTCS-IKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFG--NLAMVNYLVKHIDINSENDLG  490 (1011)
Q Consensus       415 ~-~~~~~~~~~~t~l~~a-~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g--~~~iv~~Ll~~~~~~~~~~~g  490 (1011)
                      + +++..|..|.||||.+ ..+..+.+++++|++.|++++..+..|.||||+|+..|  +.+++++|+.+++++..+..|
T Consensus       163 gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~gadin~~d~~G  242 (446)
T PHA02946        163 GFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPSTDVNKQNKFG  242 (446)
T ss_pred             cccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHcCCCCCCCCCCC
Confidence            8 8888999999999984 44555788999999999999999999999999999876  788999998888899999999


Q ss_pred             CcHHHHHHHcCC-HHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhccCCCCCCCCCCCHHHHHHhcCCHH
Q psy8109         491 KTPIYFAIKNNH-LEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLE  569 (1011)
Q Consensus       491 ~t~L~~A~~~g~-~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~e  569 (1011)
                      .||||+|+..++ .+++++|++.|+..+     +. +++.|+..+..++++++..+.     ...|.||||+|+..|+.+
T Consensus       243 ~TpLh~A~~~~~~~~~~~~Ll~~g~~~~-----~~-~~~~a~~~~~~~~~e~l~~~g-----~~~~~TpLh~Aa~~g~~e  311 (446)
T PHA02946        243 DSPLTLLIKTLSPAHLINKLLSTSNVIT-----DQ-TVNICIFYDRDDVLEIINDKG-----KQYDSTDFKMAVEVGSIR  311 (446)
T ss_pred             CCHHHHHHHhCChHHHHHHHHhCCCCCC-----Cc-HHHHHHHcCchHHHHHHHHcC-----cccCCCHHHHHHHcCCHH
Confidence            999999999887 478889998886543     22 377777777777777776651     124567777777777777


Q ss_pred             HHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCC
Q psy8109         570 VFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKT  649 (1011)
Q Consensus       570 iv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~  649 (1011)
                      ++++|+++|+                                     .|.||||+|+..|+.+++++|+. .|++++.. 
T Consensus       312 ivk~Ll~~~~-------------------------------------~~~t~L~~A~~~~~~~~v~~Ll~-~ga~~n~~-  352 (446)
T PHA02946        312 CVKYLLDNDI-------------------------------------ICEDAMYYAVLSEYETMVDYLLF-NHFSVDSV-  352 (446)
T ss_pred             HHHHHHHCCC-------------------------------------ccccHHHHHHHhCHHHHHHHHHH-CCCCCCCc-
Confidence            7777776543                                     25678888888888888888887 78888774 


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy8109         650 KDGSTALFFACYDKRLDLVEILLEAN  675 (1011)
Q Consensus       650 ~~g~t~L~~A~~~g~~~iv~~Ll~~g  675 (1011)
                      ..|.|||++|+..++.++++.|+.+.
T Consensus       353 ~~G~t~l~~a~~~~~~~~~~~ll~~~  378 (446)
T PHA02946        353 VNGHTCMSECVRLNNPVILSKLMLHN  378 (446)
T ss_pred             cccccHHHHHHHcCCHHHHHHHHhcC
Confidence            56888888888888888888887753

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=2.8e-42  Score=391.06  Aligned_cols=359  Identities=19%  Similarity=0.194  Sum_probs=263.5

Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHH
Q psy8109         462 LHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAI--KNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMV  539 (1011)
Q Consensus       462 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~--~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv  539 (1011)
                      +..+...++.+.++.++.....    ..+.++||.++  ..++.+++++|++.|++++..+..|.||||+|+..|+.+++
T Consensus        13 l~~~~~~~n~~~~~~~l~~~~~----~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv   88 (446)
T PHA02946         13 LYAKYNSKNLDVFRNMLQAIEP----SGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIV   88 (446)
T ss_pred             HHHHHccCcHHHHHHHHhccCC----CCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence            5677788888888888873221    22357888765  34567889999999999998888899999999998998999


Q ss_pred             HHHHhc-cCCCCCCCCCCCHHHHHHhcC--CHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCC
Q psy8109         540 SFLLSH-IGVNLQDNKGCTPLHCAIVGN--QLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIEND  616 (1011)
Q Consensus       540 ~~Ll~~-~~~~~~~~~g~t~L~~A~~~g--~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~  616 (1011)
                      ++|+++ ++++.++..|.||||+|+..+  ..+++++|+++|++++.                             ..+.
T Consensus        89 ~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~-----------------------------~~d~  139 (446)
T PHA02946         89 AMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINN-----------------------------SVDE  139 (446)
T ss_pred             HHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccc-----------------------------ccCC
Confidence            888888 788888888888888887765  47888888888877542                             2345


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCcCCCC-CCcHHHHHHH
Q psy8109         617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK--RLDLVEILLEANADVNLGDG-TYTPLYTALM  693 (1011)
Q Consensus       617 ~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~  693 (1011)
                      .|.|||+ |+..|+.+++++|++ .|++++..+..|+||||+|+..+  +.+++++|+++|++++..+. +.||||.|+.
T Consensus       140 ~g~tpL~-aa~~~~~~vv~~Ll~-~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~  217 (446)
T PHA02946        140 EGCGPLL-ACTDPSERVFKKIMS-IGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCS  217 (446)
T ss_pred             CCCcHHH-HHHCCChHHHHHHHh-ccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence            6778886 556678888888887 78888888888888888877644  35777788887777777665 6777777776


Q ss_pred             cC-CCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHH
Q psy8109         694 KD-PSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLK  772 (1011)
Q Consensus       694 ~~-~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~  772 (1011)
                      .. ++.+++++|+. |++++..+..  |.||||+|+..++..+++++|+.+ |+.++     ++| ++.|+..++.++++
T Consensus       218 ~~~~~~~iv~lLl~-gadin~~d~~--G~TpLh~A~~~~~~~~~~~~Ll~~-g~~~~-----~~~-~~~a~~~~~~~~~e  287 (446)
T PHA02946        218 KTVKNVDIINLLLP-STDVNKQNKF--GDSPLTLLIKTLSPAHLINKLLST-SNVIT-----DQT-VNICIFYDRDDVLE  287 (446)
T ss_pred             cCCCcHHHHHHHHc-CCCCCCCCCC--CCCHHHHHHHhCChHHHHHHHHhC-CCCCC-----CcH-HHHHHHcCchHHHH
Confidence            32 36677777664 6777766665  777777777776645677777776 54432     233 67777777777777


Q ss_pred             HHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCccccc
Q psy8109         773 FLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED  852 (1011)
Q Consensus       773 ~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d  852 (1011)
                      +|..+|.+      .|.||||+|+..|+.++|++|+++|+        .|.||||+|+..|+.++|++|+.+|+++|.. 
T Consensus       288 ~l~~~g~~------~~~TpLh~Aa~~g~~eivk~Ll~~~~--------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-  352 (446)
T PHA02946        288 IINDKGKQ------YDSTDFKMAVEVGSIRCVKYLLDNDI--------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-  352 (446)
T ss_pred             HHHHcCcc------cCCCHHHHHHHcCCHHHHHHHHHCCC--------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-
Confidence            77776642      35677777777777777777777753        3567777777777777777777777777774 


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109         853 KYGKIAFHSACQAKNWDIVTFLLDAGSN  880 (1011)
Q Consensus       853 ~~g~taL~~A~~~g~~~iv~~Ll~~ga~  880 (1011)
                      ..|.||||+|++.++.++++.|+.+..+
T Consensus       353 ~~G~t~l~~a~~~~~~~~~~~ll~~~~~  380 (446)
T PHA02946        353 VNGHTCMSECVRLNNPVILSKLMLHNPT  380 (446)
T ss_pred             cccccHHHHHHHcCCHHHHHHHHhcCcc
Confidence            4677777777777777777777775433

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.4e-43  Score=412.22  Aligned_cols=399  Identities=24%  Similarity=0.319  Sum_probs=324.8

Q ss_pred             HHcCChhhHHHHHh-hccccccCCCCCcHHHHHHHcC---CHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcC-CHHHH
Q psy8109         594 CATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHG---CLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK-RLDLV  668 (1011)
Q Consensus       594 ~~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g---~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g-~~~iv  668 (1011)
                      +..++.+++++|++ +++++..+..|.||||.|+..+   +.+++++|++ .|++++..+..|.||||+|+..| +.+++
T Consensus        22 ~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~-~Gadin~~~~~g~TpLh~A~~~~~~~~iv  100 (471)
T PHA03095         22 ASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLE-AGADVNAPERCGFTPLHLYLYNATTLDVI  100 (471)
T ss_pred             CCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCcHHHH
Confidence            34445556666655 5566777888999999999998   9999999999 99999999999999999999999 59999


Q ss_pred             HHHHHCCCCCcCCCC-CCcHHHHHHH-cCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCC-HHHHHHHHHHhcC
Q psy8109         669 EILLEANADVNLGDG-TYTPLYTALM-KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD-CNDIARFLVEECN  745 (1011)
Q Consensus       669 ~~Ll~~ga~~~~~~~-~~t~L~~aa~-~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~-~~~iv~~Ll~~~g  745 (1011)
                      ++|+++|++++..+. +.||||.|+. ..++.+++++|+++|++++..+..  |.||||+|+..++ ..+++++|++. |
T Consensus       101 ~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~--g~tpL~~a~~~~~~~~~iv~~Ll~~-g  177 (471)
T PHA03095        101 KLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLY--GMTPLAVLLKSRNANVELLRLLIDA-G  177 (471)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCC--CCCHHHHHHHcCCCCHHHHHHHHHc-C
Confidence            999999999999888 9999999994 356899999999999999988877  9999999988763 27999999999 9


Q ss_pred             CCcccccCCCccHHHHHHhC--CCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChH--HHHHHHHHcCCCccccccCC
Q psy8109         746 ADITLRNFNNRTALNFAAFG--NNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLY--EIVDTLLEYNADTNLRTIKH  821 (1011)
Q Consensus       746 ~~~~~~~~~g~t~L~~Aa~~--g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~--~iv~~Ll~~g~~~~~~~~~~  821 (1011)
                      ++++..+..|.||||.|+..  ++.+++++|++.|++++.+|..|.||||+|+..|+.  .+++.|++.|+++|. .+..
T Consensus       178 ~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~-~d~~  256 (471)
T PHA03095        178 ADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINA-RNRY  256 (471)
T ss_pred             CCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCC-cCCC
Confidence            99999999999999999865  789999999999999999999999999999999864  689999999999998 7799


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhH---Hhh
Q psy8109         822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSK---VVE  898 (1011)
Q Consensus       822 g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a---~~~  898 (1011)
                      |+||||+|+..|+.++|++|+++|++++.+|..|+|||++|+..|+.+++++|+++|++++..+....++...+   ...
T Consensus       257 g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (471)
T PHA03095        257 GQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVAATLNTASVAGGDIPSD  336 (471)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHHHHHHHHHhhccCCCccH
Confidence            99999999999999999999999999999999999999999999999999999999999876654333332222   111


Q ss_pred             CCHHHHHHhhhccCcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhHhhcCchhHHHhhhchhhhhccccc
Q psy8109         899 KHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKHPAQVEFYAKNPQISNCVKWK  978 (1011)
Q Consensus       899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  978 (1011)
                      ....++..+.+................++...|..|+..|+..+++.  .+++||++. +.+....+..++.+..     
T Consensus       337 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ei~~mk~~~i~~--~~s~~d~~~-~~~~~~~~~~~~~~~~-----  408 (471)
T PHA03095        337 ATRLCVAKVVLRGAFSLLPEPIRAYHADFIRECEAEIAVMRTTRIGT--GVSLLDILF-ARNPDILLVSNASLRK-----  408 (471)
T ss_pred             HHHHHHHHHHHhcchhhccHHHHHHHHHHHHHHHHHHHHHHHhHhCC--CCcHHHHHH-ccCCcccccchHHHHH-----
Confidence            12223322222111111112223456788899999999999999985  489999976 2223333444444332     


Q ss_pred             cccccccccccccchhHHHHHHHhhhhhc
Q psy8109         979 DLNLQFPIYGDVICCKFTKVLNSLKNKNK 1007 (1011)
Q Consensus       979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1011)
                        ...|++|+.+|...+.+..+|-+.=++
T Consensus       409 --~~~~~iY~~~i~~~i~~~~~r~~li~~  435 (471)
T PHA03095        409 --KARLTVYGKALRARIEEMRKRSKLVER  435 (471)
T ss_pred             --HHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence              235999999999999988888664433

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=9.4e-43  Score=408.01  Aligned_cols=389  Identities=29%  Similarity=0.382  Sum_probs=326.3

Q ss_pred             hhHHHHHh-hccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHH-----HHHcCCHHHHHHHHH
Q psy8109         600 DMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFF-----ACYDKRLDLVEILLE  673 (1011)
Q Consensus       600 ~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~-----A~~~g~~~iv~~Ll~  673 (1011)
                      ++++++++ ....+..+..+.||||.|+..|+.+++++|++ .|++++..+..+.||||+     |+..++.+++++|++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~-~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~   94 (480)
T PHA03100         16 KNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLD-NGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLE   94 (480)
T ss_pred             HHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHH-cCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHH
Confidence            44555554 23344567788999999999999999999999 899999999999999999     999999999999999


Q ss_pred             CCCCCcCCCC-CCcHHHHHHH-cCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCC--CHHHHHHHHHHhcCCCcc
Q psy8109         674 ANADVNLGDG-TYTPLYTALM-KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRG--DCNDIARFLVEECNADIT  749 (1011)
Q Consensus       674 ~ga~~~~~~~-~~t~L~~aa~-~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g--~~~~iv~~Ll~~~g~~~~  749 (1011)
                      .|++++..+. +.||||.|+. ..++.+++++|+++|++++..+..  |.||||+|+..|  + .+++++|+++ |++++
T Consensus        95 ~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~-~~iv~~Ll~~-g~din  170 (480)
T PHA03100         95 YGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSD--GENLLHLYLESNKID-LKILKLLIDK-GVDIN  170 (480)
T ss_pred             CCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCC--CCcHHHHHHHcCCCh-HHHHHHHHHC-CCCcc
Confidence            9999988877 8999999993 389999999999999999988877  999999999999  7 9999999999 99999


Q ss_pred             cccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCC------CCcccccccCCh--HHHHHHHHHcCCCccccccCC
Q psy8109         750 LRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKD------TSPLLSSCRQGL--YEIVDTLLEYNADTNLRTIKH  821 (1011)
Q Consensus       750 ~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g------~t~L~~A~~~g~--~~iv~~Ll~~g~~~~~~~~~~  821 (1011)
                      ..+..|.||||.|+..|+.+++++|+++|++++..+..|      .||||.|+..|+  .+++++|+++|++++. .+..
T Consensus       171 ~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~-~d~~  249 (480)
T PHA03100        171 AKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI-KDVY  249 (480)
T ss_pred             cccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC-CCCC
Confidence            999999999999999999999999999999999999888      899999999999  9999999999999998 7789


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccccc----CCCHHhhHHh
Q psy8109         822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKY----RMTFESSKVV  897 (1011)
Q Consensus       822 g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~----g~t~l~~a~~  897 (1011)
                      |.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|++++..+..    ..+.+.... 
T Consensus       250 g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~i~~~~~~~~~~~~~~~~-  328 (480)
T PHA03100        250 GFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTIIETLLYFKDKDLNTIT-  328 (480)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHHHHHHHHHHhccCchHHH-
Confidence            999999999999999999999999999999999999999999999999999999999999875432    111111100 


Q ss_pred             hCCHHHHHHh-------hhccCcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhHh-hcCchhHHHhhhch
Q psy8109         898 EKHVAKLRAA-------NIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDIL-SKHPAQVEFYAKNP  969 (1011)
Q Consensus       898 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~  969 (1011)
                        ...++...       ...+..+...........++...|..|+..|+.++++   ..++|||+ .++.+.+.+|.+++
T Consensus       329 --~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~C~~ei~~mk~~~i~---~~s~~di~~~~n~~~~~~~~~~~  403 (480)
T PHA03100        329 --KIKMLKKSIMYMFLLDPGFYKNRKLIENSKSLKDVINECEKEIERMKEIKLN---KVTVYDIIFNKNINFLSRYVNNK  403 (480)
T ss_pred             --HHHHHHHHHHHHhccchhHHhhHHHhhhhHHHHHHHHHHHHHHHHHHhcEEC---CEEEEEEEecCCccHHHHHhCCh
Confidence              00011100       0001111111112356678889999999999999994   37888886 44667888899999


Q ss_pred             hhhhccccccccccccccccccchhHHHHHHHhhhhhc
Q psy8109         970 QISNCVKWKDLNLQFPIYGDVICCKFTKVLNSLKNKNK 1007 (1011)
Q Consensus       970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1011)
                      .+.++.       .|++|+.+|...+.+..+|-+.=++
T Consensus       404 ~~~~~~-------~~~~Y~~~i~~~i~~~~~r~~~i~~  434 (480)
T PHA03100        404 SVTKYT-------TSKIYGKYIKKVINKAIERKKLIKK  434 (480)
T ss_pred             hhhhhh-------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            887642       4889999999999998888665444

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=2.5e-41  Score=391.52  Aligned_cols=392  Identities=17%  Similarity=0.189  Sum_probs=215.0

Q ss_pred             CCHHHHHHHHHcC-CCcccc-cCCCChHHHHHHH--cCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCC--HHHHHH
Q psy8109         436 ASLEVFHSIIEAG-ADIKAK-LMDGTTALHLACY--FGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNH--LEIFNL  508 (1011)
Q Consensus       436 ~~~~i~~~Ll~~g-~~~~~~-~~~g~t~L~~Aa~--~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~--~~iv~~  508 (1011)
                      .+.+++++|++.| ++++.. +..|.||||.|+.  +++.+++++|++ +++++..+..|.||||+|+..|+  .++|++
T Consensus       153 v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVkl  232 (764)
T PHA02716        153 IDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKK  232 (764)
T ss_pred             CCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHH
Confidence            4667777777777 676666 6667777776643  345667777776 66666666667777777776664  366777


Q ss_pred             HHhcCcccccccCCCCCHHHHHH---HhCCHHHHHHHHhccCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccC
Q psy8109         509 LLKLGADVAVKMKSNFTCLHVAC---EFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYK  585 (1011)
Q Consensus       509 Ll~~ga~~~~~~~~~~t~L~~A~---~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~  585 (1011)
                      |++.|++++.++..|.||||.|+   ..++.++++.|++..+.+... ....+++                         
T Consensus       233 LLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~-~~~~~L~-------------------------  286 (764)
T PHA02716        233 IIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVK-NIPMILH-------------------------  286 (764)
T ss_pred             HHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccc-cchhhhH-------------------------
Confidence            77777777766666777766654   345566666665541111100 0011111                         


Q ss_pred             CCCHHHHHHHcCChhhHHHHHh-hccccccCCCCCcHHHHHHH--cCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHH-
Q psy8109         586 NDSPLHLACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVS--HGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACY-  661 (1011)
Q Consensus       586 ~~t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~--~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~-  661 (1011)
                         .+..|+..|+.+++++|++ +++++..|..|.||||.|+.  .++.+++++|++ .|++++.++..|+||||+|+. 
T Consensus       287 ---~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe-~GADIN~kD~~G~TPLH~A~~~  362 (764)
T PHA02716        287 ---SYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHE-YGNDLNEPDNIGNTVLHTYLSM  362 (764)
T ss_pred             ---HHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHH-cCCCCccCCCCCCCHHHHHHHh
Confidence               1112344444444444444 44456666777777777653  356777777777 677777777777777777654 


Q ss_pred             -------------cCCHHHHHHHHHCCCCCcCCCC-CCcHHHH---HHHcCCCHHHHHHHHhCCCCCCccCC--------
Q psy8109         662 -------------DKRLDLVEILLEANADVNLGDG-TYTPLYT---ALMKDPSLDIIKMLVKYGADVNLTNE--------  716 (1011)
Q Consensus       662 -------------~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~---aa~~~~~~~iv~~Ll~~g~~~~~~~~--------  716 (1011)
                                   .++.+++++|+++|++++..+. +.||||.   ++...++.+++++|++.|+.......        
T Consensus       363 lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~  442 (764)
T PHA02716        363 LSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIR  442 (764)
T ss_pred             hhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhc
Confidence                         2455666666666666655554 5566652   12223455566666555433211110        


Q ss_pred             CCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccc
Q psy8109         717 ACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSC  796 (1011)
Q Consensus       717 ~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~  796 (1011)
                      ......++|.++..++ .++..++......                ......+++.+++..+.+++..|..|+||||+|+
T Consensus       443 ~d~~~~~lhh~~a~~~-~~~~~~~~~~~~~----------------~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa  505 (764)
T PHA02716        443 VDDTPCIIHHIIAKYN-IPTDLYTDEYEPY----------------DSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSI  505 (764)
T ss_pred             cCcchhhHHHHHHhcC-cchhhhhhhhhhc----------------cccccchhhHHHHHhhccccccCCCCCCHHHHHH
Confidence            0000111222222222 1111111111000                0001123333444445556666666666666666


Q ss_pred             cCChH-----HHHHHHHHcCCCccccccCCCChHHHHHHHcCCH-----HHHHHHHhccCCcccccCCCCCHHHHHHHcC
Q psy8109         797 RQGLY-----EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQL-----DIIKLLLKYNADINAEDKYGKIAFHSACQAK  866 (1011)
Q Consensus       797 ~~g~~-----~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~-----~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g  866 (1011)
                      ..|+.     ++|++|++.|+++|. .+..|+||||+|+.+|+.     ++|+.|+++|++++..      .|++|...+
T Consensus       506 ~~g~~~~v~~e~~k~LL~~GADIN~-~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~------~l~~~~~~~  578 (764)
T PHA02716        506 ISHTNANIVMDSFVYLLSIQYNINI-PTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV------IIFLDKCYA  578 (764)
T ss_pred             HcCCccchhHHHHHHHHhCCCCCcc-cCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH------HHHHHhhhh
Confidence            66544     344666666666665 566666666666666654     6666666666666553      366666666


Q ss_pred             CHHHHHHHHhcCCCc
Q psy8109         867 NWDIVTFLLDAGSNI  881 (1011)
Q Consensus       867 ~~~iv~~Ll~~ga~~  881 (1011)
                      +.+++.+|..+|+.+
T Consensus       579 ~~~~~~ll~~~~~~~  593 (764)
T PHA02716        579 NGKFPSLLLSEDDII  593 (764)
T ss_pred             hhHHHHHHHHcchhH
Confidence            666666666666544

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=7.5e-42  Score=387.62  Aligned_cols=406  Identities=17%  Similarity=0.202  Sum_probs=298.3

Q ss_pred             HHHHHHHHhcc-CCC-CCCCCCCcHHHHHHHcC---CHHHHHHHHhcCcccccccCCCCCHHHHHHHhC--CHHHHHHHH
Q psy8109         471 LAMVNYLVKHI-DIN-SENDLGKTPIYFAIKNN---HLEIFNLLLKLGADVAVKMKSNFTCLHVACEFA--SIEMVSFLL  543 (1011)
Q Consensus       471 ~~iv~~Ll~~~-~~~-~~~~~g~t~L~~A~~~g---~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g--~~~iv~~Ll  543 (1011)
                      ...+++.++.+ +++ ..+..|.||||+|+.+|   +.+++++|+++|++++.++..|.||||+|+..+  +.+++++|+
T Consensus        20 ~~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll   99 (672)
T PHA02730         20 YKKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLI   99 (672)
T ss_pred             HHHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHH
Confidence            45566677755 777 67778889999998886   488999999999988888888888888877755  677777777


Q ss_pred             hc-cC--CCCCCCCCCCHHHHHHh--cCCHHHHHHHHh-CCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccC--
Q psy8109         544 SH-IG--VNLQDNKGCTPLHCAIV--GNQLEVFNHLIN-SNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIEN--  615 (1011)
Q Consensus       544 ~~-~~--~~~~~~~g~t~L~~A~~--~g~~eiv~~Ll~-~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~--  615 (1011)
                      +. ++  .+..+..+.+||+.++.  .++.+++++|+. .+.+                              ++...  
T Consensus       100 ~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~------------------------------~~~~~~~  149 (672)
T PHA02730        100 SSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIR------------------------------PSKNTNY  149 (672)
T ss_pred             hcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCC------------------------------hhhhhhh
Confidence            76 22  34455556666666655  566666666664 3333                              33331  


Q ss_pred             ---CCCCcHHHHHHHcCCHHHHHHHHhhCCCCcc-------cCCCCCC-cHHHHH------HHcCCHHHHHHHHHCCCCC
Q psy8109         616 ---DIGETPLHVAVSHGCLEAVKFLLNTKNIDVN-------HKTKDGS-TALFFA------CYDKRLDLVEILLEANADV  678 (1011)
Q Consensus       616 ---~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~-------~~~~~g~-t~L~~A------~~~g~~~iv~~Ll~~ga~~  678 (1011)
                         ..|.+|++.++..++.++|++|++ .|++++       ..+..+. |.|+++      ...++.+++++|+++|+++
T Consensus       150 ~~~~~~~~~~yl~~~~~~~eIvklLi~-~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadI  228 (672)
T PHA02730        150 YIHCLGLVDIYVTTPNPRPEVLLWLLK-SECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSI  228 (672)
T ss_pred             hccccchhhhhHhcCCCchHHHHHHHH-cCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCC
Confidence               378999999999999999999999 899985       2333344 445533      3457899999999999999


Q ss_pred             cCCCC-CCcHHHHHH-HcCCCHHHHHHHHhCCCCCCccCCC--CCCCcHHHHHH------H-CCCHHHHHHHHHHhcCCC
Q psy8109         679 NLGDG-TYTPLYTAL-MKDPSLDIIKMLVKYGADVNLTNEA--CYYMTPLHYAS------Y-RGDCNDIARFLVEECNAD  747 (1011)
Q Consensus       679 ~~~~~-~~t~L~~aa-~~~~~~~iv~~Ll~~g~~~~~~~~~--~~~~t~l~~A~------~-~g~~~~iv~~Ll~~~g~~  747 (1011)
                      +..+. +.||||.+. ...++.+++++|++...+....+..  ++.+..|+--.      . .|-..++|..|++.++.-
T Consensus       229 N~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~  308 (672)
T PHA02730        229 HGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTL  308 (672)
T ss_pred             CCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcc
Confidence            99887 999999633 3467799999999843322211111  00111111111      1 122257788888863321


Q ss_pred             ------cccccCCCcc---------------------HHHHHHhCC---CHHHHHHHHHCCCCCCCCCcCCCCccccccc
Q psy8109         748 ------ITLRNFNNRT---------------------ALNFAAFGN---NLDLLKFLLKAGADPDILDLKDTSPLLSSCR  797 (1011)
Q Consensus       748 ------~~~~~~~g~t---------------------~L~~Aa~~g---~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~  797 (1011)
                            +...+..|.+                     .|+.=...+   +.+++++|+++||++|.. ..|.||||+|+.
T Consensus       309 ~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~  387 (672)
T PHA02730        309 IDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFV  387 (672)
T ss_pred             hhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHH
Confidence                  1113333432                     555555544   699999999999999985 799999999988


Q ss_pred             CCh----HHHHHHHHHcCC--CccccccCCCChHHHH---HHHcC---------CHHHHHHHHhccCCcccccCCCCCHH
Q psy8109         798 QGL----YEIVDTLLEYNA--DTNLRTIKHGSTALHT---AAFHN---------QLDIIKLLLKYNADINAEDKYGKIAF  859 (1011)
Q Consensus       798 ~g~----~~iv~~Ll~~g~--~~~~~~~~~g~t~L~~---Aa~~g---------~~~iv~~Ll~~ga~in~~d~~g~taL  859 (1011)
                      .++    .+++++|+++|+  +++. .+..|.||||.   |...+         ..+++++|+++|+++|.+|..|+|||
T Consensus       388 ~nnn~i~~eIvelLIs~Ga~~dIN~-kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPL  466 (672)
T PHA02730        388 NNNNIVDVNVVRFIVENNGHMAINH-VSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLL  466 (672)
T ss_pred             HcCCcchHHHHHHHHHcCCCccccc-cccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHH
Confidence            774    899999999998  5776 67789999984   33332         23679999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCcccccc-cCCCHHhhHHhh--CCHHHHHHhhh
Q psy8109         860 HSACQAKNWDIVTFLLDAGSNIEKATK-YRMTFESSKVVE--KHVAKLRAANI  909 (1011)
Q Consensus       860 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~g~t~l~~a~~~--~~~~~~~~~~~  909 (1011)
                      |+|+..++.+++++|+++||+++..+. .|.||+++|+..  ++.++++.+-.
T Consensus       467 h~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs  519 (672)
T PHA02730        467 YYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLS  519 (672)
T ss_pred             HHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHH
Confidence            999999999999999999999999997 599999999874  78888887643

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=7.9e-41  Score=387.35  Aligned_cols=404  Identities=21%  Similarity=0.260  Sum_probs=286.4

Q ss_pred             HHcCCHHHHHHHHHcC-CCCcccccCCCCcHHHHHHHh--CCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCc--H
Q psy8109         266 ILNSDIELVKLLLEKG-ANPLAIEKSRNRTALHVAAIV--ESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKC--L  340 (1011)
Q Consensus       266 ~~~g~~~iv~~Ll~~g-~~~~~~~~~~g~t~L~~Aa~~--g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~--~  340 (1011)
                      ...++.++|++|+++| ++++...+..|.||||.|+..  ++.++|++|+++|+  +++.+|..|.||||+|+..|+  .
T Consensus       150 ~~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GA--DVN~kD~~G~TPLH~Aa~~g~~~~  227 (764)
T PHA02716        150 TRGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGV--NVNLQNNHLITPLHTYLITGNVCA  227 (764)
T ss_pred             ccCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCCCH
Confidence            3568999999999999 999887444599999998754  67999999999999  899999999999999999995  5


Q ss_pred             HHHHHHHHCCCCCccCCCCCCcHHHHHH---HcCChhHHHHHHhcCCCCCCCCCCCcHHH---HHHhcCCHHHHHHHHhc
Q psy8109         341 EIVKILLDKGADINSGNDDGCTPLFCAI---AQNCLEVFNYLVNHGCDLSVPEGERTALH---MASQFGNLEMVNYLLKH  414 (1011)
Q Consensus       341 ~iv~~Ll~~ga~~n~~~~~g~t~L~~A~---~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~---~Aa~~g~~~iv~~Ll~~  414 (1011)
                      ++|++|+++||++|..+..|.||||+|+   ..++.++++.|++.+..... .....+++   .|++.|+.+++++|+++
T Consensus       228 eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~-~~~~~~L~~~i~AA~~g~leiVklLLe~  306 (764)
T PHA02716        228 SVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKV-KNIPMILHSYITLARNIDISVVYSFLQP  306 (764)
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccc-ccchhhhHHHHHHHHcCCHHHHHHHHhC
Confidence            9999999999999999999999999885   56899999999987533221 11122333   47888999999999988


Q ss_pred             c-CccCCCCCCCcHhHHHH-hcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCCCCc
Q psy8109         415 I-NINHQDKDGWTPLTCSI-KGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKT  492 (1011)
Q Consensus       415 ~-~~~~~~~~~~t~l~~a~-~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t  492 (1011)
                      | +++..|..|+||||+|+ .+..+.+++++|++.|++++.++..|.||||+|+....  ++..+    +.+        
T Consensus       307 GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~la--v~~~l----d~~--------  372 (764)
T PHA02716        307 GVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLS--VVNIL----DPE--------  372 (764)
T ss_pred             CCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhh--hhccc----ccc--------
Confidence            8 78888888888888743 44457888888888888888888888888888765210  00000    000        


Q ss_pred             HHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHH----HHHhCCHHHHHHHHhc-cCCCCC--------CCCC--CC
Q psy8109         493 PIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHV----ACEFASIEMVSFLLSH-IGVNLQ--------DNKG--CT  557 (1011)
Q Consensus       493 ~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~----A~~~g~~~iv~~Ll~~-~~~~~~--------~~~g--~t  557 (1011)
                          +...++.+++++|++.|++++..+..|.||||.    |...++.+++++|++. +.....        ...+  ..
T Consensus       373 ----~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~  448 (764)
T PHA02716        373 ----TDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPC  448 (764)
T ss_pred             ----ccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchh
Confidence                011345666666666666666666666666662    2223456666666654 111000        0111  12


Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHH-HhhccccccCCCCCcHHHHHHHcCCH-----
Q psy8109         558 PLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYA-MKYFDVNIENDIGETPLHVAVSHGCL-----  631 (1011)
Q Consensus       558 ~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~L-l~~~~~~~~~~~g~t~L~~A~~~g~~-----  631 (1011)
                      .++.++..+..++..++.....-.             .....+++..+ +.+.+++..+..|.||||+|+..|+.     
T Consensus       449 ~lhh~~a~~~~~~~~~~~~~~~~~-------------~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~  515 (764)
T PHA02716        449 IIHHIIAKYNIPTDLYTDEYEPYD-------------STKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVM  515 (764)
T ss_pred             hHHHHHHhcCcchhhhhhhhhhcc-------------ccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhH
Confidence            244455544444333332221100             00112233332 33667788899999999999999876     


Q ss_pred             HHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCH-----HHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHh
Q psy8109         632 EAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRL-----DLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVK  706 (1011)
Q Consensus       632 ~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~-----~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~  706 (1011)
                      +++++|++ .|++++.++..|+||||+|+..|+.     ++++.|+++|++++..     .++.+.. ..+.+++.+|..
T Consensus       516 e~~k~LL~-~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~-----~l~~~~~-~~~~~~~~ll~~  588 (764)
T PHA02716        516 DSFVYLLS-IQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV-----IIFLDKC-YANGKFPSLLLS  588 (764)
T ss_pred             HHHHHHHh-CCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH-----HHHHHhh-hhhhHHHHHHHH
Confidence            45599998 8999999999999999999999976     9999999999988754     3555555 677788888887


Q ss_pred             CCCC
Q psy8109         707 YGAD  710 (1011)
Q Consensus       707 ~g~~  710 (1011)
                      +++.
T Consensus       589 ~~~~  592 (764)
T PHA02716        589 EDDI  592 (764)
T ss_pred             cchh
Confidence            7654

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.2e-41  Score=395.41  Aligned_cols=376  Identities=26%  Similarity=0.304  Sum_probs=291.0

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHc
Q psy8109         615 NDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMK  694 (1011)
Q Consensus       615 ~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~  694 (1011)
                      ...+.||||.|+..|+.++|++|++ .|++++..+..|.||||+|+..|+.+++++|++.+...+. ..+.++++.|+. 
T Consensus        34 ~~~~~tPLh~A~~~g~~e~vk~Ll~-~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~~l~~a~~-  110 (477)
T PHA02878         34 SLIPFIPLHQAVEARNLDVVKSLLT-RGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV-FYTLVAIKDAFN-  110 (477)
T ss_pred             cccCcchHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc-ccchhhHHHHHH-
Confidence            3457789999999999999999998 7889999999999999999999999999999887765554 336678888887 


Q ss_pred             CCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCC-HHHHHHHHHHhcCCCcccccCC-CccHHHHHHhCCCHHHHH
Q psy8109         695 DPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD-CNDIARFLVEECNADITLRNFN-NRTALNFAAFGNNLDLLK  772 (1011)
Q Consensus       695 ~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~-~~~iv~~Ll~~~g~~~~~~~~~-g~t~L~~Aa~~g~~~iv~  772 (1011)
                      .++.+++++|+..+.+......    ...+......+. ..+++++|++. |++++..+.. |.||||+|+..|+.++++
T Consensus       111 ~~~~ei~~~Ll~~~~~~~~~~~----~~~~~~~~~~~~~~~~iv~~Ll~~-gadin~~~~~~g~tpLh~A~~~~~~~iv~  185 (477)
T PHA02878        111 NRNVEIFKIILTNRYKNIQTID----LVYIDKKSKDDIIEAEITKLLLSY-GADINMKDRHKGNTALHYATENKDQRLTE  185 (477)
T ss_pred             cCCHHHHHHHHhCcccCcccCc----HHHHhhccchhhHHHHHHHHHHHc-CCCCCccCCCCCCCHHHHHHhCCCHHHHH
Confidence            7889999999887654321111    011111111111 14588999988 9999998888 999999999999999999


Q ss_pred             HHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHc-CCHHHHHHHHhccCCcccc
Q psy8109         773 FLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFH-NQLDIIKLLLKYNADINAE  851 (1011)
Q Consensus       773 ~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~-g~~~iv~~Ll~~ga~in~~  851 (1011)
                      +|++.|++++..+..|.||||.|+..|+.+++++|+++|++++. .+..|.||||+|+.. ++.+++++|+++|+++|.+
T Consensus       186 ~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~-~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~  264 (477)
T PHA02878        186 LLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDA-RDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAK  264 (477)
T ss_pred             HHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCcc
Confidence            99999999999999999999999999999999999999999987 778899999999975 6889999999999999988


Q ss_pred             cC-CCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhC-CHHHHHHhhh------ccCc----------
Q psy8109         852 DK-YGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEK-HVAKLRAANI------YVDK----------  913 (1011)
Q Consensus       852 d~-~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~-~~~~~~~~~~------~~~~----------  913 (1011)
                      +. .|.||||+|  .++.+++++|+++|||++..|..|.|||++|+..+ ..++.+.+-.      +...          
T Consensus       265 ~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~  342 (477)
T PHA02878        265 SYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFID  342 (477)
T ss_pred             CCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHH
Confidence            75 799999999  56788999999999999999999999999998754 2333332210      1111          


Q ss_pred             chhhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhHhh-cCchhHHHhhhchhhhhccccccccccccccccccc
Q psy8109         914 NIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILS-KHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVIC  992 (1011)
Q Consensus       914 ~~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  992 (1011)
                      +.......+...++...|..||..|+.+++++  .+++++++. ++...+.+|.++|.|.+....     .|++|+++|.
T Consensus       343 n~~~i~~~~~~~~~~~~c~~ei~~mk~~~i~~--~~s~~~~~~~~n~~~~~~~~~n~~i~~~~~~-----~~~iY~~~i~  415 (477)
T PHA02878        343 NMDCITSNKRLNQIKDKCEDELNRLASIKITN--TYSFDDFLKCDNSTLLCKLVNNSIIDDILID-----SFNIYGNIIK  415 (477)
T ss_pred             HHHHHhccHHHHHHHHHHHHHHHHHhheeeCC--ceeeehhhhcCChHHHHHHhcChHHHHHHHH-----hhHHHHHHHH
Confidence            01111123556778889999999999999975  368888874 344455678999988765322     4999999999


Q ss_pred             hhHHHHHHHhhhhhcc
Q psy8109         993 CKFTKVLNSLKNKNKA 1008 (1011)
Q Consensus       993 ~~~~~~~~~~~~~~~~ 1008 (1011)
                      ..+....+|-+.=+++
T Consensus       416 ~~I~~~~~r~~~i~~~  431 (477)
T PHA02878        416 KNIYRARKRLLLIEGA  431 (477)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999887655443

>KOG0510|consensus

Probab=100.00  E-value=4.3e-41  Score=368.71  Aligned_cols=362  Identities=27%  Similarity=0.302  Sum_probs=265.9

Q ss_pred             HHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhccCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccc
Q psy8109         504 EIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITM  583 (1011)
Q Consensus       504 ~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~  583 (1011)
                      +...++++....+...+..|.+++|.++..+..     +-+.+.....|..+.+|||+|+.....+.+++|++.|+++..
T Consensus        42 D~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~-----~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~  116 (929)
T KOG0510|consen   42 DRHTLILEKNSSTPGKRAFGDTELHHASARNYI-----LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPL  116 (929)
T ss_pred             HHHHHHHHhccccchhhhhchhHHHHHHhhcch-----hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCCCh
Confidence            456666666666666667777777777776654     111133445667777788888888888888888888877654


Q ss_pred             cC--CCCHHHHHHHcCChhhHHHHHh-hccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHH
Q psy8109         584 YK--NDSPLHLACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFAC  660 (1011)
Q Consensus       584 ~~--~~t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~  660 (1011)
                      .+  ..+|+|+|+..|+.+.++.|++ +.++|..+..|.||||.|+..++.+..+.|++ .|+++...+.+|.+|+|.|+
T Consensus       117 ~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~-~~a~~~K~~~~~~~~iH~aa  195 (929)
T KOG0510|consen  117 RNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELIN-KGADPCKSDIDGNFPIHEAA  195 (929)
T ss_pred             hhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHh-cCCCCCcccCcCCchHHHHH
Confidence            32  2255555555555555555555 45556666666666666666666665566666 66666666666666666666


Q ss_pred             HcCCHHHHHHHHH-----CCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHH
Q psy8109         661 YDKRLDLVEILLE-----ANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCN  734 (1011)
Q Consensus       661 ~~g~~~iv~~Ll~-----~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~  734 (1011)
                      ..|..++.+..+.     ++..++..++ +.+|||.|+. .|+.++++..+++|........+         +      .
T Consensus       196 ~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve-~g~~e~lk~~L~n~~~~a~~~~~---------~------~  259 (929)
T KOG0510|consen  196 RSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVE-GGDIEMLKMCLQNGKKIADVQLD---------A------M  259 (929)
T ss_pred             HhcchhhhhhhhccccchhhcccccccCCCCcchhhhhh-cCCHHHHHHHHhCccccchhhhH---------H------H
Confidence            6666666666665     4555555554 5666666666 66666666666665543211100         0      1


Q ss_pred             HHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHH-cCCC
Q psy8109         735 DIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLE-YNAD  813 (1011)
Q Consensus       735 ~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~-~g~~  813 (1011)
                      ...+.|       ++..|.+|.||||+|+..|+++.|+.|+..|++++.++.++.||||.||+.|+.+.|+.||+ .|..
T Consensus       260 ~q~kel-------v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~r  332 (929)
T KOG0510|consen  260 QQEKEL-------VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTR  332 (929)
T ss_pred             HHHHHH-------hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCcc
Confidence            111112       34568899999999999999999999999999999999999999999999999999999999 5544


Q ss_pred             ccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcc---cccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCC
Q psy8109         814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN---AEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT  890 (1011)
Q Consensus       814 ~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in---~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t  890 (1011)
                      .-...|-.|.||||.|+.+||..++++|++.||...   ..|.+|.||||+|+..|+..+|++|+.+||+++..++.|.+
T Consensus       333 llne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~S  412 (929)
T KOG0510|consen  333 LLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKS  412 (929)
T ss_pred             ccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccc
Confidence            322378899999999999999999999999999887   56999999999999999999999999999999999999999


Q ss_pred             HHhh
Q psy8109         891 FESS  894 (1011)
Q Consensus       891 ~l~~  894 (1011)
                      ++++
T Consensus       413 A~~~  416 (929)
T KOG0510|consen  413 AFDT  416 (929)
T ss_pred             cccc
Confidence            9996

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.9e-39  Score=363.73  Aligned_cols=494  Identities=18%  Similarity=0.190  Sum_probs=302.5

Q ss_pred             HHHHHcCCCcccccCCCChHHHH-HHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHH-cCCHHHHHHHHhcCccccc
Q psy8109         442 HSIIEAGADIKAKLMDGTTALHL-ACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIK-NNHLEIFNLLLKLGADVAV  518 (1011)
Q Consensus       442 ~~Ll~~g~~~~~~~~~g~t~L~~-Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~-~g~~~iv~~Ll~~ga~~~~  518 (1011)
                      +.++.-|..++..+.+|.+++|+ |+.+|++++|++|++ |+++|..+..+.+|+++|+. .++++++++|+++|++++.
T Consensus        55 ~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~  134 (631)
T PHA02792         55 DVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCS  134 (631)
T ss_pred             HHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCccc
Confidence            33444444445555555566653 445566666666666 56666666666666666644 5777777777777777766


Q ss_pred             ccCCCCCHHHHHHHhCC-HHHHHHHHhc---cCCCCCCCCCCCHHHHHHhcC-------CHHHHHHHHhCCCCccccCCC
Q psy8109         519 KMKSNFTCLHVACEFAS-IEMVSFLLSH---IGVNLQDNKGCTPLHCAIVGN-------QLEVFNHLINSNADITMYKND  587 (1011)
Q Consensus       519 ~~~~~~t~L~~A~~~g~-~~iv~~Ll~~---~~~~~~~~~g~t~L~~A~~~g-------~~eiv~~Ll~~~~~~~~~~~~  587 (1011)
                      .+..|.||+..-+.... .+.-..+-+.   ..++..+..|.||||+|+..+       +.++++.|+++|++++..   
T Consensus       135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~---  211 (631)
T PHA02792        135 NIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYY---  211 (631)
T ss_pred             ccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCcc---
Confidence            66777777665443211 1111111100   124566777888888888888       788888888888876443   


Q ss_pred             CHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcC--CHHHHHHHHhhCCCCcccCCCCCCcHHHHHHH----
Q psy8109         588 SPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHG--CLEAVKFLLNTKNIDVNHKTKDGSTALFFACY----  661 (1011)
Q Consensus       588 t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~----  661 (1011)
                                                 |..|.||||+|+.+.  ..+++++|+. ...+.    ......|..-..    
T Consensus       212 ---------------------------d~~g~t~l~~~~~~~~i~~ei~~~L~~-~~~~~----~~~~~~l~~y~~~~~~  259 (631)
T PHA02792        212 ---------------------------TYREHTTLYYYVDKCDIKREIFDALFD-SNYSG----NELMNILSNYLRKQYR  259 (631)
T ss_pred             ---------------------------CCCCChHHHHHHHcccchHHHHHHHHh-ccccc----cchHhHHHHHHHHHhc
Confidence                                       334555555555555  4555555554 11000    001111111110    


Q ss_pred             --cC--CHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCC-HHHH
Q psy8109         662 --DK--RLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD-CNDI  736 (1011)
Q Consensus       662 --~g--~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~-~~~i  736 (1011)
                        ..  ...+|..|++.+..-+..        .++.....-+.+-.++.+..++        -+-.||.-...+. ..++
T Consensus       260 ~~~~~id~~iv~~ll~~~~~~~i~--------~~~~~~~~~~~~~~~~~~~~~~--------~q~~l~~Yl~~~~v~iei  323 (631)
T PHA02792        260 NKNHKIDNYIVDKLLSGHDTFYIL--------ELCNSLRNNIIISSILKRYTDS--------IQDLLSEYVSYHTVYINV  323 (631)
T ss_pred             cCccCccHHHHHHHHhCCCccchh--------hhhhhhhhhhHHHHHHHHHhHH--------HHHHHHHHHhcCCccHHH
Confidence              01  234777777655422211        1110001111111111110000        1123344444431 2899


Q ss_pred             HHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCC--CCcccccccCChH---HHHHHHHHcC
Q psy8109         737 ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKD--TSPLLSSCRQGLY---EIVDTLLEYN  811 (1011)
Q Consensus       737 v~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g--~t~L~~A~~~g~~---~iv~~Ll~~g  811 (1011)
                      +++|+++ |+++.  ......+++.|+..|+.++|++|+++||+++..|..|  .||||.|+.....   +++++|+++|
T Consensus       324 IK~LId~-Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G  400 (631)
T PHA02792        324 IKCMIDE-GATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYI  400 (631)
T ss_pred             HHHHHHC-CCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcC
Confidence            9999999 88865  2235667889999999999999999999999988775  5899987766543   4689999999


Q ss_pred             CCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHH---c-------CCHHHHHHHHhcCCCc
Q psy8109         812 ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQ---A-------KNWDIVTFLLDAGSNI  881 (1011)
Q Consensus       812 ~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~---~-------g~~~iv~~Ll~~ga~~  881 (1011)
                      +++|. .+..|+||||+|+..++.+++++|+++|+++|.+|..|+|||++|+.   .       ...+++++|+++|.++
T Consensus       401 ADIN~-kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i  479 (631)
T PHA02792        401 DDINK-IDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI  479 (631)
T ss_pred             Ccccc-ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence            99998 88999999999999999999999999999999999999999999976   2       2356799999999887


Q ss_pred             ccccccCCCHHhhH------HhhCCHHHHHHhhhc---cCcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhh
Q psy8109         882 EKATKYRMTFESSK------VVEKHVAKLRAANIY---VDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFY  952 (1011)
Q Consensus       882 ~~~~~~g~t~l~~a------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~  952 (1011)
                      ...   ..|.....      .......+++.+-.|   .+.... -...+...++..+|.+|+..|+..++++   .++|
T Consensus       480 ~~i---~~T~~~~~~~~~~~~~~~n~~~Ik~~I~Y~f~~d~~~~-~~~f~~~~~~I~~CekeI~~Mk~~kI~~---~svy  552 (631)
T PHA02792        480 ECI---KKTVDYLSNDRYLLIGNKNKSLLKICIKYFILVDYKYT-CDMYPSYIEYITDCEKEIADMRQIKING---TDML  552 (631)
T ss_pred             hHH---HHHHHHHhhcccchhhhhhHHHHHHHHHHHHhhccchh-hhhcccHHHHHHHHHHHHHHHHhheeCC---eEEE
Confidence            632   11221110      000111222221111   010000 0011335667889999999999999987   5677


Q ss_pred             hH-hhcCchhHHHhhhchhhhhccccccccccccccccccchhHHHHHHHhh
Q psy8109         953 DI-LSKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLNSLK 1003 (1011)
Q Consensus       953 ~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1011)
                      |+ +.++.+..-+|.++|.+.++.     +.+|+||++.|.- +.+.++|-|
T Consensus       553 diiFn~n~~~~~Ryi~n~~~~k~~-----~~~~~iY~~~I~~-i~~~I~~sk  598 (631)
T PHA02792        553 TVMYKLNKPTKKRYVNNPVFTEWA-----KKQYKFYNQIIYN-ANKLIEQSK  598 (631)
T ss_pred             EEEecCCcchhhhhhcChHHHHHH-----HhhhHHHHHHHHH-HHHHHHHHH
Confidence            76 466667778899999988843     4458899988833 455555543

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.4e-39  Score=378.99  Aligned_cols=387  Identities=20%  Similarity=0.225  Sum_probs=293.9

Q ss_pred             cCChhhHHHHHh-hccccccCCCCCcHHHHHHHc--CCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcC------CHH
Q psy8109         596 TGNMDMITYAMK-YFDVNIENDIGETPLHVAVSH--GCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK------RLD  666 (1011)
Q Consensus       596 ~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~--g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g------~~~  666 (1011)
                      ..+.+++++|++ ++++|.. ..|.|||+.++..  ++.++|++|++ .|+++|..+ .+.|||+.|+.++      +.+
T Consensus        13 ~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~-~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~   89 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLID-NGADVNYKG-YIETPLCAVLRNREITSNKIKK   89 (494)
T ss_pred             cCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHH-cCCCccCCC-CCCCcHHHHHhccCcchhhHHH
Confidence            467899999998 8888887 5688888765543  36899999999 899999876 5689999887654      468


Q ss_pred             HHHHHHHCCCCCcCCCC-CCcHHHHHHHc--CCCHHHHHHHHhCCCCC-CccCCCCCCCcHHHHHHHC--CCHHHHHHHH
Q psy8109         667 LVEILLEANADVNLGDG-TYTPLYTALMK--DPSLDIIKMLVKYGADV-NLTNEACYYMTPLHYASYR--GDCNDIARFL  740 (1011)
Q Consensus       667 iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~--~~~~~iv~~Ll~~g~~~-~~~~~~~~~~t~l~~A~~~--g~~~~iv~~L  740 (1011)
                      ++++|+++|++++..+. +.|||+.|+..  .++.+++++|+++|+++ +..+..  |.||||+|+..  ++ .+++++|
T Consensus        90 iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~--g~tpLh~a~~~~~~~-~~iv~~L  166 (494)
T PHA02989         90 IVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSR--GYNLLHMYLESFSVK-KDVIKIL  166 (494)
T ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCC--CCCHHHHHHHhccCC-HHHHHHH
Confidence            99999999999998887 88999987753  36889999999999999 677766  89999998764  46 8999999


Q ss_pred             HHhcCCCccc-ccCCCccHHHHHHhC----CCHHHHHHHHHCCCCCCCCCcCCCCcccccccC------ChHHHHHHHHH
Q psy8109         741 VEECNADITL-RNFNNRTALNFAAFG----NNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQ------GLYEIVDTLLE  809 (1011)
Q Consensus       741 l~~~g~~~~~-~~~~g~t~L~~Aa~~----g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~------g~~~iv~~Ll~  809 (1011)
                      ++. |++++. .+..|.||||.|+..    ++.+++++|+++|++++..+..+.||||.++..      +..+++++|+.
T Consensus       167 l~~-Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~  245 (494)
T PHA02989        167 LSF-GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK  245 (494)
T ss_pred             HHc-CCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh
Confidence            998 999888 577899999988765    489999999999999999988889999876543      45678887665


Q ss_pred             cCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCC
Q psy8109         810 YNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRM  889 (1011)
Q Consensus       810 ~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~  889 (1011)
                       |+++|. .+..|+||||+|+..|+.++|++|+++|+|+|.+|..|+||||+|+..|+.++|++|++.+...+....   
T Consensus       246 -~advn~-~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~~~~i~~---  320 (494)
T PHA02989        246 -YIKINK-KDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGKYLIKK---  320 (494)
T ss_pred             -CCCCCC-CCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCChHHHHH---
Confidence             689987 778899999999999999999999999999999999999999999999999999999998765442211   


Q ss_pred             CHHhhHHhhCCHH---------HHHHhhhc-cCcch-hh---hhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhHh
Q psy8109         890 TFESSKVVEKHVA---------KLRAANIY-VDKNI-MV---QFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDIL  955 (1011)
Q Consensus       890 t~l~~a~~~~~~~---------~~~~~~~~-~~~~~-~~---~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i~  955 (1011)
                       .+.+....+-.+         +...+..+ +.... .+   ........++..+|..||..|+.++++..  .|+||++
T Consensus       321 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~C~~Ei~~mk~~~i~~~--~sl~di~  397 (494)
T PHA02989        321 -TFEYFSEHGINDLFFNEKKMLMMILLMQYSFTIYPIFYKNCYEVRLAFPNIIERYEKDLLLMKKETVGKN--LSVYDLV  397 (494)
T ss_pred             -HHHHHHHhCchHHhhhhHHHHHHHHHHHHHHhcCHHHHhccHHHHHHHHHHHHHHHHHHHHHhhceeCCC--ceEEeee
Confidence             011111111111         11100000 00000 00   11123456888999999999999999853  7899886


Q ss_pred             h-cCchhHH-HhhhchhhhhccccccccccccccccccchhHHHHHHHhhh
Q psy8109         956 S-KHPAQVE-FYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLNSLKN 1004 (1011)
Q Consensus       956 ~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1011)
                      . ++.+... +|.+++.+.+.   .    .|++|+..|..-+...+.|-+.
T Consensus       398 ~~~~~~~~~~~~~~~~~~~~~---~----~~~iY~~~i~~~I~~~~~r~~~  441 (494)
T PHA02989        398 FNREKEIIPVKFLKNENFLKF---K----SSILYGEKIKQIILNSYEYYNC  441 (494)
T ss_pred             ecCCCCcccceeeccHHHHhh---h----hhHHHHHHHHHHHHHHHHHHHH
Confidence            3 3333333 68888887763   2    4999999999888877776544

>KOG0510|consensus

Probab=100.00  E-value=5.5e-39  Score=352.21  Aligned_cols=411  Identities=26%  Similarity=0.300  Sum_probs=325.5

Q ss_pred             HHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCccccc
Q psy8109         439 EVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAV  518 (1011)
Q Consensus       439 ~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~  518 (1011)
                      +...++++..+.+......|.+++|.|+..+..     +-+.......|..+.+|||+|+.....+.+++|++.|++++.
T Consensus        42 D~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~-----~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~  116 (929)
T KOG0510|consen   42 DRHTLILEKNSSTPGKRAFGDTELHHASARNYI-----LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPL  116 (929)
T ss_pred             HHHHHHHHhccccchhhhhchhHHHHHHhhcch-----hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCCCh
Confidence            667777777777777777888888888877755     222344456677788888888888888888888888888888


Q ss_pred             ccCCCCCHHHHHHHhCCHHHHHHHHhc-cCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcC
Q psy8109         519 KMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATG  597 (1011)
Q Consensus       519 ~~~~~~t~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g  597 (1011)
                      .+..+.+|+|+|+..|..+.++.|+++ ++++..+..+.||||.|+..++.|..+.|+..|+++.               
T Consensus       117 ~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~---------------  181 (929)
T KOG0510|consen  117 RNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPC---------------  181 (929)
T ss_pred             hhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCC---------------
Confidence            888888888888888888888888887 7888888888888888888888887777888777653               


Q ss_pred             ChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCC----CCcccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy8109         598 NMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKN----IDVNHKTKDGSTALFFACYDKRLDLVEILLE  673 (1011)
Q Consensus       598 ~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g----~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~  673 (1011)
                                     -.+..|.+|+|.|+.+|..++.+.++..+|    ..+|..+..+.||||.|+..|+.++++..|+
T Consensus       182 ---------------K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~  246 (929)
T KOG0510|consen  182 ---------------KSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQ  246 (929)
T ss_pred             ---------------cccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHh
Confidence                           356779999999999999999999998444    5688899999999999999999999999999


Q ss_pred             CCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccC
Q psy8109         674 ANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNF  753 (1011)
Q Consensus       674 ~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~  753 (1011)
                      .|........            +...-.+.|+      +..+.+  |+||||+|++.|+ .+.+..|+.. |++++.++.
T Consensus       247 n~~~~a~~~~------------~~~~q~kelv------~~~d~d--g~tpLH~a~r~G~-~~svd~Ll~~-Ga~I~~kn~  304 (929)
T KOG0510|consen  247 NGKKIADVQL------------DAMQQEKELV------NDEDND--GCTPLHYAARQGG-PESVDNLLGF-GASINSKNK  304 (929)
T ss_pred             Cccccchhhh------------HHHHHHHHHh------hccccc--CCchHHHHHHcCC-hhHHHHHHHc-CCcccccCC
Confidence            8876542211            1111222222      223344  9999999999999 9999999999 999999999


Q ss_pred             CCccHHHHHHhCCCHHHHHHHHH-CC-CCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccc--cccCCCChHHHHH
Q psy8109         754 NNRTALNFAAFGNNLDLLKFLLK-AG-ADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL--RTIKHGSTALHTA  829 (1011)
Q Consensus       754 ~g~t~L~~Aa~~g~~~iv~~Ll~-~g-ad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~--~~~~~g~t~L~~A  829 (1011)
                      ++.||||.||..|++..|+.||+ .| ...|..|..|.||||.|+++||..+|++|++.|+....  ..|.+|.||||.|
T Consensus       305 d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~A  384 (929)
T KOG0510|consen  305 DEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLA  384 (929)
T ss_pred             CCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHH
Confidence            99999999999999999999999 44 46788899999999999999999999999999999874  2489999999999


Q ss_pred             HHcCCHHHHHHHHhccCCcccccCCCCCHHHHHH---------H------------cCCHHHHHHHHhcCCCcccccccC
Q psy8109         830 AFHNQLDIIKLLLKYNADINAEDKYGKIAFHSAC---------Q------------AKNWDIVTFLLDAGSNIEKATKYR  888 (1011)
Q Consensus       830 a~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~---------~------------~g~~~iv~~Ll~~ga~~~~~~~~g  888 (1011)
                      +..|+..+|++|+.+|++|...++.|.+|+++--         +            .--.+++++.++.-.......+++
T Consensus       385 a~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~~~~~~~p~~~~~~~~n~c~~~~~i~~~pe~~e~vlD~c~l~~~e~~~~  464 (929)
T KOG0510|consen  385 AKYGNTSAVQKLISHGADIGVKNKKGKSAFDTRPDRCLPVFVHRSPFNKCPTTELIEPLPECFEIVLDFCILKSQERKDS  464 (929)
T ss_pred             HHhccHHHHHHHHHcCCceeeccccccccccccccccccHHHhhCCCCCcchhhhhccchHHHHHHHHHHHHHHhhccCC
Confidence            9999999999999999999999999999988411         1            112456676666543333344455


Q ss_pred             CCHHh--------hHHhhCCHHHHHH
Q psy8109         889 MTFES--------SKVVEKHVAKLRA  906 (1011)
Q Consensus       889 ~t~l~--------~a~~~~~~~~~~~  906 (1011)
                      .||+.        ..+..+..+.+++
T Consensus       465 ~~~~Q~~~~~~~~~mv~~~~~eLL~H  490 (929)
T KOG0510|consen  465 PTPLQDEAAPILNIMVDKEQIELLEH  490 (929)
T ss_pred             CChhhhhhhhHHHHHhhhhHHHHhcC
Confidence            55554        3444555555544

>KOG0508|consensus

Probab=100.00  E-value=4.4e-39  Score=331.12  Aligned_cols=198  Identities=28%  Similarity=0.436  Sum_probs=185.8

Q ss_pred             CCCCcchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q psy8109         210 SHSQGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIE  288 (1011)
Q Consensus       210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~  288 (1011)
                      ...+|.|||..||++||.++|++|+++ ++++....   .+.|+...++|.+||+.|+..||+++|+.|+++|+++|..+
T Consensus        38 ~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~G---sV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT  114 (615)
T KOG0508|consen   38 EVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGG---SVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTT  114 (615)
T ss_pred             cccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCc---eEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccccc
Confidence            467899999999999999999999994 67665443   35778888899999999999999999999999999999887


Q ss_pred             cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHH
Q psy8109         289 KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAI  368 (1011)
Q Consensus       289 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~  368 (1011)
                      .. +.|||..||..||+++|+||+++|+  ++++.+..|.|+||+||..||.+|+++|++.|+|+|.++..|+|+||.|+
T Consensus       115 ~T-NStPLraACfDG~leivKyLvE~ga--d~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~ca  191 (615)
T KOG0508|consen  115 RT-NSTPLRAACFDGHLEIVKYLVEHGA--DPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCA  191 (615)
T ss_pred             cc-CCccHHHHHhcchhHHHHHHHHcCC--CCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhh
Confidence            77 7899999999999999999999999  78999999999999999999999999999999999999999999999999


Q ss_pred             HcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHh
Q psy8109         369 AQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLK  413 (1011)
Q Consensus       369 ~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~  413 (1011)
                      ++|+++++++|+.+|+.+.....|.|||..|+..|+.++|++|++
T Consensus       192 EsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  192 ESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             hcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHHHHhc
Confidence            999999999999999999999889999999999999999999996

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.8e-38  Score=367.64  Aligned_cols=392  Identities=20%  Similarity=0.238  Sum_probs=305.1

Q ss_pred             ChhhHHHHHhhccccccCCCCCcHHHHHH--HcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHc-----CCHHHHHH
Q psy8109         598 NMDMITYAMKYFDVNIENDIGETPLHVAV--SHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYD-----KRLDLVEI  670 (1011)
Q Consensus       598 ~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~--~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~-----g~~~iv~~  670 (1011)
                      ..+.|+.|+...+++.. ..+.|+++.+.  ..++.+++++|++ .|++++..+..|.||||.|+.+     ++.+++++
T Consensus        17 ~~~~v~~ll~~~~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~-~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~   94 (489)
T PHA02798         17 KLSTVKLLIKSCNPNEI-VNEYSIFQKYLQRDSPSTDIVKLFIN-LGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKI   94 (489)
T ss_pred             cHHHHHHHHhcCChhhh-cccchHHHHHHhCCCCCHHHHHHHHH-CCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHH
Confidence            34566666664443333 34566665443  3457899999998 8999999999999999988764     66899999


Q ss_pred             HHHCCCCCcCCCC-CCcHHHHHHHcC--CCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCC--HHHHHHHHHHhcC
Q psy8109         671 LLEANADVNLGDG-TYTPLYTALMKD--PSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD--CNDIARFLVEECN  745 (1011)
Q Consensus       671 Ll~~ga~~~~~~~-~~t~L~~aa~~~--~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~--~~~iv~~Ll~~~g  745 (1011)
                      |+++|++++..+. +.||||.|+...  ++.+++++|+++|++++..+..  |.||||+|+..++  ..+++++|++. |
T Consensus        95 Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~--g~tpL~~a~~~~~~~~~~vv~~Ll~~-g  171 (489)
T PHA02798         95 LIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKD--GFTMLQVYLQSNHHIDIEIIKLLLEK-G  171 (489)
T ss_pred             HHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCC--CCcHHHHHHHcCCcchHHHHHHHHHh-C
Confidence            9999999998887 899999998732  4789999999999999998887  9999999999875  37999999998 9


Q ss_pred             CCccccc-CCCccHHHHHHhC----CCHHHHHHHHHCCCCCCCCCcCCCCccc-------ccccCChHHHHHHHHHcCCC
Q psy8109         746 ADITLRN-FNNRTALNFAAFG----NNLDLLKFLLKAGADPDILDLKDTSPLL-------SSCRQGLYEIVDTLLEYNAD  813 (1011)
Q Consensus       746 ~~~~~~~-~~g~t~L~~Aa~~----g~~~iv~~Ll~~gad~~~~d~~g~t~L~-------~A~~~g~~~iv~~Ll~~g~~  813 (1011)
                      ++++..+ ..|.||||.++..    ++.+++++|+++|++++..+..|.++++       .+...++.+++.+|+. |++
T Consensus       172 adin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~d  250 (489)
T PHA02798        172 VDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YID  250 (489)
T ss_pred             CCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCC
Confidence            9999875 5789999998764    5899999999999999999988998876       3566778899988776 699


Q ss_pred             ccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHh
Q psy8109         814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFES  893 (1011)
Q Consensus       814 ~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~  893 (1011)
                      +|. .+..|+||||+|+.+|+.+++++|+++|+|+|.+|..|+|||++|+..++.++++.|+++|++++..+........
T Consensus       251 vN~-~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i~~~~~~~~~  329 (489)
T PHA02798        251 INQ-VDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNTISYTYYKLRK  329 (489)
T ss_pred             CCC-cCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHHHHHHHHHHhh
Confidence            998 7889999999999999999999999999999999999999999999999999999999999999865433222111


Q ss_pred             hHHhh-------CCHHHHHHhhh---ccCcch-----hhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhHhhcC
Q psy8109         894 SKVVE-------KHVAKLRAANI---YVDKNI-----MVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILSKH  958 (1011)
Q Consensus       894 ~a~~~-------~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i~~~~  958 (1011)
                      .....       ...++++.+-.   .+.++.     ....+.....+|..+|.+||..|+.+++++   .|+|||+...
T Consensus       330 ~~~~~~~~~~~~~~~~~i~~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~C~~Ei~~Mk~~~i~~---~s~~di~~~~  406 (489)
T PHA02798        330 HILNVEGDFINQLEFDIIKKFIAYVILYVKNFSIRNLTYPFIFTYFDDFIEKCTKSINEIHNTYVNN---ETIFQICFNK  406 (489)
T ss_pred             hhccccceecchHHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHHHHHHHHHhhhCC---ceeeehcccC
Confidence            10000       01122221111   111111     112223445789999999999999999986   5889986433


Q ss_pred             chhHHHhhhchhhhhccccccccccccccccccchhHHHHHHHhhhhh
Q psy8109         959 PAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVLNSLKNKN 1006 (1011)
Q Consensus       959 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1011)
                      .+..-+|.++|.+.++       ..|++|+..|..-+.....|-+.-+
T Consensus       407 ~~~~~~~~~~~~~~~~-------~~~~iY~~~i~~~I~~~~~r~~~i~  447 (489)
T PHA02798        407 KYIPIKYINNKKLKKY-------TKLFYYGNIIKKIIEKSKKRYENIY  447 (489)
T ss_pred             ceeeeeEeccHHHhhh-------hccHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344568888877663       3599999999998888887766533

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.8e-37  Score=356.35  Aligned_cols=304  Identities=24%  Similarity=0.370  Sum_probs=267.5

Q ss_pred             hHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCc
Q psy8109         216 KALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRT  294 (1011)
Q Consensus       216 t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t  294 (1011)
                      ..|..|+..|++++|+.|++. +..++....           .+.||||.|+..|+.++|++|++.|++++..+.. |.|
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~-----------~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~-~~t   70 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVD-----------ETTTPLIDAIRSGDAKIVELFIKHGADINHINTK-IPH   70 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCC-----------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCC
Confidence            468899999999999999975 444555554           7889999999999999999999999999887766 999


Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChh
Q psy8109         295 ALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE  374 (1011)
Q Consensus       295 ~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~  374 (1011)
                      ||+.|+..|+.++|++|+++|++  +..          .+....+.+++++|++.|++++..+..|.||||+|+..|+.+
T Consensus        71 ~L~~A~~~~~~~iv~~Ll~~g~~--~~~----------~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~  138 (434)
T PHA02874         71 PLLTAIKIGAHDIIKLLIDNGVD--TSI----------LPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLE  138 (434)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCC--CCc----------chhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHH
Confidence            99999999999999999999983  321          233456789999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcc
Q psy8109         375 VFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIK  452 (1011)
Q Consensus       375 iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~  452 (1011)
                      +|++|+++|++++.. ..|.||||+|+..|+.+++++|++++ +++..+..|.||||.|+.. ++.+++++|++.|++++
T Consensus       139 ~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~-g~~~iv~~Ll~~g~~i~  217 (434)
T PHA02874        139 SIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEY-GDYACIKLLIDHGNHIM  217 (434)
T ss_pred             HHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHhCCCCCc
Confidence            999999999999887 77899999999999999999999998 7788889999999996654 38999999999999998


Q ss_pred             cccCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHhcCcccccccCCCCCHHHHHH
Q psy8109         453 AKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNN-HLEIFNLLLKLGADVAVKMKSNFTCLHVAC  531 (1011)
Q Consensus       453 ~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g-~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~  531 (1011)
                      ..+..|.||||.|+..++ +++++|+.+.+++..+..|.||||+|+..+ +.+++++|++.|++++..+..|.|||+.|+
T Consensus       218 ~~~~~g~TpL~~A~~~~~-~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~  296 (434)
T PHA02874        218 NKCKNGFTPLHNAIIHNR-SAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAF  296 (434)
T ss_pred             CCCCCCCCHHHHHHHCCh-HHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence            888899999999998765 677788888888999999999999999865 789999999999999999999999999998


Q ss_pred             HhC-CHHHHHHHHhc
Q psy8109         532 EFA-SIEMVSFLLSH  545 (1011)
Q Consensus       532 ~~g-~~~iv~~Ll~~  545 (1011)
                      ..+ ..++++.|+..
T Consensus       297 ~~~~~~~~ik~ll~~  311 (434)
T PHA02874        297 KYINKDPVIKDIIAN  311 (434)
T ss_pred             HhCCccHHHHHHHHh
Confidence            887 67788888876

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.8e-37  Score=353.56  Aligned_cols=340  Identities=22%  Similarity=0.242  Sum_probs=214.4

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCC
Q psy8109         618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPS  697 (1011)
Q Consensus       618 g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~  697 (1011)
                      .+++|+.|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|+++|++++....              
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~-~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~--------------   66 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLD-IGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYP--------------   66 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCC--------------
Confidence            4567888888888888888887 7777777777788888888887777777777777776654422              


Q ss_pred             HHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCc-ccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109         698 LDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADI-TLRNFNNRTALNFAAFGNNLDLLKFLLK  776 (1011)
Q Consensus       698 ~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~-~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  776 (1011)
                                         .  +.||||.|+..|+ .+++++|++. |... +..+..|.||||+|+..|+.+++++|++
T Consensus        67 -------------------~--~~t~L~~A~~~g~-~~~v~~Ll~~-~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~  123 (413)
T PHA02875         67 -------------------D--IESELHDAVEEGD-VKAVEELLDL-GKFADDVFYKDGMTPLHLATILKKLDIMKLLIA  123 (413)
T ss_pred             -------------------C--cccHHHHHHHCCC-HHHHHHHHHc-CCcccccccCCCCCHHHHHHHhCCHHHHHHHHh
Confidence                               1  4555666666665 5556666555 3332 2334456666666666666666666666


Q ss_pred             CCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC
Q psy8109         777 AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK  856 (1011)
Q Consensus       777 ~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~  856 (1011)
                      +|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++..+..|.
T Consensus       124 ~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~  202 (413)
T PHA02875        124 RGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI-EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGC  202 (413)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCC
Confidence            6666666666666666666666666666666666666665 556666666666666666666666666666666665553


Q ss_pred             -CHHHHHHHcCCHHHHHHHHhcCCCcccc---cccCCCHHhhHHhhC---CHHHHHHh------h---------hccCcc
Q psy8109         857 -IAFHSACQAKNWDIVTFLLDAGSNIEKA---TKYRMTFESSKVVEK---HVAKLRAA------N---------IYVDKN  914 (1011)
Q Consensus       857 -taL~~A~~~g~~~iv~~Ll~~ga~~~~~---~~~g~t~l~~a~~~~---~~~~~~~~------~---------~~~~~~  914 (1011)
                       ||+|+|+..|+.++|++|+++|+|++..   +..+.||++......   ..+.++.+      .         ..+..+
T Consensus       203 ~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li~~i~~~~~~~~~~~~~~~~~n  282 (413)
T PHA02875        203 VAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNMCTNLESEAIDALIADIAIRIHKKTIRRDEGFKNN  282 (413)
T ss_pred             chHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHHHHHHHHhCcccccchhccccc
Confidence             5666666666666666666666666543   445566666543221   11111110      0         011122


Q ss_pred             hhhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhHhh--cCc-----hhHHHhhhchhhhhcccccccccccccc
Q psy8109         915 IMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDILS--KHP-----AQVEFYAKNPQISNCVKWKDLNLQFPIY  987 (1011)
Q Consensus       915 ~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  987 (1011)
                      ...........++...|..||..|+.++.++   .++||++.  ++.     +.+.++..  .+.      .+...|++|
T Consensus       283 ~~~i~~~~~l~~~~~~C~~ei~~mk~~~i~~---~s~~di~~~~~~~~~~~~~~~~~~~~--~i~------~~~~~~~iY  351 (413)
T PHA02875        283 MSTIEDKEEFKDVFEKCIIELRRIKSEKIGK---KNILDLCILEKNSHNLDENILARHSK--KIL------GLNDEAHFY  351 (413)
T ss_pred             HHHhcChHHHHHHHHHHHHHHHHHHhhccCc---eeHHHHHhhhccccccchHHHHHHHH--HHh------ccccceehH
Confidence            2222334567888999999999999999986   68888764  221     12222222  222      112359999


Q ss_pred             ccccchhHHHHHHHhhhhhc
Q psy8109         988 GDVICCKFTKVLNSLKNKNK 1007 (1011)
Q Consensus       988 ~~~~~~~~~~~~~~~~~~~~ 1007 (1011)
                      +.+|...+....+|-+.=++
T Consensus       352 ~~~i~~~i~~~~~R~~li~~  371 (413)
T PHA02875        352 KYLLKEAADIALKRAEAIES  371 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999998888665443

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.2e-36  Score=355.88  Aligned_cols=284  Identities=29%  Similarity=0.384  Sum_probs=211.2

Q ss_pred             HHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcC---CHHHHHHHHHcCCCCcccccCCCCcH
Q psy8109         219 CWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNS---DIELVKLLLEKGANPLAIEKSRNRTA  295 (1011)
Q Consensus       219 ~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g---~~~iv~~Ll~~g~~~~~~~~~~g~t~  295 (1011)
                      ..|+..++.++|++|++.|++++..+.           .|.||||.|+..|   +.++|++|++.|++++..+.. |.||
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~-----------~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~-g~Tp   86 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGE-----------YGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERC-GFTP   86 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCC-----------CCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCC-CCCH
Confidence            456778899999999999999988776           7899999999988   999999999999999888775 9999


Q ss_pred             HHHHHHhC-CHHHHHHHHHcCCCCCCcccCCCCCCHHHHHH--hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC-
Q psy8109         296 LHVAAIVE-SVDIVKLLFDYGAEKSVNVQNVAGLTPLHIAC--RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN-  371 (1011)
Q Consensus       296 L~~Aa~~g-~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa--~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g-  371 (1011)
                      ||+|+..| +.+++++|+++|+  +++.++..|.||||+|+  ..++.+++++|+++|++++..+..|.||||+|+..+ 
T Consensus        87 Lh~A~~~~~~~~iv~lLl~~ga--~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~  164 (471)
T PHA03095         87 LHLYLYNATTLDVIKLLIKAGA--DVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRN  164 (471)
T ss_pred             HHHHHHcCCcHHHHHHHHHcCC--CCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence            99999999 5999999999999  78899999999999999  567889999999999999999999999999988876 


Q ss_pred             -ChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhc--CCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcC-CCHHHHHHHH
Q psy8109         372 -CLEVFNYLVNHGCDLSVP-EGERTALHMASQF--GNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQ-ASLEVFHSII  445 (1011)
Q Consensus       372 -~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~--g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~-~~~~i~~~Ll  445 (1011)
                       +.+++++|+++|++++.. ..+.||||.|+..  ++.+++++|++.| +++..|..|.||||+|+..+ ....++..|+
T Consensus       165 ~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll  244 (471)
T PHA03095        165 ANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLL  244 (471)
T ss_pred             CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHH
Confidence             578899999998887765 5567788777754  5566666666655 55555555555555533322 1234555555


Q ss_pred             HcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCccc
Q psy8109         446 EAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV  516 (1011)
Q Consensus       446 ~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~  516 (1011)
                      +.|++++..+..|.||||+|+..|+.+++++|++ +++++..+..|.|||+.|+..|+.+++++|++.++++
T Consensus       245 ~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~  316 (471)
T PHA03095        245 IAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSA  316 (471)
T ss_pred             HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCH
Confidence            5555555555555555555555555555555555 5555555555555555555555555555555555544

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=5e-36  Score=351.17  Aligned_cols=272  Identities=28%  Similarity=0.423  Sum_probs=256.7

Q ss_pred             CHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHH-----HHHcCCCHHHHHH
Q psy8109         630 CLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYT-----ALMKDPSLDIIKM  703 (1011)
Q Consensus       630 ~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~-----aa~~~~~~~iv~~  703 (1011)
                      ...+++++++ .+...+..+..+.||||.|+..++.+++++|+++|++++..+. +.+|++.     |+. .++.+++++
T Consensus        14 ~~~~~~~~~~-~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~-~~~~~iv~~   91 (480)
T PHA03100         14 KVKNIKYIIM-EDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNL-TDVKEIVKL   91 (480)
T ss_pred             HHHHHHHHHh-cCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHh-hchHHHHHH
Confidence            4567888887 5666677788999999999999999999999999999998777 7899999     888 899999999


Q ss_pred             HHhCCCCCCccCCCCCCCcHHHHHH--HCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCC--CHHHHHHHHHCCC
Q psy8109         704 LVKYGADVNLTNEACYYMTPLHYAS--YRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGN--NLDLLKFLLKAGA  779 (1011)
Q Consensus       704 Ll~~g~~~~~~~~~~~~~t~l~~A~--~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g--~~~iv~~Ll~~ga  779 (1011)
                      |+++|++++..+..  |.||||+|+  ..|+ .+++++|++. |++++..+..|.||||.|+..|  +.+++++|+++|+
T Consensus        92 Ll~~ga~i~~~d~~--g~tpL~~A~~~~~~~-~~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~  167 (480)
T PHA03100         92 LLEYGANVNAPDNN--GITPLLYAISKKSNS-YSIVEYLLDN-GANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGV  167 (480)
T ss_pred             HHHCCCCCCCCCCC--CCchhhHHHhcccCh-HHHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCC
Confidence            99999999888877  999999999  9999 9999999998 9999999999999999999999  9999999999999


Q ss_pred             CCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCC------ChHHHHHHHcCC--HHHHHHHHhccCCcccc
Q psy8109         780 DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHG------STALHTAAFHNQ--LDIIKLLLKYNADINAE  851 (1011)
Q Consensus       780 d~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g------~t~L~~Aa~~g~--~~iv~~Ll~~ga~in~~  851 (1011)
                      +++..+..|.||||+|+..|+.+++++|+++|++++. .+..|      .||||.|+..|+  .+++++|+++|+++|.+
T Consensus       168 din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~  246 (480)
T PHA03100        168 DINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINA-GDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIK  246 (480)
T ss_pred             CcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccC-CCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCC
Confidence            9999999999999999999999999999999999997 55666      899999999999  99999999999999999


Q ss_pred             cCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhh
Q psy8109         852 DKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAAN  908 (1011)
Q Consensus       852 d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~  908 (1011)
                      |..|.||||+|+..|+.+++++|+++|++++..|..|.||+++|+..++.++++.+-
T Consensus       247 d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll  303 (480)
T PHA03100        247 DVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLL  303 (480)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999998764

>KOG0508|consensus

Probab=100.00  E-value=4.7e-36  Score=308.86  Aligned_cols=218  Identities=31%  Similarity=0.396  Sum_probs=174.0

Q ss_pred             HHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCcccc-------cCC
Q psy8109         220 WALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLE-KGANPLAIE-------KSR  291 (1011)
Q Consensus       220 ~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~-------~~~  291 (1011)
                      .|++.|.+..+..|+-...+....+      .......|.|||.+||++||.++|+||++ .++++....       ...
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~------l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~Ie   83 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIIS------LIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIE   83 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHH------HhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccC
Confidence            7788888887777765432211111      11122367899999999999999999998 455543221       123


Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109         292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN  371 (1011)
Q Consensus       292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g  371 (1011)
                      |-+||..|+..||++||+.|+++|+  ++|.......|||-.||.-||+++|+||+++|+|++..+..|.|.||.||..|
T Consensus        84 gappLWaAsaAGHl~vVk~L~~~ga--~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykG  161 (615)
T KOG0508|consen   84 GAPPLWAASAAGHLEVVKLLLRRGA--SVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKG  161 (615)
T ss_pred             CCchhhHHhccCcHHHHHHHHHhcC--ccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccC
Confidence            6689999999999999999999998  88888888889999999999999999999999999999999999999999999


Q ss_pred             ChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCC
Q psy8109         372 CLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGAD  450 (1011)
Q Consensus       372 ~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~  450 (1011)
                      |.+|+++|++.|+|++.. ..|.|+||.+++.|+++++++|+.++                                 +.
T Consensus       162 h~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~g---------------------------------a~  208 (615)
T KOG0508|consen  162 HVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHG---------------------------------AK  208 (615)
T ss_pred             chHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCC---------------------------------ce
Confidence            999999999999999987 77889999999999988888888764                                 32


Q ss_pred             cccccCCCChHHHHHHHcCCHHHHHHHHh
Q psy8109         451 IKAKLMDGTTALHLACYFGNLAMVNYLVK  479 (1011)
Q Consensus       451 ~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  479 (1011)
                      +. .+..|.|||..|+..|+.++|++|++
T Consensus       209 i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  209 ID-VDGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             ee-ecCCCCchHHHHhhhcchHHHHHHhc
Confidence            22 33458888888888888888888885

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.2e-34  Score=336.98  Aligned_cols=296  Identities=24%  Similarity=0.293  Sum_probs=238.9

Q ss_pred             CHHHHHHHcCChhhHHHHHh-hccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHH
Q psy8109         588 SPLHLACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLD  666 (1011)
Q Consensus       588 t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~  666 (1011)
                      +|||.|+..|+.++|++|++ +++++..+..|.||||+|+..|+.+++++|++ .+...+.  ..+.+|++.|+..++.+
T Consensus        39 tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~~~~~~~--~~~~~~l~~a~~~~~~e  115 (477)
T PHA02878         39 IPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIR-SINKCSV--FYTLVAIKDAFNNRNVE  115 (477)
T ss_pred             chHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHH-HHhcccc--ccchhhHHHHHHcCCHH
Confidence            45555555555555555555 44567778889999999999999999999998 4443333  56778999999999999


Q ss_pred             HHHHHHHCCCCCcCCCCCCcHHHHHHH-cCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcC
Q psy8109         667 LVEILLEANADVNLGDGTYTPLYTALM-KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN  745 (1011)
Q Consensus       667 iv~~Ll~~ga~~~~~~~~~t~L~~aa~-~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g  745 (1011)
                      ++++|+..+.+...... ...+..... .....+++++|+++|++++..+.. .|.||||+|+..|+ .+++++|++. |
T Consensus       116 i~~~Ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~-~g~tpLh~A~~~~~-~~iv~~Ll~~-g  191 (477)
T PHA02878        116 IFKIILTNRYKNIQTID-LVYIDKKSKDDIIEAEITKLLLSYGADINMKDRH-KGNTALHYATENKD-QRLTELLLSY-G  191 (477)
T ss_pred             HHHHHHhCcccCcccCc-HHHHhhccchhhHHHHHHHHHHHcCCCCCccCCC-CCCCHHHHHHhCCC-HHHHHHHHHC-C
Confidence            99999987654332111 111111110 112346999999999999877653 28999999999999 9999999998 9


Q ss_pred             CCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccC-ChHHHHHHHHHcCCCccccccCCCCh
Q psy8109         746 ADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQ-GLYEIVDTLLEYNADTNLRTIKHGST  824 (1011)
Q Consensus       746 ~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~-g~~~iv~~Ll~~g~~~~~~~~~~g~t  824 (1011)
                      ++++..+..|.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+.. ++.+++++|+++|++++...+..|.|
T Consensus       192 ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~T  271 (477)
T PHA02878        192 ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLT  271 (477)
T ss_pred             CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999975 79999999999999999855558999


Q ss_pred             HHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcC-CHHHHHHHHhc-----CCCcccccccCCCHH
Q psy8109         825 ALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAK-NWDIVTFLLDA-----GSNIEKATKYRMTFE  892 (1011)
Q Consensus       825 ~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g-~~~iv~~Ll~~-----ga~~~~~~~~g~t~l  892 (1011)
                      |||.|  .++.+++++|+++|+|+|.+|..|.||||+|+..+ +.+++++|+.+     +++++..+..|..+-
T Consensus       272 pLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~n  343 (477)
T PHA02878        272 ALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFIDN  343 (477)
T ss_pred             HHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHHH
Confidence            99999  57889999999999999999999999999999754 56788888765     457777777776543

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.8e-34  Score=333.46  Aligned_cols=277  Identities=23%  Similarity=0.326  Sum_probs=219.9

Q ss_pred             cCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHc--CCHHHHHHHHHcCCCCcccccCCCCcHHHHHHH
Q psy8109         224 EKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILN--SDIELVKLLLEKGANPLAIEKSRNRTALHVAAI  301 (1011)
Q Consensus       224 ~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~--g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~  301 (1011)
                      ..+.++|++|+++|+++|.. .           .|.|||+.++..  ++.++|++|+++|++++..+  .+.|||+.|+.
T Consensus        13 ~~~~~~v~~LL~~GadvN~~-~-----------~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~--~~~tpL~~a~~   78 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNEE-Y-----------RGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG--YIETPLCAVLR   78 (494)
T ss_pred             cCcHHHHHHHHHcCCCcccc-c-----------CCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC--CCCCcHHHHHh
Confidence            47899999999999999876 3           677888765544  47899999999999998764  37899999887


Q ss_pred             hC------CHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhc---CcHHHHHHHHHCCCCC-ccCCCCCCcHHHHHHHc-
Q psy8109         302 VE------SVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRR---KCLEIVKILLDKGADI-NSGNDDGCTPLFCAIAQ-  370 (1011)
Q Consensus       302 ~g------~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~---g~~~iv~~Ll~~ga~~-n~~~~~g~t~L~~A~~~-  370 (1011)
                      ++      +.++|++|+++|+  ++|.++..|.||||.|+.+   |+.++|++|+++|+++ +..+..|.||||+|+.. 
T Consensus        79 ~~~~~~~~~~~iv~~Ll~~Ga--din~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~  156 (494)
T PHA02989         79 NREITSNKIKKIVKLLLKFGA--DINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESF  156 (494)
T ss_pred             ccCcchhhHHHHHHHHHHCCC--CCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhc
Confidence            54      4789999999999  7899999999999988765   6789999999999999 78889999999998764 


Q ss_pred             -CChhHHHHHHhcCCCCCCC--CCCCcHHHHHHhcCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHHHHHHc
Q psy8109         371 -NCLEVFNYLVNHGCDLSVP--EGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEA  447 (1011)
Q Consensus       371 -g~~~iv~~Ll~~g~~~~~~--~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~  447 (1011)
                       ++.++|++|+++|++++..  ..+.|||+.|+..+..                             ..+.+++++|++.
T Consensus       157 ~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~-----------------------------~~~~~iv~~Ll~~  207 (494)
T PHA02989        157 SVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDID-----------------------------VISIKVIKYLIKK  207 (494)
T ss_pred             cCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccc-----------------------------cccHHHHHHHHhC
Confidence             5889999999999998762  4567888877654310                             1134444555555


Q ss_pred             CCCcccccCCCChHHHHHHH------cCCHHHHHHHHhccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccC
Q psy8109         448 GADIKAKLMDGTTALHLACY------FGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMK  521 (1011)
Q Consensus       448 g~~~~~~~~~g~t~L~~Aa~------~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~  521 (1011)
                      |++++..+..+.++||.++.      .+..+++++|+.+++++..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus       208 Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~  287 (494)
T PHA02989        208 GVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSK  287 (494)
T ss_pred             CCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCC
Confidence            56655555556666665443      345778888888888888888888888888888888888888888888888888


Q ss_pred             CCCCHHHHHHHhCCHHHHHHHHhc
Q psy8109         522 SNFTCLHVACEFASIEMVSFLLSH  545 (1011)
Q Consensus       522 ~~~t~L~~A~~~g~~~iv~~Ll~~  545 (1011)
                      .|.||||+|+..|+.+++++|++.
T Consensus       288 ~G~TpL~~A~~~~~~~iv~~LL~~  311 (494)
T PHA02989        288 DGDTVLTYAIKHGNIDMLNRILQL  311 (494)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhc
Confidence            888888888888888888888875

>KOG4369|consensus

Probab=100.00  E-value=2.2e-35  Score=328.49  Aligned_cols=322  Identities=23%  Similarity=0.295  Sum_probs=298.9

Q ss_pred             CHHHHHHHcCChhhHHHHHh-hccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccC-CCCCCcHHHHHHHcCCH
Q psy8109         588 SPLHLACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHK-TKDGSTALFFACYDKRL  665 (1011)
Q Consensus       588 t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~  665 (1011)
                      |+|..||..|+.|++++|+. +.++..+|..|.+||.+|+..||..+|+.|+. ..++++.. |..+.|+|.+||..|+.
T Consensus       759 t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk-~ha~veaQsdrtkdt~lSlacsggr~  837 (2131)
T KOG4369|consen  759 TNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLK-AHADVEAQSDRTKDTMLSLACSGGRT  837 (2131)
T ss_pred             ccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHh-hhhhhhhhcccccCceEEEecCCCcc
Confidence            78999999999999999998 69999999999999999999999999999999 78888764 67889999999999999


Q ss_pred             HHHHHHHHCCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhc
Q psy8109         666 DLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEEC  744 (1011)
Q Consensus       666 ~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~  744 (1011)
                      ++|++||.+|++-..++- .+|||..+.. .|..+++..|+..|++++.+.....|.+||+.|..+|+ ...++.|++. 
T Consensus       838 ~vvelLl~~gankehrnvsDytPlsla~S-ggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh-~~at~~ll~~-  914 (2131)
T KOG4369|consen  838 RVVELLLNAGANKEHRNVSDYTPLSLARS-GGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGH-QAATLSLLQP-  914 (2131)
T ss_pred             hHHHHHHHhhccccccchhhcCchhhhcC-cchHHHHHHHhhcccccccccccccCcchhhhhhhccc-cHHHHHHhcc-
Confidence            999999999998877776 8999999988 99999999999999999999988889999999999999 8999999998 


Q ss_pred             CCCccccc-CCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCcccc-ccCCC
Q psy8109         745 NADITLRN-FNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLR-TIKHG  822 (1011)
Q Consensus       745 g~~~~~~~-~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~g  822 (1011)
                      |.++|..- .+.+|+|-+|+..|+.++|.+||.+.+++..+-..|.|||+-++..|.+++-.+|+..|+|+|.. .....
T Consensus       915 gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~  994 (2131)
T KOG4369|consen  915 GSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTW  994 (2131)
T ss_pred             cchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcC
Confidence            88998754 46789999999999999999999999999999999999999999999999999999999999973 23455


Q ss_pred             ChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHH
Q psy8109         823 STALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVA  902 (1011)
Q Consensus       823 ~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~  902 (1011)
                      -|+|.+++..||...|+.|+...+.+..+++.|+|+|.+|+..|++..+.+|+++++|++..|+...++++.|.+.||+.
T Consensus       995 dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~ 1074 (2131)
T KOG4369|consen  995 DTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFA 1074 (2131)
T ss_pred             CccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchhh
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCc
Q psy8109         903 KLRAANIYVDK  913 (1011)
Q Consensus       903 ~~~~~~~~~~~  913 (1011)
                      +|...-.+...
T Consensus      1075 iVk~mv~~atq 1085 (2131)
T KOG4369|consen 1075 IVKKMVPPATQ 1085 (2131)
T ss_pred             eeccccCchhc
Confidence            99876555443

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.8e-34  Score=300.92  Aligned_cols=235  Identities=21%  Similarity=0.275  Sum_probs=151.8

Q ss_pred             cCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhC
Q psy8109         628 HGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKY  707 (1011)
Q Consensus       628 ~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~  707 (1011)
                      .++.+++++|++ .|+  +..|..|.||||+|+..|+.+++++|+++|++++..+ +.||||.|+. .|+.+++++|+++
T Consensus         9 ~~~~~~~~~Lis-~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d-~~TpLh~Aa~-~g~~eiV~lLL~~   83 (284)
T PHA02791          9 WKSKQLKSFLSS-KDA--FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE-NEFPLHQAAT-LEDTKIVKILLFS   83 (284)
T ss_pred             cCHHHHHHHHHh-CCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC-CCCHHHHHHH-CCCHHHHHHHHHC
Confidence            467788888888 666  4577888888888888888888888888888776543 3566666665 5566666666666


Q ss_pred             CCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCc-cHHHHHHhCCCHHHHHHHHHCCCCCCCCC-
Q psy8109         708 GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNR-TALNFAAFGNNLDLLKFLLKAGADPDILD-  785 (1011)
Q Consensus       708 g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~-t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d-  785 (1011)
                      |++++..+..  |.||||+|+..|+ .+++++|++. |++++..+..|+ ||||+|+..|+.++|++|+++|.+.  .+ 
T Consensus        84 Gadvn~~d~~--G~TpLh~Aa~~g~-~eivk~Ll~~-gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~  157 (284)
T PHA02791         84 GMDDSQFDDK--GNTALYYAVDSGN-MQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDL  157 (284)
T ss_pred             CCCCCCCCCC--CCCHHHHHHHcCC-HHHHHHHHHC-CCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--ccc
Confidence            6666555554  6666666666666 6666666666 666666665553 5666666666666666666665432  12 


Q ss_pred             cCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChH-HHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHH
Q psy8109         786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTA-LHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQ  864 (1011)
Q Consensus       786 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~-L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~  864 (1011)
                      ..|.||||+|+..|+.++|++|+++|++++. .+..|.|| ||+|+.+|+.++|++|+++|+++|.+|..| |+|     
T Consensus       158 ~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~-~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l-----  230 (284)
T PHA02791        158 AILLSCIHITIKNGHVDMMILLLDYMTSTNT-NNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL-----  230 (284)
T ss_pred             ccCccHHHHHHHcCCHHHHHHHHHCCCCCCc-ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC-----
Confidence            1356666666666666666666666666665 44555544 666666666666666666666666666533 333     


Q ss_pred             cCCHHHHHHHHhcCCCc
Q psy8109         865 AKNWDIVTFLLDAGSNI  881 (1011)
Q Consensus       865 ~g~~~iv~~Ll~~ga~~  881 (1011)
                       ++.|++++||++-++.
T Consensus       231 -~~~e~~~~ll~~~~~~  246 (284)
T PHA02791        231 -DDAEIAKMIIEKHVEY  246 (284)
T ss_pred             -CCHHHHHHHHHhhhhh
Confidence             5666666666655443

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=3e-33  Score=313.95  Aligned_cols=429  Identities=14%  Similarity=0.133  Sum_probs=246.7

Q ss_pred             HHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcH-HHHHHHHHCCCCCccCCCCCCcHHHH-HHHcCChhHHHHHHhcCC
Q psy8109         307 IVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCL-EIVKILLDKGADINSGNDDGCTPLFC-AIAQNCLEVFNYLVNHGC  384 (1011)
Q Consensus       307 iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~-~iv~~Ll~~ga~~n~~~~~g~t~L~~-A~~~g~~~iv~~Ll~~g~  384 (1011)
                      -.+.|++.|+++-.   ...+.||||.=..+.|. .-++.++.-|..++..+.+|.+++++ |..+|++|+|++|+++|+
T Consensus        20 ~~~~l~~~g~~~~~---~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GA   96 (631)
T PHA02792         20 SAQSLIESGANPLY---EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGL   96 (631)
T ss_pred             HHHHHHHcCCCccc---ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCC
Confidence            36788899985332   45677999877655553 34566667777788888888888875 556788899999999999


Q ss_pred             CCCCC-CCCCcHHHHHHh-cCCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChH
Q psy8109         385 DLSVP-EGERTALHMASQ-FGNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTA  461 (1011)
Q Consensus       385 ~~~~~-~~~~t~L~~Aa~-~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~  461 (1011)
                      +++.. ..+.+++++|+. .++.|++++|+++| ++...+..|.||++.                               
T Consensus        97 dvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~-------------------------------  145 (631)
T PHA02792         97 EINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIE-------------------------------  145 (631)
T ss_pred             CcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhh-------------------------------
Confidence            88876 444677777754 57777777777665 334444555555554                               


Q ss_pred             HHHHHHcCC-HHHHHHHHh---ccCCCCCCCCCCcHHHHHHHcC-------CHHHHHHHHhcCcccccccCCCCCHHHHH
Q psy8109         462 LHLACYFGN-LAMVNYLVK---HIDINSENDLGKTPIYFAIKNN-------HLEIFNLLLKLGADVAVKMKSNFTCLHVA  530 (1011)
Q Consensus       462 L~~Aa~~g~-~~iv~~Ll~---~~~~~~~~~~g~t~L~~A~~~g-------~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A  530 (1011)
                         .+.... .+.-..+-+   +..+|..+..|.||||+|+.++       +.++++.|+++|++++..+..|.||||+|
T Consensus       146 ---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~  222 (631)
T PHA02792        146 ---QITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYY  222 (631)
T ss_pred             ---hcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHH
Confidence               222110 000000000   2234667777888888888888       78888888888888888888888888888


Q ss_pred             HHhC--CHHHHHHHHhccCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhh
Q psy8109         531 CEFA--SIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKY  608 (1011)
Q Consensus       531 ~~~g--~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~  608 (1011)
                      +.+.  ..+++++|+..+...   ......|           ..+|-.+-.. .  +         ..-+..+|..|+++
T Consensus       223 ~~~~~i~~ei~~~L~~~~~~~---~~~~~~l-----------~~y~~~~~~~-~--~---------~~id~~iv~~ll~~  276 (631)
T PHA02792        223 VDKCDIKREIFDALFDSNYSG---NELMNIL-----------SNYLRKQYRN-K--N---------HKIDNYIVDKLLSG  276 (631)
T ss_pred             HHcccchHHHHHHHHhccccc---cchHhHH-----------HHHHHHHhcc-C--c---------cCccHHHHHHHHhC
Confidence            8888  778888887751111   0000111           1111110000 0  0         00012244444442


Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCcCCCCCCc
Q psy8109         609 FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK--RLDLVEILLEANADVNLGDGTYT  686 (1011)
Q Consensus       609 ~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~ga~~~~~~~~~t  686 (1011)
                      ...-       -.+.........+.+...+.+.. +      .-+..||.-...+  +.+++++|+++|++.. ......
T Consensus       277 ~~~~-------~i~~~~~~~~~~~~~~~~~~~~~-~------~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~-r~~~~n  341 (631)
T PHA02792        277 HDTF-------YILELCNSLRNNIIISSILKRYT-D------SIQDLLSEYVSYHTVYINVIKCMIDEGATLY-RFKHIN  341 (631)
T ss_pred             CCcc-------chhhhhhhhhhhhHHHHHHHHHh-H------HHHHHHHHHHhcCCccHHHHHHHHHCCCccc-cCCcch
Confidence            1100       00000000111111111111000 0      0011233333333  5677777777777654 222444


Q ss_pred             HHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCH--HHHHHHHHHhcCCCcccccCCCccHHHHHHh
Q psy8109         687 PLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDC--NDIARFLVEECNADITLRNFNNRTALNFAAF  764 (1011)
Q Consensus       687 ~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~--~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~  764 (1011)
                      .++.|+. .++.+++++|+++|++++..+....+.||||+|+.....  .+++++|+++ |+++|.+|..|.||||.|+.
T Consensus       342 ~~~~Aa~-~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~-GADIN~kD~~G~TPLh~Aa~  419 (631)
T PHA02792        342 KYFQKFD-NRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPY-IDDINKIDKHGRSILYYCIE  419 (631)
T ss_pred             HHHHHHH-cCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhc-CCccccccccCcchHHHHHH
Confidence            5565544 666777777777777766665543345777766555441  2345666666 77777777777777777777


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCcCCCCccccccc----------CChHHHHHHHHHcCCCcc
Q psy8109         765 GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCR----------QGLYEIVDTLLEYNADTN  815 (1011)
Q Consensus       765 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~----------~g~~~iv~~Ll~~g~~~~  815 (1011)
                      .++.+++++|+++|++++..+..|.|||+.|+.          ....++++.|+++|+++.
T Consensus       420 ~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        420 SHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE  480 (631)
T ss_pred             cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence            777777777777777777777777777777654          123455666777666553

>KOG4412|consensus

Probab=100.00  E-value=7.8e-35  Score=262.57  Aligned_cols=182  Identities=30%  Similarity=0.369  Sum_probs=172.5

Q ss_pred             CCCccCC-CCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHC-CCCCCCCCcC
Q psy8109         710 DVNLTNE-ACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKA-GADPDILDLK  787 (1011)
Q Consensus       710 ~~~~~~~-~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~-gad~~~~d~~  787 (1011)
                      +.+..+. +  |+|||||||..|+ .+++.||++..+..+|..|..||||||+|+..|+.++|+.|+.+ |+|+|..+..
T Consensus        29 SL~~r~dqD--~Rt~LHwa~S~g~-~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~  105 (226)
T KOG4412|consen   29 SLNARDDQD--GRTPLHWACSFGH-VEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNG  105 (226)
T ss_pred             hhhcccccc--CCceeeeeeecCc-hhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCC
Confidence            4444444 4  9999999999999 99999999888999999999999999999999999999999999 9999999999


Q ss_pred             CCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCC
Q psy8109         788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN  867 (1011)
Q Consensus       788 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~  867 (1011)
                      |.|+||+|+..|..+|+++|+++|+.++. .|..|.||||-||..|+++++++|+..|+.+|.+|+.|+||||.|.-.||
T Consensus       106 G~T~LHyAagK~r~eIaqlLle~ga~i~~-kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~  184 (226)
T KOG4412|consen  106 GQTCLHYAAGKGRLEIAQLLLEKGALIRI-KDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGH  184 (226)
T ss_pred             CcceehhhhcCChhhHHHHHHhcCCCCcc-cccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccC
Confidence            99999999999999999999999999998 99999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcccccccCCCHHhhHH
Q psy8109         868 WDIVTFLLDAGSNIEKATKYRMTFESSKV  896 (1011)
Q Consensus       868 ~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~  896 (1011)
                      .++..+|+.+||+++..|+.| ||+..|.
T Consensus       185 ~d~a~lLV~~gAd~~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  185 PDVAVLLVRAGADTDREDKEG-TALRIAC  212 (226)
T ss_pred             chHHHHHHHhccceeeccccC-chHHHHH
Confidence            999999999999999999988 9977654

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.1e-33  Score=295.24  Aligned_cols=151  Identities=25%  Similarity=0.293  Sum_probs=78.2

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR  336 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~  336 (1011)
                      .|.||||+|+..|+.++|++|++.|++++..+   |.||||+|+..|+.++|++|+++|+  +++.+|..|.||||+|+.
T Consensus        29 ~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d---~~TpLh~Aa~~g~~eiV~lLL~~Ga--dvn~~d~~G~TpLh~Aa~  103 (284)
T PHA02791         29 HGHSALYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLEDTKIVKILLFSGM--DDSQFDDKGNTALYYAVD  103 (284)
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC---CCCHHHHHHHCCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHH
Confidence            45555555555555555555555555544321   4555555555555555555555555  455555555555555555


Q ss_pred             cCcHHHHHHHHHCCCCCccCCCCCC-cHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHH
Q psy8109         337 RKCLEIVKILLDKGADINSGNDDGC-TPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLL  412 (1011)
Q Consensus       337 ~g~~~iv~~Ll~~ga~~n~~~~~g~-t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll  412 (1011)
                      .|+.+++++|+++|++++..+..|+ ||||+|+..|+.++|++|+++|.+......+.||||+|+..|+.+++++|+
T Consensus       104 ~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL  180 (284)
T PHA02791        104 SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLL  180 (284)
T ss_pred             cCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHH
Confidence            5555555555555555555555443 555555555555555555554432211112334444444444444444333

>PHA02795 ankyrin-like protein; Provisional

Probab=100.00  E-value=1e-32  Score=299.24  Aligned_cols=287  Identities=20%  Similarity=0.264  Sum_probs=217.7

Q ss_pred             CCCHHHHHHHHhCCCCCC------ccCCCCCCCcHHHHHHH--CCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCC
Q psy8109         695 DPSLDIIKMLVKYGADVN------LTNEACYYMTPLHYASY--RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGN  766 (1011)
Q Consensus       695 ~~~~~iv~~Ll~~g~~~~------~~~~~~~~~t~l~~A~~--~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g  766 (1011)
                      .+..+++++|+.+|++++      .....  ++|+||+++.  .|+ .+++++|+++ |++++..  ++.||||.|+..|
T Consensus        87 ~~~k~~~~~l~s~~~~~~~~~~~~~~~~~--~~~~L~~~~~n~~n~-~eiV~~LI~~-GADIn~~--~~~t~lh~A~~~~  160 (437)
T PHA02795         87 ITYKDIISALVSKNYMEDIFSIIIKNCNS--VQDLLLYYLSNAYVE-IDIVDFMVDH-GAVIYKI--ECLNAYFRGICKK  160 (437)
T ss_pred             cchHHHHHHHHhcccccchhhhhhhcccc--ccHHHHHHHHhcCCC-HHHHHHHHHC-CCCCCCC--CCCCHHHHHHHcC
Confidence            444555555555555544      22333  7889999988  777 8999999988 9999874  4588999999999


Q ss_pred             CHHHHHHHHHCCCCCCCC------CcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHH
Q psy8109         767 NLDLLKFLLKAGADPDIL------DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKL  840 (1011)
Q Consensus       767 ~~~iv~~Ll~~gad~~~~------d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~  840 (1011)
                      +.+++++|+++|++....      +..+.+++|.|+..++.+++++|+++|+++|. .+..|.||||+|+..|+.++|++
T Consensus       161 ~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~-kD~~G~TpLh~Aa~~g~~eiVel  239 (437)
T PHA02795        161 ESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQ-LDAGGRTLLYRAIYAGYIDLVSW  239 (437)
T ss_pred             cHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCc-CCCCCCCHHHHHHHcCCHHHHHH
Confidence            999999999999843322      13477899999999999999999999999998 88999999999999999999999


Q ss_pred             HHhccCCcccccCCCCCHHHHHHHcC--------CHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhhcc-
Q psy8109         841 LLKYNADINAEDKYGKIAFHSACQAK--------NWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYV-  911 (1011)
Q Consensus       841 Ll~~ga~in~~d~~g~taL~~A~~~g--------~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~-  911 (1011)
                      |+++|+++|.+|..|+||||+|+..|        |.+++++|+++|++++.....+..   .  ...+.++++.+-.|+ 
T Consensus       240 LL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~~~~~---~--~~~n~~~ik~lI~y~~  314 (437)
T PHA02795        240 LLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKLAILN---N--TIENHDVIKLCIKYFM  314 (437)
T ss_pred             HHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhHHhhh---c--ccchHHHHHHHHHHHH
Confidence            99999999999999999999999988        469999999999999875433211   1  011344444432221 


Q ss_pred             --CcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCcchhhhHh-hcC-----chhHHHhhhchhhhhcccccccccc
Q psy8109         912 --DKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEKVSFYDIL-SKH-----PAQVEFYAKNPQISNCVKWKDLNLQ  983 (1011)
Q Consensus       912 --~~~~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~~~~~~i~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  983 (1011)
                        +....... .....++...|.+|+..|+..++++   .|+||++ .++     .+.+.+|.+||.+.++..     .+
T Consensus       315 ~ldy~~~~~~-~s~~~~~i~~CekEI~~Mk~~kI~n---~SvydiIFn~n~~~~~~~~L~Ryvnn~~i~~~~~-----~~  385 (437)
T PHA02795        315 MVDYSLCNVY-ASSLFDYIIDCKQELEYIRQMKIHN---TTMYELIYNRDKNKHASHILHRYSKHPVLTQCIT-----KG  385 (437)
T ss_pred             hcccchhhhh-hhhhHHHHHHHHHHHHHHHHHhcCC---ccHHHhhccCCccccchHHHHHHhcCcHHHHHHH-----hc
Confidence              11111111 2345578889999999999999985   6899985 322     245789999999999543     46


Q ss_pred             ccccccccchhHHHHHHHhh
Q psy8109         984 FPIYGDVICCKFTKVLNSLK 1003 (1011)
Q Consensus       984 ~~~~~~~~~~~~~~~~~~~~ 1003 (1011)
                      ||||++.+ ..+.+..+|-+
T Consensus       386 f~iY~~~i-k~I~~a~~R~~  404 (437)
T PHA02795        386 FKIYTEVT-EQVTKALNRRA  404 (437)
T ss_pred             chHHHHHH-HHHHHHHHHHH
Confidence            99999996 55777777644

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=5.2e-32  Score=310.06  Aligned_cols=253  Identities=24%  Similarity=0.264  Sum_probs=221.4

Q ss_pred             CCHHHHHHHcCChhhHHHHHh-hccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCH
Q psy8109         587 DSPLHLACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRL  665 (1011)
Q Consensus       587 ~t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~  665 (1011)
                      +++|+.|+..|+.+++++|++ +++++..+..|.||||.|+..|+.+++++|++ .|++++..+..+.||||.|+..|+.
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~t~L~~A~~~g~~   81 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMK-HGAIPDVKYPDIESELHDAVEEGDV   81 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCccccCCCcccHHHHHHHCCCH
Confidence            478999999999999999999 88999999999999999999999999999999 8999999989999999999999999


Q ss_pred             HHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcC
Q psy8109         666 DLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN  745 (1011)
Q Consensus       666 ~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g  745 (1011)
                      +++++|++.|+..+..                                .+..  |.||||+|+..|+ .+++++|++. |
T Consensus        82 ~~v~~Ll~~~~~~~~~--------------------------------~~~~--g~tpL~~A~~~~~-~~iv~~Ll~~-g  125 (413)
T PHA02875         82 KAVEELLDLGKFADDV--------------------------------FYKD--GMTPLHLATILKK-LDIMKLLIAR-G  125 (413)
T ss_pred             HHHHHHHHcCCccccc--------------------------------ccCC--CCCHHHHHHHhCC-HHHHHHHHhC-C
Confidence            9999999988755321                                1112  7889999999998 8999999988 9


Q ss_pred             CCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChH
Q psy8109         746 ADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTA  825 (1011)
Q Consensus       746 ~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~  825 (1011)
                      ++++..+..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++......+.||
T Consensus       126 ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~  205 (413)
T PHA02875        126 ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAA  205 (413)
T ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998444445689


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCcccc---cCCCCCHHHHHHHc---CCHHHHHHHHh
Q psy8109         826 LHTAAFHNQLDIIKLLLKYNADINAE---DKYGKIAFHSACQA---KNWDIVTFLLD  876 (1011)
Q Consensus       826 L~~Aa~~g~~~iv~~Ll~~ga~in~~---d~~g~taL~~A~~~---g~~~iv~~Ll~  876 (1011)
                      +|+|+..|+.++|++|+++|+++|..   +..|.|||+.++..   ...+.++.|+.
T Consensus       206 l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li~  262 (413)
T PHA02875        206 LCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNMCTNLESEAIDALIA  262 (413)
T ss_pred             HHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHHH
Confidence            99999999999999999999999865   67788999987643   34556665553

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.6e-31  Score=311.10  Aligned_cols=277  Identities=25%  Similarity=0.391  Sum_probs=200.5

Q ss_pred             CHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHH--cCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHh-
Q psy8109         226 KTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAIL--NSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIV-  302 (1011)
Q Consensus       226 ~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~--~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~-  302 (1011)
                      ..+.|+.|+..|. ++...            .+.|+++.+..  .++.++|++|+++|++++..+.. |.||||.|+.+ 
T Consensus        17 ~~~~v~~ll~~~~-~~~~~------------~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~-g~TpL~~~~~n~   82 (489)
T PHA02798         17 KLSTVKLLIKSCN-PNEIV------------NEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNE-YSTPLCTILSNI   82 (489)
T ss_pred             cHHHHHHHHhcCC-hhhhc------------ccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCC-CCChHHHHHHhH
Confidence            4789999997653 33221            34566664443  45899999999999999987766 99999998864 


Q ss_pred             ----CCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcC---cHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC---
Q psy8109         303 ----ESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRK---CLEIVKILLDKGADINSGNDDGCTPLFCAIAQNC---  372 (1011)
Q Consensus       303 ----g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g---~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~---  372 (1011)
                          ++.+++++|+++|+  ++|.++..|.||||+|+.+|   +.+++++|+++|++++..+..|.||||+|+..|+   
T Consensus        83 ~~~~~~~~iv~~Ll~~Ga--diN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~  160 (489)
T PHA02798         83 KDYKHMLDIVKILIENGA--DINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHID  160 (489)
T ss_pred             HhHHhHHHHHHHHHHCCC--CCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcch
Confidence                67899999999999  79999999999999999876   7899999999999999999999999999999988   


Q ss_pred             hhHHHHHHhcCCCCCCC--CCCCcHHHHHHhc----CCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcCCCHHHHHHHH
Q psy8109         373 LEVFNYLVNHGCDLSVP--EGERTALHMASQF----GNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQASLEVFHSII  445 (1011)
Q Consensus       373 ~~iv~~Ll~~g~~~~~~--~~~~t~L~~Aa~~----g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll  445 (1011)
                      .+++++|+++|++++..  ..+.||||.++..    ++.+++++|+++| .++..+..+.++++....            
T Consensus       161 ~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~------------  228 (489)
T PHA02798        161 IEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLN------------  228 (489)
T ss_pred             HHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHH------------
Confidence            89999999999998865  3567888877653    3566666666555 444444444444331000            


Q ss_pred             HcCCCcccccCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCC
Q psy8109         446 EAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFT  525 (1011)
Q Consensus       446 ~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t  525 (1011)
                                     .+..+...++.+++.+|+.++++|.++..|.||||+|+..|+.+++++|++.|++++..+..|.|
T Consensus       229 ---------------~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~T  293 (489)
T PHA02798        229 ---------------SLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNT  293 (489)
T ss_pred             ---------------HHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCc
Confidence                           01123344556666666666666666666666777666666666777776666666666666666


Q ss_pred             HHHHHHHhCCHHHHHHHHhc
Q psy8109         526 CLHVACEFASIEMVSFLLSH  545 (1011)
Q Consensus       526 ~L~~A~~~g~~~iv~~Ll~~  545 (1011)
                      ||+.|+..|+.++++.|+++
T Consensus       294 pL~~A~~~~~~~iv~~lL~~  313 (489)
T PHA02798        294 CLFTAFENESKFIFNSILNK  313 (489)
T ss_pred             HHHHHHHcCcHHHHHHHHcc
Confidence            66666666666666666654

>KOG4412|consensus

Probab=99.98  E-value=4.9e-32  Score=244.54  Aligned_cols=209  Identities=27%  Similarity=0.381  Sum_probs=177.9

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhhCCCCcccCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCC
Q psy8109         619 ETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTK-DGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPS  697 (1011)
Q Consensus       619 ~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~-~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~  697 (1011)
                      .++.+.++......-++.+++...-.++.++. +|+||||.||..|+.+++.+|+. .                      
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLls-q----------------------   60 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLS-Q----------------------   60 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHh-c----------------------
Confidence            45666666666666677776644435666655 78888888888777777777774 1                      


Q ss_pred             HHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHC
Q psy8109         698 LDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKA  777 (1011)
Q Consensus       698 ~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~  777 (1011)
                               .+..++..+..  |+||||+|+..|+ .++|+-|+.+.|+++|..+..|.|+||+|+..|+.+|+++|+++
T Consensus        61 ---------~nv~~ddkDda--GWtPlhia~s~g~-~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~  128 (226)
T KOG4412|consen   61 ---------PNVKPDDKDDA--GWTPLHIAASNGN-DEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEK  128 (226)
T ss_pred             ---------CCCCCCCcccc--CCchhhhhhhcCc-HHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhc
Confidence                     12233334444  9999999999999 99999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCC
Q psy8109         778 GADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKI  857 (1011)
Q Consensus       778 gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~t  857 (1011)
                      |+.+++.|..|.||||.|+.-|.++++++|+..|+.+|. +|..|+||||.|...|+.++..+|+++||+++..|+.| |
T Consensus       129 ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~-qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t  206 (226)
T KOG4412|consen  129 GALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNT-QDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-T  206 (226)
T ss_pred             CCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCc-ccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-c
Confidence            999999999999999999999999999999999999998 99999999999999999999999999999999999988 9


Q ss_pred             HHHHHHH
Q psy8109         858 AFHSACQ  864 (1011)
Q Consensus       858 aL~~A~~  864 (1011)
                      |+..|+.
T Consensus       207 ~~~~a~~  213 (226)
T KOG4412|consen  207 ALRIACN  213 (226)
T ss_pred             hHHHHHH
Confidence            9887764

>KOG0509|consensus

Probab=99.96  E-value=5.9e-29  Score=269.72  Aligned_cols=207  Identities=32%  Similarity=0.423  Sum_probs=104.1

Q ss_pred             HHHHHHHcCCHHHHHHHHHC-CCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCC
Q psy8109         655 ALFFACYDKRLDLVEILLEA-NADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD  732 (1011)
Q Consensus       655 ~L~~A~~~g~~~iv~~Ll~~-ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~  732 (1011)
                      -+..|++.|.++-++.|++. |.+++..+. +.++||.||. +++++++++|+++|+++|..... .+.||||+|+++|+
T Consensus        47 ~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAi-NNrl~v~r~li~~gadvn~~gG~-l~stPLHWAar~G~  124 (600)
T KOG0509|consen   47 DIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAI-NNRLDVARYLISHGADVNAIGGV-LGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHH-cCcHHHHHHHHHcCCCccccCCC-CCCCcchHHHHcCc
Confidence            34455555555555555555 555554444 4455555555 45555555555555555544421 24455555555555


Q ss_pred             HHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCC
Q psy8109         733 CNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNA  812 (1011)
Q Consensus       733 ~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~  812 (1011)
                       ..+|.+|+++ |++++.+|..|.+|||.|++.|++-+|-+||.+|+|+|.+|..|+||||+|+.+|+...+..|++.|+
T Consensus       125 -~~vv~lLlqh-GAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a  202 (600)
T KOG0509|consen  125 -ISVVDLLLQH-GADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGA  202 (600)
T ss_pred             -HHHHHHHHHc-CCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcc
Confidence             4555555554 55555555555555555555555555555555555555555555555555555554444555555555


Q ss_pred             CccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHc
Q psy8109         813 DTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQA  865 (1011)
Q Consensus       813 ~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~  865 (1011)
                      .++...+..|.||||+|+..|+..++.+|++.|++.+.+|.+|.||+.+|.+.
T Consensus       203 ~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  203 SLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            55443334455555555555555555533344444444454455555555443

>KOG0509|consensus

Probab=99.96  E-value=1.4e-28  Score=266.88  Aligned_cols=208  Identities=33%  Similarity=0.422  Sum_probs=195.6

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC--CCcHHHHHHHcCC
Q psy8109         619 ETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG--TYTPLYTALMKDP  696 (1011)
Q Consensus       619 ~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~--~~t~L~~aa~~~~  696 (1011)
                      ...+..|+..|.++.|+.|++..|.+++..|.+|.|+||.|+.+++++++++|+++|+++|...+  +.||||+|+. +|
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar-~G  123 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAAR-NG  123 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHH-cC
Confidence            45678899999999999999955999999999999999999999999999999999999999886  8999999999 99


Q ss_pred             CHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109         697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK  776 (1011)
Q Consensus       697 ~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  776 (1011)
                      +..++++|+++|++++.++..  |.+|+|.|+..|+ ..++-||+.. +++++.+|.+|+||||.|+..|+...+..||.
T Consensus       124 ~~~vv~lLlqhGAdpt~~D~~--G~~~lHla~~~~~-~~~vayll~~-~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~  199 (600)
T KOG0509|consen  124 HISVVDLLLQHGADPTLKDKQ--GLTPLHLAAQFGH-TALVAYLLSK-GADIDLRDNNGRTPLMWAAYKGFALFVRRLLK  199 (600)
T ss_pred             cHHHHHHHHHcCCCCceecCC--CCcHHHHHHHhCc-hHHHHHHHHh-cccCCCcCCCCCCHHHHHHHhcccHHHHHHHH
Confidence            999999999999999999998  9999999999999 8899999999 89999999999999999999999998999999


Q ss_pred             CCCCCCCCC-cCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHc
Q psy8109         777 AGADPDILD-LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFH  832 (1011)
Q Consensus       777 ~gad~~~~d-~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~  832 (1011)
                      -|+.++..| ..|.||||+|+..|+..++.+|++-|++.+. .+.+|.||+.+|...
T Consensus       200 f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~-~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  200 FGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDK-TNTNGKTPFDLAQER  255 (600)
T ss_pred             hcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccc-cccCCCCHHHHHHHh
Confidence            999999988 8999999999999999999977777788776 778899999999877

>KOG4369|consensus

Probab=99.96  E-value=2.1e-29  Score=281.20  Aligned_cols=323  Identities=27%  Similarity=0.300  Sum_probs=297.3

Q ss_pred             CCCCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q psy8109         209 LSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIE  288 (1011)
Q Consensus       209 ~~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~  288 (1011)
                      ....+-.|+|-.||..||.++|..|+.+|+++...+.           .|.+||.+|+-.||..+|+.|+.+.++++...
T Consensus       752 ~Te~n~~t~LT~acaggh~e~vellv~rganiehrdk-----------kgf~plImaatagh~tvV~~llk~ha~veaQs  820 (2131)
T KOG4369|consen  752 LTEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDK-----------KGFVPLIMAATAGHITVVQDLLKAHADVEAQS  820 (2131)
T ss_pred             ccCccccccccccccCccHHHHHHHHHhccccccccc-----------ccchhhhhhcccCchHHHHHHHhhhhhhhhhc
Confidence            3445667999999999999999999999999988887           89999999999999999999999999999998


Q ss_pred             cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCC--CCCCcHHHH
Q psy8109         289 KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGN--DDGCTPLFC  366 (1011)
Q Consensus       289 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~--~~g~t~L~~  366 (1011)
                      +..+.|+|.+||..|+.++|++||.+|+  +-..++...+|||.+|...|..++|..|+.+|+.+|.+.  ..|.+||++
T Consensus       821 drtkdt~lSlacsggr~~vvelLl~~ga--nkehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLml  898 (2131)
T KOG4369|consen  821 DRTKDTMLSLACSGGRTRVVELLLNAGA--NKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLML  898 (2131)
T ss_pred             ccccCceEEEecCCCcchHHHHHHHhhc--cccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhh
Confidence            8889999999999999999999999999  555677788999999999999999999999999998775  578999999


Q ss_pred             HHHcCChhHHHHHHhcCCCCCCC--CCCCcHHHHHHhcCCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcCCCHHHHHH
Q psy8109         367 AIAQNCLEVFNYLVNHGCDLSVP--EGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQASLEVFHS  443 (1011)
Q Consensus       367 A~~~g~~~iv~~Ll~~g~~~~~~--~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~i~~~  443 (1011)
                      |..+||.+.+..|++.|.++|..  .+..|+|-+|+-.|+.++|.+||... .+..+-+.|.|||+.++.+ +.+++-.+
T Consensus       899 atmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~Asg-Gyvdvg~~  977 (2131)
T KOG4369|consen  899 ATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASG-GYVDVGNL  977 (2131)
T ss_pred             hhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcC-Cccccchh
Confidence            99999999999999999999977  56689999999999999999999886 8888899999999997665 48999999


Q ss_pred             HHHcCCCccccc--CCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCccccccc
Q psy8109         444 IIEAGADIKAKL--MDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKM  520 (1011)
Q Consensus       444 Ll~~g~~~~~~~--~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~  520 (1011)
                      |+..|+|.+...  ....|+|.+++..||...|+.|+. .+.+...+..|.|+|..|+..|++..+..|++++++++..+
T Consensus       978 li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qd 1057 (2131)
T KOG4369|consen  978 LIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQD 1057 (2131)
T ss_pred             hhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhh
Confidence            999999987643  345789999999999999999998 57788899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHhCCHHHHHHHHhc
Q psy8109         521 KSNFTCLHVACEFASIEMVSFLLSH  545 (1011)
Q Consensus       521 ~~~~t~L~~A~~~g~~~iv~~Ll~~  545 (1011)
                      ....++++.|.+.||.+||+|+...
T Consensus      1058 nr~~S~~maafRKgh~~iVk~mv~~ 1082 (2131)
T KOG4369|consen 1058 NRTNSRTMAAFRKGHFAIVKKMVPP 1082 (2131)
T ss_pred             cccccccHHHHHhchhheeccccCc
Confidence            9999999999999999999999865

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.94  E-value=1.9e-26  Score=234.73  Aligned_cols=174  Identities=20%  Similarity=0.213  Sum_probs=158.6

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCC--CHHHHHHHHHCCCCCCCCC-cCCCCcccccc
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGN--NLDLLKFLLKAGADPDILD-LKDTSPLLSSC  796 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g--~~~iv~~Ll~~gad~~~~d-~~g~t~L~~A~  796 (1011)
                      +.|||+.|+..|+ .++|++|++.    ++..+..|.||||+|+..+  +.+++++|+++|++++..+ ..|.||||+|+
T Consensus        21 ~~~pL~~A~~~~~-~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~   95 (209)
T PHA02859         21 YCNPLFYYVEKDD-IEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYL   95 (209)
T ss_pred             cCcHHHHHHHhCc-HHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHH
Confidence            6899999999999 9999999875    4567889999999999854  8999999999999999997 48999999987


Q ss_pred             c---CChHHHHHHHHHcCCCccccccCCCChHHHHHHH--cCCHHHHHHHHhccCCcccccCCCCCHHHH-HHHcCCHHH
Q psy8109         797 R---QGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAF--HNQLDIIKLLLKYNADINAEDKYGKIAFHS-ACQAKNWDI  870 (1011)
Q Consensus       797 ~---~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~--~g~~~iv~~Ll~~ga~in~~d~~g~taL~~-A~~~g~~~i  870 (1011)
                      .   .++.+++++|+++|++++. .+..|.||||.|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.++
T Consensus        96 ~~~~~~~~eiv~~Ll~~gadin~-~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i  174 (209)
T PHA02859         96 SFNKNVEPEILKILIDSGSSITE-EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI  174 (209)
T ss_pred             HhCccccHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence            5   3579999999999999998 88899999999986  468999999999999999999999999995 567889999


Q ss_pred             HHHHHhcCCCcccccccCCCHHhhHHhhC
Q psy8109         871 VTFLLDAGSNIEKATKYRMTFESSKVVEK  899 (1011)
Q Consensus       871 v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  899 (1011)
                      +++|+++|++++.+|..|+||+++|..++
T Consensus       175 v~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        175 FDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            99999999999999999999999998754

>PHA02795 ankyrin-like protein; Provisional

Probab=99.94  E-value=6.3e-26  Score=246.48  Aligned_cols=197  Identities=18%  Similarity=0.134  Sum_probs=175.5

Q ss_pred             HHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcc------cccCCCccHHHHHHh--CCCHHHH
Q psy8109         700 IIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADIT------LRNFNNRTALNFAAF--GNNLDLL  771 (1011)
Q Consensus       700 iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~------~~~~~g~t~L~~Aa~--~g~~~iv  771 (1011)
                      +.++++.+|++++....+  +     +|+..+. .+++++|+.+ |++++      ..+..++|+||+|+.  .|+.++|
T Consensus        64 ~~~~~~~~~~~i~~~~~~--~-----~~~~~~~-k~~~~~l~s~-~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV  134 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVD--R-----LFAYITY-KDIISALVSK-NYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIV  134 (437)
T ss_pred             HHHHHHHcCcchhhhhhh--h-----HHhhcch-HHHHHHHHhc-ccccchhhhhhhccccccHHHHHHHHhcCCCHHHH
Confidence            457888899988866655  3     7777777 9999999999 99988      678889999999999  8999999


Q ss_pred             HHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccc-----cCCCChHHHHHHHcCCHHHHHHHHhccC
Q psy8109         772 KFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRT-----IKHGSTALHTAAFHNQLDIIKLLLKYNA  846 (1011)
Q Consensus       772 ~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-----~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga  846 (1011)
                      ++|+++||+++..+  +.||||.|+..++.++|++|+++|++.....     +..+.|++|.|+..++.+++++|+++|+
T Consensus       135 ~~LI~~GADIn~~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GA  212 (437)
T PHA02795        135 DFMVDHGAVIYKIE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIE  212 (437)
T ss_pred             HHHHHCCCCCCCCC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcC
Confidence            99999999999854  5899999999999999999999998543212     1347899999999999999999999999


Q ss_pred             CcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCC--------HHHHHHh
Q psy8109         847 DINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKH--------VAKLRAA  907 (1011)
Q Consensus       847 ~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~--------~~~~~~~  907 (1011)
                      ++|.+|..|+||||+|+..|+.++|++|+++||+++..|..|+||||+|+..|+        .++++.+
T Consensus       213 DIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelL  281 (437)
T PHA02795        213 DINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEIL  281 (437)
T ss_pred             CcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999984        5777765

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.93  E-value=2.3e-25  Score=233.59  Aligned_cols=247  Identities=21%  Similarity=0.231  Sum_probs=137.2

Q ss_pred             HHHHHHCCCHHHHHHHHHHhcCCCccccc----CCCccHHHHHHhCCCHHHHHHHHHCCCCCCCC-CcCCCCcccccccC
Q psy8109         724 LHYASYRGDCNDIARFLVEECNADITLRN----FNNRTALNFAAFGNNLDLLKFLLKAGADPDIL-DLKDTSPLLSSCRQ  798 (1011)
Q Consensus       724 l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~----~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~-d~~g~t~L~~A~~~  798 (1011)
                      |+.|+..|+ .+++++|+++ |++++.++    ..|.||||+|+..|+.+++++|+++||+++.. +..|.||||.|+..
T Consensus        37 L~~A~~~~~-~eivk~LL~~-GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~  114 (300)
T PHA02884         37 LYSSIKFHY-TDIIDAILKL-GADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLH  114 (300)
T ss_pred             HHHHHHcCC-HHHHHHHHHC-CCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHc
Confidence            333344444 5555555555 55555442    34555555555555555555555555555543 23455555555555


Q ss_pred             ChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109         799 GLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG  878 (1011)
Q Consensus       799 g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g  878 (1011)
                      |+.+++++|+++|++++. .+..|.||||.|+..++.+++..+.  |..   .+..+.+|++++   ++.+++++|++++
T Consensus       115 ~~~eivklLL~~GAdin~-kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~ei~~~Lish~  185 (300)
T PHA02884        115 GCLKCLEILLSYGADINI-QTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL---INFDILKILVSHF  185 (300)
T ss_pred             CCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh---ccHHHHHHHHHHH
Confidence            555555555555555554 4445555555555555555443332  111   233344455443   2455555555554


Q ss_pred             CCcccccccCCCHHhhHHhhCCHHHHHHhhhccCcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCC--CcchhhhHh-
Q psy8109         879 SNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQ--EKVSFYDIL-  955 (1011)
Q Consensus       879 a~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~--~~~~~~~i~-  955 (1011)
                      +- ...+ +   ++   ... + ..-.  ...+..+.........+.++..+|..||.+|+.++.++.  +.+||+|++ 
T Consensus       186 vl-~~~~-~---~~---~~~-~-~~~~--~~Gf~~N~~lI~~~~~l~~~k~~C~~Ei~~Mk~~~i~~~~~~~~s~~d~~~  253 (300)
T PHA02884        186 IL-QASN-D---RL---NEK-H-NKNF--NAGYNKNKHLIIQSIILKQFKDLCIDDIDIMKNIKLGDDSNDMLSFFDILV  253 (300)
T ss_pred             HH-Hhhh-h---hh---hhh-c-cccc--hHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHheeeCCCCCccccHHHHHH
Confidence            31 1000 0   00   000 0 0000  001122222333346788999999999999999999975  258999996 


Q ss_pred             hcCchhHHHhhhchhhhhccccccccccccccccccchhHHHHH
Q psy8109         956 SKHPAQVEFYAKNPQISNCVKWKDLNLQFPIYGDVICCKFTKVL  999 (1011)
Q Consensus       956 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  999 (1011)
                      .++.+.+-+|.+||.+..+      ...|++|+..|.-++.+..
T Consensus       254 ~~d~~~l~~~~~~~~i~~~------~~~~~iY~~~i~~~i~~~~  291 (300)
T PHA02884        254 ENDLIKLLNNIDNIDILDI------PKKLKVYNNKIKLFLDEAI  291 (300)
T ss_pred             hCCHHHHHHHhcChhhhhh------hhceeHHHHHHHHHHHHHH
Confidence            6688899999999998873      3459999999988877543

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.93  E-value=7.6e-25  Score=222.97  Aligned_cols=177  Identities=20%  Similarity=0.320  Sum_probs=153.7

Q ss_pred             CCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCcccc
Q psy8109         211 HSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNS--DIELVKLLLEKGANPLAIE  288 (1011)
Q Consensus       211 ~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~~~  288 (1011)
                      .+.++|||++|+..|+.++|+.|++.+   +..+.           .|.||||.|+..+  +.++|++|+++|++++..+
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~~---n~~~~-----------~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~   83 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKFV---NDCND-----------LYETPIFSCLEKDKVNVEILKFLIENGADVNFKT   83 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHhh---hccCc-----------cCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC
Confidence            356789999999999999999999753   33333           7889999999854  8999999999999999887


Q ss_pred             cCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh--cCcHHHHHHHHHCCCCCccCCCCCCcH
Q psy8109         289 KSRNRTALHVAAIV---ESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR--RKCLEIVKILLDKGADINSGNDDGCTP  363 (1011)
Q Consensus       289 ~~~g~t~L~~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~--~g~~~iv~~Ll~~ga~~n~~~~~g~t~  363 (1011)
                      ...|.||||+|+..   ++.+++++|+++|+  +++..|..|.||||+|+.  .++.+++++|+++|++++..|..|.||
T Consensus        84 ~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~ga--din~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~  161 (209)
T PHA02859         84 RDNNLSALHHYLSFNKNVEPEILKILIDSGS--SITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNI  161 (209)
T ss_pred             CCCCCCHHHHHHHhCccccHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcH
Confidence            55599999998764   47999999999999  789999999999999886  468999999999999999999999999


Q ss_pred             HHH-HHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcC
Q psy8109         364 LFC-AIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFG  403 (1011)
Q Consensus       364 L~~-A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g  403 (1011)
                      ||. |+..|+.+++++|+++|++++.. ..|.|||++|+..+
T Consensus       162 Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        162 LYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            995 56788999999999999999877 77889999988654

>KOG0502|consensus

Probab=99.92  E-value=1.6e-25  Score=208.66  Aligned_cols=234  Identities=26%  Similarity=0.255  Sum_probs=112.9

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCC
Q psy8109         617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDP  696 (1011)
Q Consensus       617 ~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~  696 (1011)
                      .|...+..+...|+.+++..+.....-.+...+..|+++++.++-.++.+.+..++.+|+..|..+.             
T Consensus        61 lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~-------------  127 (296)
T KOG0502|consen   61 LGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSL-------------  127 (296)
T ss_pred             cCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCcccc-------------
Confidence            3444455555555555555544422223334444555555555555555555555555444443332             


Q ss_pred             CHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109         697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK  776 (1011)
Q Consensus       697 ~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  776 (1011)
                                          .  +.+|+.+++...+ .+++..+.++   -+|..|..|.|||..|+..|++++|++||+
T Consensus       128 --------------------~--p~s~~slsVhql~-L~~~~~~~~n---~VN~~De~GfTpLiWAaa~G~i~vV~fLL~  181 (296)
T KOG0502|consen  128 --------------------M--PWSPLSLSVHQLH-LDVVDLLVNN---KVNACDEFGFTPLIWAAAKGHIPVVQFLLN  181 (296)
T ss_pred             --------------------c--cCChhhHHHHHHH-HHHHHHHhhc---cccCccccCchHhHHHHhcCchHHHHHHHH
Confidence                                1  3444444444333 3333333222   344445555555555555555555555555


Q ss_pred             CCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC
Q psy8109         777 AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK  856 (1011)
Q Consensus       777 ~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~  856 (1011)
                      .|||+++......++|++|++.|..+||++|+++++++|. .|.+|-|||.+|++.|+.++|+.|++.||+++..|..|.
T Consensus       182 ~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv-yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy  260 (296)
T KOG0502|consen  182 SGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNV-YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGY  260 (296)
T ss_pred             cCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce-eccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCC
Confidence            5555554444444555555555555555555555555554 444555555555555555555555555555555555555


Q ss_pred             CHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCH
Q psy8109         857 IAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTF  891 (1011)
Q Consensus       857 taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~  891 (1011)
                      +++..|+..|+. +|+..+++-+....+|....||
T Consensus       261 ~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~  294 (296)
T KOG0502|consen  261 WIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTP  294 (296)
T ss_pred             cHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCC
Confidence            555555555544 4444444444444444333333

>KOG0502|consensus

Probab=99.92  E-value=6e-25  Score=204.79  Aligned_cols=233  Identities=24%  Similarity=0.303  Sum_probs=204.6

Q ss_pred             CCCHHHHHHHcCChhhHHHHHh--hccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcC
Q psy8109         586 NDSPLHLACATGNMDMITYAMK--YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK  663 (1011)
Q Consensus       586 ~~t~l~~A~~~g~~~iv~~Ll~--~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g  663 (1011)
                      +...+..+...|+.+++.....  ...+...+..|..+++.++-.|+...+..++. .+...|..+.-+++|+..++...
T Consensus        62 ge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttlt-N~~rgnevs~~p~s~~slsVhql  140 (296)
T KOG0502|consen   62 GESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLT-NGARGNEVSLMPWSPLSLSVHQL  140 (296)
T ss_pred             CCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeec-ccccCCccccccCChhhHHHHHH
Confidence            3455677888899888877776  23345567779999999999999999999998 89999999999999999999887


Q ss_pred             CHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHh
Q psy8109         664 RLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEE  743 (1011)
Q Consensus       664 ~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~  743 (1011)
                      +++.+..+.++                                   .+|..++.  |.|||+||+..|+ ..+|+||++.
T Consensus       141 ~L~~~~~~~~n-----------------------------------~VN~~De~--GfTpLiWAaa~G~-i~vV~fLL~~  182 (296)
T KOG0502|consen  141 HLDVVDLLVNN-----------------------------------KVNACDEF--GFTPLIWAAAKGH-IPVVQFLLNS  182 (296)
T ss_pred             HHHHHHHHhhc-----------------------------------cccCcccc--CchHhHHHHhcCc-hHHHHHHHHc
Confidence            77777666543                                   22333443  9999999999999 9999999999


Q ss_pred             cCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCC
Q psy8109         744 CNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGS  823 (1011)
Q Consensus       744 ~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~  823 (1011)
                       |++++..-....++|.+|+..|..+||++||..+.|+|..|.+|-|||.+|++.+|.++|+.|++.|++++. .+..|+
T Consensus       183 -GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~-e~dsGy  260 (296)
T KOG0502|consen  183 -GADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQ-EDDSGY  260 (296)
T ss_pred             -CCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCccc-ccccCC
Confidence             999999999999999999999999999999999999999999999999999999999999999999999997 888999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHH
Q psy8109         824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFH  860 (1011)
Q Consensus       824 t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~  860 (1011)
                      +++..|+..|+. +|+..++.-+..+.+|..-+||+|
T Consensus       261 ~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  261 WIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             cHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCCC
Confidence            999999999987 999999988888888888888875

>KOG0507|consensus

Probab=99.90  E-value=1.4e-23  Score=229.97  Aligned_cols=257  Identities=29%  Similarity=0.392  Sum_probs=214.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCC------------CcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCC
Q psy8109         260 TPLHSAILNSDIELVKLLLEKGAN------------PLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAG  327 (1011)
Q Consensus       260 t~L~~A~~~g~~~iv~~Ll~~g~~------------~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g  327 (1011)
                      +-|..|+..|+.+.|..||+....            -....+..|.|+||.|+.+|+.+++++|+++.+  -++..+..|
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea--~ldl~d~kg   82 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEA--LLDLCDTKG   82 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchh--hhhhhhccC
Confidence            457889999999999999985211            112223359999999999999999999999988  688889999


Q ss_pred             CCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHH
Q psy8109         328 LTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLE  406 (1011)
Q Consensus       328 ~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~  406 (1011)
                      .+|||+|+.+|+.++|+.|+.++..+|..+..|.||||.|+++||.++|.+|+++|+++-+. ..+.|+|..|++.|..+
T Consensus        83 ~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~  162 (854)
T KOG0507|consen   83 ILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAE  162 (854)
T ss_pred             cceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhH
Confidence            99999999999999999999999999999999999999999999999999999999999887 77789999999999999


Q ss_pred             HHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCC
Q psy8109         407 MVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINS  485 (1011)
Q Consensus       407 iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~  485 (1011)
                      +|+.|++.. ..                     + .++.-.|  ...++..+.+|||.|+++||.++++.|++ +.++|.
T Consensus       163 Vvq~ll~~~-~~---------------------~-~~~~~~~--~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~  217 (854)
T KOG0507|consen  163 VVQMLLQKK-FP---------------------V-QSSLRVG--DIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINY  217 (854)
T ss_pred             HHHHHhhhc-cc---------------------h-hhcccCC--CCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCccc
Confidence            999999751 10                     0 0112223  23455667889999999999999999998 888888


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhC---CHHHHHHHHh
Q psy8109         486 ENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFA---SIEMVSFLLS  544 (1011)
Q Consensus       486 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g---~~~iv~~Ll~  544 (1011)
                      ....| |+||.|+..|..++|.+|++.|.+.+.++..|.|+|.+-...-   ..+++-++..
T Consensus       218 ~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~  278 (854)
T KOG0507|consen  218 TTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKN  278 (854)
T ss_pred             ccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhhhhhhhc
Confidence            87755 8999999999999999999999999999999999988765433   3444444443

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.90  E-value=7.1e-23  Score=251.73  Aligned_cols=195  Identities=22%  Similarity=0.287  Sum_probs=174.9

Q ss_pred             CHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109         697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK  776 (1011)
Q Consensus       697 ~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  776 (1011)
                      ..++-.++.+.+....  +.  .+.++|+.||..|+ .++++.|++. |+++|..|..|+||||+|+..|+.+++++|++
T Consensus       506 ~l~v~~ll~~~~~~~~--~~--~~~~~L~~Aa~~g~-~~~l~~Ll~~-G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~  579 (823)
T PLN03192        506 DLNVGDLLGDNGGEHD--DP--NMASNLLTVASTGN-AALLEELLKA-KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLK  579 (823)
T ss_pred             cccHHHHHhhcccccC--Cc--cchhHHHHHHHcCC-HHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHh
Confidence            4455566666655321  11  26789999999999 9999999988 99999999999999999999999999999999


Q ss_pred             CCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC
Q psy8109         777 AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK  856 (1011)
Q Consensus       777 ~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~  856 (1011)
                      +|++++.+|..|.||||.|+..|+.+++++|++.++..+.   ..+.++||.|+..|+.+++++|+++|+++|.+|..|+
T Consensus       580 ~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~---~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~  656 (823)
T PLN03192        580 HACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP---HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGA  656 (823)
T ss_pred             cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc---ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999998876654   5677999999999999999999999999999999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHhcCCCcccccccC-CCHHhhHHhhCC
Q psy8109         857 IAFHSACQAKNWDIVTFLLDAGSNIEKATKYR-MTFESSKVVEKH  900 (1011)
Q Consensus       857 taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g-~t~l~~a~~~~~  900 (1011)
                      ||||+|+..|+.++|++|+++||+++..|..| .||+.++.....
T Consensus       657 TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~~  701 (823)
T PLN03192        657 TALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQK  701 (823)
T ss_pred             CHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999988 999988765443

>KOG0507|consensus

Probab=99.89  E-value=4.5e-23  Score=225.99  Aligned_cols=239  Identities=27%  Similarity=0.344  Sum_probs=154.5

Q ss_pred             cHHHHHHHcCCHHHHHHHHhhCC------------CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcH
Q psy8109         620 TPLHVAVSHGCLEAVKFLLNTKN------------IDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTP  687 (1011)
Q Consensus       620 t~L~~A~~~g~~~iv~~Ll~~~g------------~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~  687 (1011)
                      +-+..|+..|+.+.+..|++..+            ...|..|.+|.|+||.|+.+|+.+++++|+++.+-++..+.    
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~----   80 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDT----   80 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhc----
Confidence            34677899999999999987432            23456677788888888888888888888776554443332    


Q ss_pred             HHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC
Q psy8109         688 LYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN  767 (1011)
Q Consensus       688 L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~  767 (1011)
                                                   .  |.+|||+|+.+|+ .++++.|+.. +..+|.....|.||||.|++.|+
T Consensus        81 -----------------------------k--g~~plhlaaw~g~-~e~vkmll~q-~d~~na~~~e~~tplhlaaqhgh  127 (854)
T KOG0507|consen   81 -----------------------------K--GILPLHLAAWNGN-LEIVKMLLLQ-TDILNAVNIENETPLHLAAQHGH  127 (854)
T ss_pred             -----------------------------c--CcceEEehhhcCc-chHHHHHHhc-ccCCCcccccCcCccchhhhhcc
Confidence                                         1  5556666666666 5666666555 45555556666666666666666


Q ss_pred             HHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCc-------cccccCCCChHHHHHHHcCCHHHHHH
Q psy8109         768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADT-------NLRTIKHGSTALHTAAFHNQLDIIKL  840 (1011)
Q Consensus       768 ~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-------~~~~~~~g~t~L~~Aa~~g~~~iv~~  840 (1011)
                      .++|.+|+.+|+|+-+++..+.|+|..|++.|..++|+.|+.....+       ....+-.+.+|||.|+.+|+.++++.
T Consensus       128 ~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~  207 (854)
T KOG0507|consen  128 LEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQA  207 (854)
T ss_pred             hHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHH
Confidence            66666666666666666666666666666666666666665542111       11133445567777777777777777


Q ss_pred             HHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHH
Q psy8109         841 LLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKV  896 (1011)
Q Consensus       841 Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~  896 (1011)
                      |+++|.++|.....| |+||.|+.+|..++|.+|++.|.+..+.+.+|+|+|.+-.
T Consensus       208 ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~  262 (854)
T KOG0507|consen  208 LLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIII  262 (854)
T ss_pred             HHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHH
Confidence            777777777666555 6777777777777777777777777777777777766543

>KOG0514|consensus

Probab=99.88  E-value=5.9e-23  Score=206.11  Aligned_cols=159  Identities=28%  Similarity=0.372  Sum_probs=146.8

Q ss_pred             cccccCCCccHHHHHHhCCCHHHHHHHHHCC-CCCCCCCcCCCCccccccc-----CChHHHHHHHHHcCCCccccccCC
Q psy8109         748 ITLRNFNNRTALNFAAFGNNLDLLKFLLKAG-ADPDILDLKDTSPLLSSCR-----QGLYEIVDTLLEYNADTNLRTIKH  821 (1011)
Q Consensus       748 ~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~L~~A~~-----~g~~~iv~~Ll~~g~~~~~~~~~~  821 (1011)
                      +|.-|.+|.|+||||+..+++++|+.||+.| ++++.++.-|+||+|+|+.     ..+.++|..|...| ++|......
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~  339 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH  339 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence            4667899999999999999999999999998 6999999999999999875     35888999998876 677767789


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHh-cCCCcccccccCCCHHhhHHhhCC
Q psy8109         822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD-AGSNIEKATKYRMTFESSKVVEKH  900 (1011)
Q Consensus       822 g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~t~l~~a~~~~~  900 (1011)
                      |.|+||+|+.+|+.++|+.||..|||+|.+|.+|.|||+.|+.+||.+||++||. .+.|+...|.+|-|+|.+|...||
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh  419 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH  419 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence            9999999999999999999999999999999999999999999999999999996 689999999999999999999999


Q ss_pred             HHHHHHh
Q psy8109         901 VAKLRAA  907 (1011)
Q Consensus       901 ~~~~~~~  907 (1011)
                      .++.-.+
T Consensus       420 ~eIa~ml  426 (452)
T KOG0514|consen  420 REIAVML  426 (452)
T ss_pred             hHHHHHH
Confidence            9987544

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.87  E-value=7.5e-22  Score=241.92  Aligned_cols=238  Identities=23%  Similarity=0.231  Sum_probs=164.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhhC--CCCcccCCCCCCcHHH-HHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHH
Q psy8109         617 IGETPLHVAVSHGCLEAVKFLLNTK--NIDVNHKTKDGSTALF-FACYDKRLDLVEILLEANADVNLGDGTYTPLYTALM  693 (1011)
Q Consensus       617 ~g~t~L~~A~~~g~~~iv~~Ll~~~--g~~~~~~~~~g~t~L~-~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~  693 (1011)
                      .+...++.|+..|+.+.++.+++ .  +.++|..|..|.|||| .|+.+++.+++++|++.|+   ....+.||||.|+.
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~-~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~---~~~~G~T~Lh~A~~   91 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLE-EPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC---RGAVGDTLLHAISL   91 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhc-cccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC---CCCcChHHHHHHHh
Confidence            45677888888888888888887 5  6777777888888888 7777778888888887765   11124555555543


Q ss_pred             cCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhc---------CCCcccccCCCccHHHHHHh
Q psy8109         694 KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEEC---------NADITLRNFNNRTALNFAAF  764 (1011)
Q Consensus       694 ~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~---------g~~~~~~~~~g~t~L~~Aa~  764 (1011)
                        +..+.++.+                                +.++....         ..........|.||||+|+.
T Consensus        92 --~~~~~v~~l--------------------------------l~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~  137 (743)
T TIGR00870        92 --EYVDAVEAI--------------------------------LLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAH  137 (743)
T ss_pred             --ccHHHHHHH--------------------------------HHHHhhcccccCchhhhccccccccCCCCcHHHHHHH
Confidence              122222222                                22222110         00111223468888888888


Q ss_pred             CCCHHHHHHHHHCCCCCCCCC--------------cCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHH
Q psy8109         765 GNNLDLLKFLLKAGADPDILD--------------LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAA  830 (1011)
Q Consensus       765 ~g~~~iv~~Ll~~gad~~~~d--------------~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa  830 (1011)
                      .|+.++|++|+++|++++.++              ..|.||||.|+..|+.+++++|+++|++++. .+..|+||||+|+
T Consensus       138 ~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~-~d~~g~T~Lh~A~  216 (743)
T TIGR00870       138 RQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT-ADSLGNTLLHLLV  216 (743)
T ss_pred             hCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh-HhhhhhHHHHHHH
Confidence            888888888888888888653              2478899999999999999999999988887 7788899999998


Q ss_pred             HcC---------CHHHHHHHHhccCCc-------ccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHh
Q psy8109         831 FHN---------QLDIIKLLLKYNADI-------NAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFES  893 (1011)
Q Consensus       831 ~~g---------~~~iv~~Ll~~ga~i-------n~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~  893 (1011)
                      ..+         ...+.+++++.++..       +..|..|.||||+|+..|+.+++++|++.+++......+...+.+
T Consensus       217 ~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~~  295 (743)
T TIGR00870       217 MENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQL  295 (743)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchHh
Confidence            876         234556666665544       556888999999999999999999999865443333333333333

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.87  E-value=3.8e-21  Score=235.77  Aligned_cols=246  Identities=20%  Similarity=0.213  Sum_probs=169.4

Q ss_pred             CCcchHHHHHHHcCCHHHHHHHHHC--CCCCCcccCCCCCccccCCCCCChHHH-HHHHcCCHHHHHHHHHcCCCCcccc
Q psy8109         212 SQGYKALCWALQEKKTDIAKLLVDK--GVPLNLVDKGVPLNYSRRIIETDTPLH-SAILNSDIELVKLLLEKGANPLAIE  288 (1011)
Q Consensus       212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~--g~~~~~~~~~~~~~~~~~~~~~~t~L~-~A~~~g~~~iv~~Ll~~g~~~~~~~  288 (1011)
                      ..+...|+.||+.|+.+.|+.+++.  +.++|..+.           .|.|||| .|+.+++.+++++|++.|+     .
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~-----------~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~   78 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDR-----------LGRSALFVAAIENENLELTELLLNLSC-----R   78 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCc-----------cchhHHHHHHHhcChHHHHHHHHhCCC-----C
Confidence            4667999999999999999999998  888887776           8999999 9999999999999999987     2


Q ss_pred             cCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCC----C----cccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCC
Q psy8109         289 KSRNRTALHVAAIV---ESVDIVKLLFDYGAEKS----V----NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGN  357 (1011)
Q Consensus       289 ~~~g~t~L~~Aa~~---g~~~iv~~Ll~~~~~~~----~----~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~  357 (1011)
                      +..|.||||.|+..   +...++.++...+....    +    ......|.||||+||.+|+.++|++|+++|++++..+
T Consensus        79 ~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~  158 (743)
T TIGR00870        79 GAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARA  158 (743)
T ss_pred             CCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCc
Confidence            23399999999973   22344455554442100    1    1123469999999999999999999999999998653


Q ss_pred             C--------------CCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhccCccCCCC
Q psy8109         358 D--------------DGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHININHQDK  422 (1011)
Q Consensus       358 ~--------------~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~  422 (1011)
                      .              .|.|||+.|+..|+.+++++|+++|++++.. ..|.||||+|+..+.......=           
T Consensus       159 ~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~-----------  227 (743)
T TIGR00870       159 CGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEE-----------  227 (743)
T ss_pred             CCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHH-----------
Confidence            2              3667777777777777777777777666655 4556777766665521100000           


Q ss_pred             CCCcHhHHHHhcCCCHHHHHHHHHcCCC---c----ccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHH
Q psy8109         423 DGWTPLTCSIKGQASLEVFHSIIEAGAD---I----KAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPI  494 (1011)
Q Consensus       423 ~~~t~l~~a~~~~~~~~i~~~Ll~~g~~---~----~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L  494 (1011)
                                   ....+.+++++.++.   .    +..+.+|.||||.|+..|+.+++++|++ +............+.
T Consensus       228 -------------l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~  294 (743)
T TIGR00870       228 -------------LSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQ  294 (743)
T ss_pred             -------------HHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchH
Confidence                         011223333333332   2    4457788999999999999999999988 333222333344454


Q ss_pred             HHH
Q psy8109         495 YFA  497 (1011)
Q Consensus       495 ~~A  497 (1011)
                      +.+
T Consensus       295 ~~~  297 (743)
T TIGR00870       295 LLS  297 (743)
T ss_pred             hHh
Confidence            443

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.86  E-value=4.3e-21  Score=236.00  Aligned_cols=173  Identities=21%  Similarity=0.284  Sum_probs=134.9

Q ss_pred             CCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q psy8109         212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR  291 (1011)
Q Consensus       212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~  291 (1011)
                      ..+.++|+.||..|+.++++.|++.|+++|..+.           .|.||||.|+..|+.++|++|+++|++++..+.. 
T Consensus       523 ~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~-----------~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~-  590 (823)
T PLN03192        523 PNMASNLLTVASTGNAALLEELLKAKLDPDIGDS-----------KGRTPLHIAASKGYEDCVLVLLKHACNVHIRDAN-  590 (823)
T ss_pred             ccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-----------CCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCC-
Confidence            3456788888888888888888888888877776           7888888888888888888888888888776665 


Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109         292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN  371 (1011)
Q Consensus       292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g  371 (1011)
                      |.||||.|+..||.+++++|++.++.  .  ....+.++||.||.+|+.+++++|+++|+++|..|..|.||||+|+..|
T Consensus       591 G~TpL~~A~~~g~~~iv~~L~~~~~~--~--~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g  666 (823)
T PLN03192        591 GNTALWNAISAKHHKIFRILYHFASI--S--DPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAED  666 (823)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHhcCcc--c--CcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence            88888888888888888888877662  2  2234667888888888888888888888888888888888888888888


Q ss_pred             ChhHHHHHHhcCCCCCCC-CCC-CcHHHHHH
Q psy8109         372 CLEVFNYLVNHGCDLSVP-EGE-RTALHMAS  400 (1011)
Q Consensus       372 ~~~iv~~Ll~~g~~~~~~-~~~-~t~L~~Aa  400 (1011)
                      +.+++++|+++|++++.. ..+ .+|...+.
T Consensus       667 ~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~  697 (823)
T PLN03192        667 HVDMVRLLIMNGADVDKANTDDDFSPTELRE  697 (823)
T ss_pred             cHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Confidence            888888888888888766 223 56665553

>KOG0505|consensus

Probab=99.85  E-value=5.5e-21  Score=203.27  Aligned_cols=207  Identities=24%  Similarity=0.324  Sum_probs=174.0

Q ss_pred             cHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhC
Q psy8109         686 TPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFG  765 (1011)
Q Consensus       686 t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~  765 (1011)
                      ...+..+...+..+-++.|+..|+.++..+.+  |.|++|-+|...+ .+||+||+++ |+++|..|..|+||||.|+..
T Consensus        41 sa~~l~A~~~~d~~ev~~ll~~ga~~~~~n~D--glTalhq~~id~~-~e~v~~l~e~-ga~Vn~~d~e~wtPlhaaasc  116 (527)
T KOG0505|consen   41 SAVFLEACSRGDLEEVRKLLNRGASPNLCNVD--GLTALHQACIDDN-LEMVKFLVEN-GANVNAQDNEGWTPLHAAASC  116 (527)
T ss_pred             hHHHHhccccccHHHHHHHhccCCCccccCCc--cchhHHHHHhccc-HHHHHHHHHh-cCCccccccccCCcchhhccc
Confidence            34444444577888888888888888777777  8899999998888 8999999998 999999999999999999999


Q ss_pred             CCHHHHHHHHHCCCCCCCCCcCCCCcccccccCCh--------------------------HHHHHHHHHcCCCcccccc
Q psy8109         766 NNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGL--------------------------YEIVDTLLEYNADTNLRTI  819 (1011)
Q Consensus       766 g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~--------------------------~~iv~~Ll~~g~~~~~~~~  819 (1011)
                      |++.++++|+.+|+++-..+..|..|+..+...-.                          ..=+...+..|...+.+..
T Consensus       117 g~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~  196 (527)
T KOG0505|consen  117 GYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHA  196 (527)
T ss_pred             ccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcccccccccc
Confidence            99999999999999888888888888776533211                          1112333347887777444


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHh
Q psy8109         820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVV  897 (1011)
Q Consensus       820 ~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~  897 (1011)
                      . |.|+||.|+.+|..++.++|+++|.+++.+|.+||||||.|+..|+.+++++|+++|++.+..+..|.||+.+|..
T Consensus       197 r-G~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  197 R-GATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             c-cchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence            4 9999999999999999999999999999999999999999999999999999999999999999999999999875

>KOG0505|consensus

Probab=99.85  E-value=3.4e-21  Score=204.85  Aligned_cols=229  Identities=31%  Similarity=0.391  Sum_probs=156.2

Q ss_pred             HHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHcCCCHHH
Q psy8109         622 LHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDI  700 (1011)
Q Consensus       622 L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~~~~i  700 (1011)
                      +..|+..|..+-+..|+. .|+.++..+.+|.|+||.+|...+.+||++|+++|++++..+. +|||+|.++. .|++.+
T Consensus        44 ~l~A~~~~d~~ev~~ll~-~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaas-cg~~~i  121 (527)
T KOG0505|consen   44 FLEACSRGDLEEVRKLLN-RGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAAS-CGYLNI  121 (527)
T ss_pred             HHhccccccHHHHHHHhc-cCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcc-cccHHH
Confidence            344555555555655555 5555555666666666666666666666666666666665555 5666665555 566666


Q ss_pred             HHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccc-cCCCccHHHHHHhCCCHHHHHHHHHCCC
Q psy8109         701 IKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLR-NFNNRTALNFAAFGNNLDLLKFLLKAGA  779 (1011)
Q Consensus       701 v~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~-~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga  779 (1011)
                      +++|+.+|+++...+..  |..|...+..... .++...-....|++++.- ....++-|+        + +...+..|.
T Consensus       122 ~~~li~~gA~~~avNsd--g~~P~dl~e~ea~-~~~l~~~~~r~gi~iea~R~~~e~~ml~--------D-~~q~l~~G~  189 (527)
T KOG0505|consen  122 VEYLIQHGANLLAVNSD--GNMPYDLAEDEAT-LDVLETEMARQGIDIEAARKAEEQTMLD--------D-ARQWLNAGA  189 (527)
T ss_pred             HHHHHHhhhhhhhccCC--CCCccccccCcch-hHHHHHHHHHhcccHHHHhhhhHHHHHH--------H-HHHHHhccc
Confidence            66666666665555555  6666666554444 455555444445543321 111112221        2 233445899


Q ss_pred             CCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHH
Q psy8109         780 DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAF  859 (1011)
Q Consensus       780 d~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL  859 (1011)
                      +.++.+..|-|+||.|+.+|..++.++|++.|.+++. .|.+||||||.||..|..+++++|+++|++++.....|.||+
T Consensus       190 ~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~-~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~  268 (527)
T KOG0505|consen  190 ELDARHARGATALHVAAANGYTEVAALLLQAGYSVNI-KDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPL  268 (527)
T ss_pred             cccccccccchHHHHHHhhhHHHHHHHHHHhccCccc-ccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCc
Confidence            9898888899999999999999999999999999997 889999999999999999999999999999999999999999


Q ss_pred             HHHHHc
Q psy8109         860 HSACQA  865 (1011)
Q Consensus       860 ~~A~~~  865 (1011)
                      .+|...
T Consensus       269 dv~dee  274 (527)
T KOG0505|consen  269 DVADEE  274 (527)
T ss_pred             cchhhh
Confidence            988753

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.84  E-value=1.1e-20  Score=184.90  Aligned_cols=145  Identities=15%  Similarity=0.177  Sum_probs=130.0

Q ss_pred             CCCcccccCCCccHHHHHHhCCCH----HHHHHHHHCCCCCCCCCcCCCCcccccccCChHH---HHHHHHHcCCCcccc
Q psy8109         745 NADITLRNFNNRTALNFAAFGNNL----DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYE---IVDTLLEYNADTNLR  817 (1011)
Q Consensus       745 g~~~~~~~~~g~t~L~~Aa~~g~~----~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~---iv~~Ll~~g~~~~~~  817 (1011)
                      +++++..+..+.++||.|+..|+.    +++++|++.|++++..|..|+||||+|+..|+.+   ++++|+++|++++. 
T Consensus        10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~-   88 (166)
T PHA02743         10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA-   88 (166)
T ss_pred             chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC-
Confidence            667777788889999999999998    6777888899999999999999999999988755   48999999999998 


Q ss_pred             cc-CCCChHHHHHHHcCCHHHHHHHHh-ccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCC
Q psy8109         818 TI-KHGSTALHTAAFHNQLDIIKLLLK-YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT  890 (1011)
Q Consensus       818 ~~-~~g~t~L~~Aa~~g~~~iv~~Ll~-~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t  890 (1011)
                      .+ ..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++.+++++|+++|++++.++..|..
T Consensus        89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~  163 (166)
T PHA02743         89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS  163 (166)
T ss_pred             CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence            54 589999999999999999999995 89999999999999999999999999999999999999988877643

>KOG0514|consensus

Probab=99.82  E-value=1.9e-20  Score=188.32  Aligned_cols=161  Identities=30%  Similarity=0.397  Sum_probs=145.7

Q ss_pred             CccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhC-----CCHHHHHHHHHCCCCCCCCC-
Q psy8109         712 NLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFG-----NNLDLLKFLLKAGADPDILD-  785 (1011)
Q Consensus       712 ~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~-----g~~~iv~~Ll~~gad~~~~d-  785 (1011)
                      |+.+.+  |.|+|||++..++ .+||+.|+...-++++.++.-|.||+++|+..     .+.++|..|..-| |+|++- 
T Consensus       262 NlaDsN--GNTALHYsVSHaN-F~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAs  337 (452)
T KOG0514|consen  262 NLADSN--GNTALHYAVSHAN-FDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKAS  337 (452)
T ss_pred             hhhcCC--CCeeeeeeecccc-hHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhh
Confidence            445555  9999999999999 99999999997889999999999999998854     5788999998876 677664 


Q ss_pred             cCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCcccccCCCCCHHHHHHH
Q psy8109         786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK-YNADINAEDKYGKIAFHSACQ  864 (1011)
Q Consensus       786 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~ga~in~~d~~g~taL~~A~~  864 (1011)
                      ..|.|+||+|+.+|..++|+.||..|+|+|. .|.+|.|+||+||.+||.|||++||. .+.|+..+|.+|.|||.+|..
T Consensus       338 Q~gQTALMLAVSHGr~d~vk~LLacgAdVNi-QDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAle  416 (452)
T KOG0514|consen  338 QHGQTALMLAVSHGRVDMVKALLACGADVNI-QDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALE  416 (452)
T ss_pred             hhcchhhhhhhhcCcHHHHHHHHHccCCCcc-ccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHh
Confidence            4699999999999999999999999999998 89999999999999999999999995 588999999999999999999


Q ss_pred             cCCHHHHHHHHhc
Q psy8109         865 AKNWDIVTFLLDA  877 (1011)
Q Consensus       865 ~g~~~iv~~Ll~~  877 (1011)
                      .||.+|.-+|..+
T Consensus       417 agh~eIa~mlYa~  429 (452)
T KOG0514|consen  417 AGHREIAVMLYAH  429 (452)
T ss_pred             cCchHHHHHHHHH
Confidence            9999999888754

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.80  E-value=3.1e-19  Score=174.66  Aligned_cols=146  Identities=14%  Similarity=0.155  Sum_probs=127.5

Q ss_pred             CCCCCCccCCCCCCCcHHHHHHHCCCHH---HHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHH---HHHHHHCCCC
Q psy8109         707 YGADVNLTNEACYYMTPLHYASYRGDCN---DIARFLVEECNADITLRNFNNRTALNFAAFGNNLDL---LKFLLKAGAD  780 (1011)
Q Consensus       707 ~g~~~~~~~~~~~~~t~l~~A~~~g~~~---~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~i---v~~Ll~~gad  780 (1011)
                      +|++++..+..  +.+++|.|+..|+..   +++++|.+. +..++..|..|+||||+|+..|+.++   +++|++.|++
T Consensus         9 ~~~~~~~~~~~--~~~~l~~a~~~g~~~~l~~~~~~l~~~-g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad   85 (166)
T PHA02743          9 NNLGAVEIDED--EQNTFLRICRTGNIYELMEVAPFISGD-GHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD   85 (166)
T ss_pred             cchHHhhhccC--CCcHHHHHHHcCCHHHHHHHHHHHhhc-chhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC
Confidence            34555555554  788999999999933   555667776 88899999999999999999988654   8999999999


Q ss_pred             CCCCC-cCCCCcccccccCChHHHHHHHHH-cCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC
Q psy8109         781 PDILD-LKDTSPLLSSCRQGLYEIVDTLLE-YNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK  856 (1011)
Q Consensus       781 ~~~~d-~~g~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~  856 (1011)
                      ++.++ ..|.||||+|+..|+.+++++|+. .|++++. .+..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus        86 in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~-~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743         86 INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGA-INYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            99998 589999999999999999999995 8999997 788999999999999999999999999999999987774

>PHA02741 hypothetical protein; Provisional

Probab=99.80  E-value=2.8e-19  Score=176.02  Aligned_cols=132  Identities=21%  Similarity=0.194  Sum_probs=116.3

Q ss_pred             ccccCCCccHHHHHHhCCCHHHHHHHHH------CCCCCCCCCcCCCCcccccccCCh----HHHHHHHHHcCCCccccc
Q psy8109         749 TLRNFNNRTALNFAAFGNNLDLLKFLLK------AGADPDILDLKDTSPLLSSCRQGL----YEIVDTLLEYNADTNLRT  818 (1011)
Q Consensus       749 ~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~------~gad~~~~d~~g~t~L~~A~~~g~----~~iv~~Ll~~g~~~~~~~  818 (1011)
                      +.++..|.||||.|+..|+.+++++|+.      .|++++..|..|.||||+|+..|+    .+++++|+++|++++. .
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~-~   93 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA-Q   93 (169)
T ss_pred             hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-C
Confidence            3467789999999999999999998854      368889999999999999999988    5889999999999987 4


Q ss_pred             c-CCCChHHHHHHHcCCHHHHHHHHh-ccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109         819 I-KHGSTALHTAAFHNQLDIIKLLLK-YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI  881 (1011)
Q Consensus       819 ~-~~g~t~L~~Aa~~g~~~iv~~Ll~-~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~  881 (1011)
                      + ..|.||||+|+..++.+++++|+. .|++++.+|..|+|||++|+..++.+++++|++.++..
T Consensus        94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            4 489999999999999999999997 59999999999999999999999999999999887653

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.79  E-value=6.3e-19  Score=171.26  Aligned_cols=132  Identities=16%  Similarity=0.220  Sum_probs=112.0

Q ss_pred             ccccCCCccHHHHHHhCCCHHHHHHHHHCCC--C-----CCCCCcCCCCcccccccCChH---HHHHHHHHcCCCccccc
Q psy8109         749 TLRNFNNRTALNFAAFGNNLDLLKFLLKAGA--D-----PDILDLKDTSPLLSSCRQGLY---EIVDTLLEYNADTNLRT  818 (1011)
Q Consensus       749 ~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga--d-----~~~~d~~g~t~L~~A~~~g~~---~iv~~Ll~~g~~~~~~~  818 (1011)
                      +..|..|.||||+|+..|+.  +.++...+.  +     ++..|..|.||||+|+..|+.   +++++|+++|++++...
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~   88 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE   88 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence            44677899999999999984  344333322  2     224578999999999999976   56899999999999833


Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHh-ccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy8109         819 IKHGSTALHTAAFHNQLDIIKLLLK-YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE  882 (1011)
Q Consensus       819 ~~~g~t~L~~Aa~~g~~~iv~~Ll~-~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~  882 (1011)
                      +..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            3589999999999999999999997 599999999999999999999999999999999999875

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.78  E-value=1.9e-18  Score=181.47  Aligned_cols=151  Identities=20%  Similarity=0.194  Sum_probs=83.6

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcH
Q psy8109         216 KALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTA  295 (1011)
Q Consensus       216 t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~  295 (1011)
                      ++|+.|+..|+.+++++|+++|++++..+.       .....|.||||.|+..|+.+++++|+++|++++..++..|.||
T Consensus        35 ~lL~~A~~~~~~eivk~LL~~GAdiN~~~~-------~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~Tp  107 (300)
T PHA02884         35 NILYSSIKFHYTDIIDAILKLGADPEAPFP-------LSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITP  107 (300)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCccccCc-------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCH
Confidence            344555555666666666666666655321       0001456666666666666666666666666655433335666


Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhH
Q psy8109         296 LHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV  375 (1011)
Q Consensus       296 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~i  375 (1011)
                      ||.|+..|+.+++++|+.+|+  +++.++..|.||||+|+..++.+++..+...+     .+..+.+|+.++   ++.++
T Consensus       108 Lh~Aa~~~~~eivklLL~~GA--din~kd~~G~TpL~~A~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~n~ei  177 (300)
T PHA02884        108 LYISVLHGCLKCLEILLSYGA--DINIQTNDMVTPIELALMICNNFLAFMICDNE-----ISNFYKHPKKIL---INFDI  177 (300)
T ss_pred             HHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHhCChhHHHHhcCCc-----ccccccChhhhh---ccHHH
Confidence            666666666666666666666  55556666666666666666655554443211     233344455543   34555


Q ss_pred             HHHHHhcC
Q psy8109         376 FNYLVNHG  383 (1011)
Q Consensus       376 v~~Ll~~g  383 (1011)
                      +++|++++
T Consensus       178 ~~~Lish~  185 (300)
T PHA02884        178 LKILVSHF  185 (300)
T ss_pred             HHHHHHHH
Confidence            55555554

>KOG0512|consensus

Probab=99.78  E-value=9.3e-19  Score=157.56  Aligned_cols=140  Identities=27%  Similarity=0.269  Sum_probs=91.1

Q ss_pred             HHHHHhCCCHHHHHHHHHCCCC-CCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHH
Q psy8109         759 LNFAAFGNNLDLLKFLLKAGAD-PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDI  837 (1011)
Q Consensus       759 L~~Aa~~g~~~iv~~Ll~~gad-~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~i  837 (1011)
                      +..|+..+.+..|+.||+..++ +|.+|.+|.||||.|+.+||.+||+.|+..|++++. ....||||||-||..++.++
T Consensus        67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a-~T~~GWTPLhSAckWnN~~v  145 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEA-KTNEGWTPLHSACKWNNFEV  145 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccc-ccccCccchhhhhcccchhH
Confidence            4456666666666666665543 566666666666666666666666666666666666 45567777777777777777


Q ss_pred             HHHHHhccCCcccccCCCCCHHHHHHHcCC-HHHHHHHH-hcCCCcccccccCCCHHhhHHhhC
Q psy8109         838 IKLLLKYNADINAEDKYGKIAFHSACQAKN-WDIVTFLL-DAGSNIEKATKYRMTFESSKVVEK  899 (1011)
Q Consensus       838 v~~Ll~~ga~in~~d~~g~taL~~A~~~g~-~~iv~~Ll-~~ga~~~~~~~~g~t~l~~a~~~~  899 (1011)
                      +-+|+++|+|+|+......||||+||.+.+ ...+.+|+ +.+.++...+..+.||+.+|.+-+
T Consensus       146 a~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  146 AGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             HHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            777777777777776666777777776544 33444444 456666666777777777766544

>KOG0512|consensus

Probab=99.76  E-value=4.5e-18  Score=153.21  Aligned_cols=142  Identities=27%  Similarity=0.327  Sum_probs=125.7

Q ss_pred             HHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHH
Q psy8109         723 PLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYE  802 (1011)
Q Consensus       723 ~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~  802 (1011)
                      .+.+|+..+. ...|+-|++...-.+|.+|.+|.||||.|+.+|+.+||+.|+..||+++++...|+||||.||.-.+.+
T Consensus        66 l~lwaae~nr-l~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   66 LLLWAAEKNR-LTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHhhcc-HHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence            4677888888 677777777757779999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCccccccCCCChHHHHHHHcCC-HHHHHHHH-hccCCcccccCCCCCHHHHHHHcC
Q psy8109         803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQ-LDIIKLLL-KYNADINAEDKYGKIAFHSACQAK  866 (1011)
Q Consensus       803 iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~-~~iv~~Ll-~~ga~in~~d~~g~taL~~A~~~g  866 (1011)
                      ++-+||++|+|+|. ......||||.||.+.+ ...+.+|+ ..+.++......+.||+.+|-+.+
T Consensus       145 va~~LLqhgaDVnA-~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  145 VAGRLLQHGADVNA-QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             HHHHHHhccCcccc-cccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            99999999999998 66678999999997654 56667766 567888888899999999998765

>PHA02741 hypothetical protein; Provisional

Probab=99.75  E-value=1.2e-17  Score=164.59  Aligned_cols=126  Identities=23%  Similarity=0.332  Sum_probs=95.1

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHH------cCCCCcccccCCCCcHHHHHHHhCC----HHHHHHHHHcCCCCCCcccCC-
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLE------KGANPLAIEKSRNRTALHVAAIVES----VDIVKLLFDYGAEKSVNVQNV-  325 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~------~g~~~~~~~~~~g~t~L~~Aa~~g~----~~iv~~Ll~~~~~~~~~~~~~-  325 (1011)
                      .|.||||.|+..|+.++|++|+.      .|++++..+.. |.||||+|+..|+    .+++++|+++|+  +++.++. 
T Consensus        20 ~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~-g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ga--din~~~~~   96 (169)
T PHA02741         20 EGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDA-GQMCIHIAAEKHEAQLAAEIIDHLIELGA--DINAQEML   96 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCC-CCcHHHHHHHcCChHHHHHHHHHHHHcCC--CCCCCCcC
Confidence            67788888888888888887753      24566655554 7888888888877    477788888777  6777664 


Q ss_pred             CCCCHHHHHHhcCcHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCC
Q psy8109         326 AGLTPLHIACRRKCLEIVKILLD-KGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD  385 (1011)
Q Consensus       326 ~g~t~L~~Aa~~g~~~iv~~Ll~-~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  385 (1011)
                      .|+||||+|+..|+.+++++|++ .|++++..+..|.|||++|+..|+.+++++|++.++.
T Consensus        97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         97 EGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            78888888888888888888886 4788877777888888888888888888888776543

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.71  E-value=3.1e-17  Score=159.37  Aligned_cols=128  Identities=27%  Similarity=0.361  Sum_probs=104.3

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCCcc------cccCCCCcHHHHHHHhCCHH---HHHHHHHcCCCCCCcccC-C
Q psy8109         256 IETDTPLHSAILNSDIELVKLLLEKGANPLA------IEKSRNRTALHVAAIVESVD---IVKLLFDYGAEKSVNVQN-V  325 (1011)
Q Consensus       256 ~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~------~~~~~g~t~L~~Aa~~g~~~---iv~~Ll~~~~~~~~~~~~-~  325 (1011)
                      ..|.||||+||..|+.  +.++...+...+.      ..+..|.||||+|+..|+.+   ++++|+++|+  +++.++ .
T Consensus        15 ~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~ga--din~~~~~   90 (154)
T PHA02736         15 IEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGA--DINGKERV   90 (154)
T ss_pred             CCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCC--CccccCCC
Confidence            4789999999999984  4444333221111      12334899999999999874   6889999998  788887 4


Q ss_pred             CCCCHHHHHHhcCcHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCC
Q psy8109         326 AGLTPLHIACRRKCLEIVKILLD-KGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLS  387 (1011)
Q Consensus       326 ~g~t~L~~Aa~~g~~~iv~~Ll~-~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~  387 (1011)
                      .|.||||+|+..|+.+++++|+. .|++++..+..|.|||++|+..|+.+++++|+++|++.+
T Consensus        91 ~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         91 FGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            89999999999999999999998 499999999999999999999999999999999998764

>KOG0195|consensus

Probab=99.70  E-value=1.6e-17  Score=161.49  Aligned_cols=117  Identities=28%  Similarity=0.412  Sum_probs=68.2

Q ss_pred             CCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCCh
Q psy8109         745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGST  824 (1011)
Q Consensus       745 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t  824 (1011)
                      .-|.|.-|..|.+|||.|+..|+..+|+.|+..|+.+|..+....||||+|+..||.++|+.|++..+|+|. .+..|.|
T Consensus        24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna-vnehgnt  102 (448)
T KOG0195|consen   24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA-VNEHGNT  102 (448)
T ss_pred             ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch-hhccCCC
Confidence            445555555555666666666666666666666665555555555555555555555555555555555555 4555555


Q ss_pred             HHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHH
Q psy8109         825 ALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA  862 (1011)
Q Consensus       825 ~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A  862 (1011)
                      |||+||..|.-.+.+-|+..|+-++..+++|.|||..|
T Consensus       103 plhyacfwgydqiaedli~~ga~v~icnk~g~tpldka  140 (448)
T KOG0195|consen  103 PLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA  140 (448)
T ss_pred             chhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence            55555555555555555555555555555555555554

>KOG3676|consensus

Probab=99.70  E-value=6.3e-17  Score=181.24  Aligned_cols=259  Identities=21%  Similarity=0.195  Sum_probs=179.5

Q ss_pred             CCCcHHHHHHHCC--CHHHHHHHHHHhcCCCccc----ccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcc
Q psy8109         719 YYMTPLHYASYRG--DCNDIARFLVEECNADITL----RNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPL  792 (1011)
Q Consensus       719 ~~~t~l~~A~~~g--~~~~iv~~Ll~~~g~~~~~----~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L  792 (1011)
                      .|.|.||.|..+.  ...++++.|++..+--+|.    ....|.||||+|+.+.+.++|++|+++|||++++.. |  ++
T Consensus       142 ~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~-G--~F  218 (782)
T KOG3676|consen  142 TGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARAC-G--AF  218 (782)
T ss_pred             hhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhh-c--cc
Confidence            3888888888732  2357788887765433332    245699999999999999999999999999987652 1  11


Q ss_pred             cccccCChHHHHHHHHHcCCCcccc-ccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHH
Q psy8109         793 LSSCRQGLYEIVDTLLEYNADTNLR-TIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV  871 (1011)
Q Consensus       793 ~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv  871 (1011)
                      +.+-......         ...|.. .-..|..||-+||..++.+++++|+++|||++++|..|+|.||..+..-..++.
T Consensus       219 F~~~dqk~~r---------k~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My  289 (782)
T KOG3676|consen  219 FCPDDQKASR---------KSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMY  289 (782)
T ss_pred             cCcccccccc---------cccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHH
Confidence            2211110000         001110 124688999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC--cccccccCCCHHhhHHhhCCHHHHHHh-hhccCcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCCCc
Q psy8109         872 TFLLDAGSN--IEKATKYRMTFESSKVVEKHVAKLRAA-NIYVDKNIMVQFLTTQVNDFYEECLREVALLKCEKPGDQEK  948 (1011)
Q Consensus       872 ~~Ll~~ga~--~~~~~~~g~t~l~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~c~~ei~~~~~~~~~~~~~  948 (1011)
                      .+++++|++  ...+|+.|-|||.+|++.|+.++++.. .........+........+.     .+|+.+.    +   .
T Consensus       290 ~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGpvtsslYpL-----~~iDT~~----n---~  357 (782)
T KOG3676|consen  290 DLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGPVTSSLYPL-----NSIDTIG----N---E  357 (782)
T ss_pred             HHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecccccccccc-----hhccccc----c---h
Confidence            999999999  889999999999999999999999874 33122222222222333331     2233222    2   2


Q ss_pred             chhhhH--hhcCchhHHHhhhchhhhhcccccccccc-----ccccccccchhHHHHHHH
Q psy8109         949 VSFYDI--LSKHPAQVEFYAKNPQISNCVKWKDLNLQ-----FPIYGDVICCKFTKVLNS 1001 (1011)
Q Consensus       949 ~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 1001 (1011)
                      -|++.|  +...+.+++....=-+=.-..||+.|.++     |.+|--++.|+...++-|
T Consensus       358 ~SvLeivvyg~~~eHl~Ll~~~i~~LL~~KW~~f~k~~f~~~~~~~~~y~i~ft~~~y~R  417 (782)
T KOG3676|consen  358 NSVLEIVVYGIKNEHLELLDGPIEELLEDKWKAFGKKQFFMSLLIYLLYMICFTLAFYYR  417 (782)
T ss_pred             hhhhhhhhcCCcHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            355554  45555666666652222334579977755     777777777777777655

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.66  E-value=1.8e-16  Score=138.15  Aligned_cols=89  Identities=45%  Similarity=0.645  Sum_probs=75.2

Q ss_pred             ccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHH
Q psy8109         792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV  871 (1011)
Q Consensus       792 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv  871 (1011)
                      ||+|++.|+.+++++|++.+.+++.     |.||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~   75 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL-----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV   75 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS-----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC-----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence            5778888888888888888777664     77899999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCccccc
Q psy8109         872 TFLLDAGSNIEKAT  885 (1011)
Q Consensus       872 ~~Ll~~ga~~~~~~  885 (1011)
                      ++|+++|++++.+|
T Consensus        76 ~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   76 KLLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHHTTT-TTSS-
T ss_pred             HHHHHcCCCCCCcC
Confidence            99999999988754

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0195|consensus

Probab=99.65  E-value=1e-16  Score=156.04  Aligned_cols=119  Identities=31%  Similarity=0.341  Sum_probs=86.3

Q ss_pred             CCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC
Q psy8109         777 AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK  856 (1011)
Q Consensus       777 ~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~  856 (1011)
                      ...|.|.-|..|.+|||+||+.|+..+|+.|+.+|+.+|. .+....||||+||.+||.++|+.|++..+|+|+.+..|.
T Consensus        23 tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~-tnmgddtplhlaaahghrdivqkll~~kadvnavnehgn  101 (448)
T KOG0195|consen   23 TEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNS-TNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGN  101 (448)
T ss_pred             cccccccccccCcchhhhhhhcccHHHHHHHHhccccccc-ccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCC
Confidence            3456666677777777777777777777777777777776 555556777777777777777777777777777777777


Q ss_pred             CHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHH
Q psy8109         857 IAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKV  896 (1011)
Q Consensus       857 taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~  896 (1011)
                      |||||||..|.-.|.+-|+..||-+++.+++|.||+.-|-
T Consensus       102 tplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen  102 TPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             CchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            7777777777777777777777777777777777776553

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.63  E-value=1.9e-15  Score=131.54  Aligned_cols=88  Identities=49%  Similarity=0.666  Sum_probs=57.3

Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHH
Q psy8109         262 LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLE  341 (1011)
Q Consensus       262 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~  341 (1011)
                      ||.||+.|+++++++|++.+.+++.     |.||||+|+..|+.+++++|+++|+  +++.++..|+||||+|+.+|+.+
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~   73 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL-----GNTALHYAAENGNLEIVKLLLENGA--DINSQDKNGNTALHYAAENGNLE   73 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS-----SSBHHHHHHHTTTHHHHHHHHHTTT--CTT-BSTTSSBHHHHHHHTTHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC-----CCCHHHHHHHcCCHHHHHHHHHhcc--cccccCCCCCCHHHHHHHcCCHH
Confidence            5666777777777777766655544     5566666666666666666666666  56666666666666666666666


Q ss_pred             HHHHHHHCCCCCccC
Q psy8109         342 IVKILLDKGADINSG  356 (1011)
Q Consensus       342 iv~~Ll~~ga~~n~~  356 (1011)
                      ++++|+++|++++.+
T Consensus        74 ~~~~Ll~~g~~~~~~   88 (89)
T PF12796_consen   74 IVKLLLEHGADVNIR   88 (89)
T ss_dssp             HHHHHHHTTT-TTSS
T ss_pred             HHHHHHHcCCCCCCc
Confidence            666666666666554

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.58  E-value=1.2e-14  Score=136.09  Aligned_cols=124  Identities=42%  Similarity=0.603  Sum_probs=99.8

Q ss_pred             ccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHH
Q psy8109         751 RNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAA  830 (1011)
Q Consensus       751 ~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa  830 (1011)
                      .+..|.||||.|+..|+.+++++|++.|++.+..+..|.+||+.|+..++.+++++|++.|+.++. .+..|.||+|.|+
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~-~~~~~~~~l~~a~   81 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA-RDKDGNTPLHLAA   81 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHH
Confidence            346688888888888888888888888887777777888888888888888888888888877665 5567778888888


Q ss_pred             HcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHH
Q psy8109         831 FHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL  875 (1011)
Q Consensus       831 ~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll  875 (1011)
                      ..++.+++++|++.|.+++..+..|.||+++|+..++.+++++|+
T Consensus        82 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          82 RNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            888888888888888777778888888888888888888887764

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214|consensus

Probab=99.57  E-value=5.1e-15  Score=118.79  Aligned_cols=104  Identities=26%  Similarity=0.315  Sum_probs=94.4

Q ss_pred             CcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHH
Q psy8109         790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWD  869 (1011)
Q Consensus       790 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~  869 (1011)
                      ..+.|++++|..+-|+-.+..|.++|.  .-.|++|||+||..|+++++++|+..||+|+.+|++|-|||.-|+-.||.+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~--~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNE--IYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD   81 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHH--HhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence            346789999999999999999988885  248999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCcccccccCCCHHhhH
Q psy8109         870 IVTFLLDAGSNIEKATKYRMTFESSK  895 (1011)
Q Consensus       870 iv~~Ll~~ga~~~~~~~~g~t~l~~a  895 (1011)
                      +|++|+.+|||-....-+|.+.+..+
T Consensus        82 cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   82 CVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHcCcccceeCCCchhHHhhc
Confidence            99999999999988888888776543

>KOG3676|consensus

Probab=99.56  E-value=1.6e-14  Score=162.08  Aligned_cols=183  Identities=29%  Similarity=0.368  Sum_probs=119.0

Q ss_pred             CCCcchHHHHHHHc---CCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccc
Q psy8109         211 HSQGYKALCWALQE---KKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAI  287 (1011)
Q Consensus       211 ~~~g~t~L~~Aa~~---G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~  287 (1011)
                      ...|.|.||.|.-+   ++.++++.|++.-..  ....    .+......|.||||+|+.+.+.++|++|++.|||++.+
T Consensus       140 Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~p~--lind----~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aR  213 (782)
T KOG3676|consen  140 GATGETLLHKALLNLSDGHNELARVLLEIFPK--LIND----IYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHAR  213 (782)
T ss_pred             cchhhhHHHHHHhcCchhHHHHHHHHHHHhHH--Hhhh----hhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhH
Confidence            57899999999874   667999999985332  1111    23334458999999999999999999999999998765


Q ss_pred             ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcc--cCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHH
Q psy8109         288 EKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNV--QNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLF  365 (1011)
Q Consensus       288 ~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~--~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~  365 (1011)
                      ...    ++..+-..+...           +..|.  .-..|..||.+||..++.|++++|+++|||+++.|..|+|.||
T Consensus       214 a~G----~FF~~~dqk~~r-----------k~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH  278 (782)
T KOG3676|consen  214 ACG----AFFCPDDQKASR-----------KSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLH  278 (782)
T ss_pred             hhc----cccCcccccccc-----------cccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHH
Confidence            321    011000000000           01111  1234666777777777777777777777777777777777777


Q ss_pred             HHHHcCChhHHHHHHhcCCC--CCCC-CCCCcHHHHHHhcCCHHHHHHHHhc
Q psy8109         366 CAIAQNCLEVFNYLVNHGCD--LSVP-EGERTALHMASQFGNLEMVNYLLKH  414 (1011)
Q Consensus       366 ~A~~~g~~~iv~~Ll~~g~~--~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~  414 (1011)
                      ..+..-..+|..+++++|++  ..+. ..|.|||..|++.|..+|.+.+++.
T Consensus       279 ~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  279 MLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             HHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            77766666677777777766  3333 4556777777777777777777765

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.53  E-value=1.5e-13  Score=128.70  Aligned_cols=121  Identities=47%  Similarity=0.695  Sum_probs=96.4

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR  336 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~  336 (1011)
                      .|.|||+.|+..|+.+++++|++.+.+.+..+.. |.|||+.|+..++.+++++|+.+++  .++..+..|.||+|+|+.
T Consensus         6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~-g~~~l~~a~~~~~~~~~~~ll~~~~--~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           6 DGRTPLHLAASNGHLEVVKLLLENGADVNAKDND-GRTPLHLAAKNGHLEIVKLLLEKGA--DVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             CCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCC-CCcHHHHHHHcCCHHHHHHHHHcCC--CccccCCCCCCHHHHHHH
Confidence            6778888888888888888888888776555544 7788888888888888888888876  566677778888888888


Q ss_pred             cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHH
Q psy8109         337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV  380 (1011)
Q Consensus       337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll  380 (1011)
                      .++.+++++|+++|.+++..+..|.||+++|+..++.+++++|+
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            88888888888888777777778888888888888888887764

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.41  E-value=3.7e-12  Score=133.69  Aligned_cols=132  Identities=34%  Similarity=0.494  Sum_probs=120.6

Q ss_pred             CcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCCh-----HHHHHHHHHcCC--Ccccccc
Q psy8109         747 DITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGL-----YEIVDTLLEYNA--DTNLRTI  819 (1011)
Q Consensus       747 ~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~-----~~iv~~Ll~~g~--~~~~~~~  819 (1011)
                      .....+..+.++++.++..+..+++++|+..|++++..+..|.||||+|+..++     .+++++|++.|+  +.....+
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~  144 (235)
T COG0666          65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD  144 (235)
T ss_pred             ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence            344456668899999999999999999999999999999999999999999999     999999999999  5655578


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109         820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG  878 (1011)
Q Consensus       820 ~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g  878 (1011)
                      ..|.||||+|+..|+.+++++|++.|++++..+..|.|++++|+..++.++++.|+..+
T Consensus       145 ~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         145 EDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999976

>KOG4214|consensus

Probab=99.40  E-value=1.1e-12  Score=105.48  Aligned_cols=91  Identities=29%  Similarity=0.405  Sum_probs=45.0

Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhH
Q psy8109         296 LHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV  375 (1011)
Q Consensus       296 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~i  375 (1011)
                      +.+++++|..+-|+-.+..|-  ++|.. ..|++|||+||-.|+++++++|+..||+++..|..|-|||..|+..||.++
T Consensus         6 ~~W~vkNG~~DeVk~~v~~g~--nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c   82 (117)
T KOG4214|consen    6 VAWNVKNGEIDEVKQSVNEGL--NVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC   82 (117)
T ss_pred             HhhhhccCcHHHHHHHHHccc--cHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence            344444555554444444443  33322 134555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHhcCCCCCCC
Q psy8109         376 FNYLVNHGCDLSVP  389 (1011)
Q Consensus       376 v~~Ll~~g~~~~~~  389 (1011)
                      |++|+++|++-...
T Consensus        83 VklLL~~GAdrt~~   96 (117)
T KOG4214|consen   83 VKLLLQNGADRTIH   96 (117)
T ss_pred             HHHHHHcCccccee
Confidence            55555555554433

>KOG1710|consensus

Probab=99.38  E-value=1.1e-12  Score=128.30  Aligned_cols=122  Identities=24%  Similarity=0.210  Sum_probs=92.9

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCC
Q psy8109         755 NRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQ  834 (1011)
Q Consensus       755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~  834 (1011)
                      ...||.-++..|..+-...||..--.+|.+|..|.++|..|+..|+.++|++|++.|+|+|......++||||+||.+|+
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn   91 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN   91 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence            35677777777877777777766445777777788888878888888888888888888777667777788888888888


Q ss_pred             HHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHh
Q psy8109         835 LDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD  876 (1011)
Q Consensus       835 ~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~  876 (1011)
                      .++.++|++.|+.+...+.-|+||-..|+.-||.++|..+-.
T Consensus        92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen   92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence            888888888887777777777888877877777777766543

>KOG0515|consensus

Probab=99.36  E-value=1.6e-12  Score=137.25  Aligned_cols=101  Identities=26%  Similarity=0.395  Sum_probs=89.3

Q ss_pred             ccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHH
Q psy8109         792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV  871 (1011)
Q Consensus       792 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv  871 (1011)
                      |.-|+..|-+++|+..+..-.|+.. .+..|.|+||.|+..||.+||++|++.|+++|+.|.+||||||.|+.++++.++
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSq-pNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c  632 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQ-PNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC  632 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCC-CCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence            3457888999999999988888776 677899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCccccc-ccCCCHHh
Q psy8109         872 TFLLDAGSNIEKAT-KYRMTFES  893 (1011)
Q Consensus       872 ~~Ll~~ga~~~~~~-~~g~t~l~  893 (1011)
                      +.|+++|+-+.+.. .++.|+..
T Consensus       633 kqLVe~GaavfAsTlSDmeTa~e  655 (752)
T KOG0515|consen  633 KQLVESGAAVFASTLSDMETAAE  655 (752)
T ss_pred             HHHHhccceEEeeecccccchhh
Confidence            99999999887653 45666654

>KOG1710|consensus

Probab=99.36  E-value=2e-12  Score=126.57  Aligned_cols=120  Identities=26%  Similarity=0.308  Sum_probs=98.3

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCC-CcCCCCcccccccC
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDIL-DLKDTSPLLSSCRQ  798 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~-d~~g~t~L~~A~~~  798 (1011)
                      -..||.-+...++ .+-..-|+.. --++|.+|..|.++|..|+..|+.++|++||+.|+|+|.. +..+.||||.|+.+
T Consensus        12 ~~~~Lle~i~Knd-t~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS   89 (396)
T KOG1710|consen   12 PKSPLLEAIDKND-TEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS   89 (396)
T ss_pred             hhhHHHHHHccCc-HHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence            4578888888888 5555555554 4568888889999999999999999999999999988864 55688999999999


Q ss_pred             ChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHH
Q psy8109         799 GLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLL  842 (1011)
Q Consensus       799 g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll  842 (1011)
                      |+.++.++|++.|+.... .+.-|+|+-.+||.-|+.++|..+-
T Consensus        90 Gn~dvcrllldaGa~~~~-vNsvgrTAaqmAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   90 GNQDVCRLLLDAGARMYL-VNSVGRTAAQMAAFVGHHECVAIIN  132 (396)
T ss_pred             CCchHHHHHHhccCcccc-ccchhhhHHHHHHHhcchHHHHHHh
Confidence            999999999999988876 6678889999999999988888773

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.30  E-value=5.1e-12  Score=97.49  Aligned_cols=54  Identities=52%  Similarity=0.716  Sum_probs=44.8

Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHH
Q psy8109         822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL  875 (1011)
Q Consensus       822 g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll  875 (1011)
                      |+||||.||..|+.+++++|++.|+++|.+|.+|+||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            679999999999999999999999999999999999999999999999999986

...

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.29  E-value=3.3e-11  Score=126.39  Aligned_cols=123  Identities=35%  Similarity=0.517  Sum_probs=115.2

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC-----HHHHHHHHHCCC---CCCCCCcCCCCc
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN-----LDLLKFLLKAGA---DPDILDLKDTSP  791 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~-----~~iv~~Ll~~ga---d~~~~d~~g~t~  791 (1011)
                      +.++++.++..+. ..++.+++.. +++++..+..|.||||.|+..|+     .+++++|++.|+   ..+..+..|.||
T Consensus        73 ~~~~~~~~~~~~~-~~~~~~l~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tp  150 (235)
T COG0666          73 GRLPLHSAASKGD-DKIVKLLLAS-GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTP  150 (235)
T ss_pred             ccCHHHHHHHcCc-HHHHHHHHHc-CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCch
Confidence            7899999999999 8888899888 99999999999999999999999     999999999999   666669999999


Q ss_pred             ccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhcc
Q psy8109         792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN  845 (1011)
Q Consensus       792 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g  845 (1011)
                      ||+|+..|+.+++++|++.|++++. .+..|.|+++.|+..++.++++.|+..+
T Consensus       151 l~~A~~~~~~~~~~~ll~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         151 LHWAALNGDADIVELLLEAGADPNS-RNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             hHHHHHcCchHHHHHHHhcCCCCcc-cccCCCcchhhhcccchHHHHHHHHhcC
Confidence            9999999999999999999999998 6889999999999999999999999876

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.28  E-value=2.5e-12  Score=99.53  Aligned_cols=55  Identities=33%  Similarity=0.430  Sum_probs=26.1

Q ss_pred             HHhcc-CCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhH
Q psy8109         841 LLKYN-ADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSK  895 (1011)
Q Consensus       841 Ll~~g-a~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a  895 (1011)
                      |+++| +++|.+|..|.||||+|+..|+.++|++|++.|++++.+|.+|+||+++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            45666 67777777777777777777777777777777777777777777777765

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.28  E-value=7.7e-12  Score=149.44  Aligned_cols=104  Identities=24%  Similarity=0.241  Sum_probs=77.8

Q ss_pred             cccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHH
Q psy8109         791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDI  870 (1011)
Q Consensus       791 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~i  870 (1011)
                      .|+.|+..|+.++|++|+++|+++|. .+..|.||||+|+.+|+.++|++|+++|+++|.+|..|+||||+|+..|+.++
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~-~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNC-RDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            36677777777777777777777776 56777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHhc-------CCCcccccccCCCHHhhH
Q psy8109         871 VTFLLDA-------GSNIEKATKYRMTFESSK  895 (1011)
Q Consensus       871 v~~Ll~~-------ga~~~~~~~~g~t~l~~a  895 (1011)
                      +++|+++       |++++..+..|.+|+..+
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence            7777777       777776666666655443

>KOG0515|consensus

Probab=99.27  E-value=9.6e-12  Score=131.44  Aligned_cols=116  Identities=30%  Similarity=0.392  Sum_probs=99.7

Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhH
Q psy8109         296 LHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV  375 (1011)
Q Consensus       296 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~i  375 (1011)
                      |.-|+..|.+|+|+..+..-.  ++...+..|.||||.|+..||.+||++|++.|+++|+.|.+||||||+|+.+++..+
T Consensus       554 LLDaaLeGEldlVq~~i~ev~--DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~  631 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVT--DPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM  631 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhc--CCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence            445888999999999987655  677788899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCC--CCCCcHHHHHH--hcCCHHHHHHHHh
Q psy8109         376 FNYLVNHGCDLSVP--EGERTALHMAS--QFGNLEMVNYLLK  413 (1011)
Q Consensus       376 v~~Ll~~g~~~~~~--~~~~t~L~~Aa--~~g~~~iv~~Ll~  413 (1011)
                      ++.|++.|+-+-..  .+..||...+-  +-|...+.+||..
T Consensus       632 ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  632 CKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            99999999877654  44456665543  4578888888864

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.22  E-value=9.5e-12  Score=96.33  Aligned_cols=55  Identities=45%  Similarity=0.545  Sum_probs=32.3

Q ss_pred             HHHcC-CCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHH
Q psy8109         807 LLEYN-ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA  862 (1011)
Q Consensus       807 Ll~~g-~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A  862 (1011)
                      |+++| ++++. .+..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|
T Consensus         1 LL~~~~~~~n~-~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNA-QDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT----TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcC-cCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            57777 77776 888999999999999999999999999999999999999999987

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.22  E-value=2.2e-11  Score=93.88  Aligned_cols=54  Identities=48%  Similarity=0.799  Sum_probs=28.1

Q ss_pred             CCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHH
Q psy8109         327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV  380 (1011)
Q Consensus       327 g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll  380 (1011)
                      |+||||+||..|+.+++++|+++|+++|..|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            445556666666666666666555555555555556666665555555555553

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.20  E-value=3.3e-11  Score=144.08  Aligned_cols=104  Identities=29%  Similarity=0.389  Sum_probs=58.3

Q ss_pred             HHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHH
Q psy8109         758 ALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDI  837 (1011)
Q Consensus       758 ~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~i  837 (1011)
                      .|+.|+..|+.+++++|++.|+++|..|..|.||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|+.++
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~-~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL-LDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCCcHHH
Confidence            35555555555555555555555555555555555555555555555555555555554 45555555555555555555


Q ss_pred             HHHHHhc-------cCCcccccCCCCCHHHHH
Q psy8109         838 IKLLLKY-------NADINAEDKYGKIAFHSA  862 (1011)
Q Consensus       838 v~~Ll~~-------ga~in~~d~~g~taL~~A  862 (1011)
                      +++|+++       |++++..+..|.+|+..+
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence            5555555       555555555555544433

>KOG0818|consensus

Probab=98.63  E-value=5.9e-08  Score=102.58  Aligned_cols=86  Identities=33%  Similarity=0.352  Sum_probs=76.9

Q ss_pred             ccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHH
Q psy8109         792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV  871 (1011)
Q Consensus       792 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv  871 (1011)
                      ||..++.|+.++.-.|+..|+++|......|.||||.|+..|+.-=+++|+-+|||+++.|.+|+||+.||-..||-++.
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~la  216 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELA  216 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHH
Confidence            77788888888888888999999887778899999999999999999999999999999999999999999999998888


Q ss_pred             HHHHhc
Q psy8109         872 TFLLDA  877 (1011)
Q Consensus       872 ~~Ll~~  877 (1011)
                      +-|++.
T Consensus       217 eRl~e~  222 (669)
T KOG0818|consen  217 ERLVEI  222 (669)
T ss_pred             HHHHHH
Confidence            777764

>KOG0782|consensus

Probab=98.63  E-value=7.5e-08  Score=103.00  Aligned_cols=120  Identities=25%  Similarity=0.338  Sum_probs=99.2

Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHH
Q psy8109         262 LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLE  341 (1011)
Q Consensus       262 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~  341 (1011)
                      +..|+..+++--++.+..+|.+....... ..+.||+|+..|+-+||+|+++||...-+++.|..|.|+||-|+..++..
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~-~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~  948 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPD-HCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA  948 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcc-hhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence            66777777776666666677766555554 67889999999999999999999886667788888999999999999999


Q ss_pred             HHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhc
Q psy8109         342 IVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH  382 (1011)
Q Consensus       342 iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  382 (1011)
                      +.++|++.|+.+-..|..|.||-..|-+.|..++..||-+.
T Consensus       949 vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  949 VCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            99999999999888888899999999888988888888654

>KOG0506|consensus

Probab=98.60  E-value=3.4e-08  Score=103.89  Aligned_cols=92  Identities=21%  Similarity=0.324  Sum_probs=68.0

Q ss_pred             cCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCcccccCCCCCHHHHHHH
Q psy8109         786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK-YNADINAEDKYGKIAFHSACQ  864 (1011)
Q Consensus       786 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~ga~in~~d~~g~taL~~A~~  864 (1011)
                      .++..++++|+..|++..++.+.-.|.|.+. .|.+.+|+||.||..|+.+++++|++ .+.+++.+|.+|+|||.-|..
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~-~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMDLET-KDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhcccccc-cccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            3455667777777777777777777777776 67777777777777777777777775 367777777888888888887


Q ss_pred             cCCHHHHHHHHhcC
Q psy8109         865 AKNWDIVTFLLDAG  878 (1011)
Q Consensus       865 ~g~~~iv~~Ll~~g  878 (1011)
                      .+|.+++++|-+.-
T Consensus       583 F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  583 FKHKEVVKLLEEAQ  596 (622)
T ss_pred             cCcHHHHHHHHHHh
Confidence            78887777777653

>PF13606 Ank_3: Ankyrin repeat

Probab=98.59  E-value=5.7e-08  Score=63.55  Aligned_cols=29  Identities=31%  Similarity=0.626  Sum_probs=19.0

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy8109         854 YGKIAFHSACQAKNWDIVTFLLDAGSNIE  882 (1011)
Q Consensus       854 ~g~taL~~A~~~g~~~iv~~Ll~~ga~~~  882 (1011)
                      +|+||||+|++.|+.++|++|+++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            36666666666666666666666666665

>KOG0783|consensus

Probab=98.54  E-value=5e-08  Score=109.25  Aligned_cols=85  Identities=22%  Similarity=0.274  Sum_probs=70.9

Q ss_pred             CCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHH
Q psy8109         781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFH  860 (1011)
Q Consensus       781 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~  860 (1011)
                      .|+.|..|+|+||+|+..+..+++++|+++|++++......|+||||-|+.+|+++++-+|+.+|+....+|+.|..||.
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq  124 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ  124 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence            56778888888888888888888888888888888766668888888888888888888888888888888888888888


Q ss_pred             HHHHc
Q psy8109         861 SACQA  865 (1011)
Q Consensus       861 ~A~~~  865 (1011)
                      +-++-
T Consensus       125 ~~~r~  129 (1267)
T KOG0783|consen  125 FLSRV  129 (1267)
T ss_pred             HHhhc
Confidence            77663

>KOG0783|consensus

Probab=98.53  E-value=8e-08  Score=107.63  Aligned_cols=98  Identities=21%  Similarity=0.255  Sum_probs=82.8

Q ss_pred             HHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCc-CCCCcccccccCChHHHHHHHHHcCCC
Q psy8109         735 DIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL-KDTSPLLSSCRQGLYEIVDTLLEYNAD  813 (1011)
Q Consensus       735 ~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~-~g~t~L~~A~~~g~~~iv~~Ll~~g~~  813 (1011)
                      .+.-|+-..|+--.|..|..|+|+||+|+..|..+++++||++|+|++.+|. .|+||||.|+..|+++++..||.+|+.
T Consensus        32 qlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S  111 (1267)
T KOG0783|consen   32 QLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS  111 (1267)
T ss_pred             HHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc
Confidence            3445555555555788899999999999999999999999999999998886 589999999999999999999999988


Q ss_pred             ccccccCCCChHHHHHHHcC
Q psy8109         814 TNLRTIKHGSTALHTAAFHN  833 (1011)
Q Consensus       814 ~~~~~~~~g~t~L~~Aa~~g  833 (1011)
                      ... .|+.|..||..-++--
T Consensus       112 L~i-~Dkeglsplq~~~r~~  130 (1267)
T KOG0783|consen  112 LRI-KDKEGLSPLQFLSRVL  130 (1267)
T ss_pred             eEE-ecccCCCHHHHHhhcc
Confidence            876 8899999998776643

>PF13606 Ank_3: Ankyrin repeat

Probab=98.50  E-value=1.4e-07  Score=61.73  Aligned_cols=28  Identities=57%  Similarity=0.890  Sum_probs=19.9

Q ss_pred             CCCHHHHHHhcCcHHHHHHHHHCCCCCc
Q psy8109         327 GLTPLHIACRRKCLEIVKILLDKGADIN  354 (1011)
Q Consensus       327 g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n  354 (1011)
                      |+||||+||+.|+.++|++|+++|+|+|
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            6677777777777777777777777665

>KOG0506|consensus

Probab=98.45  E-value=1.7e-07  Score=98.78  Aligned_cols=91  Identities=16%  Similarity=0.183  Sum_probs=85.3

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHh-cCCCcccccccCCCHHhhHHhh
Q psy8109         820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD-AGSNIEKATKYRMTFESSKVVE  898 (1011)
Q Consensus       820 ~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~t~l~~a~~~  898 (1011)
                      ..+...+++|+..|.+..++.+.-.|.|++..|-+.+|+||.||..||.+++++|++ .+.+++..|.+|+|||+-|..-
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F  583 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF  583 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence            456678999999999999999999999999999999999999999999999999997 6899999999999999999999


Q ss_pred             CCHHHHHHhhhc
Q psy8109         899 KHVAKLRAANIY  910 (1011)
Q Consensus       899 ~~~~~~~~~~~~  910 (1011)
                      +|.++++++..+
T Consensus       584 ~h~~v~k~L~~~  595 (622)
T KOG0506|consen  584 KHKEVVKLLEEA  595 (622)
T ss_pred             CcHHHHHHHHHH
Confidence            999999988654

>KOG0818|consensus

Probab=98.44  E-value=6.7e-07  Score=94.78  Aligned_cols=84  Identities=27%  Similarity=0.341  Sum_probs=42.8

Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCCcccC-CCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChh
Q psy8109         296 LHVAAIVESVDIVKLLFDYGAEKSVNVQN-VAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE  374 (1011)
Q Consensus       296 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~  374 (1011)
                      ||..++.|+++..-.|+..|+  ++|..+ ..|.||||.|++.|+.--+++|+-+|||+++.|..|+||+.+|-..||-+
T Consensus       137 LhasvRt~nlet~LRll~lGA--~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~  214 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGA--QANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE  214 (669)
T ss_pred             HHHHhhcccHHHHHHHHHccc--ccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence            455555555555555555555  333332 23455555555555555555555555555555555555555555555555


Q ss_pred             HHHHHHh
Q psy8109         375 VFNYLVN  381 (1011)
Q Consensus       375 iv~~Ll~  381 (1011)
                      +.+.|++
T Consensus       215 laeRl~e  221 (669)
T KOG0818|consen  215 LAERLVE  221 (669)
T ss_pred             HHHHHHH
Confidence            5555544

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.44  E-value=2.3e-07  Score=62.85  Aligned_cols=31  Identities=35%  Similarity=0.528  Sum_probs=19.4

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCCccccc
Q psy8109         855 GKIAFHSACQAKNWDIVTFLLDAGSNIEKAT  885 (1011)
Q Consensus       855 g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~  885 (1011)
                      |+||||+|+..|+.+++++|+++|++++.+|
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            5666666666666666666666666666544

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0782|consensus

Probab=98.42  E-value=4e-07  Score=97.56  Aligned_cols=114  Identities=26%  Similarity=0.275  Sum_probs=54.0

Q ss_pred             HHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCC--ccccccCCCChHHHHHHHcCCHHHH
Q psy8109         761 FAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD--TNLRTIKHGSTALHTAAFHNQLDII  838 (1011)
Q Consensus       761 ~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~--~~~~~~~~g~t~L~~Aa~~g~~~iv  838 (1011)
                      .|+..+++--++.+..+|-+.-.++.+..+.||+|+..|+-+||+|++++|+.  ++. .+..|.|+||.|+..++..++
T Consensus       872 ~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~-~de~get~lhkaa~~~~r~vc  950 (1004)
T KOG0782|consen  872 RAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDM-ADETGETALHKAACQRNRAVC  950 (1004)
T ss_pred             HHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHH-HhhhhhHHHHHHHHhcchHHH
Confidence            34444444444444444444444444444555555555555555555555442  111 234445555555555555555


Q ss_pred             HHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHH
Q psy8109         839 KLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL  875 (1011)
Q Consensus       839 ~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll  875 (1011)
                      ++|++.|+.+-.+|..|.||-.-|-+.|+.++..||-
T Consensus       951 ~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle  987 (1004)
T KOG0782|consen  951 QLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLE  987 (1004)
T ss_pred             HHHHhcchhheecccCCCChHHHHHhcCCchHHHHHh
Confidence            5555555554444555555555555555555444443

>KOG0705|consensus

Probab=98.36  E-value=1.1e-06  Score=95.17  Aligned_cols=94  Identities=28%  Similarity=0.402  Sum_probs=84.6

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCcc--cCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC
Q psy8109         295 ALHVAAIVESVDIVKLLFDYGAEKSVNV--QNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNC  372 (1011)
Q Consensus       295 ~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~--~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~  372 (1011)
                      -|..|+...++..+-+||.||....+|.  .+.+|.||||+||+.|++.+.++|+-+|+|+-.+|..|+|+|.||-+.|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            4778888999999999999998655553  45677999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHhcCCCCCC
Q psy8109         373 LEVFNYLVNHGCDLSV  388 (1011)
Q Consensus       373 ~~iv~~Ll~~g~~~~~  388 (1011)
                      .+++..|+++|+....
T Consensus       707 qec~d~llq~gcp~e~  722 (749)
T KOG0705|consen  707 QECIDVLLQYGCPDEC  722 (749)
T ss_pred             HHHHHHHHHcCCCccc
Confidence            9999999999987653

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.34  E-value=5.9e-07  Score=60.80  Aligned_cols=33  Identities=58%  Similarity=0.732  Sum_probs=29.7

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHhccCCcccccC
Q psy8109         821 HGSTALHTAAFHNQLDIIKLLLKYNADINAEDK  853 (1011)
Q Consensus       821 ~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~  853 (1011)
                      +|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            488999999999999999999999999998763

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0705|consensus

Probab=98.24  E-value=1.7e-06  Score=93.72  Aligned_cols=91  Identities=30%  Similarity=0.306  Sum_probs=77.9

Q ss_pred             ccccccCChHHHHHHHHHcCCCc--cc-cccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCH
Q psy8109         792 LLSSCRQGLYEIVDTLLEYNADT--NL-RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW  868 (1011)
Q Consensus       792 L~~A~~~g~~~iv~~Ll~~g~~~--~~-~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~  868 (1011)
                      |..|+...++..+-+||.+|...  |. ..+..|+|+||+||..|+..+.++|+=+|+|+-++|..|+|||.||-+.|..
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq  707 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ  707 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence            45667777788888888888643  22 2456789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcc
Q psy8109         869 DIVTFLLDAGSNIE  882 (1011)
Q Consensus       869 ~iv~~Ll~~ga~~~  882 (1011)
                      +++.+|+.+|...+
T Consensus       708 ec~d~llq~gcp~e  721 (749)
T KOG0705|consen  708 ECIDVLLQYGCPDE  721 (749)
T ss_pred             HHHHHHHHcCCCcc
Confidence            99999999997643

>KOG3609|consensus

Probab=98.17  E-value=3.2e-06  Score=96.93  Aligned_cols=121  Identities=26%  Similarity=0.260  Sum_probs=78.3

Q ss_pred             CcHHHHHHHCCCHHHHHHHHHHhcC---CCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCccccccc
Q psy8109         721 MTPLHYASYRGDCNDIARFLVEECN---ADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCR  797 (1011)
Q Consensus       721 ~t~l~~A~~~g~~~~iv~~Ll~~~g---~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~  797 (1011)
                      .--...|+..|+ ...|+..++...   .++|++|.-|+++|+.|+.+.+.+++++|++.+...       ..+|..|+.
T Consensus        26 e~~fL~a~E~gd-~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~   97 (822)
T KOG3609|consen   26 EKGFLLAHENGD-VPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIA   97 (822)
T ss_pred             hHHHHHHHHcCC-hHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHH
Confidence            345667788888 555555444423   467777888888888888888888888888775443       357777888


Q ss_pred             CChHHHHHHHHHcCCCc---------cccccCCCChHHHHHHHcCCHHHHHHHHhccCCcc
Q psy8109         798 QGLYEIVDTLLEYNADT---------NLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN  849 (1011)
Q Consensus       798 ~g~~~iv~~Ll~~g~~~---------~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in  849 (1011)
                      .|..++|+.++.+-...         +...-..+.|||+.||..++.||+++|+..|+.+-
T Consensus        98 ~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen   98 VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence            88888888887764322         11122345566666666666666666666666553

>KOG3609|consensus

Probab=98.13  E-value=1e-05  Score=92.96  Aligned_cols=122  Identities=18%  Similarity=0.168  Sum_probs=101.4

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHCC----CCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHH
Q psy8109         755 NRTALNFAAFGNNLDLLKFLLKAG----ADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAA  830 (1011)
Q Consensus       755 g~t~L~~Aa~~g~~~iv~~Ll~~g----ad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa  830 (1011)
                      +.-....|+..|+...|+..++..    .++|..|.-|+++|+.|+.+.+.+++++|++++...        ..+|.+|+
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI   96 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAI   96 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHH
Confidence            444567899999999999888763    457788999999999999999999999999986554        35899999


Q ss_pred             HcCCHHHHHHHHhccCCc----------ccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccc
Q psy8109         831 FHNQLDIIKLLLKYNADI----------NAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKA  884 (1011)
Q Consensus       831 ~~g~~~iv~~Ll~~ga~i----------n~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~  884 (1011)
                      ..|..++|++++.+-...          ...-.-+.|||++||..++.||+++|+..|+++-..
T Consensus        97 ~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P  160 (822)
T KOG3609|consen   97 AVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP  160 (822)
T ss_pred             HHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence            999999999999763322          112234789999999999999999999999987654

>KOG0511|consensus

Probab=98.08  E-value=6.7e-06  Score=84.64  Aligned_cols=71  Identities=20%  Similarity=0.237  Sum_probs=51.8

Q ss_pred             ChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHh
Q psy8109         823 STALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFES  893 (1011)
Q Consensus       823 ~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~  893 (1011)
                      ..-|..||+.|..+.|++|++.|.++|++|....+||.+|+.+||.++|++|+++||=...-.-+|..++.
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Y  107 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHY  107 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhh
Confidence            34577777777777788777777777777777777888887788877888888777766555555555543

>KOG0522|consensus

Probab=98.00  E-value=8.1e-06  Score=88.38  Aligned_cols=89  Identities=28%  Similarity=0.384  Sum_probs=74.0

Q ss_pred             cHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChH
Q psy8109         722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLY  801 (1011)
Q Consensus       722 t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~  801 (1011)
                      -|+|+++...+...+.+.|.......++..|..|.||||+|+..|+.+.++.|+.+|+++..++..|++|||.|+..|+.
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence            35888888777666777666555777888888899999999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHc
Q psy8109         802 EIVDTLLEY  810 (1011)
Q Consensus       802 ~iv~~Ll~~  810 (1011)
                      +++..++.+
T Consensus       102 q~i~~vlr~  110 (560)
T KOG0522|consen  102 QIITEVLRH  110 (560)
T ss_pred             HHHHHHHHH
Confidence            877777654

>KOG0522|consensus

Probab=97.95  E-value=1.8e-05  Score=85.85  Aligned_cols=144  Identities=23%  Similarity=0.297  Sum_probs=95.2

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChh
Q psy8109         295 ALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE  374 (1011)
Q Consensus       295 ~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~  374 (1011)
                      |+|+++.....+-...++.......++..|..|.||||.|+..||.+.++.|+.+||++...+..|++|||-|+..|+.+
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q  102 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ  102 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence            47777777666544443333233367888888999999999999999999999999999889999999999999999998


Q ss_pred             HHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhccCccC---CCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCc
Q psy8109         375 VFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININH---QDKDGWTPLTCSIKGQASLEVFHSIIEAGADI  451 (1011)
Q Consensus       375 iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~---~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~  451 (1011)
                      ++..++.+--..        . ..-...+-..+++.|.+.++...   .+...|-||.--+..    .-+..+.+.|.++
T Consensus       103 ~i~~vlr~~~~q--------~-~~~~~~~~p~ll~~l~~~~DFYmE~~wdF~SWvPlvSrI~P----SD~~kIyK~G~~l  169 (560)
T KOG0522|consen  103 IITEVLRHLKYQ--------A-WEKWERRLPRLLAKLSEMPDFYMEMKWDFQSWIPLLSRILP----SDTCKIYKRGSSL  169 (560)
T ss_pred             HHHHHHHHhHHH--------H-HHHHHhcchHHHHHHHhCccceEEEEecceeehhhhhccCc----hhhHHHhhcccce
Confidence            888877753110        0 11123456777777777653322   233346666541111    1233445666654

>KOG2384|consensus

Probab=97.86  E-value=3.2e-05  Score=72.38  Aligned_cols=63  Identities=24%  Similarity=0.154  Sum_probs=36.7

Q ss_pred             ccccccCCCChHHHHHHHcCCHHHHHHHHhcc-CCcccccCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy8109         814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN-ADINAEDKYGKIAFHSACQAKNWDIVTFLLDA  877 (1011)
Q Consensus       814 ~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-a~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~  877 (1011)
                      +|. +|..||||||+|+..|+.+.|.+|+..| +.+...|..|.+++.+|-+.|+.++|..|.++
T Consensus         5 in~-rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    5 INA-RDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             ccc-hhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            443 4555566666666666666666666555 55555555566666666666666666555554

>KOG0521|consensus

Probab=97.85  E-value=7.2e-06  Score=97.55  Aligned_cols=87  Identities=22%  Similarity=0.222  Sum_probs=75.6

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhC
Q psy8109         820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEK  899 (1011)
Q Consensus       820 ~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  899 (1011)
                      ..|.|+||.|+..|..-++++|+++|+++|..|..|+||+|.+...|+...+..|+++||++++.+.+|.+++++|....
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~  733 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA  733 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999987766


Q ss_pred             CHHHHHH
Q psy8109         900 HVAKLRA  906 (1011)
Q Consensus       900 ~~~~~~~  906 (1011)
                      +.+++-.
T Consensus       734 ~~d~~~l  740 (785)
T KOG0521|consen  734 NADIVLL  740 (785)
T ss_pred             cccHHHH
Confidence            6555543

>KOG2384|consensus

Probab=97.85  E-value=1.7e-05  Score=74.16  Aligned_cols=70  Identities=24%  Similarity=0.279  Sum_probs=55.7

Q ss_pred             CCCcccccCCCccHHHHHHhCCCHHHHHHHHHCC-CCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCc
Q psy8109         745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG-ADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADT  814 (1011)
Q Consensus       745 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~  814 (1011)
                      +.++|.+|..|+|||+.|+..|+.+.+.||+.+| +.+..+|..|.+++.+|-+.|+.++|+.|.++..+-
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et   72 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET   72 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence            4577888888888888888888888888888888 778888888888888888888888888887764443

>KOG0511|consensus

Probab=97.83  E-value=3.9e-05  Score=79.13  Aligned_cols=57  Identities=32%  Similarity=0.384  Sum_probs=32.8

Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCc
Q psy8109         296 LHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADIN  354 (1011)
Q Consensus       296 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n  354 (1011)
                      |..||+.|+++.|++|++.|.  ++|..|....+||.+|+..||.++|++|+++||--.
T Consensus        40 lceacR~GD~d~v~~LVetgv--nVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~   96 (516)
T KOG0511|consen   40 LCEACRAGDVDRVRYLVETGV--NVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS   96 (516)
T ss_pred             HHHHhhcccHHHHHHHHHhCC--CcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc
Confidence            555555555555555555555  555555555556666666666666666665555443

>KOG0521|consensus

Probab=97.61  E-value=6.9e-05  Score=89.37  Aligned_cols=82  Identities=29%  Similarity=0.408  Sum_probs=40.9

Q ss_pred             CCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCH
Q psy8109         327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNL  405 (1011)
Q Consensus       327 g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~  405 (1011)
                      |.|+||.|+..|..-++++|+++|+++|..+..|++|+|.+...|+...+..|+++|++.+.. ..+.+++++|....+.
T Consensus       656 ~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~  735 (785)
T KOG0521|consen  656 GCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANA  735 (785)
T ss_pred             ccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccc
Confidence            445555555555555555555555555555555555555555555555555555555554444 4444555555444333


Q ss_pred             HHH
Q psy8109         406 EMV  408 (1011)
Q Consensus       406 ~iv  408 (1011)
                      +++
T Consensus       736 d~~  738 (785)
T KOG0521|consen  736 DIV  738 (785)
T ss_pred             cHH
Confidence            333

>KOG0520|consensus

Probab=97.42  E-value=6.8e-05  Score=88.37  Aligned_cols=127  Identities=20%  Similarity=0.155  Sum_probs=86.9

Q ss_pred             cccCCCccHHHHHHhCCCHHHHHHHHHC-CCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHH
Q psy8109         750 LRNFNNRTALNFAAFGNNLDLLKFLLKA-GADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHT  828 (1011)
Q Consensus       750 ~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~-gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~  828 (1011)
                      .....|++.+|+++..+..-+++.+++- |......|.+|..-+|+++..|..-.+....-.|..++. .|..||||||+
T Consensus       569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i-~D~~G~tpL~w  647 (975)
T KOG0520|consen  569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDI-RDRNGWTPLHW  647 (975)
T ss_pred             cCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeeccccccc-ccCCCCcccch
Confidence            3455678888888888888888888775 655566666666666664444433333333445666776 77778888888


Q ss_pred             HHHcCCHHHHHHHHhccCCcc------cccCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy8109         829 AAFHNQLDIIKLLLKYNADIN------AEDKYGKIAFHSACQAKNWDIVTFLLDA  877 (1011)
Q Consensus       829 Aa~~g~~~iv~~Ll~~ga~in------~~d~~g~taL~~A~~~g~~~iv~~Ll~~  877 (1011)
                      |+..|+..++..|++.|++.+      ..+-.|.|+-.+|..+|+..+..+|-+.
T Consensus       648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            888888888888886665433      2234577888888888888887777776

>KOG0520|consensus

Probab=97.39  E-value=0.00012  Score=86.36  Aligned_cols=124  Identities=20%  Similarity=0.093  Sum_probs=100.2

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG  799 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g  799 (1011)
                      +++.+|+++..++ ...++.+++..+......|.+|.-.+|.++..|..-.+....-.|..++.+|..|+||||+|+..|
T Consensus       574 ~~lllhL~a~~ly-awLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G  652 (975)
T KOG0520|consen  574 DMLLLHLLAELLY-AWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRG  652 (975)
T ss_pred             chHHHHHHHHHhH-HHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcC
Confidence            8999999999998 888888888645555566777777888855555544444455668889999999999999999999


Q ss_pred             hHHHHHHHHHcCCCcccccc-----CCCChHHHHHHHcCCHHHHHHHHhc
Q psy8109         800 LYEIVDTLLEYNADTNLRTI-----KHGSTALHTAAFHNQLDIIKLLLKY  844 (1011)
Q Consensus       800 ~~~iv~~Ll~~g~~~~~~~~-----~~g~t~L~~Aa~~g~~~iv~~Ll~~  844 (1011)
                      +..++..|++.|++....++     ..|.|+-..|..+|+..+.-+|-+.
T Consensus       653 ~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  653 REKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             HHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            99999999998887654332     4588999999999999999999876

>PLN03077 Protein ECB2; Provisional

Probab=96.93  E-value=2.1  Score=54.23  Aligned_cols=205  Identities=12%  Similarity=0.135  Sum_probs=104.1

Q ss_pred             CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHH-HhcCcHHHH----HHHHHCCCCCccCCCCCCcHHHHH
Q psy8109         293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIA-CRRKCLEIV----KILLDKGADINSGNDDGCTPLFCA  367 (1011)
Q Consensus       293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~A-a~~g~~~iv----~~Ll~~ga~~n~~~~~g~t~L~~A  367 (1011)
                      .+.+..-++.|+++-+..+++.-..     +|...++.|..+ ++.|..+-+    +.+...|..+|...   .+.+..|
T Consensus       125 n~li~~~~~~g~~~~A~~~f~~m~~-----~d~~~~n~li~~~~~~g~~~~A~~~f~~M~~~g~~Pd~~t---~~~ll~~  196 (857)
T PLN03077        125 NAMLSMFVRFGELVHAWYVFGKMPE-----RDLFSWNVLVGGYAKAGYFDEALCLYHRMLWAGVRPDVYT---FPCVLRT  196 (857)
T ss_pred             HHHHHHHHhCCChHHHHHHHhcCCC-----CCeeEHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCChhH---HHHHHHH
Confidence            3444555788888887777765442     333444544443 456665433    33344576664332   2333333


Q ss_pred             H-HcCCh----hHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhccCccCCCCCCCcHhHHHHh-cCC---CH
Q psy8109         368 I-AQNCL----EVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIK-GQA---SL  438 (1011)
Q Consensus       368 ~-~~g~~----~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~-~~~---~~  438 (1011)
                      + ..+..    ++...++..|..++.. ...+.+..-++.|+++-+..+++.-  ...|...++.+..+.. .+.   .+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~n~Li~~y~k~g~~~~A~~lf~~m--~~~d~~s~n~li~~~~~~g~~~eAl  273 (857)
T PLN03077        197 CGGIPDLARGREVHAHVVRFGFELDVD-VVNALITMYVKCGDVVSARLVFDRM--PRRDCISWNAMISGYFENGECLEGL  273 (857)
T ss_pred             hCCccchhhHHHHHHHHHHcCCCcccc-hHhHHHHHHhcCCCHHHHHHHHhcC--CCCCcchhHHHHHHHHhCCCHHHHH
Confidence            3 23333    3444555667665543 1235667777888888888888763  2234445555555222 111   23


Q ss_pred             HHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-----ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy8109         439 EVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-----HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKL  512 (1011)
Q Consensus       439 ~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-----~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  512 (1011)
                      +++..+...|..++....  .+.+...+..|..+..+-++.     +..++.  ....+.+..-++.|.++-...+++.
T Consensus       274 ~lf~~M~~~g~~Pd~~ty--~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~d~--~~~n~Li~~y~k~g~~~~A~~vf~~  348 (857)
T PLN03077        274 ELFFTMRELSVDPDLMTI--TSVISACELLGDERLGREMHGYVVKTGFAVDV--SVCNSLIQMYLSLGSWGEAEKVFSR  348 (857)
T ss_pred             HHHHHHHHcCCCCChhHH--HHHHHHHHhcCChHHHHHHHHHHHHhCCccch--HHHHHHHHHHHhcCCHHHHHHHHhh
Confidence            444445556666553321  234445556666666555554     111111  1112233444556666666666554

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=96.63  E-value=0.011  Score=56.02  Aligned_cols=139  Identities=17%  Similarity=0.138  Sum_probs=99.8

Q ss_pred             ChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcC
Q psy8109         259 DTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRK  338 (1011)
Q Consensus       259 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g  338 (1011)
                      ...|..|+..+.+.|++..-+...+-    ...+++.+..||+..+.|+|+|+-+.-.       -.+-.+-...|....
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~qnL~-------i~~~~~iFdIA~~~k  115 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQNLH-------IYNPEDIFDIAFAKK  115 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhhccC-------CCCchhhhhhhhhcc
Confidence            35688899999999999987764421    1125778999999999999999944321       222346677899999


Q ss_pred             cHHHHH----HHHHCCCCCccCCC--CCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHH
Q psy8109         339 CLEIVK----ILLDKGADINSGND--DGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLL  412 (1011)
Q Consensus       339 ~~~iv~----~Ll~~ga~~n~~~~--~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll  412 (1011)
                      ++++..    +++++...-...|.  --..-|..|+..|.++.+.-.+++|.+++     .++|..|+.++|..++.+++
T Consensus       116 DlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~-----~~vls~Av~ynhRkIL~yfi  190 (192)
T PF03158_consen  116 DLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD-----IIVLSQAVKYNHRKILDYFI  190 (192)
T ss_pred             chhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc-----HHHHHHHHHhhHHHHHHHhh
Confidence            888742    33333221100110  01134789999999999999999998876     48999999999999999987


Q ss_pred             h
Q psy8109         413 K  413 (1011)
Q Consensus       413 ~  413 (1011)
                      .
T Consensus       191 ~  191 (192)
T PF03158_consen  191 R  191 (192)
T ss_pred             c
Confidence            4

These proteins may be involved in promoting survival of infected macrophages [].

>KOG2505|consensus

Probab=96.32  E-value=0.0044  Score=67.06  Aligned_cols=63  Identities=22%  Similarity=0.232  Sum_probs=36.4

Q ss_pred             HHHHHHHHHcCCCcccc-----ccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHH
Q psy8109         801 YEIVDTLLEYNADTNLR-----TIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSAC  863 (1011)
Q Consensus       801 ~~iv~~Ll~~g~~~~~~-----~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~  863 (1011)
                      ...+++|.+++++.|..     .+....|+||+|+..|...+|.+||+.|+|+-.+|..|+||..++.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            55666777766665542     1122445666666666666666666666666666666666665554

>smart00248 ANK ankyrin repeats

Probab=95.91  E-value=0.012  Score=37.54  Aligned_cols=27  Identities=37%  Similarity=0.725  Sum_probs=16.7

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109         855 GKIAFHSACQAKNWDIVTFLLDAGSNI  881 (1011)
Q Consensus       855 g~taL~~A~~~g~~~iv~~Ll~~ga~~  881 (1011)
                      |.||+|+|+..++.+++++|+++|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            456666666666666666666665544

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PLN03077 Protein ECB2; Provisional

Probab=95.85  E-value=8.2  Score=49.02  Aligned_cols=415  Identities=9%  Similarity=-0.016  Sum_probs=191.9

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHH-HHHHHhCCHHHHHH----HHHcCCCCCCcccCCCCCCHHHHH
Q psy8109         260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTAL-HVAAIVESVDIVKL----LFDYGAEKSVNVQNVAGLTPLHIA  334 (1011)
Q Consensus       260 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L-~~Aa~~g~~~iv~~----Ll~~~~~~~~~~~~~~g~t~L~~A  334 (1011)
                      +.+..-+..|+++.+..+++.-..++..    .++.| ...++.|..+-+..    +...|..     .|....+.+.-|
T Consensus       126 ~li~~~~~~g~~~~A~~~f~~m~~~d~~----~~n~li~~~~~~g~~~~A~~~f~~M~~~g~~-----Pd~~t~~~ll~~  196 (857)
T PLN03077        126 AMLSMFVRFGELVHAWYVFGKMPERDLF----SWNVLVGGYAKAGYFDEALCLYHRMLWAGVR-----PDVYTFPCVLRT  196 (857)
T ss_pred             HHHHHHHhCCChHHHHHHHhcCCCCCee----EHHHHHHHHHhCCCHHHHHHHHHHHHHcCCC-----CChhHHHHHHHH
Confidence            4455557889988888888776554332    34444 44456676554333    3334442     222233334333


Q ss_pred             H-hcCcH----HHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHH
Q psy8109         335 C-RRKCL----EIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVN  409 (1011)
Q Consensus       335 a-~~g~~----~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~  409 (1011)
                      + ..+++    ++...++..|..++..  ...+.+..-++.|..+-+..+++.-...+.. ...+.+..-++.|..+-..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~~d~~-s~n~li~~~~~~g~~~eAl  273 (857)
T PLN03077        197 CGGIPDLARGREVHAHVVRFGFELDVD--VVNALITMYVKCGDVVSARLVFDRMPRRDCI-SWNAMISGYFENGECLEGL  273 (857)
T ss_pred             hCCccchhhHHHHHHHHHHcCCCcccc--hHhHHHHHHhcCCCHHHHHHHHhcCCCCCcc-hhHHHHHHHHhCCCHHHHH
Confidence            3 23333    3444455667665432  2334566667788888777777754433321 1123344445666655444


Q ss_pred             HHHhcc--CccCCCCCCCcHhHHHHhcCCCH----HHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHhccCC
Q psy8109         410 YLLKHI--NINHQDKDGWTPLTCSIKGQASL----EVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDI  483 (1011)
Q Consensus       410 ~Ll~~~--~~~~~~~~~~t~l~~a~~~~~~~----~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~  483 (1011)
                      .++..-  .--..|....+.+..+....+..    ++.......|..++...  ..+.+..-+..|.++-..-+++... 
T Consensus       274 ~lf~~M~~~g~~Pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~d~~~--~n~Li~~y~k~g~~~~A~~vf~~m~-  350 (857)
T PLN03077        274 ELFFTMRELSVDPDLMTITSVISACELLGDERLGREMHGYVVKTGFAVDVSV--CNSLIQMYLSLGSWGEAEKVFSRME-  350 (857)
T ss_pred             HHHHHHHHcCCCCChhHHHHHHHHHHhcCChHHHHHHHHHHHHhCCccchHH--HHHHHHHHHhcCCHHHHHHHHhhCC-
Confidence            444332  00112222333333333222233    44555556676655332  2455666678899888888877432 


Q ss_pred             CCCCCCCCcHHHH-HHHcCCHH----HHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc---cCCCCCCCCC
Q psy8109         484 NSENDLGKTPIYF-AIKNNHLE----IFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH---IGVNLQDNKG  555 (1011)
Q Consensus       484 ~~~~~~g~t~L~~-A~~~g~~~----iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~---~~~~~~~~~g  555 (1011)
                       ..+...++.+.. -++.|..+    +++.+.+.|..++..  .-.+.+...+..|..+....++..   .+........
T Consensus       351 -~~d~~s~n~li~~~~~~g~~~~A~~lf~~M~~~g~~Pd~~--t~~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~~~~~~  427 (857)
T PLN03077        351 -TKDAVSWTAMISGYEKNGLPDKALETYALMEQDNVSPDEI--TIASVLSACACLGDLDVGVKLHELAERKGLISYVVVA  427 (857)
T ss_pred             -CCCeeeHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCce--eHHHHHHHHhccchHHHHHHHHHHHHHhCCCcchHHH
Confidence             233334455443 34566654    334444456554432  122344555566777766666554   1111111111


Q ss_pred             CCHHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHh-hccccccCCCCC-cHHHHHHHcCCHHH
Q psy8109         556 CTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMK-YFDVNIENDIGE-TPLHVAVSHGCLEA  633 (1011)
Q Consensus       556 ~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~g~-t~L~~A~~~g~~~i  633 (1011)
                      .+.+..-+..|+.+-...+++.-.+.+.....+.+...+..|..+-...++. ....-..|.... +.|...+..|.++.
T Consensus       428 n~Li~~y~k~g~~~~A~~vf~~m~~~d~vs~~~mi~~~~~~g~~~eA~~lf~~m~~~~~pd~~t~~~lL~a~~~~g~l~~  507 (857)
T PLN03077        428 NALIEMYSKCKCIDKALEVFHNIPEKDVISWTSIIAGLRLNNRCFEALIFFRQMLLTLKPNSVTLIAALSACARIGALMC  507 (857)
T ss_pred             HHHHHHHHHcCCHHHHHHHHHhCCCCCeeeHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCHhHHHHHHHHHhhhchHHH
Confidence            1123344556777666666654333222211233333444555443333332 110011111111 12233334455444


Q ss_pred             HHHHHh---hCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHcCCCH
Q psy8109         634 VKFLLN---TKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSL  698 (1011)
Q Consensus       634 v~~Ll~---~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~~~  698 (1011)
                      .+.++.   ..|...+..  .+...+..-+..|+.+-...+++..    ..+. .++.+..+....|..
T Consensus       508 ~~~i~~~~~~~g~~~~~~--~~naLi~~y~k~G~~~~A~~~f~~~----~~d~~s~n~lI~~~~~~G~~  570 (857)
T PLN03077        508 GKEIHAHVLRTGIGFDGF--LPNALLDLYVRCGRMNYAWNQFNSH----EKDVVSWNILLTGYVAHGKG  570 (857)
T ss_pred             hHHHHHHHHHhCCCccce--echHHHHHHHHcCCHHHHHHHHHhc----CCChhhHHHHHHHHHHcCCH
Confidence            333322   134433322  1223344445566665555554432    1111 455555555555543

>smart00248 ANK ankyrin repeats

Probab=95.63  E-value=0.02  Score=36.52  Aligned_cols=26  Identities=65%  Similarity=0.995  Sum_probs=13.7

Q ss_pred             CCCHHHHHHhcCcHHHHHHHHHCCCC
Q psy8109         327 GLTPLHIACRRKCLEIVKILLDKGAD  352 (1011)
Q Consensus       327 g~t~L~~Aa~~g~~~iv~~Ll~~ga~  352 (1011)
                      |.||+|+|+..|+.+++++|+++|.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            34555555555555555555555443

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505|consensus

Probab=95.59  E-value=0.037  Score=60.20  Aligned_cols=65  Identities=23%  Similarity=0.299  Sum_probs=48.6

Q ss_pred             HHHHHHHHHhcCCCccc------ccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109         734 NDIARFLVEECNADITL------RNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG  799 (1011)
Q Consensus       734 ~~iv~~Ll~~~g~~~~~------~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g  799 (1011)
                      ...+++|.++ +.+.|.      .+....|+||+|+..|.-++|.+||+.|+|+.+.|..|.||.+++....
T Consensus       404 p~~ie~lken-~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nkd  474 (591)
T KOG2505|consen  404 PDSIEALKEN-LLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANKD  474 (591)
T ss_pred             hhHHHHHHhc-CCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccHH
Confidence            4455555555 444432      2333568999999999999999999999999999999999998887443

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.44  E-value=0.19  Score=49.16  Aligned_cols=113  Identities=19%  Similarity=0.266  Sum_probs=52.6

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCC----CCCHHHHHHh
Q psy8109         261 PLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVA----GLTPLHIACR  336 (1011)
Q Consensus       261 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~----g~t~L~~Aa~  336 (1011)
                      .|.-|+...+++.+.-++....+        -.++|.+|...+..+++.+|+....   ...+|..    +..-+.|+..
T Consensus       156 sledAV~AsN~~~i~~~VtdKkd--------A~~Am~~si~~~K~dva~~lls~f~---ft~~dv~~~~~~~ydieY~LS  224 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDKKD--------AHQAMWLSIGNAKEDVALYLLSKFN---FTKQDVASMEKELYDIEYLLS  224 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcchHH--------HHHHHHHHhcccHHHHHHHHHhhcc---eecchhhhcCcchhhHHHHHh
Confidence            35556666666555555443221        2345666666666666666665321   1111100    1111222211


Q ss_pred             --cCcHHHHHHHHHCC-CCCcc---CCCCCCcHHHHHHHcCChhHHHHHHhcCC
Q psy8109         337 --RKCLEIVKILLDKG-ADINS---GNDDGCTPLFCAIAQNCLEVFNYLVNHGC  384 (1011)
Q Consensus       337 --~g~~~iv~~Ll~~g-a~~n~---~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~  384 (1011)
                        ..+..++++++++| +++|.   .-..|.|.|.-|+.+++.+++.+|+++|+
T Consensus       225 ~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  225 EHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             hcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence              12344555555554 23332   12345555666666666666666666554

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=95.11  E-value=0.21  Score=47.66  Aligned_cols=45  Identities=20%  Similarity=0.144  Sum_probs=28.3

Q ss_pred             HHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy8109         621 PLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILL  672 (1011)
Q Consensus       621 ~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  672 (1011)
                      -|..|+..|-+..+.-.++ +|-+++.      ++|..|+..++..++.+++
T Consensus       146 hl~~a~~kgll~F~letlk-ygg~~~~------~vls~Av~ynhRkIL~yfi  190 (192)
T PF03158_consen  146 HLEKAAAKGLLPFVLETLK-YGGNVDI------IVLSQAVKYNHRKILDYFI  190 (192)
T ss_pred             HHHHHHHCCCHHHHHHHHH-cCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence            3556677777766666666 4444332      5677777777777776665

These proteins may be involved in promoting survival of infected macrophages [].

>KOG3911|consensus

Probab=94.06  E-value=0.0076  Score=61.93  Aligned_cols=62  Identities=8%  Similarity=-0.263  Sum_probs=47.5

Q ss_pred             CCCCccceeecccccCChHHHHHHHHHHHHH---HhhhhhHHHHHHHHHhccCCCccccccccccC
Q psy8109           2 DPRPGCVDVMLPVIKIDPERYIQVLLEIKKE---INRKSDNLSKLLTKFSSLKRGEYPYGLKKIKR   64 (1011)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (1011)
                      +|++|++ +..|..|-++.+.-...++..++   ..+.|.-.....+.|.++.+|++|.+|||+++
T Consensus       269 ~~~~~~~-~~~~~~~~~~~~~~d~~~~~lr~dy~~~~~r~~~~~~~q~~e~~~r~~~~~~ikk~~~  333 (378)
T KOG3911|consen  269 YDGSKKF-KSSEGGDPLAGETPDPGEPLLRFDYEAVAKRLIEMASRQKTERKNRKRLKKQIKKRQD  333 (378)
T ss_pred             ccccccc-cCCccCCcccCCCCCCCCchhcccHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHh
Confidence            5777777 77777777777766666655555   67777788888888888888888888888866

>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional

Probab=93.56  E-value=16  Score=45.12  Aligned_cols=86  Identities=14%  Similarity=0.135  Sum_probs=40.7

Q ss_pred             HHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHH-HHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHcCCCHH
Q psy8109         622 LHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALF-FACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLD  699 (1011)
Q Consensus       622 L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~-~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~~~~  699 (1011)
                      +..-+..|.++-+.-+++..+..++..   .++.|. .....|+.+..+...+.-......+. .+..|.......|..+
T Consensus       469 i~~l~r~G~~~eA~~~~~~~~~~p~~~---~~~~Ll~a~~~~g~~~~a~~~~~~l~~~~p~~~~~y~~L~~~y~~~G~~~  545 (697)
T PLN03081        469 IELLGREGLLDEAYAMIRRAPFKPTVN---MWAALLTACRIHKNLELGRLAAEKLYGMGPEKLNNYVVLLNLYNSSGRQA  545 (697)
T ss_pred             HHHHHhcCCHHHHHHHHHHCCCCCCHH---HHHHHHHHHHHcCCcHHHHHHHHHHhCCCCCCCcchHHHHHHHHhCCCHH
Confidence            344456666666655665444333221   233333 33456777766655544222222222 3444444444456553


Q ss_pred             ----HHHHHHhCCCC
Q psy8109         700 ----IIKMLVKYGAD  710 (1011)
Q Consensus       700 ----iv~~Ll~~g~~  710 (1011)
                          +.+.+.+.|..
T Consensus       546 ~A~~v~~~m~~~g~~  560 (697)
T PLN03081        546 EAAKVVETLKRKGLS  560 (697)
T ss_pred             HHHHHHHHHHHcCCc
Confidence                44445555543

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=93.14  E-value=0.61  Score=45.82  Aligned_cols=120  Identities=23%  Similarity=0.271  Sum_probs=75.1

Q ss_pred             HHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHH
Q psy8109         621 PLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDI  700 (1011)
Q Consensus       621 ~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~i  700 (1011)
                      .|.-|+...+++-+.-++..      .  .+-.+++.+|+..+..+++-+|+.+- ++...       -.+.. ...+.=
T Consensus       156 sledAV~AsN~~~i~~~Vtd------K--kdA~~Am~~si~~~K~dva~~lls~f-~ft~~-------dv~~~-~~~~yd  218 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTD------K--KDAHQAMWLSIGNAKEDVALYLLSKF-NFTKQ-------DVASM-EKELYD  218 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcc------h--HHHHHHHHHHhcccHHHHHHHHHhhc-ceecc-------hhhhc-Ccchhh
Confidence            56777777787777777651      1  12346788888888888888887641 11111       11111 122333


Q ss_pred             HHHHHhC-CCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCccc---ccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109         701 IKMLVKY-GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITL---RNFNNRTALNFAAFGNNLDLLKFLLK  776 (1011)
Q Consensus       701 v~~Ll~~-g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~---~~~~g~t~L~~Aa~~g~~~iv~~Ll~  776 (1011)
                      ++++++. |++                       ..|+++++++.-+++|.   ....|.|.|..|...++.+++.+||+
T Consensus       219 ieY~LS~h~a~-----------------------~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk  275 (284)
T PF06128_consen  219 IEYLLSEHSAS-----------------------YKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLK  275 (284)
T ss_pred             HHHHHhhcCCc-----------------------HHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHH
Confidence            4455432 322                       56777777775556654   24568889999999999999999998


Q ss_pred             CCCC
Q psy8109         777 AGAD  780 (1011)
Q Consensus       777 ~gad  780 (1011)
                      +||-
T Consensus       276 ~GA~  279 (284)
T PF06128_consen  276 YGAI  279 (284)
T ss_pred             cCcc
Confidence            8874

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional

Probab=92.20  E-value=37  Score=41.97  Aligned_cols=20  Identities=5%  Similarity=0.190  Sum_probs=12.7

Q ss_pred             hHHHHHHHcCCHHHHHHHHh
Q psy8109         460 TALHLACYFGNLAMVNYLVK  479 (1011)
Q Consensus       460 t~L~~Aa~~g~~~iv~~Ll~  479 (1011)
                      +.+..-+..|.++-...+++
T Consensus       264 ~Li~~y~k~g~~~~A~~vf~  283 (697)
T PLN03081        264 ALIDMYSKCGDIEDARCVFD  283 (697)
T ss_pred             HHHHHHHHCCCHHHHHHHHH
Confidence            44555666777776666665

>PLN03218 maturation of RBCL 1; Provisional

Probab=90.87  E-value=12  Score=48.03  Aligned_cols=141  Identities=11%  Similarity=0.057  Sum_probs=61.2

Q ss_pred             HHhcCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCC----HHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHH
Q psy8109         399 ASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQAS----LEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMV  474 (1011)
Q Consensus       399 Aa~~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~----~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv  474 (1011)
                      .+..|..+-+..++.....  .+...++.+..+....+.    ..++..+.+.|..++...  -.+.+...+..|.++.+
T Consensus       416 ~~~~g~~~eAl~lf~~M~~--pd~~Tyn~LL~a~~k~g~~e~A~~lf~~M~~~Gl~pD~~t--ynsLI~~y~k~G~vd~A  491 (1060)
T PLN03218        416 CKKQRAVKEAFRFAKLIRN--PTLSTFNMLMSVCASSQDIDGALRVLRLVQEAGLKADCKL--YTTLISTCAKSGKVDAM  491 (1060)
T ss_pred             HHHCCCHHHHHHHHHHcCC--CCHHHHHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCcCHHHH
Confidence            3455666555555443211  233333333332222223    344445555666554322  13445555677777666


Q ss_pred             HHHHhccCCC--CCCCCCC-cHHHHHHHcCCHHH----HHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc
Q psy8109         475 NYLVKHIDIN--SENDLGK-TPIYFAIKNNHLEI----FNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH  545 (1011)
Q Consensus       475 ~~Ll~~~~~~--~~~~~g~-t~L~~A~~~g~~~i----v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  545 (1011)
                      .-+++.....  ..|...+ +.+...++.|..+-    ++.+.+.|..++...  ..+.+...+..|..+-...++..
T Consensus       492 ~~vf~eM~~~Gv~PdvvTynaLI~gy~k~G~~eeAl~lf~~M~~~Gv~PD~vT--YnsLI~a~~k~G~~deA~~lf~e  567 (1060)
T PLN03218        492 FEVFHEMVNAGVEANVHTFGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVV--FNALISACGQSGAVDRAFDVLAE  567 (1060)
T ss_pred             HHHHHHHHHcCCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHH
Confidence            5555411100  0111112 22334455666543    333444455443221  12334445556666655544443

>PLN03218 maturation of RBCL 1; Provisional

Probab=90.54  E-value=6.7  Score=50.08  Aligned_cols=34  Identities=9%  Similarity=0.055  Sum_probs=14.4

Q ss_pred             HHhCCCCccccCCCCHHHHHHHcCChhhHHHHHh
Q psy8109         574 LINSNADITMYKNDSPLHLACATGNMDMITYAMK  607 (1011)
Q Consensus       574 Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~  607 (1011)
                      +.+.|..++.....+.+...+..|..+-...++.
T Consensus       533 M~~~Gv~PD~vTYnsLI~a~~k~G~~deA~~lf~  566 (1060)
T PLN03218        533 MRSKNVKPDRVVFNALISACGQSGAVDRAFDVLA  566 (1060)
T ss_pred             HHHcCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence            3334443333222234444455555554444443

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=90.08  E-value=0.86  Score=37.60  Aligned_cols=47  Identities=23%  Similarity=0.429  Sum_probs=34.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHc
Q psy8109         260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDY  314 (1011)
Q Consensus       260 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~  314 (1011)
                      ..|..|+.+|+.|+++.+++.+. +       ....+..|+...+-++++||++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~~-~-------~~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKNK-P-------DNDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhc-c-------HHHHHHHHHHHhhHHHHHHHHHh
Confidence            45788888888888888886652 1       13468888888888888888775

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>KOG3911|consensus

Probab=84.37  E-value=2.1  Score=44.79  Aligned_cols=59  Identities=22%  Similarity=0.231  Sum_probs=47.4

Q ss_pred             CCCCCccceeec-ccccCChHHHHHHH----HHHHHHHhhhhhHHHHHHHHHhccCCCccccccc
Q psy8109           1 MDPRPGCVDVML-PVIKIDPERYIQVL----LEIKKEINRKSDNLSKLLTKFSSLKRGEYPYGLK   60 (1011)
Q Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   60 (1011)
                      .||-||++-+.. |++.||-..++.-+    +...+ .++.|+++.+.|+++-.++.|.||--.=
T Consensus       281 ~~~~~~~~~d~~~~~lr~dy~~~~~r~~~~~~~q~~-e~~~r~~~~~~ikk~~~~a~~~~~e~~~  344 (378)
T KOG3911|consen  281 GDPLAGETPDPGEPLLRFDYEAVAKRLIEMASRQKT-ERKNRKRLKKQIKKRQDLAGGAFQEDGD  344 (378)
T ss_pred             CCcccCCCCCCCCchhcccHHHHHHHHHHHHHhhcc-chhhhhHHHHHHHHHHhhhccccccccC
Confidence            489999999999 99999987555433    33333 5999999999999999999998775443

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=83.96  E-value=1.4  Score=36.33  Aligned_cols=47  Identities=26%  Similarity=0.287  Sum_probs=29.6

Q ss_pred             CHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhc
Q psy8109         329 TPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH  382 (1011)
Q Consensus       329 t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  382 (1011)
                      ..+..|+..|+.|+++.+++.+ .++      ...+..|+...+-++++||++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            4566777777777777776544 111      2356677777777777777665

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	1011
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		1e-35
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		1e-32
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		4e-28
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-20
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		3e-20
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		4e-08
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-20
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-17
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-16
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-14
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-13
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		6e-20
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		5e-15
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		2e-12
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		3e-04
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-19
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-14
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-14
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		2e-19
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		3e-19
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		7e-14
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		2e-12
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		3e-04
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		9e-19
2xee_A	157	Structural Determinants For Improved Thermal Stabil		1e-18
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		1e-18
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		1e-18
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		2e-15
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-18
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		7e-16
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		8e-14
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-13
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-12
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-18
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		3e-18
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		3e-17
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		5e-18
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		5e-17
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		2e-14
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		4e-14
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		3e-12
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		4e-11
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		5e-18
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		3e-17
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		8e-18
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-14
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		4e-14
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		5e-12
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		5e-12
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		8e-11
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		8e-18
1uoh_A	226	Human Gankyrin Length = 226		8e-18
1uoh_A	226	Human Gankyrin Length = 226		2e-14
1uoh_A	226	Human Gankyrin Length = 226		5e-14
1uoh_A	226	Human Gankyrin Length = 226		5e-12
1uoh_A	226	Human Gankyrin Length = 226		8e-11
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-17
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		3e-08
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-17
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-15
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-15
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-15
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-13
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-17
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		5e-15
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		6e-07
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		2e-17
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		6e-13
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		3e-10
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		3e-07
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		4e-17
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		4e-17
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		5e-17
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		3e-15
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		1e-14
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		5e-12
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		1e-11
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		6e-11
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		5e-17
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		5e-16
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		1e-13
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		6e-05
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		6e-17
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		7e-17
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		4e-15
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		1e-14
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		7e-12
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		1e-11
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		9e-11
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		7e-17
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		8e-17
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		1e-14
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		1e-14
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		8e-17
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		9e-17
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		3e-16
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		9e-17
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		3e-16
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		6e-08
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		1e-15
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		2e-15
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		5e-09
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		2e-15
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		5e-09
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		2e-15
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		6e-09
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		2e-14
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		3e-14
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		6e-14
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		3e-06
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-13
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		2e-12
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		3e-12
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		5e-12
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		1e-13
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		1e-13
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		1e-09
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		6e-06
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		4e-04
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		2e-13
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		3e-12
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		4e-13
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		5e-13
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		5e-12
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		5e-11
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		7e-13
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		1e-12
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		1e-11
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		2e-09
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		6e-12
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		2e-10
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		4e-10
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		8e-08
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		7e-12
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		9e-12
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		3e-05
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		2e-11
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		5e-11
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		2e-09
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		2e-05
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		6e-11
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		2e-09
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		4e-08
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		2e-06
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		4e-05
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		9e-11
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		1e-10
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		2e-08
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		2e-05
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-10
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		3e-10
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		2e-08
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		2e-05
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		3e-10
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		3e-08
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		6e-07
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		9e-06
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		3e-04
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		4e-10
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		8e-09
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		7e-08
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		3e-06
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		3e-05
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		5e-10
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		2e-08
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		3e-05
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		8e-10
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		5e-06
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		4e-05
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		1e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		1e-09
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		1e-09
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-09
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		1e-08
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		5e-08
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-07
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		2e-09
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		1e-08
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		6e-08
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-09
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		1e-08
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		5e-08
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-07
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		2e-09
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		1e-06
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		4e-06
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		6e-06
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		2e-09
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		5e-09
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		9e-09
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		6e-08
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		2e-07
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		3e-09
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		3e-09
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		1e-06
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		4e-06
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		5e-06
3so8_A	162	Crystal Structure Of Ankra Length = 162		3e-09
3so8_A	162	Crystal Structure Of Ankra Length = 162		1e-06
3so8_A	162	Crystal Structure Of Ankra Length = 162		4e-06
3so8_A	162	Crystal Structure Of Ankra Length = 162		5e-06
1oy3_D	282	Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer		3e-09
1k3z_D	282	X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodi		3e-09
2xen_A	91	Structural Determinants For Improved Thermal Stabil		5e-09
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		7e-09
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		1e-06
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		5e-05
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		6e-08
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		2e-07
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		6e-08
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-07
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		8e-08
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		2e-07
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		3e-07
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		2e-07
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		3e-07
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		2e-07
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		1e-05
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		5e-07
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		2e-04
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		7e-07
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		5e-04
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		8e-07
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		5e-04
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		2e-06
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		6e-04
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		2e-06
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		4e-05
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		4e-06
1ycs_B	239	P53-53bp2 Complex Length = 239		4e-06
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		5e-06
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		2e-05
3ljn_A	364	Ankyrin Repeat Protein From Leishmania Major Length		1e-04
3ljn_A	364	Ankyrin Repeat Protein From Leishmania Major Length		1e-04
3ljn_A	364	Ankyrin Repeat Protein From Leishmania Major Length		2e-04
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		1e-04
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		8e-04
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		1e-04
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		4e-04
1ymp_A	135	The Crystal Structure Of A Partial Mouse Notch-1 An		2e-04
2vge_A	229	Crystal Structure Of The C-Terminal Region Of Human		3e-04
1d9s_A	136	Tumor Suppressor P15(Ink4b) Structure By Comparativ		7e-04
3ui2_A	244	Crystal Structure Of The Cpsrp54 Tail Bound To Cpsr		8e-04
3deo_A	183	Structural Basis For Specific Substrate Recognition		8e-04

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  148 bits (374), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 186/373 (49%), Gaps = 12/373 (3%)
Query: 328 LTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLS 387
           LTPLH+A     L IVK LL +GA  N  N    TPL  A      EV  YL+ +   ++
Sbjct: 15  LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 388 V-PEGERTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSII 445
              + ++T LH A++ G+  MV  LL+ + N N     G TPL  + + +  +E   +++
Sbjct: 75  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAR-EGHVETVLALL 133
Query: 446 EAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLE 504
           E  A        G T LH+A  +G + +   L+ +    N+    G TP++ A+ +N+L+
Sbjct: 134 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLD 193
Query: 505 IFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTPLHCAI 563
           I  LLL  G        + +T LH+A +   +E+   LL + G  N +  +G TPLH A 
Sbjct: 194 IVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA 253
Query: 564 VGNQLEVFNHLIN--SNADITMYKNDSPLHLACATGNMDMITYAMKY-FDVNIENDIGET 620
                E+   L++  +N ++      +PLHL    G++ +    +K+   V+    +G T
Sbjct: 254 QEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYT 313
Query: 621 PLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN- 679
           PLHVA  +G ++ VKFLL  +  DVN KTK G + L  A      D+V +LL+  A  N 
Sbjct: 314 PLHVASHYGNIKLVKFLLQHQ-ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372
Query: 680 -LGDGTYTPLYTA 691
              DGT TPL  A
Sbjct: 373 VSSDGT-TPLAIA 384

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  139 bits (349), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 180/365 (49%), Gaps = 18/365 (4%)
Query: 524 FTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADIT 582
            T LHVA     + +V  LL      N+ + K  TPLH A      EV  +L+ + A + 
Sbjct: 15  LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 583 MYKND--SPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLN 639
               D  +PLH A   G+ +M+   ++   + N+    G TPLH+A   G +E V  LL 
Sbjct: 75  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 134
Query: 640 TKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNL-GDGTYTPLYTALMKDPSL 698
            K       TK G T L  A    ++ + E+LLE +A  N  G    TPL+ A+  + +L
Sbjct: 135 -KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHN-NL 192
Query: 699 DIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE---ECNADITLRNFNN 755
           DI+K+L+  G   +  + A    TPLH A+ +    ++AR L++     NA+    +   
Sbjct: 193 DIVKLLLPRGGSPH--SPAWNGYTPLHIAAKQNQV-EVARSLLQYGGSANAE----SVQG 245
Query: 756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTN 815
            T L+ AA   + +++  LL   A+ ++ +    +PL    ++G   + D L+++    +
Sbjct: 246 VTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD 305
Query: 816 LRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL 875
             T + G T LH A+ +  + ++K LL++ AD+NA+ K G    H A Q  + DIVT LL
Sbjct: 306 -ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 364
Query: 876 DAGSN 880
             G++
Sbjct: 365 KNGAS 369

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  123 bits (309), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 144/305 (47%), Gaps = 9/305 (2%)
Query: 588 SPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVN 646
           +PLH+A   G++ ++   ++     N+ N   ETPLH+A   G  E  K+LL  K   VN
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNK-AKVN 74
Query: 647 HKTKDGSTALFFACYDKRLDLVEILLEANADVNLGD-GTYTPLYTALMKDPSLDIIKMLV 705
            K KD  T L  A      ++V++LLE NA+ NL     +TPL+ A  +     ++ +L 
Sbjct: 75  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 134
Query: 706 KYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFG 765
           K  +   +T +     TPLH A+  G    +A  L+E  +A       N  T L+ A   
Sbjct: 135 KEASQACMTKKG---FTPLHVAAKYGKVR-VAELLLER-DAHPNAAGKNGLTPLHVAVHH 189
Query: 766 NNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTA 825
           NNLD++K LL  G  P        +PL  + +Q   E+  +LL+Y    N  +++ G T 
Sbjct: 190 NNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ-GVTP 248
Query: 826 LHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKAT 885
           LH AA     +++ LLL   A+ N  +K G    H   Q  +  +   L+  G  ++  T
Sbjct: 249 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 308
Query: 886 KYRMT 890
           +   T
Sbjct: 309 RMGYT 313

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPLH A  N  +E+VKLLLE GA+  A +K+  RT LH+AA    +++VKLL + GA+  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGAD-- 60
Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           VN ++  G TPLH+A R   LE+VK+LL+ GAD+N+ + +G TPL  A     LEV   L
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120
Query: 380 VNHGC 384
           +  G 
Sbjct: 121 LEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
           N RT L+ AA   +L+++K LL+AGAD +  D    +PL  + R G  E+V  LLE  AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
            N +  K+G T LH AA +  L+++KLLL+  AD+NA+DK G+   H A +  + ++V  
Sbjct: 61  VNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 119
Query: 874 LLDAGS 879
           LL+AG+
Sbjct: 120 LLEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
           G T LH AA +  L+++KLLL+  AD+NA+DK G+   H A +  + ++V  LL+AG+++
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 882 EKATKYRMT 890
               K   T
Sbjct: 62  NAKDKNGRT 70

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 97.1 bits (240), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 11/164 (6%)
Query: 252 SRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLL 311
            +R+IE       A  N + + VK L+E GA+  A + S  RT LH AA     +IVKLL
Sbjct: 5   GKRLIE-------AAENGNKDRVKDLIENGADVNASD-SDGRTPLHYAAKEGHKEIVKLL 56
Query: 312 FDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN 371
              GA+  VN ++  G TPLH A +    EIVK+L+ KGAD+N+ + DG TPL  A  + 
Sbjct: 57  ISKGAD--VNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEG 114
Query: 372 CLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKH 414
             E+   L++ G D++  + + RT L +A + GN E+V  L K 
Sbjct: 115 HKEIVKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQ 158

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
Query: 399 ASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMD 457
           A++ GN + V  L+++  ++N  D DG TPL  + K +   E+   +I  GAD+ AK  D
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAK-EGHKEIVKLLISKGADVNAKDSD 69
Query: 458 GTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
           G T LH A   G+  +V  L+ K  D+N+++  G+TP+++A K  H EI  LL+  GADV
Sbjct: 70  GRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADV 129
Query: 517 AVKMKSNFTCLHVACEFASIEMVSFLLSHIG 547
                   T L +A E  + E+V  L    G
Sbjct: 130 NTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNH 502
           +IE GAD+ A   DG T LH A   G+  +V  L+ K  D+N+++  G+TP+++A K  H
Sbjct: 23  LIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGH 82
Query: 503 LEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHC 561
            EI  LL+  GADV  K     T LH A +    E+V  L+S    VN  D+ G TPL  
Sbjct: 83  KEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDL 142
Query: 562 A 562
           A
Sbjct: 143 A 143

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 593 ACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKD 651
           A   GN D +   ++   DVN  +  G TPLH A   G  E VK L+ +K  DVN K  D
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLI-SKGADVNAKDSD 69
Query: 652 GSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGAD 710
           G T L +A  +   ++V++L+   ADVN  D    TPL+ A  K+   +I+K+L+  GAD
Sbjct: 70  GRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYA-AKEGHKEIVKLLISKGAD 128
Query: 711 VNLTNEACYYMTPLHYASYRGDCNDIARFL 740
           VN ++      TPL  A   G+  +I + L
Sbjct: 129 VNTSD--SDGRTPLDLAREHGN-EEIVKLL 155

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 743 ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYE 802
           E  AD+   + + RT L++AA   + +++K L+  GAD +  D    +PL  + ++G  E
Sbjct: 25  ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKE 84
Query: 803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
           IV  L+   AD N +    G T LH AA     +I+KLL+   AD+N  D  G+     A
Sbjct: 85  IVKLLISKGADVNAKD-SDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDLA 143
Query: 863 CQAKNWDIVTFLLDAGSNIE 882
            +  N +IV  L   G  +E
Sbjct: 144 REHGNEEIVKLLEKQGGWLE 163

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 96.7 bits (239), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 151/316 (47%), Gaps = 35/316 (11%)
Query: 253 RRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLF 312
           R  +E +  L  A+ N D++LV+ LLE GAN    E+    T LH A  +   DIV+LL 
Sbjct: 20  RAAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL 79
Query: 313 DYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNC 372
            +GA+  +  +N  G TP  +A     ++++K+ L KGAD+N  +  G T    A     
Sbjct: 80  RHGADPVLRKKN--GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 137
Query: 373 LEVFNYLVNHGCDLS-----------VPEGERTALHMASQFGNLEMVNYLLKHI--NINH 419
           ++   +L   G +++           + +G  TAL  A++ G++E++  LL  +  ++N 
Sbjct: 138 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA 197
Query: 420 QDKDGWTPLTCSIKGQASLEV---FHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNY 476
            D  G   L  ++      +V    H +++ GAD+  +   G T L LA    +L +V  
Sbjct: 198 CDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 257
Query: 477 LV--KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGA-----DVAVKMKSNFTCLHV 529
           L+  +HI+IN  +  GKT +  A++    +I  LL K GA     D+ +  + N+     
Sbjct: 258 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDH--- 314
Query: 530 ACEFASIEMVSFLLSH 545
                   +V  LLSH
Sbjct: 315 -------SLVKVLLSH 323

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 399 ASQFGNLEMVNYLLKH-ININHQDKDG-WTPLTCSIKGQASLEVFHSIIEAGADIKAKLM 456
           A Q  ++++V  LL+   N+N Q+++G WTPL  +++  +  ++   ++  GAD   +  
Sbjct: 32  AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQ-MSREDIVELLLRHGADPVLRKK 90
Query: 457 DGTTALHLACYFGNLAMVN-YLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           +G T   LA   G++ ++  +L K  D+N  +  G T    A     ++    L K GA+
Sbjct: 91  NGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 150
Query: 516 VAVKMKS----------NFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAI 563
           V ++ K+            T L  A E   +E++  LL  +G  VN  DN G   L  A+
Sbjct: 151 VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 210
Query: 564 VGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLH 623
                     L + ++D+     ++  HL    G            DVN+  + G+TPL 
Sbjct: 211 ----------LSSDDSDV-----EAITHLLLDHG-----------ADVNVRGERGKTPLI 244
Query: 624 VAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG 683
           +AV    L  V+ LL  ++I++N    DG TAL  A   K   + E+L +  A  + GD 
Sbjct: 245 LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD- 303
Query: 684 TYTPLYTALMKDPSLDIIKMLVKYGA 709
               L     ++    ++K+L+ +GA
Sbjct: 304 ----LVMTARRNYDHSLVKVLLSHGA 325

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 688 LYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNAD 747
           L    +++  +D+++ L++ GA+VN   E   + TPLH A  +    DI   L+    AD
Sbjct: 28  LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGW-TPLHNA-VQMSREDIVELLLRH-GAD 84
Query: 748 ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTL 807
             LR  N  T    AA   ++ LLK  L  GAD +  D    +  + +   G  + +  L
Sbjct: 85  PVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 144
Query: 808 LEYNADTNLRT---------IKHGSTALHTAAFHNQLDIIKLLL-KYNADINAEDKYGKI 857
            +  A+ NLR           K G+TAL  AA    ++++K+LL +  AD+NA D  G+ 
Sbjct: 145 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 204
Query: 858 AF-HSACQAKNWD---IVTFLLDAGSNI 881
           A  H+   + + D   I   LLD G+++
Sbjct: 205 ALIHALLSSDDSDVEAITHLLLDHGADV 232

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
           ++D   L+ + +    ++V  LLE  A+ N +  + G T LH A   ++ DI++LLL++ 
Sbjct: 23  VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 82
Query: 846 ADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           AD     K G   F  A  A +  ++   L  G+++ +   Y  T
Sbjct: 83  ADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFT 127

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 252 SRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLL 311
            +R+IE       A  N + + VK LLE GA+P A + S  RT LH AA     +IVKLL
Sbjct: 5   GKRLIE-------AAENGNKDRVKDLLENGADPNASD-SDGRTPLHYAAENGHKEIVKLL 56
Query: 312 FDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN 371
              GA+   N ++  G TPLH A      EIVK+LL KGAD N+ + DG TPL  A    
Sbjct: 57  LSKGAD--PNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENG 114
Query: 372 CLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKH 414
             E+   L++ G D +  + + RT L +A + GN E+V  L K 
Sbjct: 115 HKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQ 158

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNH 502
           ++E GAD  A   DG T LH A   G+  +V  L+ K  D N+++  G+TP+++A +N H
Sbjct: 23  LLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGH 82
Query: 503 LEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHC 561
            EI  LLL  GAD   K     T LH A E    E+V  LLS     N  D+ G TPL  
Sbjct: 83  KEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDL 142
Query: 562 A 562
           A
Sbjct: 143 A 143

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 743 ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYE 802
           E  AD    + + RT L++AA   + +++K LL  GADP+  D    +PL  +   G  E
Sbjct: 25  ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKE 84
Query: 803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
           IV  LL   AD N +    G T LH AA +   +I+KLLL   AD N  D  G+     A
Sbjct: 85  IVKLLLSKGADPNAKD-SDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLA 143
Query: 863 CQAKNWDIVTFLLDAGSNIE 882
            +  N +IV  L   G  +E
Sbjct: 144 REHGNEEIVKLLEKQGGWLE 163

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+   +    T L+ AA   +L++++ LLK GAD + LD  
Sbjct: 21  AARAGQDDEVRILMAN-GADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFS 79
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLR-TIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
            ++PL  + ++G  EIV+ LL+Y AD N   TI  GST LH AA    L+I+++LLKY A
Sbjct: 80  GSTPLHLAAKRGHLEIVEVLLKYGADVNADDTI--GSTPLHLAADTGHLEIVEVLLKYGA 137
Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFL 874
           D+NA+DK+GK AF  +    N D+   L
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 138/277 (49%), Gaps = 20/277 (7%)
Query: 256 IETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYG 315
           +E +  L  A+ N D++LV+ LLE GAN    E+    T LH A  +   DIV+LL  +G
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62
Query: 316 AEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
           A+  +  +N  G TP  +A     ++++K+ L KGAD+N  +  G T    A     ++ 
Sbjct: 63  ADPVLRKKN--GATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120
Query: 376 FNYLVNHGCDLS-----------VPEGERTALHMASQFGNLEMVNYLLKHI--NINHQDK 422
             +L   G +++           + +G  TAL  A++ G++E++  LL  +  ++N  D 
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN 180
Query: 423 DGWTPLTCSIKGQASLEV---FHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV- 478
            G   L  ++      +V    H +++ GAD+  +   G T L LA    +L +V  L+ 
Sbjct: 181 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240
Query: 479 -KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGA 514
            +HI+IN  +  GKT +  A++    +I  LL K GA
Sbjct: 241 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 137/299 (45%), Gaps = 42/299 (14%)
Query: 399 ASQFGNLEMVNYLLKH-ININHQDKDG-WTPLTCSIKGQASLEVFHSIIEAGADIKAKLM 456
           A Q  ++++V  LL+   N+N Q+++G WTPL  +++  +  ++   ++  GAD   +  
Sbjct: 12  AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQ-MSREDIVELLLRHGADPVLRKK 70
Query: 457 DGTTALHLACYFGNLAMVN-YLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           +G T   LA   G++ ++  +L K  D+N  +  G T    A     ++    L K GA+
Sbjct: 71  NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130
Query: 516 VAVKMKS----------NFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAI 563
           V ++ K+            T L  A E   +E++  LL  +G  VN  DN G   L  A+
Sbjct: 131 VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190
Query: 564 VGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLH 623
                     L + ++D+     ++  HL    G            DVN+  + G+TPL 
Sbjct: 191 ----------LSSDDSDV-----EAITHLLLDHGA-----------DVNVRGERGKTPLI 224
Query: 624 VAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGD 682
           +AV    L  V+ LL  ++I++N    DG TAL  A   K   + E+L +  A  + GD
Sbjct: 225 LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 693 MKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRN 752
           +++  +D+++ L++ GA+VN   E   + TPLH A  +    DI   L+    AD  LR 
Sbjct: 13  VQNEDVDLVQQLLEGGANVNFQEEEGGW-TPLHNA-VQMSREDIVELLLRH-GADPVLRK 69
Query: 753 FNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNA 812
            N  T    AA   ++ LLK  L  GAD +  D    +  + +   G  + +  L +  A
Sbjct: 70  KNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGA 129
Query: 813 DTNLRT---------IKHGSTALHTAAFHNQLDIIKLLL-KYNADINAEDKYGKIAF-HS 861
           + NLR           K G+TAL  AA    ++++K+LL +  AD+NA D  G+ A  H+
Sbjct: 130 NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA 189
Query: 862 ACQAKNWD---IVTFLLDAGSNI 881
              + + D   I   LLD G+++
Sbjct: 190 LLSSDDSDVEAITHLLLDHGADV 212

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
           ++D   L+ + +    ++V  LLE  A+ N +  + G T LH A   ++ DI++LLL++ 
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62
Query: 846 ADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKL- 904
           AD     K G   F  A  A +  ++   L  G+++ +   Y  T      V   V  L 
Sbjct: 63  ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALK 122
Query: 905 ----RAANI 909
               R AN+
Sbjct: 123 FLYKRGANV 131

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 92.8 bits (229), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+   +    T L+ AA   +L++++ LLK GAD D  D+ 
Sbjct: 21  AARAGQDDEVRILIAN-GADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVY 79
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
             +PL  +   G  EIV+ LL+Y AD N   +  GST LH AA    L+I+++LLKY AD
Sbjct: 80  GFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMT-GSTPLHLAADEGHLEIVEVLLKYGAD 138
Query: 848 INAEDKYGKIAFHSACQAKNWDI 870
           +NA+DK+GK AF  +    N D+
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDL 161

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+  ++ +  T L+ AA   +L++++ LLKAGAD +  D  
Sbjct: 9   AARAGQDDEVRILMAN-GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD 67
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
             +PL  + R+G  EIV+ LL+  AD N +  K G T LH AA    L+I+++LLK  AD
Sbjct: 68  GYTPLHLAAREGHLEIVEVLLKAGADVNAKD-KDGYTPLHLAAREGHLEIVEVLLKAGAD 126
Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFL 874
           +NA+DK+GK  F  A    N DI   L
Sbjct: 127 VNAQDKFGKTPFDLAIDNGNEDIAEVL 153

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+  ++ +  T L+ AA   +L++++ LLKAGAD +  D  
Sbjct: 21  AARAGQDDEVRILMAN-GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD 79
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
             +PL  + R+G  EIV+ LL+  AD N +  K G T LH AA    L+I+++LLK  AD
Sbjct: 80  GYTPLHLAAREGHLEIVEVLLKAGADVNAKD-KDGYTPLHLAAREGHLEIVEVLLKAGAD 138
Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFL 874
           +NA+DK+GK AF  +    N D+   L
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+  ++ +  T L+ AA   +L++++ LLKAGAD +  D  
Sbjct: 9   AARAGQDDEVRILMAN-GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD 67
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
             +PL  + R+G  EIV+ LL+  AD N +  K G T LH AA    L+I+++LLK  AD
Sbjct: 68  GYTPLHLAAREGHLEIVEVLLKAGADVNAKD-KDGYTPLHLAAREGHLEIVEVLLKAGAD 126
Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFL 874
           +NA+DK+GK  F  A +  + DI   L
Sbjct: 127 VNAQDKFGKTPFDLAIREGHEDIAEVL 153

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
           AA     D ++ L+  GAD +  D    +PL  + R+G  EIV+ LL+  AD N +  K 
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD-KD 67
Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
           G T LH AA    L+I+++LLK  AD+NA+DK G    H A +  + +IV  LL AG+++
Sbjct: 68  GYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADV 127
Query: 882 EKATKYRMTFESSKVVEKH 900
               K+  T     + E H
Sbjct: 128 NAQDKFGKTPFDLAIREGH 146

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
Query: 252 SRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLL 311
            +R+IE       A  N + + VK L+E GA+  A + S  RT LH AA     ++VKLL
Sbjct: 5   GKRLIE-------AAENGNKDRVKDLIENGADVNASD-SDGRTPLHHAAENGHKEVVKLL 56
Query: 312 FDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN 371
              GA+  VN ++  G TPLH A      E+VK+L+ KGAD+N+ + DG TPL  A    
Sbjct: 57  ISKGAD--VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 114
Query: 372 CLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLK 413
             EV   L++ G D++  + + RT L +A + GN E+V  L K
Sbjct: 115 HKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 83.2 bits (204), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNH 502
           +IE GAD+ A   DG T LH A   G+  +V  L+ K  D+N+++  G+TP++ A +N H
Sbjct: 23  LIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 82
Query: 503 LEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHC 561
            E+  LL+  GADV  K     T LH A E    E+V  L+S    VN  D+ G TPL  
Sbjct: 83  KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDL 142
Query: 562 A 562
           A
Sbjct: 143 A 143

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 487 NDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH- 545
           ++LGK  I  A   N   + +L+ + GADV        T LH A E    E+V  L+S  
Sbjct: 2   SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKG 60
Query: 546 IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMIT 603
             VN +D+ G TPLH A      EV   LI+  AD+    +D  +PLH A   G+ +++ 
Sbjct: 61  ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVK 120
Query: 604 YAM-KYFDVNIENDIGETPLHVAVSHGCLEAVKFL 637
             + K  DVN  +  G TPL +A  HG  E VK L
Sbjct: 121 LLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLL 155

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 593 ACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKD 651
           A   GN D +   ++   DVN  +  G TPLH A  +G  E VK L+ +K  DVN K  D
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSD 69
Query: 652 GSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGAD 710
           G T L  A  +   ++V++L+   ADVN  D    TPL+ A  ++   +++K+L+  GAD
Sbjct: 70  GRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHA-AENGHKEVVKLLISKGAD 128
Query: 711 VNLTNEACYYMTPLHYASYRGD 732
           VN ++      TPL  A   G+
Sbjct: 129 VNTSD--SDGRTPLDLAREHGN 148

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 743 ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYE 802
           E  AD+   + + RT L+ AA   + +++K L+  GAD +  D    +PL  +   G  E
Sbjct: 25  ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84
Query: 803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
           +V  L+   AD N +    G T LH AA +   +++KLL+   AD+N  D  G+     A
Sbjct: 85  VVKLLISKGADVNAKDSD-GRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLA 143
Query: 863 CQAKNWDIVTFLLDAGSNIE 882
            +  N ++V  L   G  +E
Sbjct: 144 REHGNEEVVKLLEKQGGWLE 163

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
           R   +D  R L+    AD+  R+F   T L+ AA   +L++++ LLK GAD +  D    
Sbjct: 23  RAGQDDEVRILMAN-GADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGV 81
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  + R+G  EIV+ LL+  AD N  +  HG T LH AA    L+I+++LLK  AD+N
Sbjct: 82  TPLHLAARRGHLEIVEVLLKNGADVN-ASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFL 874
           A+DK+GK AF  +    N D+   L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
Query: 306 DIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLF 365
           D V++L   GA+  VN  + +GLTPLH+A     LEIV++LL  GAD+N+ +  G TPL 
Sbjct: 28  DEVRILMANGAD--VNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLH 85
Query: 366 CAIAQNCLEVFNYLVNHGCDL-SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKD 423
            A     LE+   L+ HG D+ +V     T LH+A+  G+LE+V  LLKH  ++N QDK 
Sbjct: 86  LAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKF 145
Query: 424 GWTPLTCSI 432
           G T    SI
Sbjct: 146 GKTAFDISI 154

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+   + +  T L+ AA   +L++++ LLK GAD + +D+ 
Sbjct: 21  AARAGQDDEVRILMAN-GADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIX 79
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
            ++PL  +   G  EIV+ LL++ AD N      G T LH AA    L+I+++LLK+ AD
Sbjct: 80  GSTPLHLAALIGHLEIVEVLLKHGADVN-AVDTWGDTPLHLAAIMGHLEIVEVLLKHGAD 138
Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFL 874
           +NA+DK+GK AF  +    N D+   L
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 116/216 (53%), Gaps = 11/216 (5%)
Query: 390 EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
           + +R+ LH A++ G++++ + L++   NI+   +D  TPL  + +    LE    +I+AG
Sbjct: 9   QNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENN-HLEAVKYLIKAG 67
Query: 449 ADIKAKLMDGTTALHLACYFGNLAMVNYLVK--HIDINSENDLGKTPIYFAIKNNHLEIF 506
           A +  K  +G+T LHLA   G+  +V YL+    +D+N ++D G TP+ +A +  H+++ 
Sbjct: 68  ALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLV 127
Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHI----GVNLQDNKGCTPLHCA 562
            LLL  G+D+ ++      CLH A     +++   LL+       VN+    G +PLH A
Sbjct: 128 KLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIH---GDSPLHIA 184
Query: 563 IVGNQLEVFNHLINSNADITMYKNDSPLHLACATGN 598
              N+ +     ++ ++D+T+   +    L CA+ N
Sbjct: 185 ARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLN 220

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 87.0 bits (214), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 114/215 (53%), Gaps = 13/215 (6%)
Query: 460 TALHLACYFGNLAMVNYLVK---HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
           + LH A   G++ + + LV+   +ID  SE+   +TP+  A +NNHLE    L+K GA V
Sbjct: 13  SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQ--RTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 517 AVKMKSNFTCLHVACEFASIEMVSFLLS--HIGVNLQDNKGCTPLHCAIVGNQLEVFNHL 574
             K     TCLH+A +    E+V +LLS   + VN QD+ G TP+  A     +++   L
Sbjct: 71  DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130
Query: 575 INSNADITMYKNDSP--LHLACATGNMDM--ITYAMKYFDVNIENDIGETPLHVAVSHGC 630
           ++  +DI +  N+    LH A  +G +D+  I  A K  D++  N  G++PLH+A     
Sbjct: 131 LSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK-CDLHAVNIHGDSPLHIAARENR 189
Query: 631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRL 665
            + V   L +++ DV  K K+G T L  A  + ++
Sbjct: 190 YDCVVLFL-SRDSDVTLKNKEGETPLQCASLNSQV 223

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 11/229 (4%)
Query: 545 HIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMI 602
           H+   ++     +PLH A     +++ + L+ + A+I     D  +PL  A    +++ +
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAV 60
Query: 603 TYAMKYFD-VNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACY 661
            Y +K    V+ ++  G T LH+A   G  E V++LL+   +DVN +   G T + +A  
Sbjct: 61  KYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATE 120
Query: 662 DKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYM 721
            K +DLV++LL   +D+N+ D               +DI ++L+    D++  N   +  
Sbjct: 121 YKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVN--IHGD 178
Query: 722 TPLHYASY--RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNL 768
           +PLH A+   R DC  +  FL  +  +D+TL+N    T L  A+  + +
Sbjct: 179 SPLHIAARENRYDC--VVLFLSRD--SDVTLKNKEGETPLQCASLNSQV 223

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 47/253 (18%)
Query: 588 SPLHLACATGNMD---MITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNID 644
           SPLH A   G++D   M+  A    D   E+    TPL  A  +  LEAVK+L+    + 
Sbjct: 13  SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQ--RTPLMEAAENNHLEAVKYLIKAGAL- 69
Query: 645 VNHKTKDGSTALFFACYDKRLDLVEILLE-ANADVNL-GDGTYTPLYTALMKDPSLDIIK 702
           V+ K  +GST L  A      ++V+ LL     DVN   DG +TP+  A  +   +D++K
Sbjct: 70  VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWA-TEYKHVDLVK 128
Query: 703 MLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFA 762
           +L+  G+D+N+                                     R+      L++A
Sbjct: 129 LLLSKGSDINI-------------------------------------RDNEENICLHWA 151
Query: 763 AFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHG 822
           AF   +D+ + LL A  D   +++   SPL  + R+  Y+ V   L  ++D  L+  K G
Sbjct: 152 AFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKN-KEG 210
Query: 823 STALHTAAFHNQL 835
            T L  A+ ++Q+
Sbjct: 211 ETPLQCASLNSQV 223

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 8/222 (3%)
Query: 642 NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDI 700
           N  + H+ K   + L  A     +D+  +L++A A+++   +   TPL  A  ++  L+ 
Sbjct: 3   NFKMEHQNK--RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEA-AENNHLEA 59
Query: 701 IKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALN 760
           +K L+K GA V+  +      T LH A+ +G   ++ ++L+     D+  ++    T + 
Sbjct: 60  VKYLIKAGALVDPKDAE--GSTCLHLAAKKGH-YEVVQYLLSNGQMDVNCQDDGGWTPMI 116
Query: 761 FAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIK 820
           +A    ++DL+K LL  G+D +I D ++   L  +   G  +I + LL    D +   I 
Sbjct: 117 WATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNI- 175
Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
           HG + LH AA  N+ D + L L  ++D+  ++K G+     A
Sbjct: 176 HGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCA 217

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
Query: 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
           +PLH A+  G   DI   LV+   A+I   + + RT L  AA  N+L+ +K+L+KAGA  
Sbjct: 13  SPLHAAAEAGHV-DICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNA-DTNLRTIKHGSTALHTAAFHNQLDIIKL 840
           D  D + ++ L  + ++G YE+V  LL     D N +    G T +  A  +  +D++KL
Sbjct: 71  DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQD-DGGWTPMIWATEYKHVDLVKL 129
Query: 841 LLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
           LL   +DIN  D    I  H A  +   DI   LL A  ++
Sbjct: 130 LLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDL 170

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
Query: 306 DIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLF 365
           D V++L   GA+  VN  + +GLTPLH+A     LEIV++LL  GAD+N+ +  G TPL 
Sbjct: 28  DEVRILMANGAD--VNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLH 85
Query: 366 CAIAQNCLEVFNYLVNHGCDL-SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKD 423
            A     LE+   L+ HG D+ +V     T LH+A+  G+LE+V  LLKH  ++N QDK 
Sbjct: 86  LAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKF 145
Query: 424 GWTPLTCSI 432
           G T    SI
Sbjct: 146 GKTAFDISI 154

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+   + +  T L+ AA   +L++++ LLK GAD + +D+ 
Sbjct: 21  AARAGQDDEVRILMAN-GADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIM 79
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
            ++PL  +   G  EIV+ LL++ AD N      G T LH AA    L+I+++LLK+ AD
Sbjct: 80  GSTPLHLAALIGHLEIVEVLLKHGADVN-AVDTWGDTPLHLAAIMGHLEIVEVLLKHGAD 138
Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFL 874
           +NA+DK+GK AF  +    N D+   L
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 89.7 bits (221), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           +RTALH A      +IV+ L   G    VN ++ AG +PLHIA      EIVK LL KGA
Sbjct: 41  SRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 98
Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG-ERTALHMASQFGNLEMVNY 410
            +N+ N +GCTPL  A ++N  E+   L+  G +    +  E TA+H A+  GNL+M++ 
Sbjct: 99  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHI 158
Query: 411 LLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFG 469
           LL +  + N QD +G TPL  +   +  +E    ++  GA I  +  +  T L +A   G
Sbjct: 159 LLYYKASTNIQDTEGNTPLHLACD-EERVEEAKLLVSQGASIYIENKEEKTPLQVA--KG 215
Query: 470 NLAMV 474
            L ++
Sbjct: 216 GLGLI 220

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 37/217 (17%)
Query: 393 RTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
           RTALH A   G+ E+V +LL+  + +N +D  GW+PL                       
Sbjct: 42  RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPL----------------------- 78
Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
                      H+A   G   +V  L+ K   +N+ N  G TP+++A   N  EI  +LL
Sbjct: 79  -----------HIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 127
Query: 511 KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLE 569
           + GA+   K     T +H A    +++M+  LL +    N+QD +G TPLH A    ++E
Sbjct: 128 EGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVE 187
Query: 570 VFNHLINSNADITMYKNDSPLHLACATGNMDMITYAM 606
               L++  A I +   +    L  A G + +I   M
Sbjct: 188 EAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRM 224

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 491 KTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VN 549
           +T +++A    H EI   LL+LG  V  K  + ++ LH+A      E+V  LL     VN
Sbjct: 42  RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVN 101
Query: 550 LQDNKGCTPLHCAIVGNQLEVFNHLI--NSNADITMYKNDSPLHLACATGNMDMITYAMK 607
             +  GCTPLH A   N+ E+   L+   +N D   +   + +H A A GN+ MI   + 
Sbjct: 102 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLY 161
Query: 608 Y-FDVNIENDIGETPLHVAVSHGCLEAVKFLLN 639
           Y    NI++  G TPLH+A     +E  K L++
Sbjct: 162 YKASTNIQDTEGNTPLHLACDEERVEEAKLLVS 194

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 8/189 (4%)
Query: 588 SPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVN 646
           + LH AC+ G+ +++ + ++    VN ++D G +PLH+A S G  E VK LL  K   VN
Sbjct: 43  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLG-KGAQVN 101
Query: 647 HKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLV 705
              ++G T L +A    R ++  +LLE  A+ +  D    T ++ A  K  +L +I +L+
Sbjct: 102 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKG-NLKMIHILL 160
Query: 706 KYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFG 765
            Y A  N+ +      TPLH A       + A+ LV +  A I + N   +T L  A  G
Sbjct: 161 YYKASTNIQDTEGN--TPLHLACDEERVEE-AKLLVSQ-GASIYIENKEEKTPLQVAKGG 216
Query: 766 NNLDLLKFL 774
             L L + +
Sbjct: 217 LGLILKRMV 225

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 42/215 (19%)
Query: 650 KDGSTALFFACYDKRLDLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDIIKMLVKYG 708
           +D  TAL +AC     ++VE LL+    VN   D  ++PL+ A       +I+K L+  G
Sbjct: 39  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRD-EIVKALLGKG 97
Query: 709 ADVNLTNE-ACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN 767
           A VN  N+  C   TPLHYA+ +                                   N 
Sbjct: 98  AQVNAVNQNGC---TPLHYAASK-----------------------------------NR 119
Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
            ++   LL+ GA+PD  D  + + +  +  +G  +++  LL Y A TN++  + G+T LH
Sbjct: 120 HEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTE-GNTPLH 178
Query: 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
            A    +++  KLL+   A I  E+K  K     A
Sbjct: 179 LACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 749 TLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLL 808
           T  + ++RTAL++A    + ++++FLL+ G   +  D    SPL  +   G  EIV  LL
Sbjct: 35  TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALL 94
Query: 809 EYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW 868
              A  N    ++G T LH AA  N+ +I  +LL+  A+ +A+D Y   A H A    N 
Sbjct: 95  GKGAQVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNL 153
Query: 869 DIVTFLL--DAGSNI---EKATKYRMTFESSKVVEKHVAKLRAANIYVD 912
            ++  LL   A +NI   E  T   +  +  +V E  +   + A+IY++
Sbjct: 154 KMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIE 202

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 89.7 bits (221), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
           R   +D  R L+    AD    +   RT L+ AA   +L++++ LL+ GAD + +D   T
Sbjct: 11  RAGQDDEVRILMAN-GADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGT 69
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  +   G  EIV+ LL+Y AD N +    G T L+ AA+   L+I+++LLK+ AD+N
Sbjct: 70  TPLHLAASLGHLEIVEVLLKYGADVNAKDAT-GITPLYLAAYWGHLEIVEVLLKHGADVN 128
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFL 874
           A+DK+GK AF  +    N D+   L
Sbjct: 129 AQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 89.7 bits (221), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           +RTALH A      +IV+ L   G    VN ++ AG +PLHIA      EIVK LL KGA
Sbjct: 40  SRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 97
Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG-ERTALHMASQFGNLEMVNY 410
            +N+ N +GCTPL  A ++N  E+   L+  G +    +  E TA+H A+  GNL+M++ 
Sbjct: 98  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHI 157
Query: 411 LLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFG 469
           LL +  + N QD +G TPL  +   +  +E    ++  GA I  +  +  T L +A   G
Sbjct: 158 LLYYKASTNIQDTEGNTPLHLACD-EERVEEAKLLVSQGASIYIENKEEKTPLQVA--KG 214
Query: 470 NLAMV 474
            L ++
Sbjct: 215 GLGLI 219

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 37/217 (17%)
Query: 393 RTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
           RTALH A   G+ E+V +LL+  + +N +D  GW+PL                       
Sbjct: 41  RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPL----------------------- 77
Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
                      H+A   G   +V  L+ K   +N+ N  G TP+++A   N  EI  +LL
Sbjct: 78  -----------HIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 126
Query: 511 KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLE 569
           + GA+   K     T +H A    +++M+  LL +    N+QD +G TPLH A    ++E
Sbjct: 127 EGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVE 186
Query: 570 VFNHLINSNADITMYKNDSPLHLACATGNMDMITYAM 606
               L++  A I +   +    L  A G + +I   M
Sbjct: 187 EAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRM 223

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 491 KTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VN 549
           +T +++A    H EI   LL+LG  V  K  + ++ LH+A      E+V  LL     VN
Sbjct: 41  RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVN 100
Query: 550 LQDNKGCTPLHCAIVGNQLEVFNHLI--NSNADITMYKNDSPLHLACATGNMDMITYAMK 607
             +  GCTPLH A   N+ E+   L+   +N D   +   + +H A A GN+ MI   + 
Sbjct: 101 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLY 160
Query: 608 Y-FDVNIENDIGETPLHVAVSHGCLEAVKFLLN 639
           Y    NI++  G TPLH+A     +E  K L++
Sbjct: 161 YKASTNIQDTEGNTPLHLACDEERVEEAKLLVS 193

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 42/215 (19%)
Query: 650 KDGSTALFFACYDKRLDLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDIIKMLVKYG 708
           +D  TAL +AC     ++VE LL+    VN   D  ++PL+ A       +I+K L+  G
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRD-EIVKALLGKG 96
Query: 709 ADVNLTNE-ACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN 767
           A VN  N+  C   TPLHYA+ +                                   N 
Sbjct: 97  AQVNAVNQNGC---TPLHYAASK-----------------------------------NR 118
Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
            ++   LL+ GA+PD  D  + + +  +  +G  +++  LL Y A TN++  + G+T LH
Sbjct: 119 HEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTE-GNTPLH 177
Query: 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
            A    +++  KLL+   A I  E+K  K     A
Sbjct: 178 LACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 212

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 749 TLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLL 808
           T  + ++RTAL++A    + ++++FLL+ G   +  D    SPL  +   G  EIV  LL
Sbjct: 34  TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALL 93
Query: 809 EYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW 868
              A  N    ++G T LH AA  N+ +I  +LL+  A+ +A+D Y   A H A    N 
Sbjct: 94  GKGAQVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNL 152
Query: 869 DIVTFLL--DAGSNI---EKATKYRMTFESSKVVEKHVAKLRAANIYVD 912
            ++  LL   A +NI   E  T   +  +  +V E  +   + A+IY++
Sbjct: 153 KMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIE 201

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
           R   +D  R L+    AD+   ++   T L+ AA   +L++++ LLK GAD +  D    
Sbjct: 23  RAGQDDEVRILMAN-GADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGA 81
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  +   G  EIV+ LL++ AD N +  + G T LH AA+   L+I+++LLKY AD+N
Sbjct: 82  TPLHLAADNGHLEIVEVLLKHGADVNAKDYE-GFTPLHLAAYDGHLEIVEVLLKYGADVN 140
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFL 874
           A+DK+GK AF  +    N D+   L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           LL + R G  + V  L+   AD N  T   G T LH AA    L+I+++LLKY AD+NA 
Sbjct: 18  LLEAARAGQDDEVRILMANGADVN-ATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAW 76
Query: 852 DKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
           D YG    H A    + +IV  LL  G+++
Sbjct: 77  DNYGATPLHLAADNGHLEIVEVLLKHGADV 106

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 216 KALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVK 275
           K L  A +    D  K L++ G  +N  D            +  TPLH A  N   E+VK
Sbjct: 6   KRLIEAAENGNKDRVKDLLENGADVNASDS-----------DGKTPLHLAAENGHKEVVK 54
Query: 276 LLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIAC 335
           LLL +GA+P A + S  +T LH+AA     ++VKLL   GA+   N ++  G TPLH+A 
Sbjct: 55  LLLSQGADPNAKD-SDGKTPLHLAAENGHKEVVKLLLSQGADP--NAKDSDGKTPLHLAA 111
Query: 336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGC 384
                E+VK+LL +GAD N+ + DG TPL  A      EV   L   G 
Sbjct: 112 ENGHKEVVKLLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 306 DIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLF 365
           D VK L + GA+  VN  +  G TPLH+A      E+VK+LL +GAD N+ + DG TPL 
Sbjct: 18  DRVKDLLENGAD--VNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLH 75
Query: 366 CAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKH-ININHQDKD 423
            A      EV   L++ G D +  + + +T LH+A++ G+ E+V  LL    + N  D D
Sbjct: 76  LAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSDSD 135
Query: 424 GWTPL 428
           G TPL
Sbjct: 136 GRTPL 140

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 399 ASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMD 457
           A++ GN + V  LL++  ++N  D DG TPL  + +     EV   ++  GAD  AK  D
Sbjct: 11  AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAE-NGHKEVVKLLLSQGADPNAKDSD 69
Query: 458 GTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
           G T LHLA   G+  +V  L+    D N+++  GKTP++ A +N H E+  LLL  GAD 
Sbjct: 70  GKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADP 129
Query: 517 AVKMKSNFTCLHVACEFASIEMVSFLLSHIG 547
                   T L +A E  + E+V  L    G
Sbjct: 130 NTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 465 ACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSN 523
           A   GN   V  L+++  D+N+ +  GKTP++ A +N H E+  LLL  GAD   K    
Sbjct: 11  AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDG 70
Query: 524 FTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADIT 582
            T LH+A E    E+V  LLS     N +D+ G TPLH A      EV   L++  AD  
Sbjct: 71  KTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPN 130
Query: 583 MYKND--SPLHLACATGNMDMI 602
              +D  +PL LA   GN +++
Sbjct: 131 TSDSDGRTPLDLAREHGNEEVV 152

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           A+  G+ + +   L  E  AD+   + + +T L+ AA   + +++K LL  GADP+  D 
Sbjct: 11  AAENGNKDRVKDLL--ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDS 68
Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
              +PL  +   G  E+V  LL   AD N +    G T LH AA +   +++KLLL   A
Sbjct: 69  DGKTPLHLAAENGHKEVVKLLLSQGADPNAKD-SDGKTPLHLAAENGHKEVVKLLLSQGA 127
Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882
           D N  D  G+     A +  N ++V  L   G  +E
Sbjct: 128 DPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIF 506
           GAD+ A    G T LHLA YFG+L +V  L+K+  D+N+++ LG TP++ A    HLE+ 
Sbjct: 37  GADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAADRGHLEVV 96
Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAI 563
            +LLK GADV     + FT LH+A     +E+V  LL H   VN QD  G T    +I
Sbjct: 97  EVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTAFDISI 154

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+   +    T L+ AA+  +L++++ LLK GAD +  D  
Sbjct: 21  AARAGQDDEVRILMANG-ADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSL 79
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
             +PL  +  +G  E+V+ LL+  AD N     +G T LH AA    L+I+++LLK+ AD
Sbjct: 80  GVTPLHLAADRGHLEVVEVLLKNGADVNAND-HNGFTPLHLAANIGHLEIVEVLLKHGAD 138
Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFL 874
           +NA+DK+GK AF  +    N D+   L
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           LL + R G  + V  L+   AD N  +   G T LH AA+   L+I+++LLK  AD+NA+
Sbjct: 18  LLEAARAGQDDEVRILMANGADVN-ASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNAD 76
Query: 852 DKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
           D  G    H A    + ++V  LL  G+++
Sbjct: 77  DSLGVTPLHLAADRGHLEVVEVLLKNGADV 106

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/158 (34%), Positives = 94/158 (59%), Gaps = 5/158 (3%)
Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPLH A++ +   +V+LL+  GA+P+A+++   +TA H+A    S   ++ L D  A  +
Sbjct: 48  TPLHLAVITTLPSVVRLLVTAGASPMALDR-HGQTAAHLACEHRSPTCLRALLDSAAPGT 106
Query: 320 VNVQ--NVAGLTPLHIACRRKCLEIVKILLDKGADINSGN-DDGCTPLFCAIAQNCLEVF 376
           ++++  N  GLT LH+A   +C E V++LL++GADI++ +   G +PL  A+  N L + 
Sbjct: 107 LDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV 166
Query: 377 NYLVNHGCDLSVPE-GERTALHMASQFGNLEMVNYLLK 413
             L+ HG +++       +ALH AS  G L +V  L++
Sbjct: 167 QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVR 204

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 21/235 (8%)
Query: 552 DNKGCTPLHCAIVGNQLEVFNHLIN----SNADITMYKN--DSPLHLACATGNMDMITYA 605
           D  G TPLH A+V   L   + L+N       ++ +Y N   +PLHLA  T    ++   
Sbjct: 6   DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65
Query: 606 MKYFDVNIENDI-GETPLHVAVSHGCLEAVKFLLNTK---NIDVNHKTKDGSTALFFACY 661
           +      +  D  G+T  H+A  H     ++ LL++     +D+  +  DG TAL  A  
Sbjct: 66  VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 125
Query: 662 DKRLDLVEILLEANADVNLGD--GTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACY 719
            +  + V++LLE  AD++  D     +PL  A+ ++ SL ++++L+++GA+VN    A  
Sbjct: 126 TECQETVQLLLERGADIDAVDIKSGRSPLIHAV-ENNSLSMVQLLLQHGANVN----AQM 180
Query: 720 Y--MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLK 772
           Y   + LH AS RG    + R LV    AD +L+N +N T L  A     +D+L+
Sbjct: 181 YSGSSALHSASGRG-LLPLVRTLVRS-GADSSLKNCHNDTPLMVARSRRVIDILR 233

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 45/261 (17%)
Query: 587 DSPLHLACATGNMDMITYAMKYF-----DVNIENDIGETPLHVAVSHGCLEAVKFLLNTK 641
           D+PLH+A   GN+  +   +  F     +++I N++ +TPLH+AV    L +V  LL T 
Sbjct: 10  DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVI-TTLPSVVRLLVTA 68
Query: 642 NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDII 701
                   + G TA   AC  +    +  LL++ A      GT             LD+ 
Sbjct: 69  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAP-----GT-------------LDL- 109
Query: 702 KMLVKYGADVNLTNEACYY--MTPLHYASYRGDCNDIARFLVEECNADITLRNFNN-RTA 758
                         EA  Y  +T LH A    +C +  + L+E   ADI   +  + R+ 
Sbjct: 110 --------------EARNYDGLTALHVA-VNTECQETVQLLLER-GADIDAVDIKSGRSP 153
Query: 759 LNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRT 818
           L  A   N+L +++ LL+ GA+ +      +S L S+  +GL  +V TL+   AD++L+ 
Sbjct: 154 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 213
Query: 819 IKHGSTALHTAAFHNQLDIIK 839
             H  T L  A     +DI++
Sbjct: 214 C-HNDTPLMVARSRRVIDILR 233

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 686 TPLYTALMKD--PSLD-IIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE 742
           TPL+ A+++   P++  ++ +  + G ++++ N      TPLH A        + R LV 
Sbjct: 11  TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNN--LRQTPLHLAVIT-TLPSVVRLLVT 67
Query: 743 ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK-----DTSPLLSSCR 797
              + + L + + +TA + A    +   L+ LL + A P  LDL+       + L  +  
Sbjct: 68  AGASPMAL-DRHGQTAAHLACEHRSPTCLRALLDSAA-PGTLDLEARNYDGLTALHVAVN 125
Query: 798 QGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKI 857
               E V  LLE  AD +   IK G + L  A  +N L +++LLL++ A++NA+   G  
Sbjct: 126 TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSS 185
Query: 858 AFHSACQAKNWDIVTFLLDAGSN 880
           A HSA       +V  L+ +G++
Sbjct: 186 ALHSASGRGLLPLVRTLVRSGAD 208

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+   + + +T L+ AA   +L++++ LLK GAD +  D  
Sbjct: 21  AARAGQDDEVRILMAN-GADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKM 79
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
             +PL  +   G  EIV+ LL+  AD N  T  +G T LH AA    L+I+++LLKY AD
Sbjct: 80  GDTPLHLAALYGHLEIVEVLLKNGADVN-ATDTYGFTPLHLAADAGHLEIVEVLLKYGAD 138
Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFL 874
           +NA+DK+GK AF  +    N D+   L
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+   + +  T L+ AA   +L++++ LLK GAD +  DL 
Sbjct: 21  AARAGQDDEVRILMAN-GADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLT 79
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
             +PL  +   G  EIV+ LL++ AD N      G T LH AA +  L+I+++LLK+ AD
Sbjct: 80  GITPLHLAAATGHLEIVEVLLKHGADVNAYD-NDGHTPLHLAAKYGHLEIVEVLLKHGAD 138
Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFL 874
           +NA+DK+GK AF  +    N D+   L
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 87.0 bits (214), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           +RTALH A      +IV+ L   G    VN ++ AG +PLHIA      EIVK LL KGA
Sbjct: 40  SRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSPLHIAASAGXDEIVKALLVKGA 97
Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG-ERTALHMASQFGNLEMVNY 410
            +N+ N +GCTPL  A ++N  E+   L+  G +    +  + TA+H A+  GNL+MV+ 
Sbjct: 98  HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157
Query: 411 LLKH-ININHQDKDGWTPL 428
           LL +  + N QD +G TPL
Sbjct: 158 LLFYKASTNIQDTEGNTPL 176

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 393 RTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
           RTALH A   G+ E+V +LL+  + +N +D  GW+PL             H    AG D 
Sbjct: 41  RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPL-------------HIAASAGXDE 87
Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
             K +                    LVK   +N+ N  G TP+++A   N  EI  +LL+
Sbjct: 88  IVKAL--------------------LVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE 127
Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEV 570
            GA+   K   + T +H A    +++MV  LL +    N+QD +G TPLH A    ++E 
Sbjct: 128 GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEE 187
Query: 571 FNHLINSNADITMYKNDSPLHLACATGNMDMI 602
              L+   A I +   +    L  A G + +I
Sbjct: 188 AKFLVTQGASIYIENKEEKTPLQVAKGGLGLI 219

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Query: 491 KTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMV-SFLLSHIGVN 549
           +T +++A    H EI   LL+LG  V  K  + ++ LH+A      E+V + L+    VN
Sbjct: 41  RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVN 100
Query: 550 LQDNKGCTPLHCAIVGNQLEVFNHLI--NSNADITMYKNDSPLHLACATGNMDMITYAMK 607
             +  GCTPLH A   N+ E+   L+   +N D   + + + +H A A GN+ M+   + 
Sbjct: 101 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLF 160
Query: 608 Y-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFA 659
           Y    NI++  G TPLH+A     +E  KFL+ T+   +  + K+  T L  A
Sbjct: 161 YKASTNIQDTEGNTPLHLACDEERVEEAKFLV-TQGASIYIENKEEKTPLQVA 212

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 8/188 (4%)
Query: 588 SPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVN 646
           + LH AC+ G+ +++ + ++    VN ++D G +PLH+A S G  E VK LL  K   VN
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALL-VKGAHVN 100
Query: 647 HKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLV 705
              ++G T L +A    R ++  +LLE  A+ +  D    T ++ A  K  +L ++ +L+
Sbjct: 101 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKG-NLKMVHILL 159
Query: 706 KYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFG 765
            Y A  N+ +      TPLH A       + A+FLV +  A I + N   +T L  A  G
Sbjct: 160 FYKASTNIQDTEGN--TPLHLACDEERVEE-AKFLVTQ-GASIYIENKEEKTPLQVAKGG 215
Query: 766 NNLDLLKF 773
             L L + 
Sbjct: 216 LGLILKRL 223

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 42/215 (19%)
Query: 650 KDGSTALFFACYDKRLDLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDIIKMLVKYG 708
           +D  TAL +AC     ++VE LL+    VN   D  ++PL+ A       +I+K L+  G
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXD-EIVKALLVKG 96
Query: 709 ADVNLTNE-ACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN 767
           A VN  N+  C   TPLHYA+ +                                   N 
Sbjct: 97  AHVNAVNQNGC---TPLHYAASK-----------------------------------NR 118
Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
            ++   LL+ GA+PD  D  D + +  +  +G  ++V  LL Y A TN++  + G+T LH
Sbjct: 119 HEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTE-GNTPLH 177
Query: 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
            A    +++  K L+   A I  E+K  K     A
Sbjct: 178 LACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA 212

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 728 SYRGDCNDI-ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           +Y G  +++  R L ++  A  T  + ++RTAL++A    + ++++FLL+ G   +  D 
Sbjct: 14  AYSGKLDELKERILADKSLA--TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD 71
Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
              SPL  +   G  EIV  LL   A  N    ++G T LH AA  N+ +I  +LL+  A
Sbjct: 72  AGWSPLHIAASAGXDEIVKALLVKGAHVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGA 130
Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFLL--DAGSNI---EKATKYRMTFESSKVVEKHV 901
           + +A+D Y   A H A    N  +V  LL   A +NI   E  T   +  +  +V E   
Sbjct: 131 NPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKF 190
Query: 902 AKLRAANIYVD 912
              + A+IY++
Sbjct: 191 LVTQGASIYIE 201

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 87.0 bits (214), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 131/272 (48%), Gaps = 34/272 (12%)
Query: 290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDK 349
            R  T LH+AA    V IV+LL  +GA+  V+ ++  GL PLH AC     E+ ++LL  
Sbjct: 56  GRKSTPLHLAAGYNRVRIVQLLLQHGAD--VHAKDKGGLVPLHNACSYGHYEVTELLLKH 113
Query: 350 GADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV--------------PE-GERT 394
           GA +N+ +    TPL  A ++N +EV + L++HG D ++              PE  ER 
Sbjct: 114 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERL 173
Query: 395 -------ALHMASQFGNLEMVNYLLKHININ-HQDKDGWTPLTCSIKGQASL-----EVF 441
                  +L  A++  +L  V   L    IN  Q +   T L C++   ASL     +V 
Sbjct: 174 TYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAV---ASLHPKRKQVA 230
Query: 442 HSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKN 500
             ++  GA++  K  D  T LH+A    +  ++  L KH   +N+ + LG+T ++ A   
Sbjct: 231 ELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALA 290
Query: 501 NHLEIFNLLLKLGADVAVKMKSNFTCLHVACE 532
            HL+   LLL  G+D ++     FT   +  E
Sbjct: 291 GHLQTCRLLLSYGSDPSIISLQGFTAAQMGNE 322

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 122/279 (43%), Gaps = 31/279 (11%)
Query: 465 ACYFGNLAMVNYLVKHIDINSENDLGK--TPIYFAIKNNHLEIFNLLLKLGADVAVKMKS 522
           A   GN   +  L+  +++N     G+  TP++ A   N + I  LLL+ GADV  K K 
Sbjct: 31  AARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG 90
Query: 523 NFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
               LH AC +   E+   LL H   VN  D    TPLH A   N++EV + L++  AD 
Sbjct: 91  GLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP 150
Query: 582 TMY--KNDSPLHLACATGNMDMITYAMK---YFDVNIENDIG------------------ 618
           T+      S + +A      + +TY  K         E D+                   
Sbjct: 151 TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210
Query: 619 -ETPLHVAVS--HGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEAN 675
            ET LH AV+  H   + V  LL  K  +VN K KD  T L  A      D++E+L +  
Sbjct: 211 HETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG 270
Query: 676 ADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNL 713
           A +N  D    T L+ A +    L   ++L+ YG+D ++
Sbjct: 271 AKMNALDSLGQTALHRAALAG-HLQTCRLLLSYGSDPSI 308

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 36/315 (11%)
Query: 625 AVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGD-G 683
           A   G  E +  LL   N++ +      ST L  A    R+ +V++LL+  ADV+  D G
Sbjct: 31  AARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG 90
Query: 684 TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEE 743
              PL+ A       ++ ++L+K+GA VN  +   +  TPLH A+ +    ++   L+  
Sbjct: 91  GLVPLHNACSYG-HYEVTELLLKHGACVNAMD--LWQFTPLHEAASKNRV-EVCSLLLSH 146
Query: 744 CNADITLRNFNNRTALNFAAFGNNLDLLKF------LLKAGADPDILDLKDTSPL----- 792
             AD TL N + ++A++ A      + L +      LL+A  + D+  +K T  L     
Sbjct: 147 -GADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINF 205
Query: 793 -------------LSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839
                        ++S      ++ + LL   A+ N +  K   T LH AA     D+++
Sbjct: 206 KQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKN-KDFMTPLHVAAERAHNDVME 264
Query: 840 LLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN-----IEKATKYRMTFESS 894
           +L K+ A +NA D  G+ A H A  A +      LL  GS+     ++  T  +M  E+ 
Sbjct: 265 VLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAV 324
Query: 895 KVVEKHVAKLRAANI 909
           + +      +R +++
Sbjct: 325 QQILSESTPMRTSDV 339

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 759 LNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRT 818
           L  A  GN   L+  L     +    D + ++PL  +       IV  LL++ AD + + 
Sbjct: 29  LEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKD 88
Query: 819 IKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878
            K G   LH A  +   ++ +LLLK+ A +NA D +     H A      ++ + LL  G
Sbjct: 89  -KGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHG 147
Query: 879 SN 880
           ++
Sbjct: 148 AD 149

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 86.7 bits (213), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 740 LVEECNADITLRNFNN---RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSC 796
           ++ +   D+   NF N   +T L+ A   N  ++ + LL AG DP++ D +  +PL  +C
Sbjct: 24  VIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 83
Query: 797 RQGLYEIVDTLLEYNADTNLRTI-----KHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
            QG    V  L +     +L +I      +G T LH A+ H  L I++LL+   AD+NA+
Sbjct: 84  EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ 143
Query: 852 DK-YGKIAFHSACQAKNWDIVTFLLDAGSNIEKAT-----KYRMTF-ESSKVVEKHVAKL 904
           +   G+ A H A   +N D+V+ LL  G+++ + T      Y++T+   S  +++ + +L
Sbjct: 144 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL 203
Query: 905 RAANI 909
              N+
Sbjct: 204 TLENL 208

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 86.7 bits (213), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           +RTALH A      +IV+ L   G    VN ++ AG +PLHIA      EIVK LL KGA
Sbjct: 40  SRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSPLHIAASAGRDEIVKALLVKGA 97
Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG-ERTALHMASQFGNLEMVNY 410
            +N+ N +GCTPL  A ++N  E+   L+  G +    +  + TA+H A+  GNL+MV+ 
Sbjct: 98  HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157
Query: 411 LLKH-ININHQDKDGWTPL 428
           LL +  + N QD +G TPL
Sbjct: 158 LLFYKASTNIQDTEGNTPL 176

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 393 RTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
           RTALH A   G+ E+V +LL+  + +N +D  GW+PL             H    AG D 
Sbjct: 41  RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPL-------------HIAASAGRDE 87
Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
             K +                    LVK   +N+ N  G TP+++A   N  EI  +LL+
Sbjct: 88  IVKAL--------------------LVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE 127
Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEV 570
            GA+   K   + T +H A    +++MV  LL +    N+QD +G TPLH A    ++E 
Sbjct: 128 GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEE 187
Query: 571 FNHLINSNADITMYKNDSPLHLACATGNMDMI 602
              L+   A I +   +    L  A G + +I
Sbjct: 188 AKFLVTQGASIYIENKEEKTPLQVAKGGLGLI 219

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Query: 491 KTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMV-SFLLSHIGVN 549
           +T +++A    H EI   LL+LG  V  K  + ++ LH+A      E+V + L+    VN
Sbjct: 41  RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVN 100
Query: 550 LQDNKGCTPLHCAIVGNQLEVFNHLI--NSNADITMYKNDSPLHLACATGNMDMITYAMK 607
             +  GCTPLH A   N+ E+   L+   +N D   + + + +H A A GN+ M+   + 
Sbjct: 101 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLF 160
Query: 608 Y-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFA 659
           Y    NI++  G TPLH+A     +E  KFL+ T+   +  + K+  T L  A
Sbjct: 161 YKASTNIQDTEGNTPLHLACDEERVEEAKFLV-TQGASIYIENKEEKTPLQVA 212

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 8/188 (4%)
Query: 588 SPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVN 646
           + LH AC+ G+ +++ + ++    VN ++D G +PLH+A S G  E VK LL  K   VN
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALL-VKGAHVN 100
Query: 647 HKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLV 705
              ++G T L +A    R ++  +LLE  A+ +  D    T ++ A  K  +L ++ +L+
Sbjct: 101 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKG-NLKMVHILL 159
Query: 706 KYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFG 765
            Y A  N+ +      TPLH A       + A+FLV +  A I + N   +T L  A  G
Sbjct: 160 FYKASTNIQDTEGN--TPLHLACDEERVEE-AKFLVTQ-GASIYIENKEEKTPLQVAKGG 215
Query: 766 NNLDLLKF 773
             L L + 
Sbjct: 216 LGLILKRL 223

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 42/215 (19%)
Query: 650 KDGSTALFFACYDKRLDLVEILLEANADVN-LGDGTYTPLYTALMKDPSLDIIKMLVKYG 708
           +D  TAL +AC     ++VE LL+    VN   D  ++PL+ A       +I+K L+  G
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRD-EIVKALLVKG 96
Query: 709 ADVNLTNE-ACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN 767
           A VN  N+  C   TPLHYA+ +                                   N 
Sbjct: 97  AHVNAVNQNGC---TPLHYAASK-----------------------------------NR 118
Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
            ++   LL+ GA+PD  D  D + +  +  +G  ++V  LL Y A TN++  + G+T LH
Sbjct: 119 HEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTE-GNTPLH 177
Query: 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
            A    +++  K L+   A I  E+K  K     A
Sbjct: 178 LACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA 212

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 66.2 bits (160), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 728 SYRGDCNDI-ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           +Y G  +++  R L ++  A  T  + ++RTAL++A    + ++++FLL+ G   +  D 
Sbjct: 14  AYSGKLDELKERILADKSLA--TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD 71
Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
              SPL  +   G  EIV  LL   A  N    ++G T LH AA  N+ +I  +LL+  A
Sbjct: 72  AGWSPLHIAASAGRDEIVKALLVKGAHVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGA 130
Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFLL--DAGSNI---EKATKYRMTFESSKVVEKHV 901
           + +A+D Y   A H A    N  +V  LL   A +NI   E  T   +  +  +V E   
Sbjct: 131 NPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKF 190
Query: 902 AKLRAANIYVD 912
              + A+IY++
Sbjct: 191 LVTQGASIYIE 201

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           + R   +D  R L+    AD+   +    T L+ AA+  +L++++ LLK GAD +  D  
Sbjct: 21  AARAGRDDEVRILMAN-GADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTL 79
Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
            ++PL  +   G  EIV+ LL+  AD N +   +G T LH AA    L+I+++LLKY AD
Sbjct: 80  GSTPLHLAAHFGHLEIVEVLLKNGADVNAKD-DNGITPLHLAANRGHLEIVEVLLKYGAD 138
Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFL 874
           +NA+DK+GK AF  +    N D+   L
Sbjct: 139 VNAQDKFGKTAFDISINNGNEDLAEIL 165

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 86.3 bits (212), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 299 AAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGND 358
           AA     D V++L   GA+  VN  +  GLTPLH+A     LEIV++LL  GAD+N+ + 
Sbjct: 13  AAAAGQDDEVRILMANGAD--VNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDS 70
Query: 359 DGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPE-GERTALHMASQFGNLEMVNYLLKH-IN 416
            G TPL  A     LE+   L+ HG D++  +    T LH+A+  G LE+V  LLKH  +
Sbjct: 71  AGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGAD 130
Query: 417 INHQDKDGWTPLTCSI-KGQASL 438
           +N QD  G T    SI +GQ  L
Sbjct: 131 VNAQDALGLTAFDISINQGQEDL 153

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/122 (43%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
Query: 593 ACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKD 651
           A A G  D +   M    DVN  +D G TPLH+A ++G LE V+ LL     DVN     
Sbjct: 13  AAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKN-GADVNASDSA 71
Query: 652 GSTALFFACYDKRLDLVEILLEANADVNLGD-GTYTPLYTALMKDPSLDIIKMLVKYGAD 710
           G T L  A YD  L++VE+LL+  ADVN  D   +TPL+ A +    L+I+++L+K+GAD
Sbjct: 72  GITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSG-QLEIVEVLLKHGAD 130
Query: 711 VN 712
           VN
Sbjct: 131 VN 132

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 734 NDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLL 793
           +D  R L+    AD+   + N  T L+ AA    L++++ LLK GAD +  D    +PL 
Sbjct: 19  DDEVRILMAN-GADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLH 77
Query: 794 SSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK 853
            +   G  EIV+ LL++ AD N    + G T LH AA   QL+I+++LLK+ AD+NA+D 
Sbjct: 78  LAAYDGHLEIVEVLLKHGADVNAYD-RAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDA 136
Query: 854 YGKIAFHSACQAKNWDIVTFL 874
            G  AF  +      D+   L
Sbjct: 137 LGLTAFDISINQGQEDLAEIL 157

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 86.3 bits (212), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 740 LVEECNADITLRNFNN---RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSC 796
           ++ +   D+   NF N   +T L+ A   N  ++ + LL AG DP++ D +  +PL  +C
Sbjct: 27  VIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 86
Query: 797 RQGLYEIVDTLLEYNADTNLRTI-----KHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
            QG    V  L +     +L +I      +G T LH A+ H  L I++LL+   AD+NA+
Sbjct: 87  EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ 146
Query: 852 DK-YGKIAFHSACQAKNWDIVTFLLDAGSNIEKAT-----KYRMTF-ESSKVVEKHVAKL 904
           +   G+ A H A   +N D+V+ LL  G+++ + T      Y++T+   S  +++ + +L
Sbjct: 147 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL 206
Query: 905 RAANI 909
              N+
Sbjct: 207 TLENL 211

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 86.3 bits (212), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 35/172 (20%)
Query: 343 VKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQF 402
           V+IL+  GAD+N+ +D G TPL                                H+A+  
Sbjct: 30  VRILMANGADVNAHDDQGSTPL--------------------------------HLAAWI 57
Query: 403 GNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTA 461
           G+ E+V  LLKH  ++N +D DGWTPL  +      LE+   +++ GAD+ A+   G T 
Sbjct: 58  GHPEIVEVLLKHGADVNARDTDGWTPLHLAAD-NGHLEIVEVLLKYGADVNAQDAYGLTP 116
Query: 462 LHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
           LHLA   G+L +V  L+KH  D+N+++  GKT    +I N + ++  +L KL
Sbjct: 117 LHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
           R   +D  R L+    AD+   +    T L+ AA+  + ++++ LLK GAD +  D    
Sbjct: 23  RAGQDDEVRILMAN-GADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGW 81
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  +   G  EIV+ LL+Y AD N +   +G T LH AA    L+I+++LLK+ AD+N
Sbjct: 82  TPLHLAADNGHLEIVEVLLKYGADVNAQD-AYGLTPLHLAADRGHLEIVEVLLKHGADVN 140
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFL 874
           A+DK+GK AF  +    N D+   L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 86.3 bits (212), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
           R   +D  R L+    AD+   + +  T L+ AAF  +L++++ LLK GAD + +D    
Sbjct: 23  RAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGM 81
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  +   G  EIV+ LL+  AD N   ++ G T LH AA    L+I+++LLK  AD+N
Sbjct: 82  TPLRLAALFGHLEIVEVLLKNGADVNANDME-GHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFL 874
           A+DK+GK AF  +    N D+   L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
           R   +D  R L+    AD+   +    T L+ AA+  +L++++ LLK GAD D  D+   
Sbjct: 23  RAGQDDEVRILMAN-GADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGY 81
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  +   G  EIV+ LL+  AD N      G T LH AA    L+I+++LLK+ AD+N
Sbjct: 82  TPLHLAAYWGHLEIVEVLLKNGADVNAMD-SDGMTPLHLAAKWGYLEIVEVLLKHGADVN 140
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFL 874
           A+DK+GK AF  +    N D+   L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           LL + R G  + V  L+   AD N      G+T LH AA+   L+I+++LLK+ AD++A 
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAAD-NTGTTPLHLAAYSGHLEIVEVLLKHGADVDAS 76
Query: 852 DKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT----------FESSKVVEKHV 901
           D +G    H A    + +IV  LL  G+++       MT           E  +V+ KH 
Sbjct: 77  DVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHG 136
Query: 902 AKLRAANIY 910
           A + A + +
Sbjct: 137 ADVNAQDKF 145

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
           R   +D  R L+    AD+   ++   T L+      +L++++ LLK  AD +  D    
Sbjct: 23  RAGQDDEVRILMAN-GADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGW 81
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  +  +G  EIV+ LL+Y AD N    + G T LH AA    L+I+++LLKY AD+N
Sbjct: 82  TPLHLAAYRGHLEIVEVLLKYGADVNAMDYQ-GYTPLHLAAEDGHLEIVEVLLKYGADVN 140
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFL 874
           A+DK+GK AF  +    N D+   L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 258 TDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAE 317
           ++ PLH A + ++   V+ LL    + L  +    R  LH +   ++ +I   L      
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLL--SKM 59
Query: 318 KSVNVQNV---AGLTPLHIACRRKCLEIVKILLDK--GADINSGNDDGCTPLFCAIAQNC 372
           ++VN+ +    +G TP HIAC    LE+VK L D+    D+N   + G T L  A+ +  
Sbjct: 60  ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW 119
Query: 373 LEVFNYLVNHGCDLSVPEG-ERTALHMASQFGNLEMVNYL--LKHININHQDKDGWTPLT 429
            EV  +L+ +G  + + +   +  LH A+  G+L+++  L  L    +N QDK GWTPL 
Sbjct: 120 FEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL- 178
Query: 430 CSIKGQASLEVFHSIIEAGADIKAKLMDGTTA 461
                      FH++ E   D    L++   A
Sbjct: 179 -----------FHALAEGHGDAAVLLVEKYGA 199

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 522 SNFTCLHVAC---EFASIEMVSFLLSHIGVNLQ-DNKGCTPLHCAIVGNQLEVFNHLIN- 576
           SN+  LH AC   EF  ++    L S   + LQ D  G  PLH ++     E+ + L++ 
Sbjct: 2   SNYP-LHQACMENEFFKVQ--ELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK 58
Query: 577 -SNADITMYKNDS---PLHLACATGNMDMITYAMKYFDVNIENDI------GETPLHVAV 626
             N ++  Y +DS   P H+AC+ GN++++      +D  ++ D+      G T LH+AV
Sbjct: 59  MENVNLDDYPDDSGWTPFHIACSVGNLEVVK---SLYDRPLKPDLNKITNQGVTCLHLAV 115
Query: 627 SHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE-ANADVNLGDGT- 684
                E  +FL+      V  K K     L  A     L L+E+L     + VN  D   
Sbjct: 116 GKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 174
Query: 685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTN 715
           +TPL+ AL +      + ++ KYGA+ +L +
Sbjct: 175 WTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 258 TDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAE 317
           ++ PLH A + ++   V+ LL    + L  +    R  LH +   ++ +I   L      
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLL--SKM 59
Query: 318 KSVNVQNV---AGLTPLHIACRRKCLEIVKILLDK--GADINSGNDDGCTPLFCAIAQNC 372
           ++VN+ +    +G TP HIAC    LE+VK L D+    D+N   + G T L  A+ +  
Sbjct: 60  ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW 119
Query: 373 LEVFNYLVNHGCDLSVPEG-ERTALHMASQFGNLEMVNYL--LKHININHQDKDGWTPLT 429
            EV  +L+ +G  + + +   +  LH A+  G+L+++  L  L    +N QDK GWTPL 
Sbjct: 120 FEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL- 178
Query: 430 CSIKGQASLEVFHSIIEAGADIKAKLMDGTTA 461
                      FH++ E   D    L++   A
Sbjct: 179 -----------FHALAEGHGDAAVLLVEKYGA 199

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 522 SNFTCLHVAC---EFASIEMVSFLLSHIGVNLQ-DNKGCTPLHCAIVGNQLEVFNHLIN- 576
           SN+  LH AC   EF  ++    L S   + LQ D  G  PLH ++     E+ + L++ 
Sbjct: 2   SNYP-LHQACMENEFFKVQ--ELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK 58
Query: 577 -SNADITMYKNDS---PLHLACATGNMDMITYAMKYFDVNIENDI------GETPLHVAV 626
             N ++  Y +DS   P H+AC+ GN++++      +D  ++ D+      G T LH+AV
Sbjct: 59  MENVNLDDYPDDSGWTPFHIACSVGNLEVVK---SLYDRPLKPDLNKITNQGVTCLHLAV 115
Query: 627 SHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE-ANADVNLGDGT- 684
                E  +FL+      V  K K     L  A     L L+E+L     + VN  D   
Sbjct: 116 GKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 174
Query: 685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTN 715
           +TPL+ AL +      + ++ KYGA+ +L +
Sbjct: 175 WTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 258 TDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAE 317
           ++ PLH A + ++   V+ LL    + L  +    R  LH +   ++ +I   L      
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLL--SKM 59
Query: 318 KSVNVQNV---AGLTPLHIACRRKCLEIVKILLDK--GADINSGNDDGCTPLFCAIAQNC 372
           ++VN+ +    +G TP HIAC    LE+VK L D+    D+N   + G T L  A+ +  
Sbjct: 60  ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW 119
Query: 373 LEVFNYLVNHGCDLSVPEG-ERTALHMASQFGNLEMVNYL--LKHININHQDKDGWTPLT 429
            EV  +L+ +G  + + +   +  LH A+  G+L+++  L  L    +N QDK GWTPL 
Sbjct: 120 FEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL- 178
Query: 430 CSIKGQASLEVFHSIIEAGADIKAKLMDGTTA 461
                      FH++ E   D    L++   A
Sbjct: 179 -----------FHALAEGHGDAAVLLVEKYGA 199

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 522 SNFTCLHVAC---EFASIEMVSFLLSHIGVNLQ-DNKGCTPLHCAIVGNQLEVFNHLIN- 576
           SN+  LH AC   EF  ++    L S   + LQ D  G  PLH ++     E+ + L++ 
Sbjct: 2   SNYP-LHQACMENEFFKVQ--ELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK 58
Query: 577 -SNADITMYKNDS---PLHLACATGNMDMITYAMKYFDVNIENDI------GETPLHVAV 626
             N ++  Y +DS   P H+AC+ GN++++      +D  ++ D+      G T LH+AV
Sbjct: 59  MENVNLDDYPDDSGWTPFHIACSVGNLEVVK---SLYDRPLKPDLNKITNQGVTCLHLAV 115
Query: 627 SHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE-ANADVNLGDGT- 684
                E  +FL+      V  K K     L  A     L L+E+L     + VN  D   
Sbjct: 116 GKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 174
Query: 685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTN 715
           +TPL+ AL +      + ++ KYGA+ +L +
Sbjct: 175 WTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 769 DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHT 828
           D ++ L+  GAD + +D    +PL  + ++G  EIV+ LL++ AD N R I  G T LH 
Sbjct: 28  DEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDI-WGRTPLHL 86
Query: 829 AAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           AA    L+I+++LL+Y AD+NA+DK+GK AF  +    N D+   L
Sbjct: 87  AATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
           AA     D ++ L+  GAD + LD    +PL  + + G  EIV+ LL+Y AD N      
Sbjct: 21  AARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAED-NF 79
Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           G T LH AA    L+I+++LLK+ AD+NA+DK+GK AF  +    N D+   L
Sbjct: 80  GITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 6/172 (3%)
Query: 547 GVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITY 604
            VN+      +PLH A +G  L     L+   A +     D  +PL  AC +G+ D +  
Sbjct: 84  AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL 143
Query: 605 AMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK 663
            +++   V  E+D+  +P+H A   G +E V  L+     +++HK     T L+ AC ++
Sbjct: 144 LLQHGASVQPESDLA-SPIHEAARRGHVECVNSLIAYGG-NIDHKISHLGTPLYLACENQ 201
Query: 664 RLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTN 715
           +   V+ LLE+ ADVN G G  +PL+ A+++  S ++  +L+ +GAD    N
Sbjct: 202 QRACVKKLLESGADVNQGKGQDSPLH-AVVRTASEELACLLMDFGADTQAKN 252

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 713 LTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLK 772
           L  +A    +P+H A+  G    + R L+ +  A + +   ++ + L+ A  G +L  +K
Sbjct: 52  LMGDAVSDWSPMHEAAIHGHQLSL-RNLISQGWA-VNIITADHVSPLHEACLGGHLSCVK 109
Query: 773 FLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFH 832
            LLK GA  + +     +PL ++C  G ++ V+ LL++ A     +    ++ +H AA  
Sbjct: 110 ILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIHEAARR 167
Query: 833 NQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKA 884
             ++ +  L+ Y  +I+ +  +     + AC+ +    V  LL++G+++ + 
Sbjct: 168 GHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQG 219

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPLH A  N  +E+VKLLLE GA+  A +K+  RT LH+AA    +++VKLL + GA+  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGAD-- 60
Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           VN ++  G TPLH+A R   LE+VK+LL+ GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
           RT LH+AA    +++VKLL + GA+  VN ++  G TPLH+A R   LE+VK+LL+ GAD
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 353 INSGNDDGCTPLFCAIAQNCLEVFNYLVNHG 383
           +N+ + +G TPL  A     LEV   L+  G
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
           G TPLH+A R   LE+VK+LL+ GAD+N+ + +G TPL  A     LEV   L+  G D+
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 387 SVPEGE-RTALHMASQFGNLEMVNYLLK 413
           +  +   RT LH+A++ G+LE+V  LL+
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLE 89

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  + R G  E+V  LLE  AD N +  K+G T LH AA +  L+++KLLL+  AD+N
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVN 62
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879
           A+DK G+   H A +  + ++V  LL+AG+
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/106 (39%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 769 DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHT 828
           D ++ L+  GAD + +D    +PL  + ++G  EIV+ LL++ AD N   I  G T LH 
Sbjct: 28  DEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDI-WGRTPLHL 86
Query: 829 AAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           AA    L+I+++LL+Y AD+NA+DK+GK AF  +    N D+   L
Sbjct: 87  AATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 547 GVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITY 604
            VN+      +PLH A +G  L     L+   A +     D  +PL  AC +G+ D +  
Sbjct: 28  AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL 87
Query: 605 AMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDK 663
            +++   V  E+D+  +P+H A   G +E V  L+     +++HK     T L+ AC ++
Sbjct: 88  LLQHGASVQPESDLA-SPIHEAARRGHVECVNSLIAYGG-NIDHKISHLGTPLYLACENQ 145
Query: 664 RLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTN 715
           +   V+ LLE+ ADVN G G  +PL+ A+ +  S ++  +L+ +GAD    N
Sbjct: 146 QRACVKKLLESGADVNQGKGQDSPLH-AVARTASEELACLLMDFGADTQAKN 196

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 620 TPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN 679
           +P+H A  HG   +++ L+ ++   VN  T D  + L  AC    L  V+ILL+  A VN
Sbjct: 5   SPMHEAAIHGHQLSLRNLI-SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 63
Query: 680 -LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIAR 738
            +    +TPL+ A +   S D + +L+++GA V   ++     +P+H A+ RG    +  
Sbjct: 64  GVTADWHTPLFNACVSG-SWDCVNLLLQHGASVQPESDLA---SPIHEAARRGHVECVNS 119
Query: 739 FLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQ 798
            +    N D  + +    T L  A        +K LL++GAD +    +D SPL +  R 
Sbjct: 120 LIAYGGNIDHKISHLG--TPLYLACENQQRACVKKLLESGADVNQGKGQD-SPLHAVART 176
Query: 799 GLYEIVDTLLEYNADTNLR 817
              E+   L+++ ADT  +
Sbjct: 177 ASEELACLLMDFGADTQAK 195

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Query: 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
           +P+H A+  G    + R L+ +  A + +   ++ + L+ A  G +L  +K LLK GA  
Sbjct: 5   SPMHEAAIHGHQLSL-RNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 62
Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
           + +     +PL ++C  G ++ V+ LL++ A     +    ++ +H AA    ++ +  L
Sbjct: 63  NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIHEAARRGHVECVNSL 120
Query: 842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKA 884
           + Y  +I+ +  +     + AC+ +    V  LL++G+++ + 
Sbjct: 121 IAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQG 163

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
           + D SP+  +   G    +  L+      N+ T  H S  LH A     L  +K+LLK+ 
Sbjct: 1   MSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVS-PLHEACLGGHLSCVKILLKHG 59
Query: 846 ADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882
           A +N           +AC + +WD V  LL  G++++
Sbjct: 60  AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ 96

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 16/228 (7%)
Query: 656 LFFACYDKRLDLVEILLE--------ANADVNLGDGTYT-PLYTALMKDPSLDIIKMLVK 706
           L  A  D  L++V  LLE        A   V+  D  +  PL       P+   +  +  
Sbjct: 15  LLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPA 74
Query: 707 YGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGN 766
            G  VN+T++     +PLH A+  G  + I   L    NA    RN +    L+ A    
Sbjct: 75  SGLGVNVTSQD--GSSPLHVAALHGRADLIPLLLKHGANAGA--RNADQAVPLHLACQQG 130
Query: 767 NLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTAL 826
           +  ++K LL + A P+  DL   +PL+ +C  G +E+V  LL++ A  N    K G+TAL
Sbjct: 131 HFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNK-GNTAL 189
Query: 827 HTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           H A     + +++LLL + A +   +K  + A    C  +N  I+  L
Sbjct: 190 HEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVD--CAEQNSKIMELL 235

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 748 ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTL 807
           + + + +  + L+ AA     DL+  LLK GA+    +     PL  +C+QG +++V  L
Sbjct: 79  VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCL 138
Query: 808 LEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN 867
           L+ NA  N + +  G+T L  A      +++ LLL++ A INA +  G  A H A   K+
Sbjct: 139 LDSNAKPNKKDLS-GNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKH 197
Query: 868 WDIVTFLLDAGSNIEKATKYRMTF-----ESSKVVE 898
             +V  LL  G++++   K + T      ++SK++E
Sbjct: 198 VFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIME 233

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 769 DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHT 828
           D ++ L+  GAD + +D    +PL  + ++G  EIV+ LL++ AD N  +   G T LH 
Sbjct: 28  DEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVN-ASDSWGRTPLHL 86
Query: 829 AAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           AA    L+I+++LL+Y AD+NA+DK+GK AF  +    N D+   L
Sbjct: 87  AATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 8/190 (4%)
Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSE--NDLGKTPIYFAIKNN 501
           ++EAG D++    +  T LH A     + +V Y +    I  +   DL  TP+++A +  
Sbjct: 28  LVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87
Query: 502 HLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPL- 559
           HL +   L+K GAD ++      +C+H+A +F    +V++L++    V++ D  G TPL 
Sbjct: 88  HLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLM 147
Query: 560 HCAIVGNQLEVFNHLINSNADITM---YKNDSPLHLACATGNMDMITYAMKY-FDVNIEN 615
             A   + ++    L+  N  + +   Y  ++ LH A   GN  +I+  ++   +V+ +N
Sbjct: 148 WAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQN 207
Query: 616 DIGETPLHVA 625
             GE+ L +A
Sbjct: 208 IKGESALDLA 217

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 625 AVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT 684
           A  +G  E  + L+     DV    K+  T L +A  + R+DLV+  +   A V+     
Sbjct: 16  ATQYGIYERCRELVEA-GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD----- 69
Query: 685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEEC 744
                                + G D+N         TPLH+A+ +G  + + + +  + 
Sbjct: 70  ---------------------QLGGDLN--------STPLHWATRQGHLSMVVQLM--KY 98
Query: 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLL-SSCRQGLYEI 803
            AD +L +    + ++ AA   +  ++ +L+  G D D++D    +PL+ ++ R    + 
Sbjct: 99  GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDP 158
Query: 804 VDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSAC 863
              LL +N   NL    H +TALH A       +I LLL+  A+++A++  G+ A   A 
Sbjct: 159 TRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAK 218
Query: 864 QAKNWDIVTFLLDA 877
           Q KN  ++  L +A
Sbjct: 219 QRKNVWMINHLQEA 232

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 6/183 (3%)
Query: 702 KMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNF 761
           + LV+ G DV   ++    +T LH+A+      D+ ++ + +      L    N T L++
Sbjct: 26  RELVEAGYDVRQPDKEN--VTLLHWAAINNRI-DLVKYYISKGAIVDQLGGDLNSTPLHW 82
Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
           A    +L ++  L+K GADP ++D +  S +  + + G   IV  L+    D ++   ++
Sbjct: 83  ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD-QN 141
Query: 822 GSTALHTAAFH-NQLDIIKLLLKYNADINAEDKYGK-IAFHSACQAKNWDIVTFLLDAGS 879
           G T L  AA+  + +D  +LLL +N  +N  DKY K  A H A  A N  +++ LL+AG+
Sbjct: 142 GMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA 201
Query: 880 NIE 882
           N++
Sbjct: 202 NVD 204

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 73.2 bits (178), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
           AA     D ++ L+  GAD +  D K  +PL  +      EIV+ LL++ AD N      
Sbjct: 21  AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD-ND 79
Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           GST LH AA    L+I+++LLK+ AD+NA+DK+GK AF  +    N D+   L
Sbjct: 80  GSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 50/262 (19%)
Query: 240 LNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVA 299
           L L+++G  +NY+   ++  T LH A ++ ++++VK L+E GAN                
Sbjct: 57  LRLLERGADINYAN--VDGLTALHQACIDDNVDMVKFLVENGAN---------------- 98
Query: 300 AIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDD 359
                               +N  +  G  PLH A     L+I + L+ +GA + + N +
Sbjct: 99  --------------------INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE 138
Query: 360 GCTPLFCAIAQNCLEVFNYLVN-HGCDLSVP--EGERTALHMASQFGNLEMVNYLLKHIN 416
           G TPL  A  +   E+    VN  G D+     E ER  L  A Q+ N         HIN
Sbjct: 139 GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLN-------SGHIN 191
Query: 417 INHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNY 476
                K G T L  +   +   EV   +I+A  D+  K  DG T LH A ++G       
Sbjct: 192 DVRHAKSGGTALHVA-AAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRI 250
Query: 477 LVKHI-DINSENDLGKTPIYFA 497
           LV+++ D+ + N +G+T    A
Sbjct: 251 LVENLCDMEAVNKVGQTAFDVA 272

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE- 392
           AC     E V  LL++GADIN  N DG T L  A   + +++  +LV +G +++ P+ E 
Sbjct: 47  ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106
Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
              LH A+  G L++  YL+    ++   + +G TPL  + +      + + +   G DI
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166
Query: 452 K-AKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
           + A+  +    L  A  + N   +N  V+H         G T ++ A    + E+  LL+
Sbjct: 167 EAARKEEERIMLRDARQWLNSGHIND-VRHAKS------GGTALHVAAAKGYTEVLKLLI 219
Query: 511 KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHI 546
           +   DV +K    +T LH A  +   E    L+ ++
Sbjct: 220 QARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 17/243 (6%)
Query: 651 DGSTALFFACYDKRLDLVEILLEANADVNLG--DGTYTPLYTALMKDPSLDIIKMLVKYG 708
           D       AC     + V  LLE  AD+N    DG  T L+ A + D ++D++K LV+ G
Sbjct: 39  DDGAVFLAACSSGDTEEVLRLLERGADINYANVDG-LTALHQACIDD-NVDMVKFLVENG 96
Query: 709 ADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNL 768
           A++N  +   +   PLH A+  G   DIA +L+ +  A +   N    T L+ A      
Sbjct: 97  ANINQPDNEGW--IPLHAAASCGYL-DIAEYLISQ-GAHVGAVNSEGDTPLDIAEEEAME 152
Query: 769 DLLKFLL-KAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
           +LL+  + + G D +    ++   +L   RQ         L      ++R  K G TALH
Sbjct: 153 ELLQNEVNRQGVDIEAARKEEERIMLRDARQ--------WLNSGHINDVRHAKSGGTALH 204
Query: 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKY 887
            AA     +++KLL++   D+N +D  G    H+A      +    L++   ++E   K 
Sbjct: 205 VAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKV 264
Query: 888 RMT 890
             T
Sbjct: 265 GQT 267

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 70.1 bits (170), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGA 316
           + +TPLH+A  N   E VK LL KGA+  A  K  N T LH+AA     +IVKLL   GA
Sbjct: 8   DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGN-TPLHLAAKNGHAEIVKLLLAKGA 66
Query: 317 EKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINS 355
           +  VN ++  G TP H+A +    EIVK+L  KGAD+N+
Sbjct: 67  D--VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA 103

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 422 KDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KH 480
           KDG TPL  + K   + EV   ++  GAD+ A+  DG T LHLA   G+  +V  L+ K 
Sbjct: 7   KDGNTPLHNAAKNGHAEEVK-KLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65
Query: 481 IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVK 519
            D+N+ +  G TP + A KN H EI  LL   GADV  +
Sbjct: 66  ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
           G TPLH A  +G  E VK LL +K  DVN ++KDG+T L  A  +   ++V++LL   AD
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67
Query: 678 VNL--GDGTYTPLYTALMKDPSLDIIKMLVKYGADVN 712
           VN    DG  TP + A  K+   +I+K+L   GADVN
Sbjct: 68  VNARSKDGN-TPEHLA-KKNGHHEIVKLLDAKGADVN 102

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL ++ + G  E V  LL   AD N R+ K G+T LH AA +   +I+KLLL   AD+N
Sbjct: 11  TPLHNAAKNGHAEEVKKLLSKGADVNARS-KDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
           A  K G    H A +  + +IV  L   G+++
Sbjct: 70  ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
           AA     D ++ L   GAD +  D    +PL  +   G  EIV+ LL+  AD N  T   
Sbjct: 21  AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVN-ATGNT 79
Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           G T LH AA+ + L+I+++LLK+ AD+NA+DK+GK AF  +    N D+   L
Sbjct: 80  GRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 350 GADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV-PEGERTALHMASQFGNLEMV 408
           GAD+N+ + D  TPL  A+      +  YL   G D ++  + ER+ALH A+   +    
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 409 NYLLKHI----NINHQDKDGWTPLTCSIKGQASLEVFHS--IIEAGADI--------KAK 454
            Y L       +I   D++G T L      +   +V  +  ++E GA +         ++
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 455 LMDGTTALHLACYFGNLAMVNYLV--KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
              G TALH A    N  +V YLV  K  + + +++ GKTPI  A +   +E+   L++ 
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 513 GADVAVKMKSNFTCLHVA 530
           GA V     ++ T   +A
Sbjct: 336 GASVEAVDATDHTARQLA 353

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 680 LGDGTYTPLYTALMKDPSLDI---IKMLVKYGADVNLTNEACYYMTP------LHYASYR 730
           LGD  +T L      +P   I    +    Y     +T E+   + P      LH+ +  
Sbjct: 76  LGDFNHTNLQIPTEPEPESPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASN 135
Query: 731 GDCNDIARFLVEEC------NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDIL 784
                    +V E        AD+   + +  T L  A       L+ +L KAGADP I 
Sbjct: 136 SSAEKSEDLIVHEAKECIAAGADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIY 195
Query: 785 DLKDTSPLLSSCRQ-----GLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDII- 838
           +  + S L  +         +Y +  T L+ + +      ++G TAL   A +   D + 
Sbjct: 196 NKSERSALHQAAANRDFGXXVYXLNSTKLKGDIE---ELDRNGXTALXIVAHNEGRDQVA 252
Query: 839 --KLLLKYNADINAE-------DKY-GKIAFHSACQAKNWDIVTFLL-DAGSNIEK 883
             KLL++  A ++ +       +KY G+ A H A Q  N  IV +L+ + GSN +K
Sbjct: 253 SAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDK 308

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
           AA     D ++ L+  GAD +  D    +PL  +   G  EIV+ LL+  AD N      
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-AVDAI 79
Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           G T LH AAF   L+I ++LLK+ AD+NA+DK+GK AF  +    N D+   L
Sbjct: 80  GFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 350 GADINSGNDDGCTPLFCAIA-------------QNCLEVFNYLVNHGCDL--SVPEGERT 394
           G D+N    DG TPL  A               ++   V +  +  G  L         T
Sbjct: 1   GMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET 60
Query: 395 ALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGA-DIK 452
           ALH+A+++   +    LL+   + N QD  G TPL  ++   A   VF  +I   A D+ 
Sbjct: 61  ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQ-GVFQILIRNRATDLD 119
Query: 453 AKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
           A++ DGTT L LA       M+  L+  H D+N+ +DLGK+ +++A   N+++   +LLK
Sbjct: 120 ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK 179
Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
            GA+  ++     T L +A    S E    LL H
Sbjct: 180 NGANKDMQNNREETPLFLAAREGSYETAKVLLDH 213

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 35/258 (13%)
Query: 610 DVNIENDIGETPLHVA-VSHGCLEA-------------VKFLLNTKNIDVNHKTKDGSTA 655
           DVN+    G TPL +A  S G LE                F+    ++  N   + G TA
Sbjct: 3   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLH-NQTDRTGETA 61
Query: 656 LFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLT 714
           L  A    R D  + LLEA+AD N+ D    TPL+ A+  D    + ++L++  A  +L 
Sbjct: 62  LHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQ-GVFQILIRNRA-TDLD 119
Query: 715 NEACYYMTPLHYASYRGDCNDIARFLVE-------ECNADITLRNFNNRTALNFAAFGNN 767
                  TPL  A         AR  VE         +AD+   +   ++AL++AA  NN
Sbjct: 120 ARMHDGTTPLILA---------ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 170
Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
           +D    LLK GA+ D+ + ++ +PL  + R+G YE    LL++ A+ ++ T         
Sbjct: 171 VDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI-TDHMDRLPRD 229
Query: 828 TAAFHNQLDIIKLLLKYN 845
            A      DI++LL +YN
Sbjct: 230 IAQERMHHDIVRLLDEYN 247

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 749 TLRNFNNRT---ALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPL---LSSCRQGLYE 802
           +L N  +RT   AL+ AA  +  D  K LL+A AD +I D    +PL   +S+  QG+++
Sbjct: 49  SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ 108
Query: 803 IVDTLLEYNADTNLRTIKH-GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           I    L  N  T+L    H G+T L  AA      +++ L+  +AD+NA D  GK A H 
Sbjct: 109 I----LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW 164
Query: 862 ACQAKNWDIVTFLLDAGSNIEKATKYRMT----------FESSKVVEKHVA 902
           A    N D    LL  G+N +       T          +E++KV+  H A
Sbjct: 165 AAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 215

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPL  A    +IE V+ LLE GA+P  + K R  +AL +A+     DIV LL +   +  
Sbjct: 38  TPLIWASAFGEIETVRFLLEWGADPHILAKER-ESALSLASTGGYTDIVGLLLERDVD-- 94
Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           +N+ +  G TPL  A R   ++ V+ LL +GAD+ +  D G TP+  A+A    +V   +
Sbjct: 95  INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVI 154
Query: 380 VNH 382
            NH
Sbjct: 155 ENH 157

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 391 GERTALHMASQFGNLEMVNYLLKHIN--INHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
           G+  ++H  +  G L+ +   L+  +  +N  D+ G+TPL  +      +E    ++E G
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWA-SAFGEIETVRFLLEWG 59
Query: 449 ADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFN 507
           AD      +  +AL LA   G   +V  L+ + +DIN  +  G TP+ +A++ NH++   
Sbjct: 60  ADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVE 119
Query: 508 LLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDN 553
            LL  GAD+  +  S +T + +A      ++   + +HI    Q N
Sbjct: 120 ALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSN 165

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 483 INSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFL 542
           +N  ++ G TP+ +A     +E    LL+ GAD  +  K   + L +A      ++V  L
Sbjct: 29  VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88
Query: 543 LSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATG 597
           L   + +N+ D  G TPL  A+ GN ++    L+   AD+T   +   +P+ LA A G
Sbjct: 89  LERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG 146

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 590 LHLACATGNMDMITYAMKYFD--VNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNH 647
           +H   A G +D +   ++  D  VN  ++ G TPL  A + G +E V+FLL     D + 
Sbjct: 6   IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-GADPHI 64
Query: 648 KTKDGSTALFFACYDKRLDLVEILLEANADVNLGD-GTYTPLYTALMKDPSLDIIKMLVK 706
             K+  +AL  A      D+V +LLE + D+N+ D    TPL  A ++   +  ++ L+ 
Sbjct: 65  LAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYA-VRGNHVKCVEALLA 123
Query: 707 YGADVNLTNEACYYMTPLHYASYRG 731
            GAD  LT EA    TP+  A   G
Sbjct: 124 RGAD--LTTEADSGYTPMDLAVALG 146

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 24/153 (15%)
Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
           T L +A+    ++ ++FLL+ GADP IL  +  S L  +   G  +IV  LLE + D N+
Sbjct: 38  TPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINI 97
Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD 876
               +G T L  A   N +  ++ LL   AD+  E   G      A              
Sbjct: 98  YDW-NGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAV------------- 143
Query: 877 AGSNIEKATKYRMTFESSKVVEKHVAKLRAANI 909
                  A  YR   +  +V+E H+ KL  +N+
Sbjct: 144 -------ALGYR---KVQQVIENHILKLFQSNL 166

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 66.2 bits (160), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTN-LRTIK 820
           AA     D ++ L+  GAD +  D    +PL  +      EIV+ LL+  AD N +  I 
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAI- 79
Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
            G T LH  A +  L+I+++LLK+ AD+NA+DK+GK AF  +    N D+   L
Sbjct: 80  -GETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 26/231 (11%)
Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           VNV+   G TPL IA    C          G  + +GN +          ++   V +  
Sbjct: 3   VNVRGPDGFTPLMIA---SC---------SGGGLETGNSEE--------EEDAPAVISDF 42
Query: 380 VNHGCDL--SVPEGERTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQA 436
           +  G  L         TALH+A+++   +    LL+   + N QD  G TPL  ++   A
Sbjct: 43  IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA 102
Query: 437 SLEVFHSIIEAGA-DIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPI 494
              VF  +I   A D+ A++ DGTT L LA       M+  L+  H D+N+ +DLGK+ +
Sbjct: 103 Q-GVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161
Query: 495 YFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
           ++A   N+++   +LLK GA+  ++     T L +A    S E    LL H
Sbjct: 162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 212

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 610 DVNIENDIGETPLHVA-VSHGCLEA-------------VKFLLNTKNIDVNHKTKDGSTA 655
           DVN+    G TPL +A  S G LE                F+    ++  N   + G TA
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLH-NQTDRTGETA 60
Query: 656 LFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLT 714
           L  A    R D  + LLEA+AD N+ D    TPL+ A+  D    + ++L++  A  +L 
Sbjct: 61  LHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQ-GVFQILIRNRA-TDLD 118
Query: 715 NEACYYMTPLHYASYRGDCNDIARFLVE-------ECNADITLRNFNNRTALNFAAFGNN 767
                  TPL  A         AR  VE         +AD+   +   ++AL++AA  NN
Sbjct: 119 ARMHDGTTPLILA---------ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 169
Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
           +D    LLK GA+ D+ + ++ +PL  + R+G YE    LL++ A+ ++
Sbjct: 170 VDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 218

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 749 TLRNFNNRT---ALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPL---LSSCRQGLYE 802
           +L N  +RT   AL+ AA  +  D  K LL+A AD +I D    +PL   +S+  QG+++
Sbjct: 48  SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ 107
Query: 803 IVDTLLEYNADTNLRTIKH-GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           I    L  N  T+L    H G+T L  AA      +++ L+  +AD+NA D  GK A H 
Sbjct: 108 I----LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW 163
Query: 862 ACQAKNWDIVTFLLDAGSNIEKATKYRMT----------FESSKVVEKHVA 902
           A    N D    LL  G+N +       T          +E++KV+  H A
Sbjct: 164 AAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
           R   +D  R L+   N      ++   + L+ AA   +    + LL+AG   D     D 
Sbjct: 11  RAGQDDEVRILM--ANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDR 68
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  +  +G   IV+ LL++ AD N + +    TALH A  HN  ++++LL+KY AD++
Sbjct: 69  TPLHMAASEGHANIVEVLLKHGADVNAKDMLK-MTALHWATEHNHQEVVELLIKYGADVH 127
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFL 874
            + K+ K AF  +    N D+   L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           VNV+   G TPL IA    C          G  + +GN +          ++   V +  
Sbjct: 3   VNVRGPDGFTPLMIA---SC---------SGGGLETGNSEE--------EEDAPAVISDF 42
Query: 380 VNHGCDL--SVPEGERTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQA 436
           +  G  L         TALH+A+ +   +    LL+   + N QD  G TPL  ++   A
Sbjct: 43  IYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA 102
Query: 437 SLEVFHSIIEAGA-DIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPI 494
              VF  +I   A D+ A++ DGTT L LA       M+  L+  H D+N+ +DLGK+ +
Sbjct: 103 Q-GVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161
Query: 495 YFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
           ++A   N+++   +LLK GA+  ++     T L +A    S E    LL H
Sbjct: 162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 212

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 610 DVNIENDIGETPLHVA-VSHGCLEA-------------VKFLLNTKNIDVNHKTKDGSTA 655
           DVN+    G TPL +A  S G LE                F+    ++  N   + G+TA
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLH-NQTDRTGATA 60
Query: 656 LFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLT 714
           L  A    R D  + LLEA+AD N+ D    TPL+ A+  D    + ++L++  A  +L 
Sbjct: 61  LHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQ-GVFQILIRNRA-TDLD 118
Query: 715 NEACYYMTPLHYASYRGDCNDIARFLVE-------ECNADITLRNFNNRTALNFAAFGNN 767
                  TPL  A         AR  VE         +AD+   +   ++AL++AA  NN
Sbjct: 119 ARMHDGTTPLILA---------ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 169
Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
           +D    LLK GA+ D+ + ++ +PL  + R+G YE    LL++ A+ ++
Sbjct: 170 VDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 218

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 749 TLRNFNNRT---ALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPL---LSSCRQGLYE 802
           +L N  +RT   AL+ AA  +  D  K LL+A AD +I D    +PL   +S+  QG+++
Sbjct: 48  SLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ 107
Query: 803 IVDTLLEYNADTNLRTIKH-GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           I    L  N  T+L    H G+T L  AA      +++ L+  +AD+NA D  GK A H 
Sbjct: 108 I----LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW 163
Query: 862 ACQAKNWDIVTFLLDAGSNIEKATKYRMT----------FESSKVVEKHVA 902
           A    N D    LL  G+N +       T          +E++KV+  H A
Sbjct: 164 AAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 268 NSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAG 327
           +S  +++  LL +GA   A       T+LH+AA     D  K L D GA+   N Q+  G
Sbjct: 27  DSTAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGAD--ANSQDNTG 84
Query: 328 LTPLHIACRRKCLEIVKILL-DKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
            TPLH A     + + +ILL ++  ++N+   DG TPL  A       +   L+    D+
Sbjct: 85  RTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI 144
Query: 387 SVPEGE-RTALHMASQFGNLEMVNYLL-KHININHQDKDGWTPL 428
           +  +   +TALH A+   N E VN LL  H N + QD    TPL
Sbjct: 145 NAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPL 188

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
           GLTPL IA  R         LD G DI +  D            +  +V + L+  G +L
Sbjct: 2   GLTPLMIAAVRGGG------LDTGEDIENNED------------STAQVISDLLAQGAEL 43
Query: 387 --SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHS 443
             ++ +   T+LH+A++F   +    LL    + N QD  G TPL  ++   A + VF  
Sbjct: 44  NATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADA-MGVFQI 102
Query: 444 IIEAGA-DIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNN 501
           ++   A ++ A++ DGTT L LA       MV  L+    DIN+ ++ GKT +++A   N
Sbjct: 103 LLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVN 162
Query: 502 HLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
           + E  N+LL   A+   +   + T L +A    S E    LL +
Sbjct: 163 NTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDN 206

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 26/202 (12%)
Query: 498 IKNNH---LEIFNLLLKLGADVAVKM-KSNFTCLHVACEFASIEMVSFLL-SHIGVNLQD 552
           I+NN     ++ + LL  GA++   M K+  T LH+A  FA  +    LL +    N QD
Sbjct: 22  IENNEDSTAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQD 81
Query: 553 NKGCTPLHCAIVGNQLEVFNHLIN---SNADITMYKNDSPLHLAC--ATGNM--DMITYA 605
           N G TPLH A+  + + VF  L+    +N +  M+   +PL LA   A   M  D+IT  
Sbjct: 82  NTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITAD 141
Query: 606 MKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGS-----TALFFAC 660
               D+N  ++ G+T LH A +    EAV  LL      ++H  +D       T LF A 
Sbjct: 142 A---DINAADNSGKTALHWAAAVNNTEAVNILL------MHHANRDAQDDKDETPLFLAA 192
Query: 661 YDKRLDLVEILLEANADVNLGD 682
            +   +  + LL+  A+  + D
Sbjct: 193 REGSYEASKALLDNFANREITD 214

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           D N +++ G TPLH AV+   +   + LL  +  ++N +  DG+T L  A       +VE
Sbjct: 76  DANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVE 135
Query: 670 ILLEANADVNLGDGT 684
            L+ A+AD+N  D +
Sbjct: 136 DLITADADINAADNS 150

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 774 LLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH-GSTALHTAAFH 832
           LL AGAD +  D    +PL ++       +   LL  N  TNL    H G+T L  AA  
Sbjct: 70  LLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLR-NRATNLNARMHDGTTPLILAARL 128
Query: 833 NQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
               +++ L+  +ADINA D  GK A H A    N + V  LL   +N
Sbjct: 129 AIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHAN 176

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPL  A    +IE V+ LLE GA+P  + K R  +AL +A+     DIV LL +   +  
Sbjct: 38  TPLIWASAFGEIETVRFLLEWGADPHILAKER-ESALSLASTGGYTDIVGLLLERDVD-- 94
Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           +N+ +  G TPL  A     ++ V+ LL +GAD+ +  D G TP+  A+A    +V   +
Sbjct: 95  INIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVI 154
Query: 380 VNH 382
            NH
Sbjct: 155 ENH 157

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 391 GERTALHMASQFGNLEMVNYLLKHIN--INHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
           G+  ++H  +  G L+ +   L+  +  +N  D+ G+TPL  +      +E    ++E G
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWA-SAFGEIETVRFLLEWG 59
Query: 449 ADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFN 507
           AD      +  +AL LA   G   +V  L+ + +DIN  +  G TP+ +A+  NH++   
Sbjct: 60  ADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVE 119
Query: 508 LLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDN 553
            LL  GAD+  +  S +T + +A      ++   + +HI    Q N
Sbjct: 120 ALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSN 165

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 483 INSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFL 542
           +N  ++ G TP+ +A     +E    LL+ GAD  +  K   + L +A      ++V  L
Sbjct: 29  VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88
Query: 543 LSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATG 597
           L   + +N+ D  G TPL  A+ GN ++    L+   AD+T   +   +P+ LA A G
Sbjct: 89  LERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG 146

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 590 LHLACATGNMDMITYAMKYFD--VNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNH 647
           +H   A G +D +   ++  D  VN  ++ G TPL  A + G +E V+FLL     D + 
Sbjct: 6   IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-GADPHI 64
Query: 648 KTKDGSTALFFACYDKRLDLVEILLEANADVNLGD-GTYTPLYTALMKDPSLDIIKMLVK 706
             K+  +AL  A      D+V +LLE + D+N+ D    TPL  A+  +  +  ++ L+ 
Sbjct: 65  LAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGN-HVKCVEALLA 123
Query: 707 YGADVNLTNEACYYMTPLHYASYRG 731
            GAD  LT EA    TP+  A   G
Sbjct: 124 RGAD--LTTEADSGYTPMDLAVALG 146

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 24/153 (15%)
Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
           T L +A+    ++ ++FLL+ GADP IL  +  S L  +   G  +IV  LLE + D N+
Sbjct: 38  TPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINI 97
Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD 876
               +G T L  A   N +  ++ LL   AD+  E   G      A              
Sbjct: 98  YDW-NGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAV------------- 143
Query: 877 AGSNIEKATKYRMTFESSKVVEKHVAKLRAANI 909
                  A  YR   +  +V+E H+ KL  +N+
Sbjct: 144 -------ALGYR---KVQQVIENHILKLFQSNL 166

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 394 TALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGA-DI 451
           TALH+A+++   +    LL+   + N QD  G TPL  ++   A   VF  +I   A D+
Sbjct: 27  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQ-GVFQILIRNRATDL 85
Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
            A++ DGTT L LA       M+  L+  H D+N+ +DLGK+ +++A   N+++   +LL
Sbjct: 86  DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL 145
Query: 511 KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
           K GA+  ++     T L +A    S E    LL H
Sbjct: 146 KNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 180

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 646 NHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKML 704
           N   + G TAL  A    R D  + LLEA+AD N+ D    TPL+ A+  D    + ++L
Sbjct: 19  NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQ-GVFQIL 77
Query: 705 VKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE-------ECNADITLRNFNNRT 757
           ++  A  +L        TPL  A         AR  VE         +AD+   +   ++
Sbjct: 78  IRNRA-TDLDARMHDGTTPLILA---------ARLAVEGMLEDLINSHADVNAVDDLGKS 127
Query: 758 ALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLR 817
           AL++AA  NN+D    LLK GA+ D+ + ++ +PL  + R+G YE    LL++ A+ ++ 
Sbjct: 128 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI- 186
Query: 818 TIKHGSTALHTAAFHNQLDIIKLLLKYN 845
           T          A      DI++LL +YN
Sbjct: 187 TDHMDRLPRDIAQERMHHDIVRLLDEYN 214

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 749 TLRNFNNRT---ALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPL---LSSCRQGLYE 802
           +L N  +RT   AL+ AA  +  D  K LL+A AD +I D    +PL   +S+  QG+++
Sbjct: 16  SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ 75
Query: 803 IVDTLLEYNADTNLRTIKH-GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           I    L  N  T+L    H G+T L  AA      +++ L+  +AD+NA D  GK A H 
Sbjct: 76  I----LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW 131
Query: 862 ACQAKNWDIVTFLLDAGSNIEKATKYRMT----------FESSKVVEKHVA 902
           A    N D    LL  G+N +       T          +E++KV+  H A
Sbjct: 132 AAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 182

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 552 DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYK--NDSPLHLACATGNMDMITYAMKYF 609
           D +G TPL+ A+  N +E+   LI+  ADI +    +DSP   A A G  +++ Y +K+ 
Sbjct: 36  DTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHA 95
Query: 610 --DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKR--- 664
             D+N  N  G   L  A   G ++ VK LL     D++ +   G TAL  A   +    
Sbjct: 96  TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ 155
Query: 665 --LDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKY 707
              D+V++L+E  AD ++ D +         +    +I K+L +Y
Sbjct: 156 LYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 634 VKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALM 693
           VK +L      V+    +G+T L  A ++  +++ + L++  AD+NL +      Y    
Sbjct: 21  VKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAG 80
Query: 694 KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNF 753
                +I+  ++K+ A  +L     Y    L  A+ +G  +++ + L+E+   DI  +N 
Sbjct: 81  AQGRTEILAYMLKH-ATPDLNKHNRYGGNALIPAAEKGHIDNV-KLLLEDGREDIDFQND 138
Query: 754 NNRTALNFAAF---GNNL--DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLL 808
              TAL  A     GN L  D++K L++ GAD  I D    + +  + ++G  EI   L 
Sbjct: 139 FGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198
Query: 809 EYN 811
           +YN
Sbjct: 199 QYN 201

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Query: 686 TPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN 745
           TPL  A+  +  ++I K L+  GAD+NL N      +P  YA  +G   +I  ++++   
Sbjct: 41  TPLNIAVHNN-DIEIAKALIDRGADINLQNSIS--DSPYLYAGAQGRT-EILAYMLKHAT 96
Query: 746 ADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG-ADPDILDLKDTSPLLSSC--RQG--L 800
            D+   N     AL  AA   ++D +K LL+ G  D D  +    + L+ +   R+G  L
Sbjct: 97  PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL 156
Query: 801 YE-IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
           Y+ IV  L+E  AD +++    G TA+  A      +I K+L +YN
Sbjct: 157 YQDIVKLLMENGADQSIKD-NSGRTAMDYANQKGYTEISKILAQYN 201

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           SPL  +CR+G   +V+ L+   A  N+   +   T LH AA H   DI++ LL+Y ADIN
Sbjct: 36  SPLHWACREGRSAVVEMLIMRGARINVMN-RGDDTPLHLAASHGHRDIVQKLLQYKADIN 94
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKY-RMTFESSKVVEKHVAKLRA 906
           A +++G +  H AC      +   L+  G+ +    KY  M  + +K   + + + RA
Sbjct: 95  AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERA 152

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYN 811
           N    T L+ A+   ++  +++LL+ G+DP++ D    +PL  +C  G  ++V+ LL++ 
Sbjct: 7   NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK 66
Query: 812 ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
           A  N    ++ S  LH AA +  +DI+KLLL Y A  NA + +G
Sbjct: 67  ALVNTTGYQNDS-PLHDAAKNGHVDIVKLLLSYGASRNAVNIFG 109

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           SPL  +CR+G   +V+ L+   A  N+   +   T LH AA H   DI++ LL+Y ADIN
Sbjct: 41  SPLHWACREGRSAVVEMLIMRGARINVMN-RGDDTPLHLAASHGHRDIVQKLLQYKADIN 99
Query: 850 AEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKY-RMTFESSKVVEKHVAKLRA 906
           A +++G +  H AC      +   L+  G+ +    KY  M  + +K   + + + RA
Sbjct: 100 AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERA 157

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 257 ETDTPLHSAILNSDIELVKLLLE-KGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYG 315
           E D  L  A    D+E VK L   +  N   IE  R  T LH AA    V +V+ L  +G
Sbjct: 7   EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-GRQSTPLHFAAGYNRVSVVEYLLQHG 65
Query: 316 AEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
           A+  V+ ++  GL PLH AC     E+ ++L+  GA +N  +    TPL  A A+   E+
Sbjct: 66  AD--VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEI 123
Query: 376 FNYLVNHGCD 385
              L+ HG D
Sbjct: 124 CKLLLQHGAD 133

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 465 ACYFGNLAMVNYLVKHIDINSENDLGK--TPIYFAIKNNHLEIFNLLLKLGADVAVKMKS 522
           A   G++  V  L     +N  +  G+  TP++FA   N + +   LL+ GADV  K K 
Sbjct: 15  AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG 74
Query: 523 NFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
               LH AC +   E+   L+ H   VN+ D    TPLH A    + E+   L+   AD 
Sbjct: 75  GLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 134
Query: 582 TMYKND--SPLHL 592
           T    D  +PL L
Sbjct: 135 TKKNRDGNTPLDL 147

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 748 ITLRNFNNR--TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVD 805
           +  R+   R  T L+FAA  N + ++++LL+ GAD    D     PL ++C  G YE+ +
Sbjct: 33  VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAE 92
Query: 806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
            L+++ A  N+  +    T LH AA   + +I KLLL++ AD   +++ G
Sbjct: 93  LLVKHGAVVNVADLWK-FTPLHEAAAKGKYEICKLLLQHGADPTKKNRDG 141

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIK-HGSTALHTAAFHNQLDIIKLLLKYNADINA 850
           LL + + G  E V  L    +  N R I+   ST LH AA +N++ +++ LL++ AD++A
Sbjct: 12  LLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 70
Query: 851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           +DK G +  H+AC   ++++   L+  G+ +  A  ++ T
Sbjct: 71  KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT 110

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 317 EKSVNVQNVAGL---------TPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCA 367
           EKS+N QN+  L         TPL +AC       +  L++    +   + +G T L  A
Sbjct: 17  EKSIN-QNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWA 75
Query: 368 IAQNCLEVFNYLVNHGCDLSVPE-GERTALHMASQFGNLEMVNYLLKH-ININHQDKDGW 425
           +  N L +   L++ G +++  +   +T L  +  FG  EM  +LL+H  N+N ++ +G 
Sbjct: 76  VKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGE 135
Query: 426 TPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMV 474
           TPL  + K   S E+   ++E GADI A+ + G TA   A  FG   ++
Sbjct: 136 TPLIVASKYGRS-EIVKKLLELGADISARDLTGLTAEASARIFGRQEVI 183

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 460 TALHLACYFGNLAMVNYLVKHIDINSENDL-GKTPIYFAIKNNHLEIFNLLLKLGADVAV 518
           T L +AC  G    ++ LV++ D   + D+ G T + +A+KNN L I   LL  G++V  
Sbjct: 37  TPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT 96
Query: 519 KMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDN--KGCTPLHCAIVGNQLEVFNHLIN 576
           K  S  T L  +  F   EM  FLL H G N+ D   +G TPL  A    + E+   L+ 
Sbjct: 97  KDFSGKTPLMWSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVKKLLE 155
Query: 577 SNADIT 582
             ADI+
Sbjct: 156 LGADIS 161

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 718 CYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKA 777
            Y  TPL  A   G  N I + LVE  +  +  ++    TAL +A   N L + + LL  
Sbjct: 33  SYNRTPLMVACMLGMENAIDK-LVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSK 90
Query: 778 GADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDI 837
           G++ +  D    +PL+ S   G  E+   LLE+ A+ N R +  G T L  A+ + + +I
Sbjct: 91  GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL-EGETPLIVASKYGRSEI 149
Query: 838 IKLLLKYNADINAEDKYGKIAFHSA 862
           +K LL+  ADI+A D  G  A  SA
Sbjct: 150 VKKLLELGADISARDLTGLTAEASA 174

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 257 ETDTPLHSAILNSDIELVKLLLE-KGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYG 315
           E D  L  A    D+E VK L   +  N   IE  R  T LH AA    V +V+ L  +G
Sbjct: 9   EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-GRQSTPLHFAAGYNRVSVVEYLLQHG 67
Query: 316 AEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
           A+  V+ ++  GL PLH AC     E+ ++L+  GA +N  +    TPL  A A+   E+
Sbjct: 68  AD--VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEI 125
Query: 376 FNYLVNHGCD 385
              L+ HG D
Sbjct: 126 CKLLLQHGAD 135

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 465 ACYFGNLAMVNYLVKHIDINSENDLGK--TPIYFAIKNNHLEIFNLLLKLGADVAVKMKS 522
           A   G++  V  L     +N  +  G+  TP++FA   N + +   LL+ GADV  K K 
Sbjct: 17  AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG 76
Query: 523 NFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
               LH AC +   E+   L+ H   VN+ D    TPLH A    + E+   L+   AD 
Sbjct: 77  GLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 136
Query: 582 TMYKND--SPLHL 592
           T    D  +PL L
Sbjct: 137 TKKNRDGNTPLDL 149

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 748 ITLRNFNNR--TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVD 805
           +  R+   R  T L+FAA  N + ++++LL+ GAD    D     PL ++C  G YE+ +
Sbjct: 35  VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAE 94
Query: 806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
            L+++ A  N+  +    T LH AA   + +I KLLL++ AD   +++ G
Sbjct: 95  LLVKHGAVVNVADLWK-FTPLHEAAAKGKYEICKLLLQHGADPTKKNRDG 143

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIK-HGSTALHTAAFHNQLDIIKLLLKYNADINA 850
           LL + + G  E V  L    +  N R I+   ST LH AA +N++ +++ LL++ AD++A
Sbjct: 14  LLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 72
Query: 851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           +DK G +  H+AC   ++++   L+  G+ +  A  ++ T
Sbjct: 73  KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT 112

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 417 INHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNY 476
           INH D++G+TPL  +      + V   +++ GAD +       +AL LAC  G   +V  
Sbjct: 45  INHTDEEGFTPLMWA-AAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKM 103
Query: 477 LVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFAS 535
           L+   +D+N  +  G TP+ +A+  NH++   +LL+ GAD  ++  S +  + +A     
Sbjct: 104 LLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY 163
Query: 536 IEMVSFLLSHIGVNLQDNK 554
             +   + SH+   LQ+ K
Sbjct: 164 RSVQQVIESHLLKLLQNIK 182

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 476 YLVKHID----INSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVAC 531
           YL   I+    IN  ++ G TP+ +A  +  + +   LL+ GAD  +  K   + L +AC
Sbjct: 34  YLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLAC 93
Query: 532 EFASIEMVSFLLS-HIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDS-- 588
                ++V  LL   + VN  D  G TPL  A+ GN ++    L+ S AD T+  +    
Sbjct: 94  SKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN 153
Query: 589 PLHLACATG 597
            + LA A G
Sbjct: 154 SMDLAVALG 162

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 39/140 (27%)
Query: 645 VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNL-GDGTYTPLYTALMKDPSLDIIKM 703
           +NH  ++G T L +A    ++ +VE LL+  AD  L G G  + L  A  K  + DI+KM
Sbjct: 45  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT-DIVKM 103
Query: 704 LVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAA 763
           L+                                     +C  D+   ++N  T L +A 
Sbjct: 104 LL-------------------------------------DCGVDVNEYDWNGGTPLLYAV 126
Query: 764 FGNNLDLLKFLLKAGADPDI 783
            GN++  +K LL++GADP I
Sbjct: 127 HGNHVKCVKMLLESGADPTI 146

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
           T L +AA    + +++FLL+ GADP +L     S L  +C +G  +IV  LL+   D N 
Sbjct: 54  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVN- 112
Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
               +G T L  A   N +  +K+LL+  AD   E   G
Sbjct: 113 EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSG 151

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 281 GANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGL--TPLHIACRRK 338
           GA  +++  S     L  AA    V+ VK L      +SVN +++ G   TPLH A    
Sbjct: 1   GAMGISLGNSEADRQLLEAAKAGDVETVKKLCTV---QSVNCRDIEGRQSTPLHFAAGYN 57
Query: 339 CLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPE-GERTALH 397
            + +V+ LL  GAD+++ +  G  PL  A +    EV   LV HG  ++V +  + T LH
Sbjct: 58  RVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLH 117
Query: 398 MASQFGNLEMVNYLLKH-ININHQDKDGWTPL 428
            A+  G  E+   LL+H  +   +++DG TPL
Sbjct: 118 EAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 149

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 383 GCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGW--TPLTCSIKGQASLEV 440
           G  L   E +R  L  A++ G++E V  L    ++N +D +G   TPL  +  G   + V
Sbjct: 4   GISLGNSEADRQLLE-AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAA-GYNRVSV 61
Query: 441 FHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGK-TPIYFAIK 499
              +++ GAD+ AK   G   LH AC +G+  +   LVKH  + +  DL K TP++ A  
Sbjct: 62  VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAA 121
Query: 500 NNHLEIFNLLLKLGADVAVKMKSNFTCL 527
               EI  LLL+ GAD   K +   T L
Sbjct: 122 KGKYEICKLLLQHGADPTKKNRDGNTPL 149

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 465 ACYFGNLAMVNYLVKHIDINSENDLGK--TPIYFAIKNNHLEIFNLLLKLGADVAVKMKS 522
           A   G++  V  L     +N  +  G+  TP++FA   N + +   LL+ GADV  K K 
Sbjct: 19  AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG 78
Query: 523 NFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
               LH AC +   E+   L+ H   VN+ D    TPLH A    + E+   L+   AD 
Sbjct: 79  GLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 138
Query: 582 TMYKND--SPLHL 592
           T    D  +PL L
Sbjct: 139 TKKNRDGNTPLDL 151

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 748 ITLRNFNNR--TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVD 805
           +  R+   R  T L+FAA  N + ++++LL+ GAD    D     PL ++C  G YE+ +
Sbjct: 37  VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAE 96
Query: 806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
            L+++ A  N+  +    T LH AA   + +I KLLL++ AD   +++ G
Sbjct: 97  LLVKHGAVVNVADLWK-FTPLHEAAAKGKYEICKLLLQHGADPTKKNRDG 145

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIK-HGSTALHTAAFHNQLDIIKLLLKYNADINA 850
           LL + + G  E V  L    +  N R I+   ST LH AA +N++ +++ LL++ AD++A
Sbjct: 16  LLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 74
Query: 851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           +DK G +  H+AC   ++++   L+  G+ +  A  ++ T
Sbjct: 75  KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT 114

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           LL + R G  + V  L+   AD   +  K+GST LH AA +  L+++KLLL+  AD+NA+
Sbjct: 10  LLEAARAGQDDEVRILMANGADVAAKD-KNGSTPLHLAARNGHLEVVKLLLEAGADVNAQ 68
Query: 852 DKYGKIAFHSACQAKNWDIVTFL 874
           DK+GK AF  +    N D+   L
Sbjct: 69  DKFGKTAFDISIDNGNEDLAEIL 91

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 417 INHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNY 476
           INH D++G+TPL  +      + V   +++ GAD +       +AL LAC  G   +V  
Sbjct: 29  INHTDEEGFTPLMWA-AAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKM 87
Query: 477 LVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFAS 535
           L+   +D+N  +  G TP+ +A+  NH++   +LL+ GAD  ++  S +  + +A     
Sbjct: 88  LLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY 147
Query: 536 IEMVSFLLSHIGVNLQDNK 554
             +   + SH+   LQ+ K
Sbjct: 148 RSVQQVIESHLLKLLQNIK 166

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 476 YLVKHID----INSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVAC 531
           YL   I+    IN  ++ G TP+ +A  +  + +   LL+ GAD  +  K   + L +AC
Sbjct: 18  YLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLAC 77
Query: 532 EFASIEMVSFLLS-HIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDS-- 588
                ++V  LL   + VN  D  G TPL  A+ GN ++    L+ S AD T+  +    
Sbjct: 78  SKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN 137
Query: 589 PLHLACATG 597
            + LA A G
Sbjct: 138 SMDLAVALG 146

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 39/140 (27%)
Query: 645 VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNL-GDGTYTPLYTALMKDPSLDIIKM 703
           +NH  ++G T L +A    ++ +VE LL+  AD  L G G  + L  A  K  + DI+KM
Sbjct: 29  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT-DIVKM 87
Query: 704 LVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAA 763
           L+                                     +C  D+   ++N  T L +A 
Sbjct: 88  LL-------------------------------------DCGVDVNEYDWNGGTPLLYAV 110
Query: 764 FGNNLDLLKFLLKAGADPDI 783
            GN++  +K LL++GADP I
Sbjct: 111 HGNHVKCVKMLLESGADPTI 130

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
           T L +AA    + +++FLL+ GADP +L     S L  +C +G  +IV  LL+   D N 
Sbjct: 38  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVN- 96
Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
               +G T L  A   N +  +K+LL+  AD   E   G
Sbjct: 97  EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSG 135

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 417 INHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNY 476
           INH D++G+TPL  +      + V   +++ GAD +       +AL LAC  G   +V  
Sbjct: 27  INHTDEEGFTPLMWA-AAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKM 85
Query: 477 LVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFAS 535
           L+   +D+N  +  G TP+ +A+  NH++   +LL+ GAD  ++  S +  + +A     
Sbjct: 86  LLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY 145
Query: 536 IEMVSFLLSHI 546
             +   + SH+
Sbjct: 146 RSVQQVIESHL 156

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 476 YLVKHID----INSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVAC 531
           YL   I+    IN  ++ G TP+ +A  +  + +   LL+ GAD  +  K   + L +AC
Sbjct: 16  YLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLAC 75
Query: 532 EFASIEMVSFLLS-HIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDS-- 588
                ++V  LL   + VN  D  G TPL  A+ GN ++    L+ S AD T+  +    
Sbjct: 76  SKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN 135
Query: 589 PLHLACATG 597
            + LA A G
Sbjct: 136 SMDLAVALG 144

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 39/140 (27%)
Query: 645 VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNL-GDGTYTPLYTALMKDPSLDIIKM 703
           +NH  ++G T L +A    ++ +VE LL+  AD  L G G  + L  A  K  + DI+KM
Sbjct: 27  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT-DIVKM 85
Query: 704 LVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAA 763
           L+                                     +C  D+   ++N  T L +A 
Sbjct: 86  LL-------------------------------------DCGVDVNEYDWNGGTPLLYAV 108
Query: 764 FGNNLDLLKFLLKAGADPDI 783
            GN++  +K LL++GADP I
Sbjct: 109 HGNHVKCVKMLLESGADPTI 128

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
           T L +AA    + +++FLL+ GADP +L     S L  +C +G  +IV  LL+   D N 
Sbjct: 36  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVN- 94
Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
               +G T L  A   N +  +K+LL+  AD   E   G
Sbjct: 95  EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSG 133

>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 78/270 (28%), Positives = 111/270 (41%), Gaps = 45/270 (16%)
Query: 457 DGTTALHLACYFGNLAMVNYLVK----HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
           DG TALHLA    +   +++L+     H  ++ +NDLG+T ++ A           L   
Sbjct: 8   DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67
Query: 513 GADVAVKMKSNFTCLHVACEFASIEMVSFLL----SH----IGVNLQDNKGCTP--LHC- 561
           GA V V  +   T LH+AC   +      LL    SH        L  ++ CTP   H  
Sbjct: 68  GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP 127
Query: 562 AIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETP 621
           A V +Q          N +      D    L     N D                 G TP
Sbjct: 128 AAVDSQ---------PNPENEEEPRDEDWRLQLEAENYD-----------------GHTP 161
Query: 622 LHVAVSHGCLEAVKFLLNTKNIDVNHKTKD-GSTALFFACYDKRLDLVEILLEANADVNL 680
           LHVAV H   E V+ LL     D+N      G T L  A   +   ++E+LL+A AD   
Sbjct: 162 LHVAVIHKDAEMVR-LLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA 220
Query: 681 G-DGTYTPLYTALMKDPSLDIIKMLVKYGA 709
              G  TPL +AL++ P+  + ++L  +GA
Sbjct: 221 RMYGGRTPLGSALLR-PNPILARLLRAHGA 249

>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 78/270 (28%), Positives = 111/270 (41%), Gaps = 45/270 (16%)
Query: 457 DGTTALHLACYFGNLAMVNYLVK----HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
           DG TALHLA    +   +++L+     H  ++ +NDLG+T ++ A           L   
Sbjct: 8   DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67
Query: 513 GADVAVKMKSNFTCLHVACEFASIEMVSFLL----SH----IGVNLQDNKGCTP--LHC- 561
           GA V V  +   T LH+AC   +      LL    SH        L  ++ CTP   H  
Sbjct: 68  GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP 127
Query: 562 AIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETP 621
           A V +Q          N +      D    L     N D                 G TP
Sbjct: 128 AAVDSQ---------PNPENEEEPRDEDWRLQLEAENYD-----------------GHTP 161
Query: 622 LHVAVSHGCLEAVKFLLNTKNIDVNHKTKD-GSTALFFACYDKRLDLVEILLEANADVNL 680
           LHVAV H   E V+ LL     D+N      G T L  A   +   ++E+LL+A AD   
Sbjct: 162 LHVAVIHKDAEMVR-LLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA 220
Query: 681 G-DGTYTPLYTALMKDPSLDIIKMLVKYGA 709
              G  TPL +AL++ P+  + ++L  +GA
Sbjct: 221 RMYGGRTPLGSALLR-PNPILARLLRAHGA 249

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           LL + R G  + V  L+   AD N +  K G T LH AA    L+I+++LLK  AD+NA+
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKD-KDGYTPLHLAAREGHLEIVEVLLKAGADVNAQ 64
Query: 852 DKYGKIAFHSACQAKNWDIVTFL 874
           DK+GK AF  +    N D+   L
Sbjct: 65  DKFGKTAFDISIDNGNEDLAEIL 87

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 394 TALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGA-DI 451
           TALH+A+++   +    LL+   +   QD  G TPL  ++   A   VF  ++   A D+
Sbjct: 24  TALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQ-GVFQILLRNRATDL 82
Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
            A++ DGTT L LA       M+  L+  H D+N+ +DLGK+ +++A   N+++   +LL
Sbjct: 83  DARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL 142
Query: 511 KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
           K GA+  ++     T L +A    S E    LL H
Sbjct: 143 KNGANKDMQNNKEETPLFLAAREGSYETAKVLLDH 177

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 646 NHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKML 704
           N   + G TAL  A    R D  + LLEA+AD  + D    TPL+ A+  D    + ++L
Sbjct: 16  NQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQ-GVFQIL 74
Query: 705 VKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF 764
           ++  A  +L        TPL  A+ R     +   L+   +AD+   +   ++AL++AA 
Sbjct: 75  LRNRA-TDLDARMHDGTTPLILAA-RLALEGMLEDLINS-HADVNAVDDLGKSALHWAAA 131
Query: 765 GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGST 824
            NN+D    LLK GA+ D+ + K+ +PL  + R+G YE    LL++ A+ ++ T      
Sbjct: 132 VNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDI-TDHMDRL 190
Query: 825 ALHTAAFHNQLDIIKLLLKY 844
               A      DI++LL +Y
Sbjct: 191 PRDIAQERMHHDIVRLLDEY 210

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 749 TLRNFNNRT---ALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPL---LSSCRQGLYE 802
           +L N  +RT   AL+ AA  +  D  K LL+A AD  I D    +PL   +S+  QG+++
Sbjct: 13  SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQ 72
Query: 803 IVDTLLEYNADTNLRTIKH-GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           I    L  N  T+L    H G+T L  AA      +++ L+  +AD+NA D  GK A H 
Sbjct: 73  I----LLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHW 128
Query: 862 ACQAKNWDIVTFLLDAGSNIEKATKYRMT----------FESSKVVEKHVA 902
           A    N D    LL  G+N +       T          +E++KV+  H A
Sbjct: 129 AAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFA 179

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 262 LHSAILNSDIELVKLLLEKG-ANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSV 320
           L  A    D++ V+ LL +   +P A+ +   +TAL V  +  S  I   L   GA  S 
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRF-GKTALQVM-MFGSTAIALELLKQGA--SP 61
Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
           NVQ+ +G +P+H A R   L+ +K+L++ GAD+N  +  G  P+  A+ +    V ++L 
Sbjct: 62  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 381 NHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKHI 415
               DL   +    T L +A Q G  ++V+ L  H+
Sbjct: 122 AES-DLHRRDARGLTPLELALQRGAQDLVDILQGHM 156

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 36/148 (24%)
Query: 727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           A+ RGD  ++ R L  E      L  F  +TAL    FG+    L+ LLK GA P++ D 
Sbjct: 9   AAARGDVQEVRRLLHRELVHPDALNRFG-KTALQVMMFGSTAIALE-LLKQGASPNVQDT 66
Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
             TSP+  + R G                                   LD +K+L+++ A
Sbjct: 67  SGTSPVHDAARTGF----------------------------------LDTLKVLVEHGA 92
Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFL 874
           D+N  D  G +  H A Q  +  +V+FL
Sbjct: 93  DVNVPDGTGALPIHLAVQEGHTAVVSFL 120

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 262 LHSAILNSDIELVKLLLEKG-ANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSV 320
           L  A    D++ V+ LL +   +P A+ +   +TAL V  +  S  I   L   GA  S 
Sbjct: 12  LSGAAARGDVQEVRRLLHRELVHPDALNRF-GKTALQVM-MFGSTAIALELLKQGA--SP 67
Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
           NVQ+ +G +P+H A R   L+ +K+L++ GAD+N  +  G  P+  A+ +    V ++L 
Sbjct: 68  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 127
Query: 381 NHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKHI 415
               DL   +    T L +A Q G  ++V+ L  H+
Sbjct: 128 AES-DLHRRDARGLTPLELALQRGAQDLVDILQGHM 162

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 36/148 (24%)
Query: 727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           A+ RGD  ++ R L  E      L  F  +TAL    FG+    L+ LLK GA P++ D 
Sbjct: 15  AAARGDVQEVRRLLHRELVHPDALNRFG-KTALQVMMFGSTAIALE-LLKQGASPNVQDT 72
Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
             TSP+  + R G                                   LD +K+L+++ A
Sbjct: 73  SGTSPVHDAARTGF----------------------------------LDTLKVLVEHGA 98
Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFL 874
           D+N  D  G +  H A Q  +  +V+FL
Sbjct: 99  DVNVPDGTGALPIHLAVQEGHTAVVSFL 126

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           LL + R G  + V  L+   AD   +  K+GST LH AA +  L+++KLLL+  AD+ A+
Sbjct: 28  LLEAARAGQDDEVRILMANGADVAAKD-KNGSTPLHLAARNGHLEVVKLLLEAGADVXAQ 86
Query: 852 DKYGKIAFHSACQAKNWDIVTFL 874
           DK+GK AF  +    N D+   L
Sbjct: 87  DKFGKTAFDISIDNGNEDLAEIL 109

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 262 LHSAILNSDIELVKLLLEKG-ANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSV 320
           L  A    D++ V+ LL +   +P A+ +   +TAL V         ++LL   GA  S 
Sbjct: 14  LSGAAARGDVQEVRRLLHRELVHPDALNRF-GKTALQVMMFGSPAVALELL-KQGA--SP 69
Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
           NVQ+ +G +P+H A R   L+ +K+L++ GAD+N+ +  G  P+  AI +    V ++L 
Sbjct: 70  NVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLA 129
Query: 381 NHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKHINI 417
               DL   +    T L +A Q G   +++ L  H+ I
Sbjct: 130 PES-DLHHRDASGLTPLELARQRGAQNLMDILQGHMMI 166

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 36/148 (24%)
Query: 727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           A+ RGD  ++ R L  E      L  F  +TAL    FG+    L+ LLK GA P++ D 
Sbjct: 17  AAARGDVQEVRRLLHRELVHPDALNRFG-KTALQVMMFGSPAVALE-LLKQGASPNVQDA 74
Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
             TSP+  + R G                                   LD +K+L+++ A
Sbjct: 75  SGTSPVHDAARTGF----------------------------------LDTLKVLVEHGA 100
Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFL 874
           D+NA D  G +  H A +  +  +V+FL
Sbjct: 101 DVNALDSTGSLPIHLAIREGHSSVVSFL 128

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 262 LHSAILNSDIELVKLLLEKG-ANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSV 320
           L  A    D++ V+ LL +   +P A+ +   +TAL V         ++LL   GA  S 
Sbjct: 12  LSGAAARGDVQEVRRLLHRELVHPDALNRF-GKTALQVMMFGSPAVALELL-KQGA--SP 67
Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
           NVQ+ +G +P+H A R   L+ +K+L++ GAD+N+ +  G  P+  AI +    V ++L 
Sbjct: 68  NVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLA 127
Query: 381 NHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKHINI 417
               DL   +    T L +A Q G   +++ L  H+ I
Sbjct: 128 PES-DLHHRDASGLTPLELARQRGAQNLMDILQGHMMI 164

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 36/148 (24%)
Query: 727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           A+ RGD  ++ R L  E      L  F  +TAL    FG+    L+ LLK GA P++ D 
Sbjct: 15  AAARGDVQEVRRLLHRELVHPDALNRFG-KTALQVMMFGSPAVALE-LLKQGASPNVQDA 72
Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
             TSP+  + R G                                   LD +K+L+++ A
Sbjct: 73  SGTSPVHDAARTGF----------------------------------LDTLKVLVEHGA 98
Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFL 874
           D+NA D  G +  H A +  +  +V+FL
Sbjct: 99  DVNALDSTGSLPIHLAIREGHSSVVSFL 126

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 33/264 (12%)
Query: 179 QSSDSNSDKALEEELTN-------IFKKFDLLEHPEYLSHSQGYKALCWALQEK-----K 226
           Q S SN+++ +  EL+          +K+  L++P  L+  +   A    LQE      +
Sbjct: 20  QGSGSNTEEEIRMELSPDLISACLALEKY--LDNPNALTERELKVAYTTVLQEWLRLACR 77
Query: 227 TDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETD--TPLHSAILNSDIELVKLLLEKGANP 284
           +D    LV + +          L+Y   I +++  T LH ++ +++  +V+ LL+ G   
Sbjct: 78  SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCK 137
Query: 285 LAIEKSRNR--------TALHVAAIVESVDIVKLLFDYGAEKSVNVQ-NVAGLTPLHIAC 335
           +     +NR        TAL      + ++ V  LF  G   ++N + + AG T L +A 
Sbjct: 138 V---DKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG---NINAKASQAGQTALMLAV 191
Query: 336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN-HGCDLSVPEGE-R 393
               +++VK LL   AD+N  +DDG T L CA      E+   L+    CD+S+ + +  
Sbjct: 192 SHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGS 251
Query: 394 TALHMASQFGNLEMVNYLLKHINI 417
           TAL +A   G  E+ + L   +NI
Sbjct: 252 TALMVALDAGQSEIASMLYSRMNI 275

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 748 ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA-DPDILDLKDTSPLLSSCRQGL--YEIV 804
           + + + N  TAL+++    N  +++ LL +G    D  +    SP++ +    L   + +
Sbjct: 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDI 163
Query: 805 DTLLEYN--ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
           +T+L+     + N +  + G TAL  A  H ++D++K LL   AD+N +D  G  A   A
Sbjct: 164 ETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCA 223
Query: 863 CQAKNWDIVTFLL 875
           C+  + +I   LL
Sbjct: 224 CEHGHKEIAGLLL 236

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTN 815
           RTAL     GN  ++ + LL  GA+PD+ D    + +  + R G  + + TLLE+ AD N
Sbjct: 39  RTALQVMKLGNP-EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVN 97
Query: 816 LRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
           +     G+  LH AA    L +++ L+K+ A
Sbjct: 98  IED-NEGNLPLHLAAKEGHLRVVEFLVKHTA 127

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           EI   LL   A+ +L+  + G+  +H AA    LD ++ LL++ AD+N ED  G +  H 
Sbjct: 51  EIARRLLLRGANPDLKD-RTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHL 109
Query: 862 ACQAKNWDIVTFLLD-AGSNI 881
           A +  +  +V FL+    SN+
Sbjct: 110 AAKEGHLRVVEFLVKHTASNV 130

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTN 815
           RTAL     GN  ++ + LL  GA+PD+ D    + +  + R G  + + TLLE+ AD N
Sbjct: 39  RTALQVMKLGNP-EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN 97
Query: 816 LRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
           +     G+  LH AA    L +++ L+K+ A
Sbjct: 98  IED-NEGNLPLHLAAKEGHLRVVEFLVKHTA 127

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           EI   LL   A+ +L+  + G   +H AA    LD ++ LL++ AD+N ED  G +  H 
Sbjct: 51  EIARRLLLRGANPDLKD-RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHL 109
Query: 862 ACQAKNWDIVTFLLD-AGSNI 881
           A +  +  +V FL+    SN+
Sbjct: 110 AAKEGHLRVVEFLVKHTASNV 130

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTN 815
           RTAL     GN  ++ + LL  GA+PD+ D    + +  + R G  + + TLLE+ AD N
Sbjct: 39  RTALQVMKLGNP-EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN 97
Query: 816 LRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
           +     G+  LH AA    L +++ L+K+ A
Sbjct: 98  IED-NEGNLPLHLAAKEGHLRVVEFLVKHTA 127

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           EI   LL   A+ +L+  + G   +H AA    LD ++ LL++ AD+N ED  G +  H 
Sbjct: 51  EIARRLLLRGANPDLKD-RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHL 109
Query: 862 ACQAKNWDIVTFLLD-AGSNI 881
           A +  +  +V FL+    SN+
Sbjct: 110 AAKEGHLRVVEFLVKHTASNV 130

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 26/181 (14%)
Query: 259 DTPLHSAILNSDIELVKLLLEKGAN----PLAIEKSRNRTALHVAAIVESVDIVKLLFDY 314
           +T LH A L  ++E   +L+E        P+  E    +TALH+A I ++V++V+ L   
Sbjct: 38  ETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR 97
Query: 315 GAEKSVNVQNVA-----------GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTP 363
           GA  S                  G  PL  A      EIV++L++ GADI + +  G T 
Sbjct: 98  GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTV 157
Query: 364 LFCAIAQN----CLEVFNYLVNH--GCDLS----VPEGER-TALHMASQFGNLEMVNYLL 412
           L   I Q       +++N L+++  G  L     VP  +  T   +A   GN+ M  +L+
Sbjct: 158 LHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLM 217
Query: 413 K 413
           +
Sbjct: 218 Q 218

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 59/244 (24%)
Query: 362 TPLFCAIAQNCLEVFNYLVN-HGCDLSV--PEGERTALHMASQFGNLEMVNYLLKHININ 418
           +PL  A  +N ++  + L+   GC++      GE TALH+A+ + NLE    L++     
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGE-TALHIAALYDNLEAAMVLMEA---- 59
Query: 419 HQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYL- 477
              +  + P+T                       ++L +G TALH+A    N+ +V  L 
Sbjct: 60  -APELVFEPMT-----------------------SELYEGQTALHIAVINQNVNLVRALL 95
Query: 478 -------------VKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNF 524
                        V H   ++    G+ P+ FA      EI  LL++ GAD+  +     
Sbjct: 96  ARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGN 155
Query: 525 TCLHVAC-----EFASIEMVSFLLSHIGVN-------LQDNKGCTPLHCAIVGNQLEVFN 572
           T LH+        FA  +M + LLS+ G +       + +N+G TP   A V   + +F 
Sbjct: 156 TVLHILILQPNKTFAC-QMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQ 214
Query: 573 HLIN 576
           HL+ 
Sbjct: 215 HLMQ 218

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTN 815
           RTAL     GN  ++ + LL  GA+PD+ D    + +  + R G  + + TLLE+ AD N
Sbjct: 39  RTALQVMKLGNP-EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVN 97
Query: 816 LRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
           +     G+  LH AA    L +++ L+K+ A
Sbjct: 98  IED-NEGNLPLHLAAKEGHLRVVEFLVKHTA 127

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           EI   LL   A+ +L+  + G   +H AA   QLD ++ LL++ AD+N ED  G +  H 
Sbjct: 51  EIARRLLLRGANPDLKD-RTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHL 109
Query: 862 ACQAKNWDIVTFLLD-AGSNI 881
           A +  +  +V FL+    SN+
Sbjct: 110 AAKEGHLRVVEFLVKHTASNV 130

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTN 815
           RTAL     GN  ++ + LL  GA+PD+ D    + +  + R G  + + TLLE  AD N
Sbjct: 39  RTALQVMKLGNP-EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVN 97
Query: 816 LRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
           +     G+  LH AA    L +++ L+K+ A
Sbjct: 98  IED-NEGNLPLHLAAKEGHLRVVEFLVKHTA 127

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           LL S  +G +++V  ++ Y  D        G TALH A      +I+K L+++  ++NA 
Sbjct: 41  LLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAA 99
Query: 852 DKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVE 898
           D  G    H A    N  +  FL+++G+ +   T   M   + K  E
Sbjct: 100 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEE 146

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAE 851
           LL S  +G +++V  ++ Y  D        G TALH A      +I+K L+++  ++NA 
Sbjct: 41  LLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAA 99
Query: 852 DKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVE 898
           D  G    H A    N  +  FL+++G+ +   T   M   + K  E
Sbjct: 100 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEE 146

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 587 DSPLHLACATGNMDMITYAM-KYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDV 645
           D+PLH A   GN+  +   +     VN  +  G T L+ A   G  + V+ L    NI++
Sbjct: 74  DNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIEL 133
Query: 646 NHKTKDGSTALFFACYDKRLDLVEILLEANADVNL 680
           N + K G TAL  A +    D+V++LL   A  +L
Sbjct: 134 NQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDL 168

>pdb|3LJN|A Chain A, Ankyrin Repeat Protein From Leishmania Major Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 105/269 (39%), Gaps = 27/269 (10%)
Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           N   +HVAA     D V+ L + G   S  +QN  G T LH+AC+  C++  K L   G 
Sbjct: 20  NXEKIHVAARKGQTDEVRRLIETGV--SPTIQNRFGCTALHLACKFGCVDTAKYLASVG- 76
Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGN---LEMV 408
           +++S    G  P+  A+  N  ++   LV         EG +          N      V
Sbjct: 77  EVHSLW-HGQKPIHLAVXANKTDLVVALV---------EGAKERGQXPESLLNECDEREV 126
Query: 409 NYLLKHI-NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACY 467
           N +  H+ +   Q    W    C   G   LE    +++ GA   AK     T L  A  
Sbjct: 127 NEIGSHVKHCKGQTALHW----CVGLGPEYLEXIKILVQLGASPTAKDKADETPLXRAXE 182
Query: 468 FGNLAMVNYLVKHIDINSE------NDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMK 521
           F N   ++     +   S       N  G + +++AI  N  ++    ++ G DV  +  
Sbjct: 183 FRNREALDLXXDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAXRFVEXGIDVNXEDN 242
Query: 522 SNFTCLHVACEFASIEMVSFLLSHIGVNL 550
            +   L+++   A + +   LL    V L
Sbjct: 243 EHTVPLYLSVRAAXVLLTKELLQKTDVFL 271

>pdb|3LJN|A Chain A, Ankyrin Repeat Protein From Leishmania Major Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 35/258 (13%)
Query: 494 IYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDN 553
           I+ A +    +    L++ G    ++ +   T LH+AC+F  ++   +L S +G      
Sbjct: 24  IHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLAS-VGEVHSLW 82
Query: 554 KGCTPLHCAIVGNQLEVFNHLINS-----------------------NADITMYKNDSPL 590
            G  P+H A+  N+ ++   L+                          + +   K  + L
Sbjct: 83  HGQKPIHLAVXANKTDLVVALVEGAKERGQXPESLLNECDEREVNEIGSHVKHCKGQTAL 142
Query: 591 HLACATGN--MDMITYAMKYFDVNIENDIG-ETPLHVAVSHGCLEAVKFLLNT----KNI 643
           H     G   ++ I   ++        D   ETPL  A      EA+    +T     ++
Sbjct: 143 HWCVGLGPEYLEXIKILVQLGASPTAKDKADETPLXRAXEFRNREALDLXXDTVPSKSSL 202
Query: 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYT-PLYTALMKDPSLDIIK 702
            +++  K G++ L +A      D+    +E   DVN  D  +T PLY ++     L   +
Sbjct: 203 RLDYANKQGNSHLHWAILINWEDVAXRFVEXGIDVNXEDNEHTVPLYLSVRAAXVLLTKE 262
Query: 703 MLVKYGADVNLTNEACYY 720
           +L K   DV L  +AC Y
Sbjct: 263 LLQK--TDVFLI-QACPY 277

>pdb|3LJN|A Chain A, Ankyrin Repeat Protein From Leishmania Major Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 104/289 (35%), Gaps = 61/289 (21%)
Query: 585 KNDSPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNI 643
           +N   +H+A   G  D +   ++      I+N  G T LH+A   GC++  K+L +   +
Sbjct: 19  ENXEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV 78
Query: 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKM 703
              H    G   +  A    + DLV  L+E   +     G           +  ++ I  
Sbjct: 79  ---HSLWHGQKPIHLAVXANKTDLVVALVEGAKE----RGQXPESLLNECDEREVNEIGS 131
Query: 704 LVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAA 763
            VK+          C   T LH+    G                                
Sbjct: 132 HVKH----------CKGQTALHWCVGLGP------------------------------- 150
Query: 764 FGNNLDLLKFLLKAGADPDILDLKDTSPLLSSC----RQGLYEIVDTLLEYNADTNLR-- 817
               L+ +K L++ GA P   D  D +PL  +     R+ L    DT+    + ++LR  
Sbjct: 151 --EYLEXIKILVQLGASPTAKDKADETPLXRAXEFRNREALDLXXDTV---PSKSSLRLD 205
Query: 818 -TIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQA 865
              K G++ LH A   N  D+    ++   D+N ED    +  + + +A
Sbjct: 206 YANKQGNSHLHWAILINWEDVAXRFVEXGIDVNXEDNEHTVPLYLSVRA 254

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 587 DSPLHLACATGNMDMIT-YAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDV 645
           D     A   G++D +  Y  K  DVN   + G  PLH A   G LE ++FLL  K  D+
Sbjct: 8   DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADI 66
Query: 646 NHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
           N   K   T L  A Y+  +  V++LL   AD
Sbjct: 67  NAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 98

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 726 YASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD 785
           +A   GD +++  ++ +  + + TL     R  L++AA    L++L+FLL  GAD +  D
Sbjct: 13  WALKNGDLDEVKDYVAKGEDVNRTLEG--GRKPLHYAADCGQLEILEFLLLKGADINAPD 70
Query: 786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLR 817
               +PLLS+  +G    V  LL   AD  ++
Sbjct: 71  KHHITPLLSAVYEGHVSCVKLLLSKGADKTVK 102

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 587 DSPLHLACATGNMDMIT-YAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDV 645
           D     A   G++D +  Y  K  DVN   + G  PLH A   G LE ++FLL  K  D+
Sbjct: 3   DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADI 61
Query: 646 NHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
           N   K   T L  A Y+  +  V++LL   AD
Sbjct: 62  NAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 93

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 726 YASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD 785
           +A   GD +++  ++ +  + + TL     R  L++AA    L++L+FLL  GAD +  D
Sbjct: 8   WALKNGDLDEVKDYVAKGEDVNRTLEG--GRKPLHYAADCGQLEILEFLLLKGADINAPD 65
Query: 786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK 843
               +PLLS+  +G    V  LL   AD  ++    G TAL   A  NQ   IK LL+
Sbjct: 66  KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKG-PDGLTALE--ATDNQ--AIKALLQ 118

>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold Length = 135

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIF 506
             D+ A++ DGTT L LA       M+  L+  H D+N+ +DLGK+ +++A   N+++  
Sbjct: 5   ATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAA 64
Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
            +LLK GA+  ++     T L +A    S E    LL H
Sbjct: 65  VVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDH 103

>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp Length = 229

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 373 LEVFNYLVNHGCDLSVPEGER-TALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC 430
           LEV    V    D S P  E  TALH A    N  +V++L+    N+N  D  GWTPL C
Sbjct: 34  LEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHC 93
Query: 431 SIKGQASLEVFHSIIEAGADIKA-KLMDGTTAL 462
           +     ++ +  ++++ GA I A  L DG TA 
Sbjct: 94  AASCNDTV-ICMALVQHGAAIFATTLSDGATAF 125

>pdb|1D9S|A Chain A, Tumor Suppressor P15(Ink4b) Structure By Comparative Modeling And Nmr Data Length = 136

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 258 TDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAE 317
           +D  L +A     +E V+ LLE GA+P A+ +   R  + V  ++ S  + +LL  +GAE
Sbjct: 12  SDAGLATAAARGQVETVRQLLEAGADPNALNRF-GRRPIQV-MMMGSAQVAELLLLHGAE 69
Query: 318 KSVNVQNVAGLT-PLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVF 376
              N  + A LT P+H A R   L+ + +L   GA ++  +  G  P+  A  Q   ++ 
Sbjct: 70  P--NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIA 127
Query: 377 NYL 379
            YL
Sbjct: 128 RYL 130

>pdb|3UI2|A Chain A, Crystal Structure Of The Cpsrp54 Tail Bound To Cpsrp43 Length = 244

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 780 DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839
           D D +D    + LL     G  + V  L E  AD + R ++ G TALH AA + + ++++
Sbjct: 69  DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVE 128
Query: 840 LLLKYNADINAEDKYGKIAFHSA 862
            L++  ADI  ED+ G  A   A
Sbjct: 129 ALVELGADIEVEDERGLTALELA 151

>pdb|3DEO|A Chain A, Structural Basis For Specific Substrate Recognition By The Chloroplast Signal Recognition Particle Protein Cpsrp43 Length = 183

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 780 DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839
           D D +D    + LL     G  + V  L E  AD + R ++ G TALH AA + + ++++
Sbjct: 68  DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVE 127
Query: 840 LLLKYNADINAEDKYGKIAFHSA 862
            L++  ADI  ED+ G  A   A
Sbjct: 128 ALVELGADIEVEDERGLTALELA 150

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1011
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-122
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-121
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-121
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-117
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-84
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-75
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-55
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-92
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-88
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-87
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-78
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-30
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-86
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-85
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-80
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	9e-80
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-71
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-50
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-42
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-32
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-80
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-67
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	8e-67
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-60
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-78
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-73
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-71
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-63
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-54
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-29
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-24
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-76
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-70
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-66
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-66
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-66
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-61
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-40
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-37
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	9e-26
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-23
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-16
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-13
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-74
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-70
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-66
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	7e-66
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-65
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-57
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	6e-57
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-26
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-24
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	7e-73
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-72
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-69
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-67
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-65
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	8e-65
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	7e-58
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-47
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	6e-39
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-28
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-69
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-64
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-57
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-55
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	8e-69
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	7e-60
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-59
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-59
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-58
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-39
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-68
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-67
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-63
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-59
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	9e-59
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-57
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-40
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-67
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	9e-65
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-63
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	7e-61
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	7e-61
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	8e-61
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-55
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-33
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-27
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-64
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-63
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-58
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-55
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-40
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	6e-63
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	9e-56
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-55
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-53
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-52
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-50
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-45
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-42
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	6e-40
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-61
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-60
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-60
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-58
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-56
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-53
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-53
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-47
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-47
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-60
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-55
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-54
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-48
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-47
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-47
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-42
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-27
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-56
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-55
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-49
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-45
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-44
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-40
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-25
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-14
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-54
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-52
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-46
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-45
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-45
3hra_A	201	Ankyrin repeat family protein; structural protein;	7e-45
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-36
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-34
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-29
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-52
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-49
3v30_A	172	DNA-binding protein rfxank; structural genomics co	9e-49
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-43
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-42
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-41
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-33
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-33
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-52
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-39
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-37
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	6e-37
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-34
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-34
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-50
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-50
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-46
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-45
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	6e-42
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	9e-40
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-37
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-36
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-26
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-17
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-07
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-50
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-49
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	5e-42
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-40
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-37
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-34
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-29
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	8e-22
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-13
2rfa_A	232	Transient receptor potential cation channel subfa	2e-50
2rfa_A	232	Transient receptor potential cation channel subfa	9e-47
2rfa_A	232	Transient receptor potential cation channel subfa	7e-46
2rfa_A	232	Transient receptor potential cation channel subfa	4e-43
2rfa_A	232	Transient receptor potential cation channel subfa	3e-42
2rfa_A	232	Transient receptor potential cation channel subfa	4e-27
2rfa_A	232	Transient receptor potential cation channel subfa	8e-27
2rfa_A	232	Transient receptor potential cation channel subfa	3e-12
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-49
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-47
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	8e-45
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	4e-44
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-38
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	8e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-49
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-49
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-46
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-46
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-46
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-43
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-41
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-40
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-39
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	7e-25
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-10
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-49
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-48
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	6e-44
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-44
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	8e-43
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-41
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-39
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-39
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-35
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	7e-30
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-48
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	9e-47
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-46
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-44
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-43
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	8e-43
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-40
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-38
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-37
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-33
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-11
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-48
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-45
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-43
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-41
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-40
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-39
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-15
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-46
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	8e-44
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-40
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-38
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-36
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-36
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-35
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-46
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-42
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-42
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-39
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-37
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-34
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	6e-33
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-31
2etb_A	256	Transient receptor potential cation channel subfam	1e-45
2etb_A	256	Transient receptor potential cation channel subfam	4e-35
2etb_A	256	Transient receptor potential cation channel subfam	1e-33
2etb_A	256	Transient receptor potential cation channel subfam	1e-32
2etb_A	256	Transient receptor potential cation channel subfam	1e-21
2etb_A	256	Transient receptor potential cation channel subfam	1e-12
2pnn_A	273	Transient receptor potential cation channel subfa	3e-44
2pnn_A	273	Transient receptor potential cation channel subfa	2e-39
2pnn_A	273	Transient receptor potential cation channel subfa	6e-35
2pnn_A	273	Transient receptor potential cation channel subfa	2e-34
2pnn_A	273	Transient receptor potential cation channel subfa	1e-33
2pnn_A	273	Transient receptor potential cation channel subfa	4e-33
2pnn_A	273	Transient receptor potential cation channel subfa	4e-26
2pnn_A	273	Transient receptor potential cation channel subfa	3e-19
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	9e-44
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-40
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-37
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-36
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-35
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-32
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-24
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-13
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-42
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-42
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-38
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-37
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-37
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	4e-34
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-34
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-33
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-29
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-42
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-39
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-32
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-31
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-31
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-30
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	8e-30
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-29
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-18
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-41
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-37
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-36
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-36
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-34
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-31
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-25
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-08
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-41
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-41
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-40
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	7e-39
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-37
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-36
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	9e-36
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-33
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-21
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	8e-12
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-39
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-36
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-32
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-32
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-27
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-19
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-06
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-39
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-29
3jxi_A	260	Vanilloid receptor-related osmotically activated p	8e-29
3jxi_A	260	Vanilloid receptor-related osmotically activated p	7e-27
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-23
3jxi_A	260	Vanilloid receptor-related osmotically activated p	7e-17
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-38
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-35
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-33
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-33
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-33
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-32
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-32
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-30
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-29
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-28
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-23
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-37
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-37
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-36
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	8e-33
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-32
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-30
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-28
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-28
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-28
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-27
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-27
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-17
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	6e-37
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	7e-35
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-32
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-31
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-30
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-29
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-29
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-25
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-18
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-35
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	5e-35
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-34
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-34
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-33
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-32
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-31
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	7e-28
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-17
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-35
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-34
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	9e-32
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-30
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	8e-27
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-26
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-24
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-24
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-21
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-11
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-34
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	9e-33
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-30
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-20
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-16
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	4e-12
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-08
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	6e-34
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-33
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-32
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-29
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-28
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-28
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-28
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-26
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-24
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-24
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-22
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	9e-18
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	9e-33
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-31
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-30
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	8e-29
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-27
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	5e-27
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	6e-25
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-24
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-18
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-08
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-28
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-27
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-24
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	9e-24
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-23
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-22
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-21
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-20
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	6e-19
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-18
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-18
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-18
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-16
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-07
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-27
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-26
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-24
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-23
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-21
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-20
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-20
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-20
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	8e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	8e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	8e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	8e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	8e-16
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-14
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	6e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-09
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-09
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-07
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	6e-07
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-06
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-06
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	8e-15
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-12
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	5e-10
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-07
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-06
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	9e-15
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	3e-10
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	8e-08
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	7e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-10
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	6e-10
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	7e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-07
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-07
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	9e-07
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-06
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	5e-06
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	9e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	2e-04

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  380 bits (978), Expect = e-122
 Identities = 128/510 (25%), Positives = 197/510 (38%), Gaps = 83/510 (16%)

Query: 315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE 374
           G          +GLTPLH+A     L IVK LL +GA  N  N    TPL  A      E
Sbjct: 4   GIS--GGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTE 61

Query: 375 VFNYLVNHGCDL-SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSI 432
           V  YL+ +   + +  + ++T LH A++ G+  MV  LL++  N N     G TPL    
Sbjct: 62  VAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPL---- 117

Query: 433 KGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGK 491
                                         H+A   G++  V  L++           G 
Sbjct: 118 ------------------------------HIAAREGHVETVLALLEKEASQACMTKKGF 147

Query: 492 TPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNL 550
           TP++ A K   + +  LLL+  A      K+  T LHVA    ++++V  LL      + 
Sbjct: 148 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS 207

Query: 551 QDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFD 610
               G TPLH A   NQ+EV   L+                                   
Sbjct: 208 PAWNGYTPLHIAAKQNQVEVARSLLQYGGSA----------------------------- 238

Query: 611 VNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEI 670
            N E+  G TPLH+A   G  E V  LL+ K  + N   K G T L     +  + + ++
Sbjct: 239 -NAESVQGVTPLHLAAQEGHAEMVALLLS-KQANGNLGNKSGLTPLHLVAQEGHVPVADV 296

Query: 671 LLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASY 729
           L++    V+      YTPL+ A     ++ ++K L+++ ADVN   +     +PLH A+ 
Sbjct: 297 LIKHGVMVDATTRMGYTPLHVASHYG-NIKLVKFLLQHQADVNAKTK--LGYSPLHQAAQ 353

Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
           +G   DI   L++   A     + +  T L  A     + +   L     +   + + D 
Sbjct: 354 QG-HTDIVTLLLKN-GASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSD- 410

Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTI 819
                  R    E VD +L+ + D     I
Sbjct: 411 -----KHRMSFPETVDEILDVSEDEGEELI 435

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  376 bits (967), Expect = e-121
 Identities = 113/430 (26%), Positives = 189/430 (43%), Gaps = 24/430 (5%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPLH A     + +VK LL++GA+P      +  T LH+AA     ++ K L    A+  
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNV-KVETPLHMAARAGHTEVAKYLLQNKAK-- 72

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           VN +     TPLH A R     +VK+LL+  A+ N     G TPL  A  +  +E    L
Sbjct: 73  VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL 132

Query: 380 VNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQA 436
           +      +    +  T LH+A+++G + +   LL+   + N   K+G TPL         
Sbjct: 133 LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHN-- 190

Query: 437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIY 495
           +L++   ++  G    +   +G T LH+A     + +   L+++    N+E+  G TP++
Sbjct: 191 NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLH 250

Query: 496 FAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNK 554
            A +  H E+  LLL   A+  +  KS  T LH+  +   + +   L+ H + V+     
Sbjct: 251 LAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRM 310

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAMKY-FDV 611
           G TPLH A     +++   L+   AD+        SPLH A   G+ D++T  +K     
Sbjct: 311 GYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP 370

Query: 612 NIENDIGETPLHVAVSHGCLEAVKFLLNT--KNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           N  +  G TPL +A   G +     L     +   V    K   +           + V+
Sbjct: 371 NEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF---------PETVD 421

Query: 670 ILLEANADVN 679
            +L+ + D  
Sbjct: 422 EILDVSEDEG 431

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  375 bits (965), Expect = e-121
 Identities = 130/459 (28%), Positives = 195/459 (42%), Gaps = 48/459 (10%)

Query: 280 KGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKC 339
            G +     +S   T LHVA+ +  + IVK L   GA    NV NV   TPLH+A R   
Sbjct: 3   PGISGGGGGES-GLTPLHVASFMGHLPIVKNLLQRGAS--PNVSNVKVETPLHMAARAGH 59

Query: 340 LEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHM 398
            E+ K LL   A +N+   D  TPL CA       +   L+ +  + ++      T LH+
Sbjct: 60  TEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHI 119

Query: 399 ASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLM 456
           A++ G++E V  LL+   +     K G+TPL   +  G   + V   ++E  A   A   
Sbjct: 120 AAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYG--KVRVAELLLERDAHPNAAGK 177

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           +G T LH+A +  NL +V  L+      +S    G TP++ A K N +E+   LL+ G  
Sbjct: 178 NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS 237

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHL 574
              +     T LH+A +    EMV+ LLS     NL +  G TPLH       + V + L
Sbjct: 238 ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 297

Query: 575 INSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAV 634
           I     +                              +    +G TPLHVA  +G ++ V
Sbjct: 298 IKHGVMV------------------------------DATTRMGYTPLHVASHYGNIKLV 327

Query: 635 KFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALM 693
           KFLL     DVN KTK G + L  A      D+V +LL+  A  N       TPL  A  
Sbjct: 328 KFLLQ-HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKR 386

Query: 694 KDPSLDIIKML---VKYGADVNLTNEACYYMTPLHYASY 729
               + +  +L       + V ++++  + M+       
Sbjct: 387 LG-YISVTDVLKVVTDETSFVLVSDK--HRMSFPETVDE 422

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  366 bits (943), Expect = e-117
 Identities = 122/450 (27%), Positives = 187/450 (41%), Gaps = 43/450 (9%)

Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIF 506
           G         G T LH+A + G+L +V  L++     N  N   +TP++ A +  H E+ 
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVA 63

Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVG 565
             LL+  A V  K K + T LH A       MV  LL +    NL    G TPLH A   
Sbjct: 64  KYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAARE 123

Query: 566 NQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVA 625
             +E    L+   A                                      G TPLHVA
Sbjct: 124 GHVETVLALLEKEASQ------------------------------ACMTKKGFTPLHVA 153

Query: 626 VSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT- 684
             +G +   + LL  ++   N   K+G T L  A +   LD+V++LL      +      
Sbjct: 154 AKYGKVRVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNG 212

Query: 685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEEC 744
           YTPL+ A  ++  +++ + L++YG   N  +     +TPLH A+  G   ++   L+ + 
Sbjct: 213 YTPLHIAAKQN-QVEVARSLLQYGGSANAESV--QGVTPLHLAAQEG-HAEMVALLLSK- 267

Query: 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIV 804
            A+  L N +  T L+  A   ++ +   L+K G   D       +PL  +   G  ++V
Sbjct: 268 QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV 327

Query: 805 DTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQ 864
             LL++ AD N +T K G + LH AA     DI+ LLLK  A  N     G      A +
Sbjct: 328 KFLLQHQADVNAKT-KLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKR 386

Query: 865 AKNWDIVTFL---LDAGSNIEKATKYRMTF 891
                +   L    D  S +  + K+RM+F
Sbjct: 387 LGYISVTDVLKVVTDETSFVLVSDKHRMSF 416

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  279 bits (716), Expect = 1e-84
 Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 23/330 (6%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G+  L  A +E   +    L++K      + K           +  TPLH A     + +
Sbjct: 113 GHTPLHIAAREGHVETVLALLEKEASQACMTK-----------KGFTPLHVAAKYGKVRV 161

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            +LLLE+ A+P A  K+   T LHVA    ++DIVKLL   G   S +     G TPLHI
Sbjct: 162 AELLLERDAHPNAAGKN-GLTPLHVAVHHNNLDIVKLLLPRGG--SPHSPAWNGYTPLHI 218

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGE 392
           A ++  +E+ + LL  G   N+ +  G TPL  A  +   E+   L++   + ++  +  
Sbjct: 219 AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG 278

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGAD 450
            T LH+ +Q G++ + + L+KH + ++   + G+TPL   S  G  ++++   +++  AD
Sbjct: 279 LTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYG--NIKLVKFLLQHQAD 336

Query: 451 IKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLL 509
           + AK   G + LH A   G+  +V  L+K+    N  +  G TP+  A +  ++ + ++L
Sbjct: 337 VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396

Query: 510 LKL---GADVAVKMKSNFTCLHVACEFASI 536
             +    + V V  K   +      E   +
Sbjct: 397 KVVTDETSFVLVSDKHRMSFPETVDEILDV 426

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  253 bits (649), Expect = 3e-75
 Identities = 85/309 (27%), Positives = 150/309 (48%), Gaps = 32/309 (10%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G+  L  A +  K  +A+LL+++    N   K              TPLH A+ ++++++
Sbjct: 146 GFTPLHVAAKYGKVRVAELLLERDAHPNAAGK-----------NGLTPLHVAVHHNNLDI 194

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           VKLLL +G +P +   +   T LH+AA    V++ + L  YG     N ++V G+TPLH+
Sbjct: 195 VKLLLPRGGSPHSPAWN-GYTPLHIAAKQNQVEVARSLLQYGGS--ANAESVQGVTPLHL 251

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGE 392
           A +    E+V +LL K A+ N GN  G TPL     +  + V + L+ HG  +       
Sbjct: 252 AAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMG 311

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPL-TCSIKGQASLEVFHSIIEAGAD 450
            T LH+AS +GN+++V +LL+H  ++N + K G++PL   + +G    ++   +++ GA 
Sbjct: 312 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG--HTDIVTLLLKNGAS 369

Query: 451 IKAKLMDGTTALHLACYFGNLAMVNYLVKHI----DINSENDLGKTPIYFAIKNNHLEIF 506
                 DGTT L +A   G +++ + L         +   +    +           E  
Sbjct: 370 PNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMS---------FPETV 420

Query: 507 NLLLKLGAD 515
           + +L +  D
Sbjct: 421 DEILDVSED 429

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  197 bits (503), Expect = 3e-55
 Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 29/249 (11%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           GY  L  A ++ + ++A+ L+  G   N               +  TPLH A      E+
Sbjct: 212 GYTPLHIAAKQNQVEVARSLLQYGGSANAESV-----------QGVTPLHLAAQEGHAEM 260

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           V LLL K AN     KS   T LH+ A    V +  +L  +G    V+     G TPLH+
Sbjct: 261 VALLLSKQANGNLGNKS-GLTPLHLVAQEGHVPVADVLIKHGVM--VDATTRMGYTPLHV 317

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE- 392
           A     +++VK LL   AD+N+    G +PL  A  Q   ++   L+ +G   +    + 
Sbjct: 318 ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDG 377

Query: 393 RTALHMASQFGNLEMVNYLLKHI----NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
            T L +A + G + + + L         +   DK   +            E    I++  
Sbjct: 378 TTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFP----------ETVDEILDVS 427

Query: 449 ADIKAKLMD 457
            D   +L+ 
Sbjct: 428 EDEGEELIS 436

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  297 bits (764), Expect = 1e-92
 Identities = 66/382 (17%), Positives = 130/382 (34%), Gaps = 41/382 (10%)

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
               +   +  +H+A R+   + V+ L++ G      N  GCT L  A    C++   YL
Sbjct: 13  RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYL 72

Query: 380 VNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLE 439
            + G   S+  G +  +H+A      ++V  L     +    + G  P +       +  
Sbjct: 73  ASVGEVHSLWHG-QKPIHLAVMANKTDLVVAL-----VEGAKERGQMPESL-----LNEC 121

Query: 440 VFHSIIEAGADIKAKLMDGTTALHLACYFGN--LAMVNYLVKH-IDINSENDLGKTPIYF 496
               + E G+ +K     G TALH     G   L M+  LV+      +++   +TP+  
Sbjct: 122 DEREVNEIGSHVKHC--KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMR 179

Query: 497 AIKNNHLEIFNLLLKL-----GADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNL 550
           A++  + E  +L++          +    K   + LH A      ++    +   I VN+
Sbjct: 180 AMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM 239

Query: 551 QDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFD 610
           +DN+   PL+ ++    + +   L+             P H                   
Sbjct: 240 EDNEHTVPLYLSVRAAMVLLTKELLQKTDVFL--IQACPYHNGT---------------T 282

Query: 611 VNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEI 670
           V  +  +    +  A      E ++ L   K  +V      G+             +  +
Sbjct: 283 VLPDRVVWLDFVPAAADPSKQEVLQLLQE-KLDEVVRSLNTGAGGAVKRKKKAAPAVKRM 341

Query: 671 LLEANADVNLGDGT-YTPLYTA 691
            L  +A V     +       +
Sbjct: 342 KLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  287 bits (736), Expect = 1e-88
 Identities = 63/412 (15%), Positives = 132/412 (32%), Gaps = 82/412 (19%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             +H A      + V+ L+E G +                                    
Sbjct: 22  EKIHVAARKGQTDEVRRLIETGVS------------------------------------ 45

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
             +QN  G T LH+AC+  C++  K L   G   +     G  P+  A+  N  ++   L
Sbjct: 46  PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS--LWHGQKPIHLAVMANKTDLVVAL 103

Query: 380 VNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPL-TCSIKGQASL 438
           V    +       +    + ++    E+       I  + +   G T L  C   G   L
Sbjct: 104 VEGAKER-----GQMPESLLNECDEREVNE-----IGSHVKHCKGQTALHWCVGLGPEYL 153

Query: 439 EVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH------IDINSENDLGKT 492
           E+   +++ GA   AK     T L  A  F N   ++ ++        + ++  N  G +
Sbjct: 154 EMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213

Query: 493 PIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH----IGV 548
            +++AI  N  ++    +++G DV ++   +   L+++   A + +   LL      +  
Sbjct: 214 HLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQ 273

Query: 549 NLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKY 608
               + G T L   +V                         +  A      +++    + 
Sbjct: 274 ACPYHNGTTVLPDRVVWL---------------------DFVPAAADPSKQEVLQLLQEK 312

Query: 609 -FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFA 659
             +V    + G                +  L   +  V  +++  + +   +
Sbjct: 313 LDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLA-PSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  283 bits (727), Expect = 3e-87
 Identities = 64/424 (15%), Positives = 140/424 (33%), Gaps = 68/424 (16%)

Query: 469 GNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLH 528
           G  +M ++    ++    +D     I+ A +    +    L++ G    ++ +   T LH
Sbjct: 1   GPGSMTDF--PKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALH 58

Query: 529 VACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDS 588
           +AC+F  ++   +L S  G       G  P+H A++ N+ ++   L+    +    +   
Sbjct: 59  LACKFGCVDTAKYLASV-GEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKE----RGQM 113

Query: 589 PLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGC--LEAVKFLLNTKNIDVN 646
           P  L       ++          ++++  G+T LH  V  G   LE +K L+        
Sbjct: 114 PESLLNECDEREVNEI-----GSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ-LGASPT 167

Query: 647 HKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVK 706
            K K   T L  A   +  + ++++++     +                           
Sbjct: 168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKS--------------------------- 200

Query: 707 YGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGN 766
               ++  N+     + LH+A       D+A   V E   D+ + +  +   L  +    
Sbjct: 201 -SLRLDYANK--QGNSHLHWAILIN-WEDVAMRFV-EMGIDVNMEDNEHTVPLYLSVRAA 255

Query: 767 NLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTAL 826
            + L K LL+      I                          +N  T L         +
Sbjct: 256 MVLLTKELLQKTDVFLIQACPY---------------------HNGTTVLPDRVVWLDFV 294

Query: 827 HTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886
             AA  ++ ++++LL +   ++      G        +     +    L   + +   ++
Sbjct: 295 PAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSR 354

Query: 887 YRMT 890
            R  
Sbjct: 355 SRAR 358

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  260 bits (667), Expect = 1e-78
 Identities = 55/374 (14%), Positives = 124/374 (33%), Gaps = 55/374 (14%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
             + +  A ++ +TD  + L++ GV   + ++              T LH A     ++ 
Sbjct: 20  NMEKIHVAARKGQTDEVRRLIETGVSPTIQNR-----------FGCTALHLACKFGCVDT 68

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            K L   G           +  +H+A +    D+V  L +   E+        G  P  +
Sbjct: 69  AKYLASVGEV---HSLWHGQKPIHLAVMANKTDLVVALVEGAKER--------GQMPESL 117

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA--QNCLEVFNYLVNHGCDLSVP-E 390
                  E+ +         +  +  G T L   +      LE+   LV  G   +   +
Sbjct: 118 LNECDEREVNE------IGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK 171

Query: 391 GERTALHMASQFGNLEMVNYLLKH------ININHQDKDGWTPLTC-SIKGQASLEVFHS 443
            + T L  A +F N E ++ ++        + +++ +K G + L    +      +V   
Sbjct: 172 ADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW--EDVAMR 229

Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH--------------IDINSENDL 489
            +E G D+  +  + T  L+L+     + +   L++                 +  +  +
Sbjct: 230 FVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVV 289

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGV 548
               +  A   +  E+  LL +   +V   + +         + A+  +    L+    V
Sbjct: 290 WLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPV 349

Query: 549 NLQDNKGCTPLHCA 562
             +          +
Sbjct: 350 RTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  121 bits (306), Expect = 6e-30
 Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 27/169 (15%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G   L WA+     D+A   V+ G+ +N+ D            E   PL+ ++  + + L
Sbjct: 211 GNSHLHWAILINWEDVAMRFVEMGIDVNMEDN-----------EHTVPLYLSVRAAMVLL 259

Query: 274 VKLLLEKGANPLAIEKSRN------------RTALHVAAIVESVDIVKLLFDYGAEKSVN 321
            K LL+K    L      +               +  AA     ++++LL +   E  V 
Sbjct: 260 TKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDE--VV 317

Query: 322 VQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ 370
                G        ++    + ++ L   A + + +         A+++
Sbjct: 318 RSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSS--AVSK 364

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  279 bits (716), Expect = 8e-86
 Identities = 88/376 (23%), Positives = 152/376 (40%), Gaps = 36/376 (9%)

Query: 229 IAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIE 288
            A  L D      L  +           + D  L +A   ++ +L+ LL     N  A +
Sbjct: 6   SALDLADPSAKAVLTGE----------YKKDELLEAARSGNEEKLMALLTPLNVNCHASD 55

Query: 289 KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLD 348
             R  T LH+AA    V IV+LL  +GA+  V+ ++  GL PLH AC     E+ ++LL 
Sbjct: 56  G-RKSTPLHLAAGYNRVRIVQLLLQHGAD--VHAKDKGGLVPLHNACSYGHYEVTELLLK 112

Query: 349 KGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEM 407
            GA +N+ +    TPL  A ++N +EV + L++HG D ++     ++A+ MA      E 
Sbjct: 113 HGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRER 172

Query: 408 VNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLAC- 466
           + Y             G + L  + +    L      +        +     TALH A  
Sbjct: 173 LTYEF----------KGHSLLQAAREAD--LAKVKKTLALEIINFKQPQSHETALHCAVA 220

Query: 467 --YFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSN 523
             +     +   L++   ++N +N    TP++ A +  H ++  +L K GA +       
Sbjct: 221 SLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLG 280

Query: 524 FTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADIT 582
            T LH A     ++    LLS+    ++   +G T           E    +++ +  + 
Sbjct: 281 QTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN-----EAVQQILSESTPMR 335

Query: 583 MYKNDSPLHLACATGN 598
               D  L  A   G+
Sbjct: 336 TSDVDYRLLEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  277 bits (710), Expect = 7e-85
 Identities = 78/401 (19%), Positives = 132/401 (32%), Gaps = 63/401 (15%)

Query: 341 EIVKILLDKGADINSGNDDGCTPLFCAIAQ-NCLEVFNYLVNHGCDLSVPEGE-RTALHM 398
           +    L D  A      +     L  A    N  ++   L     +    +G   T LH+
Sbjct: 5   KSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHL 64

Query: 399 ASQFGNLEMVNYLLKH-ININHQDKDGWTPL-TCSIKGQASLEVFHSIIEAGADIKAKLM 456
           A+ +  + +V  LL+H  +++ +DK G  PL      G    EV   +++ GA + A  +
Sbjct: 65  AAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYG--HYEVTELLLKHGACVNAMDL 122

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
              T LH A     + + + L+ H  D    N  GK+ +  A      E           
Sbjct: 123 WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEF----- 177

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIV---GNQLEVFN 572
                    + L  A E    ++   L   I    Q     T LHCA+      + +V  
Sbjct: 178 ------KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAE 231

Query: 573 HLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLE 632
            L+   A++                              N +N    TPLHVA      +
Sbjct: 232 LLLRKGANV------------------------------NEKNKDFMTPLHVAAERAHND 261

Query: 633 AVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTA 691
            ++ L       +N     G TAL  A     L    +LL   +D ++     +T     
Sbjct: 262 VMEVLHK-HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG 320

Query: 692 LMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD 732
                  + ++ ++     +  ++        L  AS  GD
Sbjct: 321 ------NEAVQQILSESTPMRTSDV----DYRLLEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  264 bits (678), Expect = 2e-80
 Identities = 80/415 (19%), Positives = 139/415 (33%), Gaps = 70/415 (16%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTP-IYFAIKNNHLEIFNLLLKLGAD 515
            G +AL L                       +  K   +  A   N  ++  LL  L  +
Sbjct: 3   FGKSALDL------------ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVN 50

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHL 574
                    T LH+A  +  + +V  LL H   V+ +D  G  PLH A      EV   L
Sbjct: 51  CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELL 110

Query: 575 INSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAV 634
           +   A +                              N  +    TPLH A S   +E  
Sbjct: 111 LKHGACV------------------------------NAMDLWQFTPLHEAASKNRVEVC 140

Query: 635 KFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMK 694
             LL+    D       G +A+  A   +  + +    + +          + L  A   
Sbjct: 141 SLLLS-HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGH----------SLLQAAREA 189

Query: 695 DPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCN--DIARFLVEECNADITLRN 752
           D  L  +K  +          +   + T LH A          +A  L+ +  A++  +N
Sbjct: 190 D--LAKVKKTLALEIINF--KQPQSHETALHCAVASLHPKRKQVAELLLRK-GANVNEKN 244

Query: 753 FNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNA 812
            +  T L+ AA   + D+++ L K GA  + LD    + L  +   G  +    LL Y +
Sbjct: 245 KDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS 304

Query: 813 DTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN 867
           D ++ +   G TA          + ++ +L  +  +   D   ++    A +A +
Sbjct: 305 DPSIIS-LQGFTAAQMGN-----EAVQQILSESTPMRTSDVDYRL--LEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  262 bits (673), Expect = 9e-80
 Identities = 85/340 (25%), Positives = 133/340 (39%), Gaps = 37/340 (10%)

Query: 228 DIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAI 287
            +  LL    V  +  D               TPLH A   + + +V+LLL+ GA+  A 
Sbjct: 39  KLMALLTPLNVNCHASDG-----------RKSTPLHLAAGYNRVRIVQLLLQHGADVHAK 87

Query: 288 EKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILL 347
           +K      LH A      ++ +LL  +GA   VN  ++   TPLH A  +  +E+  +LL
Sbjct: 88  DKG-GLVPLHNACSYGHYEVTELLLKHGAC--VNAMDLWQFTPLHEAASKNRVEVCSLLL 144

Query: 348 DKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEM 407
             GAD    N  G + +  A      E   Y                +L  A++  +L  
Sbjct: 145 SHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGH-----------SLLQAAREADLAK 193

Query: 408 VNYLL-KHININHQDKDGWTPLTC-SIKG-QASLEVFHSIIEAGADIKAKLMDGTTALHL 464
           V   L   I    Q +   T L C          +V   ++  GA++  K  D  T LH+
Sbjct: 194 VKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHV 253

Query: 465 ACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSN 523
           A    +  ++  L KH   +N+ + LG+T ++ A    HL+   LLL  G+D ++     
Sbjct: 254 AAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQG 313

Query: 524 FTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCA 562
           FT   +       E V  +LS    +   D      L  A
Sbjct: 314 FTAAQMGN-----EAVQQILSESTPMRTSDVDY--RLLEA 346

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  238 bits (611), Expect = 6e-71
 Identities = 78/329 (23%), Positives = 130/329 (39%), Gaps = 33/329 (10%)

Query: 573 HLINSNADITMYKND--SPLHLACATGNMDMITYAMKYF-----DVNIENDIGETPLHVA 625
            L + +A   +        L  A  +GN + +   M        + +  +    TPLH+A
Sbjct: 9   DLADPSAKAVLTGEYKKDELLEAARSGNEEKL---MALLTPLNVNCHASDGRKSTPLHLA 65

Query: 626 VSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT- 684
             +  +  V+ LL     DV+ K K G   L  AC     ++ E+LL+  A VN  D   
Sbjct: 66  AGYNRVRIVQLLLQ-HGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQ 124

Query: 685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEEC 744
           +TPL+ A  K+  +++  +L+ +GAD  L N  C+  + +  A       +   +     
Sbjct: 125 FTPLHEAASKN-RVEVCSLLLSHGADPTLVN--CHGKSAVDMAPTPE-LRERLTYE---- 176

Query: 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLY--- 801
                   F   + L  AA   +L  +K  L              + L  +         
Sbjct: 177 --------FKGHSLLQ-AAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRK 227

Query: 802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
           ++ + LL   A+ N +  K   T LH AA     D++++L K+ A +NA D  G+ A H 
Sbjct: 228 QVAELLLRKGANVNEKN-KDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHR 286

Query: 862 ACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           A  A +      LL  GS+    +    T
Sbjct: 287 AALAGHLQTCRLLLSYGSDPSIISLQGFT 315

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  179 bits (456), Expect = 7e-50
 Identities = 53/262 (20%), Positives = 91/262 (34%), Gaps = 39/262 (14%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
            +  L  A  + + ++  LL+  G    LV+               + +  A      E 
Sbjct: 124 QFTPLHEAASKNRVEVCSLLLSHGADPTLVNC-----------HGKSAVDMAPTPELRER 172

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           +    +              + L  A   +   + K L           Q  +  T LH 
Sbjct: 173 LTYEFK------------GHSLLQAAREADLAKVKKTLALEII---NFKQPQSHETALHC 217

Query: 334 ACRR---KCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPE 390
           A      K  ++ ++LL KGA++N  N D  TPL  A  +   +V   L  HG  ++  +
Sbjct: 218 AVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALD 277

Query: 391 GE-RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
              +TALH A+  G+L+    LL +  + +     G+T        Q   E    I+   
Sbjct: 278 SLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAA------QMGNEAVQQILSES 331

Query: 449 ADIKAKLMDGTTALHLACYFGN 470
             ++    D    L  A   G+
Sbjct: 332 TPMRTS--DVDYRLLEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  156 bits (397), Expect = 6e-42
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 10/215 (4%)

Query: 700 IIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTAL 759
               L    A   LT E  Y    L  A+  G+   +   L    N +    +    T L
Sbjct: 6   SALDLADPSAKAVLTGE--YKKDELLEAARSGNEEKLMALLT-PLNVNCHASDGRKSTPL 62

Query: 760 NFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTI 819
           + AA  N + +++ LL+ GAD    D     PL ++C  G YE+ + LL++ A  N    
Sbjct: 63  HLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMD- 121

Query: 820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879
               T LH AA  N++++  LLL + AD    + +GK A   A   +  + +T+     S
Sbjct: 122 LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHS 181

Query: 880 NIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKN 914
            ++ A +          V+K +A     N    ++
Sbjct: 182 LLQAAREA-----DLAKVKKTLAL-EIINFKQPQS 210

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  127 bits (323), Expect = 3e-32
 Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 3/161 (1%)

Query: 731 GDCNDIARFLVEECNADITLRNFNNRTALNFAA-FGNNLDLLKFLLKAGADPDILDLKDT 789
           G+    A  L +  +A   L     +  L  AA  GN   L+  L     +    D + +
Sbjct: 1   GEFGKSALDLADP-SAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKS 59

Query: 790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
           +PL  +       IV  LL++ AD + +  K G   LH A  +   ++ +LLLK+ A +N
Sbjct: 60  TPLHLAAGYNRVRIVQLLLQHGADVHAKD-KGGLVPLHNACSYGHYEVTELLLKHGACVN 118

Query: 850 AEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           A D +     H A      ++ + LL  G++      +  +
Sbjct: 119 AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKS 159

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  265 bits (680), Expect = 2e-80
 Identities = 68/428 (15%), Positives = 119/428 (27%), Gaps = 100/428 (23%)

Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           ++ +L  A+    +   +    +             L P           +         
Sbjct: 37  SQHSLLEASYDGYIKRQRNELQHY-----------SLYPNPQGYGNGNDFLGDFNHTNLQ 85

Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYL 411
                  +    L    A     +   +     ++  P   RT LH  +   + E    L
Sbjct: 86  IPTEPEPESPIKLHTE-AAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDL 144

Query: 412 LKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNL 471
           + H                              I AGAD+ A   D  T L LA      
Sbjct: 145 IVH-------------------------EAKECIAAGADVNAMDCDENTPLMLAVLARRR 179

Query: 472 AMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLL---KLGADVAVKMKSNFTCL 527
            +V YL+K   D    N   ++ ++ A  N    +   +L   KL  D+           
Sbjct: 180 RLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI----------- 228

Query: 528 HVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGN---QLEVFNHLINSNADITMY 584
                                   D  G T L          Q+     L+   A +   
Sbjct: 229 ---------------------EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD 267

Query: 585 KNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNID 644
                                      + E   G T LH A     +  VK+L+  K  +
Sbjct: 268 GAA----------------------RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305

Query: 645 VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKM 703
            + + +DG T +  A  + R+++V  L++  A V   D T +T    A   +   +I+ +
Sbjct: 306 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANN-HHNIVDI 364

Query: 704 LVKYGADV 711
             +   + 
Sbjct: 365 FDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  229 bits (587), Expect = 2e-67
 Identities = 68/374 (18%), Positives = 130/374 (34%), Gaps = 47/374 (12%)

Query: 168 VSDKKETSKNPQSSDSNSDKALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKT 227
           + ++++  KN QS  S+   +L E   + + K    E   Y                   
Sbjct: 21  MENEEKNRKNHQSITSSQ-HSLLEASYDGYIKRQRNELQHY-----SLYPNPQGYGNGND 74

Query: 228 DIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAI 287
            +              +            E+   LH+    S   + + +  +  N   I
Sbjct: 75  FLGDFNHTNLQIPTEPEP-----------ESPIKLHTEAAGS-YAITEPITRESVNI--I 120

Query: 288 EKSRNRTALHVAAIVESVDIVKLLFDYGAEK------SVNVQNVAGLTPLHIACRRKCLE 341
           +   NRT LH  A   S +  + L  + A++       VN  +    TPL +A   +   
Sbjct: 121 DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRR 180

Query: 342 IVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH---GCDLSVP-EGERTALH 397
           +V  L+  GAD    N    + L  A A     +  Y++N      D+        TAL 
Sbjct: 181 LVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALM 240

Query: 398 MASQFGNLEMVN---YLLKH-ININH--------QDKDGWTPLTC-SIKGQASLEVFHS- 443
           + +     + V     L++    +++        +   G T L   +     ++ +    
Sbjct: 241 IVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS--NMPIVKYL 298

Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNH 502
           + E G++   +  DG T + LA   G + +V YL++    + + +    T    A  NNH
Sbjct: 299 VGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNH 358

Query: 503 LEIFNLLLKLGADV 516
             I ++  +   + 
Sbjct: 359 HNIVDIFDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  228 bits (583), Expect = 8e-67
 Identities = 70/446 (15%), Positives = 123/446 (27%), Gaps = 110/446 (24%)

Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFN 507
                  +     +L  A Y G +            N        P      N +  + +
Sbjct: 27  NRKNHQSITSSQHSLLEASYDGYIKRQ--------RNELQHYSLYPNPQGYGNGNDFLGD 78

Query: 508 LLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNL-QDNKGCTPLHCAIVGN 566
                          +   LH      S  +   +     VN+       T LH     +
Sbjct: 79  FNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRE-SVNIIDPRHNRTVLHWIASNS 136

Query: 567 QLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAV 626
             E    LI   A   +                          DVN  +    TPL +AV
Sbjct: 137 SAEKSEDLIVHEAKECIAAG----------------------ADVNAMDCDENTPLMLAV 174

Query: 627 SHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYT 686
                  V +L+     D     K   +AL  A  ++   ++  +L +            
Sbjct: 175 LARRRRLVAYLMK-AGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTK---------- 223

Query: 687 PLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRG--DCNDIARFLVE-- 742
                                  D+   +     MT L   ++    D    A+ LVE  
Sbjct: 224 --------------------LKGDIEELDR--NGMTALMIVAHNEGRDQVASAKLLVEKG 261

Query: 743 -----ECNADITLRNFNNRTALNFAAFGNNLDLLKFLL-KAGADPDILDLKDTSPLLSSC 796
                +  A      +  RTAL++AA  +N+ ++K+L+ + G++ D  D           
Sbjct: 262 AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQD----------- 310

Query: 797 RQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK 856
                                  + G T +  AA   +++++  L++  A + A D    
Sbjct: 311 -----------------------EDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDH 347

Query: 857 IAFHSACQAKNWDIVTFLLDAGSNIE 882
            A   A    + +IV          E
Sbjct: 348 TARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  209 bits (533), Expect = 5e-60
 Identities = 64/343 (18%), Positives = 117/343 (34%), Gaps = 35/343 (10%)

Query: 569 EVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSH 628
            + N   N     ++  +   L  A   G +            N        P      +
Sbjct: 20  PMENEEKNRKNHQSITSSQHSLLEASYDGYIKR--------QRNELQHYSLYPNPQGYGN 71

Query: 629 GCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPL 688
           G      F              +    L          + E +   + ++       T L
Sbjct: 72  GNDFLGDFNHT-NLQIPTEPEPESPIKLHTEAAG-SYAITEPITRESVNIIDPRHNRTVL 129

Query: 689 YTA-------LMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLV 741
           +           +D  +   K  +  GADVN  +      TPL  A        +  +L+
Sbjct: 130 HWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC--DENTPLMLAVLAR-RRRLVAYLM 186

Query: 742 EECNADITLRNFNNRTALNFAAFGNNLDLLKFLL---KAGADPDILDLKDTSPLLSSCRQ 798
           +   AD T+ N + R+AL+ AA   +  ++ ++L   K   D + LD    + L+     
Sbjct: 187 KA-GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHN 245

Query: 799 GLYEIVDT---LLEYNADTNLRTI-------KHGSTALHTAAFHNQLDIIKLLLKYN-AD 847
              + V +   L+E  A  +             G TALH AA  + + I+K L+    ++
Sbjct: 246 EGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305

Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
            + +D+ GK     A Q    ++V +L+  G+++E       T
Sbjct: 306 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHT 348

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  257 bits (659), Expect = 1e-78
 Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 20/279 (7%)

Query: 256 IETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYG 315
           +E +  L  A+ N D++LV+ LLE GAN    E+    T LH A  +   DIV+LL  +G
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62

Query: 316 AEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
           A+    ++   G TP  +A     ++++K+ L KGAD+N  +  G T    A     ++ 
Sbjct: 63  AD--PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120

Query: 376 FNYLVNHGCD-----------LSVPEGERTALHMASQFGNLEMVNYLLKH--ININHQDK 422
             +L   G +             + +G  TAL  A++ G++E++  LL     ++N  D 
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN 180

Query: 423 DGWTPLTCSIKG---QASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK 479
            G   L  ++          + H +++ GAD+  +   G T L LA    +L +V  L++
Sbjct: 181 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240

Query: 480 H--IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
              I+IN  +  GKT +  A++    +I  LL K GA  
Sbjct: 241 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  243 bits (622), Expect = 2e-73
 Identities = 79/374 (21%), Positives = 133/374 (35%), Gaps = 113/374 (30%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
               L  A + + +++V+ LL+ GA++N   ++G                          
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEG-------------------------- 38

Query: 387 SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSII 445
                  T LH A Q    ++V  LL+H  +   + K+G TP                  
Sbjct: 39  -----GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPF----------------- 76

Query: 446 EAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLE 504
                             LA   G++ ++   +    D+N  +  G T    A     ++
Sbjct: 77  -----------------LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVK 119

Query: 505 IFNLLLKLGADVAVKMKSN----------FTCLHVACEFASIEMVSFLLSHIG--VNLQD 552
               L K GA+V ++ K+            T L  A E   +E++  LL  +G  VN  D
Sbjct: 120 ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 179

Query: 553 NKGCTPLHCAI----VGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKY 608
           N G   L  A+      +   + + L++  AD+                           
Sbjct: 180 NMGRNALIHALLSSDDSDVEAITHLLLDHGADV--------------------------- 212

Query: 609 FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLV 668
              N+  + G+TPL +AV    L  V+ LL  ++I++N    DG TAL  A   K   + 
Sbjct: 213 ---NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA 269

Query: 669 EILLEANADVNLGD 682
           E+L +  A  + GD
Sbjct: 270 ELLCKRGASTDCGD 283

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  236 bits (606), Expect = 4e-71
 Identities = 76/333 (22%), Positives = 127/333 (38%), Gaps = 55/333 (16%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSE-NDLGKTPIYFAIKNNHLEIFNLLLKLGA 514
           +    L  A    ++ +V  L++   ++N +  + G TP++ A++ +  +I  LLL+ GA
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 515 DVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNH 573
           D  ++ K+  T   +A    S++++   LS    VN  D  G T    A V  +++    
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 574 LINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEA 633
           L    A++ + +                        D       G T L  A   G +E 
Sbjct: 124 LYKRGANVNLRRKTKE--------------------DQERLRKGGATALMDAAEKGHVEV 163

Query: 634 VKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALM 693
           +K LL+    DVN     G  AL  A        VE                        
Sbjct: 164 LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE------------------------ 199

Query: 694 KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNF 753
                 I  +L+ +GADVN+  E     TPL  A  +     + + L+E+ + +I   + 
Sbjct: 200 -----AITHLLLDHGADVNVRGE--RGKTPLILAVEKK-HLGLVQRLLEQEHIEINDTDS 251

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           + +TAL  A       + + L K GA  D  DL
Sbjct: 252 DGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  214 bits (547), Expect = 5e-63
 Identities = 74/339 (21%), Positives = 124/339 (36%), Gaps = 65/339 (19%)

Query: 521 KSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNK-GCTPLHCAIVGNQLEVFNHLINSN 578
             +   L  A +   +++V  LL     VN Q+ + G TPLH A+  ++ ++   L+   
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62

Query: 579 ADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLL 638
           AD                                +    G TP  +A   G ++ +K  L
Sbjct: 63  ADP------------------------------VLRKKNGATPFLLAAIAGSVKLLKLFL 92

Query: 639 NTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSL 698
           + K  DVN     G TA   A    ++  ++ L +  A+VNL                  
Sbjct: 93  S-KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRR---------------- 135

Query: 699 DIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTA 758
                  K   D     +     T L  A+ +G   ++ + L++E  AD+   +   R A
Sbjct: 136 -------KTKEDQERLRK--GGATALMDAAEKG-HVEVLKILLDEMGADVNACDNMGRNA 185

Query: 759 LNFAAFGNNLDLL----KFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLE-YNAD 813
           L  A   ++   +      LL  GAD ++   +  +PL+ +  +    +V  LLE  + +
Sbjct: 186 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED 852
            N      G TAL  A       I +LL K  A  +  D
Sbjct: 246 INDTD-SDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  189 bits (484), Expect = 2e-54
 Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 24/260 (9%)

Query: 649 TKDGSTALFFACYDKRLDLVEILLEANADVNL--GDGTYTPLYTALMKDPSLDIIKMLVK 706
             + +  L  A  ++ +DLV+ LLE  A+VN    +G +TPL+ A+      DI+++L++
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS-REDIVELLLR 60

Query: 707 YGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGN 766
           +GAD  L  +     TP   A+  G    + +  + +  AD+   +F   TA   AA   
Sbjct: 61  HGADPVLRKK--NGATPFLLAAIAG-SVKLLKLFLSK-GADVNECDFYGFTAFMEAAVYG 116

Query: 767 NLDLLKFLLKAGADPDILDLKDTS----------PLLSSCRQGLYEIVDTLL-EYNADTN 815
            +  LKFL K GA+ ++                  L+ +  +G  E++  LL E  AD N
Sbjct: 117 KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 176

Query: 816 LRTIKHGSTALHTAAFHNQ----LDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV 871
                 G  AL  A   +       I  LLL + AD+N   + GK     A + K+  +V
Sbjct: 177 ACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLV 235

Query: 872 TFLLD-AGSNIEKATKYRMT 890
             LL+     I        T
Sbjct: 236 QRLLEQEHIEINDTDSDGKT 255

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  118 bits (298), Expect = 1e-29
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 2/143 (1%)

Query: 752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKD-TSPLLSSCRQGLYEIVDTLLEY 810
              +   L  A    ++DL++ LL+ GA+ +  + +   +PL ++ +    +IV+ LL +
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 811 NADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDI 870
            AD  LR  K+G+T    AA    + ++KL L   AD+N  D YG  AF  A        
Sbjct: 62  GADPVLRK-KNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120

Query: 871 VTFLLDAGSNIEKATKYRMTFES 893
           + FL   G+N+    K +   E 
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQER 143

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  102 bits (257), Expect = 4e-24
 Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 20/151 (13%)

Query: 213 QGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI 271
            G  AL  A ++   ++ K+L+D+ G  +N  D                 L  A+L+SD 
Sbjct: 147 GGATALMDAAEKGHVEVLKILLDEMGADVNACDN-----------MGRNALIHALLSSDD 195

Query: 272 ----ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFD-YGAEKSVNVQNVA 326
                +  LLL+ GA+     +   +T L +A   + + +V+ L +    E  +N  +  
Sbjct: 196 SDVEAITHLLLDHGADVNVRGER-GKTPLILAVEKKHLGLVQRLLEQEHIE--INDTDSD 252

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGN 357
           G T L +A   K  +I ++L  +GA  + G+
Sbjct: 253 GKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  246 bits (631), Expect = 1e-74
 Identities = 68/299 (22%), Positives = 109/299 (36%), Gaps = 23/299 (7%)

Query: 221 ALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEK 280
                    +  LV +G  +  +D                P               LL  
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGS------KPAGPRDFPG-----IRLLSN 50

Query: 281 GANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCL 340
                  +   + + +H AAI      ++ L   G    VN+     ++PLH AC    L
Sbjct: 51  PLM---GDAVSDWSPMHEAAIHGHQLSLRNLISQGWA--VNIITADHVSPLHEACLGGHL 105

Query: 341 EIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMAS 400
             VKILL  GA +N    D  TPLF A      +  N L+ HG  +       + +H A+
Sbjct: 106 SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAA 165

Query: 401 QFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDG 458
           + G++E VN L+ +  NI+H+     TPL                ++E+GAD+       
Sbjct: 166 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ--QRACVKKLLESGADVNQG-KGQ 222

Query: 459 TTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
            + LH      +  +   L+    D  ++N  GK P+      + L     L + GA +
Sbjct: 223 DSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQL-FLEREGASL 280

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  235 bits (602), Expect = 1e-70
 Identities = 65/327 (19%), Positives = 116/327 (35%), Gaps = 52/327 (15%)

Query: 333 IACRRKCLEIVKILLDKGADINSGND-----DGCTPLFCAIAQNCLEVFNYLVNHGCDLS 387
           +            L+ +G+ + S +      DG  P           + N L+       
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVS-- 58

Query: 388 VPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSII 445
               + + +H A+  G+   +  L+     +N    D  +PL    + G   L     ++
Sbjct: 59  ----DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGG--HLSCVKILL 112

Query: 446 EAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLE 504
           + GA +     D  T L  AC  G+   VN L++H   +  E+D   +PI+ A +  H+E
Sbjct: 113 KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVE 171

Query: 505 IFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNL-QDNKGCTPLHCAI 563
             N L+  G ++  K+    T L++ACE      V  LL   G ++ Q     +PLH  +
Sbjct: 172 CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES-GADVNQGKGQDSPLHAVV 230

Query: 564 VGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLH 623
                E+   L++  AD                                 +N  G+ P+ 
Sbjct: 231 RTASEELACLLMDFGADT------------------------------QAKNAEGKRPVE 260

Query: 624 VAVSHGCLEAVKFLLNTKNIDVNHKTK 650
           +      L  +   L  +   +  K K
Sbjct: 261 LVPPESPLAQL--FLEREGASLP-KPK 284

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  223 bits (572), Expect = 2e-66
 Identities = 60/292 (20%), Positives = 105/292 (35%), Gaps = 20/292 (6%)

Query: 298 VAAIVESVDIVKLLFDYGA---EKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADIN 354
           + +          L   G+           + G  P               LL      +
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIR-----LLSNPLMGD 55

Query: 355 SGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL-SVPEGERTALHMASQFGNLEMVNYLLK 413
                  +P+  A           L++ G  +  +     + LH A   G+L  V  LLK
Sbjct: 56  --AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLK 113

Query: 414 H-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNL 471
           H   +N    D  TPL    + G  S +  + +++ GA ++ +  D  + +H A   G++
Sbjct: 114 HGAQVNGVTADWHTPLFNACVSG--SWDCVNLLLQHGASVQPES-DLASPIHEAARRGHV 170

Query: 472 AMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVA 530
             VN L+ +  +I+ +     TP+Y A +N        LL+ GADV  + K   + LH  
Sbjct: 171 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAV 229

Query: 531 CEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
              AS E+   L+        ++ +G  P+      + L     L    A +
Sbjct: 230 VRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQL-FLEREGASL 280

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  222 bits (568), Expect = 7e-66
 Identities = 71/354 (20%), Positives = 120/354 (33%), Gaps = 77/354 (21%)

Query: 398 MASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLM 456
           M S   +    + L+    ++   D                                  M
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGG-----------------------------M 31

Query: 457 DGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
           DG+       + G   + N       +  +     +P++ A  + H      L+  G  V
Sbjct: 32  DGSKPAGPRDFPGIRLLSN------PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV 85

Query: 517 AVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEVFNHL 574
            +    + + LH AC    +  V  LL H G  VN       TPL  A V    +  N L
Sbjct: 86  NIITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLL 144

Query: 575 INSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAV 634
           +   A +                                E+D   +P+H A   G +E V
Sbjct: 145 LQHGASV------------------------------QPESD-LASPIHEAARRGHVECV 173

Query: 635 KFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMK 694
             L+     +++HK     T L+ AC +++   V+ LLE+ ADVN G G  +PL+  +  
Sbjct: 174 NSLIA-YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRT 232

Query: 695 DPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADI 748
             S ++  +L+ +GAD    N       P+           +A+  +E   A +
Sbjct: 233 A-SEELACLLMDFGADTQAKNA--EGKRPVELVPPES---PLAQLFLEREGASL 280

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  221 bits (566), Expect = 1e-65
 Identities = 70/364 (19%), Positives = 121/364 (33%), Gaps = 87/364 (23%)

Query: 529 VACEFASIEMVSFLLSH-IGVNLQDNK-----GCTPLHCAIVGNQLEVFNHLINSNADIT 582
           +          S L+     +   D K     G  P          +     + SN    
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPR------DFPGIRLLSNP--- 51

Query: 583 MYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKN 642
                                       +  +     +P+H A  HG   +++ L++ + 
Sbjct: 52  ----------------------------LMGDAVSDWSPMHEAAIHGHQLSLRNLIS-QG 82

Query: 643 IDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDII 701
             VN  T D  + L  AC    L  V+ILL+  A VN      +TPL+ A +   S D +
Sbjct: 83  WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG-SWDCV 141

Query: 702 KMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNF 761
            +L+++GA V   ++     +P+H A+ RG   +    L+     +I  +  +  T L  
Sbjct: 142 NLLLQHGASVQPESD---LASPIHEAARRG-HVECVNSLIAY-GGNIDHKISHLGTPLYL 196

Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
           A        +K LL++GAD                              N        K 
Sbjct: 197 ACENQQRACVKKLLESGADV-----------------------------NQG------KG 221

Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
             + LH        ++  LL+ + AD  A++  GK         ++     FL   G+++
Sbjct: 222 QDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP-ESPLAQLFLEREGASL 280

Query: 882 EKAT 885
            K  
Sbjct: 281 PKPK 284

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  197 bits (504), Expect = 5e-57
 Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 18/271 (6%)

Query: 624 VAVSHGCLEAVKFLL----NTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN 679
           +  SH        L+    +  ++D      DGS       +        I L +N  + 
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDF------PGIRLLSNPLMG 54

Query: 680 LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARF 739
                ++P++ A +       ++ L+  G  VN+      +++PLH A   G      + 
Sbjct: 55  DAVSDWSPMHEAAIHG-HQLSLRNLISQGWAVNIITA--DHVSPLHEACLGG-HLSCVKI 110

Query: 740 LVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG 799
           L++   A +     +  T L  A    + D +  LL+ GA         + P+  + R+G
Sbjct: 111 LLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLAS-PIHEAARRG 168

Query: 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAF 859
             E V++L+ Y  + + +   H  T L+ A  + Q   +K LL+  AD+N   K      
Sbjct: 169 HVECVNSLIAYGGNIDHKI-SHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPL 226

Query: 860 HSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           H+  +  + ++   L+D G++ +        
Sbjct: 227 HAVVRTASEELACLLMDFGADTQAKNAEGKR 257

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  197 bits (503), Expect = 6e-57
 Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 19/243 (7%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
            +  +  A         + L+ +G  +N++             +  +PLH A L   +  
Sbjct: 59  DWSPMHEAAIHGHQLSLRNLISQGWAVNIITA-----------DHVSPLHEACLGGHLSC 107

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           VK+LL+ GA    +      T L  A +  S D V LL  +GA  SV  ++    +P+H 
Sbjct: 108 VKILLKHGAQVNGVTA-DWHTPLFNACVSGSWDCVNLLLQHGA--SVQPES-DLASPIHE 163

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGER 393
           A RR  +E V  L+  G +I+       TPL+ A           L+  G D++  +G+ 
Sbjct: 164 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQD 223

Query: 394 TALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI- 451
           + LH   +  + E+   L+    +   ++ +G  P+          ++F  +   GA + 
Sbjct: 224 SPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQLF--LEREGASLP 281

Query: 452 KAK 454
           K K
Sbjct: 282 KPK 284

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  108 bits (272), Expect = 4e-26
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)

Query: 211 HSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSD 270
            S     +  A +    +    L+  G  ++                  TPL+ A  N  
Sbjct: 154 ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKIS-----------HLGTPLYLACENQQ 202

Query: 271 IELVKLLLEKGANPLAIEKSRN-RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLT 329
              VK LLE GA+   + + +   + LH      S ++  LL D+GA+     +N  G  
Sbjct: 203 RACVKKLLESGAD---VNQGKGQDSPLHAVVRTASEELACLLMDFGAD--TQAKNAEGKR 257

Query: 330 PLHIACRRKCLEIVKILLDKGADIN 354
           P+ +      L  +  L  +GA + 
Sbjct: 258 PVELVPPESPLAQL-FLEREGASLP 281

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  102 bits (258), Expect = 3e-24
 Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 8/158 (5%)

Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
            +  ++      L+  G+    +D      +  S   G  +     L  N    +     
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMD-GKQGGMDGSKPAGPRDFPGIRLLSNP--LMGDAVS 58

Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
             + +H AA H     ++ L+     +N          H AC   +   V  LL  G+ +
Sbjct: 59  DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 118

Query: 882 EKATKYRMT--FESSKVVEKHVAKL---RAANIYVDKN 914
              T    T  F +          L     A++  + +
Sbjct: 119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD 156

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  242 bits (619), Expect = 7e-73
 Identities = 62/300 (20%), Positives = 117/300 (39%), Gaps = 17/300 (5%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
                         ++  + K        K  +      A      + V  L + GA+  
Sbjct: 10  RNEQLKRWIGSETDLEPPVVKRKKTKV--KFDDGAVFLAACSSGDTEEVLRLLERGAD-- 65

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           +N  NV GLT LH AC    +++VK L++ GA+IN  +++G  PL  A +   L++  YL
Sbjct: 66  INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYL 125

Query: 380 VNHGCDL-SVPEGERTALHMASQFGNLEMVNYLL--KHININHQDKDGWTPLTCSIKGQA 436
           ++ G  + +V     T L +A +    E++   +  + ++I    K+    +        
Sbjct: 126 ISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIM-------- 177

Query: 437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIY 495
             +    +     +       G TALH+A   G   ++  L++   D+N ++  G TP++
Sbjct: 178 LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLH 237

Query: 496 FAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNK 554
            A      E   +L++   D+    K   T   VA E     +        +  + +  K
Sbjct: 238 AAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  241 bits (617), Expect = 2e-72
 Identities = 60/300 (20%), Positives = 110/300 (36%), Gaps = 16/300 (5%)

Query: 287 IEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKIL 346
           +  ++ +    +   + S   ++       +    V+   G      AC     E V  L
Sbjct: 3   MADAKQKRNEQLKRWIGSETDLEPPVVKRKK--TKVKFDDG-AVFLAACSSGDTEEVLRL 59

Query: 347 LDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNL 405
           L++GADIN  N DG T L  A   + +++  +LV +G +++ P+ E    LH A+  G L
Sbjct: 60  LERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119

Query: 406 EMVNYLLKH-ININHQDKDGWTPL-TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALH 463
           ++  YL+    ++   + +G TPL     +     E+  + +           D   A  
Sbjct: 120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEA--MEELLQNEVNRQGV------DIEAARK 171

Query: 464 LACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKS 522
                       +L    I+       G T ++ A    + E+  LL++   DV +K   
Sbjct: 172 EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD 231

Query: 523 NFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
            +T LH A  +   E    L+ +   +   +  G T    A       +       N   
Sbjct: 232 GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLH 291

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  232 bits (595), Expect = 2e-69
 Identities = 68/338 (20%), Positives = 117/338 (34%), Gaps = 43/338 (12%)

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           + + +        +         ++  + K        DDG   L  A +    E    L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFL-AACSSGDTEEVLRL 59

Query: 380 VNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQA 436
           +  G D++       TALH A    N++MV +L+++  NIN  D +GW PL   +  G  
Sbjct: 60  LERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG-- 117

Query: 437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYF 496
            L++   +I  GA + A   +G T L +A       ++   V    ++      +     
Sbjct: 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVD-----IEAARKE 172

Query: 497 AIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKG 555
             +    +    L     +     KS  T LHVA      E++  L+     VN++D  G
Sbjct: 173 EERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG 232

Query: 556 CTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIEN 615
            TPLH A    + E    L+ +  D+                                 N
Sbjct: 233 WTPLHAAAHWGKEEACRILVENLCDM------------------------------EAVN 262

Query: 616 DIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGS 653
            +G+T   VA         +     +N+  + K +  S
Sbjct: 263 KVGQTAFDVADEDILGYLEELQKK-QNLLHSEKREKKS 299

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  228 bits (583), Expect = 1e-67
 Identities = 70/335 (20%), Positives = 108/335 (32%), Gaps = 45/335 (13%)

Query: 353 INSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLL 412
           +   +                      V       V   +      A   G+ E V  LL
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLL 60

Query: 413 KH-ININHQDKDGWTPL-TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGN 470
           +   +IN+ + DG T L    I    ++++   ++E GA+I     +G   LH A   G 
Sbjct: 61  ERGADINYANVDGLTALHQACIDD--NVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118

Query: 471 LAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLL-KLGADVAVKMKSNFTCLH 528
           L +  YL+     + + N  G TP+  A +    E+    + + G D+            
Sbjct: 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI-------EAARK 171

Query: 529 VACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND 587
                   +   +L S  I        G T LH A      EV   LI +  D+      
Sbjct: 172 EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV------ 225

Query: 588 SPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNH 647
                                   NI++  G TPLH A   G  EA + L+     D+  
Sbjct: 226 ------------------------NIKDYDGWTPLHAAAHWGKEEACRILVE-NLCDMEA 260

Query: 648 KTKDGSTALFFACYDKRLDLVEILLEANADVNLGD 682
             K G TA   A  D    L E+  + N   +   
Sbjct: 261 VNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKR 295

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  220 bits (564), Expect = 3e-65
 Identities = 72/333 (21%), Positives = 123/333 (36%), Gaps = 46/333 (13%)

Query: 451 IKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLL 509
           +K           L  + G+   +   V        + D G   +  A  +   E    L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLA-ACSSGDTEEVLRL 59

Query: 510 LKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQL 568
           L+ GAD+        T LH AC   +++MV FL+ +   +N  DN+G  PLH A     L
Sbjct: 60  LERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119

Query: 569 EVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSH 628
           ++  +LI+  A +                                 N  G+TPL +A   
Sbjct: 120 DIAEYLISQGAHV------------------------------GAVNSEGDTPLDIAEEE 149

Query: 629 GCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTP 687
              E ++  +N + +D+    K+    +         D  + L   + +      +  T 
Sbjct: 150 AMEELLQNEVNRQGVDIEAARKEEERIM-------LRDARQWLNSGHINDVRHAKSGGTA 202

Query: 688 LYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNAD 747
           L+ A  K    +++K+L++   DVN+ +      TPLH A++ G   +  R LVE    D
Sbjct: 203 LHVAAAKG-YTEVLKLLIQARYDVNIKDY--DGWTPLHAAAHWG-KEEACRILVEN-LCD 257

Query: 748 ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
           +   N   +TA + A       L +   K    
Sbjct: 258 MEAVNKVGQTAFDVADEDILGYLEELQKKQNLL 290

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  220 bits (562), Expect = 8e-65
 Identities = 69/342 (20%), Positives = 116/342 (33%), Gaps = 45/342 (13%)

Query: 548 VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMK 607
           + + D K                    +                                
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKT-------------------------- 34

Query: 608 YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDL 667
                ++ D G      A S G  E V  LL  +  D+N+   DG TAL  AC D  +D+
Sbjct: 35  ----KVKFDDG-AVFLAACSSGDTEEVLRLLE-RGADINYANVDGLTALHQACIDDNVDM 88

Query: 668 VEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHY 726
           V+ L+E  A++N  D   + PL+ A      LDI + L+  GA V   N      TPL  
Sbjct: 89  VKFLVENGANINQPDNEGWIPLHAAASCG-YLDIAEYLISQGAHVGAVNS--EGDTPLDI 145

Query: 727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           A       ++ +  V     DI         A          D  ++L     +      
Sbjct: 146 AEEEA-MEELLQNEVNRQGVDI-------EAARKEEERIMLRDARQWLNSGHINDVRHAK 197

Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
              + L  +  +G  E++  L++   D N++    G T LH AA   + +  ++L++   
Sbjct: 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNIKD-YDGWTPLHAAAHWGKEEACRILVENLC 256

Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYR 888
           D+ A +K G+ AF  A +     +            +  + +
Sbjct: 257 DMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKREKK 298

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  200 bits (511), Expect = 7e-58
 Identities = 71/310 (22%), Positives = 117/310 (37%), Gaps = 59/310 (19%)

Query: 216 KALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVK 275
                A     T+    L+++G  +N  +            +  T LH A ++ ++++VK
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANV-----------DGLTALHQACIDDNVDMVK 90

Query: 276 LLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIAC 335
            L+E GAN                                    +N  +  G  PLH A 
Sbjct: 91  FLVENGAN------------------------------------INQPDNEGWIPLHAAA 114

Query: 336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN-HGCDLSVPEGERT 394
               L+I + L+ +GA + + N +G TPL  A  +   E+    VN  G D+        
Sbjct: 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI------EA 168

Query: 395 ALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIK 452
           A     +    +   +L    IN     K G T L   + KG    EV   +I+A  D+ 
Sbjct: 169 ARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKG--YTEVLKLLIQARYDVN 226

Query: 453 AKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
            K  DG T LH A ++G       LV++  D+ + N +G+T    A ++    +  L  K
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKK 286

Query: 512 LGADVAVKMK 521
                + K +
Sbjct: 287 QNLLHSEKRE 296

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  169 bits (432), Expect = 3e-47
 Identities = 51/247 (20%), Positives = 88/247 (35%), Gaps = 31/247 (12%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G  AL  A  +   D+ K LV+ G  +N  D            E   PLH+A     +++
Sbjct: 73  GLTALHQACIDDNVDMVKFLVENGANINQPDN-----------EGWIPLHAAASCGYLDI 121

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            + L+ +GA+  A+      T L +A      ++++          VN Q V        
Sbjct: 122 AEYLISQGAHVGAVNSE-GDTPLDIAEEEAMEELLQNE--------VNRQGVDIEAARKE 172

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGE 392
             R    +  + L     +       G T L  A A+   EV   L+    D+++     
Sbjct: 173 EERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG 232

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIE----A 447
            T LH A+ +G  E    L+++  ++   +K G T         A  ++   + E     
Sbjct: 233 WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV-----ADEDILGYLEELQKKQ 287

Query: 448 GADIKAK 454
                 K
Sbjct: 288 NLLHSEK 294

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  146 bits (370), Expect = 6e-39
 Identities = 45/212 (21%), Positives = 78/212 (36%), Gaps = 22/212 (10%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G+  L  A      DIA+ L+ +G  +  V+            E DTPL  A   +  EL
Sbjct: 106 GWIPLHAAASCGYLDIAEYLISQGAHVGAVNS-----------EGDTPLDIAEEEAMEEL 154

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           ++  + +              A      +   D  + L              +G T LH+
Sbjct: 155 LQNEVNRQGV-------DIEAARKEEERIMLRDARQWLNSGHIN--DVRHAKSGGTALHV 205

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGE 392
           A  +   E++K+L+    D+N  + DG TPL  A      E    LV + CD+    +  
Sbjct: 206 AAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVG 265

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKD 423
           +TA  +A +     +     K  +  + + + 
Sbjct: 266 QTAFDVADEDILGYLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  115 bits (291), Expect = 2e-28
 Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 2/143 (1%)

Query: 748 ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTL 807
           + + +   +       +  +   L+  +       +    D +  L++C  G  E V  L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKF-DDGAVFLAACSSGDTEEVLRL 59

Query: 808 LEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN 867
           LE  AD N      G TALH A   + +D++K L++  A+IN  D  G I  H+A     
Sbjct: 60  LERGADINYAN-VDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118

Query: 868 WDIVTFLLDAGSNIEKATKYRMT 890
            DI  +L+  G+++        T
Sbjct: 119 LDIAEYLISQGAHVGAVNSEGDT 141

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  232 bits (594), Expect = 2e-69
 Identities = 55/333 (16%), Positives = 105/333 (31%), Gaps = 56/333 (16%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRN-RTALHVAAIVESVDIVKLLFDYGAEK 318
                       + +K  L    +    +   +  +A + A    +V +V  L + GA  
Sbjct: 3   DLSRIN--TWKSKQLKSFL-SSKDT--FKADVHGHSASYYAIADNNVRLVCTLLNAGAL- 56

Query: 319 SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNY 378
             N+       PLH A   +  +IVKILL  G D +  +D G T L+ A+    ++    
Sbjct: 57  -KNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKL 113

Query: 379 LVNHGCDLSVP--EGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQA 436
            V     L      G +T+ + A    ++ +V+Y L  I          +          
Sbjct: 114 FVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSC--------- 164

Query: 437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTP-I 494
                                    +H+    G++ M+  L+ +    N+ N L   P I
Sbjct: 165 -------------------------IHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDI 199

Query: 495 YFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDN 553
             AI N  +E+   L K   ++        +           E+   ++   +       
Sbjct: 200 KLAIDNKDIEMLQALFKYDINI------Y-SANLENVLLDDAEIAKMIIEKHVEYKSDSY 252

Query: 554 KGCTPLHCAIVGNQLEVFNHLINSNADITMYKN 586
                +      +++   N  +       + KN
Sbjct: 253 TKDLDIVKNNKLDEIISKNKELRLMYVNCVKKN 285

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  217 bits (555), Expect = 4e-64
 Identities = 52/296 (17%), Positives = 113/296 (38%), Gaps = 18/296 (6%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
           G+    I   +   + +K  L    D    +  G +  + AIA N + +   L+N G   
Sbjct: 1   GMDLSRINTWK--SKQLKSFL-SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

Query: 387 SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSI 444
           ++ E     LH A+   + ++V  LL   ++ +  D  G T L      G  +++     
Sbjct: 58  NLLEN-EFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSG--NMQTVKLF 114

Query: 445 IEAGADIKAKLMDG-TTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHL 503
           ++    +      G  T+ + A    ++++V+Y +  I    +  +  + I+  IKN H+
Sbjct: 115 VKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHV 174

Query: 504 EIFNLLLKLGADVAVKMKSNFT-CLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCA 562
           ++  LLL             F   + +A +   IEM+  L  +  +N+      +     
Sbjct: 175 DMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY-DINIY-----SANLEN 228

Query: 563 IVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITY--AMKYFDVNIEND 616
           ++ +  E+   +I  + +         L +       ++I+    ++   VN    
Sbjct: 229 VLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMYVNCVKK 284

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  198 bits (507), Expect = 2e-57
 Identities = 46/342 (13%), Positives = 99/342 (28%), Gaps = 85/342 (24%)

Query: 524 FTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITM 583
                +       + +   LS       D  G +  + AI  N + +   L+N+ A    
Sbjct: 2   MDLSRINTW--KSKQLKSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK-- 57

Query: 584 YKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNI 643
                                       N+     E PLH A +    + VK LL    +
Sbjct: 58  ----------------------------NLLE--NEFPLHQAATLEDTKIVKILLF-SGL 86

Query: 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGD--GTYTPLYTALMKDPSLDII 701
           D +     G+TAL++A     +  V++ ++ N  +      G  T  Y A+M +  + I+
Sbjct: 87  DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN-DVSIV 145

Query: 702 KMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRT-ALN 760
              +               ++ +H     G   D+   L++         N       + 
Sbjct: 146 SYFLSEIPSTFDLA---ILLSCIHITIKNG-HVDMMILLLDY-MTSTNTNNSLLFIPDIK 200

Query: 761 FAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIK 820
            A    ++++L+ L K   +                                        
Sbjct: 201 LAIDNKDIEMLQALFKYDINIY-------------------------------------- 222

Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
              +A       +  +I K++++ + +  ++     +     
Sbjct: 223 ---SANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKN 261

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  192 bits (490), Expect = 4e-55
 Identities = 52/303 (17%), Positives = 115/303 (37%), Gaps = 24/303 (7%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
           G     +       + +K  L+  + D       G +A ++A  D  + LV  LL A A 
Sbjct: 1   GMDLSRIN--TWKSKQLKSFLS--SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL 56

Query: 678 VNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIA 737
            NL +    PL+ A   +    I+K+L+  G D +  ++     T L+YA   G      
Sbjct: 57  KNLLEN-EFPLHQAATLE-DTKIVKILLFSGLDDSQFDD--KGNTALYYAVDSG-NMQTV 111

Query: 738 RFLVEECNADITLRNFNN-RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSC 796
           +  V++ N  +        +T+   A   N++ ++ + L        L +  +  +  + 
Sbjct: 112 KLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLS-CIHITI 169

Query: 797 RQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK 856
           + G  +++  LL+Y   TN          +  A  +  +++++ L KY+ +I + +    
Sbjct: 170 KNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN---- 225

Query: 857 IAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT-----FESSKVVEKHVAKLRAANIYV 911
                     + +I   +++     +  +  +        +  +++ K+          V
Sbjct: 226 ---LENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMYVNCV 282

Query: 912 DKN 914
            KN
Sbjct: 283 KKN 285

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  230 bits (589), Expect = 8e-69
 Identities = 59/283 (20%), Positives = 97/283 (34%), Gaps = 24/283 (8%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGA-EKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
            TALH+A I +    +  L  + A  + +++QN  G T LH+A        V+ L   GA
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69

Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYL 411
            +      G T L  A           L+                         +  +  
Sbjct: 70  GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH-----------------PRDASDTY 112

Query: 412 LKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNL 471
           L   + +        P     +     E      +    ++A+  DG T LH+A    + 
Sbjct: 113 LTQ-SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDA 171

Query: 472 AMVNYLVKH-IDINS-ENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHV 529
            MV  L     D+N  E   G+TP++ A++     +  LLLK GAD   +M    T L  
Sbjct: 172 EMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGS 231

Query: 530 ACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEV 570
           A    +  +   L +H G           +P   +   +  + 
Sbjct: 232 ALLRPNPILARLLRAH-GAPEPEDGGDKLSPCSSSGSDSDSDN 273

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  205 bits (524), Expect = 7e-60
 Identities = 56/325 (17%), Positives = 100/325 (30%), Gaps = 53/325 (16%)

Query: 548 VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMK 607
                  G T LH A++       + L+  +A                            
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE------------------------- 36

Query: 608 YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDL 667
              ++++ND+G+T LH+A   G    V+ L       V    + G TAL  AC  +    
Sbjct: 37  --YLDLQNDLGQTALHLAAILGEASTVEKLYA-AGAGVLVAERGGHTALHLACRVRAHTC 93

Query: 668 VEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYA 727
             +LL+                         D     +    D            P    
Sbjct: 94  ACVLLQPRPSHPR------------------DASDTYLTQSQDCTPDTS----HAPAAVD 131

Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
           S     N+      +     +   N++  T L+ A    + ++++ L  AGAD +  +  
Sbjct: 132 SQPNPENEEEPRDEDW-RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPT 190

Query: 788 D-TSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
              +PL  +       +++ LL+  AD   R    G T L +A       + +LL  + A
Sbjct: 191 CGRTPLHLAVEAQAASVLELLLKAGADPTARM-YGGRTPLGSALLRPNPILARLLRAHGA 249

Query: 847 DINAEDKYGKIAFHSACQAKNWDIV 871
               +         S+    + D  
Sbjct: 250 PEPEDGGDKLSPCSSSGSDSDSDNR 274

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  204 bits (522), Expect = 1e-59
 Identities = 58/314 (18%), Positives = 95/314 (30%), Gaps = 59/314 (18%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G  AL  A+  +       L+        +D     N   +     T LH A +  +   
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ---NDLGQ-----TALHLAAILGEAST 60

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNV-------- 325
           V+ L   GA  L  E+    TALH+A  V +     +L         +  +         
Sbjct: 61  VEKLYAAGAGVLVAERG-GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDC 119

Query: 326 ---AGLTPLHIACRRK-CLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN 381
                  P  +  +     E      D    + + N DG TPL  A+     E+   L +
Sbjct: 120 TPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD 179

Query: 382 HGCDLSVPEGE--RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASL 438
            G DL+ PE    RT LH+A +     ++  LLK   +   +   G TP           
Sbjct: 180 AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTP----------- 228

Query: 439 EVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFA 497
                                  L  A    N  +   L  H      +     +P   +
Sbjct: 229 -----------------------LGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSS 265

Query: 498 IKNNHLEIFNLLLK 511
             ++  +  +   +
Sbjct: 266 GSDSDSDNRDEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  202 bits (517), Expect = 6e-59
 Identities = 51/329 (15%), Positives = 82/329 (24%), Gaps = 59/329 (17%)

Query: 353 INSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP----EGERTALHMASQFGNLEMV 408
                +DG T L  A+        ++L+             +  +TALH+A+  G    V
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 409 NYLLKH-ININHQDKDGWTPL-TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLAC 466
             L      +   ++ G T L         +      +++          D         
Sbjct: 62  EKLYAAGAGVLVAERGGHTALHLACRVR--AHTCACVLLQPRPSHPRDASDTYLTQSQ-- 117

Query: 467 YFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTC 526
                          D   +       +  +  N   E           +  +     T 
Sbjct: 118 ---------------DCTPDTSHAPAAVD-SQPNPENEEEPRDEDWRLQLEAENYDGHTP 161

Query: 527 LHVACEFASIEMVSFLLSH-IGVNLQDNK-GCTPLHCAIVGNQLEVFNHLINSNADITMY 584
           LHVA      EMV  L      +N  +   G TPLH A+      V   L+ + AD    
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP--- 218

Query: 585 KNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNID 644
                                            G TPL  A+        + L       
Sbjct: 219 ---------------------------TARMYGGRTPLGSALLRPNPILARLLRA-HGAP 250

Query: 645 VNHKTKDGSTALFFACYDKRLDLVEILLE 673
                 D  +    +  D   D  +   E
Sbjct: 251 EPEDGGDKLSPCSSSGSDSDSDNRDEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  200 bits (510), Expect = 6e-58
 Identities = 58/300 (19%), Positives = 102/300 (34%), Gaps = 28/300 (9%)

Query: 483 INSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD---VAVKMKSNFTCLHVACEFASIEMV 539
                + G T ++ A+ + H    + LL   A    + ++     T LH+A        V
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 540 SFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGN 598
             L +   GV + +  G T LH A           L+          +D+ L  +     
Sbjct: 62  EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS----- 116

Query: 599 MDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFF 658
                        +   D    P  V          +       + +  +  DG T L  
Sbjct: 117 ------------QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHV 164

Query: 659 ACYDKRLDLVEILLEANADVNLGDGTY--TPLYTALMKDPSLDIIKMLVKYGADVNLTNE 716
           A   K  ++V +L +A AD+N  + T   TPL+ A+    +  ++++L+K GAD      
Sbjct: 165 AVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ-AASVLELLLKAGADPTARMY 223

Query: 717 ACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK 776
                TPL  A  R     +AR L     A       +  +  + +   ++ D      +
Sbjct: 224 --GGRTPLGSALLRP-NPILARLLRAH-GAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  145 bits (369), Expect = 5e-39
 Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 13/186 (6%)

Query: 198 KKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIE 257
               L +  +    +    A   +    + +      D  + L   +            +
Sbjct: 109 SDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY-----------D 157

Query: 258 TDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAE 317
             TPLH A+++ D E+V+LL + GA+    E +  RT LH+A   ++  +++LL   GA+
Sbjct: 158 GHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD 217

Query: 318 KSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFN 377
                +   G TPL  A  R    + ++L   GA       D  +P   + + +  +  +
Sbjct: 218 --PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRD 275

Query: 378 YLVNHG 383
               + 
Sbjct: 276 EGDEYD 281

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  226 bits (579), Expect = 5e-68
 Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 39/266 (14%)

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
             +++    +PLH A     ++I  +L+  GA+I++ ++D  TPL  A   N LE   YL
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63

Query: 380 VNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH--ININHQDKDGWTPLTCSIKGQA 436
           +  G  +        T LH+A++ G+ E+V YLL +  +++N QD  GWTP         
Sbjct: 64  IKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTP--------- 114

Query: 437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIY 495
                                    +  A  + ++ +V  L+    DIN  ++     ++
Sbjct: 115 -------------------------MIWATEYKHVDLVKLLLSKGSDINIRDNEENICLH 149

Query: 496 FAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNK 554
           +A  +  ++I  +LL    D+        + LH+A      + V   LS    V L++ +
Sbjct: 150 WAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKE 209

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNAD 580
           G TPL CA + +Q+     +  +  D
Sbjct: 210 GETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  223 bits (572), Expect = 4e-67
 Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 10/236 (4%)

Query: 288 EKSRN-RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKIL 346
            + +N R+ LH AA    VDI  +L   GA   ++  +    TPL  A     LE VK L
Sbjct: 6   MEHQNKRSPLHAAAEAGHVDICHMLVQAGAN--IDTCSEDQRTPLMEAAENNHLEAVKYL 63

Query: 347 LDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG-CDLSVP-EGERTALHMASQFGN 404
           +  GA ++  + +G T L  A  +   EV  YL+++G  D++   +G  T +  A+++ +
Sbjct: 64  IKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123

Query: 405 LEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTAL 462
           +++V  LL    +IN +D +    L   +  G   +++   ++ A  D+ A  + G + L
Sbjct: 124 VDLVKLLLSKGSDINIRDNEENICLHWAAFSG--CVDIAEILLAAKCDLHAVNIHGDSPL 181

Query: 463 HLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVA 517
           H+A        V   +    D+  +N  G+TP+  A  N+ +     + K   D A
Sbjct: 182 HIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQDSA 237

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  213 bits (546), Expect = 2e-63
 Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 37/268 (13%)

Query: 414 HININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLA 472
           H+N   + ++  +PL   +  G   +++ H +++AGA+I     D  T L  A    +L 
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAG--HVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLE 58

Query: 473 MVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGA-DVAVKMKSNFTCLHVA 530
            V YL+K    ++ ++  G T ++ A K  H E+   LL  G  DV  +    +T +  A
Sbjct: 59  AVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWA 118

Query: 531 CEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSP 589
            E+  +++V  LLS    +N++DN+    LH A     +++   L+ +  D+        
Sbjct: 119 TEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDL-------- 170

Query: 590 LHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKT 649
                                 +  N  G++PLH+A      + V   L+ ++ DV  K 
Sbjct: 171 ----------------------HAVNIHGDSPLHIAARENRYDCVVLFLS-RDSDVTLKN 207

Query: 650 KDGSTALFFACYDKRLDLVEILLEANAD 677
           K+G T L  A  + ++     + +A  D
Sbjct: 208 KEGETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  202 bits (517), Expect = 2e-59
 Identities = 56/240 (23%), Positives = 111/240 (46%), Gaps = 6/240 (2%)

Query: 642 NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDI 700
           +++   + ++  + L  A     +D+  +L++A A+++       TPL  A   +  L+ 
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENN-HLEA 59

Query: 701 IKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALN 760
           +K L+K GA V+  +      T LH A+ +G   ++ ++L+     D+  ++    T + 
Sbjct: 60  VKYLIKAGALVDPKDA--EGSTCLHLAAKKG-HYEVVQYLLSNGQMDVNCQDDGGWTPMI 116

Query: 761 FAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIK 820
           +A    ++DL+K LL  G+D +I D ++   L  +   G  +I + LL    D +     
Sbjct: 117 WATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVN-I 175

Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
           HG + LH AA  N+ D + L L  ++D+  ++K G+     A           +  A  +
Sbjct: 176 HGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  200 bits (512), Expect = 9e-59
 Identities = 66/302 (21%), Positives = 122/302 (40%), Gaps = 68/302 (22%)

Query: 480 HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMV 539
           H++   E+   ++P++ A +  H++I ++L++ GA+                        
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN------------------------ 36

Query: 540 SFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNM 599
                   ++       TPL  A   N LE   +LI + A +                  
Sbjct: 37  --------IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV------------------ 70

Query: 600 DMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFA 659
                       + ++  G T LH+A   G  E V++LL+   +DVN +   G T + +A
Sbjct: 71  ------------DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWA 118

Query: 660 CYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEAC 718
              K +DLV++LL   +D+N+ D      L+ A      +DI ++L+    D++  N   
Sbjct: 119 TEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG-CVDIAEILLAAKCDLHAVNI-- 175

Query: 719 YYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG 778
           +  +PLH A+      D     +   ++D+TL+N    T L  A+  + +     + KA 
Sbjct: 176 HGDSPLHIAAREN-RYDCVVLFLSR-DSDVTLKNKEGETPLQCASLNSQVWSALQMSKAL 233

Query: 779 AD 780
            D
Sbjct: 234 QD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  197 bits (504), Expect = 1e-57
 Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 18/240 (7%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
               L  A +    DI  +LV  G  ++   +           +  TPL  A  N+ +E 
Sbjct: 11  KRSPLHAAAEAGHVDICHMLVQAGANIDTCSE-----------DQRTPLMEAAENNHLEA 59

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           VK L++ GA     +     T LH+AA     ++V+ L   G    VN Q+  G TP+  
Sbjct: 60  VKYLIKAGALVDPKDAE-GSTCLHLAAKKGHYEVVQYLLSNGQ-MDVNCQDDGGWTPMIW 117

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGE 392
           A   K +++VK+LL KG+DIN  +++    L  A    C+++   L+   CDL       
Sbjct: 118 ATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHG 177

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGAD 450
            + LH+A++    + V   L    ++  ++K+G TPL C S+     +     + +A  D
Sbjct: 178 DSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNS--QVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  148 bits (377), Expect = 1e-40
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 6/183 (3%)

Query: 709 ADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNL 768
            +  + ++     +PLH A+  G   DI   LV+   A+I   + + RT L  AA  N+L
Sbjct: 2   MNFKMEHQ--NKRSPLHAAAEAG-HVDICHMLVQ-AGANIDTCSEDQRTPLMEAAENNHL 57

Query: 769 DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNA-DTNLRTIKHGSTALH 827
           + +K+L+KAGA  D  D + ++ L  + ++G YE+V  LL     D N +    G T + 
Sbjct: 58  EAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQD-DGGWTPMI 116

Query: 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKY 887
            A  +  +D++KLLL   +DIN  D    I  H A  +   DI   LL A  ++     +
Sbjct: 117 WATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIH 176

Query: 888 RMT 890
             +
Sbjct: 177 GDS 179

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  225 bits (577), Expect = 1e-67
 Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 9/233 (3%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
              +  A      +  + L + G +  V   +   +T LH A     +++VK  + KGA 
Sbjct: 10  TWDIVKATQYGIYERCRELVEAGYD--VRQPDKENVTLLHWAAINNRIDLVKYYISKGAI 67

Query: 353 INS-GNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNY 410
           ++  G D   TPL  A  Q  L +   L+ +G D S+ +GE  + +H+A+QFG+  +V Y
Sbjct: 68  VDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAY 127

Query: 411 LLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAK-LMDGTTALHLACY 467
           L+    +++  D++G TPL   + +   S++    ++     +         TALH A  
Sbjct: 128 LIAKGQDVDMMDQNGMTPLMWAAYRTH-SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVL 186

Query: 468 FGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVK 519
            GN  +++ L++   +++++N  G++ +  A +  ++ + N L +        
Sbjct: 187 AGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYD 239

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  217 bits (556), Expect = 9e-65
 Identities = 61/274 (22%), Positives = 110/274 (40%), Gaps = 42/274 (15%)

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           +   +      +  A +    E  + L++ G D+   + +  T L  A   N +++  Y 
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 380 VNHGCDLSVPEGE--RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQA 436
           ++ G  +    G+   T LH A++ G+L MV  L+K+  + +  D +G +          
Sbjct: 62  ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSC--------- 112

Query: 437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIY 495
                                    +HLA  FG+ ++V YL+    D++  +  G TP+ 
Sbjct: 113 -------------------------IHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLM 147

Query: 496 FAIKNNH-LEIFNLLLKLGADVAVKMKSN-FTCLHVACEFASIEMVSFLLSH-IGVNLQD 552
           +A    H ++   LLL     V +  K +  T LH A    +  ++S LL     V+ Q+
Sbjct: 148 WAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQN 207

Query: 553 NKGCTPLHCAIVGNQLEVFNHLINSNADITMYKN 586
            KG + L  A     + + NHL  +      Y N
Sbjct: 208 IKGESALDLAKQRKNVWMINHLQEARQAKG-YDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  213 bits (545), Expect = 3e-63
 Identities = 58/269 (21%), Positives = 104/269 (38%), Gaps = 37/269 (13%)

Query: 416 NINHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMV 474
           ++ H D      +   +  G    E    ++EAG D++    +  T LH A     + +V
Sbjct: 1   HMTHIDDYSTWDIVKATQYG--IYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLV 58

Query: 475 NYLVKH-IDINSE-NDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACE 532
            Y +     ++    DL  TP+++A +  HL +   L+K GAD ++      +C+H+A +
Sbjct: 59  KYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQ 118

Query: 533 FASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIV-GNQLEVFNHLINSNADITMYKNDSPL 590
           F    +V++L++    V++ D  G TPL  A    + ++    L+  N  +         
Sbjct: 119 FGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVN-------- 170

Query: 591 HLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTK 650
                                        T LH AV  G    +  LL     +V+ +  
Sbjct: 171 ----LGDKYH-----------------KNTALHWAVLAGNTTVISLLLE-AGANVDAQNI 208

Query: 651 DGSTALFFACYDKRLDLVEILLEANADVN 679
            G +AL  A   K + ++  L EA     
Sbjct: 209 KGESALDLAKQRKNVWMINHLQEARQAKG 237

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  206 bits (528), Expect = 7e-61
 Identities = 64/235 (27%), Positives = 107/235 (45%), Gaps = 11/235 (4%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             +  A      E  + L+E G +    +K  N T LH AAI   +D+VK     GA   
Sbjct: 11  WDIVKATQYGIYERCRELVEAGYDVRQPDKE-NVTLLHWAAINNRIDLVKYYISKGAI-- 67

Query: 320 VNVQ-NVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNY 378
           V+        TPLH A R+  L +V  L+  GAD +  + +GC+ +  A       +  Y
Sbjct: 68  VDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAY 127

Query: 379 LVNHGCDLSVP-EGERTALHMASQFGN-LEMVNYLLKH-ININHQDK-DGWTPLTC-SIK 433
           L+  G D+ +  +   T L  A+   + ++    LL   +++N  DK    T L    + 
Sbjct: 128 LIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLA 187

Query: 434 GQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSEND 488
           G  +  V   ++EAGA++ A+ + G +AL LA    N+ M+N+L +       ++
Sbjct: 188 G--NTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  206 bits (528), Expect = 7e-61
 Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 42/276 (15%)

Query: 611 VNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEI 670
           +   +D     +  A  +G  E  + L+     DV    K+  T L +A  + R+DLV+ 
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVE-AGYDVRQPDKENVTLLHWAAINNRIDLVKY 60

Query: 671 LLEANADVNLGDGTY--TPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYAS 728
            +   A V+   G    TPL+ A  +   L ++  L+KYGAD +L +      + +H A+
Sbjct: 61  YISKGAIVDQLGGDLNSTPLHWATRQG-HLSMVVQLMKYGADPSLIDG--EGCSCIHLAA 117

Query: 729 YRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF-GNNLDLLKFLLKAGADPDILDLK 787
             G    I  +L+ +   D+ + + N  T L +AA+  +++D  + LL      ++ D  
Sbjct: 118 QFG-HTSIVAYLIAK-GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKY 175

Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
                                              +TALH A       +I LLL+  A+
Sbjct: 176 H---------------------------------KNTALHWAVLAGNTTVISLLLEAGAN 202

Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEK 883
           ++A++  G+ A   A Q KN  ++  L +A      
Sbjct: 203 VDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  206 bits (527), Expect = 8e-61
 Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 20/246 (8%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
               +  A Q    +  + LV+ G  +   DK           E  T LH A +N+ I+L
Sbjct: 9   STWDIVKATQYGIYERCRELVEAGYDVRQPDK-----------ENVTLLHWAAINNRIDL 57

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           VK  + KGA    +    N T LH A     + +V  L  YGA+   ++ +  G + +H+
Sbjct: 58  VKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD--PSLIDGEGCSCIHL 115

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ-NCLEVFNYLVNHGCDLSVP--E 390
           A +     IV  L+ KG D++  + +G TPL  A  + + ++    L+     +++    
Sbjct: 116 AAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKY 175

Query: 391 GERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAG 448
            + TALH A   GN  +++ LL+   N++ Q+  G + L     +   ++ + + + EA 
Sbjct: 176 HKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK--NVWMINHLQEAR 233

Query: 449 ADIKAK 454
                 
Sbjct: 234 QAKGYD 239

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  191 bits (489), Expect = 1e-55
 Identities = 59/302 (19%), Positives = 105/302 (34%), Gaps = 68/302 (22%)

Query: 483 INSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFL 542
           +   +D     I  A +    E    L++ G DV                          
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDV-------------------------- 35

Query: 543 LSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMI 602
                    D +  T LH A + N++++  + I+  A +                     
Sbjct: 36  ------RQPDKENVTLLHWAAINNRIDLVKYYISKGAIV--------------------- 68

Query: 603 TYAMKYFDVNIE-NDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACY 661
                    +    D+  TPLH A   G L  V  L+     D +    +G + +  A  
Sbjct: 69  ---------DQLGGDLNSTPLHWATRQGHLSMVVQLMK-YGADPSLIDGEGCSCIHLAAQ 118

Query: 662 DKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYY 720
                +V  L+    DV++ D    TPL  A  +  S+D  ++L+ +   VNL ++  + 
Sbjct: 119 FGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKY-HK 177

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
            T LH+A   G    +   L+E   A++  +N    +AL+ A    N+ ++  L +A   
Sbjct: 178 NTALHWAVLAG-NTTVISLLLEA-GANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235

Query: 781 PD 782
             
Sbjct: 236 KG 237

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  127 bits (321), Expect = 4e-33
 Identities = 32/143 (22%), Positives = 59/143 (41%)

Query: 748 ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTL 807
           +T  +  +   +  A      +  + L++AG D    D ++ + L  +      ++V   
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 808 LEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN 867
           +   A  +       ST LH A     L ++  L+KY AD +  D  G    H A Q  +
Sbjct: 62  ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGH 121

Query: 868 WDIVTFLLDAGSNIEKATKYRMT 890
             IV +L+  G +++   +  MT
Sbjct: 122 TSIVAYLIAKGQDVDMMDQNGMT 144

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  111 bits (280), Expect = 1e-27
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 14/146 (9%)

Query: 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNS-DI 271
           +G   +  A Q   T I   L+ KG  ++++D               TPL  A   +  +
Sbjct: 108 EGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD-----QNGM------TPLMWAAYRTHSV 156

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           +  +LLL    +    +K    TALH A +  +  ++ LL + GA   V+ QN+ G + L
Sbjct: 157 DPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN--VDAQNIKGESAL 214

Query: 332 HIACRRKCLEIVKILLDKGADINSGN 357
            +A +RK + ++  L +        N
Sbjct: 215 DLAKQRKNVWMINHLQEARQAKGYDN 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  215 bits (551), Expect = 4e-64
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 13/233 (5%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEK--SVNVQNVAGLTPLHIACRRKCLEIVKILLDKG 350
            T LH+A +  ++  V  L +   +    +++ N    TPLH+A       +V++L+  G
Sbjct: 10  DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 69

Query: 351 ADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-----EGERTALHMASQFGNL 405
           A   + +  G T    A           L++     ++          TALH+A      
Sbjct: 70  ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 129

Query: 406 EMVNYLLKH-ININHQD-KDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTAL 462
           E V  LL+   +I+  D K G +PL         SL +   +++ GA++ A++  G++AL
Sbjct: 130 ETVQLLLERGADIDAVDIKSGRSPLIHAVENN--SLSMVQLLLQHGANVNAQMYSGSSAL 187

Query: 463 HLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGA 514
           H A   G L +V  LV+   D + +N    TP+  A     ++I        A
Sbjct: 188 HSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  214 bits (548), Expect = 1e-63
 Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 15/239 (6%)

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLD----KGADINSGNDDGCTPLFCAIAQNCLEV 375
               +  G TPLHIA  +  L  V  L++     G +++  N+   TPL  A+      V
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 376 FNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-----ININHQDKDGWTPLT 429
              LV  G          +TA H+A +  +   +  LL       +++  ++ DG T L 
Sbjct: 62  VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 121

Query: 430 C-SIKGQASLEVFHSIIEAGADIKAK-LMDGTTALHLACYFGNLAMVNYLVKH-IDINSE 486
                     E    ++E GADI A  +  G + L  A    +L+MV  L++H  ++N++
Sbjct: 122 VAVNTE--CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQ 179

Query: 487 NDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
              G + ++ A     L +   L++ GAD ++K   N T L VA     I+++    + 
Sbjct: 180 MYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  198 bits (505), Expect = 9e-58
 Identities = 60/279 (21%), Positives = 106/279 (37%), Gaps = 48/279 (17%)

Query: 611 VNIENDIGETPLHVAVSHGCLEAVKFLLN---TKNIDVNHKTKDGSTALFFACYDKRLDL 667
               ++ G+TPLH+AV  G L AV  L+N       +++       T L  A       +
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 668 VEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGA----DVNLTNEACYYMT 722
           V +L+ A A     D    T  + A     S   ++ L+   A    D+   N     +T
Sbjct: 62  VRLLVTAGASPMALDRHGQTAAHLACEHR-SPTCLRALLDSAAPGTLDLEARNY--DGLT 118

Query: 723 PLHYASYRGDCNDIARFLVEECNADITLRNFNN-RTALNFAAFGNNLDLLKFLLKAGADP 781
            LH A     C +  + L+E   ADI   +  + R+ L  A   N+L +++ LL+ GA+ 
Sbjct: 119 ALHVAVNTE-CQETVQLLLER-GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV 176

Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
           +                                       GS+ALH+A+    L +++ L
Sbjct: 177 NAQM----------------------------------YSGSSALHSASGRGLLPLVRTL 202

Query: 842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
           ++  AD + ++ +       A   +  DI+       ++
Sbjct: 203 VRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  190 bits (485), Expect = 4e-55
 Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 23/238 (9%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKHI-----DINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
           DG T LH+A   GNL  V+ LV        +++  N+L +TP++ A+      +  LL+ 
Sbjct: 8   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 67

Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-----IGVNLQDNKGCTPLHCAIVGN 566
            GA      +   T  H+ACE  S   +  LL       + +  ++  G T LH A+   
Sbjct: 68  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 127

Query: 567 QLEVFNHLINSNADITM--YKN-DSPLHLACATGNMDMITY-----AMKYFDVNIENDIG 618
             E    L+   ADI     K+  SPL  A    ++ M+       A    +VN +   G
Sbjct: 128 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGA----NVNAQMYSG 183

Query: 619 ETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANA 676
            + LH A   G L  V+ L+     D + K     T L  A   + +D++       A
Sbjct: 184 SSALHSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  147 bits (373), Expect = 5e-40
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 9/170 (5%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G  A   A + +     + L+D   P   +D               T LH A+     E 
Sbjct: 79  GQTAAHLACEHRSPTCLRALLDSAAPGT-LDLEARNYDGL------TALHVAVNTECQET 131

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           V+LLLE+GA+  A++    R+ L  A    S+ +V+LL  +GA   VN Q  +G + LH 
Sbjct: 132 VQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN--VNAQMYSGSSALHS 189

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG 383
           A  R  L +V+ L+  GAD +  N    TPL  A ++  +++        
Sbjct: 190 ASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 48.6 bits (117), Expect = 3e-06
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 11/70 (15%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G  AL  A       + + LV  G   +L +              DTPL  A     I++
Sbjct: 183 GSSALHSASGRGLLPLVRTLVRSGADSSLKNC-----------HNDTPLMVARSRRVIDI 231

Query: 274 VKLLLEKGAN 283
           ++    + A+
Sbjct: 232 LRGKATRPAS 241

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  211 bits (541), Expect = 6e-63
 Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 17/232 (7%)

Query: 327 GLTPLHIACRR-KCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385
              PLH AC   +  ++ ++L  K + +   + DG  PL  +++    E+ ++L++   +
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 386 LSVPEGE----RTALHMASQFGNLEMVNYLLKH---ININHQDKDGWTPL-TCSIKGQAS 437
           +++ +       T  H+A   GNLE+V  L       ++N     G T L     K    
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK--W 119

Query: 438 LEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH--IDINSENDLGKTPIY 495
            EV   +IE GA ++ K       LH A   G+L ++  L       +N ++  G TP++
Sbjct: 120 FEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLF 179

Query: 496 FAIKNNHLEIFNLLL-KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHI 546
            A+   H +   LL+ K GA+  +          VA    + ++  F L+++
Sbjct: 180 HALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVA---LNEQVKKFFLNNV 228

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  191 bits (489), Expect = 9e-56
 Identities = 50/227 (22%), Positives = 90/227 (39%), Gaps = 16/227 (7%)

Query: 292 NRTALHVAAIVESVDIV-KLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKG 350
           +   LH A +      V +LL    +   +  ++  G  PLH +   +  EI   LL K 
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSL--LLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 59

Query: 351 ADINSGN---DDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE---RTALHMASQFGN 404
            ++N  +   D G TP   A +   LEV   L +      + +      T LH+A     
Sbjct: 60  ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW 119

Query: 405 LEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAG-ADIKAKLMDGTTA 461
            E+  +L+++  ++  +DK    PL   +  G  SL++   +   G + +  +   G T 
Sbjct: 120 FEVSQFLIENGASVRIKDKFNQIPLHRAASVG--SLKLIELLCGLGKSAVNWQDKQGWTP 177

Query: 462 LHLACYFGNLAMVNYLV-KH-IDINSENDLGKTPIYFAIKNNHLEIF 506
           L  A   G+      LV K+  + +  ++ G      A+     + F
Sbjct: 178 LFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFF 224

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  191 bits (489), Expect = 1e-55
 Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 19/233 (8%)

Query: 260 TPLHSA-ILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK 318
            PLH A + N   ++ +LL  K +  L  ++   R  LH +   ++ +I   L       
Sbjct: 4   YPLHQACMENEFFKVQELLHSKPSLLLQKDQD-GRIPLHWSVSFQAHEITSFLLSKMEN- 61

Query: 319 SVNVQNVA---GLTPLHIACRRKCLEIVKILLDK--GADINSGNDDGCTPLFCAIAQNCL 373
            VN+ +     G TP HIAC    LE+VK L D+    D+N   + G T L  A+ +   
Sbjct: 62  -VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWF 120

Query: 374 EVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH--ININHQDKDGWTPLTC 430
           EV  +L+ +G  + +  +  +  LH A+  G+L+++  L       +N QDK GWTPL  
Sbjct: 121 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH 180

Query: 431 -SIKGQASLEVFHSIIEA-GADIKAKLMDGTTALHLACYFGNLAMVNYLVKHI 481
              +G    +    ++E  GA+       G  A  +A    N  +  + + ++
Sbjct: 181 ALAEG--HGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNV 228

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  183 bits (468), Expect = 5e-53
 Identities = 59/293 (20%), Positives = 97/293 (33%), Gaps = 76/293 (25%)

Query: 458 GTTALHLACYFGNLA-MVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
               LH AC       +   L      +  ++  G+ P+++++     EI + LL    +
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 516 V---AVKMKSNFTCLHVACEFASIEMVSFLLSHIG---VNLQDNKGCTPLHCAIVGNQLE 569
           V        S +T  H+AC   ++E+V  L        +N   N+G T LH A+     E
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121

Query: 570 VFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHG 629
           V   LI + A +                               I++   + PLH A S G
Sbjct: 122 VSQFLIENGASV------------------------------RIKDKFNQIPLHRAASVG 151

Query: 630 CLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLY 689
            L+ ++ L       VN + K G T LF A  +   D   +L+E                
Sbjct: 152 SLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVE---------------- 195

Query: 690 TALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE 742
                           KYGA+ +L +           A        + +F + 
Sbjct: 196 ----------------KYGAEYDLVDN--KGAKAEDVALN----EQVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  180 bits (460), Expect = 8e-52
 Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 18/219 (8%)

Query: 217 ALCWALQE-KKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVK 275
            L  A  E +   + +LL  K   L   D        R       PLH ++     E+  
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKD-----QDGR------IPLHWSVSFQAHEITS 53

Query: 276 LLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            LL K  N    +   +   T  H+A  V ++++VK L+D   +  +N     G+T LH+
Sbjct: 54  FLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHL 113

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG-CDLSVP-EG 391
           A  +K  E+ + L++ GA +   +     PL  A +   L++   L   G   ++   + 
Sbjct: 114 AVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQ 173

Query: 392 ERTALHMASQFGNLEMVNYLL-KH-ININHQDKDGWTPL 428
             T L  A   G+ +    L+ K+    +  D  G    
Sbjct: 174 GWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAE 212

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  177 bits (451), Expect = 1e-50
 Identities = 57/263 (21%), Positives = 93/263 (35%), Gaps = 40/263 (15%)

Query: 617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANA 676
           +   PLH A        V+ LL++K   +  K +DG   L ++   +  ++   LL    
Sbjct: 1   MSNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKME 60

Query: 677 DVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI 736
           +VNL D                         G             TP H A   G   ++
Sbjct: 61  NVNLDDYPD--------------------DSG------------WTPFHIACSVG-NLEV 87

Query: 737 ARFLVE-ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSS 795
            + L +     D+        T L+ A      ++ +FL++ GA   I D  +  PL  +
Sbjct: 88  VKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA 147

Query: 796 CRQGLYEIVDTLLEY-NADTNLRTIKHGSTALHTAAFHNQLDIIKLLL-KYNADINAEDK 853
              G  ++++ L     +  N +  K G T L  A      D   LL+ KY A+ +  D 
Sbjct: 148 ASVGSLKLIELLCGLGKSAVNWQD-KQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDN 206

Query: 854 YGKIAFHSACQAKNWDIVTFLLD 876
            G  A   A       +  F L+
Sbjct: 207 KGAKAEDVALNE---QVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  162 bits (413), Expect = 2e-45
 Identities = 56/267 (20%), Positives = 94/267 (35%), Gaps = 57/267 (21%)

Query: 589 PLHLACATGNMDMITYAMKYF-----DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNI 643
           PLH AC       +    +        +  ++  G  PLH +VS    E   FLL+ K  
Sbjct: 5   PLHQACMENEFFKVQ---ELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLS-KME 60

Query: 644 DVN---HKTKDGSTALFFACYDKRLDLVEILLE--ANADVNLGDGT-YTPLYTALMKDPS 697
           +VN   +    G T    AC    L++V+ L +     D+N       T L+ A+ K   
Sbjct: 61  NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK-W 119

Query: 698 LDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRT 757
            ++ + L++ GA V + ++  +   PLH A+  G    +   L     + +  ++    T
Sbjct: 120 FEVSQFLIENGASVRIKDK--FNQIPLHRAASVG-SLKLIELLCGLGKSAVNWQDKQGWT 176

Query: 758 ALNFAAFGNNLDLLKFLL-KAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
            L  A    + D    L+ K GA+ D++D                               
Sbjct: 177 PLFHALAEGHGDAAVLLVEKYGAEYDLVD------------------------------- 205

Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLK 843
                G+ A   A       + K  L 
Sbjct: 206 ---NKGAKAEDVAL---NEQVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  153 bits (389), Expect = 3e-42
 Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 17/206 (8%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G   L W++  +  +I   L+ K   +NL D     +         TP H A    ++E+
Sbjct: 36  GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPD--DSGW------TPFHIACSVGNLEV 87

Query: 274 VKLLLEKGANPLAIEKSRN-RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLH 332
           VK L ++   P   + +    T LH+A   +  ++ + L + GA   V +++     PLH
Sbjct: 88  VKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS--VRIKDKFNQIPLH 145

Query: 333 IACRRKCLEIVKILLDKG-ADINSGNDDGCTPLFCAIAQNCLEVFNYLV-NHGCDLSVP- 389
            A     L+++++L   G + +N  +  G TPLF A+A+   +    LV  +G +  +  
Sbjct: 146 RAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205

Query: 390 EGERTALHMASQFGNLEMVNYLLKHI 415
                A  +A    N ++  + L ++
Sbjct: 206 NKGAKAEDVAL---NEQVKKFFLNNV 228

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  146 bits (371), Expect = 6e-40
 Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 8/176 (4%)

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
             PLH A    +   +   L  +  + +  ++ + R  L+++      ++  FLL    +
Sbjct: 3   NYPLHQACMENEFFKVQELLHSK-PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 781 PDILDLKDTS---PLLSSCRQGLYEIVDTLLE--YNADTNLRTIKHGSTALHTAAFHNQL 835
            ++ D  D S   P   +C  G  E+V +L +     D N  T   G T LH A      
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKIT-NQGVTCLHLAVGKKWF 120

Query: 836 DIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN-IEKATKYRMT 890
           ++ + L++  A +  +DK+ +I  H A    +  ++  L   G + +    K   T
Sbjct: 121 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT 176

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  208 bits (532), Expect = 2e-61
 Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 22/246 (8%)

Query: 260 TPLHSAILNSD-------------IELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVD 306
           TPL  A  +                 ++   + +GA+          TALH+AA     D
Sbjct: 12  TPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSD 71

Query: 307 IVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA-DINSGNDDGCTPLF 365
             K L +  A+   N+Q+  G TPLH A       + +IL+   A D+++   DG TPL 
Sbjct: 72  AAKRLLEASAD--ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 129

Query: 366 CAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKD 423
            A       +   L+N   D++   +  ++ALH A+   N++    LLK+  N + Q+  
Sbjct: 130 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 189

Query: 424 GWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLV-KHI 481
             TPL   + +G  S E    +++  A+             +A    +  +V  L  +H 
Sbjct: 190 EETPLFLAAREG--SYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247

Query: 482 DINSEN 487
             +  +
Sbjct: 248 HHHHHH 253

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  206 bits (527), Expect = 1e-60
 Identities = 58/281 (20%), Positives = 101/281 (35%), Gaps = 53/281 (18%)

Query: 320 VNVQNVAGLTPLHIACRRK-------------CLEIVKILLDKGADI-NSGNDDGCTPLF 365
           VNV+   G TPL IA                    ++   + +GA + N  +  G T L 
Sbjct: 3   VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALH 62

Query: 366 CAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH--ININHQDK 422
            A   +  +    L+    D ++     RT LH A       +   L+++   +++ +  
Sbjct: 63  LAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH 122

Query: 423 DGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-I 481
           DG TP                                  L LA       M+  L+    
Sbjct: 123 DGTTP----------------------------------LILAARLAVEGMLEDLINSHA 148

Query: 482 DINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSF 541
           D+N+ +DLGK+ +++A   N+++   +LLK GA+  ++     T L +A    S E    
Sbjct: 149 DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKV 208

Query: 542 LLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
           LL H    ++ D+    P   A      ++   L   +   
Sbjct: 209 LLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  205 bits (525), Expect = 2e-60
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 21/241 (8%)

Query: 293 RTALHVAAI-------------VESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKC 339
            T L +A+               ++  ++      GA    N  +  G T LH+A R   
Sbjct: 11  FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLH-NQTDRTGETALHLAARYSR 69

Query: 340 LEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG-CDLSVPEGE-RTALH 397
            +  K LL+  AD N  ++ G TPL  A++ +   VF  L+ +   DL     +  T L 
Sbjct: 70  SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 129

Query: 398 MASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKL 455
           +A++     M+  L+    ++N  D  G + L   +     +++    +++ GA+   + 
Sbjct: 130 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN--NVDAAVVLLKNGANKDMQN 187

Query: 456 MDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGA 514
               T L LA   G+      L+ H  + +  + + + P   A +  H +I  LL     
Sbjct: 188 NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247

Query: 515 D 515
            
Sbjct: 248 H 248

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  199 bits (509), Expect = 3e-58
 Identities = 62/281 (22%), Positives = 111/281 (39%), Gaps = 47/281 (16%)

Query: 415 ININHQDKDGWTPLTCSIKGQASLEVFHSI------------IEAGADIK-AKLMDGTTA 461
           +++N +  DG+TPL  +      LE  +S             I  GA +       G TA
Sbjct: 1   MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETA 60

Query: 462 LHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGA-DVAVK 519
           LHLA  +        L++   D N ++++G+TP++ A+  +   +F +L++  A D+  +
Sbjct: 61  LHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR 120

Query: 520 MKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSN 578
           M    T L +A   A   M+  L++    VN  D+ G + LH A   N ++    L+ + 
Sbjct: 121 MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 180

Query: 579 ADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLL 638
           A+                               +++N+  ETPL +A   G  E  K LL
Sbjct: 181 ANK------------------------------DMQNNREETPLFLAAREGSYETAKVLL 210

Query: 639 NTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN 679
           +    + +            A      D+V +L   +   +
Sbjct: 211 D-HFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHH 250

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  193 bits (494), Expect = 3e-56
 Identities = 62/274 (22%), Positives = 108/274 (39%), Gaps = 36/274 (13%)

Query: 450 DIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLL 509
           D+  +  DG T L +A   G                    G        + +   + +  
Sbjct: 2   DVNVRGPDGFTPLMIASCSGG-------------------GLETGNSEEEEDAPAVISDF 42

Query: 510 LKLGADV-AVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQ 567
           +  GA +     ++  T LH+A  ++  +    LL      N+QDN G TPLH A+  + 
Sbjct: 43  IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA 102

Query: 568 LEVFNHLIN---SNADITMYKNDSPLHLACATGNMDMITY-----AMKYFDVNIENDIGE 619
             VF  LI    ++ D  M+   +PL LA       M+       A    DVN  +D+G+
Sbjct: 103 QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA----DVNAVDDLGK 158

Query: 620 TPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN 679
           + LH A +   ++A   LL     + + +     T LF A  +   +  ++LL+  A+ +
Sbjct: 159 SALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217

Query: 680 LGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVN 712
           + D     P   A  +    DI+++L       +
Sbjct: 218 ITDHMDRLPRDIAQERM-HHDIVRLLDLEHHHHH 250

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  186 bits (476), Expect = 1e-53
 Identities = 59/274 (21%), Positives = 99/274 (36%), Gaps = 28/274 (10%)

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           DVN+    G TPL +A   G                      G         +    ++ 
Sbjct: 2   DVNVRGPDGFTPLMIASCSG---------------------GGLETGNSEEEEDAPAVIS 40

Query: 670 ILLEANADV-NLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYA 727
             +   A + N  D T  T L+ A       D  K L++  AD N+ +      TPLH A
Sbjct: 41  DFIYQGASLHNQTDRTGETALHLAARYS-RSDAAKRLLEASADANIQDN--MGRTPLHAA 97

Query: 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
                   + + L+     D+  R  +  T L  AA      +L+ L+ + AD + +D  
Sbjct: 98  VSAD-AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL 156

Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
             S L  +      +    LL+  A+ +++      T L  AA     +  K+LL + A+
Sbjct: 157 GKSALHWAAAVNNVDAAVVLLKNGANKDMQN-NREETPLFLAAREGSYETAKVLLDHFAN 215

Query: 848 INAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
            +  D   ++    A +  + DIV  L     + 
Sbjct: 216 RDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  185 bits (473), Expect = 3e-53
 Identities = 63/305 (20%), Positives = 119/305 (39%), Gaps = 60/305 (19%)

Query: 481 IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVS 540
           +D+N     G TP+  A  +                           +   E  +  ++S
Sbjct: 1   MDVNVRGPDGFTPLMIASCSGGGL--------------------ETGNSEEEEDAPAVIS 40

Query: 541 FLLSHIGVNLQ---DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATG 597
             +   G +L    D  G T LH A   ++ +    L+ ++AD                 
Sbjct: 41  DFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA---------------- 83

Query: 598 NMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALF 657
                         NI++++G TPLH AVS       + L+  +  D++ +  DG+T L 
Sbjct: 84  --------------NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 129

Query: 658 FACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNE 716
            A       ++E L+ ++ADVN  D    + L+ A   + ++D   +L+K GA+ ++ N 
Sbjct: 130 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN-NVDAAVVLLKNGANKDMQNN 188

Query: 717 ACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK 776
                TPL  A+  G   + A+ L++   A+  + +  +R   + A    + D+++ L  
Sbjct: 189 --REETPLFLAAREG-SYETAKVLLDH-FANRDITDHMDRLPRDIAQERMHHDIVRLLDL 244

Query: 777 AGADP 781
                
Sbjct: 245 EHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  168 bits (428), Expect = 3e-47
 Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 15/209 (7%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G  AL  A +  ++D AK L++     N+ D               TPLH+A+      +
Sbjct: 57  GETALHLAARYSRSDAAKRLLEASADANIQDN-----------MGRTPLHAAVSADAQGV 105

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            ++L+   A  L        T L +AA +    +++ L +  A+  VN  +  G + LH 
Sbjct: 106 FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD--VNAVDDLGKSALHW 163

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGE 392
           A     ++   +LL  GA+ +  N+   TPLF A  +   E    L++H  +  +    +
Sbjct: 164 AAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 223

Query: 393 RTALHMASQFGNLEMVNYL-LKHININHQ 420
           R    +A +  + ++V  L L+H + +H 
Sbjct: 224 RLPRDIAQERMHHDIVRLLDLEHHHHHHH 252

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  168 bits (427), Expect = 4e-47
 Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 27/250 (10%)

Query: 643 IDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIK 702
           +DVN +  DG T L  A                       G       +  ++ +  +I 
Sbjct: 1   MDVNVRGPDGFTPLMIASCS--------------------GGGLETGNSEEEEDAPAVIS 40

Query: 703 MLVKYGADV-NLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNF 761
             +  GA + N T+      T LH A+     +D A+ L+E  +AD  +++   RT L+ 
Sbjct: 41  DFIYQGASLHNQTDR--TGETALHLAARYS-RSDAAKRLLE-ASADANIQDNMGRTPLHA 96

Query: 762 AAFGNNLDLLKFLLKAGA-DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIK 820
           A   +   + + L++  A D D      T+PL+ + R  +  +++ L+  +AD N     
Sbjct: 97  AVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD-D 155

Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
            G +ALH AA  N +D   +LLK  A+ + ++   +     A +  +++    LLD  +N
Sbjct: 156 LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 215

Query: 881 IEKATKYRMT 890
            +        
Sbjct: 216 RDITDHMDRL 225

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  203 bits (520), Expect = 4e-60
 Identities = 57/249 (22%), Positives = 96/249 (38%), Gaps = 40/249 (16%)

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
            ++   + +GA+          TALH+AA     D  K L +  A+   N+Q+  G TPL
Sbjct: 5   AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD--ANIQDNMGRTPL 62

Query: 332 HIACRRKCLEIVKILLDKGA-DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP- 389
           H A       + +IL+   A D+++   DG TPL  A       +   L+N   D++   
Sbjct: 63  HAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD 122

Query: 390 EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
           +  ++ALH A+   N++    LLK+  N + Q+    TP                     
Sbjct: 123 DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP--------------------- 161

Query: 449 ADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFN 507
                        L LA   G+      L+ H  + +  + + + P   A +  H +I  
Sbjct: 162 -------------LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVR 208

Query: 508 LLLKLGADV 516
           LL +     
Sbjct: 209 LLDEYNLVR 217

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  189 bits (484), Expect = 4e-55
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 9/218 (4%)

Query: 371 NCLEVFNYLVNHGCDLS--VPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTP 427
           +   V +  +  G  L         TALH+A+++   +    LL+   + N QD  G TP
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 428 LTC-SIKGQASLEVFHSIIEAGA-DIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDIN 484
           L         +  VF  +I   A D+ A++ DGTT L LA       M+  L+    D+N
Sbjct: 62  LHAAVSAD--AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN 119

Query: 485 SENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLS 544
           + +DLGK+ +++A   N+++   +LLK GA+  ++     T L +A    S E    LL 
Sbjct: 120 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD 179

Query: 545 H-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
           H    ++ D+    P   A      ++   L   N   
Sbjct: 180 HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  187 bits (478), Expect = 2e-54
 Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 35/247 (14%)

Query: 437 SLEVFHSIIEAGADIK-AKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPI 494
           +  V    I  GA +       G TALHLA  +        L++   D N ++++G+TP+
Sbjct: 3   APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPL 62

Query: 495 YFAIKNNHLEIFNLLLKLGA-DVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQD 552
           + A+  +   +F +L++  A D+  +M    T L +A   A   M+  L++    VN  D
Sbjct: 63  HAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD 122

Query: 553 NKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVN 612
           + G + LH A   N ++    L+ + A+                               +
Sbjct: 123 DLGKSALHWAAAVNNVDAAVVLLKNGANK------------------------------D 152

Query: 613 IENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILL 672
           ++N+  ETPL +A   G  E  K LL+    + +            A      D+V +L 
Sbjct: 153 MQNNREETPLFLAAREGSYETAKVLLD-HFANRDITDHMDRLPRDIAQERMHHDIVRLLD 211

Query: 673 EANADVN 679
           E N   +
Sbjct: 212 EYNLVRS 218

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  170 bits (434), Expect = 2e-48
 Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 40/250 (16%)

Query: 535 SIEMVSFLLSHIGVNL---QDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLH 591
           +  ++S  +   G +L    D  G T LH A   ++ +    L+ ++AD           
Sbjct: 3   APAVISDFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA---------- 51

Query: 592 LACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKD 651
                               NI++++G TPLH AVS       + L+  +  D++ +  D
Sbjct: 52  --------------------NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 91

Query: 652 GSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGAD 710
           G+T L  A       ++E L+ ++ADVN  D    + L+ A   + ++D   +L+K GA+
Sbjct: 92  GTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN-NVDAAVVLLKNGAN 150

Query: 711 VNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDL 770
            ++ N      TPL  A+  G   + A+ L++   A+  + +  +R   + A    + D+
Sbjct: 151 KDMQNN--REETPLFLAAREG-SYETAKVLLDH-FANRDITDHMDRLPRDIAQERMHHDI 206

Query: 771 LKFLLKAGAD 780
           ++ L +    
Sbjct: 207 VRLLDEYNLV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  167 bits (425), Expect = 3e-47
 Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 14/202 (6%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G  AL  A +  ++D AK L++     N+ D     N  R      TPLH+A+      +
Sbjct: 25  GETALHLAARYSRSDAAKRLLEASADANIQD-----NMGR------TPLHAAVSADAQGV 73

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            ++L+   A  L        T L +AA +    +++ L +  A+  VN  +  G + LH 
Sbjct: 74  FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD--VNAVDDLGKSALHW 131

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGE 392
           A     ++   +LL  GA+ +  N+   TPLF A  +   E    L++H  +  +    +
Sbjct: 132 AAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 191

Query: 393 RTALHMASQFGNLEMVNYLLKH 414
           R    +A +  + ++V  L ++
Sbjct: 192 RLPRDIAQERMHHDIVRLLDEY 213

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  167 bits (425), Expect = 3e-47
 Identities = 58/259 (22%), Positives = 100/259 (38%), Gaps = 43/259 (16%)

Query: 629 GCLEAVKFLLNTKNIDV-NHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YT 686
                +   +  +   + N   + G TAL  A    R D  + LLEA+AD N+ D    T
Sbjct: 2   DAPAVISDFIY-QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60

Query: 687 PLYTALMKDPSLDIIKMLVKYGA-DVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN 745
           PL+ A+  D +  + ++L++  A D++         TPL  A+       +   L+   +
Sbjct: 61  PLHAAVSAD-AQGVFQILIRNRATDLDARMH--DGTTPLILAARLA-VEGMLEDLIN-SH 115

Query: 746 ADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVD 805
           AD+   +   ++AL++AA  NN+D    LLK GA+ D+ +                    
Sbjct: 116 ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN-------------------- 155

Query: 806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQA 865
                             T L  AA     +  K+LL + A+ +  D   ++    A + 
Sbjct: 156 --------------NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQER 201

Query: 866 KNWDIVTFLLDAGSNIEKA 884
            + DIV  L +        
Sbjct: 202 MHHDIVRLLDEYNLVRSPQ 220

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  154 bits (392), Expect = 1e-42
 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 7/196 (3%)

Query: 697 SLDIIKMLVKYGADV-NLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNN 755
           +  +I   +  GA + N T+      T LH A+     +D A+ L+E  +AD  +++   
Sbjct: 3   APAVISDFIYQGASLHNQTDR--TGETALHLAARYS-RSDAAKRLLE-ASADANIQDNMG 58

Query: 756 RTALNFAAFGNNLDLLKFLLKAGA-DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADT 814
           RT L+ A   +   + + L++  A D D      T+PL+ + R  +  +++ L+  +AD 
Sbjct: 59  RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV 118

Query: 815 NLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           N      G +ALH AA  N +D   +LLK  A+ + ++   +     A +  +++    L
Sbjct: 119 NAVD-DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL 177

Query: 875 LDAGSNIEKATKYRMT 890
           LD  +N +        
Sbjct: 178 LDHFANRDITDHMDRL 193

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  110 bits (279), Expect = 1e-27
 Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 16/142 (11%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G   L  A +     + + L++    +N VD               + LH A   ++++ 
Sbjct: 92  GTTPLILAARLAVEGMLEDLINSHADVNAVDD-----------LGKSALHWAAAVNNVDA 140

Query: 274 VKLLLEKGANPLAIEKSRN-RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLH 332
             +LL+ GAN     ++    T L +AA   S +  K+L D+ A    ++ +     P  
Sbjct: 141 AVVLLKNGANK--DMQNNREETPLFLAAREGSYETAKVLLDHFAN--RDITDHMDRLPRD 196

Query: 333 IACRRKCLEIVKILLDKGADIN 354
           IA  R   +IV++L +     +
Sbjct: 197 IAQERMHHDIVRLLDEYNLVRS 218

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  194 bits (496), Expect = 1e-56
 Identities = 62/266 (23%), Positives = 93/266 (34%), Gaps = 49/266 (18%)

Query: 288 EKSRN-RTALHVAAIVES----VDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEI 342
           + + +  + LH+A I E     +++++ +    A   +N QN    TPLH+A      EI
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAF--LNFQNNLQQTPLHLAVITNQPEI 60

Query: 343 VKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG-------ERTA 395
            + LL  G D    +  G TPL  A  Q CL     L        +            T 
Sbjct: 61  AEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTC 120

Query: 396 LHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAK- 454
           LH+AS  G L +V  L+                                   GAD+ A+ 
Sbjct: 121 LHLASIHGYLGIVELLVSL---------------------------------GADVNAQE 147

Query: 455 LMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLG 513
             +G TALHLA    N  +V+ L+K   D+N     G +P           I   L +L 
Sbjct: 148 PCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT 207

Query: 514 ADVAVKMKSNFTCLHVACEFASIEMV 539
            +    +  +        E    E  
Sbjct: 208 LENLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  191 bits (487), Expect = 2e-55
 Identities = 54/261 (20%), Positives = 98/261 (37%), Gaps = 51/261 (19%)

Query: 259 DTPLHSAILN----SDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDY 314
           D+ LH AI++      +E+++ +    A        + +T LH+A I    +I + L   
Sbjct: 9   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQ-QTPLHLAVITNQPEIAEALLGA 67

Query: 315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD------INSGNDDGCTPLFCAI 368
           G +    +++  G TPLH+AC + CL  V +L            + + N +G T L  A 
Sbjct: 68  GCD--PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 125

Query: 369 AQNCLEVFNYLVNHGCDLSVPEGE--RTALHMASQFGNLEMVNYLLKH-ININHQDKDGW 425
               L +   LV+ G D++  E    RTALH+A    N ++V+ LLK   ++N     G+
Sbjct: 126 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 185

Query: 426 TPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDIN 484
           +P                                    L     +  +   L +  ++  
Sbjct: 186 SP----------------------------------YQLTWGRPSTRIQQQLGQLTLENL 211

Query: 485 SENDLGKTPIYFAIKNNHLEI 505
                 +    +  ++   E 
Sbjct: 212 QMLPESEDEESYDTESEFTEF 232

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  173 bits (441), Expect = 3e-49
 Identities = 53/244 (21%), Positives = 84/244 (34%), Gaps = 44/244 (18%)

Query: 452 KAKLMDGTTALHLACYFGN----LAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIF 506
           +    DG + LHLA         + ++  +      +N +N+L +TP++ A+  N  EI 
Sbjct: 2   QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIA 61

Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-------IGVNLQDNKGCTPL 559
             LL  G D  ++     T LH+ACE   +  V  L            +   +  G T L
Sbjct: 62  EALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCL 121

Query: 560 HCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNI-ENDIG 618
           H A +   L +   L++  AD+                              N  E   G
Sbjct: 122 HLASIHGYLGIVELLVSLGADV------------------------------NAQEPCNG 151

Query: 619 ETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADV 678
            T LH+AV     + V  LL     DVN  T  G +            + + L +   + 
Sbjct: 152 RTALHLAVDLQNPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210

Query: 679 NLGD 682
               
Sbjct: 211 LQML 214

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  161 bits (411), Expect = 4e-45
 Identities = 54/264 (20%), Positives = 88/264 (33%), Gaps = 48/264 (18%)

Query: 618 GETPLHVAVSHGC----LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE 673
           G++ LH+A+ H      +E ++ +       +N +     T L  A    + ++ E LL 
Sbjct: 8   GDSFLHLAIIHEEKALTMEVIRQVKG-DLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 66

Query: 674 ANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLT---NEACYY-MTPLHYAS 728
           A  D  L D    TPL+ A  +   L  + +L +     +L        Y   T LH AS
Sbjct: 67  AGCDPELRDFRGNTPLHLACEQG-CLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 125

Query: 729 YRGDCNDIARFLVEECNADITLR-NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787
             G    I   LV    AD+  +   N RTAL+ A    N DL+  LLK GAD + +   
Sbjct: 126 IHG-YLGIVELLVS-LGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT-- 181

Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD 847
                                             G +            I + L +   +
Sbjct: 182 --------------------------------YQGYSPYQLTWGRPSTRIQQQLGQLTLE 209

Query: 848 INAEDKYGKIAFHSACQAKNWDIV 871
                   +       +++  +  
Sbjct: 210 NLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  159 bits (404), Expect = 3e-44
 Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 14/214 (6%)

Query: 682 DGTYTPLYTALM---KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIAR 738
           DG  + L+ A++   K  ++++I+ +    A +N  N      TPLH A       +IA 
Sbjct: 7   DG-DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN--LQQTPLHLAVITN-QPEIAE 62

Query: 739 FLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPD---ILDLKDTS---PL 792
            L+     D  LR+F   T L+ A     L  +  L ++   P    IL   + +    L
Sbjct: 63  ALLG-AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCL 121

Query: 793 LSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED 852
             +   G   IV+ L+   AD N +   +G TALH A      D++ LLLK  AD+N   
Sbjct: 122 HLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 181

Query: 853 KYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886
             G   +       +  I   L        +   
Sbjct: 182 YQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLP 215

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  147 bits (374), Expect = 3e-40
 Identities = 48/203 (23%), Positives = 75/203 (36%), Gaps = 20/203 (9%)

Query: 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIE 272
                L  A+   + +IA+ L+  G    L D              +TPLH A     + 
Sbjct: 44  LQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-----------RGNTPLHLACEQGCLA 92

Query: 273 LVKLLLEKGANPLAI----EKSRN-RTALHVAAIVESVDIVKLLFDYGAEKSVNVQ-NVA 326
            V +L +    P         + N  T LH+A+I   + IV+LL   GA+  VN Q    
Sbjct: 93  SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD--VNAQEPCN 150

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
           G T LH+A   +  ++V +LL  GAD+N     G +P      +    +   L     + 
Sbjct: 151 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210

Query: 387 SVPEGE-RTALHMASQFGNLEMV 408
                E        ++    E  
Sbjct: 211 LQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  105 bits (264), Expect = 2e-25
 Identities = 27/144 (18%), Positives = 51/144 (35%), Gaps = 11/144 (7%)

Query: 754 NNRTALNFAAFGNN----LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLE 809
           +  + L+ A         +++++ +    A  +  +    +PL  +      EI + LL 
Sbjct: 7   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 66

Query: 810 YNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD------INAEDKYGKIAFHSAC 863
              D  LR    G+T LH A     L  + +L +          + A +  G    H A 
Sbjct: 67  AGCDPELRD-FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 125

Query: 864 QAKNWDIVTFLLDAGSNIEKATKY 887
                 IV  L+  G+++      
Sbjct: 126 IHGYLGIVELLVSLGADVNAQEPC 149

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 72.2 bits (178), Expect = 4e-14
 Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 820 KHGSTALHTAAFHNQ----LDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL 875
           + G + LH A  H +    +++I+ +    A +N ++   +   H A      +I   LL
Sbjct: 6   EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALL 65

Query: 876 DAGSNIEKATKYRMT 890
            AG + E       T
Sbjct: 66  GAGCDPELRDFRGNT 80

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  187 bits (478), Expect = 1e-54
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 10/196 (5%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
              L  A   ++  + ++L D   +  V+  +  G TPL+IA     +EI K L+D+GAD
Sbjct: 7   GALLEAANQRDTKKVKEILQDTTYQ--VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD 64

Query: 353 INSGNDDGCTPLFCAIAQNCLEVFNYLVNHG-CDLSVP-EGERTALHMASQFGNLEMVNY 410
           IN  N    +P   A AQ   E+  Y++ H   DL+        AL  A++ G+++ V  
Sbjct: 65  INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKL 124

Query: 411 LLKH--ININHQDKDGWTPL----TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHL 464
           LL+    +I+ Q+  G+T L          Q   ++   ++E GAD   K   G TA+  
Sbjct: 125 LLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDY 184

Query: 465 ACYFGNLAMVNYLVKH 480
           A   G   +   L ++
Sbjct: 185 ANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  179 bits (458), Expect = 6e-52
 Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 44/234 (18%)

Query: 322 VQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN 381
           ++       L  A +R   ++ +IL D    ++  + +G TPL  A+  N +E+   L++
Sbjct: 1   MKTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALID 60

Query: 382 HGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH--ININHQDKDGWTPLTCSIKGQASL 438
            G D+++      +    A   G  E++ Y+LKH   ++N  ++ G              
Sbjct: 61  RGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNA----------- 109

Query: 439 EVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH--IDINSENDLGKTPIYF 496
                                  L  A   G++  V  L++    DI+ +ND G T +  
Sbjct: 110 -----------------------LIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIE 146

Query: 497 AI-----KNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
           A+        + +I  LL++ GAD ++K  S  T +  A +    E+   L  +
Sbjct: 147 AVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  162 bits (413), Expect = 8e-46
 Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 40/228 (17%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           +    L  A       +   L      ++  +  G TP+  A+ NN +EI   L+  GAD
Sbjct: 5   EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD 64

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSH--IGVNLQDNKGCTPLHCAIVGNQLEVFNH 573
           + ++   + +    A      E+++++L H    +N  +  G   L  A     ++    
Sbjct: 65  INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKL 124

Query: 574 LINS-NADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAV-----S 627
           L+     DI                              + +ND G T L  AV     +
Sbjct: 125 LLEDGREDI------------------------------DFQNDFGYTALIEAVGLREGN 154

Query: 628 HGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEAN 675
               + VK L+     D + K   G TA+ +A      ++ +IL + N
Sbjct: 155 QLYQDIVKLLME-NGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  160 bits (407), Expect = 5e-45
 Identities = 50/235 (21%), Positives = 91/235 (38%), Gaps = 36/235 (15%)

Query: 613 IENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILL 672
           ++       L  A      +  + L +     V+    +G+T L  A ++  +++ + L+
Sbjct: 1   MKTYEVGALLEAANQRDTKKVKEILQD-TTYQVDEVDTEGNTPLNIAVHNNDIEIAKALI 59

Query: 673 EANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGA-DVNLTNEACYYMTPLHYASYR 730
           +  AD+NL +    +P   A  +    +I+  ++K+   D+N  N   Y    L  A+ +
Sbjct: 60  DRGADINLQNSISDSPYLYAGAQG-RTEILAYMLKHATPDLNKHNR--YGGNALIPAAEK 116

Query: 731 GDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTS 790
           G   D  + L+E+   DI  +N    TAL  A                            
Sbjct: 117 G-HIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREG---------------------- 153

Query: 791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
                  Q   +IV  L+E  AD +++    G TA+  A      +I K+L +YN
Sbjct: 154 ------NQLYQDIVKLLMENGADQSIKD-NSGRTAMDYANQKGYTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  160 bits (407), Expect = 5e-45
 Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 40/232 (17%)

Query: 518 VKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLIN 576
           +K       L  A +  + ++   L      V+  D +G TPL+ A+  N +E+   LI+
Sbjct: 1   MKTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALID 60

Query: 577 SNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKF 636
             ADI                              N++N I ++P   A + G  E + +
Sbjct: 61  RGADI------------------------------NLQNSISDSPYLYAGAQGRTEILAY 90

Query: 637 LLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA-NADVNLGDGT-YTPLYTALMK 694
           +L     D+N   + G  AL  A     +D V++LLE    D++  +   YT L  A+  
Sbjct: 91  MLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGL 150

Query: 695 DPS----LDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE 742
                   DI+K+L++ GAD ++ +      T + YA+ +G   +I++ L +
Sbjct: 151 REGNQLYQDIVKLLMENGADQSIKDN--SGRTAMDYANQKG-YTEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  159 bits (406), Expect = 7e-45
 Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 24/210 (11%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
               L  A Q     + ++L D    ++ VD            E +TPL+ A+ N+DIE+
Sbjct: 6   VGALLEAANQRDTKKVKEILQDTTYQVDEVDT-----------EGNTPLNIAVHNNDIEI 54

Query: 274 VKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
            K L+++GA+   I    +   +    A      +I+  +  +     +N  N  G   L
Sbjct: 55  AKALIDRGAD---INLQNSISDSPYLYAGAQGRTEILAYMLKHATPD-LNKHNRYGGNAL 110

Query: 332 HIACRRKCLEIVKILLDKG-ADINSGNDDGCTPLFCAIA-----QNCLEVFNYLVNHGCD 385
             A  +  ++ VK+LL+ G  DI+  ND G T L  A+      Q   ++   L+ +G D
Sbjct: 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD 170

Query: 386 LSVPEGE-RTALHMASQFGNLEMVNYLLKH 414
            S+ +   RTA+  A+Q G  E+   L ++
Sbjct: 171 QSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  135 bits (342), Expect = 2e-36
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 10/179 (5%)

Query: 719 YYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG 778
                L  A+ R     +   L +     +   +    T LN A   N++++ K L+  G
Sbjct: 5   EVGALLEAANQRD-TKKVKEILQD-TTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 779 ADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNA-DTNLRTIKHGSTALHTAAFHNQLDI 837
           AD ++ +    SP L +  QG  EI+  +L++   D N    ++G  AL  AA    +D 
Sbjct: 63  ADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHN-RYGGNALIPAAEKGHIDN 121

Query: 838 IKLLLKY-NADINAEDKYGKIAFHSACQAKNW-----DIVTFLLDAGSNIEKATKYRMT 890
           +KLLL+    DI+ ++ +G  A   A   +       DIV  L++ G++         T
Sbjct: 122 VKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRT 180

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  129 bits (328), Expect = 2e-34
 Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 17/175 (9%)

Query: 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIE 272
           +G   L  A+     +IAK L+D+G  +NL +             +D+P   A      E
Sbjct: 38  EGNTPLNIAVHNNDIEIAKALIDRGADINLQNS-----------ISDSPYLYAGAQGRTE 86

Query: 273 LVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLH 332
           ++  +L+     L         AL  AA    +D VKLL + G E  ++ QN  G T L 
Sbjct: 87  ILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED-IDFQNDFGYTALI 145

Query: 333 IAC-----RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH 382
            A       +   +IVK+L++ GAD +  ++ G T +  A  +   E+   L  +
Sbjct: 146 EAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  116 bits (292), Expect = 1e-29
 Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 3/143 (2%)

Query: 750 LRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLE 809
           ++ +     L  A   +   + + L       D +D +  +PL  +      EI   L++
Sbjct: 1   MKTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALID 60

Query: 810 YNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA-DINAEDKYGKIAFHSACQAKNW 868
             AD NL+      +    A    + +I+  +LK+   D+N  ++YG  A   A +  + 
Sbjct: 61  RGADINLQN-SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHI 119

Query: 869 DIVTFLLDAGS-NIEKATKYRMT 890
           D V  LL+ G  +I+    +  T
Sbjct: 120 DNVKLLLEDGREDIDFQNDFGYT 142

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  181 bits (461), Expect = 1e-52
 Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 4/170 (2%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             +H      +++ +K  L KG N +     R  T L  A+    ++ V+ L ++GA+  
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-- 61

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
            ++      + L +A      +IV +LL++  DIN  + +G TPL  A+  N ++    L
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 380 VNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTP 427
           +  G DL+   +   T + +A   G  ++   +  HI  +   +     P
Sbjct: 122 LARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  171 bits (435), Expect = 4e-49
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 7/172 (4%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGAD-INSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385
               +H    +  L+ +K  L KG + +N  ++ G TPL  A A   +E   +L+  G D
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 386 LSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFH 442
             +  +   +AL +AS  G  ++V  LL+  ++IN  D +G TPL          ++   
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN--HVKCVE 119

Query: 443 SIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHI-DINSENDLGKTP 493
           +++  GAD+  +   G T + LA   G   +   +  HI  +   N +   P
Sbjct: 120 ALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  169 bits (432), Expect = 9e-49
 Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 7/173 (4%)

Query: 391 GERTALHMASQFGNLEMVNYLLKH--ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEA 447
           G+  ++H  +  G L+ +   L+     +N  D+ G+TPL   S  G+  +E    ++E 
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGE--IETVRFLLEW 58

Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIF 506
           GAD      +  +AL LA   G   +V  L++  +DIN  +  G TP+ +A++ NH++  
Sbjct: 59  GADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCV 118

Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG-VNLQDNKGCTP 558
             LL  GAD+  +  S +T + +A      ++   + +HI  +   +     P
Sbjct: 119 EALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  155 bits (394), Expect = 1e-43
 Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 36/201 (17%)

Query: 458 GTTALHLACYFGNLAMVNYLVKH--IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
            + ++H     G L  +   ++     +N  ++ G TP+ +A     +E    LL+ GAD
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEVFNH 573
             +  K   + L +A      ++V  LL      +N+ D  G TPL  A+ GN ++    
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLER-DVDINIYDWNGGTPLLYAVRGNHVKCVEA 120

Query: 574 LINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEA 633
           L+   AD                              +  E D G TP+ +AV+ G  + 
Sbjct: 121 LLARGAD------------------------------LTTEADSGYTPMDLAVALGYRKV 150

Query: 634 VKFLLNTKNIDVNHKTKDGST 654
            + + N   + +       + 
Sbjct: 151 QQVIEN-HILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  151 bits (383), Expect = 3e-42
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 2/170 (1%)

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
              +H  + +G   D  +  + + +  +   +    T L +A+    ++ ++FLL+ GAD
Sbjct: 3   SLSIHQLAAQG-ELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKL 840
           P IL  +  S L  +   G  +IV  LLE + D N+    +G T L  A   N +  ++ 
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYD-WNGGTPLLYAVRGNHVKCVEA 120

Query: 841 LLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           LL   AD+  E   G      A       +   + +    + ++      
Sbjct: 121 LLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  148 bits (377), Expect = 2e-41
 Identities = 37/175 (21%), Positives = 65/175 (37%), Gaps = 6/175 (3%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
               +H   + G L+ +K  L   +  VN   + G T L +A     ++ V  LLE  AD
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 678 VNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI 736
            ++      + L  A       DI+ +L++   D+N+ +      TPL YA         
Sbjct: 62  PHILAKERESALSLASTGG-YTDIVGLLLERDVDINIYDW--NGGTPLLYAVRGN-HVKC 117

Query: 737 ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSP 791
              L+    AD+T    +  T ++ A       + + +          +L    P
Sbjct: 118 VEALLAR-GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  125 bits (316), Expect = 3e-33
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 2/137 (1%)

Query: 755 NRTALNFAAFGNNLDLLKFLLKAGAD-PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
           +  +++  A    LD LK  L+ G +  +  D +  +PL+ +   G  E V  LLE+ AD
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
            ++   K   +AL  A+     DI+ LLL+ + DIN  D  G      A +  +   V  
Sbjct: 62  PHILA-KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEA 120

Query: 874 LLDAGSNIEKATKYRMT 890
           LL  G+++        T
Sbjct: 121 LLARGADLTTEADSGYT 137

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  124 bits (315), Expect = 5e-33
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 18/152 (11%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G+  L WA    + +  + L++ G   +++ K           E ++ L  A      ++
Sbjct: 36  GFTPLIWASAFGEIETVRFLLEWGADPHILAK-----------ERESALSLASTGGYTDI 84

Query: 274 VKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           V LLLE+  +   I        T L  A     V  V+ L   GA+  +  +  +G TP+
Sbjct: 85  VGLLLERDVD---INIYDWNGGTPLLYAVRGNHVKCVEALLARGAD--LTTEADSGYTPM 139

Query: 332 HIACRRKCLEIVKILLDKGADINSGNDDGCTP 363
            +A      ++ +++ +    +   N     P
Sbjct: 140 DLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  182 bits (465), Expect = 2e-52
 Identities = 47/230 (20%), Positives = 78/230 (33%), Gaps = 15/230 (6%)

Query: 274 VKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           ++ +L K  +P    ++R      L  AA+   +++V+       +   +  N  G+T L
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND--PSQPNEEGITAL 58

Query: 332 HIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG 391
           H A       IV  L+  GA++NS +  G TPL CA + N   +   LV HG  +     
Sbjct: 59  HNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTL 118

Query: 392 E--RTALHMASQF--GNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSII 445
               TA      +  G  +   YL     ++   +      L   S +    L       
Sbjct: 119 SDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREG-- 176

Query: 446 EAGADIKAKLMDGTTALHLACYFGNLAMV--NYLVKHIDINSENDLGKTP 493
                +  +     T    A   G    V  NY      +  +    K  
Sbjct: 177 -ESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKVKHH 225

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  144 bits (366), Expect = 3e-39
 Identities = 36/201 (17%), Positives = 64/201 (31%), Gaps = 10/201 (4%)

Query: 444 IIEAGADIKAK---LMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIK 499
           ++      +      ++    L  A   G L +V   VK   D +  N+ G T ++ AI 
Sbjct: 4   VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63

Query: 500 NNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNK-GCT 557
             +  I + L+  GA+V       +T LH A       +   L+ H   +       G T
Sbjct: 64  GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGAT 123

Query: 558 PLHCAIVG--NQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAMKYFDVNI 613
                        +   +L +    + +  +     L    A    ++     +   V  
Sbjct: 124 AFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLR 183

Query: 614 ENDIGETPLHVAVSHGCLEAV 634
            +   ET    A  HG    V
Sbjct: 184 RDGPEETDWWWAALHGQEGYV 204

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  138 bits (349), Expect = 5e-37
 Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 6/193 (3%)

Query: 701 IKMLVKYGADVNLTNEACYY-MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTAL 759
           ++ +++          A    +  L  A+  G+  ++ +  V+E   D +  N    TAL
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGEL-EVVQQAVKE-MNDPSQPNEEGITAL 58

Query: 760 NFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTI 819
           + A  G N  ++ FL+ AGA+ +  D    +PL  +       I   L+++ A     T+
Sbjct: 59  HNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTL 118

Query: 820 KHGSTALHTAAFH--NQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDA 877
             G+TA      +     D    L      +   +     A       +  D ++F    
Sbjct: 119 SDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSA-EFGDELSFREGE 177

Query: 878 GSNIEKATKYRMT 890
              + +      T
Sbjct: 178 SVTVLRRDGPEET 190

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  137 bits (348), Expect = 6e-37
 Identities = 37/223 (16%), Positives = 68/223 (30%), Gaps = 25/223 (11%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
               L  A    + ++ +  V +    +  ++           E  T LH+AI  ++  +
Sbjct: 21  PLVLLLDAALTGELEVVQQAVKEMNDPSQPNE-----------EGITALHNAICGANYSI 69

Query: 274 VKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVA-GLTP 330
           V  L+  GAN   +    +   T LH AA      I   L  +GA   +    ++ G T 
Sbjct: 70  VDFLITAGAN---VNSPDSHGWTPLHCAASCNDTVICMALVQHGAA--IFATTLSDGATA 124

Query: 331 LHIACRRKC--LEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV 388
                  +    +    L D    +   N      L+   +    +  ++       +  
Sbjct: 125 FEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDY-SAEFGDELSFREGESVTVLR 183

Query: 389 PEGE-RTALHMASQFGNLEMV--NYLLKHININHQDKDGWTPL 428
            +G   T    A+  G    V  NY      +  Q        
Sbjct: 184 RDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKVKHHH 226

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  131 bits (331), Expect = 1e-34
 Identities = 50/257 (19%), Positives = 75/257 (29%), Gaps = 45/257 (17%)

Query: 610 DVNIENDI---GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLD 666
                          L  A   G LE V+  +  +  D +   ++G TAL  A       
Sbjct: 10  SPRKARRARLNPLVLLLDAALTGELEVVQQAVK-EMNDPSQPNEEGITALHNAICGANYS 68

Query: 667 LVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLH 725
           +V+ L+ A A+VN  D   +TPL+ A   +    I   LV++GA +  T  +    T   
Sbjct: 69  IVDFLITAGANVNSPDSHGWTPLHCAASCN-DTVICMALVQHGAAIFATTLS-DGATAFE 126

Query: 726 YAS-YRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDIL 784
               YR    D A +L +     + L N     AL   +     D L F           
Sbjct: 127 KCDPYREGYADCATYLADV-EQSMGLMNSGAVYALWDYSAE-FGDELSFREGESVTVLRR 184

Query: 785 DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDII-KLLLK 843
           D                                      T    AA H Q   + +    
Sbjct: 185 D----------------------------------GPEETDWWWAALHGQEGYVPRNYFG 210

Query: 844 YNADINAEDKYGKIAFH 860
               +  +    K   H
Sbjct: 211 LFPRVKPQRSKVKHHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  131 bits (331), Expect = 1e-34
 Identities = 37/211 (17%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 668 VEILLEANADVNLGDGT----YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTP 723
           +  +L                   L  A +    L++++  VK   D +  NE    +T 
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTG-ELEVVQQAVKEMNDPSQPNE--EGITA 57

Query: 724 LHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDI 783
           LH A        I  FL+    A++   + +  T L+ AA  N+  +   L++ GA    
Sbjct: 58  LHNAICGA-NYSIVDFLITAG-ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA 115

Query: 784 LDLKD-TSPLL--SSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKL 840
             L D  +        R+G  +    L +      L        AL   +     D +  
Sbjct: 116 TTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN-SGAVYALWDYSAEF-GDELSF 173

Query: 841 LLKYNADINAEDKYGKIAFHSACQAKNWDIV 871
               +  +   D   +  +  A        V
Sbjct: 174 REGESVTVLRRDGPEETDWWWAALHGQEGYV 204

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  177 bits (450), Expect = 1e-50
 Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 6/225 (2%)

Query: 324 NVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG 383
            V+ +   ++A   K  E+ + +L   +     + D  T L  A +    E+  +L+  G
Sbjct: 4   CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG 63

Query: 384 CDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVF 441
             ++   +   + LH+A+  G  E+V  LL    ++N  +++G TPL  +   +   E+ 
Sbjct: 64  VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAAS-KNRHEIA 122

Query: 442 HSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKN 500
             ++E GA+  AK     TA+H A   GNL MV+ L+ +    N ++  G TP++ A   
Sbjct: 123 VMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDE 182

Query: 501 NHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
             +E    L+  GA + ++ K   T L VA     + ++   L+ 
Sbjct: 183 ERVEEAKFLVTQGASIYIENKEEKTPLQVAKG--GLGLILKRLAE 225

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  176 bits (449), Expect = 2e-50
 Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 8/228 (3%)

Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           N    ++A   +  ++ + +    +       +    T LH AC     EIV+ LL  G 
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSL--ATRTDQDSRTALHWACSAGHTEIVEFLLQLGV 64

Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNY 410
            +N  +D G +PL  A +    E+   L+  G  ++       T LH A+     E+   
Sbjct: 65  PVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVM 124

Query: 411 LLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFG 469
           LL+   N + +D    T +  +   + +L++ H ++   A    +  +G T LHLAC   
Sbjct: 125 LLEGGANPDAKDHYDATAMHRAAA-KGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEE 183

Query: 470 NLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
            +    +LV     I  EN   KTP+  A     L +    L  G + 
Sbjct: 184 RVEEAKFLVTQGASIYIENKEEKTPLQVA--KGGLGLILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  165 bits (419), Expect = 2e-46
 Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 9/233 (3%)

Query: 356 GNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL-SVPEGERTALHMASQFGNLEMVNYLLKH 414
           G          A +    E+   ++          +  RTALH A   G+ E+V +LL+ 
Sbjct: 3   GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQL 62

Query: 415 -ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLA 472
            + +N +D  GW+PL   +  G    E+  +++  GA + A   +G T LH A       
Sbjct: 63  GVPVNDKDDAGWSPLHIAASAG--XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHE 120

Query: 473 MVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVAC 531
           +   L++   + ++++    T ++ A    +L++ ++LL   A   ++     T LH+AC
Sbjct: 121 IAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLAC 180

Query: 532 EFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITM 583
           +   +E   FL++    + +++ +  TPL  A     L +    +    + +M
Sbjct: 181 DEERVEEAKFLVTQGASIYIENKEEKTPLQVA--KGGLGLILKRLAEGEEASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  161 bits (409), Expect = 4e-45
 Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 9/229 (3%)

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGV 548
                  A      E+   +L   +      + + T LH AC     E+V FLL   + V
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 549 NLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAM 606
           N +D+ G +PLH A      E+   L+   A +     +  +PLH A +    ++    +
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL 126

Query: 607 KY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRL 665
           +   + + ++    T +H A + G L+ V  LL       N +  +G+T L  AC ++R+
Sbjct: 127 EGGANPDAKDHYDATAMHRAAAKGNLKMVHILL-FYKASTNIQDTEGNTPLHLACDEERV 185

Query: 666 DLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNL 713
           +  + L+   A + + +    TPL  A      L +I   +  G + ++
Sbjct: 186 EEAKFLVTQGASIYIENKEEKTPLQVA---KGGLGLILKRLAEGEEASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  152 bits (385), Expect = 6e-42
 Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 41/264 (15%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
                ++A S    E  + +L           +D  TAL +AC     ++VE LL+    
Sbjct: 7   NIMICNLAYSGKLDELKERILA-DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 65

Query: 678 VNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIA 737
           VN  D                         G             +PLH A+  G  ++I 
Sbjct: 66  VNDKD-----------------------DAG------------WSPLHIAASAG-XDEIV 89

Query: 738 RFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCR 797
           + L+ +  A +   N N  T L++AA  N  ++   LL+ GA+PD  D  D + +  +  
Sbjct: 90  KALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAA 148

Query: 798 QGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKI 857
           +G  ++V  LL Y A TN++    G+T LH A    +++  K L+   A I  E+K  K 
Sbjct: 149 KGNLKMVHILLFYKASTNIQD-TEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKT 207

Query: 858 AFHSACQAKNWDIVTFLLDAGSNI 881
               A       ++   L  G   
Sbjct: 208 PLQVAKGGL--GLILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  146 bits (369), Expect = 9e-40
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 19/240 (7%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
                  A   K  ++ + ++         D+           ++ T LH A      E+
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQ-----------DSRTALHWACSAGHTEI 55

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           V+ LL+ G      + +   + LH+AA     +IVK L   GA   VN  N  G TPLH 
Sbjct: 56  VEFLLQLGVPVNDKDDA-GWSPLHIAASAGXDEIVKALLVKGAH--VNAVNQNGCTPLHY 112

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE- 392
           A  +   EI  +LL+ GA+ ++ +    T +  A A+  L++ + L+ +    ++ + E 
Sbjct: 113 AASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEG 172

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
            T LH+A     +E   +L+    +I  ++K+  TPL  +   +  L +    +  G + 
Sbjct: 173 NTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA---KGGLGLILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  140 bits (353), Expect = 1e-37
 Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 39/263 (14%)

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIE 614
                + A  G   E+   ++   +                                   
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLA------------------------------TRT 36

Query: 615 NDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
           +    T LH A S G  E V+FLL    + VN K   G + L  A      ++V+ LL  
Sbjct: 37  DQDSRTALHWACSAGHTEIVEFLLQ-LGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95

Query: 675 NADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDC 733
            A VN  +    TPL+ A  K+   +I  ML++ GA+ +  +   Y  T +H A+ +G  
Sbjct: 96  GAHVNAVNQNGCTPLHYAASKN-RHEIAVMLLEGGANPDAKDH--YDATAMHRAAAKG-N 151

Query: 734 NDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLL 793
             +   L+    A   +++    T L+ A     ++  KFL+  GA   I + ++ +PL 
Sbjct: 152 LKMVHILLFY-KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQ 210

Query: 794 SSCRQGLYEIVDTLLEYNADTNL 816
            +  +G   ++   L    + ++
Sbjct: 211 VA--KGGLGLILKRLAEGEEASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  136 bits (343), Expect = 3e-36
 Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 6/219 (2%)

Query: 686 TPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN 745
                A       ++ + ++   +    T++     T LH+A   G   +I  FL++   
Sbjct: 9   MICNLAYSGK-LDELKERILADKSLATRTDQ--DSRTALHWACSAG-HTEIVEFLLQ-LG 63

Query: 746 ADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVD 805
             +  ++    + L+ AA     +++K LL  GA  + ++    +PL  +  +  +EI  
Sbjct: 64  VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAV 123

Query: 806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQA 865
            LLE  A+ + +   + +TA+H AA    L ++ +LL Y A  N +D  G    H AC  
Sbjct: 124 MLLEGGANPDAKD-HYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDE 182

Query: 866 KNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKL 904
           +  +   FL+  G++I    K   T          +   
Sbjct: 183 ERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILK 221

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  108 bits (270), Expect = 1e-26
 Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 1/139 (0%)

Query: 752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYN 811
             +N    N A  G   +L + +L   +     D    + L  +C  G  EIV+ LL+  
Sbjct: 4   CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG 63

Query: 812 ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV 871
              N +    G + LH AA     +I+K LL   A +NA ++ G    H A      +I 
Sbjct: 64  VPVNDKD-DAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIA 122

Query: 872 TFLLDAGSNIEKATKYRMT 890
             LL+ G+N +    Y  T
Sbjct: 123 VMLLEGGANPDAKDHYDAT 141

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 82.2 bits (203), Expect = 1e-17
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 16/143 (11%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI 271
             G   L +A  + + +IA +L++ G   +  D               T +H A    ++
Sbjct: 104 QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH-----------YDATAMHRAAAKGNL 152

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           ++V +LL   A+    +     T LH+A   E V+  K L   GA   + ++N    TPL
Sbjct: 153 KMVHILLFYKASTNIQDTE-GNTPLHLACDEERVEEAKFLVTQGAS--IYIENKEEKTPL 209

Query: 332 HIACRRKCLEIVKILLDKGADIN 354
            +A       ++   L +G + +
Sbjct: 210 QVAKGGL--GLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 52.6 bits (126), Expect = 2e-07
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI 271
                A+  A  +    +  +L+      N+ D            E +TPLH A     +
Sbjct: 137 HYDATAMHRAAAKGNLKMVHILLFYKASTNIQDT-----------EGNTPLHLACDEERV 185

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNV 322
           E  K L+ +GA+ + IE    +T L VA     + ++      G E   ++
Sbjct: 186 EEAKFLVTQGAS-IYIENKEEKTPLQVAK--GGLGLILKRLAEGEE--ASM 231

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  177 bits (452), Expect = 1e-50
 Identities = 48/245 (19%), Positives = 84/245 (34%), Gaps = 33/245 (13%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
           G   L    R    +     +  G  +   N      L  +  +   ++   ++    D 
Sbjct: 5   GQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP 63

Query: 387 SVPEGE-RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHS 443
           S+P  E  TALH A   G+ E+V +L++  +N+N  D DGWTPL C +     +++V   
Sbjct: 64  SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN--NVQVCKF 121

Query: 444 IIEAGADIKAK---LMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIK 499
           ++E+GA + A     M            G      +L      +   N      ++    
Sbjct: 122 LVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEP 181

Query: 500 NNHLEIFNLLLKLGADVAVKMKSNF--TCLHVACEFASIEMVSFLLSHIGVNLQDNKGCT 557
            N  E   L +K G  + +  + +        A                   L D +G  
Sbjct: 182 QNDDE---LPMKEGDCMTIIHREDEDEIEWWWA------------------RLNDKEGYV 220

Query: 558 PLHCA 562
           P +  
Sbjct: 221 PRNLL 225

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  173 bits (442), Expect = 3e-49
 Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 15/226 (6%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             L      +  +     +  G              L  +++    D+V+ +     +  
Sbjct: 7   VSLPPGKRTNLRKTGSERIAHGMR--VKFNPLPLALLLDSSLEGEFDLVQRIIYEVDD-- 62

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
            ++ N  G+T LH A      EIVK L+  G ++N+ + DG TPL CA + N ++V  +L
Sbjct: 63  PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122

Query: 380 VNHGCDLSV----PEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIK 433
           V  G  +                  + G  +   +L      +   +K     L     +
Sbjct: 123 VESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQ 182

Query: 434 GQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMV--NYL 477
               L +          I  +  +       A        V  N L
Sbjct: 183 NDDELPMKEG---DCMTIIHREDEDEIEWWWARLNDKEGYVPRNLL 225

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  152 bits (387), Expect = 5e-42
 Identities = 48/280 (17%), Positives = 79/280 (28%), Gaps = 71/280 (25%)

Query: 421 DKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK 479
           +  G   L           +     I  G  +K         L  +   G   +V  ++ 
Sbjct: 2   EITGQVSLPPGKRTNL--RKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIY 58

Query: 480 H-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEM 538
              D +  ND G T ++ A+   H EI   L++ G +                       
Sbjct: 59  EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN----------------------- 95

Query: 539 VSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGN 598
                    VN  D+ G TPLHCA   N ++V   L+ S A +             A   
Sbjct: 96  ---------VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF------------AMTY 134

Query: 599 MDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFF 658
            DM T                      +  G  +  +FL       +    K    AL+ 
Sbjct: 135 SDMQTA---------------ADKCEEMEEGYTQCSQFLYG-VQEKMGIMNKGVIYALWD 178

Query: 659 ACYDKRLDLVEILLEANADVNL---GDGTYTPLYTALMKD 695
                     E+ ++    + +    D      + A + D
Sbjct: 179 YEPQNDD---ELPMKEGDCMTIIHREDEDEIEWWWARLND 215

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  148 bits (375), Expect = 3e-40
 Identities = 42/224 (18%), Positives = 74/224 (33%), Gaps = 17/224 (7%)

Query: 552 DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDS-PLHLACATGNMDMITYAMKY-F 609
           +  G   L      N  +  +  I     +         L  +   G  D++   +    
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVD 61

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           D ++ ND G T LH AV  G  E VKFL+    ++VN    DG T L  A     + + +
Sbjct: 62  DPSLPNDEGITALHNAVCAGHTEIVKFLVQ-FGVNVNAADSDGWTPLHCAASCNNVQVCK 120

Query: 670 ILLEANADVNLGD----GTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLH 725
            L+E+ A V         T       + +       + L      + + N+    +  L 
Sbjct: 121 FLVESGAAVFAMTYSDMQTAADKCEEMEEG-YTQCSQFLYGVQEKMGIMNKGV--IYALW 177

Query: 726 YASYRGDCNDIARFLVEECNADITL--RNFNNRTALNFAAFGNN 767
               + D       L  +    +T+  R   +     +A   + 
Sbjct: 178 DYEPQNDDE-----LPMKEGDCMTIIHREDEDEIEWWWARLNDK 216

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  139 bits (352), Expect = 3e-37
 Identities = 33/202 (16%), Positives = 64/202 (31%), Gaps = 10/202 (4%)

Query: 682 DGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLV 741
            G    L      +         + +G  V         +  L  +S  G+  D+ + ++
Sbjct: 4   TG-QVSLPPGKRTN-LRKTGSERIAHGMRVKFNP---LPLALLLDSSLEGEF-DLVQRII 57

Query: 742 EECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLY 801
            E   D +L N    TAL+ A    + +++KFL++ G + +  D    +PL  +      
Sbjct: 58  YE-VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV 116

Query: 802 EIVDTLLEYNADTNLRTIK--HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAF 859
           ++   L+E  A     T      +               + L      +   +K    A 
Sbjct: 117 QVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYAL 176

Query: 860 HSACQAKNWDIVTFLLDAGSNI 881
                 +N D +         I
Sbjct: 177 WDYE-PQNDDELPMKEGDCMTI 197

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  131 bits (332), Expect = 1e-34
 Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 35/220 (15%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
               L  +  E + D+ + ++ +    +L +            E  T LH+A+     E+
Sbjct: 37  PLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-----------EGITALHNAVCAGHTEI 85

Query: 274 VKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAEK-SVNVQNVAGLTP 330
           VK L++ G N   +  + +   T LH AA   +V + K L + GA   ++   ++     
Sbjct: 86  VKFLVQFGVN---VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAAD 142

Query: 331 LHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPE 390
                     +  + L      +   N      L+    QN  E+    +  G  +    
Sbjct: 143 KCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDEL---PMKEGDCM---- 195

Query: 391 GERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTC 430
              T +H      + + + +    +N    DK+G+ P   
Sbjct: 196 ---TIIHR----EDEDEIEWWWARLN----DKEGYVPRNL 224

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  115 bits (291), Expect = 4e-29
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 2/133 (1%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
             + +L      N        +  G       L     LL S  +G +++V  ++    D
Sbjct: 4   TGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLA-LLLDSSLEGEFDLVQRIIYEVDD 62

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
            +L     G TALH A      +I+K L+++  ++NA D  G    H A    N  +  F
Sbjct: 63  PSLPN-DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKF 121

Query: 874 LLDAGSNIEKATK 886
           L+++G+ +   T 
Sbjct: 122 LVESGAAVFAMTY 134

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 94.6 bits (236), Expect = 8e-22
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 2/100 (2%)

Query: 791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINA 850
            L    R  L +     + +               L  ++   + D+++ ++    D + 
Sbjct: 8   SLPPGKRTNLRKTGSERIAHGMRVKFN--PLPLALLLDSSLEGEFDLVQRIIYEVDDPSL 65

Query: 851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
            +  G  A H+A  A + +IV FL+  G N+  A     T
Sbjct: 66  PNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWT 105

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 6/71 (8%), Positives = 18/71 (25%), Gaps = 1/71 (1%)

Query: 820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879
             G  +L      N        + +   +   +         +     +D+V  ++    
Sbjct: 3   ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVD 61

Query: 880 NIEKATKYRMT 890
           +        +T
Sbjct: 62  DPSLPNDEGIT 72

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  163 bits (416), Expect = 7e-46
 Identities = 55/273 (20%), Positives = 92/273 (33%), Gaps = 70/273 (25%)

Query: 327 GLTPLHIACRRKCLEIV-KILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385
             +PL +A +   ++ + K+L  +G +++     G T L  A   + LE    L+    +
Sbjct: 3   WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPE 62

Query: 386 LSVPEGE------RTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLE 439
           L            +TALH+A    N+ +V  LL                           
Sbjct: 63  LVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR------------------------- 97

Query: 440 VFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIK 499
                   GA + A+                       V H   ++    G+ P+ FA  
Sbjct: 98  --------GASVSAR-------------------ATGSVFHYRPHNLIYYGEHPLSFAAC 130

Query: 500 NNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVS----FLLSH-------IGV 548
               EI  LL++ GAD+  +     T LH+     +          LLS+          
Sbjct: 131 VGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLE 190

Query: 549 NLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
            + +N+G TP   A V   + +F HL+     I
Sbjct: 191 LVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  108 bits (273), Expect = 8e-27
 Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 43/182 (23%)

Query: 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
           +PL  A+   D   +++ L  E   ++  R     TAL+ AA  +NL+    L++A  + 
Sbjct: 5   SPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPEL 63

Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
                                         ++        G TALH A  +  +++++ L
Sbjct: 64  VFEP------------------------MTSELY-----EGQTALHIAVINQNVNLVRAL 94

Query: 842 LKYNADINAEDK-------------YGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYR 888
           L   A ++A                YG+     A    + +IV  L++ G++I       
Sbjct: 95  LARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLG 154

Query: 889 MT 890
            T
Sbjct: 155 NT 156

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 66.1 bits (162), Expect = 3e-12
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 822 GSTALHTAAFHNQLDII-KLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
             + L  AA  N +  + KLL     +++     G+ A H A    N +    L++A   
Sbjct: 3   WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPE 62

Query: 881 IEKATK 886
           +     
Sbjct: 63  LVFEPM 68

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  174 bits (444), Expect = 1e-49
 Identities = 43/280 (15%), Positives = 87/280 (31%), Gaps = 50/280 (17%)

Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
           +     G     I  +              AD+     +                     
Sbjct: 9   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADV---VSEY-------------------- 45

Query: 381 NHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTC-SIKGQASLE 439
                        T    A++  + + ++ LL+  +++  D++G T L   +  G  S +
Sbjct: 46  ------------ETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLG--SDK 91

Query: 440 VFHSIIEAGADIKAK-LMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFA 497
               + EAGAD+  + +  G TALH+A  +    +V  LV+   DI  E++ G T +  A
Sbjct: 92  CVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELA 151

Query: 498 IKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCT 557
            +          ++ G  + ++       +     F   E+         +  +  KG  
Sbjct: 152 REILKTTPKGNPMQFGRRIGLE---KVINVLEGQVFEYAEVDE-------IVEKRGKGKD 201

Query: 558 PLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATG 597
             +     +  +         A+      +  L  A A  
Sbjct: 202 VEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAES 241

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  167 bits (425), Expect = 5e-47
 Identities = 37/255 (14%), Positives = 87/255 (34%), Gaps = 21/255 (8%)

Query: 415 ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAM 473
           I  +    +G          G      +       AD+ ++     T    A    +   
Sbjct: 6   IIGSRTAGEGAMEYLIEWKDGH--SPSWVPSSYIAADVVSE---YETPWWTAARKADEQA 60

Query: 474 VNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVK-MKSNFTCLHVACE 532
           ++ L++  D+++ ++ G+T + F       +   LL + GAD+  + M+   T LH+A  
Sbjct: 61  LSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120

Query: 533 FASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPL 590
           +   E+V  L+   G  + ++D +G T L  A    +     + +     I + +    +
Sbjct: 121 YVRPEVVEALVEL-GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGL-EKVINV 178

Query: 591 HLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTK 650
                    ++        ++  +   G+   ++       +           +     K
Sbjct: 179 LEGQVFEYAEVD-------EIVEKRGKGKDVEYLVRWKDGGDCEWVKGV-HVAEDVA--K 228

Query: 651 DGSTALFFACYDKRL 665
           D    L +A  +  +
Sbjct: 229 DYEDGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  161 bits (409), Expect = 8e-45
 Identities = 49/255 (19%), Positives = 93/255 (36%), Gaps = 31/255 (12%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI 271
            +G        ++  +             ++V +             +TP  +A   +D 
Sbjct: 13  GEGAMEYLIEWKDGHSPSWVPSSYIAA--DVVSEY------------ETPWWTAARKADE 58

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNV-AGLTP 330
           + +  LLE   +  A++++  RTAL   A + S   V+LL + GA+  ++ +++  GLT 
Sbjct: 59  QALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGAD--LDHRDMRGGLTA 114

Query: 331 LHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPE 390
           LH+A      E+V+ L++ GADI   ++ G T L  A            +  G  +    
Sbjct: 115 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIG--L 172

Query: 391 GERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGAD 450
            +   +     F   E+   + K          G       ++ +   +         A+
Sbjct: 173 EKVINVLEGQVFEYAEVDEIVEK-------RGKGKDVEYL-VRWKDGGDCEWVKGVHVAE 224

Query: 451 IKAKLMDGTTALHLA 465
             AK  D    L  A
Sbjct: 225 DVAK--DYEDGLEYA 237

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  158 bits (403), Expect = 4e-44
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 24/254 (9%)

Query: 612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
           +     G     +    G   +          DV     +  T  + A        +  L
Sbjct: 9   SRTAGEGAMEYLIEWKDGHSPSWVPSSY-IAADVV---SEYETPWWTAARKADEQALSQL 64

Query: 672 LEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYR 730
           LE + DV+  D    T L        S   +++L + GAD++  +     +T LH A+  
Sbjct: 65  LE-DRDVDAVDENGRTALLFVAGLG-SDKCVRLLAEAGADLDHRDMR-GGLTALHMAAGY 121

Query: 731 GDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTS 790
               ++   LVE   ADI + +    TAL  A            ++ G     + L+   
Sbjct: 122 V-RPEVVEALVEL-GADIEVEDERGLTALELAREILKTTPKGNPMQFGRR---IGLEKVI 176

Query: 791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINA 850
            +L        E+ + + +            G    +   + +  D   +   + A+  A
Sbjct: 177 NVLEGQVFEYAEVDEIVEKRG---------KGKDVEYLVRWKDGGDCEWVKGVHVAEDVA 227

Query: 851 EDKYGKIAFHSACQ 864
           +D   +     A  
Sbjct: 228 KDY--EDGLEYAVA 239

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  142 bits (360), Expect = 3e-38
 Identities = 40/243 (16%), Positives = 78/243 (32%), Gaps = 21/243 (8%)

Query: 640 TKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLD 699
              I  +    +G+        D             ADV   +   TP +TA  K     
Sbjct: 3   VNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV-SEY-ETPWWTAARKA-DEQ 59

Query: 700 IIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNN-RTA 758
            +  L++   DV+  +E     T L + +  G  +   R L E   AD+  R+     TA
Sbjct: 60  ALSQLLE-DRDVDAVDE--NGRTALLFVAGLG-SDKCVRLLAEA-GADLDHRDMRGGLTA 114

Query: 759 LNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRT 818
           L+ AA     ++++ L++ GAD ++ D +  + L  +            +++     L  
Sbjct: 115 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEK 174

Query: 819 IKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878
           +      +         ++         +I  +   GK   +        D         
Sbjct: 175 V----INVLEGQVFEYAEV--------DEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHV 222

Query: 879 SNI 881
           +  
Sbjct: 223 AED 225

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 44.5 bits (106), Expect = 8e-05
 Identities = 14/98 (14%), Positives = 21/98 (21%), Gaps = 14/98 (14%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSR-------RIIETD----TPL 262
           G  AL  A +  KT      +  G  + L      L            I+E         
Sbjct: 144 GLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVE 203

Query: 263 HSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAA 300
           +        +   +     A             L  A 
Sbjct: 204 YLVRWKDGGDCEWVKGVHVAE---DVAKDYEDGLEYAV 238

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  173 bits (442), Expect = 2e-49
 Identities = 37/238 (15%), Positives = 66/238 (27%), Gaps = 33/238 (13%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
           G   +  A           L  +  DI    D   T  +   ++    +           
Sbjct: 12  GQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQA- 70

Query: 387 SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHS- 443
              E     LH A++ GNL  +   L + + +N  DK G T L      G    ++    
Sbjct: 71  ---ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGG--HKDIVEML 125

Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNH 502
             +   ++  +   G TALH A + G   +V  L+      +  N   K     A     
Sbjct: 126 FTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC 185

Query: 503 LEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLH 560
             +        A   +    ++                        + +D+      H
Sbjct: 186 ASLLKKKQGTDAVRTLSNAEDYL-----------------------DDEDSDLEHHHH 220

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  173 bits (440), Expect = 3e-49
 Identities = 37/249 (14%), Positives = 73/249 (29%), Gaps = 46/249 (18%)

Query: 259 DTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK 318
              +  A+   +      L  +  + + I    + T            ++   +      
Sbjct: 13  QVKVFRALYTFEPRTPDELYIEEGDIIYITD-MSDTNWWKGTSKGRTGLIPSNY------ 65

Query: 319 SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNY 378
            V  Q  +   PLH A +R  L  ++  LD    +N  +  G T L              
Sbjct: 66  -VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTAL-------------- 110

Query: 379 LVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH--ININHQDKDGWTPL-TCSIKGQ 435
                             + A   G+ ++V  L     I +N Q+K G T L   + KG 
Sbjct: 111 ------------------YWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG- 151

Query: 436 ASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPI 494
              ++   ++  GA    + ++   A  +A      +++             N       
Sbjct: 152 -YADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDD 210

Query: 495 YFAIKNNHL 503
             +   +H 
Sbjct: 211 EDSDLEHHH 219

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  164 bits (418), Expect = 3e-46
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 11/214 (5%)

Query: 354 NSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL-SVPEGERTALHMASQFGNLEMVNYLL 412
                 G   +F A+        + L     D+  + +   T     +  G   ++    
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI---- 61

Query: 413 KHININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNL 471
               +  Q +    PL   + +G  +L      ++    +      G+TAL+ AC+ G+ 
Sbjct: 62  PSNYVAEQAESIDNPLHEAAKRG--NLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHK 119

Query: 472 AMVNYLVKH--IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHV 529
            +V  L     I++N +N LG T ++ A    + +I  LLL  GA   ++         +
Sbjct: 120 DIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDM 179

Query: 530 ACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCA 562
           A   A   ++           L + +       +
Sbjct: 180 ATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDS 213

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  164 bits (418), Expect = 3e-46
 Identities = 33/242 (13%), Positives = 61/242 (25%), Gaps = 40/242 (16%)

Query: 418 NHQDKDGWTPL-TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNY 476
               K G   +       +        +     DI        T        G       
Sbjct: 6   PKPVKPGQVKVFRALYTFE--PRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTG---- 59

Query: 477 LVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASI 536
           L+    +  + +    P++ A K  +L      L     V    K+  T L+ AC     
Sbjct: 60  LIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHK 119

Query: 537 EMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLAC 594
           ++V  L +     +N Q+  G T LH A      ++   L+   A               
Sbjct: 120 DIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGART------------- 166

Query: 595 ATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGST 654
                            ++ N   +    +A +  C   +K      +        +   
Sbjct: 167 -----------------DLRNIEKKLAFDMATNAACASLLKKKQG-TDAVRTLSNAEDYL 208

Query: 655 AL 656
             
Sbjct: 209 DD 210

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  163 bits (414), Expect = 8e-46
 Identities = 42/243 (17%), Positives = 71/243 (29%), Gaps = 38/243 (15%)

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVN 549
           G+  ++ A+        + L     D+      + T            ++        V 
Sbjct: 12  GQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIP----SNYVA 67

Query: 550 LQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYF 609
            Q      PLH A     L      +++                                
Sbjct: 68  EQAESIDNPLHEAAKRGNLSWLRECLDNRVG----------------------------- 98

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
            VN  +  G T L+ A   G  + V+ L    NI++N + K G TAL  A +    D+V+
Sbjct: 99  -VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQ 157

Query: 670 ILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYAS 728
           +LL   A  +L +         A        ++K      A   L+N   Y       + 
Sbjct: 158 LLLAKGARTDLRNIEKKLAFDMATNAA-CASLLKKKQGTDAVRTLSNAEDY--LDDEDSD 214

Query: 729 YRG 731
              
Sbjct: 215 LEH 217

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  154 bits (392), Expect = 8e-43
 Identities = 38/219 (17%), Positives = 77/219 (35%), Gaps = 10/219 (4%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
           G+  +  A+          L   +  D+ + T    T  +      R  L+     A   
Sbjct: 12  GQVKVFRALYTFEPRTPDELYI-EEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQA 70

Query: 678 VNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIA 737
            +  D    PL+ A  +  +L  ++  +     VN  ++     T L++A + G   DI 
Sbjct: 71  ES-ID---NPLHEAAKRG-NLSWLRECLDNRVGVNGLDK--AGSTALYWACHGG-HKDIV 122

Query: 738 RFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCR 797
             L  + N ++  +N    TAL+ AA+    D+++ LL  GA  D+ +++       +  
Sbjct: 123 EMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATN 182

Query: 798 QGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLD 836
                ++      +A   L            +   +   
Sbjct: 183 AACASLLKKKQGTDAVRTLSN-AEDYLDDEDSDLEHHHH 220

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  150 bits (382), Expect = 1e-41
 Identities = 45/218 (20%), Positives = 78/218 (35%), Gaps = 12/218 (5%)

Query: 685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEEC 744
              ++ AL           L     D+    +     T     + +G      R  +   
Sbjct: 13  QVKVFRALYTF-EPRTPDELYIEEGDIIYITD--MSDTNWWKGTSKG------RTGLIPS 63

Query: 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIV 804
              +  +  +    L+ AA   NL  L+  L      + LD   ++ L  +C  G  +IV
Sbjct: 64  -NYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIV 122

Query: 805 DTLL-EYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSAC 863
           + L  + N + N +  K G TALH AA+    DI++LLL   A  +  +   K+AF  A 
Sbjct: 123 EMLFTQPNIELNQQN-KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMAT 181

Query: 864 QAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHV 901
            A    ++       +    +       +    +E H 
Sbjct: 182 NAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHHH 219

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  147 bits (374), Expect = 2e-40
 Identities = 39/221 (17%), Positives = 71/221 (32%), Gaps = 13/221 (5%)

Query: 646 NHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKML 704
               K G   +F A Y       + L     D+        T  +    K       +  
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKG------RTG 59

Query: 705 VKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF 764
           +     V    E      PLH A+ RG      R  ++     +   +    TAL +A  
Sbjct: 60  LIPSNYVAEQAE--SIDNPLHEAAKRG-NLSWLRECLDN-RVGVNGLDKAGSTALYWACH 115

Query: 765 GNNLDLLKFLL-KAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGS 823
           G + D+++ L  +   + +  +    + L ++  +G  +IV  LL   A T+LR      
Sbjct: 116 GGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRN-IEKK 174

Query: 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQ 864
            A   A       ++K     +A     +    +    +  
Sbjct: 175 LAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDL 215

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  145 bits (368), Expect = 1e-39
 Identities = 40/211 (18%), Positives = 68/211 (32%), Gaps = 22/211 (10%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGV--PLNYSRRIIETD------------ 259
           G   +  AL   +      L  +   +  +                T             
Sbjct: 12  GQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAE 71

Query: 260 ---TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFD-YG 315
               PLH A    ++  ++  L+       ++K+   TAL+ A      DIV++LF    
Sbjct: 72  SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKA-GSTALYWACHGGHKDIVEMLFTQPN 130

Query: 316 AEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
            E  +N QN  G T LH A  +   +IV++LL KGA  +  N +       A    C  +
Sbjct: 131 IE--LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASL 188

Query: 376 FNYLVNHGCDLSVPEGE-RTALHMASQFGNL 405
                      ++   E       +    + 
Sbjct: 189 LKKKQGTDAVRTLSNAEDYLDDEDSDLEHHH 219

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  103 bits (258), Expect = 7e-25
 Identities = 23/138 (16%), Positives = 40/138 (28%), Gaps = 7/138 (5%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
             +  +  A +         L     D   +     +       +G   ++ +       
Sbjct: 11  PGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQA 70

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
                 +     LH AA    L  ++  L     +N  DK G  A + AC   + DIV  
Sbjct: 71  ------ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEM 124

Query: 874 LLD-AGSNIEKATKYRMT 890
           L       + +  K   T
Sbjct: 125 LFTQPNIELNQQNKLGDT 142

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 60.0 bits (146), Expect = 4e-10
 Identities = 12/99 (12%), Positives = 20/99 (20%), Gaps = 28/99 (28%)

Query: 820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSAC---------------Q 864
           K G   +  A +  +      L     DI          +                   Q
Sbjct: 10  KPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQ 69

Query: 865 AKNW-------------DIVTFLLDAGSNIEKATKYRMT 890
           A++                +   LD    +    K   T
Sbjct: 70  AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGST 108

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  170 bits (434), Expect = 4e-49
 Identities = 31/199 (15%), Positives = 70/199 (35%), Gaps = 37/199 (18%)

Query: 326 AGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385
           A    +H    +  +  +   +++   IN  +++G TP                      
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTP---------------------- 39

Query: 386 LSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHS 443
                     L  A+  G + +V +LL++  +     K   + L+    KG    ++   
Sbjct: 40  ----------LMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG--YTDIVKM 87

Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNH 502
           +++ G D+     +G T L  A +  ++  V  L++   D   E D G   +  A+   +
Sbjct: 88  LLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY 147

Query: 503 LEIFNLLLKLGADVAVKMK 521
             +  ++      +   +K
Sbjct: 148 RSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  168 bits (428), Expect = 3e-48
 Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 9/168 (5%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAE 317
             +H      ++  +   +E+      I  +     T L  AA    + +V+ L   GA+
Sbjct: 5   LSVHQLAAQGEMLYLATRIEQENV---INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 318 KSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFN 377
               +      + L +AC +   +IVK+LLD G D+N  + +G TPL  A+  N ++   
Sbjct: 62  --PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVK 119

Query: 378 YLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKD 423
            L+  G D ++  +    ++ +A   G   +   +  H + +    K+
Sbjct: 120 MLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  156 bits (396), Expect = 6e-44
 Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 6/161 (3%)

Query: 393 RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGAD 450
             ++H  +  G +  +   ++    INH D++G+TPL   +  G   + V   +++ GAD
Sbjct: 4   SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHG--QIAVVEFLLQNGAD 61

Query: 451 IKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLL 509
            +       +AL LAC  G   +V  L+   +D+N  +  G TP+ +A+  NH++   +L
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121

Query: 510 LKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNL 550
           L+ GAD  ++  S +  + +A       +   + SH  + L
Sbjct: 122 LESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH-LLKL 161

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  155 bits (394), Expect = 9e-44
 Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 35/198 (17%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
             + ++H     G +  +   ++    IN  ++ G TP+ +A  +  + +   LL+ GAD
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEVFNH 573
             +  K   + L +AC     ++V  LL   G  VN  D  G TPL  A+ GN ++    
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDC-GVDVNEYDWNGGTPLLYAVHGNHVKCVKM 120

Query: 574 LINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEA 633
           L+ S AD                                IE D G   + +AV+ G    
Sbjct: 121 LLESGADP------------------------------TIETDSGYNSMDLAVALGYRSV 150

Query: 634 VKFLLNTKNIDVNHKTKD 651
            + + +   + +    K+
Sbjct: 151 QQVIES-HLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  152 bits (387), Expect = 8e-43
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 3/166 (1%)

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
              +H  + +G         +E     I   +    T L +AA    + +++FLL+ GAD
Sbjct: 4   SLSVHQLAAQG-EMLYLATRIE-QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKL 840
           P +L     S L  +C +G  +IV  LL+   D N     +G T L  A   N +  +K+
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYD-WNGGTPLLYAVHGNHVKCVKM 120

Query: 841 LLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886
           LL+  AD   E   G  +   A       +   +      + +  K
Sbjct: 121 LLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  149 bits (378), Expect = 1e-41
 Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 14/170 (8%)

Query: 217 ALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKL 276
           ++     + +       +++   +N  D+           E  TPL  A  +  I +V+ 
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTDE-----------EGFTPLMWAAAHGQIAVVEF 54

Query: 277 LLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR 336
           LL+ GA+P  + K R  +AL +A      DIVK+L D G +  VN  +  G TPL  A  
Sbjct: 55  LLQNGADPQLLGKGR-ESALSLACSKGYTDIVKMLLDCGVD--VNEYDWNGGTPLLYAVH 111

Query: 337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
              ++ VK+LL+ GAD     D G   +  A+A     V   + +H   L
Sbjct: 112 GNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  143 bits (363), Expect = 2e-39
 Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 40/204 (19%)

Query: 651 DGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGA 709
             S ++        +  +   +E    +N  D   +TPL  A      + +++ L++ GA
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHG-QIAVVEFLLQNGA 60

Query: 710 DVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLD 769
           D  L  +     + L  A  +G   DI + L+ +C  D+   ++N  T L +A  GN++ 
Sbjct: 61  DPQLLGK--GRESALSLACSKG-YTDIVKMLL-DCGVDVNEYDWNGGTPLLYAVHGNHVK 116

Query: 770 LLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTA 829
            +K LL++GADP I                                      G  ++  A
Sbjct: 117 CVKMLLESGADPTIET----------------------------------DSGYNSMDLA 142

Query: 830 AFHNQLDIIKLLLKYNADINAEDK 853
                  + +++  +   +    K
Sbjct: 143 VALGYRSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  142 bits (360), Expect = 3e-39
 Identities = 36/227 (15%), Positives = 69/227 (30%), Gaps = 65/227 (28%)

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVN 549
               ++       +      ++    +                                N
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQENVI--------------------------------N 30

Query: 550 LQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYF 609
             D +G TPL  A    Q+ V   L+ + AD                             
Sbjct: 31  HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP---------------------------- 62

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
              +     E+ L +A S G  + VK LL+   +DVN    +G T L +A +   +  V+
Sbjct: 63  --QLLGKGRESALSLACSKGYTDIVKMLLD-CGVDVNEYDWNGGTPLLYAVHGNHVKCVK 119

Query: 670 ILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTN 715
           +LLE+ AD  +   + Y  +  A+       + +++  +   +    
Sbjct: 120 MLLESGADPTIETDSGYNSMDLAVALG-YRSVQQVIESHLLKLLQNI 165

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  131 bits (333), Expect = 1e-35
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 1/137 (0%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
            N  +++  A    +  L   ++     +  D +  +PL+ +   G   +V+ LL+  AD
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
             L   K   +AL  A      DI+K+LL    D+N  D  G      A    +   V  
Sbjct: 62  PQLLG-KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKM 120

Query: 874 LLDAGSNIEKATKYRMT 890
           LL++G++    T     
Sbjct: 121 LLESGADPTIETDSGYN 137

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  115 bits (291), Expect = 7e-30
 Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 18/148 (12%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G+  L WA    +  + + L+  G    L+ K             ++ L  A      ++
Sbjct: 36  GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-----------GRESALSLACSKGYTDI 84

Query: 274 VKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           VK+LL+ G +   + +      T L  A     V  VK+L + GA+    ++  +G   +
Sbjct: 85  VKMLLDCGVD---VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD--PTIETDSGYNSM 139

Query: 332 HIACRRKCLEIVKILLDKGADINSGNDD 359
            +A       + +++      +     +
Sbjct: 140 DLAVALGYRSVQQVIESHLLKLLQNIKE 167

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  170 bits (433), Expect = 1e-48
 Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 14/197 (7%)

Query: 288 EKSRN-RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKIL 346
              +N      +          +   +   +   N ++    TPL +AC       +  L
Sbjct: 3   HMDKNGEIVEKIKD--------EKSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKL 54

Query: 347 LDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNL 405
           ++    +   + +G T L  A+  N L +   L++ G +++      +T L  +  FG  
Sbjct: 55  VENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYS 114

Query: 406 EMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALH 463
           EM  +LL+H  N+N ++ +G TPL   S  G    E+   ++E GADI A+ + G TA  
Sbjct: 115 EMSYFLLEHGANVNDRNLEGETPLIVASKYG--RSEIVKKLLELGADISARDLTGLTAEA 172

Query: 464 LACYFGNLAMVNYLVKH 480
            A  FG   ++    + 
Sbjct: 173 SARIFGRQEVIKIFTEV 189

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  164 bits (419), Expect = 9e-47
 Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 13/199 (6%)

Query: 350 GADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVN 409
           G+ ++    +G         ++  +  ++L N+          RT L +A   G    ++
Sbjct: 1   GSHMD---KNGEIVEKIKDEKSINQNLDFLRNYRD-----SYNRTPLMVACMLGMENAID 52

Query: 410 YLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACY 467
            L+++   +  +D +G T L          L +   ++  G+++  K   G T L  +  
Sbjct: 53  KLVENFDKLEDKDIEGSTALIWAVKNN--RLGIAEKLLSKGSNVNTKDFSGKTPLMWSII 110

Query: 468 FGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTC 526
           FG   M  +L++H  ++N  N  G+TP+  A K    EI   LL+LGAD++ +  +  T 
Sbjct: 111 FGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTA 170

Query: 527 LHVACEFASIEMVSFLLSH 545
              A  F   E++      
Sbjct: 171 EASARIFGRQEVIKIFTEV 189

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  162 bits (414), Expect = 5e-46
 Identities = 46/200 (23%), Positives = 76/200 (38%), Gaps = 17/200 (8%)

Query: 315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE 374
           G+    N     G     I   +   + +  L       N  +    TPL  A       
Sbjct: 1   GSHMDKN-----GEIVEKIKDEKSINQNLDFL------RNYRDSYNRTPLMVACMLGMEN 49

Query: 375 VFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-S 431
             + LV +   L        TAL  A +   L +   LL    N+N +D  G TPL    
Sbjct: 50  AIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI 109

Query: 432 IKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLG 490
           I G    E+ + ++E GA++  + ++G T L +A  +G   +V  L++   DI++ +  G
Sbjct: 110 IFG--YSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTG 167

Query: 491 KTPIYFAIKNNHLEIFNLLL 510
            T    A      E+  +  
Sbjct: 168 LTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  159 bits (404), Expect = 1e-44
 Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 12/187 (6%)

Query: 393 RTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADI 451
                +  +    + +++L      N++D    TPL    + G         ++E    +
Sbjct: 9   EIVEKIKDEKSINQNLDFL-----RNYRDSYNRTPLMVACMLG--MENAIDKLVENFDKL 61

Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
           + K ++G+TAL  A     L +   L+    ++N+++  GKTP+ ++I   + E+   LL
Sbjct: 62  EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL 121

Query: 511 KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQL 568
           + GA+V  +     T L VA ++   E+V  LL   G  ++ +D  G T    A +  + 
Sbjct: 122 EHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL-GADISARDLTGLTAEASARIFGRQ 180

Query: 569 EVFNHLI 575
           EV     
Sbjct: 181 EVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  154 bits (392), Expect = 4e-43
 Identities = 54/225 (24%), Positives = 81/225 (36%), Gaps = 43/225 (19%)

Query: 418 NHQDKDGWTPLTCSIKGQASLEVFHSIIEAGAD--IKAKLMDGTTALHLACYFGNLAMVN 475
           +H DK+G        +           I    D     +     T L +AC  G    ++
Sbjct: 2   SHMDKNGEIVEKIKDEK---------SINQNLDFLRNYRDSYNRTPLMVACMLGMENAID 52

Query: 476 YLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFA 534
            LV++   +  ++  G T + +A+KNN L I   LL  G++V  K  S  T L  +  F 
Sbjct: 53  KLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFG 112

Query: 535 SIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLA 593
             EM  FLL H   VN ++ +G TPL  A    + E+   L+   ADI            
Sbjct: 113 YSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI------------ 160

Query: 594 CATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLL 638
                             +  +  G T    A   G  E +K   
Sbjct: 161 ------------------SARDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  153 bits (390), Expect = 8e-43
 Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 8/158 (5%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAI-EKSRN-RTALHVAAIVESVDIVKLLFDYGAE 317
           TPL  A +      +  L+E       + +K     TAL  A     + I + L   G+ 
Sbjct: 37  TPLMVACMLGMENAIDKLVENFDK---LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN 93

Query: 318 KSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFN 377
             VN ++ +G TPL  +      E+   LL+ GA++N  N +G TPL  A      E+  
Sbjct: 94  --VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVK 151

Query: 378 YLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH 414
            L+  G D+S       TA   A  FG  E++    + 
Sbjct: 152 KLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEV 189

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  147 bits (373), Expect = 1e-40
 Identities = 47/236 (19%), Positives = 87/236 (36%), Gaps = 47/236 (19%)

Query: 612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
           +  +  GE    +       + + FL N ++           T L  AC     + ++ L
Sbjct: 2   SHMDKNGEIVEKIKDEKSINQNLDFLRNYRD-------SYNRTPLMVACMLGMENAIDKL 54

Query: 672 LEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYR 730
           +E    +   D    T L  A+  +  L I + L+  G++VN  +      TPL ++   
Sbjct: 55  VENFDKLEDKDIEGSTALIWAVKNN-RLGIAEKLLSKGSNVNTKDF--SGKTPLMWSIIF 111

Query: 731 GDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTS 790
           G  ++++ FL+E   A++  RN    T L  A+     +++K LL+ GAD      +D  
Sbjct: 112 G-YSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA---RD-- 164

Query: 791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
                                          G TA  +A    + ++IK+  +   
Sbjct: 165 -----------------------------LTGLTAEASARIFGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  139 bits (354), Expect = 4e-38
 Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 25/203 (12%)

Query: 549 NLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND---SPLHLACATGNMDMITYA 605
           +  D  G          +  +  + L N       Y++    +PL +AC  G  + I   
Sbjct: 2   SHMDKNGEIVEKIKDEKSINQNLDFLRN-------YRDSYNRTPLMVACMLGMENAI--- 51

Query: 606 MKYF-----DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFAC 660
                     +  ++  G T L  AV +  L   + LL+ K  +VN K   G T L ++ 
Sbjct: 52  -DKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLS-KGSNVNTKDFSGKTPLMWSI 109

Query: 661 YDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACY 719
                ++   LLE  A+VN  +    TPL  A       +I+K L++ GAD++  +    
Sbjct: 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG-RSEIVKKLLELGADISARDL--T 166

Query: 720 YMTPLHYASYRGDCNDIARFLVE 742
            +T    A   G   ++ +   E
Sbjct: 167 GLTAEASARIFG-RQEVIKIFTE 188

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  136 bits (346), Expect = 5e-37
 Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 14/169 (8%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
               L  A      +    LV+    L   D               T L  A+ N+ + +
Sbjct: 35  NRTPLMVACMLGMENAIDKLVENFDKLEDKD-----IEGS------TALIWAVKNNRLGI 83

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            + LL KG+N    + S  +T L  + I    ++   L ++GA   VN +N+ G TPL +
Sbjct: 84  AEKLLSKGSNVNTKDFS-GKTPLMWSIIFGYSEMSYFLLEHGAN--VNDRNLEGETPLIV 140

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH 382
           A +    EIVK LL+ GADI++ +  G T    A      EV       
Sbjct: 141 ASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEV 189

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  125 bits (317), Expect = 5e-33
 Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 9/169 (5%)

Query: 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
                   +   N    FL          R+  NRT L  A      + +  L++     
Sbjct: 10  IVEKIKDEKS-INQNLDFLRNY-------RDSYNRTPLMVACMLGMENAIDKLVENFDKL 61

Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
           +  D++ ++ L+ + +     I + LL   ++ N +    G T L  +      ++   L
Sbjct: 62  EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKD-FSGKTPLMWSIIFGYSEMSYFL 120

Query: 842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           L++ A++N  +  G+     A +    +IV  LL+ G++I       +T
Sbjct: 121 LEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLT 169

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 63.9 bits (157), Expect = 1e-11
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 12/103 (11%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G   L W++    ++++  L++ G  +N  +            E +TPL  A      E+
Sbjct: 101 GKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL-----------EGETPLIVASKYGRSEI 149

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGA 316
           VK LLE GA+  A + +   TA   A I    +++K+  +   
Sbjct: 150 VKKLLELGADISARDLTG-LTAEASARIFGRQEVIKIFTEVRR 191

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  167 bits (426), Expect = 6e-48
 Identities = 44/209 (21%), Positives = 78/209 (37%), Gaps = 44/209 (21%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGA-DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385
            +  +   CR      V++ LD    D+N G+D G +PL  A  +    V   L+  G  
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR 64

Query: 386 LSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHS 443
           ++V   G+ T LH+A+  G+ ++V  LL++  +IN  ++ G  P                
Sbjct: 65  INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVP---------------- 108

Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNH 502
                             LH AC++G   +   LV +   ++  N  G+ P+  A     
Sbjct: 109 ------------------LHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLR 150

Query: 503 LEIFNLLLKLGADVAVKMKSNFTCLHVAC 531
             +     K+G ++      N        
Sbjct: 151 ELLRERAEKMGQNL------NRIPYKDTF 173

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  158 bits (403), Expect = 7e-45
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 7/177 (3%)

Query: 615 NDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
            +     +      G   AV+  L+    D+N     G + L +AC + R  +VE+L+  
Sbjct: 3   PE-FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 675 NADVNLGD-GTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDC 733
            A +N+ + G  TPL+ A       DI++ L++Y AD+N  NE  +   PLHYA + G  
Sbjct: 62  GARINVMNRGDDTPLHLAASHG-HRDIVQKLLQYKADINAVNE--HGNVPLHYACFWG-Q 117

Query: 734 NDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTS 790
           + +A  LV    A +++ N      ++ A       L +   K G + + +  KDT 
Sbjct: 118 DQVAEDLV-ANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKDTF 173

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  153 bits (389), Expect = 7e-43
 Identities = 38/195 (19%), Positives = 71/195 (36%), Gaps = 34/195 (17%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH--IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGA 514
           +    +   C  GN   V   + +   D+N  +D G +P+++A +     +  +L+  GA
Sbjct: 4   EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA 63

Query: 515 DVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNH 573
            + V  + + T LH+A      ++V  LL +   +N  +  G  PLH A    Q +V   
Sbjct: 64  RINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAED 123

Query: 574 LINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEA 633
           L+ + A +                              +I N  GE P+  A +      
Sbjct: 124 LVANGALV------------------------------SICNKYGEMPVDKAKAPLRELL 153

Query: 634 VKFLLNTKNIDVNHK 648
            +        ++N  
Sbjct: 154 RERAEK-MGQNLNRI 167

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  147 bits (374), Expect = 7e-41
 Identities = 46/212 (21%), Positives = 76/212 (35%), Gaps = 45/212 (21%)

Query: 524 FTCLHVACEFASIEMVSFLLSH--IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
              +   C   +   V   L +    +N  D+ G +PLH A    +  V   LI   A I
Sbjct: 6   MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI 65

Query: 582 TMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTK 641
                                         N+ N   +TPLH+A SHG  + V+ LL   
Sbjct: 66  ------------------------------NVMNRGDDTPLHLAASHGHRDIVQKLLQ-Y 94

Query: 642 NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGD--GTYTPLYTALMKDPSLD 699
             D+N   + G+  L +AC+  +  + E L+   A V++ +  G   P+  A        
Sbjct: 95  KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYG-EMPVDKAKAPL-REL 152

Query: 700 IIKMLVKYGADVNLTNEACYYMTPLHYASYRG 731
           + +   K G ++N          P     ++G
Sbjct: 153 LRERAEKMGQNLN--------RIPYKDTFWKG 176

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  145 bits (369), Expect = 3e-40
 Identities = 46/194 (23%), Positives = 72/194 (37%), Gaps = 22/194 (11%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKG-VPLNLVDK-GVPLNYSRRIIETDTPLHSAILNSDI 271
               +    +E      +L +D     LN  D  G             +PLH A      
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHG------------FSPLHWACREGRS 52

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
            +V++L+ +GA    + +  + T LH+AA     DIV+ L  Y A+  +N  N  G  PL
Sbjct: 53  AVVEMLIMRGARINVMNRG-DDTPLHLAASHGHRDIVQKLLQYKAD--INAVNEHGNVPL 109

Query: 332 HIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG 391
           H AC     ++ + L+  GA ++  N  G  P+  A A     +       G +L     
Sbjct: 110 HYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL----- 164

Query: 392 ERTALHMASQFGNL 405
            R         G  
Sbjct: 165 NRIPYKDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  141 bits (359), Expect = 6e-39
 Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 2/164 (1%)

Query: 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA 779
           +M  +      G+     R  ++    D+   + +  + L++A       +++ L+  GA
Sbjct: 5   FMDDIFTQCREGNA-VAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA 63

Query: 780 DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839
             ++++  D +PL  +   G  +IV  LL+Y AD N    +HG+  LH A F  Q  + +
Sbjct: 64  RINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN-EHGNVPLHYACFWGQDQVAE 122

Query: 840 LLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEK 883
            L+   A ++  +KYG++    A       +       G N+ +
Sbjct: 123 DLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 72.9 bits (180), Expect = 7e-15
 Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 820 KHGSTALHTAAFHNQLDIIKLLLKYNA-DINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878
                 + T         ++L L     D+N  D +G    H AC+     +V  L+  G
Sbjct: 3   PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG 62

Query: 879 SNIEKATKYRMT 890
           + I    +   T
Sbjct: 63  ARINVMNRGDDT 74

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  162 bits (412), Expect = 4e-46
 Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 38/203 (18%)

Query: 280 KGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKC 339
           +G++      S     L  AA     D V++L   GA+  VN ++ +G TPLH+A     
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGAD--VNAEDASGWTPLHLAAFNGH 59

Query: 340 LEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHM 398
           LEIV++LL  GAD+N+ +  G TPL  A     LE+   L+ +G D++       T LH+
Sbjct: 60  LEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHL 119

Query: 399 ASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMD 457
           A+ FG+LE+V  LLK+  ++N QDK G T                               
Sbjct: 120 AAMFGHLEIVEVLLKNGADVNAQDKFGKTA------------------------------ 149

Query: 458 GTTALHLACYFGNLAMVNYLVKH 480
                 ++   GN  +   L K 
Sbjct: 150 ----FDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  155 bits (395), Expect = 8e-44
 Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 11/172 (6%)

Query: 377 NYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKG 434
           ++  +HG DL         L  A++ G  + V  L+ +  ++N +D  GWTPL   +  G
Sbjct: 5   HHHHHHGSDL------GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNG 58

Query: 435 QASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTP 493
              LE+   +++ GAD+ A    G T L LA  FG+L +V  L+K+  D+N+ +  G TP
Sbjct: 59  --HLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTP 116

Query: 494 IYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
           ++ A    HLEI  +LLK GADV  + K   T   ++ +  + ++   L   
Sbjct: 117 LHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  145 bits (370), Expect = 2e-40
 Identities = 64/230 (27%), Positives = 86/230 (37%), Gaps = 65/230 (28%)

Query: 448 GADI-KAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEI 505
           G+        D    L  A   G    V  L+ +  D+N+E+  G TP++ A  N HLEI
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEI 62

Query: 506 FNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVG 565
             +LLK GADV                                N  D+ G TPL  A + 
Sbjct: 63  VEVLLKNGADV--------------------------------NAVDHAGMTPLRLAALF 90

Query: 566 NQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVA 625
             LE+   L+ + AD+                              N  +  G TPLH+A
Sbjct: 91  GHLEIVEVLLKNGADV------------------------------NANDMEGHTPLHLA 120

Query: 626 VSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEAN 675
              G LE V+ LL     DVN + K G TA   +  +   DL EIL + N
Sbjct: 121 AMFGHLEIVEVLLK-NGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  139 bits (354), Expect = 3e-38
 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 18/171 (10%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
             K L  A +  + D  ++L+  G  +N  D               TPLH A  N  +E+
Sbjct: 14  LGKKLLEAARAGRDDEVRILMANGADVNAEDA-----------SGWTPLHLAAFNGHLEI 62

Query: 274 VKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           V++LL+ GA+   +    +   T L +AA+   ++IV++L   GA+  VN  ++ G TPL
Sbjct: 63  VEVLLKNGAD---VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD--VNANDMEGHTPL 117

Query: 332 HIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH 382
           H+A     LEIV++LL  GAD+N+ +  G T    +I     ++   L   
Sbjct: 118 HLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  135 bits (342), Expect = 1e-36
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 36/195 (18%)

Query: 549 NLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKY 608
           +   +     L  A    + +    L+ + AD+                           
Sbjct: 8   HHHGSDLGKKLLEAARAGRDDEVRILMANGADV--------------------------- 40

Query: 609 FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLV 668
              N E+  G TPLH+A  +G LE V+ LL     DVN     G T L  A     L++V
Sbjct: 41  ---NAEDASGWTPLHLAAFNGHLEIVEVLLK-NGADVNAVDHAGMTPLRLAALFGHLEIV 96

Query: 669 EILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYA 727
           E+LL+  ADVN  D   +TPL+ A M    L+I+++L+K GADVN  ++  +  T    +
Sbjct: 97  EVLLKNGADVNANDMEGHTPLHLAAMFG-HLEIVEVLLKNGADVNAQDK--FGKTAFDIS 153

Query: 728 SYRGDCNDIARFLVE 742
              G   D+A  L +
Sbjct: 154 IDNG-NEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  134 bits (341), Expect = 1e-36
 Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 4/168 (2%)

Query: 708 GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN 767
           G+  +  + +      L  A+  G  +D  R L+    AD+   + +  T L+ AAF  +
Sbjct: 3   GSHHHHHHGS-DLGKKLLEAARAG-RDDEVRILMA-NGADVNAEDASGWTPLHLAAFNGH 59

Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
           L++++ LLK GAD + +D    +PL  +   G  EIV+ LL+  AD N      G T LH
Sbjct: 60  LEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNAND-MEGHTPLH 118

Query: 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL 875
            AA    L+I+++LLK  AD+NA+DK+GK AF  +    N D+   L 
Sbjct: 119 LAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  132 bits (334), Expect = 1e-35
 Identities = 53/237 (22%), Positives = 83/237 (35%), Gaps = 73/237 (30%)

Query: 610 DVNIENDI-GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLV 668
             +  +       L  A   G  + V+ L+     DVN +   G T L  A ++  L++V
Sbjct: 5   HHHHHHGSDLGKKLLEAARAGRDDEVRILMA-NGADVNAEDASGWTPLHLAAFNGHLEIV 63

Query: 669 EILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYAS 728
           E+LL+  ADVN  D                         G            MTPL  A+
Sbjct: 64  EVLLKNGADVNAVD-----------------------HAG------------MTPLRLAA 88

Query: 729 YRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKD 788
             G   +I   L++   AD+   +    T L+ AA   +L++++ LLK GAD +  D   
Sbjct: 89  LFG-HLEIVEVLLKN-GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQD--- 143

Query: 789 TSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
                                          K G TA   +  +   D+ ++L K N
Sbjct: 144 -------------------------------KFGKTAFDISIDNGNEDLAEILQKLN 169

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  161 bits (409), Expect = 9e-46
 Identities = 44/192 (22%), Positives = 70/192 (36%), Gaps = 39/192 (20%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
               L  A  R  LE +  LL    ++N+ N  G T L         E+   L+  G + 
Sbjct: 5   WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM-KLGNPEIARRLLLRGANP 63

Query: 387 SVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSI 444
            +        +H A++ G L+ +  LL+   ++N +D +G  P                 
Sbjct: 64  DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLP----------------- 106

Query: 445 IEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH--IDINSENDLGKTPIYFAIKNNH 502
                            LHLA   G+L +V +LVKH   ++   N  G T    A     
Sbjct: 107 -----------------LHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR 149

Query: 503 LEIFNLLLKLGA 514
            E+ +L+   GA
Sbjct: 150 NEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  150 bits (382), Expect = 3e-42
 Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 5/159 (3%)

Query: 390 EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
           E     L  A+  G+LE +  LL++ +N+N Q+  G T L     G  + E+   ++  G
Sbjct: 3   EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLG--NPEIARRLLLRG 60

Query: 449 ADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFN 507
           A+   K   G   +H A   G L  +  L++   D+N E++ G  P++ A K  HL +  
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120

Query: 508 LLLKLGA-DVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
            L+K  A +V  +     T   +A  +   E+VS + ++
Sbjct: 121 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  150 bits (381), Expect = 4e-42
 Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 6/157 (3%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             L SA    D+E +  LL+   N  A      RTAL V  +  + +I + L   GA   
Sbjct: 7   NELASAAARGDLEQLTSLLQNNVNVNAQNGFG-RTALQVMKL-GNPEIARRLLLRGAN-- 62

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
            ++++  G   +H A R   L+ ++ LL+  AD+N  +++G  PL  A  +  L V  +L
Sbjct: 63  PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122

Query: 380 VNHG-CDLSVP-EGERTALHMASQFGNLEMVNYLLKH 414
           V H   ++        TA  +A  +G  E+V+ +  +
Sbjct: 123 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  140 bits (357), Expect = 8e-39
 Identities = 47/221 (21%), Positives = 78/221 (35%), Gaps = 64/221 (28%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
                L  A   G+L  +  L+++ +++N++N  G+T +    K  + EI   LL  GA+
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM-KLGNPEIARRLLLRGAN 62

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLI 575
                                            +L+D  G   +H A     L+    L+
Sbjct: 63  P--------------------------------DLKDRTGFAVIHDAARAGFLDTLQTLL 90

Query: 576 NSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVK 635
              AD+                              NIE++ G  PLH+A   G L  V+
Sbjct: 91  EFQADV------------------------------NIEDNEGNLPLHLAAKEGHLRVVE 120

Query: 636 FLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANA 676
           FL+     +V H+   G TA   A    R ++V ++    A
Sbjct: 121 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  137 bits (347), Expect = 2e-37
 Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 16/171 (9%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
               L  A      +    L+   V +N  +               T L    L +  E+
Sbjct: 5   WGNELASAAARGDLEQLTSLLQNNVNVNAQNG-----------FGRTALQVMKLGN-PEI 52

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            + LL +GANP   +++     +H AA    +D ++ L ++ A+  VN+++  G  PLH+
Sbjct: 53  ARRLLLRGANPDLKDRT-GFAVIHDAARAGFLDTLQTLLEFQAD--VNIEDNEGNLPLHL 109

Query: 334 ACRRKCLEIVKILLDKGA-DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG 383
           A +   L +V+ L+   A ++   N  G T    A      EV + +  +G
Sbjct: 110 AAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  128 bits (325), Expect = 2e-34
 Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)

Query: 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA 779
           +   L  A+ RG   +    L++  N ++  +N   RTAL     GN  ++ + LL  GA
Sbjct: 5   WGNELASAAARG-DLEQLTSLLQ-NNVNVNAQNGFGRTALQVMKLGN-PEIARRLLLRGA 61

Query: 780 DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839
           +PD+ D    + +  + R G  + + TLLE+ AD N+     G+  LH AA    L +++
Sbjct: 62  NPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIED-NEGNLPLHLAAKEGHLRVVE 120

Query: 840 LLLKYNA-DINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878
            L+K+ A ++   +  G  A   A      ++V+ +   G
Sbjct: 121 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  124 bits (313), Expect = 6e-33
 Identities = 43/193 (22%), Positives = 67/193 (34%), Gaps = 38/193 (19%)

Query: 552 DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDV 611
                  L  A     LE    L+ +N ++                              
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNV------------------------------ 31

Query: 612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
           N +N  G T L V    G  E  + LL  +  + + K + G   +  A     LD ++ L
Sbjct: 32  NAQNGFGRTALQVM-KLGNPEIARRLLL-RGANPDLKDRTGFAVIHDAARAGFLDTLQTL 89

Query: 672 LEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGA-DVNLTNEACYYMTPLHYASY 729
           LE  ADVN+ D     PL+ A  +   L +++ LVK+ A +V   N      T    A  
Sbjct: 90  LEFQADVNIEDNEGNLPLHLAAKEG-HLRVVEFLVKHTASNVGHRNH--KGDTACDLARL 146

Query: 730 RGDCNDIARFLVE 742
            G  N++   +  
Sbjct: 147 YG-RNEVVSLMQA 158

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  120 bits (304), Expect = 1e-31
 Identities = 38/199 (19%), Positives = 75/199 (37%), Gaps = 40/199 (20%)

Query: 649 TKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKY 707
            +     L  A     L+ +  LL+ N +VN  +G   T L    +   + +I + L+  
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLG--NPEIARRLLLR 59

Query: 708 GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN 767
           GA+ +L +        +H A+  G   D  + L+E   AD+ + +      L+ AA   +
Sbjct: 60  GANPDLKDR--TGFAVIHDAARAG-FLDTLQTLLEF-QADVNIEDNEGNLPLHLAAKEGH 115

Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
           L +++FL+K  A  ++   ++                                 G TA  
Sbjct: 116 LRVVEFLVKHTA-SNV-GHRN-------------------------------HKGDTACD 142

Query: 828 TAAFHNQLDIIKLLLKYNA 846
            A  + + +++ L+    A
Sbjct: 143 LARLYGRNEVVSLMQANGA 161

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  163 bits (415), Expect = 1e-45
 Identities = 53/282 (18%), Positives = 85/282 (30%), Gaps = 61/282 (21%)

Query: 260 TPLHSAILNSDIELVKLLLEK----GANPLAIEKSRN---RTALHVAAIVES---VDIVK 309
             L S +     E +  LLE              +     +T L  A +         + 
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 310 LLFDYGAEK---------SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDG 360
            L     +              +   G + LHIA  ++ L+ VK+L++ GAD++      
Sbjct: 64  PLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGR 123

Query: 361 CTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI----N 416
                                 G            L +A+     ++V YLL++     +
Sbjct: 124 FFQKHQGTC----------FYFG---------ELPLSLAACTKQWDVVTYLLENPHQPAS 164

Query: 417 INHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNY 476
           +   D  G T L             H        + A      +AL +  Y G L M   
Sbjct: 165 LEATDSLGNTVL-------------H-----ALVMIADNSPENSALVIHMYDGLLQMGAR 206

Query: 477 LVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVA 517
           L          N  G TP+  A K   +EIF  +L+     A
Sbjct: 207 LCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  133 bits (337), Expect = 4e-35
 Identities = 50/296 (16%), Positives = 90/296 (30%), Gaps = 67/296 (22%)

Query: 586 NDSPLHLACATGNMDMITYAMKYF---------DVNIENDIGETPLHVAVSH---GCLEA 633
           +   L    + G  + +T  ++Y              E   G+T L  AV +   G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 634 VKFLLN----------TKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGD- 682
           +  LL             N     +   G +AL  A   + L  V++L+E  ADV+L   
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121

Query: 683 GTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE 742
           G +   +                 +G              PL  A+      D+  +L+E
Sbjct: 122 GRFFQKHQG-----------TCFYFG------------ELPLSLAACTK-QWDVVTYLLE 157

Query: 743 --ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGL 800
                A +   +    T L+      +                 +  + S L+     GL
Sbjct: 158 NPHQPASLEATDSLGNTVLHALVMIAD-----------------NSPENSALVIHMYDGL 200

Query: 801 YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK 856
            ++   L        +     G T L  AA   +++I + +L+      A   +  
Sbjct: 201 LQMGARLCPTVQLEEISN-HQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHHH 255

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  129 bits (326), Expect = 1e-33
 Identities = 44/298 (14%), Positives = 82/298 (27%), Gaps = 87/298 (29%)

Query: 392 ERTALHMASQFGNLEMVNYLLKH---------ININHQDKDGWTPL-TCSIKGQA-SLEV 440
           +R  L      G  E +  LL++          +   +   G T L    +  Q      
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 441 FHSIIEAG-----------ADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDIN---- 484
              +++             A    +   G +ALH+A    +L  V  LV++  D++    
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121

Query: 485 ---------SENDLGKTPIYFAIKNNHLEIFNLLLKLG---ADVAVKMKSNFTCLHVACE 532
                    +    G+ P+  A      ++   LL+     A +        T LH    
Sbjct: 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALV- 180

Query: 533 FASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHL 592
                          +   ++   + L   +    L++   L  +               
Sbjct: 181 ---------------MIADNSPENSALVIHMYDGLLQMGARLCPTVQL------------ 213

Query: 593 ACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLN--TKNIDVNHK 648
                               I N  G TPL +A   G +E  + +L         +H 
Sbjct: 214 ------------------EEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHH 253

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  126 bits (319), Expect = 1e-32
 Identities = 52/277 (18%), Positives = 83/277 (29%), Gaps = 49/277 (17%)

Query: 187 KALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKK---TDIAKLLVDKGVPLNLV 243
           + L   L  +      L    Y   S G   L  A+   +         L+         
Sbjct: 16  EELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNP 75

Query: 244 DKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVE 303
              V    +    +  + LH AI    ++ VKLL+E GA+                  V 
Sbjct: 76  KPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD------------------VH 117

Query: 304 SVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKG---ADINSGNDDG 360
                        +K        G  PL +A   K  ++V  LL+     A + + +  G
Sbjct: 118 LRAC-----GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLG 172

Query: 361 CTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH-ININH 419
            T L               V    +      E +AL +    G L+M   L         
Sbjct: 173 NTVLHAL------------VMIADN----SPENSALVIHMYDGLLQMGARLCPTVQLEEI 216

Query: 420 QDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKL 455
            +  G TPL   + +G   +E+F  I++      A  
Sbjct: 217 SNHQGLTPLKLAAKEG--KIEIFRHILQREFSGAAAH 251

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 94.5 bits (235), Expect = 1e-21
 Identities = 35/223 (15%), Positives = 56/223 (25%), Gaps = 51/223 (22%)

Query: 719 YYMTPLHYASYRGDCNDIARFLVEEC------NADITLRNFNNRTALNFAAF---GNNLD 769
           +    L     RG   ++   L                     +T L  A          
Sbjct: 1   FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNA 60

Query: 770 LLKFLLKAGADPDIL-----------DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRT 818
            +  LL+   D                 +  S L  +  +   + V  L+E  AD +LR 
Sbjct: 61  CIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRA 120

Query: 819 ------------IKHGSTALHTAAFHNQLDIIKLLLK---YNADINAEDKYGKIAFHSAC 863
                          G   L  AA   Q D++  LL+     A + A D  G    H+  
Sbjct: 121 CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALV 180

Query: 864 QAKNW----------------DIVTFLLDAGSNIEKATKYRMT 890
              +                  +   L       E +    +T
Sbjct: 181 MIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLT 223

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 68.3 bits (167), Expect = 1e-12
 Identities = 27/135 (20%), Positives = 41/135 (30%), Gaps = 23/135 (17%)

Query: 788 DTSPLLSSCRQGLYEIVDTLLEY--------NADTNLRTIKHGSTALHTAAFH---NQLD 836
           D   L S   +G+ E +  LLEY                   G T L  A  +       
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEG-STGKTCLMKAVLNLQDGVNA 60

Query: 837 IIKLLLKY-----------NADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKAT 885
            I  LL+            NA    E   G  A H A + ++   V  L++ G+++    
Sbjct: 61  CIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRA 120

Query: 886 KYRMTFESSKVVEKH 900
             R   +        
Sbjct: 121 CGRFFQKHQGTCFYF 135

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  160 bits (407), Expect = 3e-44
 Identities = 48/281 (17%), Positives = 94/281 (33%), Gaps = 62/281 (22%)

Query: 260 TPLHSAILNSDIELVKLLLE-------KGANPLAIEKSRNRTALHVAAIVES---VDIVK 309
             +  A+  S+ + ++ LL        +  +    +    +T L  A +       D + 
Sbjct: 15  RSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIA 74

Query: 310 LLFDYGAEK---------SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDG 360
           LL D   +          S       G T LHIA  R+ + +V +L++ GAD+ +  +  
Sbjct: 75  LLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGD 134

Query: 361 CTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI----N 416
                                         GE   L +A+    L +V +LL++     +
Sbjct: 135 FFKK-----------------TKGRPGFYFGE-LPLSLAACTNQLAIVKFLLQNSWQPAD 176

Query: 417 INHQDKDGWTPL-TCSIKGQAS--------------LEVFHSIIEAGADIKAKLMDGTTA 461
           I+ +D  G T L         +              L +   +       +     G T 
Sbjct: 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTP 236

Query: 462 LHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNH 502
           L LA   G + ++ Y+++  +I+          + A  ++H
Sbjct: 237 LALAASSGKIGVLAYILQR-EIH-----EPECRHAAAHHHH 271

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  146 bits (370), Expect = 2e-39
 Identities = 49/334 (14%), Positives = 103/334 (30%), Gaps = 77/334 (23%)

Query: 281 GANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNV------AGLTPLHIA 334
            A      +  +R ++  A    +   ++ L  +       + +        G T L  A
Sbjct: 3   SAGEKP-PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKA 61

Query: 335 ---CRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG 391
                    + + +LLD     +S                        VN     S  +G
Sbjct: 62  MLNLHNGQNDTIALLLDVARKTDS--------------------LKQFVNASYTDSYYKG 101

Query: 392 ERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGAD 450
            +TALH+A +  N+ +V  L+++  ++       +                         
Sbjct: 102 -QTALHIAIERRNMTLVTLLVENGADVQAAANGDFFK--------------------KTK 140

Query: 451 IKAKLMDGTTALHLACYFGNLAMVNYLVKHI----DINSENDLGKTPIYFAIKNNHLEIF 506
            +     G   L LA     LA+V +L+++     DI++ + +G T ++  ++     + 
Sbjct: 141 GRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVD 200

Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGN 566
           N            + S +  + +    A +     L       + + KG TPL  A    
Sbjct: 201 NTKF---------VTSMYNEILILG--AKLHPTLKL-----EEITNRKGLTPLALAASSG 244

Query: 567 QLEVFNHLINSNADITMYKNDSPLHLACATGNMD 600
           ++ V  +++               H A    +  
Sbjct: 245 KIGVLAYILQREIH-----EPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  133 bits (337), Expect = 6e-35
 Identities = 53/337 (15%), Positives = 94/337 (27%), Gaps = 79/337 (23%)

Query: 447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHI--------DIN-SENDLGKTPIYFA 497
             A  K   +    ++  A    N   +  L+  +        D    + + GKT +  A
Sbjct: 2   VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKA 61

Query: 498 ---IKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNK 554
              + N   +   LLL +        +                       +        K
Sbjct: 62  MLNLHNGQNDTIALLLDVARKTDSLKQ---------------------FVNASYTDSYYK 100

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIE 614
           G T LH AI    + +   L+ + AD+    N                            
Sbjct: 101 GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKT----------------KGRPG 144

Query: 615 NDIGETPLHVAVSHGCLEAVKFLLN--TKNIDVNHKTKDGSTALFFACYDKRLDLVEILL 672
              GE PL +A     L  VKFLL    +  D++ +   G+T L          +     
Sbjct: 145 FYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKF 204

Query: 673 EANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD 732
             +                 M +  L +   L        +TN     +TPL  A+  G 
Sbjct: 205 VTS-----------------MYNEILILGAKLHPTLKLEEITNR--KGLTPLALAASSG- 244

Query: 733 CNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLD 769
              +  ++++        R  +     + AA  ++  
Sbjct: 245 KIGVLAYILQ--------REIHEPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  132 bits (334), Expect = 2e-34
 Identities = 47/321 (14%), Positives = 87/321 (27%), Gaps = 88/321 (27%)

Query: 392 ERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
           +R ++  A    N + +  LL                                 +   D 
Sbjct: 13  DRRSIFDAVAQSNCQELESLL--------------------------PFLQRSKKRLTDS 46

Query: 452 KAKLMD-GTTALHLA---CYFGNLAMVNYLVKH------------IDINSENDLGKTPIY 495
           + K  + G T L  A    + G    +  L+                       G+T ++
Sbjct: 47  EFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALH 106

Query: 496 FAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKG 555
            AI+  ++ +  LL++ GADV      +F                              G
Sbjct: 107 IAIERRNMTLVTLLVENGADVQAAANGDFFKKTKG------------------RPGFYFG 148

Query: 556 CTPLHCAIVGNQLEVFNHLIN---SNADITMYKND--SPLHLACATGNMDMITYAMKYFD 610
             PL  A   NQL +   L+      ADI+   +   + LH      +            
Sbjct: 149 ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVAD------------ 196

Query: 611 VNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEI 670
               N +  T    ++ +  L      L+          + G T L  A    ++ ++  
Sbjct: 197 ----NTVDNTKFVTSMYNEILILGA-KLHPTLKLEEITNRKGLTPLALAASSGKIGVLAY 251

Query: 671 LLEANADVNLGDGTYTPLYTA 691
           +L+               + A
Sbjct: 252 ILQREIHEP------ECRHAA 266

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  129 bits (327), Expect = 1e-33
 Identities = 50/254 (19%), Positives = 84/254 (33%), Gaps = 39/254 (15%)

Query: 184 NSDKALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWAL---QEKKTDIAKLLVDKGVPL 240
           ++ + LE  L  + +    L   E+     G   L  A+      + D   LL+D     
Sbjct: 24  SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83

Query: 241 NLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGAN-------------PLAI 287
           + + + V  +Y+    +  T LH AI   ++ LV LL+E GA+                 
Sbjct: 84  DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRP 143

Query: 288 EKSRNRTALHVAAIVESVDIVKLLFDYGAEK-SVNVQNVAGLTPLHIACRR--------- 337
                   L +AA    + IVK L     +   ++ ++  G T LH              
Sbjct: 144 GFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTK 203

Query: 338 -------KCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPE 390
                  + L +   L          N  G TPL  A +   + V  Y++          
Sbjct: 204 FVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH----- 258

Query: 391 GERTALHMASQFGN 404
            E    H A+   +
Sbjct: 259 -EPECRHAAAHHHH 271

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  128 bits (324), Expect = 4e-33
 Identities = 47/306 (15%), Positives = 91/306 (29%), Gaps = 73/306 (23%)

Query: 584 YKNDSPLHLACATGNMDMITYAMKYFDVNIEN---------DIGETPLHVAVSH---GCL 631
             +   +  A A  N   +   + +   + +          + G+T L  A+ +   G  
Sbjct: 11  LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQN 70

Query: 632 EAVKFLLNTK----------NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLG 681
           + +  LL+            N         G TAL  A   + + LV +L+E  ADV   
Sbjct: 71  DTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130

Query: 682 D-GTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFL 740
             G +                                 +   PL  A+       I +FL
Sbjct: 131 ANGDFFKKT----------------------KGRPGFYFGELPLSLAACTN-QLAIVKFL 167

Query: 741 VE--ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQ 798
           ++     ADI+ R+    T L+      +                    D +  ++S   
Sbjct: 168 LQNSWQPADISARDSVGNTVLHALVEVADNT-----------------VDNTKFVTSMYN 210

Query: 799 GLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIA 858
            +  +   L        +   + G T L  AA   ++ ++  +L+        + +    
Sbjct: 211 EILILGAKLHPTLKLEEITN-RKGLTPLALAASSGKIGVLAYILQ-------REIHEPEC 262

Query: 859 FHSACQ 864
            H+A  
Sbjct: 263 RHAAAH 268

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  107 bits (270), Expect = 4e-26
 Identities = 45/298 (15%), Positives = 86/298 (28%), Gaps = 71/298 (23%)

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNT------KNIDVNHK-TKDGSTALFFA--- 659
                       +  AV+    + ++ LL        +  D   K  + G T L  A   
Sbjct: 5   GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLN 64

Query: 660 CYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACY 719
            ++ + D + +LL+     +                         +K   + + T+    
Sbjct: 65  LHNGQNDTIALLLDVARKTDS------------------------LKQFVNASYTDSYYK 100

Query: 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNN--------------RTALNFAAFG 765
             T LH A  R     +   LVE   AD+      +                 L+ AA  
Sbjct: 101 GQTALHIAIERR-NMTLVTLLVE-NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACT 158

Query: 766 NNLDLLKFLLKAG---ADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHG 822
           N L ++KFLL+     AD    D    + L +        + +T                
Sbjct: 159 NQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKF-------------- 204

Query: 823 STALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
                T+ ++  L +   L          ++ G      A  +    ++ ++L    +
Sbjct: 205 ----VTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 87.9 bits (218), Expect = 3e-19
 Identities = 36/210 (17%), Positives = 57/210 (27%), Gaps = 51/210 (24%)

Query: 707 YGADVNLTNEACYYMTPLHYASYRGDCNDIARFLV-----EECNADITLRNFNN-RTALN 760
             A         Y    +  A  + +C ++   L      ++   D   ++    +T L 
Sbjct: 2   VSAGEK--PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLL 59

Query: 761 FAAF---GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLR 817
            A         D +  LL      D L                          NA     
Sbjct: 60  KAMLNLHNGQNDTIALLLDVARKTDSLKQ----------------------FVNASYTDS 97

Query: 818 TIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK--------------YGKIAFHSAC 863
               G TALH A     + ++ LL++  AD+ A                 +G++    A 
Sbjct: 98  Y-YKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAA 156

Query: 864 QAKNWDIVTFLLDAGS---NIEKATKYRMT 890
                 IV FLL       +I        T
Sbjct: 157 CTNQLAIVKFLLQNSWQPADISARDSVGNT 186

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  154 bits (393), Expect = 9e-44
 Identities = 47/193 (24%), Positives = 71/193 (36%), Gaps = 39/193 (20%)

Query: 291 RNRTALHVAAIVESVDIVK-LLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDK 349
           R    L  AA    V  V+ LL         +  N  G T L +        I   LL +
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVH--PDALNRFGKTALQVMMF-GSTAIALELLKQ 57

Query: 350 GADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMV 408
           GA  N  +  G +P+  A     L+    LV HG D++VP+G     +H+A Q G+  +V
Sbjct: 58  GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVV 117

Query: 409 NYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYF 468
           ++L    +++ +D  G TP                                  L LA   
Sbjct: 118 SFLAAESDLHRRDARGLTP----------------------------------LELALQR 143

Query: 469 GNLAMVNYLVKHI 481
           G   +V+ L  H+
Sbjct: 144 GAQDLVDILQGHM 156

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  146 bits (370), Expect = 1e-40
 Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 6/156 (3%)

Query: 394 TALHMASQFGNLEMVNYLL-KH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
             L  A+  G+++ V  LL +  ++ +  ++ G T L   + G  S  +   +++ GA  
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFG--STAIALELLKQGASP 61

Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
             +   GT+ +H A   G L  +  LV+H  D+N  +  G  PI+ A++  H  + + L 
Sbjct: 62  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121

Query: 511 KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHI 546
              +D+  +     T L +A +  + ++V  L  H+
Sbjct: 122 A-ESDLHRRDARGLTPLELALQRGAQDLVDILQGHM 156

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  136 bits (344), Expect = 4e-37
 Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 8/160 (5%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
               L  A + G ++ V+ LL+ + +  +   + G TAL    +     +   LL+  A 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFG-STAIALELLKQGAS 60

Query: 678 VNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI 736
            N+ D +  +P++ A      LD +K+LV++GADVN+ +       P+H A   G    +
Sbjct: 61  PNVQDTSGTSPVHDAARTG-FLDTLKVLVEHGADVNVPDG--TGALPIHLAVQEG-HTAV 116

Query: 737 ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK 776
             FL     +D+  R+    T L  A      DL+  L  
Sbjct: 117 VSFLAA--ESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  134 bits (339), Expect = 2e-36
 Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 4/155 (2%)

Query: 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
             L  A+ RGD     R L+          N   +TAL    FG+   +   LLK GA P
Sbjct: 4   DRLSGAAARGDV-QEVRRLLHRELVHPDALNRFGKTALQVMMFGS-TAIALELLKQGASP 61

Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
           ++ D   TSP+  + R G  + +  L+E+ AD N+     G+  +H A       ++  L
Sbjct: 62  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPD-GTGALPIHLAVQEGHTAVVSFL 120

Query: 842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD 876
               +D++  D  G      A Q    D+V  L  
Sbjct: 121 AA-ESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  130 bits (331), Expect = 2e-35
 Identities = 46/218 (21%), Positives = 69/218 (31%), Gaps = 67/218 (30%)

Query: 458 GTTALHLACYFGNLAMVNYLV-KH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
               L  A   G++  V  L+ +  +  ++ N  GKT +   +      I   LLK GA 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGAS 60

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLI 575
                                            N+QD  G +P+H A     L+    L+
Sbjct: 61  P--------------------------------NVQDTSGTSPVHDAARTGFLDTLKVLV 88

Query: 576 NSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVK 635
              AD+                              N+ +  G  P+H+AV  G    V 
Sbjct: 89  EHGADV------------------------------NVPDGTGALPIHLAVQEGHTAVVS 118

Query: 636 FLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE 673
           FL      D++ +   G T L  A      DLV+IL  
Sbjct: 119 FLA--AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  123 bits (311), Expect = 1e-32
 Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 37/190 (19%)

Query: 554 KGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNI 613
           +    L  A     ++    L++               L                   + 
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHR-------------ELV----------------HPDA 31

Query: 614 ENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE 673
            N  G+T L V    G       LL  +    N +   G++ +  A     LD +++L+E
Sbjct: 32  LNRFGKTALQVM-MFGSTAIALELLK-QGASPNVQDTSGTSPVHDAARTGFLDTLKVLVE 89

Query: 674 ANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGD 732
             ADVN+ DGT   P++ A+ +     ++  L    +D++  +     +TPL  A  RG 
Sbjct: 90  HGADVNVPDGTGALPIHLAVQEG-HTAVVSFLAA-ESDLHRRDA--RGLTPLELALQRG- 144

Query: 733 CNDIARFLVE 742
             D+   L  
Sbjct: 145 AQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 99.0 bits (248), Expect = 3e-24
 Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 49/169 (28%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G  AL        T IA  L+ +G   N+ D                             
Sbjct: 36  GKTALQVM-MFGSTAIALELLKQGASPNVQDTS--------------------------- 67

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
                               + +H AA    +D +K+L ++GA+  VNV +  G  P+H+
Sbjct: 68  ------------------GTSPVHDAARTGFLDTLKVLVEHGAD--VNVPDGTGALPIHL 107

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH 382
           A +     +V  L    +D++  +  G TPL  A+ +   ++ + L  H
Sbjct: 108 AVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 69.0 bits (170), Expect = 1e-13
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 822 GSTALHTAAFHNQLDIIK-LLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
               L  AA    +  ++ LL +     +A +++GK A        +  I   LL  G++
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGAS 60

Query: 881 IEKATKYRMT 890
                    +
Sbjct: 61  PNVQDTSGTS 70

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  150 bits (383), Expect = 2e-42
 Identities = 46/185 (24%), Positives = 73/185 (39%), Gaps = 36/185 (19%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
               L  A R    + V+IL+  GA   + +  G +PL  A           L+  G   
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 387 SVP-EGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSII 445
               + +RT LHMA+  G+  +V  LLKH                               
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKH------------------------------- 89

Query: 446 EAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLE 504
             GAD+ AK M   TALH A    +  +V  L+K+  D+++++   KT    +I N + +
Sbjct: 90  --GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNED 147

Query: 505 IFNLL 509
           +  +L
Sbjct: 148 LAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  150 bits (382), Expect = 2e-42
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 7/154 (4%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRN-RTALHVAAIVESVDIVKLLFDYGAEK 318
             L  A      + V++L+  GA            + LH+AA        ++L   G   
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAP---FTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS- 59

Query: 319 SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNY 378
             + +     TPLH+A       IV++LL  GAD+N+ +    T L  A   N  EV   
Sbjct: 60  -RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL 118

Query: 379 LVNHGCDLSVP-EGERTALHMASQFGNLEMVNYL 411
           L+ +G D+    +  +TA  ++   GN ++   L
Sbjct: 119 LIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  138 bits (350), Expect = 6e-38
 Identities = 39/183 (21%), Positives = 65/183 (35%), Gaps = 33/183 (18%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           D    L  A   G    V  L+ +     ++   G +P++ A +  H     +LL+ G  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDWL-GTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHL 574
              + K + T LH+A       +V  LL H   VN +D    T LH A   N  EV   L
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 575 INSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAV 634
           I   AD+                              + ++   +T   +++ +G  +  
Sbjct: 120 IKYGADV------------------------------HTQSKFCKTAFDISIDNGNEDLA 149

Query: 635 KFL 637
           + L
Sbjct: 150 EIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  136 bits (346), Expect = 2e-37
 Identities = 41/183 (22%), Positives = 67/183 (36%), Gaps = 36/183 (19%)

Query: 394 TALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKA 453
             L  A++ G  + V  L+ +                                 GA    
Sbjct: 4   KKLLEAARAGQDDEVRILMAN---------------------------------GAPFTT 30

Query: 454 KLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
               GT+ LHLA  +G+ +    L++  +  ++   + +TP++ A    H  I  +LLK 
Sbjct: 31  D-WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKH 89

Query: 513 GADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVF 571
           GADV  K     T LH A E    E+V  L+ +   V+ Q     T    +I     ++ 
Sbjct: 90  GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA 149

Query: 572 NHL 574
             L
Sbjct: 150 EIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  136 bits (345), Expect = 2e-37
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 15/166 (9%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
             K L  A +  + D  ++L+  G P      G             +PLH A        
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTTDWLG------------TSPLHLAAQYGHFST 49

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            ++LL  G +  A  K  +RT LH+AA     +IV++L  +GA+  VN +++  +T LH 
Sbjct: 50  TEVLLRAGVSRDARTKV-DRTPLHMAASEGHANIVEVLLKHGAD--VNAKDMLKMTALHW 106

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           A      E+V++L+  GAD+++ +    T    +I     ++   L
Sbjct: 107 ATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  127 bits (321), Expect = 4e-34
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)

Query: 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
             L  A+  G  +D  R L+    A  T  ++   + L+ AA   +    + LL+AG   
Sbjct: 4   KKLLEAARAG-QDDEVRILMA-NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
           D     D +PL  +  +G   IV+ LL++ AD N +      TALH A  HN  ++++LL
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKD-MLKMTALHWATEHNHQEVVELL 119

Query: 842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           +KY AD++ + K+ K AF  +    N D+   L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  126 bits (320), Expect = 5e-34
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 8/158 (5%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
               L  A   G  + V+ L+             G++ L  A         E+LL A   
Sbjct: 2   LGKKLLEAARAGQDDEVRILMA-NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 678 VNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI 736
            +       TPL+ A  +    +I+++L+K+GADVN  +     MT LH+A+      ++
Sbjct: 60  RDARTKVDRTPLHMAASEG-HANIVEVLLKHGADVNAKDM--LKMTALHWATEHN-HQEV 115

Query: 737 ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFL 774
              L++   AD+  ++   +TA + +    N DL + L
Sbjct: 116 VELLIKY-GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  124 bits (315), Expect = 2e-33
 Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 37/187 (19%)

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIE 614
               L  A    Q +    L+ + A  T                                
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFT-------------------------------T 30

Query: 615 NDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
           + +G +PLH+A  +G     + LL    +  + +TK   T L  A  +   ++VE+LL+ 
Sbjct: 31  DWLGTSPLHLAAQYGHFSTTEVLLR-AGVSRDARTKVDRTPLHMAASEGHANIVEVLLKH 89

Query: 675 NADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDC 733
            ADVN  D    T L+ A   +   +++++L+KYGADV+  ++ C   T    +   G  
Sbjct: 90  GADVNAKDMLKMTALHWATEHN-HQEVVELLIKYGADVHTQSKFCK--TAFDISIDNG-N 145

Query: 734 NDIARFL 740
            D+A  L
Sbjct: 146 EDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  112 bits (283), Expect = 5e-29
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
           +    L  AA     D ++ L+  GA     D   TSPL  + + G +   + LL     
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
            + RT K   T LH AA     +I+++LLK+ AD+NA+D     A H A +  + ++V  
Sbjct: 60  RDART-KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL 118

Query: 874 LLDAGSNIEKATKYRMT 890
           L+  G+++   +K+  T
Sbjct: 119 LIKYGADVHTQSKFCKT 135

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  150 bits (381), Expect = 3e-42
 Identities = 34/192 (17%), Positives = 56/192 (29%), Gaps = 42/192 (21%)

Query: 317 EKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVF 376
           E +           L  A  R  +E V+ LL+ GA+ N+ N  G  P+          V 
Sbjct: 2   EPAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSARVA 60

Query: 377 NYLVNHGCDLSV--PEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKG 434
             L+ HG + +   P      +H A++ G L+ +  L +                     
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA-------------------- 100

Query: 435 QASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTP 493
                        GA +  +   G   + LA   G+  +  YL             G   
Sbjct: 101 -------------GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR-----GSNH 142

Query: 494 IYFAIKNNHLEI 505
                     +I
Sbjct: 143 ARIDAAEGPSDI 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  141 bits (359), Expect = 3e-39
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 9/151 (5%)

Query: 259 DTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK 318
              L +A     +E V+ LLE GANP A      R  + V  +  S  + +LL  +GAE 
Sbjct: 13  ADWLATAAARGRVEEVRALLEAGANPNAPNS-YGRRPIQVMMM-GSARVAELLLLHGAE- 69

Query: 319 SVNVQNVAGLT-PLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFN 377
             N  + A LT P+H A R   L+ + +L   GA ++  +  G  P+  A      +V  
Sbjct: 70  -PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVAR 128

Query: 378 YLVNHGCDLSVPEGERTALHMASQFGNLEMV 408
           YL                  + +  G  ++ 
Sbjct: 129 YLRAAAGGTR----GSNHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  122 bits (309), Expect = 2e-32
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 9/157 (5%)

Query: 705 VKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF 764
           ++  A  ++          L  A+ RG   +  R L+E   A+    N   R  +     
Sbjct: 1   MEPAAGSSMEPS----ADWLATAAARG-RVEEVRALLE-AGANPNAPNSYGRRPIQVMMM 54

Query: 765 GNNLDLLKFLLKAGADPDILDLKD-TSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGS 823
           G+   + + LL  GA+P+  D    T P+  + R+G  + +  L    A  ++R    G 
Sbjct: 55  GS-ARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRD-AWGR 112

Query: 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFH 860
             +  A      D+ + L          +     A  
Sbjct: 113 LPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  120 bits (303), Expect = 1e-31
 Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 1/137 (0%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
            +   L  AA    ++ ++ LL+AGA+P+  +     P+      G   + + LL + A+
Sbjct: 11  PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHGAE 69

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
            N       +  +H AA    LD + +L +  A ++  D +G++    A +  + D+  +
Sbjct: 70  PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 129

Query: 874 LLDAGSNIEKATKYRMT 890
           L  A      +   R+ 
Sbjct: 130 LRAAAGGTRGSNHARID 146

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  119 bits (301), Expect = 2e-31
 Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 19/162 (11%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
               L  A    + +  + L++ G   N  +     +Y R       P+   ++ S   +
Sbjct: 12  SADWLATAAARGRVEEVRALLEAGANPNAPN-----SYGR------RPIQVMMMGS-ARV 59

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            +LLL  GA P   + +     +H AA    +D + +L   GA   ++V++  G  P+ +
Sbjct: 60  AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR--LDVRDAWGRLPVDL 117

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
           A      ++ + L             G        A+   ++
Sbjct: 118 AEELGHRDVARYLRAAAGGTR-----GSNHARIDAAEGPSDI 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  116 bits (292), Expect = 3e-30
 Identities = 28/183 (15%), Positives = 49/183 (26%), Gaps = 40/183 (21%)

Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLE 569
           +       M+ +   L  A     +E V  LL   G   N  ++ G  P+   ++G+   
Sbjct: 1   MEPAAGSSMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMMMGS-AR 58

Query: 570 VFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGET-PLHVAVSH 628
           V   L+   A+                               N  +    T P+H A   
Sbjct: 59  VAELLLLHGAE------------------------------PNCADPATLTRPVHDAARE 88

Query: 629 GCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPL 688
           G L+ +  L       ++ +   G   +  A      D+   L  A              
Sbjct: 89  GFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR----GSNHA 143

Query: 689 YTA 691
              
Sbjct: 144 RID 146

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  114 bits (289), Expect = 8e-30
 Identities = 40/195 (20%), Positives = 63/195 (32%), Gaps = 45/195 (23%)

Query: 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIK 702
                 +  +  L  A    R++ V  LLEA A+ N  +     P+   +M   S  + +
Sbjct: 4   AAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMG--SARVAE 61

Query: 703 MLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFA 762
           +L+ +GA+ N  + A     P+H A+  G                               
Sbjct: 62  LLLLHGAEPNCADPA-TLTRPVHDAAREG------------------------------- 89

Query: 763 AFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHG 822
                LD L  L +AGA  D+ D     P+  +   G  ++   L      T       G
Sbjct: 90  ----FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR------G 139

Query: 823 STALHTAAFHNQLDI 837
           S      A     DI
Sbjct: 140 SNHARIDAAEGPSDI 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  112 bits (284), Expect = 4e-29
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 14/166 (8%)

Query: 575 INSNADITMYKNDSPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGCLEA 633
           +   A  +M  +   L  A A G ++ +   ++   + N  N  G  P+ V    G    
Sbjct: 1   MEPAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSARV 59

Query: 634 VKFLLNTKNIDVNHKTKDGST-ALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTA 691
            + LL     + N       T  +  A  +  LD + +L  A A +++ D     P+  A
Sbjct: 60  AELLLL-HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLA 118

Query: 692 LMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIA 737
                  D+ + L         +             +  G   DI 
Sbjct: 119 EELG-HRDVARYLRAAAGGTRGS-------NHARIDAAEGPS-DIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 81.4 bits (202), Expect = 4e-18
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 808 LEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN 867
           +E  A ++   ++  +  L TAA   +++ ++ LL+  A+ NA + YG+          +
Sbjct: 1   MEPAAGSS---MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GS 56

Query: 868 WDIVTFLLDAGSNIEKATKYRMT 890
             +   LL  G+    A    +T
Sbjct: 57  ARVAELLLLHGAEPNCADPATLT 79

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  148 bits (376), Expect = 4e-41
 Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 40/203 (19%)

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
            +     G     I  +              AD+     +                    
Sbjct: 7   GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEY------------------- 44

Query: 380 VNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTC-SIKGQASL 438
                         T    A++  + + ++ LL+  +++  D++G T L   +  G  S 
Sbjct: 45  -------------ETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLG--SD 89

Query: 439 EVFHSIIEAGADIKAK-LMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYF 496
           +    + EAGAD+  + +  G TALH+A  +    +V  LV+   DI  E++ G T +  
Sbjct: 90  KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALEL 149

Query: 497 AIKNNHLEIFNLLLKLGADVAVK 519
           A +          ++ G  + ++
Sbjct: 150 AREILKTTPKGNPMQFGRRIGLE 172

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  138 bits (350), Expect = 1e-37
 Identities = 32/174 (18%), Positives = 67/174 (38%), Gaps = 10/174 (5%)

Query: 412 LKHININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGN 470
           +  I  +    +G          G      +       AD+ ++     T    A    +
Sbjct: 2   VNKIIGSRTAGEGAMEYLIEWKDGH--SPSWVPSSYIAADVVSE---YETPWWTAARKAD 56

Query: 471 LAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVK-MKSNFTCLHV 529
              ++ L++  D+++ ++ G+T + F       +   LL + GAD+  + M+   T LH+
Sbjct: 57  EQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 116

Query: 530 ACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADI 581
           A  +   E+V  L+   G  + ++D +G T L  A    +     + +     I
Sbjct: 117 AAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI 169

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  133 bits (338), Expect = 5e-36
 Identities = 46/239 (19%), Positives = 72/239 (30%), Gaps = 74/239 (30%)

Query: 643 IDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIK 702
           I  +    +G+        D             ADV                        
Sbjct: 5   IIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV----------------------- 41

Query: 703 MLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFA 762
                            Y TP   A+ + D       L+E  + D+   + N RTAL F 
Sbjct: 42  ---------------SEYETPWWTAARKAD-EQALSQLLE--DRDVDAVDENGRTALLFV 83

Query: 763 AFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHG 822
           A   +   ++ L +AGAD D  D++                                  G
Sbjct: 84  AGLGSDKCVRLLAEAGADLDHRDMRG---------------------------------G 110

Query: 823 STALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881
            TALH AA + + ++++ L++  ADI  ED+ G  A   A +          +  G  I
Sbjct: 111 LTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI 169

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  133 bits (338), Expect = 5e-36
 Identities = 42/205 (20%), Positives = 81/205 (39%), Gaps = 35/205 (17%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI 271
            +G        ++  +             ++V +             +TP  +A   +D 
Sbjct: 12  GEGAMEYLIEWKDGHSPSWVPSSYIAA--DVVSEY------------ETPWWTAARKADE 57

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNV-AGLTP 330
           + +  LLE   +  A++++  RTAL   A + S   V+LL + GA+  ++ +++  GLT 
Sbjct: 58  QALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGAD--LDHRDMRGGLTA 113

Query: 331 LHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPE 390
           LH+A      E+V+ L++ GADI   ++ G T L  A            +  G  +    
Sbjct: 114 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI---- 169

Query: 391 GERTALHMASQFGNLEMVNYLLKHI 415
                       G  +++N L   +
Sbjct: 170 ------------GLEKVINVLEGQV 182

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  127 bits (323), Expect = 5e-34
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 5/170 (2%)

Query: 546 IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYA 605
           I  +    +G               +       AD+   + ++P   A    +   ++  
Sbjct: 5   IIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS-EYETPWWTAARKADEQALSQL 63

Query: 606 MKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHK-TKDGSTALFFACYDKR 664
           ++  DV+  ++ G T L      G  + V+ L      D++H+  + G TAL  A    R
Sbjct: 64  LEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAE-AGADLDHRDMRGGLTALHMAAGYVR 122

Query: 665 LDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNL 713
            ++VE L+E  AD+ + D    T L  A             +++G  + L
Sbjct: 123 PEVVEALVELGADIEVEDERGLTALELAREIL-KTTPKGNPMQFGRRIGL 171

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  120 bits (303), Expect = 2e-31
 Identities = 36/184 (19%), Positives = 62/184 (33%), Gaps = 13/184 (7%)

Query: 611 VNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEI 670
            +     G     +    G   +          DV     +  T  + A        +  
Sbjct: 7   GSRTAGEGAMEYLIEWKDGHSPSWVPSSY-IAADVV---SEYETPWWTAARKADEQALSQ 62

Query: 671 LLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASY 729
           LLE + DV+  D    T L        S   +++L + GAD++  +     +T LH A+ 
Sbjct: 63  LLE-DRDVDAVDENGRTALLFVAGLG-SDKCVRLLAEAGADLDHRDMR-GGLTALHMAAG 119

Query: 730 RGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789
                ++   LVE   ADI + +    TAL  A            ++ G     + L+  
Sbjct: 120 YV-RPEVVEALVEL-GADIEVEDERGLTALELAREILKTTPKGNPMQFGRR---IGLEKV 174

Query: 790 SPLL 793
             +L
Sbjct: 175 INVL 178

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  102 bits (256), Expect = 5e-25
 Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 6/140 (4%)

Query: 752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYN 811
                          +           AD   +  +  +P  ++ R+   + +  LLE +
Sbjct: 11  AGEGAMEYLIEWKDGHSPSWVPSSYIAAD---VVSEYETPWWTAARKADEQALSQLLE-D 66

Query: 812 ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED-KYGKIAFHSACQAKNWDI 870
            D +    ++G TAL   A       ++LL +  AD++  D + G  A H A      ++
Sbjct: 67  RDVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEV 125

Query: 871 VTFLLDAGSNIEKATKYRMT 890
           V  L++ G++IE   +  +T
Sbjct: 126 VEALVELGADIEVEDERGLT 145

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 54.4 bits (132), Expect = 1e-08
 Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 4/82 (4%)

Query: 809 EYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW 868
           E N     RT   G+                      AD+ +E    +  + +A +  + 
Sbjct: 1   EVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADE 57

Query: 869 DIVTFLLDAGSNIEKATKYRMT 890
             ++ LL    +++   +   T
Sbjct: 58  QALSQLL-EDRDVDAVDENGRT 78

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  147 bits (373), Expect = 5e-41
 Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 6/158 (3%)

Query: 259 DTPLHSAILNSDIELVKLLLEK-GANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAE 317
           D  L  A    D+E VK L      N   IE  R  T LH AA    V +V+ L  +GA+
Sbjct: 9   DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEG-RQSTPLHFAAGYNRVSVVEYLLQHGAD 67

Query: 318 KSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFN 377
             V+ ++  GL PLH AC     E+ ++L+  GA +N  +    TPL  A A+   E+  
Sbjct: 68  --VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICK 125

Query: 378 YLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH 414
            L+ HG D +       T L +    G+ ++ + L   
Sbjct: 126 LLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGD 162

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  147 bits (373), Expect = 5e-41
 Identities = 46/194 (23%), Positives = 67/194 (34%), Gaps = 37/194 (19%)

Query: 324 NVAGLTPLHIACRRKCLEIVKILLDK-GADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH 382
           N      L  A +   +E VK L      +         TPL  A   N + V  YL+ H
Sbjct: 5   NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH 64

Query: 383 GCDLSVP-EGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVF 441
           G D+    +G    LH A  +G+ E+   L+KH                           
Sbjct: 65  GADVHAKDKGGLVPLHNACSYGHYEVAELLVKH--------------------------- 97

Query: 442 HSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKN 500
                 GA +    +   T LH A   G   +   L++H  D   +N  G TP+    K+
Sbjct: 98  ------GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KD 150

Query: 501 NHLEIFNLLLKLGA 514
              +I +LL    A
Sbjct: 151 GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  144 bits (366), Expect = 5e-40
 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 7/157 (4%)

Query: 393 RTALHMASQFGNLEMVNYLLKH--ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGA 449
              L  A++ G++E V  L     +N    +    TPL   +      + V   +++ GA
Sbjct: 9   DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYN--RVSVVEYLLQHGA 66

Query: 450 DIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNL 508
           D+ AK   G   LH AC +G+  +   LVKH   +N  +    TP++ A      EI  L
Sbjct: 67  DVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKL 126

Query: 509 LLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
           LL+ GAD   K +   T L +  +    ++   L   
Sbjct: 127 LLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGD 162

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  140 bits (357), Expect = 7e-39
 Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 8/169 (4%)

Query: 612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
              ++  +  L  A   G +E VK L   ++++        ST L FA    R+ +VE L
Sbjct: 3   MGNSE-ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYL 61

Query: 672 LEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYR 730
           L+  ADV+  D     PL+ A       ++ ++LVK+GA VN+ +   +  TPLH A+ +
Sbjct: 62  LQHGADVHAKDKGGLVPLHNACSYG-HYEVAELLVKHGAVVNVADL--WKFTPLHEAAAK 118

Query: 731 GDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA 779
           G   +I + L++   AD T +N +  T L+      + D+   L    A
Sbjct: 119 G-KYEICKLLLQH-GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  137 bits (349), Expect = 1e-37
 Identities = 47/196 (23%), Positives = 68/196 (34%), Gaps = 39/196 (19%)

Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVKH--IDINSENDLGKTPIYFAIKNNHLEI 505
           GA   +   +    L  A   G++  V  L     ++         TP++FA   N + +
Sbjct: 1   GAMGNS---EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 506 FNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAI 563
              LL+ GADV  K K     LH AC +   E+   L+ H G  VN+ D    TPLH A 
Sbjct: 58  VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKH-GAVVNVADLWKFTPLHEAA 116

Query: 564 VGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLH 623
              + E+   L+   AD                                 +N  G TPL 
Sbjct: 117 AKGKYEICKLLLQHGADP------------------------------TKKNRDGNTPLD 146

Query: 624 VAVSHGCLEAVKFLLN 639
           +    G  +    L  
Sbjct: 147 LV-KDGDTDIQDLLRG 161

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  134 bits (339), Expect = 2e-36
 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 8/171 (4%)

Query: 708 GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN 767
           GA  N   +       L  A+  G   +  + L    + +         T L+FAA  N 
Sbjct: 1   GAMGNSEAD-----RQLLEAAKAG-DVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNR 54

Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
           + ++++LL+ GAD    D     PL ++C  G YE+ + L+++ A  N+       T LH
Sbjct: 55  VSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD-LWKFTPLH 113

Query: 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878
            AA   + +I KLLL++ AD   +++ G        +  + DI   L    
Sbjct: 114 EAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGDTDIQDLLRGDA 163

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  132 bits (335), Expect = 9e-36
 Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 20/175 (11%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSD 270
           S+  + L  A +    +  K L     V    ++               TPLH A   + 
Sbjct: 6   SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEG-----------RQSTPLHFAAGYNR 54

Query: 271 IELVKLLLEKGANPLAI-EKSRN-RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGL 328
           + +V+ LL+ GA+   +  K +     LH A      ++ +LL  +GA   VNV ++   
Sbjct: 55  VSVVEYLLQHGAD---VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV--VNVADLWKF 109

Query: 329 TPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG 383
           TPLH A  +   EI K+LL  GAD    N DG TPL         ++ + L    
Sbjct: 110 TPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGDTDIQDLLRGDA 163

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  125 bits (318), Expect = 2e-33
 Identities = 46/200 (23%), Positives = 71/200 (35%), Gaps = 39/200 (19%)

Query: 513 GADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNL--QDNKGCTPLHCAIVGNQLEV 570
           GA    +       L  A +   +E V  L +   VN    + +  TPLH A   N++ V
Sbjct: 1   GAMGNSE---ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 571 FNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGC 630
             +L+   AD+                              + ++  G  PLH A S+G 
Sbjct: 58  VEYLLQHGADV------------------------------HAKDKGGLVPLHNACSYGH 87

Query: 631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLY 689
            E  + L+      VN       T L  A    + ++ ++LL+  AD    +    TPL 
Sbjct: 88  YEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLD 146

Query: 690 TALMKDPSLDIIKMLVKYGA 709
               KD   DI  +L    A
Sbjct: 147 LV--KDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 90.5 bits (226), Expect = 3e-21
 Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)

Query: 778 GADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYN-ADTNLRTIKHGSTALHTAAFHNQLD 836
           GA  +    +    LL + + G  E V  L      +         ST LH AA +N++ 
Sbjct: 1   GAMGNS---EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-GRQSTPLHFAAGYNRVS 56

Query: 837 IIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           +++ LL++ AD++A+DK G +  H+AC   ++++   L+  G+ +  A  ++ T
Sbjct: 57  VVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT 110

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 63.6 bits (156), Expect = 8e-12
 Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 15/104 (14%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDK-GVPLNYSRRIIETDTPLHSAILNSDIE 272
           G   L  A      ++A+LLV  G  +N+ D                TPLH A      E
Sbjct: 75  GLVPLHNACSYGHYEVAELLVKHGAVVNVADLWK------------FTPLHEAAAKGKYE 122

Query: 273 LVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGA 316
           + KLLL+ GA+P    +  N T L +       DI  LL    A
Sbjct: 123 ICKLLLQHGADPTKKNRDGN-TPLDLVKD-GDTDIQDLLRGDAA 164

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  150 bits (380), Expect = 1e-39
 Identities = 49/399 (12%), Positives = 133/399 (33%), Gaps = 50/399 (12%)

Query: 166 VTVSDKKETSKNPQSSDSNSDKALEEEL-TNIFKKFDLLEHPEYLSHSQGYKALCWALQE 224
           +T+ + +    +PQ       + +   L  N+F+ F        ++    YK        
Sbjct: 4   LTIHNIENYENDPQL------RLIPWILWENLFQHFISANELSLMT--LSYKEAIHIFLP 55

Query: 225 KKTDI---AKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSD---IELVKLLL 278
              ++    +LL       N   K +  +  ++ I+++     A +      ++ + LLL
Sbjct: 56  GTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLL 115

Query: 279 EKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRK 338
                   I+   N  A  +AA    + ++  L +    + + +          +A    
Sbjct: 116 TSDEIVKVIQA-ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENG 174

Query: 339 CLEIVKILLDKGADINSGN---DDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTA 395
            L ++  L +      +     ++     + A+ +    V N+L++    L+       A
Sbjct: 175 HLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA------YA 228

Query: 396 LHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKL 455
                ++G   +  ++ +H+N     K+            ++ +    ++     ++   
Sbjct: 229 EIHEFEYGEKYVNPFIARHVNRL---KEMHDAFK-----LSNPDGVFDLVTKSECLQ--- 277

Query: 456 MDGTTALHLACYFGN---LAMVNYLV------KHIDINSENDLGKTPIYFAIKNNHLEIF 506
             G   L       +   L  + +L+            +        +  A++  +    
Sbjct: 278 --GFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGAC 335

Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
            LLL + + +A+   +N+   ++      +++ +  L H
Sbjct: 336 ALLLSIPSVLALTKANNY---YINETGGRLDLRAVALEH 371

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  141 bits (357), Expect = 1e-36
 Identities = 52/360 (14%), Positives = 105/360 (29%), Gaps = 40/360 (11%)

Query: 368 IAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTP 427
           +  +  E  +  +    ++     E+    +   + +       L         K     
Sbjct: 42  MTLSYKEAIHIFLPGTKNM-----EQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVIC 96

Query: 428 LTCSIKGQAS-LEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH---IDI 483
              +I G +S L+    ++ +   +K    +   A  LA   G+L ++N L +      +
Sbjct: 97  FVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM 156

Query: 484 NSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKM--KSNFTCLHVAC-EFASIEMVS 540
                        A +N HL + N L +L    A  M    N+     A        +++
Sbjct: 157 AMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 216

Query: 541 FLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNM 599
           FLL   + +   +                 V   +      +          L+   G  
Sbjct: 217 FLLDCPVMLAYAEIHEFEYGE-------KYVNPFIARHVNRLKE--MHDAFKLSNPDGVF 267

Query: 600 DMITYAMKYFDVNIENDIGETPLHVAVSHGC---LEAVKFLLNTKNI----DVNHKTKDG 652
           D++T          E   G   L   +       L+ ++FLL+   I           D 
Sbjct: 268 DLVT--------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDA 319

Query: 653 STALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVN 712
           +  L  A          +LL   + + L        Y        LD+  + +++    +
Sbjct: 320 NELLRLALRLGNQGACALLLSIPSVLALTKA--NNYYINE-TGGRLDLRAVALEHHHHHH 376

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  130 bits (327), Expect = 1e-32
 Identities = 45/357 (12%), Positives = 96/357 (26%), Gaps = 46/357 (12%)

Query: 402 FGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTA 461
               E ++  L     N +       L  +   + + +++    + G   +        A
Sbjct: 44  LSYKEAIHIFLPGTK-NMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICF---VA 99

Query: 462 LHLACYFGNLAMVNYLV-KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKM 520
               C    L  +  L+     +             A +N HL + N L +L     + M
Sbjct: 100 AITGC-SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM 158

Query: 521 KS--NFTCLHVACEFASIEMVSFLLSH----IGVNLQDNKGCTPLHCAIVGNQLEVFNHL 574
               N+    +A E   + +++ L           +Q          A+      V N L
Sbjct: 159 IQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 218

Query: 575 INSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAV 634
           ++    +               G   +  +  ++ +   E         ++   G  + V
Sbjct: 219 LDCPVML-----AYAEIHEFEYGEKYVNPFIARHVNRLKEMH---DAFKLSNPDGVFDLV 270

Query: 635 KFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL--------LEANADVNLGDGT-Y 685
                        +   G   L          L++ +        ++A A      G   
Sbjct: 271 T----------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDAN 320

Query: 686 TPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE 742
             L  AL    +     +L+   + + LT          +     G   D+    +E
Sbjct: 321 ELLRLALRLG-NQGACALLLSIPSVLALTKA-----NNYYINETGGRL-DLRAVALE 370

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  128 bits (323), Expect = 4e-32
 Identities = 42/332 (12%), Positives = 84/332 (25%), Gaps = 43/332 (12%)

Query: 569 EVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSH 628
           E  +  +    ++   +    L L  A  N +            I+++       VA   
Sbjct: 48  EAIHIFLPGTKNME--QVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSE---VICFVAAIT 102

Query: 629 GC---LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT- 684
           GC   L+ +  LL   +  V     +   A   A  +  L ++  L E      +     
Sbjct: 103 GCSSALDTLCLLLT-SDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA 161

Query: 685 --YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE 742
             Y     A      L ++  L +                   +A+     +++  FL+ 
Sbjct: 162 ENYHAFRLAAENG-HLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLL- 219

Query: 743 ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYE 802
           +C   +         A           +  F+ +       +          S   G+++
Sbjct: 220 DCPVMLA-------YAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFD 268

Query: 803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL--------LKYNADINAEDKY 854
           +V                 G   L      N   ++  +        +K  A        
Sbjct: 269 LVTKS----------ECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGD 318

Query: 855 GKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886
                  A +  N      LL   S +     
Sbjct: 319 ANELLRLALRLGNQGACALLLSIPSVLALTKA 350

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  114 bits (286), Expect = 2e-27
 Identities = 45/342 (13%), Positives = 100/342 (29%), Gaps = 38/342 (11%)

Query: 532 EFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLH 591
             +  E +   L     N++  +    L+ A            + S+A     K++    
Sbjct: 43  TLSYKEAIHIFLPG-TKNMEQVRQLLCLYYA----HYNRNAKQLWSDAHKKGIKSEVICF 97

Query: 592 LACATGNMDMITYAMKYF-----DVNIENDIGETPLHVAVSHGCLEAVKFLLNTK-NIDV 645
           +A  TG    +   +         V +          +A  +G L  +  L        +
Sbjct: 98  VAAITGCSSALDT-LCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM 156

Query: 646 NHKTKDGSTALFFACYDKRLDLVEILLEANADVNL----GDGTYTPLYTALMKDPSLDII 701
                +   A   A  +  L ++  L E            +  Y   + A+ +    ++I
Sbjct: 157 AMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG-HHNVI 215

Query: 702 KMLVKYGADVNLTNEACYYMTPLHYASYRG-------DCNDIARFLVEECNADITLRN-- 752
             L+     +       +     +   +         + +D  +    +   D+  ++  
Sbjct: 216 NFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSEC 275

Query: 753 FNNRTALNFAAFGNN---LDLLKFL-----LKAGADPDILDLKDTSPLLSSCRQGLYEIV 804
                 L      N+   LD ++FL     +KA A    +       L  + R G     
Sbjct: 276 LQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGAC 335

Query: 805 DTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
             LL   +   L      +   +      +LD+  + L+++ 
Sbjct: 336 ALLLSIPSVLALTK----ANNYYINETGGRLDLRAVALEHHH 373

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 90.4 bits (224), Expect = 2e-19
 Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 13/202 (6%)

Query: 690 TALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADIT 749
            +LM     + I + +    ++    E    +  L+YA Y    N  A+ L  + +    
Sbjct: 39  LSLMTLSYKEAIHIFLPGTKNM----EQVRQLLCLYYAHY----NRNAKQLWSDAHKKGI 90

Query: 750 LRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLE 809
                   A       + LD L  LL +     ++  ++      +   G   +++ L E
Sbjct: 91  KSEVICFVAA-ITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 149

Query: 810 YNADTNLRTIK-HGSTALHTAAFHNQLDIIKLLLKYNADINAED--KYGKIAFHSACQAK 866
                 +  I+     A   AA +  L ++  L +                AF  A   +
Sbjct: 150 LAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 209

Query: 867 N-WDIVTFLLDAGSNIEKATKY 887
              +++ FLLD    +  A  +
Sbjct: 210 GHHNVINFLLDCPVMLAYAEIH 231

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 50.7 bits (121), Expect = 1e-06
 Identities = 17/153 (11%), Positives = 44/153 (28%), Gaps = 23/153 (15%)

Query: 216 KALCWALQEKKTDIAKLLVDKGVPLNLVDKGV---PLNYSRRIIETD------TPLHSAI 266
            A     +  +  +   +      L  +         +    ++           L + I
Sbjct: 227 YAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLI 286

Query: 267 LNSD---IELVKLL-----LEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK 318
             +D   ++ ++ L     ++  A    I    N   L +A  + +     LL    +  
Sbjct: 287 RRNDEVLLDDIRFLLSIPGIKALAPTATIPGDAN-ELLRLALRLGNQGACALLLSIPSVL 345

Query: 319 SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
           ++   N       +I      L++  + L+   
Sbjct: 346 ALTKAN-----NYYINETGGRLDLRAVALEHHH 373

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  145 bits (368), Expect = 3e-39
 Identities = 49/270 (18%), Positives = 89/270 (32%), Gaps = 58/270 (21%)

Query: 260 TPLHSAILNSDIE----LVKLLLEKGANPLAIEKSRN---RTALHVAAIVES---VDIVK 309
             L   +     +    L+  LL         E       +T L  A +  S    D + 
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIP 66

Query: 310 LLFDYGAEK---------SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDG 360
           +L D   +                  G T LHIA  R+C   V++L++KGAD++      
Sbjct: 67  ILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH------ 120

Query: 361 CTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH----IN 416
                   AQ     F      G       GE   L +A+      +V+YL ++     +
Sbjct: 121 --------AQARGRFFQPKDEGGYFY---FGE-LPLSLAACTNQPHIVHYLTENGHKQAD 168

Query: 417 INHQDKDGWTPLTCSIKGQ--------ASLEVFHSIIEAGADIKAKLM-------DGTTA 461
           +  QD  G T L   +              +++  ++   A +            DG + 
Sbjct: 169 LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSP 228

Query: 462 LHLACYFGNLAMVNYLVKH--IDINSENDL 489
           L +A   G + +  ++++    D  + +  
Sbjct: 229 LMMAAKTGKIGIFQHIIRREIADAAAHHHH 258

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  117 bits (295), Expect = 1e-29
 Identities = 50/284 (17%), Positives = 93/284 (32%), Gaps = 60/284 (21%)

Query: 393 RTALHMASQFGNLE----MVNYLLKH-ININHQD----KDGWTPLTCSIKGQASLEVFHS 443
           R  L      G+ +    ++++LL H   +  ++      G T L               
Sbjct: 6   RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCL-------------P- 51

Query: 444 IIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHL 503
             +A  ++ A   D T  + L        M  ++  +         G+T ++ AI+    
Sbjct: 52  --KALLNLSAGRND-TIPILLDIAEKTGNMREFI--NSPFRDVYYRGQTALHIAIERRCK 106

Query: 504 EIFNLLLKLGADVAVKMKSNF--------------TCLHVACEFASIEMVSFLLSHIG-- 547
               LL++ GADV  + +  F                L +A       +V +L  +    
Sbjct: 107 HYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166

Query: 548 --VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYA 605
             +  QD++G T LH  +        N   N+     MY     L + CA          
Sbjct: 167 ADLRRQDSRGNTVLHALVAIAD----NTRENTKFVTKMYDL---LLIKCAKLF------- 212

Query: 606 MKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKT 649
                  + N+ G +PL +A   G +   + ++  +  D     
Sbjct: 213 PDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAAHH 256

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  115 bits (290), Expect = 8e-29
 Identities = 45/242 (18%), Positives = 78/242 (32%), Gaps = 46/242 (19%)

Query: 207 EYLSHSQGYKALCWAL---QEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLH 263
           E+   S G   L  AL      + D   +L+D       + + +   +        T LH
Sbjct: 39  EFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALH 98

Query: 264 SAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQ 323
            AI       V+LL+EKGA+  A  + R                      +   K     
Sbjct: 99  IAIERRCKHYVELLVEKGADVHAQARGR----------------------FFQPKDEGGY 136

Query: 324 NVAGLTPLHIACRRKCLEIVKILLDKG---ADINSGNDDGCTPLFCAIA---------QN 371
              G  PL +A       IV  L + G   AD+   +  G T L   +A         + 
Sbjct: 137 FYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKF 196

Query: 372 CLEVFNYLVNHGCDLSVPEGE--------RTALHMASQFGNLEMVNYLLKH-ININHQDK 422
             ++++ L+     L               + L MA++ G + +  ++++  I       
Sbjct: 197 VTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAAHH 256

Query: 423 DG 424
             
Sbjct: 257 HH 258

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  109 bits (275), Expect = 7e-27
 Identities = 47/300 (15%), Positives = 89/300 (29%), Gaps = 76/300 (25%)

Query: 586 NDSPLHLACATGNMDMITYAMKYF-----DVN----IENDIGETPLHVAV---SHGCLEA 633
           N   L    + G+ D +   + +       +      E   G+T L  A+   S G  + 
Sbjct: 5   NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDT 64

Query: 634 VKFLLN----------TKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG 683
           +  LL+            N         G TAL  A   +    VE+L+E  ADV+    
Sbjct: 65  IPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH---- 120

Query: 684 TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE- 742
                             +   ++    +      +   PL  A+       I  +L E 
Sbjct: 121 -----------------AQARGRFFQPKDEGGYFYFGELPLSLAACTNQP-HIVHYLTEN 162

Query: 743 -ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLY 801
               AD+  ++    T L+      +                 + ++ +  +        
Sbjct: 163 GHKQADLRRQDSRGNTVLHALVAIAD-----------------NTRENTKFV-------T 198

Query: 802 EIVDTLLEYNADTNLRTI------KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
           ++ D LL   A     T         G + L  AA   ++ I + +++      A   + 
Sbjct: 199 KMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAAHHHH 258

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 99.9 bits (249), Expect = 2e-23
 Identities = 38/253 (15%), Positives = 66/253 (26%), Gaps = 51/253 (20%)

Query: 686 TPLYTALMKDPS---LDIIKMLVKYGADVNLTNEACYYM--TPLHYASY--RGDCNDIAR 738
             L+  + +        ++  L+ +   +            T L  A        ND   
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIP 66

Query: 739 FLV----------EECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKD 788
            L+          E  N+      +  +TAL+ A        ++ L++ GAD        
Sbjct: 67  ILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR 126

Query: 789 TS--------------PLLSSCRQGLYEIVDTLLE---YNADTNLRTIKHGSTALHTAAF 831
                           PL  +       IV  L E     AD   +    G+T LH    
Sbjct: 127 FFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQD-SRGNTVLHALVA 185

Query: 832 HN---------QLDIIKLLLKYNADINAE-------DKYGKIAFHSACQAKNWDIVTFLL 875
                         +  LLL   A +  +       +  G      A +     I   ++
Sbjct: 186 IADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHII 245

Query: 876 DAGSNIEKATKYR 888
                   A  + 
Sbjct: 246 RREIADAAAHHHH 258

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 80.6 bits (199), Expect = 7e-17
 Identities = 33/178 (18%), Positives = 61/178 (34%), Gaps = 37/178 (20%)

Query: 750 LRNFNNRTALNFAAFGNN---LDLLKFLLKAGADPDILDLKDTS----PL---LSSCRQG 799
           ++ FN     +  + G+      LL FLL         + ++ S     L   L +   G
Sbjct: 1   MKVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAG 60

Query: 800 LYEIVDTLLEYNADTNLRTI----------KHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
             + +  LL+    T                 G TALH A        ++LL++  AD++
Sbjct: 61  RNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH 120

Query: 850 AEDK--------------YGKIAFHSACQAKNWDIVTFLLDAGS---NIEKATKYRMT 890
           A+ +              +G++    A       IV +L + G    ++ +      T
Sbjct: 121 AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNT 178

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  137 bits (347), Expect = 7e-38
 Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 9/140 (6%)

Query: 315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE 374
                +++   +    L  A  R  +E V+ LL+ GAD N+ N  G  P+         +
Sbjct: 2   SPG--IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVM-MMGSAQ 58

Query: 375 VFNYLVNHGCDLSV--PEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC- 430
           V   L+ HG + +   P      +H A++ G L+ +  L +    ++  D  G  P+   
Sbjct: 59  VAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLA 118

Query: 431 SIKGQASLEVFHSIIEAGAD 450
             +G    ++   +  A  D
Sbjct: 119 EEQG--HRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  128 bits (325), Expect = 7e-35
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 5/128 (3%)

Query: 259 DTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK 318
           D  L +A     +E V+ LLE GA+P A+ +   R  + V  +  S  + +LL  +GAE 
Sbjct: 13  DAGLATAAARGQVETVRQLLEAGADPNALNRF-GRRPIQVMMM-GSAQVAELLLLHGAE- 69

Query: 319 SVNVQNVAGLT-PLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFN 377
             N  + A LT P+H A R   L+ + +L   GA ++  +  G  P+  A  Q   ++  
Sbjct: 70  -PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIAR 128

Query: 378 YLVNHGCD 385
           YL     D
Sbjct: 129 YLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  125 bits (316), Expect = 1e-33
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 5/127 (3%)

Query: 290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDK 349
             +   L  AA    V+ V+ L + GA+   N  N  G  P+ +       ++ ++LL  
Sbjct: 10  GSSDAGLATAAARGQVETVRQLLEAGAD--PNALNRFGRRPIQVMM-MGSAQVAELLLLH 66

Query: 350 GADINSGNDDGCT-PLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEM 407
           GA+ N  +    T P+  A  +  L+    L   G  L V +   R  + +A + G+ ++
Sbjct: 67  GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDI 126

Query: 408 VNYLLKH 414
             YL   
Sbjct: 127 ARYLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  124 bits (315), Expect = 2e-33
 Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 6/138 (4%)

Query: 447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEI 505
               I          L  A   G +  V  L++   D N+ N  G+ PI   +     ++
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQV 59

Query: 506 FNLLLKLGADVAVKMKSNFTC-LHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCA 562
             LLL  GA+      +  T  +H A     ++ +  L    G  +++ D  G  P+  A
Sbjct: 60  AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLA 118

Query: 563 IVGNQLEVFNHLINSNAD 580
                 ++  +L  +  D
Sbjct: 119 EEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  123 bits (312), Expect = 4e-33
 Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 8/135 (5%)

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
            +++     +  L  A + G +E V+ LL     D N   + G   +          + E
Sbjct: 4   GIHMLGGSSDAGLATAAARGQVETVRQLLE-AGADPNALNRFGRRPIQVMMMG-SAQVAE 61

Query: 670 ILLEANADVNLGD--GTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYA 727
           +LL   A+ N  D      P++ A  +   LD + +L + GA +++ +   +   P+  A
Sbjct: 62  LLLLHGAEPNCADPATLTRPVHDAAREG-FLDTLVVLHRAGARLDVCDA--WGRLPVDLA 118

Query: 728 SYRGDCNDIARFLVE 742
             +G   DIAR+L  
Sbjct: 119 EEQGHR-DIARYLHA 132

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  122 bits (308), Expect = 1e-32
 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIK 702
            ++         L  A    +++ V  LLEA AD N  +     P+   +M   S  + +
Sbjct: 4   GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMG--SAQVAE 61

Query: 703 MLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFA 762
           +L+ +GA+ N  + A     P+H A+  G   D    L     A + + +   R  ++ A
Sbjct: 62  LLLLHGAEPNCADPA-TLTRPVHDAAREG-FLDTLVVLHRA-GARLDVCDAWGRLPVDLA 118

Query: 763 AFGNNLDLLKFLLKAGAD 780
               + D+ ++L  A  D
Sbjct: 119 EEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  120 bits (304), Expect = 4e-32
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 1/136 (0%)

Query: 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIV 804
           +  I +   ++   L  AA    ++ ++ LL+AGADP+ L+     P+      G  ++ 
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVA 60

Query: 805 DTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQ 864
           + LL + A+ N       +  +H AA    LD + +L +  A ++  D +G++    A +
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120

Query: 865 AKNWDIVTFLLDAGSN 880
             + DI  +L  A  +
Sbjct: 121 QGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  115 bits (291), Expect = 3e-30
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 6/133 (4%)

Query: 416 NINHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMV 474
            I+         L   + +GQ  +E    ++EAGAD  A    G   + +    G+  + 
Sbjct: 4   GIHMLGGSSDAGLATAAARGQ--VETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVA 60

Query: 475 NYLVKH-IDINSENDLGKT-PIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACE 532
             L+ H  + N  +    T P++ A +   L+   +L + GA + V        + +A E
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120

Query: 533 FASIEMVSFLLSH 545
               ++  +L + 
Sbjct: 121 QGHRDIARYLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  112 bits (282), Expect = 4e-29
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 14/139 (10%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
               L  A    + +  + L++ G   N +++               P+   ++ S  ++
Sbjct: 12  SDAGLATAAARGQVETVRQLLEAGADPNALNR-----------FGRRPIQVMMMGS-AQV 59

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
            +LLL  GA P   + +     +H AA    +D + +L   GA   ++V +  G  P+ +
Sbjct: 60  AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR--LDVCDAWGRLPVDL 117

Query: 334 ACRRKCLEIVKILLDKGAD 352
           A  +   +I + L     D
Sbjct: 118 AEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  109 bits (276), Expect = 3e-28
 Identities = 30/165 (18%), Positives = 50/165 (30%), Gaps = 35/165 (21%)

Query: 548 VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMK 607
           +++        L  A    Q+E    L+ + A                            
Sbjct: 5   IHMLGGSSDAGLATAAARGQVETVRQLLEAGA---------------------------- 36

Query: 608 YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGST-ALFFACYDKRLD 666
             D N  N  G  P+ V    G  +  + LL     + N       T  +  A  +  LD
Sbjct: 37  --DPNALNRFGRRPIQVM-MMGSAQVAELLLL-HGAEPNCADPATLTRPVHDAAREGFLD 92

Query: 667 LVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGAD 710
            + +L  A A +++ D     P+  A  +    DI + L     D
Sbjct: 93  TLVVLHRAGARLDVCDAWGRLPVDLAEEQG-HRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 96.4 bits (241), Expect = 2e-23
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 3/115 (2%)

Query: 777 AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLD 836
                 +L     + L ++  +G  E V  LLE  AD N    + G   +          
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALN-RFGRRPIQVMM-MGSAQ 58

Query: 837 IIKLLLKYNADINAEDKYGK-IAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           + +LLL + A+ N  D        H A +    D +  L  AG+ ++    +   
Sbjct: 59  VAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRL 113

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  135 bits (343), Expect = 2e-37
 Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 7/126 (5%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAE 317
           TPLH A  N  +E+VKLLLE GA+   +       RT LH+AA    +++VKLL + GA+
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 318 KSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFN 377
             VN ++  G TPLH+A R   LE+VK+LL+ GAD+N+ + +G TPL  A     LEV  
Sbjct: 61  --VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVK 118

Query: 378 YLVNHG 383
            L+  G
Sbjct: 119 LLLEAG 124

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  134 bits (340), Expect = 4e-37
 Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 36/156 (23%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
           G TPLH+A R   LE+VK+LL+ GAD+N+ + +G TP                       
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP----------------------- 38

Query: 387 SVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSI 444
                    LH+A++ G+LE+V  LL+   ++N +DK+G TPL   +  G   LEV   +
Sbjct: 39  ---------LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG--HLEVVKLL 87

Query: 445 IEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH 480
           +EAGAD+ AK  +G T LHLA   G+L +V  L++ 
Sbjct: 88  LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  132 bits (336), Expect = 2e-36
 Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 3/123 (2%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
           RT LH+AA    +++VKLL + GA+  VN ++  G TPLH+A R   LE+VK+LL+ GAD
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 353 INSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYL 411
           +N+ + +G TPL  A     LEV   L+  G D++   +  RT LH+A++ G+LE+V  L
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120

Query: 412 LKH 414
           L+ 
Sbjct: 121 LEA 123

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  122 bits (309), Expect = 8e-33
 Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 2/125 (1%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           +G T LHLA   G+L +V  L++   D+N+++  G+TP++ A +N HLE+  LLL+ GAD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHL 574
           V  K K+  T LH+A     +E+V  LL     VN +D  G TPLH A     LEV   L
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120

Query: 575 INSNA 579
           + + A
Sbjct: 121 LEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  119 bits (302), Expect = 6e-32
 Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 34/154 (22%)

Query: 393 RTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIK 452
           RT LH+A++ G+LE+V  LL+                                  GAD+ 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEA---------------------------------GADVN 29

Query: 453 AKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
           AK  +G T LHLA   G+L +V  L++   D+N+++  G+TP++ A +N HLE+  LLL+
Sbjct: 30  AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89

Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
            GADV  K K+  T LH+A     +E+V  LL  
Sbjct: 90  AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  114 bits (289), Expect = 3e-30
 Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 6/126 (4%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
           G TPLH+A  +G LE VK LL     DVN K K+G T L  A  +  L++V++LLEA AD
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 678 VNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI 736
           VN  D    TPL+ A      L+++K+L++ GADVN  ++     TPLH A+  G   ++
Sbjct: 61  VNAKDKNGRTPLHLAARNG-HLEVVKLLLEAGADVNAKDK--NGRTPLHLAARNG-HLEV 116

Query: 737 ARFLVE 742
            + L+E
Sbjct: 117 VKLLLE 122

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  110 bits (278), Expect = 1e-28
 Identities = 59/187 (31%), Positives = 79/187 (42%), Gaps = 63/187 (33%)

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVN 549
           G+TP++ A +N HLE+  LLL+ GADV                                N
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADV--------------------------------N 29

Query: 550 LQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYF 609
            +D  G TPLH A     LEV   L+ + AD+                            
Sbjct: 30  AKDKNGRTPLHLAARNGHLEVVKLLLEAGADV---------------------------- 61

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
             N ++  G TPLH+A  +G LE VK LL     DVN K K+G T L  A  +  L++V+
Sbjct: 62  --NAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVK 118

Query: 670 ILLEANA 676
           +LLEA A
Sbjct: 119 LLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  110 bits (277), Expect = 1e-28
 Identities = 53/125 (42%), Positives = 78/125 (62%), Gaps = 1/125 (0%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
           N RT L+ AA   +L+++K LL+AGAD +  D    +PL  + R G  E+V  LLE  AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
            N +  K+G T LH AA +  L+++KLLL+  AD+NA+DK G+   H A +  + ++V  
Sbjct: 61  VNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 119

Query: 874 LLDAG 878
           LL+AG
Sbjct: 120 LLEAG 124

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  108 bits (274), Expect = 4e-28
 Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 18/140 (12%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G   L  A +    ++ KLL++ G  +N  DK              TPLH A  N  +E+
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-----------NGRTPLHLAARNGHLEV 50

Query: 274 VKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           VKLLLE GA+   +       RT LH+AA    +++VKLL + GA+  VN ++  G TPL
Sbjct: 51  VKLLLEAGAD---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPL 105

Query: 332 HIACRRKCLEIVKILLDKGA 351
           H+A R   LE+VK+LL+ GA
Sbjct: 106 HLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  107 bits (269), Expect = 2e-27
 Identities = 56/157 (35%), Positives = 76/157 (48%), Gaps = 35/157 (22%)

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIE 614
           G TPLH A     LEV   L+ + AD+                              N +
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADV------------------------------NAK 31

Query: 615 NDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
           +  G TPLH+A  +G LE VK LL     DVN K K+G T L  A  +  L++V++LLEA
Sbjct: 32  DKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90

Query: 675 NADVNLGD--GTYTPLYTALMKDPSLDIIKMLVKYGA 709
            ADVN  D  G  TPL+ A      L+++K+L++ GA
Sbjct: 91  GADVNAKDKNG-RTPLHLAARNG-HLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  106 bits (267), Expect = 3e-27
 Identities = 50/130 (38%), Positives = 79/130 (60%), Gaps = 6/130 (4%)

Query: 651 DGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGA 709
           +G T L  A  +  L++V++LLEA ADVN  D    TPL+ A      L+++K+L++ GA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG-HLEVVKLLLEAGA 59

Query: 710 DVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLD 769
           DVN  ++     TPLH A+  G   ++ + L+E   AD+  ++ N RT L+ AA   +L+
Sbjct: 60  DVNAKDK--NGRTPLHLAARNG-HLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLE 115

Query: 770 LLKFLLKAGA 779
           ++K LL+AGA
Sbjct: 116 VVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 78.9 bits (196), Expect = 1e-17
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
           +G T LH AA +  L+++KLLL+  AD+NA+DK G+   H A +  + ++V  LL+AG++
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 881 IEKATKYRMT 890
           +    K   T
Sbjct: 61  VNAKDKNGRT 70

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  134 bits (340), Expect = 6e-37
 Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 5/139 (3%)

Query: 281 GANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCL 340
           G +P      R  T LH+A+I   +  V+ L   G++   NV++ AG TPLH AC    L
Sbjct: 1   GIDPFT--NHRGETLLHIASIKGDIPSVEYLLQNGSD--PNVKDHAGWTPLHEACNHGHL 56

Query: 341 EIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMA 399
           ++V++LL   A +N+      +PL  A     +++   L+++G   +         +   
Sbjct: 57  KVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYT 116

Query: 400 SQFGNLEMVNYLLKHININ 418
                  ++    K+ + +
Sbjct: 117 DDESMKSLLLLPEKNESSS 135

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  128 bits (325), Expect = 7e-35
 Identities = 38/192 (19%), Positives = 60/192 (31%), Gaps = 66/192 (34%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
           G T LHIA  +  +  V+ LL  G+D N  +  G TPL                      
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPL---------------------- 47

Query: 387 SVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIE 446
                     H A   G+L++V  LL+H                                
Sbjct: 48  ----------HEACNHGHLKVVELLLQH-------------------------------- 65

Query: 447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEI 505
             A +        + LH A   G++ +V  L+ +    N+ N  G  P+ +    +   +
Sbjct: 66  -KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSL 124

Query: 506 FNLLLKLGADVA 517
             L  K  +  A
Sbjct: 125 LLLPEKNESSSA 136

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  121 bits (306), Expect = 2e-32
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)

Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIF 506
           G D       G T LH+A   G++  V YL+++  D N ++  G TP++ A  + HL++ 
Sbjct: 1   GIDPFTN-HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIV 564
            LLL+  A V      N + LH A +   +++V  LLS+ G   N  +  G  P+     
Sbjct: 60  ELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDD 118

Query: 565 GNQLEVFNHLINSNADIT 582
            +   +       N   +
Sbjct: 119 ESMKSLLLLPE-KNESSS 135

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  117 bits (295), Expect = 8e-31
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 2/135 (1%)

Query: 746 ADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVD 805
            D    N    T L+ A+   ++  +++LL+ G+DP++ D    +PL  +C  G  ++V+
Sbjct: 2   IDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60

Query: 806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQA 865
            LL++ A  N        + LH AA +  +DI+KLLL Y A  NA + +G          
Sbjct: 61  LLLQHKALVNTTG-YQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDE 119

Query: 866 KNWDIVTFLLDAGSN 880
               ++       S+
Sbjct: 120 SMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  116 bits (293), Expect = 1e-30
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 9/141 (6%)

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           D    +  GET LH+A   G + +V++LL     D N K   G T L  AC    L +VE
Sbjct: 3   DPFTNHR-GETLLHIASIKGDIPSVEYLLQ-NGSDPNVKDHAGWTPLHEACNHGHLKVVE 60

Query: 670 ILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYAS 728
           +LL+  A VN       +PL+ A      +DI+K+L+ YGA  N  N   + + P+ Y  
Sbjct: 61  LLLQHKALVNTTGYQNDSPLHDAAKNG-HVDIVKLLLSYGASRNAVNI--FGLRPVDYTD 117

Query: 729 YRGDCNDIARFLVEECNADIT 749
                  +     +  N   +
Sbjct: 118 DES-MKSLLLLPEK--NESSS 135

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  112 bits (283), Expect = 3e-29
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 7/143 (4%)

Query: 708 GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN 767
           G D   TN      T LH AS +GD      +L++   +D  +++    T L+ A    +
Sbjct: 1   GIDPF-TNH--RGETLLHIASIKGD-IPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGH 55

Query: 768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827
           L +++ LL+  A  +    ++ SPL  + + G  +IV  LL Y A  N      G   + 
Sbjct: 56  LKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVN-IFGLRPVD 114

Query: 828 TAAFHNQLDIIKLLLKYNADINA 850
                +   ++ L  K N   +A
Sbjct: 115 YTDDESMKSLLLLPEK-NESSSA 136

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  112 bits (282), Expect = 4e-29
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 5/133 (3%)

Query: 415 ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAM 473
           I+    +  G T L   SIKG   +     +++ G+D   K   G T LH AC  G+L +
Sbjct: 2   IDPF-TNHRGETLLHIASIKG--DIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKV 58

Query: 474 VNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACE 532
           V  L++H   +N+      +P++ A KN H++I  LLL  GA            +    +
Sbjct: 59  VELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD 118

Query: 533 FASIEMVSFLLSH 545
            +   ++     +
Sbjct: 119 ESMKSLLLLPEKN 131

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  100 bits (253), Expect = 4e-25
 Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 15/142 (10%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G   L  A  +      + L+  G   N+ D               TPLH A  +  +++
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAG-----------WTPLHEACNHGHLKV 58

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHI 333
           V+LLL+  A         N + LH AA    VDIVKLL  YGA  S N  N+ GL P+  
Sbjct: 59  VELLLQHKALVNTTGYQ-NDSPLHDAAKNGHVDIVKLLLSYGA--SRNAVNIFGLRPVDY 115

Query: 334 ACRRKCLEIVKILLDKGADINS 355
                   ++  L +K    ++
Sbjct: 116 TDDESMKSLLL-LPEKNESSSA 136

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 80.9 bits (201), Expect = 4e-18
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 812 ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV 871
            D    T   G T LH A+    +  ++ LL+  +D N +D  G    H AC   +  +V
Sbjct: 2   IDPF--TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 872 TFLLDAGSNIEKATKYRMT 890
             LL   + +        +
Sbjct: 60  ELLLQHKALVNTTGYQNDS 78

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  132 bits (335), Expect = 1e-35
 Identities = 31/181 (17%), Positives = 53/181 (29%), Gaps = 19/181 (10%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAE 317
             + +A +    E    L EKG          N     L          I   L + GA+
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD 67

Query: 318 KSVNVQNVAGLTPLHIACRR------KCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN 371
             +  +   G T      +          E+ KI L+KGADI +        +F  I   
Sbjct: 68  --IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNY 125

Query: 372 CLEVFN-------YLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKH-ININHQDK 422
            ++               G  L + +    TAL    +      +  +  +    N ++ 
Sbjct: 126 FVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185

Query: 423 D 423
            
Sbjct: 186 S 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  130 bits (330), Expect = 5e-35
 Identities = 31/206 (15%), Positives = 60/206 (29%), Gaps = 35/206 (16%)

Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSV-NVQNVAGLTPLHIACRRKCLEIVKILLDKG 350
               +  AA++ + +    LF+ G E     +++      L         +I   L++KG
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG 65

Query: 351 ADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNY 410
           ADI S   +G T  F        ++                           G  E+   
Sbjct: 66  ADIKSRTKEGTTLFFPLFQGGGNDI--------------------------TGTTELCKI 99

Query: 411 LLKH-ININHQDKDGWTPLTCSIKG------QASLEVFHSIIEAGADIKAKLMDGTTALH 463
            L+   +I    K     +  +I        +          ++G  +  K   G TAL 
Sbjct: 100 FLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159

Query: 464 LACYFGNLAMVNYLVKH-IDINSEND 488
                     +  +  +    N + +
Sbjct: 160 FVKRCQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  129 bits (325), Expect = 2e-34
 Identities = 23/205 (11%), Positives = 53/205 (25%), Gaps = 43/205 (20%)

Query: 329 TPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV 388
             +  A      E    L +KG +    +      L+                       
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGYEDK-ESVLKSNILY----------------------- 43

Query: 389 PEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPL-----TCSIKGQASLEVFH 442
                  L   +     ++  +L+    +I  + K+G T               + E+  
Sbjct: 44  -----DVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCK 98

Query: 443 SIIEAGADIKAKLMDGTTALHLACYFGNL------AMVNYLVKH--IDINSENDLGKTPI 494
             +E GADI A        +    +   +       +   +     + +  ++  G T +
Sbjct: 99  IFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTAL 158

Query: 495 YFAIKNNHLEIFNLLLKLGADVAVK 519
            F  +        ++        +K
Sbjct: 159 EFVKRCQKPIALKMMEDYIKKYNLK 183

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  128 bits (323), Expect = 4e-34
 Identities = 28/215 (13%), Positives = 56/215 (26%), Gaps = 40/215 (18%)

Query: 648 KTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALM---KDPSLDIIKML 704
                   +  A      +    L E   +          LY  L     +    I   L
Sbjct: 2   NAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFL 61

Query: 705 VKYGADVNLTNEACYYMTPLHYASYRG-----DCNDIARFLVEECNADITLRNFNNRTAL 759
           +  GAD+    +     T        G        ++ +  +E+  ADIT      +  +
Sbjct: 62  INKGADIKSRTK--EGTTLFFPLFQGGGNDITGTTELCKIFLEK-GADITALYKPYKIVV 118

Query: 760 NFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLL-EYNADTNLRT 818
               F   +D  +                           +  +   +  +      ++ 
Sbjct: 119 FKNIFNYFVDENE---------------------------MIPLYKLIFSQSGLQLLIKD 151

Query: 819 IKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK 853
            K G TAL       +   +K++  Y    N ++ 
Sbjct: 152 -KWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  126 bits (319), Expect = 2e-33
 Identities = 22/181 (12%), Positives = 55/181 (30%), Gaps = 15/181 (8%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNT--KNIDVNHKTKDGSTALFFACYDKRLDLVEILLEAN 675
               +  A   G  E    L     ++ +   K+      L     + R  +   L+   
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG 65

Query: 676 ADVNLGDGT-YTPLYTALMK-----DPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASY 729
           AD+        T  +            + ++ K+ ++ GAD+    +   Y   +    +
Sbjct: 66  ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYK--PYKIVVFKNIF 123

Query: 730 RG-----DCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDIL 784
                  +   + + +  +    + +++    TAL F         LK +       ++ 
Sbjct: 124 NYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLK 183

Query: 785 D 785
           +
Sbjct: 184 E 184

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  124 bits (313), Expect = 1e-32
 Identities = 26/209 (12%), Positives = 59/209 (28%), Gaps = 46/209 (22%)

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAV---KMKSNFTCLHVACEFASIEMVSFLLSH- 545
               +  A      E F  L + G +      K    +  L    + A  ++  FL++  
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG 65

Query: 546 IGVNLQDNKGCTPLHCAI------VGNQLEVFNHLINSNADITMYKNDSPLHLACATGNM 599
             +  +  +G T            +    E+    +   ADI                  
Sbjct: 66  ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI------------------ 107

Query: 600 DMITYAMKYFDVNIENDIGETPLHVAVSHGCLEA------VKFLLNTKNIDVNHKTKDGS 653
                              +  +   + +  ++        K + +   + +  K K G 
Sbjct: 108 ------------TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGL 155

Query: 654 TALFFACYDKRLDLVEILLEANADVNLGD 682
           TAL F    ++   ++++ +     NL +
Sbjct: 156 TALEFVKRCQKPIALKMMEDYIKKYNLKE 184

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  121 bits (305), Expect = 1e-31
 Identities = 22/186 (11%), Positives = 53/186 (28%), Gaps = 24/186 (12%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
            Y+ +  A      +    L +KG           + Y          L +    +  ++
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILY--------DVLRNNNDEARYKI 57

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAA------IVESVDIVKLLFDYGAEKSVNVQNVAG 327
              L+ KGA+  +  K    T            I  + ++ K+  + GA+  +       
Sbjct: 58  SMFLINKGADIKSRTKE-GTTLFFPLFQGGGNDITGTTELCKIFLEKGAD--ITALYKPY 114

Query: 328 LTPLHIACRR------KCLEIVKILLDK-GADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
              +            + + + K++  + G  +   +  G T L              + 
Sbjct: 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMME 174

Query: 381 NHGCDL 386
           ++    
Sbjct: 175 DYIKKY 180

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  110 bits (277), Expect = 7e-28
 Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 27/159 (16%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILN----- 268
            Y  L     E +  I+  L++KG  +    K           E  T             
Sbjct: 42  LYDVLRNNNDEARYKISMFLINKGADIKSRTK-----------EGTTLFFPLFQGGGNDI 90

Query: 269 -SDIELVKLLLEKGANPLAIEKSRNRTALHVAA------IVESVDIVKLLFD-YGAEKSV 320
               EL K+ LEKGA+  A+ K   +  +            E + + KL+F   G +  +
Sbjct: 91  TGTTELCKIFLEKGADITALYK-PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ--L 147

Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDD 359
            +++  GLT L    R +    +K++ D     N   + 
Sbjct: 148 LIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 79.7 bits (197), Expect = 4e-17
 Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 12/113 (10%)

Query: 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHN----QLDIIKLLLK 843
           +   + ++   G YE    L E   +         S  L+    +N    +  I   L+ 
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKES--VLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 844 YNADINAEDKYGKIAFHSACQAKNWDIVT------FLLDAGSNIEKATKYRMT 890
             ADI +  K G   F    Q    DI          L+ G++I    K    
Sbjct: 64  KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKI 116

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  130 bits (329), Expect = 2e-35
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 280 KGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKC 339
           +G++      S     L  AA     D V++L   GA+  VN ++  GLTPL++A     
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGAD--VNAKDEYGLTPLYLATAHGH 59

Query: 340 LEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL-SVPEGERTALHM 398
           LEIV++LL  GAD+N+ +  G TPL  A     LE+   L+ HG D+ +  +  +TA  +
Sbjct: 60  LEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDI 119

Query: 399 ASQFGNLEMVNYLLKH 414
           +   GN ++   L K 
Sbjct: 120 SIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  125 bits (318), Expect = 7e-34
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             L  A      + V++L+  GA+  A ++    T L++A     ++IV++L   GA+  
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNAKDEYG-LTPLYLATAHGHLEIVEVLLKNGAD-- 72

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
           VN  +  G TPLH+A     LEI ++LL  GAD+N+ +  G T    +I     ++   L
Sbjct: 73  VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

Query: 380 VNH 382
              
Sbjct: 133 QKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  119 bits (302), Expect = 9e-32
 Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 40/170 (23%)

Query: 377 NYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQA 436
           ++  +HG DL         L  A++ G  + V  L+ +                      
Sbjct: 5   HHHHHHGSDL------GKKLLEAARAGQDDEVRILMAN---------------------- 36

Query: 437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIY 495
                      GAD+ AK   G T L+LA   G+L +V  L+K+  D+N+ + +G TP++
Sbjct: 37  -----------GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLH 85

Query: 496 FAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
            A    HLEI  +LLK GADV  + K   T   ++    + ++   L   
Sbjct: 86  LAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  114 bits (288), Expect = 6e-30
 Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           D    L  A   G    V  L+ +  D+N++++ G TP+Y A  + HLEI  +LLK GAD
Sbjct: 13  DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHL 574
           V       FT LH+A     +E+   LL H   VN QD  G T    +I     ++   L
Sbjct: 73  VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

Query: 575 I 575
            
Sbjct: 133 Q 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  105 bits (265), Expect = 8e-27
 Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 45/172 (26%)

Query: 704 LVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAA 763
              +G+D+            L  A+  G  +D  R L+    AD+  ++    T L  A 
Sbjct: 7   HHHHGSDLG---------KKLLEAARAG-QDDEVRILMAN-GADVNAKDEYGLTPLYLAT 55

Query: 764 FGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGS 823
              +L++++ LLK GAD + +D                                    G 
Sbjct: 56  AHGHLEIVEVLLKNGADVNAVD----------------------------------AIGF 81

Query: 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL 875
           T LH AAF   L+I ++LLK+ AD+NA+DK+GK AF  +    N D+   L 
Sbjct: 82  TPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  105 bits (264), Expect = 1e-26
 Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 33/165 (20%)

Query: 513 GADVAVKMKSNF-TCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEV 570
           G+       S+    L  A      + V  L+++   VN +D  G TPL+ A     LE+
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEI 62

Query: 571 FNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGC 630
              L+ + AD+                              N  + IG TPLH+A   G 
Sbjct: 63  VEVLLKNGADV------------------------------NAVDAIGFTPLHLAAFIGH 92

Query: 631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEAN 675
           LE  + LL     DVN + K G TA   +  +   DL EIL + N
Sbjct: 93  LEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 98.6 bits (247), Expect = 2e-24
 Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 45/177 (25%)

Query: 669 EILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYAS 728
                  +D+         L  A       D +++L+  GADVN  +E  Y +TPL+ A+
Sbjct: 5   HHHHHHGSDLG------KKLLEAARAG-QDDEVRILMANGADVNAKDE--YGLTPLYLAT 55

Query: 729 YRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKD 788
             G   +I   L++   AD+   +    T L+ AAF  +L++ + LLK GAD +  D   
Sbjct: 56  AHG-HLEIVEVLLKN-GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQD--- 110

Query: 789 TSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
                                          K G TA   +  +   D+ ++L K N
Sbjct: 111 -------------------------------KFGKTAFDISIGNGNEDLAEILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 98.2 bits (246), Expect = 3e-24
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 572 NHLINSNADITMYKNDSPLHLACATGNMDMITYAMKY-FDVNIENDIGETPLHVAVSHGC 630
           +H  +  +D+        L  A   G  D +   M    DVN +++ G TPL++A +HG 
Sbjct: 5   HHHHHHGSDL-----GKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH 59

Query: 631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLY 689
           LE V+ LL     DVN     G T L  A +   L++ E+LL+  ADVN  D    T   
Sbjct: 60  LEIVEVLLK-NGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFD 118

Query: 690 TALMKDPSLDIIKMLVKY 707
            ++    + D+ ++L K 
Sbjct: 119 ISIGNG-NEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 88.6 bits (221), Expect = 7e-21
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINA 850
            LL + R G  + V  L+   AD N +  ++G T L+ A  H  L+I+++LLK  AD+NA
Sbjct: 17  KLLEAARAGQDDEVRILMANGADVNAKD-EYGLTPLYLATAHGHLEIVEVLLKNGADVNA 75

Query: 851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
            D  G    H A    + +I   LL  G+++    K+  T
Sbjct: 76  VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKT 115

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 62.4 bits (153), Expect = 1e-11
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 14/99 (14%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G   L  A      +I ++L+  G  +N VD               TPLH A     +E+
Sbjct: 47  GLTPLYLATAHGHLEIVEVLLKNGADVNAVDA-----------IGFTPLHLAAFIGHLEI 95

Query: 274 VKLLLEKGANPLAIEKSRN-RTALHVAAIVESVDIVKLL 311
            ++LL+ GA+     + +  +TA  ++    + D+ ++L
Sbjct: 96  AEVLLKHGADV--NAQDKFGKTAFDISIGNGNEDLAEIL 132

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  133 bits (336), Expect = 2e-34
 Identities = 48/329 (14%), Positives = 107/329 (32%), Gaps = 46/329 (13%)

Query: 221 ALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEK 280
            +     D+    +   + +        +N + + ++ +  L   +     E+   L   
Sbjct: 26  PIITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNND 85

Query: 281 GANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQ-NVAGLTPLHIACRRKC 339
            +N  +   S N+   HV+      ++     +      +N+  +  G TPLH       
Sbjct: 86  SSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLN--LNIPVDEHGNTPLHWLTSIAN 143

Query: 340 LEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMA 399
           LE+VK L+  G++   G++ G + L  A+             +  D    E         
Sbjct: 144 LELVKHLVKHGSNRLYGDNMGESCLVKAV----------KSVNNYDSGTFE--------- 184

Query: 400 SQFGNLEMVNYLLKHININHQDKDGWTPL-----TCSIKGQASL------EVFHSIIEAG 448
                  +++YL  +  +  +D    T L     T  + G ++        +   I++  
Sbjct: 185 ------ALLDYL--YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQ 236

Query: 449 ADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-----IDINSENDLGKTPIYFAIKNNHL 503
                   +   +            +   +         +N+++  G T +  A +  ++
Sbjct: 237 NRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNI 296

Query: 504 EIFNLLLKLGADVAVKMKSNFTCLHVACE 532
            I + LL  GAD  +  KS    +     
Sbjct: 297 SIVDALLDYGADPFIANKSGLRPVDFGAG 325

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  128 bits (324), Expect = 9e-33
 Identities = 56/315 (17%), Positives = 105/315 (33%), Gaps = 36/315 (11%)

Query: 572 NHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCL 631
             +I    D+T     SPL +  A  +           + N +    E  L   +     
Sbjct: 25  GPIITFTHDLTSDFLSSPLKIMKALPS--------PVVNDNEQKMKLEAFLQRLLFPEIQ 76

Query: 632 EAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLD-LVEILLEANADVNL---GDGTYTP 687
           E    L N  + + N +    +       +D  L  + +       ++N+     G  TP
Sbjct: 77  EMPTSLNNDSS-NRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHG-NTP 134

Query: 688 LYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARF--LVEECN 745
           L+       +L+++K LVK+G++    +      + L  A    +  D   F  L++   
Sbjct: 135 LHWLTSIA-NLELVKHLVKHGSNRLYGDNMGE--SCLVKAVKSVNNYDSGTFEALLDYLY 191

Query: 746 ADITLRNFNNRTALNFAAFGNNLD------------LLKFLLKAGADPDILDLKDTSPLL 793
             + L +  NRT L+     + +             L+ +++K    P      +     
Sbjct: 192 PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP 251

Query: 794 ----SSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADIN 849
                  +  + E +D         N +   +G T L+ AA    + I+  LL Y AD  
Sbjct: 252 NDKNGERKDSILENLDLKWIIANMLNAQD-SNGDTCLNIAARLGNISIVDALLDYGADPF 310

Query: 850 AEDKYGKIAFHSACQ 864
             +K G         
Sbjct: 311 IANKSGLRPVDFGAG 325

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  122 bits (307), Expect = 1e-30
 Identities = 43/271 (15%), Positives = 89/271 (32%), Gaps = 29/271 (10%)

Query: 416 NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNL-AMV 474
           N N Q       L   +  +   E+  S+    ++  ++            +   L  + 
Sbjct: 55  NDNEQKMKLEAFLQRLLFPEIQ-EMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVN 113

Query: 475 NYLVKH-IDINSEND-LGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACE 532
           +      +++N   D  G TP+++     +LE+   L+K G++         +CL  A +
Sbjct: 114 DAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVK 173

Query: 533 F---ASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLE------------VFNHLI 575
                       LL ++   + L+D+   T LH  I+ + +             +   ++
Sbjct: 174 SVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIV 233

Query: 576 NSNADITMYKNDS--PLHLACATGNMDMITYAMKY-----FDVNIENDIGETPLHVAVSH 628
                      +              D I   +         +N ++  G+T L++A   
Sbjct: 234 KKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARL 293

Query: 629 GCLEAVKFLLNTKNIDVNHKTKDGSTALFFA 659
           G +  V  LL+    D     K G   + F 
Sbjct: 294 GNISIVDALLD-YGADPFIANKSGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 92.0 bits (228), Expect = 3e-20
 Identities = 47/252 (18%), Positives = 80/252 (31%), Gaps = 52/252 (20%)

Query: 169 SDKKETSKNPQSSDSNS---DKALEEELTNIFKKFDLLEHPEYLSHS----------QGY 215
            + +E   +  +  SN      +  ++  ++     L E  +   ++           G 
Sbjct: 73  PEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGN 132

Query: 216 KALCWALQEKKTDIAKLLVDKGVPLNLVDKG--VPL--------NYSRR----------- 254
             L W       ++ K LV  G      D      L        NY              
Sbjct: 133 TPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP 192

Query: 255 -IIETD----TPLHSAILNSDIE------------LVKLLLEKGANPLAIEKSRNRTALH 297
            +I  D    T LH  I+ S +             L+  +++K   P+    +   +  +
Sbjct: 193 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN 252

Query: 298 VAAIVESVDIVKLL-FDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSG 356
                    I++ L   +     +N Q+  G T L+IA R   + IV  LLD GAD    
Sbjct: 253 DKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIA 312

Query: 357 NDDGCTPLFCAI 368
           N  G  P+    
Sbjct: 313 NKSGLRPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 80.8 bits (199), Expect = 2e-16
 Identities = 25/144 (17%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 752 NFNNRTALNFAAFGNNLDLLKFLLKAGAD-PDILDLKDTSPLLSSCRQGLYEIVDTLLEY 810
                  L    F    ++   L    ++        +      S    L E+ D     
Sbjct: 60  KMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT 119

Query: 811 NADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN--- 867
             + N+   +HG+T LH       L+++K L+K+ ++    D  G+     A ++ N   
Sbjct: 120 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 179

Query: 868 WDIVTFLLDA-GSNIEKATKYRMT 890
                 LLD     +        T
Sbjct: 180 SGTFEALLDYLYPCLILEDSMNRT 203

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 67.4 bits (164), Expect = 4e-12
 Identities = 25/184 (13%), Positives = 56/184 (30%), Gaps = 8/184 (4%)

Query: 692 LMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLR 751
           L  D     +K++    + V   NE    +          +  ++   L  + +++    
Sbjct: 34  LTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNND-SSNRNSE 92

Query: 752 NFNNRTALNFAAFGNNLD-LLKFLLKAGADPDI-LDLKDTSPLLSSCRQGLYEIVDTLLE 809
             ++       +F + L  +         + +I +D    +PL         E+V  L++
Sbjct: 93  GGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK 152

Query: 810 YNADTNLRTIKHGSTALHTAAFHN---QLDIIKLLLKYN-ADINAEDKYGKIAFHSACQA 865
           + ++        G + L  A            + LL Y    +  ED   +   H     
Sbjct: 153 HGSNRLYGD-NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIIT 211

Query: 866 KNWD 869
               
Sbjct: 212 SGMT 215

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 57.0 bits (137), Expect = 1e-08
 Identities = 21/147 (14%), Positives = 45/147 (30%), Gaps = 1/147 (0%)

Query: 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIV 804
           N             L      + L ++K L     + +   +K  + L       + E+ 
Sbjct: 20  NDRTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMP 79

Query: 805 DTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINA-EDKYGKIAFHSAC 863
            +L   +++ N           H +      ++         ++N   D++G    H   
Sbjct: 80  TSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLT 139

Query: 864 QAKNWDIVTFLLDAGSNIEKATKYRMT 890
              N ++V  L+  GSN         +
Sbjct: 140 SIANLELVKHLVKHGSNRLYGDNMGES 166

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  125 bits (317), Expect = 6e-34
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 259 DTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGA 316
           D     A+ N D++ VK  + KG +   + ++    R  LH AA    ++I++ L   GA
Sbjct: 8   DKEFMWALKNGDLDEVKDYVAKGED---VNRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64

Query: 317 EKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
           +  +N  +   +TPL  A     +  VK+LL KGAD      DG T       Q    +
Sbjct: 65  D--INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  122 bits (309), Expect = 8e-33
 Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 7/122 (5%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
                  A +   L+ VK  + KG D+N   + G  PL  A     LE+  +L+  G D+
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 66

Query: 387 SVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSI 444
           + P +   T L  A   G++  V  LL    +   +  DG T            +   ++
Sbjct: 67  NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEA-----TDNQAIKAL 121

Query: 445 IE 446
           ++
Sbjct: 122 LQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  120 bits (303), Expect = 4e-32
 Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 5/118 (4%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
                 A     +D VK     G +  VN     G  PLH A     LEI++ LL KGAD
Sbjct: 8   DKEFMWALKNGDLDEVKDYVAKGED--VNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

Query: 353 INSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV--PEGERTALHMASQFGNLEMV 408
           IN+ +    TPL  A+ +  +     L++ G D +V  P+G  TA           ++
Sbjct: 66  INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDG-LTAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  110 bits (279), Expect = 8e-29
 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 5/118 (4%)

Query: 615 NDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
             + +     A+ +G L+ VK  +  K  DVN   + G   L +A    +L+++E LL  
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVA-KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLK 62

Query: 675 NADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRG 731
            AD+N  D    TPL +A+ +   +  +K+L+  GAD  +       +T       + 
Sbjct: 63  GADINAPDKHHITPLLSAVYEG-HVSCVKLLLSKGADKTVKGP--DGLTAFEATDNQA 117

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  110 bits (278), Expect = 1e-28
 Identities = 29/117 (24%), Positives = 42/117 (35%), Gaps = 4/117 (3%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
                   A   G+L  V   V    D+N   + G+ P+++A     LEI   LL  GAD
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEV 570
           +    K + T L  A     +  V  LLS  G    ++   G T            +
Sbjct: 66  INAPDKHHITPLLSAVYEGHVSCVKLLLSK-GADKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  109 bits (274), Expect = 3e-28
 Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 34/148 (22%)

Query: 393 RTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIK 452
                 A + G+L+ V                                    +  G D+ 
Sbjct: 8   DKEFMWALKNGDLDEVKDY---------------------------------VAKGEDVN 34

Query: 453 AKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
             L  G   LH A   G L ++ +L+    DIN+ +    TP+  A+   H+    LLL 
Sbjct: 35  RTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLS 94

Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMV 539
            GAD  VK     T        A   ++
Sbjct: 95  KGADKTVKGPDGLTAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  108 bits (273), Expect = 5e-28
 Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 5/121 (4%)

Query: 357 NDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH- 414
                     A+    L+     V  G D++   EG R  LH A+  G LE++ +LL   
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG 63

Query: 415 ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAM 473
            +IN  DK   TPL     +G   +     ++  GAD   K  DG TA          A+
Sbjct: 64  ADINAPDKHHITPLLSAVYEG--HVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121

Query: 474 V 474
           +
Sbjct: 122 L 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  104 bits (262), Expect = 1e-26
 Identities = 38/183 (20%), Positives = 51/183 (27%), Gaps = 63/183 (34%)

Query: 487 NDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHI 546
             +      +A+KN  L+     +  G D                               
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGED------------------------------- 32

Query: 547 GVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAM 606
            VN     G  PLH A    QLE+   L+   A                           
Sbjct: 33  -VNRTLEGGRKPLHYAADCGQLEILEFLLLKGA--------------------------- 64

Query: 607 KYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLD 666
              D+N  +    TPL  AV  G +  VK LL+ K  D   K  DG TA           
Sbjct: 65  ---DINAPDKHHITPLLSAVYEGHVSCVKLLLS-KGADKTVKGPDGLTAFEATDNQAIKA 120

Query: 667 LVE 669
           L++
Sbjct: 121 LLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 99.0 bits (248), Expect = 1e-24
 Identities = 33/156 (21%), Positives = 48/156 (30%), Gaps = 37/156 (23%)

Query: 552 DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDV 611
            +        A+    L+     +    D                              V
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGED------------------------------V 33

Query: 612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
           N   + G  PLH A   G LE ++FLL  K  D+N   K   T L  A Y+  +  V++L
Sbjct: 34  NRTLEGGRKPLHYAADCGQLEILEFLLL-KGADINAPDKHHITPLLSAVYEGHVSCVKLL 92

Query: 672 LEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVK 706
           L   AD  +      T              IK L++
Sbjct: 93  LSKGADKTVKGPDGLTAFEAT-----DNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 99.0 bits (248), Expect = 1e-24
 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 1/120 (0%)

Query: 752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYN 811
                    +A    +LD +K  +  G D +        PL  +   G  EI++ LL   
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG 63

Query: 812 ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV 871
           AD N    KH  T L +A +   +  +KLLL   AD   +   G  AF +        ++
Sbjct: 64  ADINAPD-KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 92.1 bits (230), Expect = 3e-22
 Identities = 38/133 (28%), Positives = 53/133 (39%), Gaps = 14/133 (10%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI 271
           S   K   WAL+    D  K  V KG  +N           R       PLH A     +
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTL-----EGGR------KPLHYAADCGQL 53

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           E+++ LL KGA+  A +K  + T L  A     V  VKLL   GA+    V+   GLT  
Sbjct: 54  EILEFLLLKGADINAPDKH-HITPLLSAVYEGHVSCVKLLLSKGAD--KTVKGPDGLTAF 110

Query: 332 HIACRRKCLEIVK 344
                +    +++
Sbjct: 111 EATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 79.4 bits (197), Expect = 9e-18
 Identities = 17/71 (23%), Positives = 29/71 (40%)

Query: 820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879
                    A  +  LD +K  +    D+N   + G+   H A      +I+ FLL  G+
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64

Query: 880 NIEKATKYRMT 890
           +I    K+ +T
Sbjct: 65  DINAPDKHHIT 75

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  121 bits (307), Expect = 9e-33
 Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLV 380
              +  G TPLH A +    E VK LL KGAD+N+ + DG TPL  A      E+   L+
Sbjct: 3   MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL 62

Query: 381 NHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPL 428
             G D++   +   T  H+A + G+ E+V  L     ++N +        
Sbjct: 63  AKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  117 bits (295), Expect = 4e-31
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 3/105 (2%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPLH+A  N   E VK LL KGA+  A  K    T LH+AA     +IVKLL   GA+  
Sbjct: 11  TPLHNAAKNGHAEEVKKLLSKGADVNARSKD-GNTPLHLAAKNGHAEIVKLLLAKGAD-- 67

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPL 364
           VN ++  G TP H+A +    EIVK+L  KGAD+N+ +       
Sbjct: 68  VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  115 bits (290), Expect = 2e-30
 Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 6/116 (5%)

Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIF 506
           G    +K  DG T LH A   G+   V  L+    D+N+ +  G TP++ A KN H EI 
Sbjct: 1   GHMWGSK--DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLH 560
            LLL  GADV  + K   T  H+A +    E+V  L +  G  VN +        H
Sbjct: 59  KLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAK-GADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  110 bits (278), Expect = 8e-29
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 350 GADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMV 408
           G      + DG TPL  A      E    L++ G D++   +   T LH+A++ G+ E+V
Sbjct: 1   GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 409 NYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALH 463
             LL    ++N + KDG TP       G    E+   +   GAD+ A+    +   H
Sbjct: 59  KLLLAKGADVNARSKDGNTPEHLAKKNG--HHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  106 bits (267), Expect = 3e-27
 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 5/116 (4%)

Query: 612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
              +  G TPLH A  +G  E VK LL+ K  DVN ++KDG+T L  A  +   ++V++L
Sbjct: 3   MWGSKDGNTPLHNAAKNGHAEEVKKLLS-KGADVNARSKDGNTPLHLAAKNGHAEIVKLL 61

Query: 672 LEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHY 726
           L   ADVN       TP + A       +I+K+L   GADVN  +         H+
Sbjct: 62  LAKGADVNARSKDGNTPEHLAKKNG-HHEIVKLLDAKGADVNARSW--GSSHHHHH 114

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  105 bits (265), Expect = 5e-27
 Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 34/137 (24%)

Query: 393 RTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIK 452
            T LH A++ G+ E V  LL                                   GAD+ 
Sbjct: 10  NTPLHNAAKNGHAEEVKKLLSK---------------------------------GADVN 36

Query: 453 AKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
           A+  DG T LHLA   G+  +V  L+    D+N+ +  G TP + A KN H EI  LL  
Sbjct: 37  ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDA 96

Query: 512 LGADVAVKMKSNFTCLH 528
            GADV  +   +    H
Sbjct: 97  KGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 99.4 bits (249), Expect = 6e-25
 Identities = 39/144 (27%), Positives = 54/144 (37%), Gaps = 32/144 (22%)

Query: 547 GVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAM 606
           G       G TPLH A      E    L++  AD+                         
Sbjct: 1   GHMWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV------------------------- 35

Query: 607 KYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLD 666
                N  +  G TPLH+A  +G  E VK LL  K  DVN ++KDG+T    A  +   +
Sbjct: 36  -----NARSKDGNTPLHLAAKNGHAEIVKLLLA-KGADVNARSKDGNTPEHLAKKNGHHE 89

Query: 667 LVEILLEANADVNLGDGT-YTPLY 689
           +V++L    ADVN          +
Sbjct: 90  IVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 98.2 bits (246), Expect = 2e-24
 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
           +  T L+ AA   + + +K LL  GAD +       +PL  + + G  EIV  LL   AD
Sbjct: 8   DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFH 860
            N R+ K G+T  H A  +   +I+KLL    AD+NA         H
Sbjct: 68  VNARS-KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 80.9 bits (201), Expect = 2e-18
 Identities = 25/71 (35%), Positives = 37/71 (52%)

Query: 820 KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879
           K G+T LH AA +   + +K LL   AD+NA  K G    H A +  + +IV  LL  G+
Sbjct: 7   KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66

Query: 880 NIEKATKYRMT 890
           ++   +K   T
Sbjct: 67  DVNARSKDGNT 77

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 51.6 bits (125), Expect = 3e-08
 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 14/85 (16%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G   L  A +    +I KLL+ KG  +N   K           + +TP H A  N   E+
Sbjct: 42  GNTPLHLAAKNGHAEIVKLLLAKGADVNARSK-----------DGNTPEHLAKKNGHHEI 90

Query: 274 VKLLLEKGANPLAIEKSRN-RTALH 297
           VKLL  KGA+  A  +S       H
Sbjct: 91  VKLLDAKGADVNA--RSWGSSHHHH 113

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  108 bits (272), Expect = 3e-28
 Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 2/91 (2%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
           RT LH+AA    +++VKLL + GA+  VN ++  G TPLH+A R   LE+VK+LL+ GAD
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 353 INSGNDDGCTPLFCAIAQNCLEVFNYLVNHG 383
           +N+ + +G TPL  A     LEV   L+  G
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  105 bits (265), Expect = 2e-27
 Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL 386
           G TPLH+A R   LE+VK+LL+ GAD+N+ + +G TPL  A     LEV   L+  G D+
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 387 SVP-EGERTALHMASQFGNLEMVNYLLKH 414
           +   +  RT LH+A++ G+LE+V  LL+ 
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEA 90

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 97.0 bits (243), Expect = 2e-24
 Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 34/123 (27%)

Query: 393 RTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIK 452
           RT LH+A++ G+LE+V  LL+                                  GAD+ 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEA---------------------------------GADVN 29

Query: 453 AKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
           AK  +G T LHLA   G+L +V  L++   D+N+++  G+TP++ A +N HLE+  LLL+
Sbjct: 30  AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89

Query: 512 LGA 514
            GA
Sbjct: 90  AGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 95.5 bits (239), Expect = 9e-24
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGAD 515
           +G T LHLA   G+L +V  L++   D+N+++  G+TP++ A +N HLE+  LLL+ GAD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
           V  K K+  T LH+A     +E+V  LL  
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 94.7 bits (237), Expect = 2e-23
 Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 7/94 (7%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRN--RTALHVAAIVESVDIVKLLFDYGAE 317
           TPLH A  N  +E+VKLLLE GA+   +       RT LH+AA    +++VKLL + GA+
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 318 KSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
             VN ++  G TPLH+A R   LE+VK+LL+ GA
Sbjct: 61  --VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 91.3 bits (228), Expect = 2e-22
 Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 3/93 (3%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
           G TPLH+A  +G LE VK LL     DVN K K+G T L  A  +  L++V++LLEA AD
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 678 VNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGA 709
           VN  D    TPL+ A      L+++K+L++ GA
Sbjct: 61  VNAKDKNGRTPLHLAARNG-HLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 87.8 bits (219), Expect = 4e-21
 Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 36/124 (29%)

Query: 359 DGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH-INI 417
           +G TPL                                H+A++ G+LE+V  LL+   ++
Sbjct: 1   NGRTPL--------------------------------HLAARNGHLEVVKLLLEAGADV 28

Query: 418 NHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNY 476
           N +DK+G TPL   +  G   LEV   ++EAGAD+ AK  +G T LHLA   G+L +V  
Sbjct: 29  NAKDKNGRTPLHLAARNG--HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 86

Query: 477 LVKH 480
           L++ 
Sbjct: 87  LLEA 90

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 85.1 bits (212), Expect = 3e-20
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 34/125 (27%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
           N RT L+ AA   +L+++K LL+AGAD +  D                            
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKD---------------------------- 32

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
                 K+G T LH AA +  L+++KLLL+  AD+NA+DK G+   H A +  + ++V  
Sbjct: 33  ------KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 86

Query: 874 LLDAG 878
           LL+AG
Sbjct: 87  LLEAG 91

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 81.6 bits (203), Expect = 6e-19
 Identities = 43/122 (35%), Positives = 55/122 (45%), Gaps = 31/122 (25%)

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIE 614
           G TPLH A     LEV   L+ + AD                              VN +
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGAD------------------------------VNAK 31

Query: 615 NDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
           +  G TPLH+A  +G LE VK LL     DVN K K+G T L  A  +  L++V++LLEA
Sbjct: 32  DKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90

Query: 675 NA 676
            A
Sbjct: 91  GA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 78.9 bits (196), Expect = 5e-18
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 821 HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
           +G T LH AA +  L+++KLLL+  AD+NA+DK G+   H A +  + ++V  LL+AG++
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 881 IEKATKYRMT 890
           +    K   T
Sbjct: 61  VNAKDKNGRT 70

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 78.9 bits (196), Expect = 5e-18
 Identities = 43/149 (28%), Positives = 57/149 (38%), Gaps = 62/149 (41%)

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVN 549
           G+TP++ A +N HLE+  LLL+ GADV                                N
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADV--------------------------------N 29

Query: 550 LQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYF 609
            +D  G TPLH A     LEV   L+ + AD+                            
Sbjct: 30  AKDKNGRTPLHLAARNGHLEVVKLLLEAGADV---------------------------- 61

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLL 638
             N ++  G TPLH+A  +G LE VK LL
Sbjct: 62  --NAKDKNGRTPLHLAARNGHLEVVKLLL 88

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 78.6 bits (195), Expect = 7e-18
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 5/93 (5%)

Query: 651 DGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGA 709
           +G T L  A  +  L++V++LLEA ADVN  D    TPL+ A      L+++K+L++ GA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG-HLEVVKLLLEAGA 59

Query: 710 DVNLTNEACYYMTPLHYASYRGDCNDIARFLVE 742
           DVN  ++     TPLH A+  G   ++ + L+E
Sbjct: 60  DVNAKDK--NGRTPLHLAARNG-HLEVVKLLLE 89

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 74.3 bits (184), Expect = 2e-16
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 36/126 (28%)

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
            TPLH A+  G   ++ + L+E   AD+  ++ N RT L+ AA   +L+++K LL+AGAD
Sbjct: 3   RTPLHLAARNG-HLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKL 840
            +  D                                  K+G T LH AA +  L+++KL
Sbjct: 61  VNAKD----------------------------------KNGRTPLHLAARNGHLEVVKL 86

Query: 841 LLKYNA 846
           LL+  A
Sbjct: 87  LLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 47.3 bits (114), Expect = 7e-07
 Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 13/70 (18%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDK-GVPLNYSRRIIETDTPLHSAILNSDIE 272
           G   L  A +    ++ KLL++ G  +N  DK G             TPLH A  N  +E
Sbjct: 35  GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG------------RTPLHLAARNGHLE 82

Query: 273 LVKLLLEKGA 282
           +VKLLLE GA
Sbjct: 83  VVKLLLEAGA 92

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  105 bits (264), Expect = 5e-27
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 6/114 (5%)

Query: 299 AAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGND 358
            +          L   G+              L  A R    + V+IL+  GAD+ + + 
Sbjct: 1   GSSHHHHHHSSGLVPRGSHM-----GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDK 55

Query: 359 DGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYL 411
           +G TPL  A     LEV   L+  G D+   +   +TA  ++   GN ++   L
Sbjct: 56  NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  104 bits (262), Expect = 1e-26
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 6/115 (5%)

Query: 265 AILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQN 324
              +        L+ +G++   +        L  AA     D V++L   GA+  V  ++
Sbjct: 1   GSSHHHHHHSSGLVPRGSH---MGS-DLGKKLLEAARAGQDDEVRILMANGAD--VAAKD 54

Query: 325 VAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
             G TPLH+A R   LE+VK+LL+ GAD+ + +  G T    +I     ++   L
Sbjct: 55  KNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 96.5 bits (241), Expect = 5e-24
 Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 39/146 (26%)

Query: 334 ACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGER 393
                       L+ +G+ + S   D    L                             
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS---DLGKKL----------------------------- 28

Query: 394 TALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADI 451
                A++ G  + V  L+ +  ++  +DK+G TPL   +  G   LEV   ++EAGAD+
Sbjct: 29  ---LEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNG--HLEVVKLLLEAGADV 83

Query: 452 KAKLMDGTTALHLACYFGNLAMVNYL 477
            A+   G TA  ++   GN  +   L
Sbjct: 84  XAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 94.9 bits (237), Expect = 2e-23
 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 399 ASQFGNLEMVNYLLKH-ININHQDKDGWTPLTC-SIKGQASLEVFHSIIEAGADIKAKLM 456
            S   +    + L+    ++     D    L   +  G    +    ++  GAD+ AK  
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAARAG--QDDEVRILMANGADVAAKDK 55

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLL 509
           +G+T LHLA   G+L +V  L++   D+ +++  GKT    +I N + ++  +L
Sbjct: 56  NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 89.9 bits (224), Expect = 1e-21
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)

Query: 762 AAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH 821
            +  ++      L+  G+    +       LL + R G  + V  L+   AD   +  K+
Sbjct: 1   GSSHHHHHHSSGLVPRGSH---MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKD-KN 56

Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           GST LH AA +  L+++KLLL+  AD+ A+DK+GK AF  +    N D+   L
Sbjct: 57  GSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 8/112 (7%)

Query: 497 AIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNK 554
              ++H    + L+  G+ +          L  A      + V  L+++ G  V  +D  
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSD---LGKKLLEAARAGQDDEVRILMAN-GADVAAKDKN 56

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITY 604
           G TPLH A     LEV   L+ + AD+        +   ++   GN D+   
Sbjct: 57  GSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEI 108

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 85.7 bits (213), Expect = 4e-20
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHS 861
                L+   +             L  AA   Q D +++L+   AD+ A+DK G    H 
Sbjct: 8   HHSSGLVPRGSHMG----SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHL 63

Query: 862 ACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
           A +  + ++V  LL+AG+++    K+  T
Sbjct: 64  AARNGHLEVVKLLLEAGADVXAQDKFGKT 92

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 85.3 bits (212), Expect = 5e-20
 Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 465 ACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSN 523
                +    + LV     + S+       +  A +    +   +L+  GADVA K K+ 
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSD---LGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 524 FTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEVFNHL 574
            T LH+A     +E+V  LL   G  V  QD  G T    +I     ++   L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEA-GADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 81.9 bits (203), Expect = 8e-19
 Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 9/117 (7%)

Query: 625 AVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT 684
             SH        L+  +   +     D    L  A    + D V IL+   ADV   D  
Sbjct: 1   GSSHHHHHHSSGLVP-RGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKN 56

Query: 685 -YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFL 740
             TPL+ A      L+++K+L++ GADV   ++  +  T    +   G   D+A  L
Sbjct: 57  GSTPLHLAARNG-HLEVVKLLLEAGADVXAQDK--FGKTAFDISIDNG-NEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 81.9 bits (203), Expect = 8e-19
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 7/116 (6%)

Query: 659 ACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEAC 718
                       L+   + +   D     L  A       D +++L+  GADV   ++  
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG-SDL-GKKLLEAARAG-QDDEVRILMANGADVAAKDK-- 55

Query: 719 YYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFL 774
              TPLH A+  G   ++ + L+E   AD+  ++   +TA + +    N DL + L
Sbjct: 56  NGSTPLHLAARNG-HLEVVKLLLEA-GADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 81.9 bits (203), Expect = 8e-19
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 7/111 (6%)

Query: 697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNR 756
                  LV  G+ +            L  A+  G  +D  R L+    AD+  ++ N  
Sbjct: 6   HHHHSSGLVPRGSHMGSDLG-----KKLLEAARAG-QDDEVRILMAN-GADVAAKDKNGS 58

Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTL 807
           T L+ AA   +L+++K LL+AGAD    D    +    S   G  ++ + L
Sbjct: 59  TPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 81.1 bits (201), Expect = 1e-18
 Identities = 33/142 (23%), Positives = 48/142 (33%), Gaps = 33/142 (23%)

Query: 530 ACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSP 589
                     S L+   G ++  +     L  A    Q +    L+ + AD+        
Sbjct: 1   GSSHHHHHHSSGLVPR-GSHM-GSDLGKKLLEAARAGQDDEVRILMANGADV-------- 50

Query: 590 LHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKT 649
                                   ++  G TPLH+A  +G LE VK LL     DV  + 
Sbjct: 51  ----------------------AAKDKNGSTPLHLAARNGHLEVVKLLLE-AGADVXAQD 87

Query: 650 KDGSTALFFACYDKRLDLVEIL 671
           K G TA   +  +   DL EIL
Sbjct: 88  KFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 79.2 bits (196), Expect = 8e-18
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
           ++ +D     L  A   G  + V+ L+     DV  K K+GST L  A  +  L++V++L
Sbjct: 19  HMGSD-LGKKLLEAARAGQDDEVRILMA-NGADVAAKDKNGSTPLHLAARNGHLEVVKLL 76

Query: 672 LEANADVNLGDGT-YTPLYTALMKDPSLDIIKML 704
           LEA ADV   D    T    ++    + D+ ++L
Sbjct: 77  LEAGADVXAQDKFGKTAFDISIDNG-NEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 12/98 (12%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
             K L  A +  + D  ++L+  G  +   DK              TPLH A  N  +E+
Sbjct: 24  LGKKLLEAARAGQDDEVRILMANGADVAAKDK-----------NGSTPLHLAARNGHLEV 72

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLL 311
           VKLLLE GA+  A +K   +TA  ++    + D+ ++L
Sbjct: 73  VKLLLEAGADVXAQDKF-GKTAFDISIDNGNEDLAEIL 109

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 78.5 bits (193), Expect = 8e-16
 Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 244 DKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN-----RTALHV 298
            K V   ++RR       L +AI N D+  V      G +        +        LH+
Sbjct: 137 AKYVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHL 196

Query: 299 AAIVE---SVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINS 355
           A  V    S+ +V  +   G    ++ +   G T LH A      + +K+LL   A + +
Sbjct: 197 AVKVANQASLPLVDFIIQNGGH--LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGT 254

Query: 356 GNDDGCTPLFCAI 368
            N+ G T L  A 
Sbjct: 255 VNEAGETALDIAR 267

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 75.0 bits (184), Expect = 1e-14
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 10/124 (8%)

Query: 766 NNLDLLKFLLKAGADPDI------LDLKDTSPLLSSCRQG---LYEIVDTLLEYNADTNL 816
            +L  +      G D             +   L  + +        +VD +++     + 
Sbjct: 162 RDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA 221

Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD 876
           +    G+TALH AA +NQ D +KLLLK  A +   ++ G+ A   A +  + +    L  
Sbjct: 222 KA-ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ 280

Query: 877 AGSN 880
           A + 
Sbjct: 281 AQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 10/129 (7%)

Query: 397 HMASQFGNLEMVNYLLKH-------ININHQDKDGWTPL--TCSIKGQASLEVFHSIIEA 447
             A    +L  V     +       +            L     +  QASL +   II+ 
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215

Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIF 506
           G  + AK  DG TALH A  +     +  L+K    + + N+ G+T +  A K +H E  
Sbjct: 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECE 275

Query: 507 NLLLKLGAD 515
            LL +  A 
Sbjct: 276 ELLEQAQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 457 DGTTALHLACYFGN---LAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
                LHLA    N   L +V++++++   ++++   G T +++A   N  +   LLLK 
Sbjct: 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG 248

Query: 513 GADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLH 560
            A V    ++  T L +A +    E    L        Q      PLH
Sbjct: 249 RALVGTVNEAGETALDIARKKHHKECEELL-----EQAQAGTFAFPLH 291

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 7/123 (5%)

Query: 693 MKDPSLDIIKMLVKYGADVNLTNEACY----YMTPLHYASYRGDCND--IARFLVEECNA 746
           + +  L  +      G D                 LH A    +     +  F+++    
Sbjct: 159 ICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GG 217

Query: 747 DITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDT 806
            +  +  +  TAL++AA  N  D LK LLK  A    ++    + L  + ++   E  + 
Sbjct: 218 HLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEEL 277

Query: 807 LLE 809
           L +
Sbjct: 278 LEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 60.8 bits (147), Expect = 6e-10
 Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 11/117 (9%)

Query: 332 HIACRRKCLEIVKILLDKGADINS------GNDDGCTPLFCAIA---QNCLEVFNYLVNH 382
             A   + L  V      G D                 L  A+    Q  L + ++++ +
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215

Query: 383 GCDLSVPEGE-RTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQAS 437
           G  L     +  TALH A+ +   + +  LLK    +   ++ G T L  + K    
Sbjct: 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK 272

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 58.5 bits (141), Expect = 3e-09
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 4/105 (3%)

Query: 313 DYGAEKSVNVQNVAGLTPLHIACR---RKCLEIVKILLDKGADINSGNDDGCTPLFCAIA 369
           D+G               LH+A +   +  L +V  ++  G  +++   DG T L  A  
Sbjct: 176 DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAAL 235

Query: 370 QNCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLK 413
            N  +    L+     +        TAL +A +  + E    L +
Sbjct: 236 YNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 58.1 bits (140), Expect = 4e-09
 Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 12/120 (10%)

Query: 493 PIYFAIKNNHLEIFNLLLKLGADVAVKMKSNF------TCLHVACEFA---SIEMVSFLL 543
            ++ AI N  L         G D    +            LH+A + A   S+ +V F++
Sbjct: 154 RLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII 213

Query: 544 SH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITM--YKNDSPLHLACATGNMD 600
            +   ++ +   G T LH A + NQ +    L+   A +       ++ L +A    + +
Sbjct: 214 QNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 273

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 54.6 bits (131), Expect = 5e-08
 Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 13/136 (9%)

Query: 554 KGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--------SPLHLACATGN---MDMI 602
                L  AI    L        +  D                 LHLA    N   + ++
Sbjct: 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLV 209

Query: 603 TYAMKY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACY 661
            + ++    ++ +   G T LH A  +   + +K LL      V    + G TAL  A  
Sbjct: 210 DFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLL-KGRALVGTVNEAGETALDIARK 268

Query: 662 DKRLDLVEILLEANAD 677
               +  E+L +A A 
Sbjct: 269 KHHKECEELLEQAQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 618 GETPLHVAVS---HGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
            E  LH+AV       L  V F++      ++ K  DG+TAL +A    + D +++LL+ 
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCLKLLLKG 248

Query: 675 NADVNLGDGTY-TPLYTA 691
            A V   +    T L  A
Sbjct: 249 RALVGTVNEAGETALDIA 266

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 51.5 bits (123), Expect = 6e-07
 Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 17/138 (12%)

Query: 188 ALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGV 247
           A  ++        D     E + H            +    +   ++  G  L+      
Sbjct: 172 ANGQDFGQPLPGPDAQAPEELVLH-----LAVKVANQASLPLVDFIIQNGGHLDAKAA-- 224

Query: 248 PLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDI 307
                    + +T LH A L +  + +KLLL+  A    + ++   TAL +A      + 
Sbjct: 225 ---------DGNTALHYAALYNQPDCLKLLLKGRALVGTVNEA-GETALDIARKKHHKEC 274

Query: 308 VKLLFDYGAEKSVNVQNV 325
            +LL    A       +V
Sbjct: 275 EELLEQAQAGTFAFPLHV 292

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 50.8 bits (121), Expect = 1e-06
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 821 HGSTALHTA---AFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDA 877
                LH A   A    L ++  +++    ++A+   G  A H A      D +  LL  
Sbjct: 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG 248

Query: 878 GSNIE 882
            + + 
Sbjct: 249 RALVG 253

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 13/143 (9%)

Query: 647 HKTKDGSTALFFACYDKRLDLVEILLEANADVN---LGDGTYTPLYTALM------KDPS 697
            +       L+ A  ++ L  V        D      G     P    L          S
Sbjct: 146 RRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS 205

Query: 698 LDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRT 757
           L ++  +++ G  ++         T LHYA+      D  + L++   A +   N    T
Sbjct: 206 LPLVDFIIQNGGHLDAKAADG--NTALHYAALYNQ-PDCLKLLLK-GRALVGTVNEAGET 261

Query: 758 ALNFAAFGNNLDLLKFLLKAGAD 780
           AL+ A   ++ +  + L +A A 
Sbjct: 262 ALDIARKKHHKECEELLEQAQAG 284

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 75.0 bits (184), Expect = 8e-15
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 4/97 (4%)

Query: 787 KDTSPLLSSCRQG---LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK 843
            D + L  + R        IVD L++ + + + +T   GSTALH     +  + +KLLL+
Sbjct: 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQT-GKGSTALHYCCLTDNAECLKLLLR 226

Query: 844 YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880
             A I   ++ G+     A + K+      L  A S 
Sbjct: 227 GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 263 HSAILNSDIELVKLLLEKGAN-----PLAIEKSRNRTALHVAAIVE---SVDIVKLLFDY 314
             A+   DI  +      G +     PLA     + TALH+A       S+ IV  L   
Sbjct: 135 CEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN 194

Query: 315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAI 368
               +++ Q   G T LH  C     E +K+LL   A I   N+ G TPL  A 
Sbjct: 195 SG--NLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 246

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 243 VDKGVPLNYSRRIIETDTPLHSAILNSD---IELVKLLLEKGANPLAIEKSRNRTALHVA 299
           VD    +  +      +T LH A+ + D   + +V  L++   N L  +  +  TALH  
Sbjct: 154 VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYC 212

Query: 300 AIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILL 347
            + ++ + +KLL    A  S+ + N +G TPL IA R K     ++L 
Sbjct: 213 CLTDNAECLKLLLRGKA--SIEIANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 3/103 (2%)

Query: 413 KHININHQDKDGWTPLTCSIKG--QASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGN 470
           + I + +  +   T L  +++   + SL +   +++   ++  +   G+TALH  C   N
Sbjct: 158 EKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN 217

Query: 471 LAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
              +  L++    I   N+ G+TP+  A +  H     LL + 
Sbjct: 218 AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 64.2 bits (156), Expect = 3e-11
 Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 12/102 (11%)

Query: 329 TPLHIACR---RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385
           T LH+A R   R  L IV  L+    +++     G T L      +  E    L+     
Sbjct: 171 TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS 230

Query: 386 LSVPEGE-RTALHMASQFGNLEMVNYLLK--------HININ 418
           + +      T L +A +  +      L +        H+++ 
Sbjct: 231 IEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVE 272

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 60.4 bits (146), Expect = 5e-10
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 3/108 (2%)

Query: 705 VKYGADVNLTNEACYYMTPLHYASYRGD--CNDIARFLVEECNADITLRNFNNRTALNFA 762
           V     + L N      T LH A    D     I  FLV+  + ++  +     TAL++ 
Sbjct: 154 VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTALHYC 212

Query: 763 AFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEY 810
              +N + LK LL+  A  +I +    +PL  + R       + L + 
Sbjct: 213 CLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 457 DGTTALHLACYFGN---LAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
              TALHLA    +   L +V++LV++  +++ +   G T +++    ++ E   LLL+ 
Sbjct: 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG 227

Query: 513 GADVAVKMKSNFTCLHVACEFASIEMVSFLL 543
            A + +  +S  T L +A           L 
Sbjct: 228 KASIEIANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 58.1 bits (140), Expect = 4e-09
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 13/125 (10%)

Query: 562 AIVGNQLEVFNHLINSNADITMYKN--------DSPLHLACATGN---MDMITYAMKY-F 609
           A+    +           D+T            ++ LHLA  + +   + ++ + ++   
Sbjct: 137 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG 196

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           +++ +   G T LH        E +K LL  K   +    + G T L  A   K     E
Sbjct: 197 NLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA-SIEIANESGETPLDIAKRLKHEHCEE 255

Query: 670 ILLEA 674
           +L +A
Sbjct: 256 LLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 552 DNKGCTPLHCAIV---GNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAM 606
                T LH A+       L + + L+ ++ ++        + LH  C T N + +   +
Sbjct: 166 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL 225

Query: 607 KY-FDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKN 642
           +    + I N+ GETPL +A         + L    +
Sbjct: 226 RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 16/157 (10%)

Query: 173 ETSKNPQSSDSNSDKALEEELTNIFKKFDLLE-HPEYLSHSQGYKAL---CWALQEKKTD 228
             +K     ++   + +   L       DL E  P    H     AL     ++      
Sbjct: 127 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 186

Query: 229 IAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIE 288
           I   LV     L+               +  T LH   L  + E +KLLL   A+     
Sbjct: 187 IVDFLVQNSGNLDKQTG-----------KGSTALHYCCLTDNAECLKLLLRGKASIEIAN 235

Query: 289 KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNV 325
           +S   T L +A  ++     +LL    + +  +  +V
Sbjct: 236 ES-GETPLDIAKRLKHEHCEELLTQALSGRFNSHVHV 271

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 615 NDIGETPLHVAVSHG---CLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
           ++  ET LH+AV       L  V FL+   + +++ +T  GSTAL + C     + +++L
Sbjct: 166 HEPDETALHLAVRSVDRTSLHIVDFLV-QNSGNLDKQTGKGSTALHYCCLTDNAECLKLL 224

Query: 672 LEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKY 707
           L   A + + + +  TPL  A          ++L + 
Sbjct: 225 LRGKASIEIANESGETPLDIAKRLK-HEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 55.0 bits (132), Expect = 4e-08
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 4/94 (4%)

Query: 754 NNRTALNFA---AFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEY 810
            + TAL+ A       +L ++ FL++   + D    K ++ L   C     E +  LL  
Sbjct: 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG 227

Query: 811 NADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKY 844
            A   +   + G T L  A         +LL + 
Sbjct: 228 KASIEIAN-ESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 53.5 bits (128), Expect = 1e-07
 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 647 HKTKDGSTALFFAC---YDKRLDLVEILLEANADVNLGDGTY-TPLYTALMKDPSLDIIK 702
           +  +   TAL  A        L +V+ L++ + +++   G   T L+   + D + + +K
Sbjct: 164 NGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTD-NAECLK 222

Query: 703 MLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVE 742
           +L++  A + + NE+    TPL  A            L +
Sbjct: 223 LLLRGKASIEIANESG--ETPLDIAKRLK-HEHCEELLTQ 259

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 4/115 (3%)

Query: 772 KFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLR-TIKHGSTALHTA- 829
           ++  K  AD           + +    GL +     ++      L    +   TALH A 
Sbjct: 118 RYARKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAV 177

Query: 830 --AFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882
                  L I+  L++ + +++ +   G  A H  C   N + +  LL   ++IE
Sbjct: 178 RSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE 232

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 77.2 bits (190), Expect = 9e-15
 Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 251 YSRRIIETDTPLHSAILNSDIELVKLLLEKGAN-----PLAIEKSRNRTALHVAAIVE-- 303
           ++RR       L +AI N D+  V      G +     P    ++     LH+A  V   
Sbjct: 125 FARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQ 184

Query: 304 -SVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCT 362
            S+ +V  +   G    ++ +   G T LH A      + +K+LL   A + + N+ G T
Sbjct: 185 ASLPLVDFIIQNGG--HLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGET 242

Query: 363 PLFCA 367
            L  A
Sbjct: 243 ALDIA 247

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 62.6 bits (152), Expect = 3e-10
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 10/125 (8%)

Query: 762 AAFGNNLDLLKFLLKAGADPDI------LDLKDTSPLLSSCR---QGLYEIVDTLLEYNA 812
           A    +L  +      G D             +   L  + +   Q    +VD +++   
Sbjct: 139 AICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG 198

Query: 813 DTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVT 872
             + +    G+TALH AA +NQ D +KLLLK  A +   ++ G+ A   A +  + +   
Sbjct: 199 HLDAKA-ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257

Query: 873 FLLDA 877
            L  A
Sbjct: 258 LLEQA 262

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 54.9 bits (132), Expect = 8e-08
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 10/110 (9%)

Query: 497 AIKNNHLEIFNLLLKLGADVAVKMKSNF------TCLHVACEFA---SIEMVSFLLSH-I 546
           AI N  L         G D    +            LH+A + A   S+ +V F++ +  
Sbjct: 139 AICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG 198

Query: 547 GVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACAT 596
            ++ +   G T LH A + NQ +    L+   A +          L  A 
Sbjct: 199 HLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 248

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 54.5 bits (131), Expect = 1e-07
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 243 VDKGVPLNYSRRIIETDTPLHSAILNSD---IELVKLLLEKGANPLAIEKSRNRTALHVA 299
            D G PL         +  LH A+  ++   + LV  +++ G + L  + +   TALH A
Sbjct: 156 QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALHYA 214

Query: 300 AIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKIL 346
           A+    D +KLL    A   V   N AG T L IA ++   E  ++L
Sbjct: 215 ALYNQPDCLKLLLKGRA--LVGTVNEAGETALDIARKKHHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 53.4 bits (128), Expect = 2e-07
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 688 LYTALMKDPSLDIIKML---VKYGADVNLTNEACYYMTPLHYASYRGDCND--IARFLVE 742
           L+TA+     L +++       +G  +   +        LH A    +     +  F+++
Sbjct: 136 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ 195

Query: 743 ECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYE 802
                +  +  +  TAL++AA  N  D LK LLK  A    ++    + L  + ++   E
Sbjct: 196 N-GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 254

Query: 803 IVDTL 807
             + L
Sbjct: 255 CEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 51.8 bits (124), Expect = 7e-07
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)

Query: 615 NDIGETPLHVAVSH---GCLEAVKFLL-NTKNIDVNHKTKDGSTALFFACYDKRLDLVEI 670
               E  LH+AV       L  V F++ N     ++ K  DG+TAL +A    + D +++
Sbjct: 168 QAPEELVLHLAVKVANQASLPLVDFIIQN--GGHLDAKAADGNTALHYAALYNQPDCLKL 225

Query: 671 LLEANADVNLGDGT 684
           LL+  A V   +  
Sbjct: 226 LLKGRALVGTVNEA 239

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 48.0 bits (114), Expect = 1e-05
 Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 3/68 (4%)

Query: 822 GSTALHTAAFHNQ---LDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878
               LH A        L ++  +++    ++A+   G  A H A      D +  LL   
Sbjct: 171 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 230

Query: 879 SNIEKATK 886
           + +    +
Sbjct: 231 ALVGTVNE 238

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 71.7 bits (175), Expect = 3e-13
 Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 766 NNLDLLKFLLKAGADPDIL--DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGS 823
            +L  +   L  GAD + +     + +PL+ +         + LL+  A+ N      G 
Sbjct: 211 PSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQAD-SAGR 269

Query: 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882
             LH A       +  L LK  AD+ A D  G+     A +  N DIVT L  A     
Sbjct: 270 GPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREA 328

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 63.6 bits (154), Expect = 1e-10
 Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 1/136 (0%)

Query: 290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDK 349
                    +    S+  +     +GA+ +         TPL  A     L   + LL  
Sbjct: 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQN 257

Query: 350 GADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMV 408
           GA++N  +  G  PL  A       +    +  G DL       R  L +A +  N ++V
Sbjct: 258 GANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIV 317

Query: 409 NYLLKHININHQDKDG 424
             L        +   G
Sbjct: 318 TLLRLAKMREAEAAQG 333

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 61.3 bits (148), Expect = 6e-10
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 3/134 (2%)

Query: 413 KHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLM--DGTTALHLACYFGN 470
           +  + +         L  +     SL      +  GAD+       D  T L  A    +
Sbjct: 188 EPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANS 247

Query: 471 LAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHV 529
           L    +L+++  ++N  +  G+ P++ A    H  +  L LK GAD+  +       L +
Sbjct: 248 LLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTI 307

Query: 530 ACEFASIEMVSFLL 543
           A E A+ ++V+ L 
Sbjct: 308 AMETANADIVTLLR 321

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 55.9 bits (134), Expect = 3e-08
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 2/115 (1%)

Query: 695 DPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFN 754
            PSL  +   + +GADVN  N      TPL  A+          FL++   A++   +  
Sbjct: 210 PPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSL-LACEFLLQN-GANVNQADSA 267

Query: 755 NRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLE 809
            R  L+ A    +  L    LK GAD    D +   PL  +      +IV  L  
Sbjct: 268 GRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 54.8 bits (131), Expect = 7e-08
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 7/126 (5%)

Query: 618 GETPLHVAVSHGCLEAVKFLL-NTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANA 676
           G      +     L  +   L +  +++  +  +D +T L  A     L   E LL+  A
Sbjct: 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGA 259

Query: 677 DVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRG--DC 733
           +VN  D     PL+ A +   +  +  + +K GAD+   +       PL  A      D 
Sbjct: 260 NVNQADSAGRGPLHHATILGHT-GLACLFLKRGADLGARDSEG--RDPLTIAMETANADI 316

Query: 734 NDIARF 739
             + R 
Sbjct: 317 VTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 54.0 bits (129), Expect = 1e-07
 Identities = 34/156 (21%), Positives = 53/156 (33%), Gaps = 16/156 (10%)

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNADITM----YKNDSPLHLACATGNMDMITYAMKY-F 609
           G      +     L      +   AD+        N +PL  A A  ++    + ++   
Sbjct: 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGA 259

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           +VN  +  G  PLH A   G        L  +  D+  +  +G   L  A      D+V 
Sbjct: 260 NVNQADSAGRGPLHHATILGHTGLACLFL-KRGADLGARDSEGRDPLTIAMETANADIVT 318

Query: 670 ILLEA------NADVNLGDGTYTPLYTALMKDPSLD 699
           +L  A       A    GD TY      + +D SL 
Sbjct: 319 LLRLAKMREAEAAQGQAGDETYLD----IFRDFSLM 350

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 52.5 bits (125), Expect = 3e-07
 Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 497 AIKNNHLEIFNLLLKLGADV--AVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDN 553
           +     L      L  GADV      + N T L  A    S+    FLL +   VN  D+
Sbjct: 207 SGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS 266

Query: 554 KGCTPLHCAIVGNQLEVFNHLINSNAD--ITMYKNDSPLHLACATGNMDMIT 603
            G  PLH A +     +    +   AD      +   PL +A  T N D++T
Sbjct: 267 AGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVT 318

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 51.3 bits (122), Expect = 9e-07
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 1/94 (1%)

Query: 792 LLSSCRQGLYEIVDTLLEYNADTNLRT-IKHGSTALHTAAFHNQLDIIKLLLKYNADINA 850
             +S        +   L + AD N     +  +T L  A   N L   + LL+  A++N 
Sbjct: 204 FRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ 263

Query: 851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKA 884
            D  G+   H A    +  +    L  G+++   
Sbjct: 264 ADSAGRGPLHHATILGHTGLACLFLKRGADLGAR 297

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 49.0 bits (116), Expect = 4e-06
 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 3/93 (3%)

Query: 614 ENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE 673
                 TPL  A +   L A +FLL     +VN     G   L  A       L  + L+
Sbjct: 231 GGQDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPLHHATILGHTGLACLFLK 289

Query: 674 ANADVNLGDGT-YTPLYTALMKDPSLDIIKMLV 705
             AD+   D     PL  A M+  + DI+ +L 
Sbjct: 290 RGADLGARDSEGRDPLTIA-METANADIVTLLR 321

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 48.6 bits (115), Expect = 5e-06
 Identities = 37/196 (18%), Positives = 60/196 (30%), Gaps = 17/196 (8%)

Query: 137 KTPAEKNSQAKTNGVPTKKPKVTQDQWNIVTVSDKKETSKNPQSSDSNSDKALE-EELTN 195
           +    +  + +  G P   PK +         S  +  S++  S    +          +
Sbjct: 153 EIRGRRGGRGRPRGQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPS 212

Query: 196 IFKKFDLLEHPEYL----SHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNY 251
           +    D L H   +            L  A         + L+  G  +N  D       
Sbjct: 213 LPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS------ 266

Query: 252 SRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLL 311
                    PLH A +     L  L L++GA+      S  R  L +A    + DIV LL
Sbjct: 267 -----AGRGPLHHATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLL 320

Query: 312 FDYGAEKSVNVQNVAG 327
                 ++   Q  AG
Sbjct: 321 RLAKMREAEAAQGQAG 336

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 48.2 bits (114), Expect = 9e-06
 Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 3/92 (3%)

Query: 481 IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVS 540
           ++  +      TP+  A   N L     LL+ GA+V     +    LH A       +  
Sbjct: 226 VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLAC 285

Query: 541 FLLSHIGVNLQ--DNKGCTPLHCAIVGNQLEV 570
             L   G +L   D++G  PL  A+     ++
Sbjct: 286 LFLKR-GADLGARDSEGRDPLTIAMETANADI 316

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 61.4 bits (148), Expect = 1e-09
 Identities = 92/743 (12%), Positives = 204/743 (27%), Gaps = 261/743 (35%)

Query: 187 KALEEELTNIFKK--FD-LLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLN-- 241
           K +++   +I  K   D ++   + +S     + L W L  K+ ++ +  V++ + +N  
Sbjct: 36  KDVQDMPKSILSKEEIDHIIMSKDAVS--GTLR-LFWTLLSKQEEMVQKFVEEVLRINYK 92

Query: 242 -LVDK-----GVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTA 295
            L+         P   +R  IE    L+    N +    K  + +    L +     R A
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDRLY----NDNQVFAKYNVSRLQPYLKL-----RQA 143

Query: 296 LHVAAIVESVDIVKLLFDYG---AEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
           L        +   K +   G   + K+    +V         C     ++   +  K   
Sbjct: 144 L------LELRPAKNVLIDGVLGSGKTWVALDV---------CLSY--KVQCKMDFKIFW 186

Query: 353 INSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLL 412
           +N  N        C   +  LE+   L         P     + H ++    +  +   L
Sbjct: 187 LNLKN--------CNSPETVLEMLQKL----LYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234

Query: 413 KHININHQDK-------DGWTPLTCSIKGQASLEVFHSIIEAGADIKAK-LMDGTTALHL 464
           + +  +   +       +                 F        ++  K L+  TT    
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKA--------WNAF--------NLSCKILL--TTR--- 273

Query: 465 ACYFGNLAMVNYL----VKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKM 520
                   + ++L      HI ++  + +  TP          E+ +LLLK         
Sbjct: 274 -----FKQVTDFLSAATTTHISLD-HHSMTLTP---------DEVKSLLLK--------- 309

Query: 521 KSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNAD 580
                 L    +    E+++                 P   +I+   +       ++   
Sbjct: 310 -----YLDCRPQDLPREVLT---------------TNPRRLSIIAESIRDGLATWDN--- 346

Query: 581 ITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNT 640
              +K+           N D +T  ++                       L  ++     
Sbjct: 347 ---WKHV----------NCDKLTTIIE---------------------SSLNVLE----- 367

Query: 641 KNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDI 700
                         A +   +D    L  +        ++     + ++  ++K   + +
Sbjct: 368 -------------PAEYRKMFD---RLS-VFPP---SAHIPTILLSLIWFDVIKSDVMVV 407

Query: 701 IKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIA---RFLVEE-------CNADITL 750
           +  L KY   V    +      P  Y   +    +     R +V+         + D+  
Sbjct: 408 VNKLHKYSL-VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP 466

Query: 751 RNFNN-------------RTALNFAAFGNN-LDLLKFL------------LKAGADPDIL 784
              +                      F    LD  +FL                    + 
Sbjct: 467 PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD-FRFLEQKIRHDSTAWNASGSILNTLQ 525

Query: 785 DLK-------DTSPLLSSCRQGLYEIVDTLLEY--NADTNLRTIKHGSTALHTAAFHNQL 835
            LK       D  P           +V+ +L++    + NL   K+              
Sbjct: 526 QLKFYKPYICDNDPKYE-------RLVNAILDFLPKIEENLICSKY-------------T 565

Query: 836 DIIKLLLKYNADINAEDKYGKIA 858
           D++++ L    +   E+ + ++ 
Sbjct: 566 DLLRIALMAEDEAIFEEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.9 bits (139), Expect = 2e-08
 Identities = 62/489 (12%), Positives = 140/489 (28%), Gaps = 161/489 (32%)

Query: 78  RMVKEKLGEMDSNEENEEEEEEERGGKRSKKRKRKAQETL-DLDDLGDIVAGRKGNWSIT 136
           ++        D +   +      +   R   + +  +  L  L ++           +  
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV----------QN-- 255

Query: 137 KTPAEK-NSQAKTNGVPTKKPKVTQDQWNIVTVSDKKETSKNPQSSDSNSDKALEEELTN 195
                  N   K   + T+  +VT    + ++ +          S D +S     +E+ +
Sbjct: 256 AKAWNAFNLSCKIL-LTTRFKQVT----DFLSAATTTHI-----SLDHHSMTLTPDEVKS 305

Query: 196 IFKKF------DLLE-----HP-----------EYLSHSQGYKALCWALQEKKTDIAKLL 233
           +  K+      DL       +P           + L+    +K +     +K T I +  
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHV---NCDKLTTIIESS 362

Query: 234 VDKGVPLNLVDKGVPLNYSRR-----IIETDTPLHSAIL-----NSDIELVKLLLEKGAN 283
           ++    L       P  Y +      +      + + +L     +     V +++ K   
Sbjct: 363 LNV---LE------PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413

Query: 284 PLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIV 343
              +EK    + +          I  +  +           +     LH    R  ++  
Sbjct: 414 YSLVEKQPKESTIS---------IPSIYLEL-------KVKLENEYALH----RSIVDHY 453

Query: 344 KILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFG 403
            I   K  D      D   P           +  Y  +H              H+     
Sbjct: 454 NIP--KTFD-----SDDLIP---------PYLDQYFYSH-----------IGHHL-KNIE 485

Query: 404 NLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALH 463
           + E +  L + + ++      +                         ++ K+   +TA +
Sbjct: 486 HPERMT-LFRMVFLD----FRF-------------------------LEQKIRHDSTAWN 515

Query: 464 LACYFGN-LAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKS 522
            +    N L  + +   +I    +ND    P Y  + N    I + L K+  ++   + S
Sbjct: 516 ASGSILNTLQQLKFYKPYI---CDND----PKYERLVN---AILDFLPKIEENL---ICS 562

Query: 523 NFTCL-HVA 530
            +T L  +A
Sbjct: 563 KYTDLLRIA 571

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 20/83 (24%)

Query: 62  IKRGPRLHKEIDSAVE-RMVKEK-LGEMDSNEENEEEEEEERGGK--------------R 105
           I +  RL +E +S  + R  + K L E+D+  +  E+E  E+  K              +
Sbjct: 74  IAQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEK 133

Query: 106 SKKRKRKAQETL--DLDDLGDIV 126
           +K   R A +      D   DI+
Sbjct: 134 NKINNRIADKAFYQQPDA--DII 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	1011
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.98
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
2pnn_A	273	Transient receptor potential cation channel subfa	99.96
2etb_A	256	Transient receptor potential cation channel subfam	99.96
2etb_A	256	Transient receptor potential cation channel subfam	99.96
2pnn_A	273	Transient receptor potential cation channel subfa	99.96
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.95
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.95
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.95
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.95
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.95
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.95
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.94
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.94
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.94
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.94
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.94
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.94
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.94
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.94
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.94
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.94
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.94
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.94
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.94
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.93
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.93
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.93
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.93
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.93
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.93
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.92
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.92
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.92
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.92
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.92
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.9
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.9
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.89
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.89
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.88
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.88
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.87
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.87
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.86
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.86
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.84
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.83
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.83
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.83
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.83
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.83
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.83
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.83
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.83
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.8
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.8
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.8
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.79
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.79
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.78
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.78
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.76
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.76
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.75
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.74
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.62
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.59

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=7.2e-58  Score=529.88  Aligned_cols=396  Identities=28%  Similarity=0.365  Sum_probs=304.4

Q ss_pred             cCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCC
Q psy8109         447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFT  525 (1011)
Q Consensus       447 ~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t  525 (1011)
                      .|++++..+..|.||||+|+..|+.++|++|++ +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.|
T Consensus         3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t   82 (437)
T 1n11_A            3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQT   82 (437)
T ss_dssp             ------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCC
T ss_pred             CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCC
Confidence            567777777777777777777777777777777 6677777777777777777777777777777777777777777777


Q ss_pred             HHHHHHHhCCHHHHHHHHhc-cCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHH
Q psy8109         526 CLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITY  604 (1011)
Q Consensus       526 ~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~  604 (1011)
                      |||+|+..|+.+++++|+++ ++++..+..|.|||++|+..|+.+++++|++.+++.                       
T Consensus        83 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-----------------------  139 (437)
T 1n11_A           83 PLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ-----------------------  139 (437)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-----------------------
T ss_pred             HHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----------------------
Confidence            77777777777777777666 555566666666666666666666666666655432                       


Q ss_pred             HHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCC
Q psy8109         605 AMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT  684 (1011)
Q Consensus       605 Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~  684 (1011)
                             +..+..|.||||.|+..|+.+++++|++ .|++++..+..|.|||++|+..|+.+++++|+++|++++     
T Consensus       140 -------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----  206 (437)
T 1n11_A          140 -------ACMTKKGFTPLHVAAKYGKVRVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH-----  206 (437)
T ss_dssp             -------CCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSC-----
T ss_pred             -------cCCCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-----
Confidence                   2233456666666666666666666666 566666666666666666666666666666666555443     


Q ss_pred             CcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHh
Q psy8109         685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF  764 (1011)
Q Consensus       685 ~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~  764 (1011)
                                                  ..+..  |.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+.
T Consensus       207 ----------------------------~~~~~--g~t~L~~A~~~~~-~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~  254 (437)
T 1n11_A          207 ----------------------------SPAWN--GYTPLHIAAKQNQ-VEVARSLLQY-GGSANAESVQGVTPLHLAAQ  254 (437)
T ss_dssp             ----------------------------CCCTT--CCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHH
T ss_pred             ----------------------------CcCCC--CCCHHHHHHHcCC-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHH
Confidence                                        33333  7889999999998 8999999988 88899889999999999999


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhc
Q psy8109         765 GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKY  844 (1011)
Q Consensus       765 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~  844 (1011)
                      .|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+.++|++|+++
T Consensus       255 ~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~  333 (437)
T 1n11_A          255 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA-TTRMGYTPLHVASHYGNIKLVKFLLQH  333 (437)
T ss_dssp             TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCSSCCCHHHHHHHSSCSHHHHHHHHT
T ss_pred             CCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC-CCCCCCCHHHHHHHcCcHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999987 778899999999999999999999999


Q ss_pred             cCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhhcc
Q psy8109         845 NADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYV  911 (1011)
Q Consensus       845 ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~  911 (1011)
                      |+++|.+|..|+||||+|+..|+.++|++|+++|++++..|.+|.||+++|.+.|+.++++.+....
T Consensus       334 gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~  400 (437)
T 1n11_A          334 QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT  400 (437)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999999999999999888776543

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=2.2e-57  Score=525.74  Aligned_cols=393  Identities=27%  Similarity=0.349  Sum_probs=358.1

Q ss_pred             CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHH
Q psy8109         416 NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPI  494 (1011)
Q Consensus       416 ~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L  494 (1011)
                      +++..+..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..|+.+++++|++ +.+++..+..|.|||
T Consensus         6 ~~~~~~~~g~t~L~~Aa~~-g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L   84 (437)
T 1n11_A            6 SGGGGGESGLTPLHVASFM-GHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL   84 (437)
T ss_dssp             ---------CCHHHHHHHH-TCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHH
T ss_pred             CccccCCCCCCHHHHHHHC-CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Confidence            5677889999999995543 39999999999999999999999999999999999999999999 889999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc-cCCCCCCCCCCCHHHHHHhcCCHHHHHH
Q psy8109         495 YFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNH  573 (1011)
Q Consensus       495 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~g~t~L~~A~~~g~~eiv~~  573 (1011)
                      ++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++ ...+..+..|.|||+.|+..|+.+++++
T Consensus        85 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~  164 (437)
T 1n11_A           85 HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL  164 (437)
T ss_dssp             HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999998 7777888899999999999999999999


Q ss_pred             HHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCC
Q psy8109         574 LINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGS  653 (1011)
Q Consensus       574 Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~  653 (1011)
                      |++.|+++                              +..+..|.||||.|+..|+.+++++|++ .|.+++..+..|.
T Consensus       165 Ll~~g~~~------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~  213 (437)
T 1n11_A          165 LLERDAHP------------------------------NAAGKNGLTPLHVAVHHNNLDIVKLLLP-RGGSPHSPAWNGY  213 (437)
T ss_dssp             HHHTTCCT------------------------------TCCCSSCCCHHHHHHHTTCHHHHHHHGG-GTCCSCCCCTTCC
T ss_pred             HHhCCCCC------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCcCCCCC
Confidence            99988765                              4456779999999999999999999999 8999999999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCH
Q psy8109         654 TALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDC  733 (1011)
Q Consensus       654 t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~  733 (1011)
                      ||||+|+..|+.+++++|++.|++++..+.                                 .  |.||||+|+..|+ 
T Consensus       214 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~---------------------------------~--g~t~L~~A~~~g~-  257 (437)
T 1n11_A          214 TPLHIAAKQNQVEVARSLLQYGGSANAESV---------------------------------Q--GVTPLHLAAQEGH-  257 (437)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT---------------------------------T--CCCHHHHHHHTTC-
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCC---------------------------------C--CCCHHHHHHHCCC-
Confidence            999999999999999999998887764332                                 2  7889999999998 


Q ss_pred             HHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCC
Q psy8109         734 NDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD  813 (1011)
Q Consensus       734 ~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  813 (1011)
                      .+++++|++. +++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++|++|+++|++
T Consensus       258 ~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad  336 (437)
T 1n11_A          258 AEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD  336 (437)
T ss_dssp             HHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC
T ss_pred             HHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCC
Confidence            8999999988 899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109         814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG  878 (1011)
Q Consensus       814 ~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g  878 (1011)
                      ++. .+..|+||||+|+..|+.++|++|+++|++++.+|..|+|||++|++.|+.+++++|....
T Consensus       337 ~n~-~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~  400 (437)
T 1n11_A          337 VNA-KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT  400 (437)
T ss_dssp             TTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred             CCC-CCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence            997 7889999999999999999999999999999999999999999999999999999998654

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=7.8e-41  Score=372.45  Aligned_cols=297  Identities=24%  Similarity=0.301  Sum_probs=220.6

Q ss_pred             CCCHHHHHHhcCCHHHHHHHHhCCCCccccC---CCCHHHHHHHcCChhhHHHHHh-hccccccCCCCCcHHHHHHHcCC
Q psy8109         555 GCTPLHCAIVGNQLEVFNHLINSNADITMYK---NDSPLHLACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGC  630 (1011)
Q Consensus       555 g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~---~~t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~  630 (1011)
                      |.|+|+.|+..|++++|++|+++|++++..+   +.||||+|+..|+.++|++|++ +++++..+..+.++++.++..+.
T Consensus        25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~  104 (337)
T 4g8k_A           25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS  104 (337)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             CChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence            4567777777777777777777777765432   3355555555555555555555 45555555555555555555555


Q ss_pred             HHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCC
Q psy8109         631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGAD  710 (1011)
Q Consensus       631 ~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~  710 (1011)
                      ..++..++. .+.+++..+..|.|||++|+..|+.+++++|+++|++++.......                       +
T Consensus       105 ~~~~~~~~~-~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~-----------------------~  160 (337)
T 4g8k_A          105 VKLLKLFLS-KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-----------------------D  160 (337)
T ss_dssp             HHHHHHHHT-TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-------------------------
T ss_pred             chhhHHhhh-ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccc-----------------------c
Confidence            555555555 4555555555555555555555555555555555555543332100                       0


Q ss_pred             CCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC----HHHHHHHHHCCCCCCCCCc
Q psy8109         711 VNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN----LDLLKFLLKAGADPDILDL  786 (1011)
Q Consensus       711 ~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~----~~iv~~Ll~~gad~~~~d~  786 (1011)
                      ....+.  .|.||||+|+..|+ .+++++|+++.|++++..+..|.|+|+.++..++    ..++++|+++|++++.++.
T Consensus       161 ~~~~~~--~g~T~L~~A~~~g~-~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~  237 (337)
T 4g8k_A          161 QERLRK--GGATALMDAAEKGH-VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE  237 (337)
T ss_dssp             ---CTT--CSCCHHHHHHHHTC-HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCG
T ss_pred             cccccC--CCCcHHHHHHHCCC-HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCC
Confidence            011122  38999999999999 9999999988799999999999999998876543    4688999999999999999


Q ss_pred             CCCCcccccccCChHHHHHHHHHc-CCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHc
Q psy8109         787 KDTSPLLSSCRQGLYEIVDTLLEY-NADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQA  865 (1011)
Q Consensus       787 ~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~  865 (1011)
                      .|.||||+|+..|+.++|++|++. |++++. .+..|+||||+|+..|+.++|++|+++|+++|.+     +|||+|+..
T Consensus       238 ~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~-~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~  311 (337)
T 4g8k_A          238 RGKTPLILAVEKKHLGLVQRLLEQEHIEIND-TDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRN  311 (337)
T ss_dssp             GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHT
T ss_pred             CCCCHHHHHHHhhhhHHHHHHHHhcCCcccC-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHc
Confidence            999999999999999999999985 899998 8889999999999999999999999999998764     599999999


Q ss_pred             CCHHHHHHHHhcCCCcccc
Q psy8109         866 KNWDIVTFLLDAGSNIEKA  884 (1011)
Q Consensus       866 g~~~iv~~Ll~~ga~~~~~  884 (1011)
                      |+.++|++|+++||++|..
T Consensus       312 ~~~~iv~~Ll~~GA~~d~~  330 (337)
T 4g8k_A          312 YDHSLVKVLLSHGAKEDFH  330 (337)
T ss_dssp             TCHHHHHHHHHTTCCC---
T ss_pred             CCHHHHHHHHHCcCCCCCC
Confidence            9999999999999999853

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=1.7e-40  Score=369.67  Aligned_cols=282  Identities=30%  Similarity=0.414  Sum_probs=248.7

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR  336 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~  336 (1011)
                      .|.|||+.|+..|++++|++||++|++++..+...|+||||+|+..|+.++|++|+++|+  +++..+..+.++++.++.
T Consensus        24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga--~~~~~~~~~~~~~~~~~~  101 (337)
T 4g8k_A           24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA--DPVLRKKNGATPFILAAI  101 (337)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCC--chhhhccCCCchhHHHHh
Confidence            567999999999999999999999999998887669999999999999999999999999  789999999999999999


Q ss_pred             cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-----------CCCCcHHHHHHhcCCH
Q psy8109         337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-----------EGERTALHMASQFGNL  405 (1011)
Q Consensus       337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----------~~~~t~L~~Aa~~g~~  405 (1011)
                      .++..++..+++.+++++..+..|.|||++|+..|+.+++++|+++|++++..           ..|.||||+|+..|+.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~  181 (337)
T 4g8k_A          102 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV  181 (337)
T ss_dssp             HTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH
T ss_pred             cccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH
Confidence            99999999999999999999999999999999999999999999999998753           2468999999999999


Q ss_pred             HHHHHHHhc-c-CccCCCCCCCcHhHHHH-hc--CCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-
Q psy8109         406 EMVNYLLKH-I-NINHQDKDGWTPLTCSI-KG--QASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-  479 (1011)
Q Consensus       406 ~iv~~Ll~~-~-~~~~~~~~~~t~l~~a~-~~--~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-  479 (1011)
                      ++|++|+++ + +++..+..|.|+++.+. .+  .....++++|+++|++++.++..|.||||+|+..|+.+++++|++ 
T Consensus       182 ~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~  261 (337)
T 4g8k_A          182 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ  261 (337)
T ss_dssp             HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS
T ss_pred             HHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh
Confidence            999999975 4 88889999999998733 22  123468889999999999999999999999999999999999987 


Q ss_pred             -ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc
Q psy8109         480 -HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH  545 (1011)
Q Consensus       480 -~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  545 (1011)
                       +.+++..+..|+||||+|+..|+.++|++|+++|++++.     .+||++|+..|+.++|++|+++
T Consensus       262 ~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll~~  323 (337)
T 4g8k_A          262 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHSLVKVLLSH  323 (337)
T ss_dssp             TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHHHHHHHHHT
T ss_pred             cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHHHHHHHHHC
Confidence             678888999999999999999999999999999988753     2466666666665555555555

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=1.4e-39  Score=364.88  Aligned_cols=324  Identities=25%  Similarity=0.271  Sum_probs=271.5

Q ss_pred             CCcchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q psy8109         212 SQGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKS  290 (1011)
Q Consensus       212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~  290 (1011)
                      ..+.++|+.||..|+.+.|+.|+.. |++++..+.           .|.||||.|+..|+.++|++|+++|++++..+..
T Consensus        22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~-----------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~   90 (351)
T 3utm_A           22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDG-----------RKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG   90 (351)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSST-----------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred             cccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence            4567999999999999999988875 778777776           8999999999999999999999999999888776


Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy8109         291 RNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ  370 (1011)
Q Consensus       291 ~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~  370 (1011)
                       |.||||+|+..|+.++|++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.+|+++|+..
T Consensus        91 -g~t~L~~A~~~g~~~iv~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~  167 (351)
T 3utm_A           91 -GLVPLHNACSYGHYEVTELLLKHGA--CVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTP  167 (351)
T ss_dssp             -CCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSH
T ss_pred             -CCcHHHHHHHCCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhh
Confidence             9999999999999999999999999  7899999999999999999999999999999999999999999999999999


Q ss_pred             CChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcC--CCHHHHHHHHHc
Q psy8109         371 NCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQ--ASLEVFHSIIEA  447 (1011)
Q Consensus       371 g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~--~~~~i~~~Ll~~  447 (1011)
                      +..+.+.+....           .++..++..++.+.+..++... .....+..+.||||+++...  ...+++++|++.
T Consensus       168 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~  236 (351)
T 3utm_A          168 ELRERLTYEFKG-----------HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRK  236 (351)
T ss_dssp             HHHHHHHHHHHH-----------HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT
T ss_pred             hhHHHHHhhhcc-----------cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc
Confidence            988888887753           5788899999999999998876 33445677889999866542  358899999999


Q ss_pred             CCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCH
Q psy8109         448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTC  526 (1011)
Q Consensus       448 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~  526 (1011)
                      |++++..+..|.||||+|+..|+.+++++|++ +++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus       237 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~ta  316 (351)
T 3utm_A          237 GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTA  316 (351)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCh
Confidence            99999888899999999999999999999998 78888888899999999999999999999999999999888889998


Q ss_pred             HHHHHHhCCHHHHHHHHhccCCCCCCCCCCCHHHHHHhcC
Q psy8109         527 LHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGN  566 (1011)
Q Consensus       527 L~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g  566 (1011)
                      +++|    ..+++++|.+...  .....+.+++..|+..|
T Consensus       317 l~~a----~~~~~~~l~~~~~--~~~~~~~~~l~~A~~~g  350 (351)
T 3utm_A          317 AQMG----NEAVQQILSESTP--MRTSDVDYRLLEASKAG  350 (351)
T ss_dssp             HHHS----CHHHHHHHHHC---------------------
T ss_pred             hhhh----hHHHHHHHHhccc--cccCcceeehhhhhccC
Confidence            8886    6678888877622  22344556777777665

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=3.7e-39  Score=349.85  Aligned_cols=263  Identities=29%  Similarity=0.327  Sum_probs=239.1

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhhCCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHc
Q psy8109         617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHK-TKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMK  694 (1011)
Q Consensus       617 ~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~  694 (1011)
                      .|.|+|+.|+..|+.+++++|++ .|++++.. +..|.||||+|+..|+.+++++|+++|++++..+. +.|||+.|+. 
T Consensus         4 ~g~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-   81 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDVDLVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI-   81 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-
T ss_pred             ccchHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH-
Confidence            36788888888888888888888 78888877 77788888888888888888888888888887766 8888888888 


Q ss_pred             CCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccc----------cCCCccHHHHHHh
Q psy8109         695 DPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLR----------NFNNRTALNFAAF  764 (1011)
Q Consensus       695 ~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~----------~~~g~t~L~~Aa~  764 (1011)
                      .|+.+++++|+++|++++..+..  |.||||+|+..|+ .+++++|++. |++++..          +..|.||||.|+.
T Consensus        82 ~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~-~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~  157 (285)
T 1wdy_A           82 AGSVKLLKLFLSKGADVNECDFY--GFTAFMEAAVYGK-VKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAE  157 (285)
T ss_dssp             HTCHHHHHHHHHTTCCTTCBCTT--CCBHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCccCcc--cCCHHHHHHHhCC-HHHHHHHHHh-CCCcccccccHHHHHhhccCCCcHHHHHHH
Confidence            78888889988888888877776  8999999999999 8999999988 8888876          7789999999999


Q ss_pred             CCCHHHHHHHHHC-CCCCCCCCcCCCCcccccccCCh----HHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHH
Q psy8109         765 GNNLDLLKFLLKA-GADPDILDLKDTSPLLSSCRQGL----YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK  839 (1011)
Q Consensus       765 ~g~~~iv~~Ll~~-gad~~~~d~~g~t~L~~A~~~g~----~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~  839 (1011)
                      .|+.+++++|++. |++++..+..|.||||+|+..++    .+++++|+++|++++. .+..|.||||+|+..|+.++++
T Consensus       158 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~  236 (285)
T 1wdy_A          158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV-RGERGKTPLILAVEKKHLGLVQ  236 (285)
T ss_dssp             HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC-CCTTSCCHHHHHHHTTCHHHHH
T ss_pred             cCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHH
Confidence            9999999999998 99999999999999999999998    9999999999999997 7889999999999999999999


Q ss_pred             HHHh-ccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccc
Q psy8109         840 LLLK-YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK  886 (1011)
Q Consensus       840 ~Ll~-~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~  886 (1011)
                      +|++ .|++++.+|..|+||||+|+..|+.+++++|+++||+++..|.
T Consensus       237 ~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~  284 (285)
T 1wdy_A          237 RLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             HHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             HHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence            9998 8999999999999999999999999999999999999998763

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=1.2e-39  Score=365.46  Aligned_cols=334  Identities=22%  Similarity=0.180  Sum_probs=244.6

Q ss_pred             HhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc--cCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCC
Q psy8109         510 LKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH--IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND  587 (1011)
Q Consensus       510 l~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~--~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~  587 (1011)
                      .+.+++....+..+.++|+.|+..|+.+.++.|+..  .+++..+..|.||||+|+..|+.+++++|++.|+++      
T Consensus        11 ~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------   84 (351)
T 3utm_A           11 ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV------   84 (351)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------
T ss_pred             cCCceeeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------
Confidence            344444455556667788888888888887777765  556667777888888888888888888888877764      


Q ss_pred             CHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHH
Q psy8109         588 SPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDL  667 (1011)
Q Consensus       588 t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~i  667 (1011)
                                              +..+..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.++
T Consensus        85 ------------------------~~~~~~g~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~  139 (351)
T 3utm_A           85 ------------------------HAKDKGGLVPLHNACSYGHYEVTELLLK-HGACVNAMDLWQFTPLHEAASKNRVEV  139 (351)
T ss_dssp             ------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             ------------------------CccCCCCCcHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence                                    3445667788888888888888888887 788888888888888888888888888


Q ss_pred             HHHHHHCCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCC
Q psy8109         668 VEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNA  746 (1011)
Q Consensus       668 v~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~  746 (1011)
                      +++|+++|++++..+. +.++++.++. .+..+.+.+..              ..+++..++..++ .+.+..++.. +.
T Consensus       140 v~~Ll~~g~~~~~~~~~g~~~l~~a~~-~~~~~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~l~~-~~  202 (351)
T 3utm_A          140 CSLLLSHGADPTLVNCHGKSAVDMAPT-PELRERLTYEF--------------KGHSLLQAAREAD-LAKVKKTLAL-EI  202 (351)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHCSS-HHHHHHHHHHH--------------HHHHHHHHHHTTC-HHHHHHHTTT-CC
T ss_pred             HHHHHHcCCCCccccCCCCcchHHHhh-hhhHHHHHhhh--------------cccHHHHHHHhcc-HHHHHHHHHh-hc
Confidence            8888888888777666 6777777654 44445555443              2356777777777 6666766666 33


Q ss_pred             CcccccCCCccHHHHHHhC---CCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCC
Q psy8109         747 DITLRNFNNRTALNFAAFG---NNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGS  823 (1011)
Q Consensus       747 ~~~~~~~~g~t~L~~Aa~~---g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~  823 (1011)
                      .....+..|.||||+|+..   ++.+++++|++.|++++.++..|.||||+|+..|+.++|++|+++|++++. .+..|+
T Consensus       203 ~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~-~d~~g~  281 (351)
T 3utm_A          203 INFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNA-LDSLGQ  281 (351)
T ss_dssp             TTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSC
T ss_pred             ccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCC
Confidence            3334567788899999888   557888999999999988888899999999999999999999999988887 778889


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhC
Q psy8109         824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEK  899 (1011)
Q Consensus       824 t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  899 (1011)
                      ||||+|+..|+.++|++|+++|++++.+|..|+||+++|    +.+++++|.+.+...   ...+.+++..|++.|
T Consensus       282 t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~~---~~~~~~~l~~A~~~g  350 (351)
T 3utm_A          282 TALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPMR---TSDVDYRLLEASKAG  350 (351)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC----------------------
T ss_pred             CHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccccc---cCcceeehhhhhccC
Confidence            999999999999999999999999998898999988887    667888888876532   335567777777665

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=3e-38  Score=342.63  Aligned_cols=266  Identities=30%  Similarity=0.411  Sum_probs=187.2

Q ss_pred             CcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109         213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN  292 (1011)
Q Consensus       213 ~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g  292 (1011)
                      .|.|+|++|++.|+.++|++|++.|++++....          ..|.||||.|+..|+.++|++|+++|++++..+.. |
T Consensus         4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g   72 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEE----------EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN-G   72 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-C
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCcccccC----------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-C
Confidence            456777777777777777777777766655421          15667777777777777777777777666655544 6


Q ss_pred             CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccC----------CCCCCc
Q psy8109         293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSG----------NDDGCT  362 (1011)
Q Consensus       293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~----------~~~g~t  362 (1011)
                      .||||+|+..|+.+++++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..          +..|.|
T Consensus        73 ~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t  150 (285)
T 1wdy_A           73 ATPFLLAAIAGSVKLLKLFLSKGA--DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT  150 (285)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTC--CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCC--CCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCc
Confidence            677777777777777777777666  56666666777777777777777777777777666655          444555


Q ss_pred             HHHHHHHcCChhHHHHHHhc-CCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHH
Q psy8109         363 PLFCAIAQNCLEVFNYLVNH-GCDLSVP-EGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEV  440 (1011)
Q Consensus       363 ~L~~A~~~g~~~iv~~Ll~~-g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i  440 (1011)
                      ||++|+..|+.+++++|++. |++++.. ..+.|||+.|+..|+.+                             ...++
T Consensus       151 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~-----------------------------~~~~i  201 (285)
T 1wdy_A          151 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS-----------------------------DVEAI  201 (285)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTT-----------------------------THHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccc-----------------------------hHHHH
Confidence            55555555555555555554 5555444 34445555555444410                             01566


Q ss_pred             HHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh--ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCccccc
Q psy8109         441 FHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK--HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAV  518 (1011)
Q Consensus       441 ~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~--~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~  518 (1011)
                      +++|++.|++++..+..|.||||+|+..|+.+++++|++  +.+++..+..|.|||++|+..|+.+++++|+++|++++.
T Consensus       202 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~  281 (285)
T 1wdy_A          202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC  281 (285)
T ss_dssp             HHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred             HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence            677777888888888899999999999999999999997  678888999999999999999999999999999999877


Q ss_pred             cc
Q psy8109         519 KM  520 (1011)
Q Consensus       519 ~~  520 (1011)
                      .|
T Consensus       282 ~d  283 (285)
T 1wdy_A          282 GD  283 (285)
T ss_dssp             SS
T ss_pred             cc
Confidence            65

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=4.3e-39  Score=362.66  Aligned_cols=305  Identities=20%  Similarity=0.209  Sum_probs=127.2

Q ss_pred             HHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy8109         559 LHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLL  638 (1011)
Q Consensus       559 L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  638 (1011)
                      |..++..|+.+.++.++++..++.  ...+++..+...|+++++++++.    +..+..|.||||.|+..+. +++++|+
T Consensus        41 l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~g~t~L~~Aa~~~~-~~~~~L~  113 (373)
T 2fo1_E           41 LLEASYDGYIKRQRNELQHYSLYP--NPQGYGNGNDFLGDFNHTNLQIP----TEPEPESPIKLHTEAAGSY-AITEPIT  113 (373)
T ss_dssp             -----------------------------------------------------------CCCHHHHHHHSSS-CCCSCCS
T ss_pred             cccccCCccccchhhhhhhhcccc--CccccCCCCCccccccccccccc----cCCCCCCccHHHHHhcCCc-hHHHHhc
Confidence            334444555555555554443332  11223344555566666655543    2345566777777776443 5665554


Q ss_pred             hhCCCCcccCC-CCCCcHHHHHHHcCCHHHHHHHH--------HCCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCC
Q psy8109         639 NTKNIDVNHKT-KDGSTALFFACYDKRLDLVEILL--------EANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYG  708 (1011)
Q Consensus       639 ~~~g~~~~~~~-~~g~t~L~~A~~~g~~~iv~~Ll--------~~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g  708 (1011)
                      .   .+++..+ ..|.||||+|+..|+.+++++|+        +.|++++..+. +.||||.|+. .|+.+++++|+++|
T Consensus       114 ~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~-~g~~~iv~~Ll~~g  189 (373)
T 2fo1_E          114 R---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVL-ARRRRLVAYLMKAG  189 (373)
T ss_dssp             T---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHTT
T ss_pred             c---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHH-cChHHHHHHHHHCC
Confidence            3   3455565 56777777777777766666665        33333333332 3333333333 33333333333333


Q ss_pred             CCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcC---CCcccccCCCccHHHHHHhCC---CHHHHHHHHHCCCCCC
Q psy8109         709 ADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN---ADITLRNFNNRTALNFAAFGN---NLDLLKFLLKAGADPD  782 (1011)
Q Consensus       709 ~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g---~~~~~~~~~g~t~L~~Aa~~g---~~~iv~~Ll~~gad~~  782 (1011)
                      ++++..+..  |.||||+|+..|+ .+++++|++. +   ++++..+..|.||||+|+..|   +.+++++|+++|++++
T Consensus       190 a~~~~~~~~--g~t~L~~A~~~g~-~~~v~~Ll~~-~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~  265 (373)
T 2fo1_E          190 ADPTIYNKS--ERSALHQAAANRD-FGMMVYMLNS-TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVD  265 (373)
T ss_dssp             CCSCCCCTT--CCCHHHHHHHTTC-HHHHHHHTTS-HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSS
T ss_pred             CCCcccCCC--CCCHHHHHHHCCC-HHHHHHHHhc-CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcc
Confidence            333333333  4455555555555 4555555544 2   444445555555555555544   4555555555555544


Q ss_pred             C--------CCcCCCCcccccccCChHHHHHHHHHcC-CCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccC
Q psy8109         783 I--------LDLKDTSPLLSSCRQGLYEIVDTLLEYN-ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK  853 (1011)
Q Consensus       783 ~--------~d~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~  853 (1011)
                      .        .+..|.||||+|+..|+.++|++|+++| ++++. .+..|.||||+|+..|+.++|++|+++|++++.+|.
T Consensus       266 ~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~-~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~  344 (373)
T 2fo1_E          266 YDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK-QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDA  344 (373)
T ss_dssp             CCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred             cccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCC
Confidence            3        3334555555555555555555555443 45544 444555555555555555555555555555555555


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109         854 YGKIAFHSACQAKNWDIVTFLLDAGS  879 (1011)
Q Consensus       854 ~g~taL~~A~~~g~~~iv~~Ll~~ga  879 (1011)
                      .|+|||++|+..|+.++|++|+++|+
T Consensus       345 ~g~t~l~~A~~~g~~~iv~~Ll~~~a  370 (373)
T 2fo1_E          345 TDHTARQLAQANNHHNIVDIFDRCRP  370 (373)
T ss_dssp             SSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence            55555555555555555555555544

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=8.3e-38  Score=352.12  Aligned_cols=303  Identities=23%  Similarity=0.305  Sum_probs=184.6

Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHH
Q psy8109         217 ALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTAL  296 (1011)
Q Consensus       217 ~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L  296 (1011)
                      +|..|+..|+.+.++.++++..+++               ...+++..|...|+++++++++....+      ..|.|||
T Consensus        40 ~l~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~g~t~L   98 (373)
T 2fo1_E           40 SLLEASYDGYIKRQRNELQHYSLYP---------------NPQGYGNGNDFLGDFNHTNLQIPTEPE------PESPIKL   98 (373)
T ss_dssp             ---------------------------------------------------------------------------CCCHH
T ss_pred             ccccccCCccccchhhhhhhhcccc---------------CccccCCCCCccccccccccccccCCC------CCCccHH
Confidence            4555556777777777776554432               112345667777777777777655332      2277788


Q ss_pred             HHHHHhCCHHHHHHHHHcCCCCCCcccC-CCCCCHHHHHHhcCcHHHHHHHH--------HCCCCCccCCCCCCcHHHHH
Q psy8109         297 HVAAIVESVDIVKLLFDYGAEKSVNVQN-VAGLTPLHIACRRKCLEIVKILL--------DKGADINSGNDDGCTPLFCA  367 (1011)
Q Consensus       297 ~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~t~L~~Aa~~g~~~iv~~Ll--------~~ga~~n~~~~~g~t~L~~A  367 (1011)
                      |.|+..|+ +++++|+.  .  +++..+ ..|.||||+||..|+.++|++|+        +.|+++|..|..|.||||+|
T Consensus        99 ~~Aa~~~~-~~~~~L~~--~--~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A  173 (373)
T 2fo1_E           99 HTEAAGSY-AITEPITR--E--SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLA  173 (373)
T ss_dssp             HHHHHSSS-CCCSCCST--T--TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHH
T ss_pred             HHHhcCCc-hHHHHhcc--c--cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHH
Confidence            88877544 67776653  2  456666 67788888888888777666665        67888888888888888888


Q ss_pred             HHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc----CccCCCCCCCcHhHHHHhcCC--CHHH
Q psy8109         368 IAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI----NINHQDKDGWTPLTCSIKGQA--SLEV  440 (1011)
Q Consensus       368 ~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~----~~~~~~~~~~t~l~~a~~~~~--~~~i  440 (1011)
                      +..|+.++|++|+++|++++.. ..+.||||+|+..|+.+++++|++++    +++..+..|.||||+|+....  +.++
T Consensus       174 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~  253 (373)
T 2fo1_E          174 VLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVAS  253 (373)
T ss_dssp             HHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHH
T ss_pred             HHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHH
Confidence            8888888888888888877766 56678888888888888888888764    566667777777777555433  6777


Q ss_pred             HHHHHHcCCCccc--------ccCCCChHHHHHHHcCCHHHHHHHHh--ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy8109         441 FHSIIEAGADIKA--------KLMDGTTALHLACYFGNLAMVNYLVK--HIDINSENDLGKTPIYFAIKNNHLEIFNLLL  510 (1011)
Q Consensus       441 ~~~Ll~~g~~~~~--------~~~~g~t~L~~Aa~~g~~~iv~~Ll~--~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  510 (1011)
                      +++|++.|++++.        .+..|.||||+|+..|+.++|++|++  +.+++..+..|.||||+|+..|+.+++++|+
T Consensus       254 v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll  333 (373)
T 2fo1_E          254 AKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI  333 (373)
T ss_dssp             HHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred             HHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            7777777777664        44567777777777777777777776  3677777777777777777777777777777


Q ss_pred             hcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc
Q psy8109         511 KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH  545 (1011)
Q Consensus       511 ~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  545 (1011)
                      ++|++++..+..|.|||++|+..|+.+++++|+++
T Consensus       334 ~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~  368 (373)
T 2fo1_E          334 QQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC  368 (373)
T ss_dssp             HTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             HcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            77777777777777777777777777777777665

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=1e-36  Score=329.68  Aligned_cols=257  Identities=21%  Similarity=0.234  Sum_probs=152.8

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhhC----------CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-C
Q psy8109         616 DIGETPLHVAVSHGCLEAVKFLLNTK----------NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-T  684 (1011)
Q Consensus       616 ~~g~t~L~~A~~~g~~~iv~~Ll~~~----------g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~  684 (1011)
                      ..|.|++|+|+..|+.+.+..++...          ...++..+..|+||||+|+..|+.+++++|++.|++++..+. +
T Consensus        13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g   92 (285)
T 3d9h_A           13 GLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADH   92 (285)
T ss_dssp             -----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTC
T ss_pred             hHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence            34566777777776655555443311          112345566677777777777777777777776666665544 5


Q ss_pred             CcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHh
Q psy8109         685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF  764 (1011)
Q Consensus       685 ~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~  764 (1011)
                      .||||.|+. .|+.+++++|+++|++++..+..  |.||||+|+..|+ .+++++|++. |++++..+ .|.||||+|+.
T Consensus        93 ~t~L~~A~~-~g~~~~v~~Ll~~ga~~~~~~~~--g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~-~g~t~L~~A~~  166 (285)
T 3d9h_A           93 VSPLHEACL-GGHLSCVKILLKHGAQVNGVTAD--WHTPLFNACVSGS-WDCVNLLLQH-GASVQPES-DLASPIHEAAR  166 (285)
T ss_dssp             CCHHHHHHH-TTCHHHHHHHHHTTCCSSCCCTT--CCCHHHHHHHHTC-HHHHHHHHHT-TCCSSCSC-TTSCHHHHHHH
T ss_pred             CCHHHHHHH-CCcHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHcCH-HHHHHHHHHC-CCCCCCCC-CCCCHHHHHHH
Confidence            555555554 45555555555555555555544  6677777777777 6777777766 66665433 47777777777


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhc
Q psy8109         765 GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKY  844 (1011)
Q Consensus       765 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~  844 (1011)
                      .|+.+++++|++.|++++..+..|.||||+|+..|+.++|++|+++|++++.  +..|.||||+|+..|+.+++++|+++
T Consensus       167 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~  244 (285)
T 3d9h_A          167 RGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ--GKGQDSPLHAVVRTASEELACLLMDF  244 (285)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC--CBTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            7777777777777777777777777777777777777777777777777763  56677777777777777777777777


Q ss_pred             cCCcccccCCCCCHHHHHHHcCCHHHHHHHHhc-CCCcc
Q psy8109         845 NADINAEDKYGKIAFHSACQAKNWDIVTFLLDA-GSNIE  882 (1011)
Q Consensus       845 ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~-ga~~~  882 (1011)
                      |++++.+|..|+|||++|+  ++.+++++|+++ |+++.
T Consensus       245 gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~  281 (285)
T 3d9h_A          245 GADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLP  281 (285)
T ss_dssp             TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-----
T ss_pred             CCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCC
Confidence            7777777777777777777  345677777775 66554

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=3e-37  Score=347.47  Aligned_cols=271  Identities=19%  Similarity=0.219  Sum_probs=166.9

Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHH
Q psy8109         610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLY  689 (1011)
Q Consensus       610 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~  689 (1011)
                      +.+..|..|.||||.|+..|+.++|++|++ .|++++..+..|.||||+|+..|+.+++++|+++|++++.. .+.|||+
T Consensus        12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~g~t~L~   89 (364)
T 3ljn_A           12 NRIKSDDENMEKIHVAARKGQTDEVRRLIE-TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW-HGQKPIH   89 (364)
T ss_dssp             ----CCHHHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB-TTBCHHH
T ss_pred             CccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc-CCCCHHH
Confidence            456677888999999999999999999998 79999999999999999999999999999999998866542 3567777


Q ss_pred             HHHHcCCCHHHHHHHHhC----CCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhC
Q psy8109         690 TALMKDPSLDIIKMLVKY----GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFG  765 (1011)
Q Consensus       690 ~aa~~~~~~~iv~~Ll~~----g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~  765 (1011)
                      .|+. .++.+++++|+++    |++++...            ..... ..       ....+++..+..|.||||+|+..
T Consensus        90 ~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~------------~~~~~-~~-------~~~~~~~~~~~~g~t~L~~A~~~  148 (364)
T 3ljn_A           90 LAVM-ANKTDLVVALVEGAKERGQMPESLL------------NECDE-RE-------VNEIGSHVKHCKGQTALHWCVGL  148 (364)
T ss_dssp             HHHH-TTCHHHHHHHHHHHHHHTCCHHHHH------------TCCCC-CC-------EEEETTEEEEESCCCHHHHHHHS
T ss_pred             HHHH-cCCHHHHHHHHHhccccCCCHHHHH------------hhcch-Hh-------hhhhccccCCCCCCCHHHHHHHc
Confidence            7777 6777777777776    54443300            00000 00       00112222455555555555555


Q ss_pred             C--CHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCC-----ccccccCCCChHHHHHHHcCCHHHH
Q psy8109         766 N--NLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD-----TNLRTIKHGSTALHTAAFHNQLDII  838 (1011)
Q Consensus       766 g--~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-----~~~~~~~~g~t~L~~Aa~~g~~~iv  838 (1011)
                      |  +.++|++|+++|++++..+..|.||||+|+..|+.++|++|+++|++     ++. .+..|.||||+|+..|+.++|
T Consensus       149 g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v  227 (364)
T 3ljn_A          149 GPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY-ANKQGNSHLHWAILINWEDVA  227 (364)
T ss_dssp             CGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC-CCTTCCCTTHHHHTTTCHHHH
T ss_pred             CCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc-cCCCCCcHHHHHHHcCCHHHH
Confidence            5  55555555555555555555555555555555555555555555555     444 445555555555555555555


Q ss_pred             HHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCccc------------ccccCCCHHhhHHhhCCHHHH
Q psy8109         839 KLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEK------------ATKYRMTFESSKVVEKHVAKL  904 (1011)
Q Consensus       839 ~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~------------~~~~g~t~l~~a~~~~~~~~~  904 (1011)
                      ++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.            .+..++|++++|+..|+.+.+
T Consensus       228 ~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v  305 (364)
T 3ljn_A          228 MRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEV  305 (364)
T ss_dssp             HHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHH
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHH
Confidence            555555555555555555555555555555555555555554322            344555555555555544443

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=4.8e-37  Score=345.82  Aligned_cols=228  Identities=17%  Similarity=0.195  Sum_probs=195.5

Q ss_pred             CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCC
Q psy8109         642 NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYM  721 (1011)
Q Consensus       642 g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~  721 (1011)
                      +.+++..+..|.||||+|+..|+.+++++|++.|++++..+.                                 .  |.
T Consensus        10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~---------------------------------~--g~   54 (364)
T 3ljn_A           10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR---------------------------------F--GC   54 (364)
T ss_dssp             ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT---------------------------------T--CC
T ss_pred             CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC---------------------------------C--CC
Confidence            445566777788888888888888888888887777665433                                 2  77


Q ss_pred             cHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHC----CCCCCC--------------
Q psy8109         722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKA----GADPDI--------------  783 (1011)
Q Consensus       722 t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~----gad~~~--------------  783 (1011)
                      ||||+|+..|+ .+++++|++. |++++  +..|.||||+|+..|+.++|++|++.    |++++.              
T Consensus        55 t~L~~A~~~g~-~~~v~~Ll~~-g~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (364)
T 3ljn_A           55 TALHLACKFGC-VDTAKYLASV-GEVHS--LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIG  130 (364)
T ss_dssp             CHHHHHHHHCC-HHHHHHHHHH-CCCCC--CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEET
T ss_pred             cHHHHHHHcCC-HHHHHHHHHC-CCCcc--ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhc
Confidence            77888888887 7888888877 66544  34688888888888888888888888    777766              


Q ss_pred             ---CCcCCCCcccccccCC--hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCC-----cccccC
Q psy8109         784 ---LDLKDTSPLLSSCRQG--LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD-----INAEDK  853 (1011)
Q Consensus       784 ---~d~~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~-----in~~d~  853 (1011)
                         .+..|.||||+|+..|  +.++|++|+++|++++. .+..|.||||+|+..|+.++|++|+++|++     +|.+|.
T Consensus       131 ~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~  209 (364)
T 3ljn_A          131 SHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA-KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK  209 (364)
T ss_dssp             TEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT
T ss_pred             cccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC
Confidence               8889999999999999  99999999999999998 788999999999999999999999999999     999999


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhh
Q psy8109         854 YGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANI  909 (1011)
Q Consensus       854 ~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~  909 (1011)
                      .|+||||+|+..|+.++|++|+++|++++..|..|.|||++|+..|+.++++.+..
T Consensus       210 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~  265 (364)
T 3ljn_A          210 QGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQ  265 (364)
T ss_dssp             TCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHH
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999998644

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.6e-36  Score=322.80  Aligned_cols=251  Identities=26%  Similarity=0.341  Sum_probs=185.4

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCC----------CcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCC
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGAN----------PLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVA  326 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~----------~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~  326 (1011)
                      .|.|+||+|+..|+.+.+..++..+..          .....+..|+||||+|+..|+.++|++|+++|+  +++..+..
T Consensus        14 ~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~~~~   91 (285)
T 3d9h_A           14 LVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW--AVNIITAD   91 (285)
T ss_dssp             ----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC--CSCEECTT
T ss_pred             HHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCC
Confidence            688999999999998777776654321          122234459999999999999999999999998  78999999


Q ss_pred             CCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHH
Q psy8109         327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLE  406 (1011)
Q Consensus       327 g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~  406 (1011)
                      |.||||+|+..|+.++|++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++....+.|||++|+..|+.+
T Consensus        92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~  171 (285)
T 3d9h_A           92 HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVE  171 (285)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHH
T ss_pred             CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999987777889999999999888


Q ss_pred             HHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCC
Q psy8109         407 MVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINS  485 (1011)
Q Consensus       407 iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~  485 (1011)
                      ++++|++.                                 |++++..+..|.||||+|+..|+.+++++|++ +++++.
T Consensus       172 ~v~~Ll~~---------------------------------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~  218 (285)
T 3d9h_A          172 CVNSLIAY---------------------------------GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ  218 (285)
T ss_dssp             HHHHHHHT---------------------------------TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHHC---------------------------------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC
Confidence            88887764                                 55556666677777777777777777777777 566663


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc
Q psy8109         486 ENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH  545 (1011)
Q Consensus       486 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  545 (1011)
                       +..|.|||++|+..|+.+++++|+++|++++..+..|.|||++|+  ++.+++++|+++
T Consensus       219 -~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~  275 (285)
T 3d9h_A          219 -GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLER  275 (285)
T ss_dssp             -CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred             -CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence             666777777777777777777777777777777777777777776  345667777665

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=8.9e-36  Score=316.68  Aligned_cols=241  Identities=23%  Similarity=0.271  Sum_probs=157.8

Q ss_pred             CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCcc-CCCCCCCc
Q psy8109         644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLT-NEACYYMT  722 (1011)
Q Consensus       644 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~-~~~~~~~t  722 (1011)
                      ++|.++..|.||||+|+..|+.-.+      +             . .+...++.+++++|++.|++++.. +..  |.|
T Consensus         2 dvn~~d~~g~tpL~~A~~~g~~~~~------~-------------~-~~~~~~~~~~v~~Ll~~g~~~~~~~d~~--g~t   59 (253)
T 1yyh_A            2 DVNVRGPDGFTPLMIASCSGGGLET------G-------------N-SEEEEDAPAVISDFIYQGASLHNQTDRT--GET   59 (253)
T ss_dssp             ----------------------------------------------------------------------CCCTT--SCC
T ss_pred             CCCCCCCCCCcHHHHHHhccccccc------c-------------c-hhhcCCChHHHHHHHHccCCcccccCCC--CCc
Confidence            4566777777777777766531000      0             0 011255666677777776666433 333  788


Q ss_pred             HHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCC-CCCCCCcCCCCcccccccCChH
Q psy8109         723 PLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA-DPDILDLKDTSPLLSSCRQGLY  801 (1011)
Q Consensus       723 ~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga-d~~~~d~~g~t~L~~A~~~g~~  801 (1011)
                      |||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+..|+.
T Consensus        60 ~L~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~  137 (253)
T 1yyh_A           60 ALHLAARYSR-SDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE  137 (253)
T ss_dssp             HHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCS
T ss_pred             HHHHHHHcCC-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChH
Confidence            8888888888 8888888887 88888888888888888888888888888888876 7888888888888888888888


Q ss_pred             HHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109         802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI  881 (1011)
Q Consensus       802 ~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~  881 (1011)
                      +++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus       138 ~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~  216 (253)
T 1yyh_A          138 GMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR  216 (253)
T ss_dssp             SHHHHHHHTTCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred             HHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence            888888888888886 6677888888888888888888888888888888888888888888888888888888888888


Q ss_pred             ccccccCCCHHhhHHhhCCHHHHHHhhh
Q psy8109         882 EKATKYRMTFESSKVVEKHVAKLRAANI  909 (1011)
Q Consensus       882 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~  909 (1011)
                      +..|..|.||+++|+..|+.++++.+..
T Consensus       217 ~~~d~~g~tpl~~A~~~g~~~i~~~l~~  244 (253)
T 1yyh_A          217 DITDHMDRLPRDIAQERMHHDIVRLLDL  244 (253)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred             cccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence            8888888888888888888888877643

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=2.5e-35  Score=313.19  Aligned_cols=216  Identities=22%  Similarity=0.188  Sum_probs=183.2

Q ss_pred             HHHcCCHHHHHHHHHCCCCCcCC-CC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHH
Q psy8109         659 ACYDKRLDLVEILLEANADVNLG-DG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI  736 (1011)
Q Consensus       659 A~~~g~~~iv~~Ll~~ga~~~~~-~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~i  736 (1011)
                      +...++.+++++|++.|++++.. +. +.||||.|+. .|+.+++++|+++|++++..+..  |.||||+|+..|+ .++
T Consensus        30 ~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~-~~~  105 (253)
T 1yyh_A           30 EEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAAR-YSRSDAAKRLLEASADANIQDNM--GRTPLHAAVSADA-QGV  105 (253)
T ss_dssp             ----------------------CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTC-HHH
T ss_pred             hhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHH-cCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcCC-HHH
Confidence            55678999999999999998754 33 8999999998 99999999999999999998877  9999999999999 999


Q ss_pred             HHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccc
Q psy8109         737 ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL  816 (1011)
Q Consensus       737 v~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~  816 (1011)
                      +++|++....+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus       106 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~  185 (253)
T 1yyh_A          106 FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM  185 (253)
T ss_dssp             HHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            99999995559999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109         817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS  879 (1011)
Q Consensus       817 ~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga  879 (1011)
                       .+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+|+++|.....
T Consensus       186 -~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~  247 (253)
T 1yyh_A          186 -QNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH  247 (253)
T ss_dssp             -CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred             -cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence             78899999999999999999999999999999999999999999999999999999997643

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=7.8e-35  Score=307.30  Aligned_cols=186  Identities=26%  Similarity=0.266  Sum_probs=106.6

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCC----CCCCCCcCCCCccccc
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA----DPDILDLKDTSPLLSS  795 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga----d~~~~d~~g~t~L~~A  795 (1011)
                      |.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|++.|+    +++..+..|.||||+|
T Consensus        46 g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A  123 (241)
T 1k1a_A           46 RQTPLHLAVITTL-PSVVRLLVTA-GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVA  123 (241)
T ss_dssp             SCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHH
T ss_pred             CCCHHHHHHHcCC-HHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHH
Confidence            4455555555554 4555555554 45555555555555555555555555555555554    4555555555555555


Q ss_pred             ccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHH
Q psy8109         796 CRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL  875 (1011)
Q Consensus       796 ~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll  875 (1011)
                      +..|+.+++++|+++|++++......|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus       124 ~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  203 (241)
T 1k1a_A          124 VNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLV  203 (241)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            55555555555555555555422245666666666666666666666666666666666666666666666666666666


Q ss_pred             hcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109         876 DAGSNIEKATKYRMTFESSKVVEKHVAKLRAA  907 (1011)
Q Consensus       876 ~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  907 (1011)
                      ++|++++..|..|.||+++|+..|+.++++.+
T Consensus       204 ~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l  235 (241)
T 1k1a_A          204 RSGADSSLKNCHNDTPLMVARSRRVIDILRGK  235 (241)
T ss_dssp             HTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred             hcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhh
Confidence            66666666666666666666666666655543

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=3.5e-34  Score=301.38  Aligned_cols=221  Identities=22%  Similarity=0.322  Sum_probs=135.9

Q ss_pred             CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcH
Q psy8109         644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTP  723 (1011)
Q Consensus       644 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~  723 (1011)
                      +++..+..|.||||+|+..|+.+++++|+++|++++..+.                                 .  |.||
T Consensus         3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~---------------------------------~--g~t~   47 (237)
T 3b7b_A            3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE---------------------------------D--QRTP   47 (237)
T ss_dssp             CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT---------------------------------T--CCCH
T ss_pred             CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCC---------------------------------C--CCCH
Confidence            4455566666666666666666666666666555543322                                 1  4455


Q ss_pred             HHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCC-CCCCCCCcCCCCcccccccCChHH
Q psy8109         724 LHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG-ADPDILDLKDTSPLLSSCRQGLYE  802 (1011)
Q Consensus       724 l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~L~~A~~~g~~~  802 (1011)
                      ||+|+..|+ .+++++|++. |++++..+..|.||||.|+..|+.+++++|++.| ++++..+..|.||||+|+..|+.+
T Consensus        48 L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~  125 (237)
T 3b7b_A           48 LMEAAENNH-LEAVKYLIKA-GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD  125 (237)
T ss_dssp             HHHHHHTTC-HHHHHHHHTT-TCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHhCC-HHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH
Confidence            555555555 5555555554 5555555555556666666666666666666555 555555555666666666666666


Q ss_pred             HHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy8109         803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE  882 (1011)
Q Consensus       803 iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~  882 (1011)
                      ++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus       126 ~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~  204 (237)
T 3b7b_A          126 LVKLLLSKGSDINI-RDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT  204 (237)
T ss_dssp             HHHHHHHTTCCTTC-CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred             HHHHHHHCCCCCCc-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence            66666666666654 45566666666666666666666666666666666666666666666666666666666666666


Q ss_pred             cccccCCCHHhhHHhhCCHH
Q psy8109         883 KATKYRMTFESSKVVEKHVA  902 (1011)
Q Consensus       883 ~~~~~g~t~l~~a~~~~~~~  902 (1011)
                      ..|..|.|||++|+..++..
T Consensus       205 ~~d~~g~t~l~~A~~~~~~~  224 (237)
T 3b7b_A          205 LKNKEGETPLQCASLNSQVW  224 (237)
T ss_dssp             CCCTTSCCHHHHSCTTCHHH
T ss_pred             ccCCCCCCHHHHHHHHHHHH
Confidence            66666666666666666653

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=1.5e-34  Score=302.97  Aligned_cols=227  Identities=27%  Similarity=0.357  Sum_probs=189.1

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCC
Q psy8109         617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDP  696 (1011)
Q Consensus       617 ~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~  696 (1011)
                      .+.+||+.|+..|+.+++++|+...+..++..+..|.||||+|+..|+.+++++|++.|++++..+.             
T Consensus         5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-------------   71 (231)
T 3aji_A            5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD-------------   71 (231)
T ss_dssp             CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-------------
T ss_pred             cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCC-------------
Confidence            4678888888888888888888855556777788888888888888888888888887776654332             


Q ss_pred             CHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109         697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK  776 (1011)
Q Consensus       697 ~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  776 (1011)
                                          .  |.||||+|+..|+ .+++++|++. |++++.++..|.||||+|+..|+.+++++|++
T Consensus        72 --------------------~--g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~  127 (231)
T 3aji_A           72 --------------------A--GWSPLHIAASAGX-DEIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE  127 (231)
T ss_dssp             --------------------T--SCCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             --------------------C--CCCHHHHHHHcCH-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence                                2  7788888888888 7888888887 88888888888888888888888888888888


Q ss_pred             CCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC
Q psy8109         777 AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK  856 (1011)
Q Consensus       777 ~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~  856 (1011)
                      +|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus       128 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~  206 (231)
T 3aji_A          128 GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI-QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK  206 (231)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred             cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc-cCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Confidence            8888888888888888888888888888888888888887 677888899999988889999999888888888888889


Q ss_pred             CHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109         857 IAFHSACQAKNWDIVTFLLDAGSNI  881 (1011)
Q Consensus       857 taL~~A~~~g~~~iv~~Ll~~ga~~  881 (1011)
                      |||++|+..++.+++++|+++|+++
T Consensus       207 t~l~~A~~~~~~~i~~lL~~~~a~i  231 (231)
T 3aji_A          207 TPLQVAKGGLGLILKRLAEGEEASM  231 (231)
T ss_dssp             CHHHHSCHHHHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHhhHHHHHHHHHccccccC
Confidence            9999988888888888888887753

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=7.8e-35  Score=315.32  Aligned_cols=263  Identities=21%  Similarity=0.130  Sum_probs=170.0

Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCC---cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcH
Q psy8109         612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNID---VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTP  687 (1011)
Q Consensus       612 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~---~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~  687 (1011)
                      +..|..|.||||.|+..|+.+++++|++ .|++   ++..+..|.||||+|+..|+.+++++|+++|++++..+. +.||
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp   81 (282)
T 1oy3_D            3 GYVTEDGDTALHLAVIHQHEPFLDFLLG-FSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA   81 (282)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHH-HHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred             CccCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence            4566777788888888888888888877 5665   677777778888888888888888888888877777665 7777


Q ss_pred             HHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC
Q psy8109         688 LYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN  767 (1011)
Q Consensus       688 L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~  767 (1011)
                      ||.|+. .++.+++++|+++|++.......    +.+  .               .   ........+.++++.++..+.
T Consensus        82 L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~----~~~--~---------------~---~~~~~~~~~~~~~~~~~~~~~  136 (282)
T 1oy3_D           82 LHLACR-VRAHTCACVLLQPRPSHPRDASD----TYL--T---------------Q---SQDCTPDTSHAPAAVDSQPNP  136 (282)
T ss_dssp             HHHHTT-TTCHHHHHHHSSSCCSSCCCC----------------------------------------------------
T ss_pred             HHHHHH-cCCcchhHhhhccCCCCchhhHH----HHh--h---------------c---ccccCcchhcchhhhcccccc
Confidence            777776 67777777777777664432211    000  0               0   001112234455555544433


Q ss_pred             H-HHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccC
Q psy8109         768 L-DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA  846 (1011)
Q Consensus       768 ~-~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga  846 (1011)
                      . .+...+...+++++..+..|.||||+|+..|+.++|++|+++|++++...+..|+||||+|+..|+.++|++|+++|+
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga  216 (282)
T 1oy3_D          137 ENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA  216 (282)
T ss_dssp             -------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             chhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence            2 333444455677777788888888888888888888888888888887444558899999999999999999999999


Q ss_pred             CcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCC
Q psy8109         847 DINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKH  900 (1011)
Q Consensus       847 ~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~  900 (1011)
                      +++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.....
T Consensus       217 d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~  270 (282)
T 1oy3_D          217 DPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD  270 (282)
T ss_dssp             CTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred             CCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence            999999999999999999999999999999999999999999999998876554

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=5.8e-34  Score=299.71  Aligned_cols=194  Identities=29%  Similarity=0.321  Sum_probs=184.7

Q ss_pred             CCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCC
Q psy8109         710 DVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT  789 (1011)
Q Consensus       710 ~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~  789 (1011)
                      +++..+..  |.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.
T Consensus         3 ~~~~~~~~--g~t~L~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~   78 (237)
T 3b7b_A            3 NFKMEHQN--KRSPLHAAAEAGH-VDICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGS   78 (237)
T ss_dssp             CCCCSSCC--SCCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSC
T ss_pred             CcccccCC--CCCHHHHHHHcCc-HHHHHHHHHc-CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCC
Confidence            34445555  9999999999999 9999999999 999999999999999999999999999999999999999999999


Q ss_pred             CcccccccCChHHHHHHHHHcC-CCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCH
Q psy8109         790 SPLLSSCRQGLYEIVDTLLEYN-ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW  868 (1011)
Q Consensus       790 t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~  868 (1011)
                      ||||+|+..|+.+++++|+++| .+++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus        79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~  157 (237)
T 3b7b_A           79 TCLHLAAKKGHYEVVQYLLSNGQMDVNC-QDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV  157 (237)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTTTCCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH
Confidence            9999999999999999999999 78876 778999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhh
Q psy8109         869 DIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAAN  908 (1011)
Q Consensus       869 ~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~  908 (1011)
                      +++++|+++|++++..|..|.||||+|+..++.++++.+-
T Consensus       158 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  197 (237)
T 3b7b_A          158 DIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFL  197 (237)
T ss_dssp             HHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHH
Confidence            9999999999999999999999999999999999998864

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=1.1e-34  Score=314.25  Aligned_cols=230  Identities=21%  Similarity=0.239  Sum_probs=171.6

Q ss_pred             cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHH
Q psy8109         645 VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPL  724 (1011)
Q Consensus       645 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l  724 (1011)
                      ++..+..|.||||+|+..|+.+++++|++.|++++.                              ++..+..  |.|||
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------------------~~~~~~~--g~t~L   49 (282)
T 1oy3_D            2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEY------------------------------LDLQNDL--GQTAL   49 (282)
T ss_dssp             CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGG------------------------------GGCCCTT--SCCHH
T ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc------------------------------ccccCCC--CCCHH
Confidence            356788889999999999998888888887776321                              1122222  67777


Q ss_pred             HHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCC-------------CCCcCCCCc
Q psy8109         725 HYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPD-------------ILDLKDTSP  791 (1011)
Q Consensus       725 ~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~-------------~~d~~g~t~  791 (1011)
                      |+|+..|+ .+++++|+++ |++++..+..|.||||+|+..|+.+++++|+++|++..             .....+.++
T Consensus        50 ~~A~~~g~-~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (282)
T 1oy3_D           50 HLAAILGE-ASTVEKLYAA-GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP  127 (282)
T ss_dssp             HHHHHHTC-HHHHHHHHHT-TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------------------
T ss_pred             HHHHHcCC-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcch
Confidence            77777777 7777777777 77777777777778887777777788887777776532             123456677


Q ss_pred             ccccccCCh-HHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccC-CCCCHHHHHHHcCCHH
Q psy8109         792 LLSSCRQGL-YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK-YGKIAFHSACQAKNWD  869 (1011)
Q Consensus       792 L~~A~~~g~-~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~-~g~taL~~A~~~g~~~  869 (1011)
                      ++.++..+. ..+...+...+++++. .+..|.||||+|+..|+.++|++|+++|++++.++. .|+||||+|+..|+.+
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~  206 (282)
T 1oy3_D          128 AAVDSQPNPENEEEPRDEDWRLQLEA-ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS  206 (282)
T ss_dssp             ----------------CCCGGGGTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred             hhhccccccchhhhhhhhhhhhcCCC-cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHH
Confidence            777776654 3445566677888887 788999999999999999999999999999999985 4999999999999999


Q ss_pred             HHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhh
Q psy8109         870 IVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANI  909 (1011)
Q Consensus       870 iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~  909 (1011)
                      +|++|+++|++++.+|..|.||||+|+..|+.++++.+..
T Consensus       207 ~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~  246 (282)
T 1oy3_D          207 VLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA  246 (282)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHH
T ss_pred             HHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHH
Confidence            9999999999999999999999999999999999998643

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.7e-35  Score=314.26  Aligned_cols=224  Identities=25%  Similarity=0.315  Sum_probs=167.8

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHH
Q psy8109         648 KTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYA  727 (1011)
Q Consensus       648 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A  727 (1011)
                      +|..+.+||+.|+..|+.++|++|++.|++......                         ..++..+..  +.|||+.|
T Consensus         7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~-------------------------~~~~~~~~~--~~t~L~~a   59 (269)
T 4b93_B            7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAE-------------------------DTVSAADPE--FCHPLCQC   59 (269)
T ss_dssp             CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------------------
T ss_pred             cCccchhHHHHHHHcCCHHHHHHHHHCCCccccccc-------------------------ccccccCcc--CCCHHHHH
Confidence            455566888888888888888888887765421110                         011112222  78899999


Q ss_pred             HHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHH
Q psy8109         728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTL  807 (1011)
Q Consensus       728 ~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~L  807 (1011)
                      +..++...++++|++. |+++|.+|.+|+||||+|+..|+.++|++|++.|++++..+..|.||++.|+..++.+++++|
T Consensus        60 ~~~~~~~~~v~~Ll~~-Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~L  138 (269)
T 4b93_B           60 PKCAPAQKRLAKVPAS-GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCL  138 (269)
T ss_dssp             ---------------C-CCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred             HHhCCHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHH
Confidence            8887755688888888 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccccc
Q psy8109         808 LEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKY  887 (1011)
Q Consensus       808 l~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~  887 (1011)
                      +++|++++. .+..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|+|++.+|.+
T Consensus       139 l~~g~~~n~-~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~  217 (269)
T 4b93_B          139 LDSNAKPNK-KDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKR  217 (269)
T ss_dssp             HHTTCCSCC-CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred             HHCCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence            999999997 7888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHhhHHhhCC
Q psy8109         888 RMTFESSKVVEKH  900 (1011)
Q Consensus       888 g~t~l~~a~~~~~  900 (1011)
                      |+|||++|+++++
T Consensus       218 G~TpL~~A~~~~~  230 (269)
T 4b93_B          218 QRTAVDCAEQNSK  230 (269)
T ss_dssp             SCCSGGGSCTTCH
T ss_pred             CCCHHHHHHhCCc
Confidence            9999999988775

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.9e-35  Score=311.14  Aligned_cols=157  Identities=22%  Similarity=0.266  Sum_probs=80.5

Q ss_pred             cccCCCccHHHHHHhCCCH-HHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHH
Q psy8109         750 LRNFNNRTALNFAAFGNNL-DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHT  828 (1011)
Q Consensus       750 ~~~~~g~t~L~~Aa~~g~~-~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~  828 (1011)
                      ..+..|.|||+.|+..++. .++++|++.|+++|..|..|+||||+|+..|+.++|++|++.|++++. .+..|.||++.
T Consensus        47 ~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~  125 (269)
T 4b93_B           47 AADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHL  125 (269)
T ss_dssp             ----------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHH
T ss_pred             ccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCcccc
Confidence            3444555666666555443 355566666666666666666666666666666666666666666655 45556666666


Q ss_pred             HHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109         829 AAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA  907 (1011)
Q Consensus       829 Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  907 (1011)
                      |+..++.+++++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.++++.+
T Consensus       126 a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~L  204 (269)
T 4b93_B          126 ACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELL  204 (269)
T ss_dssp             HHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred             ccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHH
Confidence            6666666666666666666666666666666666666666666666666666666666666666666666666666554

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=4.8e-34  Score=301.22  Aligned_cols=229  Identities=25%  Similarity=0.335  Sum_probs=210.0

Q ss_pred             ccCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCC
Q psy8109         646 NHKTKDGSTALFFACYDKRLDLVEILLE----ANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYY  720 (1011)
Q Consensus       646 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~  720 (1011)
                      +.+|..|.||||+|+..|+.+++++|++    .|++++..+. +.||||.|+. .|+.+++++|+++|++++..+..  |
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~~~~~--g   79 (241)
T 1k1a_A            3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVI-TTLPSVVRLLVTAGASPMALDRH--G   79 (241)
T ss_dssp             ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTCCCTT--S
T ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHH-cCCHHHHHHHHHcCCCccccCCC--C
Confidence            5678999999999999999999999997    8999998887 9999999999 99999999999999999988877  9


Q ss_pred             CcHHHHHHHCCCHHHHHHHHHHhcCC----CcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCC-cCCCCccccc
Q psy8109         721 MTPLHYASYRGDCNDIARFLVEECNA----DITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD-LKDTSPLLSS  795 (1011)
Q Consensus       721 ~t~l~~A~~~g~~~~iv~~Ll~~~g~----~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~A  795 (1011)
                      .||||+|+..|+ .+++++|++. +.    +++..+..|.||||.|+..|+.+++++|++.|++++..+ ..|.||||+|
T Consensus        80 ~t~l~~A~~~~~-~~~~~~Ll~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A  157 (241)
T 1k1a_A           80 QTAAHLACEHRS-PTCLRALLDS-AAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHA  157 (241)
T ss_dssp             CCHHHHHHHTTC-HHHHHHHHHH-SCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHH
T ss_pred             CCHHHHHHHcCC-HHHHHHHHHc-CCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHH
Confidence            999999999999 9999999998 55    888899999999999999999999999999999999998 7899999999


Q ss_pred             ccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHH
Q psy8109         796 CRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL  875 (1011)
Q Consensus       796 ~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll  875 (1011)
                      +..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.++++.|+
T Consensus       158 ~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~  236 (241)
T 1k1a_A          158 VENNSLSMVQLLLQHGANVNA-QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA  236 (241)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC--
T ss_pred             HHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhc
Confidence            999999999999999999997 7889999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCC
Q psy8109         876 DAGSN  880 (1011)
Q Consensus       876 ~~ga~  880 (1011)
                      +.+++
T Consensus       237 ~~~aS  241 (241)
T 1k1a_A          237 TRPAS  241 (241)
T ss_dssp             -----
T ss_pred             cCCCC
Confidence            88763

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=5.4e-33  Score=291.07  Aligned_cols=224  Identities=32%  Similarity=0.394  Sum_probs=167.3

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR  336 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~  336 (1011)
                      .+.+||+.|+..|++++|++|++.+.......+..|.||||+|+..|+.++|++|+++|+  +++..+..|.||||+|+.
T Consensus         5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~   82 (231)
T 3aji_A            5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSPLHIAAS   82 (231)
T ss_dssp             CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHH
T ss_pred             cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCC--CCCCcCCCCCCHHHHHHH
Confidence            466888888888888888888887665433444448888888888888888888888887  678888888888888888


Q ss_pred             cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109         337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI  415 (1011)
Q Consensus       337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~  415 (1011)
                      .|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..+.||||+|+..|+.+++++|+++ 
T Consensus        83 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-  161 (231)
T 3aji_A           83 AGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY-  161 (231)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-
T ss_pred             cCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-
Confidence            88888888888888888888888888888888888888888888888887765 5567777777777777766666543 


Q ss_pred             CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHH
Q psy8109         416 NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPI  494 (1011)
Q Consensus       416 ~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L  494 (1011)
                                                      |++++..+..|.||||+|+..|+.+++++|++ +++++..+..|.|||
T Consensus       162 --------------------------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l  209 (231)
T 3aji_A          162 --------------------------------KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPL  209 (231)
T ss_dssp             --------------------------------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred             --------------------------------CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence                                            44555555556666666666666666666666 556666666666666


Q ss_pred             HHHHHcCCHHHHHHHHhcCcc
Q psy8109         495 YFAIKNNHLEIFNLLLKLGAD  515 (1011)
Q Consensus       495 ~~A~~~g~~~iv~~Ll~~ga~  515 (1011)
                      ++|+..++.+++++|+++|++
T Consensus       210 ~~A~~~~~~~i~~lL~~~~a~  230 (231)
T 3aji_A          210 QVAKGGLGLILKRLAEGEEAS  230 (231)
T ss_dssp             HHSCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhhHHHHHHHHHcccccc
Confidence            666666666666666665543

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=6e-34  Score=307.74  Aligned_cols=236  Identities=21%  Similarity=0.264  Sum_probs=189.9

Q ss_pred             HHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCC
Q psy8109         632 EAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADV  711 (1011)
Q Consensus       632 ~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~  711 (1011)
                      ++.++|.+ .  +++..+..|.||||+|+..|+.+++++|+++|++++..+ +.||||.|+. .|+.+++++|+++|+++
T Consensus        14 ~v~~lL~~-~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-g~t~L~~A~~-~g~~~~v~~Ll~~ga~~   88 (285)
T 3kea_A           14 QLKSFLSS-K--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE-NEFPLHQAAT-LEDTKIVKILLFSGLDD   88 (285)
T ss_dssp             HHHHHHHS-T--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT-TCCHHHHHTT-SSSCHHHHHHHHTTCCT
T ss_pred             HHHHHHHh-C--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCHHHHHHH-cCCHHHHHHHHHCCCCC
Confidence            44444443 3  467777777888888888888888888887777777664 5677777776 67777777777777777


Q ss_pred             CccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCC-ccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCC
Q psy8109         712 NLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNN-RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTS  790 (1011)
Q Consensus       712 ~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g-~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t  790 (1011)
                      +..+..  |.||||+|+..|+ .+++++|++. |++++..+..| .||||+|+..|+.+++++|+++|++.... ..|.|
T Consensus        89 ~~~d~~--g~t~L~~A~~~g~-~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t  163 (285)
T 3kea_A           89 SQFDDK--GNTALYYAVDSGN-MQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLS  163 (285)
T ss_dssp             TCCCTT--SCCHHHHHHHTTC-HHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHH
T ss_pred             CCcCCC--CCcHHHHHHHcCC-HHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCcc
Confidence            776665  8899999999998 8999999988 89999888888 79999999999999999999998876332 27889


Q ss_pred             cccccccCChHHHHHHHHHcCCCccccccCCCChH-HHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHH
Q psy8109         791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTA-LHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWD  869 (1011)
Q Consensus       791 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~-L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~  869 (1011)
                      |||+|+..|+.++|++|+++|++++. .+..|+|| ||+|+..|+.+++++|+++|++++.+|.       .|+..|+.+
T Consensus       164 ~L~~A~~~g~~~~v~~Ll~~gad~n~-~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~  235 (285)
T 3kea_A          164 CIHITIKNGHVDMMILLLDYMTSTNT-NNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAE  235 (285)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHTCT-TCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHH
T ss_pred             HHHHHHHcChHHHHHHHHHcCCCCCc-ccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHH
Confidence            99999999999999999999998887 77788887 9999999999999999999999888773       567788999


Q ss_pred             HHHHHHhcCCCccccc
Q psy8109         870 IVTFLLDAGSNIEKAT  885 (1011)
Q Consensus       870 iv~~Ll~~ga~~~~~~  885 (1011)
                      +|++|+++|++++..+
T Consensus       236 iv~~Ll~~g~~~~~~~  251 (285)
T 3kea_A          236 IAKMIIEKHVEYKSDS  251 (285)
T ss_dssp             HHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHcCCCCCCcc
Confidence            9999999988876543

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.8e-33  Score=303.97  Aligned_cols=218  Identities=22%  Similarity=0.222  Sum_probs=159.7

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR  336 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~  336 (1011)
                      .|.||||.|+..|+.++|++|+++|++++..+   |.||||+|+..|+.++|++|+++|+  +++..+..|.||||+|+.
T Consensus        30 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~d~~g~t~L~~A~~  104 (285)
T 3kea_A           30 HGHSASYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLEDTKIVKILLFSGL--DDSQFDDKGNTALYYAVD  104 (285)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT---TCCHHHHHTTSSSCHHHHHHHHTTC--CTTCCCTTSCCHHHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCcHHHHHHH
Confidence            77888888888888888888888888776652   7888888888888888888888887  677778888888888888


Q ss_pred             cCcHHHHHHHHHCCCCCccCCCCC-CcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109         337 RKCLEIVKILLDKGADINSGNDDG-CTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI  415 (1011)
Q Consensus       337 ~g~~~iv~~Ll~~ga~~n~~~~~g-~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~  415 (1011)
                      .|+.++|++|+++|++++..+..| .||||+|+..|+.+++++|+++|++......+.||||+|+..|+.+++++|+++ 
T Consensus       105 ~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-  183 (285)
T 3kea_A          105 SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDY-  183 (285)
T ss_dssp             TTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHH-
T ss_pred             cCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHc-
Confidence            888888888888888888888777 688888888888888888888887664334567777777777777777776654 


Q ss_pred             CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChH-HHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcH
Q psy8109         416 NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTA-LHLACYFGNLAMVNYLVK-HIDINSENDLGKTP  493 (1011)
Q Consensus       416 ~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~-L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~  493 (1011)
                                                      |++++..+..|.|| ||+|+..|+.+++++|++ +++++..+.     
T Consensus       184 --------------------------------gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-----  226 (285)
T 3kea_A          184 --------------------------------MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-----  226 (285)
T ss_dssp             --------------------------------HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-----
T ss_pred             --------------------------------CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-----
Confidence                                            33444455555565 666666666666666666 555555542     


Q ss_pred             HHHHHHcCCHHHHHHHHhcCcccccc
Q psy8109         494 IYFAIKNNHLEIFNLLLKLGADVAVK  519 (1011)
Q Consensus       494 L~~A~~~g~~~iv~~Ll~~ga~~~~~  519 (1011)
                        .|+..|+.+++++|+++|+++...
T Consensus       227 --~a~~~~~~~iv~~Ll~~g~~~~~~  250 (285)
T 3kea_A          227 --ENVLLDDAEIAKMIIEKHVEYKSD  250 (285)
T ss_dssp             --GGGTTTCHHHHHHHHHHHHHHTTC
T ss_pred             --hhhhcCCHHHHHHHHHcCCCCCCc
Confidence              345567777777777777665443

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=9.3e-33  Score=291.03  Aligned_cols=234  Identities=26%  Similarity=0.354  Sum_probs=198.4

Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHH
Q psy8109         612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTA  691 (1011)
Q Consensus       612 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~a  691 (1011)
                      +..|..|.++|+.|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.|++++....        
T Consensus         3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~--------   73 (240)
T 3eu9_A            3 THIDDYSTWDIVKATQYGIYERCRELVE-AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG--------   73 (240)
T ss_dssp             CCCSCGGGCCHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT--------
T ss_pred             cccccccchHHHHHHHcCChHHHHHHHH-cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcC--------
Confidence            4456667778888888888888888887 7777777777788888888887777777777777766543221        


Q ss_pred             HHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHH
Q psy8109         692 LMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLL  771 (1011)
Q Consensus       692 a~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv  771 (1011)
                                              .  .|.||||+|+..|+ .+++++|++. |++++..+..|.||||.|+..|+.+++
T Consensus        74 ------------------------~--~~~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~  125 (240)
T 3eu9_A           74 ------------------------D--LNSTPLHWATRQGH-LSMVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIV  125 (240)
T ss_dssp             ------------------------T--TTBCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             ------------------------C--cCCChhHHHHHcCC-HHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHH
Confidence                                    1  27789999999998 8999999988 999999999999999999999999999


Q ss_pred             HHHHHCCCCCCCCCcCCCCcccccccCCh-HHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCccc
Q psy8109         772 KFLLKAGADPDILDLKDTSPLLSSCRQGL-YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINA  850 (1011)
Q Consensus       772 ~~Ll~~gad~~~~d~~g~t~L~~A~~~g~-~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~  850 (1011)
                      ++|+++|++++..+..|.||||+|+..++ .+++++|++.|++++......|.||||+|+..|+.+++++|+++|++++.
T Consensus       126 ~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~  205 (240)
T 3eu9_A          126 AYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDA  205 (240)
T ss_dssp             HHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred             HHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999996665 89999999999999984444899999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy8109         851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE  882 (1011)
Q Consensus       851 ~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~  882 (1011)
                      +|..|+|||++|++.|+.+++++|+++|++..
T Consensus       206 ~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~  237 (240)
T 3eu9_A          206 QNIKGESALDLAKQRKNVWMINHLQEARQAKG  237 (240)
T ss_dssp             BCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred             cCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence            99999999999999999999999999988764

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=5.3e-32  Score=285.27  Aligned_cols=224  Identities=29%  Similarity=0.369  Sum_probs=196.8

Q ss_pred             CCCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q psy8109         210 SHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEK  289 (1011)
Q Consensus       210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~  289 (1011)
                      .+..|.|+|++|+..|+.+++++|++.|++++..+.           .|.||||.|+..|+.++|++|+++|++++....
T Consensus         5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~   73 (240)
T 3eu9_A            5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDK-----------ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG   73 (240)
T ss_dssp             CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT
T ss_pred             cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCC-----------CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcC
Confidence            367788999999999999999999999999887776           899999999999999999999999999887777


Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q psy8109         290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA  369 (1011)
Q Consensus       290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~  369 (1011)
                      ..|.|||++|+..|+.+++++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+.
T Consensus        74 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~  151 (240)
T 3eu9_A           74 DLNSTPLHWATRQGHLSMVVQLMKYGA--DPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAY  151 (240)
T ss_dssp             TTTBCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CcCCChhHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH
Confidence            779999999999999999999999998  788899999999999999999999999999999999999999999999997


Q ss_pred             cCC-hhHHHHHHhcCCCCCCCC--CCCcHHHHHHhcCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHHHHHH
Q psy8109         370 QNC-LEVFNYLVNHGCDLSVPE--GERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIE  446 (1011)
Q Consensus       370 ~g~-~~iv~~Ll~~g~~~~~~~--~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~  446 (1011)
                      .|+ .+++++|++.|++++...  .+.||||+|+..|+.+++++|+++                                
T Consensus       152 ~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------------  199 (240)
T 3eu9_A          152 RTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA--------------------------------  199 (240)
T ss_dssp             HCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH--------------------------------
T ss_pred             hCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc--------------------------------
Confidence            776 899999999999988762  677888888888887777777654                                


Q ss_pred             cCCCcccccCCCChHHHHHHHcCCHHHHHHHHh
Q psy8109         447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVK  479 (1011)
Q Consensus       447 ~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  479 (1011)
                       |++++..+..|.|||++|+..|+.+++++|++
T Consensus       200 -g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~  231 (240)
T 3eu9_A          200 -GANVDAQNIKGESALDLAKQRKNVWMINHLQE  231 (240)
T ss_dssp             -TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred             -CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence             55666666667777777777777777777776

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=9.8e-33  Score=288.45  Aligned_cols=215  Identities=20%  Similarity=0.254  Sum_probs=183.5

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCC
Q psy8109         652 GSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRG  731 (1011)
Q Consensus       652 g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g  731 (1011)
                      |.||||+|+..|+.+++++|++.|.++..                                ..+..  |.||||+|+..|
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--------------------------------~~~~~--g~t~L~~A~~~~   47 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLL--------------------------------QKDQD--GRIPLHWSVSFQ   47 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTT--------------------------------CCCTT--SCCHHHHHHHTT
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccc--------------------------------cCCCC--CCCHHHHHHHcC
Confidence            45677777777776666666665544321                                12223  888899998888


Q ss_pred             CHHHHHHHHHHhcC--CCccc-ccCCCccHHHHHHhCCCHHHHHHHHHCC--CCCCCCCcCCCCcccccccCChHHHHHH
Q psy8109         732 DCNDIARFLVEECN--ADITL-RNFNNRTALNFAAFGNNLDLLKFLLKAG--ADPDILDLKDTSPLLSSCRQGLYEIVDT  806 (1011)
Q Consensus       732 ~~~~iv~~Ll~~~g--~~~~~-~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g--ad~~~~d~~g~t~L~~A~~~g~~~iv~~  806 (1011)
                      + .+++++|++. |  .+++. .+..|.||||+|+..|+.+++++|++.|  ++++..+..|.||||+|+..|+.+++++
T Consensus        48 ~-~~~v~~Ll~~-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~  125 (228)
T 2dzn_A           48 A-HEITSFLLSK-MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF  125 (228)
T ss_dssp             C-HHHHHHHHHT-CTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             C-HHHHHHHHhc-cccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHH
Confidence            8 8899999888 6  55555 7788999999999999999999999998  8888999999999999999999999999


Q ss_pred             HHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhcc-CCcccccCCCCCHHHHHHHcCCHHHHHHHH-hcCCCcccc
Q psy8109         807 LLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN-ADINAEDKYGKIAFHSACQAKNWDIVTFLL-DAGSNIEKA  884 (1011)
Q Consensus       807 Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-a~in~~d~~g~taL~~A~~~g~~~iv~~Ll-~~ga~~~~~  884 (1011)
                      |+++|++++. .+..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++..
T Consensus       126 Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~  204 (228)
T 2dzn_A          126 LIENGASVRI-KDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV  204 (228)
T ss_dssp             HHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCB
T ss_pred             HHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCcc
Confidence            9999999997 7789999999999999999999999999 999999999999999999999999999999 899999999


Q ss_pred             cccCCCHHhhHHhhCCHHH
Q psy8109         885 TKYRMTFESSKVVEKHVAK  903 (1011)
Q Consensus       885 ~~~g~t~l~~a~~~~~~~~  903 (1011)
                      |..|.||+++|...+..+.
T Consensus       205 ~~~g~t~l~~A~~~~~~~~  223 (228)
T 2dzn_A          205 DNKGAKAEDVALNEQVKKF  223 (228)
T ss_dssp             CTTSCBGGGGCSSTTHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHH
Confidence            9999999999977654443

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=1.1e-32  Score=286.85  Aligned_cols=216  Identities=23%  Similarity=0.247  Sum_probs=174.5

Q ss_pred             CCHHHHHHHHhhCCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhC
Q psy8109         629 GCLEAVKFLLNTKNIDVNHK-TKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKY  707 (1011)
Q Consensus       629 g~~~iv~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~  707 (1011)
                      |+.+++++|++ .|++++.. +..|.||||+|+..|+.+++++|+++|++++                            
T Consensus         2 g~~~~i~~Ll~-~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------------------------   52 (223)
T 2f8y_A            2 DAPAVISDFIY-QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN----------------------------   52 (223)
T ss_dssp             ---CCEETTEE-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------------------
T ss_pred             CcHHHHHHHHH-cCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCC----------------------------
Confidence            45555666666 55555543 5566666666666666666666666555544                            


Q ss_pred             CCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcC
Q psy8109         708 GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK  787 (1011)
Q Consensus       708 g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~  787 (1011)
                           ..+..  |.||||+|+..|+ .+++++|++....+++..+..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus        53 -----~~~~~--g~t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~  124 (223)
T 2f8y_A           53 -----IQDNM--GRTPLHAAVSADA-QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL  124 (223)
T ss_dssp             -----CCCTT--SCCHHHHHHHTTC-HHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred             -----CcCCC--CCCHHHHHHHcCC-HHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCC
Confidence                 33333  7888888888888 888888888855588888888999999999999999999999999999999999


Q ss_pred             CCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCC
Q psy8109         788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN  867 (1011)
Q Consensus       788 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~  867 (1011)
                      |.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+
T Consensus       125 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~  203 (223)
T 2f8y_A          125 GKSALHWAAAVNNVDAAVVLLKNGANKDM-QNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH  203 (223)
T ss_dssp             SCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence            99999999999999999999999999887 77889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcc
Q psy8109         868 WDIVTFLLDAGSNIE  882 (1011)
Q Consensus       868 ~~iv~~Ll~~ga~~~  882 (1011)
                      .+++++|+++|+...
T Consensus       204 ~~i~~~L~~~g~~~~  218 (223)
T 2f8y_A          204 HDIVRLLDEYNLVRS  218 (223)
T ss_dssp             HHHHHHHHHTTCSSC
T ss_pred             hHHHHHHHHcCCCcc
Confidence            999999999998654

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=6.4e-32  Score=282.23  Aligned_cols=208  Identities=23%  Similarity=0.269  Sum_probs=179.0

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHCCCCCCc-ccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcC--CCCcccccC
Q psy8109         214 GYKALCWALQEKKTDIAKLLVDKGVPLNL-VDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKG--ANPLAIEKS  290 (1011)
Q Consensus       214 g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~-~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g--~~~~~~~~~  290 (1011)
                      |.||||+||..|+.++|++|++.|.++.. .+.           .|.||||.|+..|+.++|++|++.|  .+++...+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~   70 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQ-----------DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDD   70 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCT
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCC-----------CCCCHHHHHHHcCCHHHHHHHHhccccccccccCCC
Confidence            67999999999999999999998876543 333           7899999999999999999999999  444442344


Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy8109         291 RNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ  370 (1011)
Q Consensus       291 ~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~  370 (1011)
                      .|.||||+|+..|+.+++++|+++|...+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus        71 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~  150 (228)
T 2dzn_A           71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASV  150 (228)
T ss_dssp             TSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence            59999999999999999999999984448888999999999999999999999999999999999999999999999999


Q ss_pred             CChhHHHHHHhcC-CCCCCC-CCCCcHHHHHHhcCCHHHHHHHH-hcc-CccCCCCCCCcHhHHHH
Q psy8109         371 NCLEVFNYLVNHG-CDLSVP-EGERTALHMASQFGNLEMVNYLL-KHI-NINHQDKDGWTPLTCSI  432 (1011)
Q Consensus       371 g~~~iv~~Ll~~g-~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll-~~~-~~~~~~~~~~t~l~~a~  432 (1011)
                      |+.+++++|+++| ++++.. ..|.||||+|+..|+.+++++|+ +.| +++..+..|.||+++|.
T Consensus       151 ~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~  216 (228)
T 2dzn_A          151 GSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL  216 (228)
T ss_dssp             TCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCS
T ss_pred             CCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHH
Confidence            9999999999999 888876 77889999999999999999998 555 56666666666666553

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=1.7e-32  Score=299.67  Aligned_cols=261  Identities=25%  Similarity=0.305  Sum_probs=173.8

Q ss_pred             HHHHcCCHHHHHHHHhhCCCCccc---------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHH
Q psy8109         624 VAVSHGCLEAVKFLLNTKNIDVNH---------KTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALM  693 (1011)
Q Consensus       624 ~A~~~g~~~iv~~Ll~~~g~~~~~---------~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~  693 (1011)
                      .++..+..+.++.++. ....+..         .+..+.|||+.|+..|+.+++++|+++|++++..+. +.||||.|+.
T Consensus         4 ~~a~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   82 (299)
T 1s70_B            4 ADAKQKRNEQLKRWIG-SETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACI   82 (299)
T ss_dssp             HHHHHHHHHHHHHHHH-TTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHc-cccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence            3455556666666655 2322221         112345677777777777777777777777665554 5555555555


Q ss_pred             cCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHH
Q psy8109         694 KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKF  773 (1011)
Q Consensus       694 ~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~  773 (1011)
                       .|+.+++++|+++|++++..+..  |.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++
T Consensus        83 -~g~~~~v~~Ll~~ga~~~~~~~~--g~tpL~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~  157 (299)
T 1s70_B           83 -DDNVDMVKFLVENGANINQPDNE--GWIPLHAAASCGY-LDIAEYLISQ-GAHVGAVNSEGDTPLDIAEEEAMEELLQN  157 (299)
T ss_dssp             -TTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHCCSHHHHHHHHH
T ss_pred             -cCCHHHHHHHHHCCCCCCCCCCC--CCcHHHHHHHcCC-HHHHHHHHhC-CCCCCCcCCCCCCHHHHHHhcchHHHHHH
Confidence             55555555555555555555544  5555555555555 5555555555 55555555555555555555555555555


Q ss_pred             HHHC-CCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCccccc
Q psy8109         774 LLKA-GADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED  852 (1011)
Q Consensus       774 Ll~~-gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d  852 (1011)
                      |+.. |++++..+..+.++        ....+..++..+.......+..|.||||+|+..|+.++|++|+++|+++|.+|
T Consensus       158 ll~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d  229 (299)
T 1s70_B          158 EVNRQGVDIEAARKEEERI--------MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD  229 (299)
T ss_dssp             HHHHHTCCHHHHHHHHHHH--------HHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC
T ss_pred             HHhhcCCCchhhhhhhhhH--------HHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcC
Confidence            5432 33333222111111        11233344444544444466789999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhh
Q psy8109         853 KYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVE  898 (1011)
Q Consensus       853 ~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~  898 (1011)
                      ..|+||||+|+..|+.++|++|+++|++++..|..|.||+++|...
T Consensus       230 ~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~  275 (299)
T 1s70_B          230 YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED  275 (299)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred             CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999754

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=1.6e-32  Score=285.77  Aligned_cols=209  Identities=23%  Similarity=0.276  Sum_probs=195.9

Q ss_pred             CCHHHHHHHHhCCCCCCcc-CCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHH
Q psy8109         696 PSLDIIKMLVKYGADVNLT-NEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFL  774 (1011)
Q Consensus       696 ~~~~iv~~Ll~~g~~~~~~-~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~L  774 (1011)
                      |+.+++++|+++|++++.. +..  |.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|
T Consensus         2 g~~~~i~~Ll~~g~~~~~~~d~~--g~t~L~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L   77 (223)
T 2f8y_A            2 DAPAVISDFIYQGASLHNQTDRT--GETALHLAARYSR-SDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQIL   77 (223)
T ss_dssp             ---CCEETTEETTCCTTCCCTTT--CCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CcHHHHHHHHHcCCCcccccCCC--CCchHHHHHHcCC-HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence            5677788888888888765 444  9999999999999 9999999999 999999999999999999999999999999


Q ss_pred             HHCCC-CCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccC
Q psy8109         775 LKAGA-DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK  853 (1011)
Q Consensus       775 l~~ga-d~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~  853 (1011)
                      ++.++ +++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus        78 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~  156 (223)
T 2f8y_A           78 IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN  156 (223)
T ss_dssp             HHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence            99987 8999999999999999999999999999999999997 778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhh
Q psy8109         854 YGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANI  909 (1011)
Q Consensus       854 ~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~  909 (1011)
                      .|.||||+|+..|+.+++++|+++|++++..|..|.||+++|+..++.++++.+..
T Consensus       157 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~  212 (223)
T 2f8y_A          157 REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE  212 (223)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988644

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=2.4e-34  Score=317.31  Aligned_cols=249  Identities=15%  Similarity=0.095  Sum_probs=186.8

Q ss_pred             HHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCC---------------C---CCcHHHHHH
Q psy8109         631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGD---------------G---TYTPLYTAL  692 (1011)
Q Consensus       631 ~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~---------------~---~~t~L~~aa  692 (1011)
                      .+++++|++ .|++++..+..|.|+++     |+.+++++|+++|++++...               .   ..+.++.++
T Consensus        32 ~dlv~~ll~-~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~  105 (327)
T 1sw6_A           32 HDLTSDFLS-SPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSF  105 (327)
T ss_dssp             TTCCCSTTT-SSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CH
T ss_pred             CchHHHHhh-CCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHH
Confidence            344555555 55555555555555544     55555555555555543210               0   111223333


Q ss_pred             HcCCCHHHHHHHHhCCCCCCc-cCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC---H
Q psy8109         693 MKDPSLDIIKMLVKYGADVNL-TNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN---L  768 (1011)
Q Consensus       693 ~~~~~~~iv~~Ll~~g~~~~~-~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~---~  768 (1011)
                      . .+..+++++|++.|++++. .+..  |.||||+|+..|+ .+++++|+++ |++++.++..|+||||+|+..|+   .
T Consensus       106 ~-~~~~~~~~~l~~~g~dvn~~~d~~--g~TpLh~Aa~~g~-~~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~  180 (327)
T 1sw6_A          106 D-SLLQEVNDAFPNTQLNLNIPVDEH--GNTPLHWLTSIAN-LELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDS  180 (327)
T ss_dssp             H-HHHHHHHHHCTTSCCCSCSCCSTT--CCCHHHHHHHTTC-HHHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred             H-hhHHHHHHHHHhcCCCcccccCCC--CCcHHHHHHHcCC-HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhcccccH
Confidence            3 5567888899999999998 6776  9999999999999 9999999998 99999999999999999999988   6


Q ss_pred             HHHHHHHHCC-CCCCCCCcCCCCccccccc----CChHHHHHHHHHc--------------------CCCccccccCCCC
Q psy8109         769 DLLKFLLKAG-ADPDILDLKDTSPLLSSCR----QGLYEIVDTLLEY--------------------NADTNLRTIKHGS  823 (1011)
Q Consensus       769 ~iv~~Ll~~g-ad~~~~d~~g~t~L~~A~~----~g~~~iv~~Ll~~--------------------g~~~~~~~~~~g~  823 (1011)
                      ++++.|++.+ ++++..+..|+||||+|+.    .|+.+++++|++.                    |++++. .+..|+
T Consensus       181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~-~~~~g~  259 (327)
T 1sw6_A          181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND-KNGERK  259 (327)
T ss_dssp             TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------
T ss_pred             HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc-ccccCC
Confidence            8888888876 7789999999999999998    8999999999987                    888887 788999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhC
Q psy8109         824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEK  899 (1011)
Q Consensus       824 t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  899 (1011)
                      ||||.|+.      +++|+++  ++|.+|..|+||||+|+..|+.++|++|+++||+++.+|..|+||||+|++.|
T Consensus       260 t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          260 DSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred             ChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence            99999985      8999988  68889999999999999999999999999999999999999999999998764

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.98  E-value=2e-32  Score=299.18  Aligned_cols=269  Identities=23%  Similarity=0.294  Sum_probs=206.3

Q ss_pred             HHHHcCCHHHHHHHHHcCCCCcccc--------cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHH
Q psy8109         264 SAILNSDIELVKLLLEKGANPLAIE--------KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIAC  335 (1011)
Q Consensus       264 ~A~~~g~~~iv~~Ll~~g~~~~~~~--------~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa  335 (1011)
                      .++..|+.+.++.++..........        ...|.|||+.||..|+.++|++|+++|+  +++..+..|.||||+||
T Consensus         4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~   81 (299)
T 1s70_B            4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA--DINYANVDGLTALHQAC   81 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCC--CTTCBCTTCCBHHHHHH
T ss_pred             hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHH
Confidence            4677788888888887765533221        1236689999999999999999999998  78999999999999999


Q ss_pred             hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhc
Q psy8109         336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH  414 (1011)
Q Consensus       336 ~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~  414 (1011)
                      ..|+.++|++|+++|++++..+..|.||||+|+..|+.++|++|+++|++++.. ..+.|||++|+..|+.+++++++..
T Consensus        82 ~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~  161 (299)
T 1s70_B           82 IDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR  161 (299)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHH
T ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999877 6789999999999999999999876


Q ss_pred             cCcc--CCCCCCCcHhHHHHhcCCCHHHHHHHHHcC-CCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCC
Q psy8109         415 ININ--HQDKDGWTPLTCSIKGQASLEVFHSIIEAG-ADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLG  490 (1011)
Q Consensus       415 ~~~~--~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g  490 (1011)
                      ...+  ..+..+.++         ....+..++..+ ......+..|.||||+|+..|+.+++++|++ +++++..+..|
T Consensus       162 ~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g  232 (299)
T 1s70_B          162 QGVDIEAARKEEERI---------MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG  232 (299)
T ss_dssp             HTCCHHHHHHHHHHH---------HHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred             cCCCchhhhhhhhhH---------HHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCC
Confidence            4211  111111111         122233334433 3334455667788888888888888888887 67777777778


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHh
Q psy8109         491 KTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLS  544 (1011)
Q Consensus       491 ~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  544 (1011)
                      .||||+|+..|+.+++++|+++|++++..+..|.||+++|+.. ..+++..++.
T Consensus       233 ~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~  285 (299)
T 1s70_B          233 WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEELQK  285 (299)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHH
T ss_pred             CcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHH
Confidence            8888888888888888888888888877777777887777553 3444444444

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.97  E-value=3.1e-33  Score=308.46  Aligned_cols=273  Identities=17%  Similarity=0.149  Sum_probs=206.3

Q ss_pred             cCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc-------------cC
Q psy8109         224 EKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIE-------------KS  290 (1011)
Q Consensus       224 ~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-------------~~  290 (1011)
                      ....++|++|+++|++++..+.           .|.++++     |+.++|++|+++|++++...             ..
T Consensus        29 ~~~~dlv~~ll~~ga~i~~~~~-----------~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~   92 (327)
T 1sw6_A           29 TFTHDLTSDFLSSPLKIMKALP-----------SPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSE   92 (327)
T ss_dssp             ECCTTCCCSTTTSSCCCEECBC-----------CCCCCCH-----HHHHHHHHHHHHHHC--------------------
T ss_pred             hhcCchHHHHhhCCcccccCCC-----------CCCcccC-----chhHHHHHHHHhccCCccccchHhhhccccccccc
Confidence            4566889999999999998887           7888877     99999999999998765410             00


Q ss_pred             CC---CcHHHHHHHhCCHHHHHHHHHcCCCCCCcc-cCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHH
Q psy8109         291 RN---RTALHVAAIVESVDIVKLLFDYGAEKSVNV-QNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFC  366 (1011)
Q Consensus       291 ~g---~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~-~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~  366 (1011)
                      .+   .+.+|.|+..+..+++++|+++|+  ++|. .+..|+||||+||..|+.++|++|+++|++++..+..|.||||+
T Consensus        93 ~~~~~~~~~~~a~~~~~~~~~~~l~~~g~--dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~  170 (327)
T 1sw6_A           93 GGSSNQQQQHVSFDSLLQEVNDAFPNTQL--NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVK  170 (327)
T ss_dssp             -----------CHHHHHHHHHHHCTTSCC--CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHH
T ss_pred             ccCCccchhHHHHHhhHHHHHHHHHhcCC--CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence            11   223577888888899999999999  7888 89999999999999999999999999999999999999999999


Q ss_pred             HHHcCC---hhHHHHHHhcC-CCCCCC-CCCCcHHHHHHh----cCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCC
Q psy8109         367 AIAQNC---LEVFNYLVNHG-CDLSVP-EGERTALHMASQ----FGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQAS  437 (1011)
Q Consensus       367 A~~~g~---~~iv~~Ll~~g-~~~~~~-~~~~t~L~~Aa~----~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~  437 (1011)
                      |+..|+   .++++.|++.+ ++++.. ..|.||||+|+.    .|+.+++++|++.+..           ......  .
T Consensus       171 A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~-----------~~~~~~--~  237 (327)
T 1sw6_A          171 AVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG-----------WIVKKQ--N  237 (327)
T ss_dssp             HHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHH-----------HHHHGG--G
T ss_pred             HHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHH-----------HHhccc--c
Confidence            999998   78888888886 666665 678999999999    8999999999986310           000000  0


Q ss_pred             HHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccc
Q psy8109         438 LEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVA  517 (1011)
Q Consensus       438 ~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~  517 (1011)
                      ..+...+...|++++..+..|.||||.|+.      +++|++. +++..+..|+||||+|+..|+.+++++|+++|++++
T Consensus       238 ~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~-~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~  310 (327)
T 1sw6_A          238 RPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN-MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF  310 (327)
T ss_dssp             CCEEEC----------------CHHHHHCS------HHHHHHH-TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred             hHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence            001112244588999999999999999985      8888886 789999999999999999999999999999999999


Q ss_pred             cccCCCCCHHHHHHHhC
Q psy8109         518 VKMKSNFTCLHVACEFA  534 (1011)
Q Consensus       518 ~~~~~~~t~L~~A~~~g  534 (1011)
                      ..+..|.||||+|+..|
T Consensus       311 ~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          311 IANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             CCCTTSCCGGGGTCC--
T ss_pred             ccCCCCCCHHHHHHhcC
Confidence            99999999999998754

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=4.8e-31  Score=258.99  Aligned_cols=159  Identities=30%  Similarity=0.434  Sum_probs=149.0

Q ss_pred             cHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChH
Q psy8109         722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLY  801 (1011)
Q Consensus       722 t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~  801 (1011)
                      ++|+.||..|+ .++|++|++. |+++|.+|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus         6 ~~L~~Aa~~G~-~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~   83 (169)
T 4gpm_A            6 KRLIEAAENGN-KDRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK   83 (169)
T ss_dssp             HHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             HHHHHHHHcCC-HHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCH
Confidence            57999999999 9999999998 999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109         802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI  881 (1011)
Q Consensus       802 ~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~  881 (1011)
                      ++|++|+++|+++|. .+..|+||||+|+..|+.++|++|+++|++++.+|..|+|||++|+..|+.++|++|+++||++
T Consensus        84 ~~v~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i  162 (169)
T 4gpm_A           84 EVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL  162 (169)
T ss_dssp             HHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred             HHHHHHHHCcCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence            999999999999998 7889999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cc
Q psy8109         882 EK  883 (1011)
Q Consensus       882 ~~  883 (1011)
                      +.
T Consensus       163 e~  164 (169)
T 4gpm_A          163 EH  164 (169)
T ss_dssp             --
T ss_pred             CC
Confidence            74

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=2.7e-30  Score=253.72  Aligned_cols=159  Identities=40%  Similarity=0.510  Sum_probs=147.6

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcH
Q psy8109         216 KALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTA  295 (1011)
Q Consensus       216 t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~  295 (1011)
                      ++|+.||+.|+.++|++|++.|+++|..+.           .|.|||+.|+..|+.+++++|++.|++++..+.. |+||
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~-----------~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~-g~Tp   73 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDS-----------DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD-GRTP   73 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-----------CCCCHHHHHHHcCCHHHHHHHHhcccchhhhccC-CCCH
Confidence            579999999999999999999999998887           8999999999999999999999999999888776 9999


Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhH
Q psy8109         296 LHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV  375 (1011)
Q Consensus       296 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~i  375 (1011)
                      ||+|+..|+.++|++|+++|+  ++|.+|..|+||||+||..|+.++|++|+++|++++..|..|+|||++|+..|+.++
T Consensus        74 Lh~A~~~g~~~~v~~Ll~~ga--dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i  151 (169)
T 4gpm_A           74 LHHAAENGHKEVVKLLISKGA--DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEV  151 (169)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             HHHHHHcCCHHHHHHHHHCcC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence            999999999999999999999  799999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCC
Q psy8109         376 FNYLVNHGCDLSV  388 (1011)
Q Consensus       376 v~~Ll~~g~~~~~  388 (1011)
                      +++|+++|++++.
T Consensus       152 v~~Ll~~GA~ie~  164 (169)
T 4gpm_A          152 VKLLEKQGGWLEH  164 (169)
T ss_dssp             HHHHHTC------
T ss_pred             HHHHHHCCCCcCC
Confidence            9999999999864

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=3.8e-30  Score=269.56  Aligned_cols=190  Identities=28%  Similarity=0.337  Sum_probs=173.0

Q ss_pred             CcchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcc----c
Q psy8109         213 QGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLA----I  287 (1011)
Q Consensus       213 ~g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~----~  287 (1011)
                      .|.||||+||..|+.++|++|++. |++++..+.           .|.||||.|+..|+.++|++|++.|+++..    .
T Consensus         2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~-----------~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~   70 (232)
T 2rfa_A            2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGA-----------MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTS   70 (232)
T ss_dssp             CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCS
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccc
Confidence            478999999999999999999998 999988877           899999999999999999999999987632    1


Q ss_pred             ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCC-------------CCCCHHHHHHhcCcHHHHHHHHHCCCCCc
Q psy8109         288 EKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNV-------------AGLTPLHIACRRKCLEIVKILLDKGADIN  354 (1011)
Q Consensus       288 ~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~-------------~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n  354 (1011)
                      .+..|.||||+|+..|+.++|++|+++|+  +++..+.             .|.||||+|+..|+.++|++|+++|++++
T Consensus        71 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  148 (232)
T 2rfa_A           71 ELYEGQTALHIAVINQNVNLVRALLARGA--SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR  148 (232)
T ss_dssp             TTTTTCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred             cCCCCcCHHHHHHHcCCHHHHHHHHhCCC--CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence            22349999999999999999999999999  5666554             79999999999999999999999999999


Q ss_pred             cCCCCCCcHHHHHHHcCChhHH----HHHHhcCCCCC------CC-CCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109         355 SGNDDGCTPLFCAIAQNCLEVF----NYLVNHGCDLS------VP-EGERTALHMASQFGNLEMVNYLLKHI  415 (1011)
Q Consensus       355 ~~~~~g~t~L~~A~~~g~~~iv----~~Ll~~g~~~~------~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~  415 (1011)
                      ..|..|.||||+|+..|+.+++    ++|+++|++..      .. ..|.|||++|+..|+.+++++|++++
T Consensus       149 ~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g  220 (232)
T 2rfa_A          149 AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR  220 (232)
T ss_dssp             CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            9999999999999999999988    99999999873      33 67899999999999999999999986

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=5.8e-32  Score=284.10  Aligned_cols=217  Identities=24%  Similarity=0.223  Sum_probs=183.0

Q ss_pred             cCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHH
Q psy8109         647 HKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHY  726 (1011)
Q Consensus       647 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~  726 (1011)
                      ..+..|.||||+|+..|+.+++++|++.+..                             .+++++..+..  |.||||+
T Consensus         3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----------------------------~~~~~~~~~~~--g~t~L~~   51 (236)
T 1ikn_D            3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKG-----------------------------DLAFLNFQNNL--QQTPLHL   51 (236)
T ss_dssp             ----CCCCTTHHHHHTTCSSSSSCCCC----------------------------------CCCCCCCCTT--CCCHHHH
T ss_pred             cCCCCCCchhHHHHHcCChhHHHHHHHHhhc-----------------------------cHHHhhccCCC--CCCHHHH
Confidence            4567788888888888888877777665432                             12344545544  8899999


Q ss_pred             HHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCC------CCCCCcCCCCcccccccCCh
Q psy8109         727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD------PDILDLKDTSPLLSSCRQGL  800 (1011)
Q Consensus       727 A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad------~~~~d~~g~t~L~~A~~~g~  800 (1011)
                      |+..|+ .+++++|++. |++++.++..|.||||+|+..|+.+++++|++.|++      ++..+..|.||||+|+..|+
T Consensus        52 A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~  129 (236)
T 1ikn_D           52 AVITNQ-PEIAEALLGA-GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY  129 (236)
T ss_dssp             HHHTTC-HHHHHCCCSC-CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC
T ss_pred             HHHcCC-HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC
Confidence            999999 9999999988 999999999999999999999999999999999876      46678889999999999999


Q ss_pred             HHHHHHHHHcCCCccccccC-CCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109         801 YEIVDTLLEYNADTNLRTIK-HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS  879 (1011)
Q Consensus       801 ~~iv~~Ll~~g~~~~~~~~~-~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga  879 (1011)
                      .++|++|+++|++++. .+. .|.||||+|+..|+.++|++|+++|++++.+|..|+|||++|+..|+.+++++|+++|+
T Consensus       130 ~~~v~~Ll~~g~~~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga  208 (236)
T 1ikn_D          130 LGIVELLVSLGADVNA-QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL  208 (236)
T ss_dssp             HHHHHHHHHHTCCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred             HHHHHHHHHcCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence            9999999999999998 454 89999999999999999999999999999999999999999999999999999999999


Q ss_pred             Ccc--cccccCCCHHhhHHh
Q psy8109         880 NIE--KATKYRMTFESSKVV  897 (1011)
Q Consensus       880 ~~~--~~~~~g~t~l~~a~~  897 (1011)
                      +..  ..+..|.|+.+.+..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~  228 (236)
T 1ikn_D          209 ENLQMLPESEDEESYDTESE  228 (236)
T ss_dssp             GGGSSCCCCCTTTCCCCC--
T ss_pred             hhhhcCCccchHHHHhhhcc
Confidence            876  778888998876554

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=2.1e-30  Score=271.55  Aligned_cols=187  Identities=22%  Similarity=0.231  Sum_probs=153.1

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCC-----CCCCcCCCCcccc
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP-----DILDLKDTSPLLS  794 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~-----~~~d~~g~t~L~~  794 (1011)
                      |.||||+|+..|+ .+++++|++..|++++.++..|.||||+|+..|+.+++++|++.|+++     +..+..|.||||+
T Consensus         3 g~t~L~~A~~~g~-~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~   81 (232)
T 2rfa_A            3 WESPLLLAAKEND-VQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI   81 (232)
T ss_dssp             TTCHHHHHHHTTC-HHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred             CCCHHHHHHHcCC-HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence            6788888888888 788888887767888888888888888888888888888888887776     5566678888888


Q ss_pred             cccCChHHHHHHHHHcCCCccccc------------cCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHH
Q psy8109         795 SCRQGLYEIVDTLLEYNADTNLRT------------IKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA  862 (1011)
Q Consensus       795 A~~~g~~~iv~~Ll~~g~~~~~~~------------~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A  862 (1011)
                      |+..|+.++|++|+++|++++...            +..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus        82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A  161 (232)
T 2rfa_A           82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL  161 (232)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence            888888888888888888777632            12688888888888888888888888888888888888888888


Q ss_pred             HHcCCHHHH----HHHHhcCCCc------ccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109         863 CQAKNWDIV----TFLLDAGSNI------EKATKYRMTFESSKVVEKHVAKLRAA  907 (1011)
Q Consensus       863 ~~~g~~~iv----~~Ll~~ga~~------~~~~~~g~t~l~~a~~~~~~~~~~~~  907 (1011)
                      +..|+.+++    ++|+++|+++      +..|..|+|||++|+..|+.++++.+
T Consensus       162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~L  216 (232)
T 2rfa_A          162 ILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL  216 (232)
T ss_dssp             HTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             HHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence            888888877    8888888887      57788888888888888888888765

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=9.6e-31  Score=274.80  Aligned_cols=209  Identities=21%  Similarity=0.250  Sum_probs=182.4

Q ss_pred             CCCCcchHHHHHHHcCCHHHHHHHHHCCC----CCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCc
Q psy8109         210 SHSQGYKALCWALQEKKTDIAKLLVDKGV----PLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPL  285 (1011)
Q Consensus       210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~----~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~  285 (1011)
                      .+..|.||||+|+..|+.+++++|++.+.    +++..+.           .|.||||.|+..|+.++|++|+++|++++
T Consensus         4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~   72 (236)
T 1ikn_D            4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-----------LQQTPLHLAVITNQPEIAEALLGAGCDPE   72 (236)
T ss_dssp             ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCT-----------TCCCHHHHHHHTTCHHHHHCCCSCCCCSC
T ss_pred             CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            36789999999999999999999998765    5666655           89999999999999999999999999998


Q ss_pred             ccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCC----CCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCC-CC
Q psy8109         286 AIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK----SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGND-DG  360 (1011)
Q Consensus       286 ~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~----~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~-~g  360 (1011)
                      ..+.. |.||||+|+..|+.+++++|+++++.+    .++..+..|.||||+|+..|+.++|++|+++|++++..+. .|
T Consensus        73 ~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g  151 (236)
T 1ikn_D           73 LRDFR-GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNG  151 (236)
T ss_dssp             CCCTT-CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTC
T ss_pred             CcCCC-CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence            87776 999999999999999999999998732    2567888999999999999999999999999999999997 99


Q ss_pred             CcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc-Cc--cCCCCCCCcHhHH
Q psy8109         361 CTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI-NI--NHQDKDGWTPLTC  430 (1011)
Q Consensus       361 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~--~~~~~~~~t~l~~  430 (1011)
                      .||||+|+..|+.++|++|+++|++++.. ..|.|||++|+..|+.+++++|+++| +.  ...+..+.++...
T Consensus       152 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~  225 (236)
T 1ikn_D          152 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT  225 (236)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhh
Confidence            99999999999999999999999999987 77899999999999999999999987 22  3555666665543

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=1.2e-29  Score=259.18  Aligned_cols=188  Identities=24%  Similarity=0.306  Sum_probs=161.9

Q ss_pred             CCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccC
Q psy8109         719 YYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQ  798 (1011)
Q Consensus       719 ~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~  798 (1011)
                      ++.|||+.|+..|+ .++++.|+...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus         4 ~~~~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~   82 (201)
T 3hra_A            4 YEVGALLEAANQRD-TKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ   82 (201)
T ss_dssp             CCTTHHHHHHHTTC-HHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             ccccHHHHHHHhcc-HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            37788888888888 88888888876668888888888999999988999999999998888888888888999999988


Q ss_pred             ChHHHHHHHH-HcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhcc-CCcccccCCCCCHHHHHHHcCC-----HHHH
Q psy8109         799 GLYEIVDTLL-EYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN-ADINAEDKYGKIAFHSACQAKN-----WDIV  871 (1011)
Q Consensus       799 g~~~iv~~Ll-~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-a~in~~d~~g~taL~~A~~~g~-----~~iv  871 (1011)
                      |+.+++++|+ ..+++++. .+..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++     .+++
T Consensus        83 ~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v  161 (201)
T 3hra_A           83 GRTEILAYMLKHATPDLNK-HNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV  161 (201)
T ss_dssp             TCHHHHHHHHHHSCCCTTC-CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred             CCHHHHHHHHhccCccccc-ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence            9999999888 55567776 7778888999999999999999998888 8888888888999999988887     8889


Q ss_pred             HHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhh
Q psy8109         872 TFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAAN  908 (1011)
Q Consensus       872 ~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~  908 (1011)
                      ++|+++|++++..|..|.|||++|+..|+.++++.+.
T Consensus       162 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll  198 (201)
T 3hra_A          162 KLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA  198 (201)
T ss_dssp             HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             HHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHH
Confidence            9999999998888888899999999888888887653

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=3.7e-29  Score=255.62  Aligned_cols=190  Identities=27%  Similarity=0.358  Sum_probs=177.3

Q ss_pred             CCcchHHHHHHHcCCHHHHHHHHHCCC-CCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q psy8109         212 SQGYKALCWALQEKKTDIAKLLVDKGV-PLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKS  290 (1011)
Q Consensus       212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~g~-~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~  290 (1011)
                      ..+.|+|++||..|+.+.++.|+..+. +++..+.           .|.||||.|+..|+.++|++|+++|++++..+..
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~   71 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDT-----------EGNTPLNIAVHNNDIEIAKALIDRGADINLQNSI   71 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCT-----------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence            567899999999999999999999876 8877766           8999999999999999999999999999887776


Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHc-CCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCC-CCCccCCCCCCcHHHHHH
Q psy8109         291 RNRTALHVAAIVESVDIVKLLFDY-GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKG-ADINSGNDDGCTPLFCAI  368 (1011)
Q Consensus       291 ~g~t~L~~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-a~~n~~~~~g~t~L~~A~  368 (1011)
                       |.||||+|+..|+.+++++|+++ ++  +++..+..|.||||+|+..|+.+++++|+++| ++++..+..|.||||+|+
T Consensus        72 -g~t~l~~A~~~~~~~~~~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~  148 (201)
T 3hra_A           72 -SDSPYLYAGAQGRTEILAYMLKHATP--DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAV  148 (201)
T ss_dssp             -SCCHHHHHHHTTCHHHHHHHHHHSCC--CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHH
T ss_pred             -CCCHHHHHHHcCCHHHHHHHHhccCc--ccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHH
Confidence             99999999999999999999954 55  78889999999999999999999999999999 999999999999999999


Q ss_pred             HcCC-----hhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109         369 AQNC-----LEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI  415 (1011)
Q Consensus       369 ~~g~-----~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~  415 (1011)
                      ..|+     .+++++|+++|++++.. ..|.|||++|+..|+.+++++|+++|
T Consensus       149 ~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          149 GLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            9998     99999999999999987 77899999999999999999999864

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.96  E-value=3.7e-30  Score=276.80  Aligned_cols=217  Identities=19%  Similarity=0.185  Sum_probs=160.5

Q ss_pred             CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCC
Q psy8109         642 NIDVNHKTKDGSTALFFACYDKRLDLVEILLE----ANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEA  717 (1011)
Q Consensus       642 g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~  717 (1011)
                      ++..+..+..|.||||.|+..|+.++++.|++    .+++++...                             ...+. 
T Consensus         3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-----------------------------~~~~~-   52 (273)
T 2pnn_A            3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSE-----------------------------FKDPE-   52 (273)
T ss_dssp             --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGG-----------------------------GSCTT-
T ss_pred             cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcc-----------------------------cccCc-
Confidence            44556678888999999999999888887776    344433100                             00111 


Q ss_pred             CCCCcHHHHHHHC---CCHHHHHHHHHHhcCCC-----------cccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCC
Q psy8109         718 CYYMTPLHYASYR---GDCNDIARFLVEECNAD-----------ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDI  783 (1011)
Q Consensus       718 ~~~~t~l~~A~~~---g~~~~iv~~Ll~~~g~~-----------~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~  783 (1011)
                       .|.||||+|+..   |+ .+++++|++. |++           +...+..|.||||+|+..|+.++|++|+++|++++.
T Consensus        53 -~g~tpL~~A~~~~~~g~-~~~v~~Ll~~-ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~  129 (273)
T 2pnn_A           53 -TGKTCLLKAMLNLHNGQ-NDTIALLLDV-ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA  129 (273)
T ss_dssp             -TCCCHHHHHHHSCBTTB-CHHHHHHHHH-HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             -CCCCHHHHHHHHHhcCC-hHHHHHHHHh-hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence             155566666554   55 5566666655 332           233567899999999999999999999999999999


Q ss_pred             CCc--------------CCCCcccccccCChHHHHHHHHH---cCCCccccccCCCChHHHHHHHcCC---------HHH
Q psy8109         784 LDL--------------KDTSPLLSSCRQGLYEIVDTLLE---YNADTNLRTIKHGSTALHTAAFHNQ---------LDI  837 (1011)
Q Consensus       784 ~d~--------------~g~t~L~~A~~~g~~~iv~~Ll~---~g~~~~~~~~~~g~t~L~~Aa~~g~---------~~i  837 (1011)
                      .+.              .|.||||+|+..|+.++|++|++   +|++++. .+..|+||||+|+..|+         .++
T Consensus       130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~-~d~~g~tpLh~A~~~~~~~~~~~~~~~~~  208 (273)
T 2pnn_A          130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA-RDSVGNTVLHALVEVADNTVDNTKFVTSM  208 (273)
T ss_dssp             CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred             cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee-eCCCCCcHHHHHHHccCcchhHHHHHHHH
Confidence            987              79999999999999999999999   9999997 78899999999999998         899


Q ss_pred             HHHHHhccCCcc-------cccCCCCCHHHHHHHcCCHHHHHHHHhcCC-CcccccccCCCHH
Q psy8109         838 IKLLLKYNADIN-------AEDKYGKIAFHSACQAKNWDIVTFLLDAGS-NIEKATKYRMTFE  892 (1011)
Q Consensus       838 v~~Ll~~ga~in-------~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga-~~~~~~~~g~t~l  892 (1011)
                      +++|+++|+++|       .+|..|+||||+|+..|+.++|++|+++|| |+......+.+|-
T Consensus       209 v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~  271 (273)
T 2pnn_A          209 YNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH  271 (273)
T ss_dssp             HHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred             HHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence            999999999997       489999999999999999999999999999 8887766666553

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.96  E-value=1e-29  Score=270.56  Aligned_cols=190  Identities=24%  Similarity=0.292  Sum_probs=172.9

Q ss_pred             CcchHHHHHHHcCCHH----HHHHHHHCCCCCCc----ccCCCCCccccCCCCCChHHHHHHHc---CCHHHHHHHHHcC
Q psy8109         213 QGYKALCWALQEKKTD----IAKLLVDKGVPLNL----VDKGVPLNYSRRIIETDTPLHSAILN---SDIELVKLLLEKG  281 (1011)
Q Consensus       213 ~g~t~L~~Aa~~G~~~----iv~~Ll~~g~~~~~----~~~~~~~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~g  281 (1011)
                      .|+|+||+||..|+.+    ++++|++.|++++.    .+.           .|.||||.|+..   |+.++|++|++.|
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~-----------~g~t~L~~A~~~~~~g~~~~v~~Ll~~g   69 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGS-----------TGKTCLMKAVLNLQDGVNACIMPLLQID   69 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTT-----------TTBCHHHHHHHTCBTTBCTTHHHHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCC-----------CCCCHHHHHHHccccchHHHHHHHHhcC
Confidence            3789999999999997    67888889999987    555           899999999999   9999999999999


Q ss_pred             CCCcccc----------cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCC-------------CCCHHHHHHhcC
Q psy8109         282 ANPLAIE----------KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVA-------------GLTPLHIACRRK  338 (1011)
Q Consensus       282 ~~~~~~~----------~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~-------------g~t~L~~Aa~~g  338 (1011)
                      ++++...          +..|.||||+|+..|+.++|++|+++|+  +++..+..             |.||||+|+..|
T Consensus        70 ~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~  147 (256)
T 2etb_A           70 KDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGA--DVHLRACGRFFQKHQGTCFYFGELPLSLAACTK  147 (256)
T ss_dssp             HHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTT
T ss_pred             CcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCC--CCCcccccccccccccccccCCCCHHHHHHHcC
Confidence            8776433          2349999999999999999999999999  78888776             999999999999


Q ss_pred             cHHHHHHHHH---CCCCCccCCCCCCcHHHHHHH--cCChh-------HHHHHHhcCCCC-------CCC-CCCCcHHHH
Q psy8109         339 CLEIVKILLD---KGADINSGNDDGCTPLFCAIA--QNCLE-------VFNYLVNHGCDL-------SVP-EGERTALHM  398 (1011)
Q Consensus       339 ~~~iv~~Ll~---~ga~~n~~~~~g~t~L~~A~~--~g~~~-------iv~~Ll~~g~~~-------~~~-~~~~t~L~~  398 (1011)
                      +.++|++|++   +|++++..|..|+||||+|+.  .|+.+       ++++|+++|+++       +.. ..|.||||+
T Consensus       148 ~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~  227 (256)
T 2etb_A          148 QWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKL  227 (256)
T ss_dssp             CHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHH
T ss_pred             CHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHH
Confidence            9999999999   999999999999999999999  78888       999999999998       655 778999999


Q ss_pred             HHhcCCHHHHHHHHhcc
Q psy8109         399 ASQFGNLEMVNYLLKHI  415 (1011)
Q Consensus       399 Aa~~g~~~iv~~Ll~~~  415 (1011)
                      |+..|+.+++++|++++
T Consensus       228 A~~~g~~~~v~~Ll~~g  244 (256)
T 2etb_A          228 AAKEGKIEIFRHILQRE  244 (256)
T ss_dssp             HHHTTCHHHHHHHHHHH
T ss_pred             HHHhCCHHHHHHHHhCC
Confidence            99999999999999986

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.96  E-value=4.5e-30  Score=273.38  Aligned_cols=186  Identities=21%  Similarity=0.212  Sum_probs=146.2

Q ss_pred             CCCcHHHHHHHCCCHHH----HHHHHHHhcCCCccc----ccCCCccHHHHHHhC---CCHHHHHHHHHCCCCCCCC---
Q psy8109         719 YYMTPLHYASYRGDCND----IARFLVEECNADITL----RNFNNRTALNFAAFG---NNLDLLKFLLKAGADPDIL---  784 (1011)
Q Consensus       719 ~~~t~l~~A~~~g~~~~----iv~~Ll~~~g~~~~~----~~~~g~t~L~~Aa~~---g~~~iv~~Ll~~gad~~~~---  784 (1011)
                      +|.||||.|+..|+ .+    ++++|++. |++++.    .+..|.||||+|+..   |+.++|++|++.|++++..   
T Consensus         1 ~G~t~L~~A~~~g~-~~~v~~ll~~l~~~-g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~   78 (256)
T 2etb_A            1 FDRDRLFSVVSRGV-PEELTGLLEYLRWN-SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL   78 (256)
T ss_dssp             CCHHHHHHHHHHTC-GGGGTTHHHHHHHH-TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred             CCccHHHHHHHcCC-HHHHHHHHHHHHHc-CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence            46788888888887 54    55666666 778777    777888888888887   8888888888887766533   


Q ss_pred             --------CcCCCCcccccccCChHHHHHHHHHcCCCccccccCC-------------CChHHHHHHHcCCHHHHHHHHh
Q psy8109         785 --------DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH-------------GSTALHTAAFHNQLDIIKLLLK  843 (1011)
Q Consensus       785 --------d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~-------------g~t~L~~Aa~~g~~~iv~~Ll~  843 (1011)
                              |..|.||||+|+..|+.++|++|+++|++++. .+..             |.||||+|+..|+.++|++|++
T Consensus        79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~  157 (256)
T 2etb_A           79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL-RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE  157 (256)
T ss_dssp             GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred             cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence                    35688888888888888888888888888776 3333             8888888888888888888888


Q ss_pred             ---ccCCcccccCCCCCHHHHHHH--cCCHH-------HHHHHHhcCCCc-------ccccccCCCHHhhHHhhCCHHHH
Q psy8109         844 ---YNADINAEDKYGKIAFHSACQ--AKNWD-------IVTFLLDAGSNI-------EKATKYRMTFESSKVVEKHVAKL  904 (1011)
Q Consensus       844 ---~ga~in~~d~~g~taL~~A~~--~g~~~-------iv~~Ll~~ga~~-------~~~~~~g~t~l~~a~~~~~~~~~  904 (1011)
                         +|+++|.+|..|+||||+|+.  .++.+       ++++|+++|+++       +..|..|.||||+|+..|+.+++
T Consensus       158 ~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v  237 (256)
T 2etb_A          158 NPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIF  237 (256)
T ss_dssp             CSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             ccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHH
Confidence               788888888888888888887  77777       888888888888       77888888888888888888888


Q ss_pred             HHh
Q psy8109         905 RAA  907 (1011)
Q Consensus       905 ~~~  907 (1011)
                      +.+
T Consensus       238 ~~L  240 (256)
T 2etb_A          238 RHI  240 (256)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            765

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.96  E-value=2.9e-29  Score=269.80  Aligned_cols=208  Identities=23%  Similarity=0.280  Sum_probs=168.7

Q ss_pred             CCCCcchHHHHHHHcCCHHHHHHHHH----CCCCCCcccCCCCCccccCCCCCChHHHHHHHc---CCHHHHHHHHHcCC
Q psy8109         210 SHSQGYKALCWALQEKKTDIAKLLVD----KGVPLNLVDKGVPLNYSRRIIETDTPLHSAILN---SDIELVKLLLEKGA  282 (1011)
Q Consensus       210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~----~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~g~  282 (1011)
                      .+..|.|+||+||..|+.++|+.|++    .+++++....       .....|.||||+|+..   |+.++|++|++.|+
T Consensus         9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-------~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga   81 (273)
T 2pnn_A            9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEF-------KDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR   81 (273)
T ss_dssp             --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGG-------SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCccc-------ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence            46789999999999999998888886    4555542110       1123899999999987   99999999999987


Q ss_pred             CCccc----------ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCC--------------CCCCHHHHHHhcC
Q psy8109         283 NPLAI----------EKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNV--------------AGLTPLHIACRRK  338 (1011)
Q Consensus       283 ~~~~~----------~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~--------------~g~t~L~~Aa~~g  338 (1011)
                      ++...          .+..|.||||+|+..|+.++|++|+++|+  +++..+.              .|.||||+|+..|
T Consensus        82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g  159 (273)
T 2pnn_A           82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGA--DVQAAANGDFFKKTKGRPGFYFGELPLSLAACTN  159 (273)
T ss_dssp             HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT
T ss_pred             cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCC--CcCccccccccccccccccccCCCCHHHHHHHcC
Confidence            53211          12349999999999999999999999999  7888876              7999999999999


Q ss_pred             cHHHHHHHHH---CCCCCccCCCCCCcHHHHHHHcCC---------hhHHHHHHhcCCCCCC--------CCCCCcHHHH
Q psy8109         339 CLEIVKILLD---KGADINSGNDDGCTPLFCAIAQNC---------LEVFNYLVNHGCDLSV--------PEGERTALHM  398 (1011)
Q Consensus       339 ~~~iv~~Ll~---~ga~~n~~~~~g~t~L~~A~~~g~---------~~iv~~Ll~~g~~~~~--------~~~~~t~L~~  398 (1011)
                      +.++|++|++   +|++++..+..|.||||+|+..|+         .+++++|+++|++++.        ...|.|||++
T Consensus       160 ~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~  239 (273)
T 2pnn_A          160 QLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLAL  239 (273)
T ss_dssp             CHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHH
T ss_pred             CHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHH
Confidence            9999999999   999999999999999999999998         8999999999999863        3778999999


Q ss_pred             HHhcCCHHHHHHHHhcc--CccCCCCCCCc
Q psy8109         399 ASQFGNLEMVNYLLKHI--NINHQDKDGWT  426 (1011)
Q Consensus       399 Aa~~g~~~iv~~Ll~~~--~~~~~~~~~~t  426 (1011)
                      |+..|+.+++++|+++|  ++......+++
T Consensus       240 A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~  269 (273)
T 2pnn_A          240 AASSGKIGVLAYILQREIHEPECRHAAAHH  269 (273)
T ss_dssp             HHHTTCHHHHHHHHHHHTC-----------
T ss_pred             HHHhChHHHHHHHHHCCCCCchhhhhhhhh
Confidence            99999999999999987  34444343333

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.95  E-value=3e-28  Score=259.98  Aligned_cols=196  Identities=22%  Similarity=0.246  Sum_probs=169.5

Q ss_pred             CCCcchHHHHHHHcCCHHH----HHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHH---HcCCHHHHHHHHHcCCC
Q psy8109         211 HSQGYKALCWALQEKKTDI----AKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAI---LNSDIELVKLLLEKGAN  283 (1011)
Q Consensus       211 ~~~g~t~L~~Aa~~G~~~i----v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~---~~g~~~iv~~Ll~~g~~  283 (1011)
                      +..|+++|+.||+.|+.+.    +++|++.|++++..+.       .....|.||||.|+   ..|+.++|++|++.|++
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~-------~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~   74 (260)
T 3jxi_A            2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEF-------REPSTGKTCLPKALLNLSAGRNDTIPILLDIAEK   74 (260)
T ss_dssp             CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGG-------SCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhh-------hccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccc
Confidence            3568899999999999995    5555558998876652       11126999999999   77999999999998865


Q ss_pred             Cccc----------ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccC--------------CCCCCHHHHHHhcCc
Q psy8109         284 PLAI----------EKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQN--------------VAGLTPLHIACRRKC  339 (1011)
Q Consensus       284 ~~~~----------~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~--------------~~g~t~L~~Aa~~g~  339 (1011)
                      +...          .+..|+||||+|+..|+.++|++|+++|+  +++..+              ..|.||||+|+..|+
T Consensus        75 ~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~  152 (260)
T 3jxi_A           75 TGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGA--DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ  152 (260)
T ss_dssp             TTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC
T ss_pred             ccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCC--CcCccccccccCcccccccccCCCCHHHHHHHcCC
Confidence            3221          11149999999999999999999999999  788887              689999999999999


Q ss_pred             HHHHHHHHH---CCCCCccCCCCCCcHHHHHHHcCC---------hhHHHHHHhcCCCC-------CCC-CCCCcHHHHH
Q psy8109         340 LEIVKILLD---KGADINSGNDDGCTPLFCAIAQNC---------LEVFNYLVNHGCDL-------SVP-EGERTALHMA  399 (1011)
Q Consensus       340 ~~iv~~Ll~---~ga~~n~~~~~g~t~L~~A~~~g~---------~~iv~~Ll~~g~~~-------~~~-~~~~t~L~~A  399 (1011)
                      .++|++|++   +|++++..|..|+||||+|+..|+         .+++++|+++|+++       +.. ..|.||||+|
T Consensus       153 ~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A  232 (260)
T 3jxi_A          153 PHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA  232 (260)
T ss_dssp             HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred             HHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHH
Confidence            999999999   999999999999999999999888         79999999999998       334 7789999999


Q ss_pred             HhcCCHHHHHHHHhcc
Q psy8109         400 SQFGNLEMVNYLLKHI  415 (1011)
Q Consensus       400 a~~g~~~iv~~Ll~~~  415 (1011)
                      +..|+.+++++|++++
T Consensus       233 ~~~g~~~~v~~Ll~~g  248 (260)
T 3jxi_A          233 AKTGKIGIFQHIIRRE  248 (260)
T ss_dssp             HHTTCHHHHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHhC
Confidence            9999999999999987

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.95  E-value=3.2e-28  Score=259.70  Aligned_cols=185  Identities=18%  Similarity=0.177  Sum_probs=93.9

Q ss_pred             CCcHHHHHHHCCCHHHH----HHHHHHhcCCCccccc----CCCccHHHHHH---hCCCHHHHHHHHHCCCC--------
Q psy8109         720 YMTPLHYASYRGDCNDI----ARFLVEECNADITLRN----FNNRTALNFAA---FGNNLDLLKFLLKAGAD--------  780 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~i----v~~Ll~~~g~~~~~~~----~~g~t~L~~Aa---~~g~~~iv~~Ll~~gad--------  780 (1011)
                      +.++||.|+..|+ .+.    +++|++. +++++..+    ..|.||||+|+   ..|+.++|++|++.|++        
T Consensus         5 ~~~~L~~A~~~g~-~~~v~~ll~~l~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~   82 (260)
T 3jxi_A            5 NRPILFDIVSRGS-PDGLEGLLSFLLTH-KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI   82 (260)
T ss_dssp             CHHHHHHHHHHTC-GGGGTTHHHHHHHH-TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred             hHHHHHHHHHhCC-HHHHHHHHHHHHhc-CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence            4455555555555 342    2222223 44444433    33555555555   34555555555554422        


Q ss_pred             ---CCCCCcCCCCcccccccCChHHHHHHHHHcCCCcccccc-------------CCCChHHHHHHHcCCHHHHHHHHh-
Q psy8109         781 ---PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTI-------------KHGSTALHTAAFHNQLDIIKLLLK-  843 (1011)
Q Consensus       781 ---~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~-------------~~g~t~L~~Aa~~g~~~iv~~Ll~-  843 (1011)
                         ++..|..|.||||+|+..|+.++|++|+++|++++....             ..|.||||+|+..|+.++|++|++ 
T Consensus        83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~  162 (260)
T 3jxi_A           83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN  162 (260)
T ss_dssp             TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred             cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence               222333455555555555555555555555555554211             345555555555555555555555 


Q ss_pred             --ccCCcccccCCCCCHHHHHHHcCC---------HHHHHHHHhcCCCc-------ccccccCCCHHhhHHhhCCHHHHH
Q psy8109         844 --YNADINAEDKYGKIAFHSACQAKN---------WDIVTFLLDAGSNI-------EKATKYRMTFESSKVVEKHVAKLR  905 (1011)
Q Consensus       844 --~ga~in~~d~~g~taL~~A~~~g~---------~~iv~~Ll~~ga~~-------~~~~~~g~t~l~~a~~~~~~~~~~  905 (1011)
                        +|++++.+|..|+||||+|+..++         .+++++|+++|+++       +..|..|+||||+|+..|+.++++
T Consensus       163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~  242 (260)
T 3jxi_A          163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ  242 (260)
T ss_dssp             SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence              555555555555555555555444         45555555555555       445555555555555555555554


Q ss_pred             H
Q psy8109         906 A  906 (1011)
Q Consensus       906 ~  906 (1011)
                      .
T Consensus       243 ~  243 (260)
T 3jxi_A          243 H  243 (260)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.95  E-value=8.6e-28  Score=238.59  Aligned_cols=170  Identities=22%  Similarity=0.228  Sum_probs=153.9

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG  799 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g  799 (1011)
                      +.+|||.|+..|+ .+++++|++..+..++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus         2 ~~~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   80 (172)
T 3v30_A            2 DSLSIHQLAAQGE-LDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG   80 (172)
T ss_dssp             --CCHHHHHHTTC-HHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             chhhHHHHHHcCC-HHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC
Confidence            4689999999999 999999999844458999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109         800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS  879 (1011)
Q Consensus       800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga  879 (1011)
                      +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus        81 ~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~  159 (172)
T 3v30_A           81 YTDIVGLLLERDVDINI-YDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL  159 (172)
T ss_dssp             CHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence            99999999999999997 77899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccccCCCH
Q psy8109         880 NIEKATKYRMTF  891 (1011)
Q Consensus       880 ~~~~~~~~g~t~  891 (1011)
                      ++...+..|.||
T Consensus       160 ~~~~~~~~~~~p  171 (172)
T 3v30_A          160 KLFQSNLVPADP  171 (172)
T ss_dssp             HHSCC-------
T ss_pred             HHhcccCCCCCC
Confidence            998888888776

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.95  E-value=8.7e-27  Score=230.42  Aligned_cols=161  Identities=33%  Similarity=0.457  Sum_probs=142.8

Q ss_pred             CCCCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q psy8109         209 LSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIE  288 (1011)
Q Consensus       209 ~~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~  288 (1011)
                      .....+.++|++||..|+.++|++|++.|++++..+.           .|.||||.|+..|+.++|++|+++|++++..+
T Consensus         9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~   77 (169)
T 2y1l_E            9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDA-----------SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD   77 (169)
T ss_dssp             ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred             cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence            3456678999999999999999999999999887776           78899999999999999999999999988777


Q ss_pred             cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHH
Q psy8109         289 KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAI  368 (1011)
Q Consensus       289 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~  368 (1011)
                      .. |.||||+|+..|+.+++++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+
T Consensus        78 ~~-g~t~L~~A~~~~~~~~~~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~  154 (169)
T 2y1l_E           78 HA-GMTPLRLAALFGHLEIVEVLLKNGA--DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISI  154 (169)
T ss_dssp             TT-SCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CC-CCCHHHHHHHcCCHHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence            66 8999999999999999999999998  78888999999999999999999999999999999999999999999999


Q ss_pred             HcCChhHHHHHHhcC
Q psy8109         369 AQNCLEVFNYLVNHG  383 (1011)
Q Consensus       369 ~~g~~~iv~~Ll~~g  383 (1011)
                      ..|+.+++++|++.|
T Consensus       155 ~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E          155 DNGNEDLAEILQKLN  169 (169)
T ss_dssp             HTTCHHHHHHHHTC-
T ss_pred             HhCCHHHHHHHHHcC
Confidence            999999999998876

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.95  E-value=1.1e-29  Score=281.94  Aligned_cols=278  Identities=12%  Similarity=0.123  Sum_probs=181.5

Q ss_pred             cchHHHHHHH-cCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCc---cccc
Q psy8109         214 GYKALCWALQ-EKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPL---AIEK  289 (1011)
Q Consensus       214 g~t~L~~Aa~-~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~---~~~~  289 (1011)
                      +.+++++|+. .++.+++++|+++|++                  +.||||.|+..|+.++|++|++.|+...   ..+.
T Consensus        65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~------------------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~  126 (376)
T 2aja_A           65 QLLCLYYAHYNRNAKQLWSDAHKKGIK------------------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA  126 (376)
T ss_dssp             HHHHHHHHHTTTTCTTHHHHHHHHTCC------------------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHcCCC------------------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhcc
Confidence            4567888877 5788999999988764                  4599999999999999999999988321   1222


Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHHcCCCCC-CcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCcc--CCCCCCcHHHH
Q psy8109         290 SRNRTALHVAAIVESVDIVKLLFDYGAEKS-VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINS--GNDDGCTPLFC  366 (1011)
Q Consensus       290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~-~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~--~~~~g~t~L~~  366 (1011)
                       .|.||||+||..|+.++|++|+++|++.. .+..+.+ .||||+||..|+.++|++|+++|++++.  .+..|.||||+
T Consensus       127 -~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~  204 (376)
T 2aja_A          127 -ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRW  204 (376)
T ss_dssp             -HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHH
Confidence             27789999999999999999999997311 1222233 8999999999999999999999999877  78889999999


Q ss_pred             HH-HcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcCCCHH-----
Q psy8109         367 AI-AQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQASLE-----  439 (1011)
Q Consensus       367 A~-~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~-----  439 (1011)
                      |+ ..|+.++|++|+++|+.      +.|||+.|+..|+.+++++|++++ +++..+    ++++.|... ++++     
T Consensus       205 Aa~~~G~~eiv~~Ll~~ga~------~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~-g~~~vv~~~  273 (376)
T 2aja_A          205 AAVGRGHHNVINFLLDCPVM------LAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPD-GVFDLVTKS  273 (376)
T ss_dssp             HHSTTCCHHHHHHHTTSHHH------HHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSS-SCCCCSSHH
T ss_pred             HHHHCCCHHHHHHHHhCCCc------cchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHC-CChhhhcHH
Confidence            99 99999999999998753      579999999999999999999886 333222    122222211 1222     


Q ss_pred             -------HHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcc------CCCCCCCCCCcHHHHHHHcCCHHHH
Q psy8109         440 -------VFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHI------DINSENDLGKTPIYFAIKNNHLEIF  506 (1011)
Q Consensus       440 -------i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~------~~~~~~~~g~t~L~~A~~~g~~~iv  506 (1011)
                             +++.|+..+.                  .+..+.+++|++..      ........+.+||++|+..|+.+++
T Consensus       274 ~~~~~~~~~~~li~~~~------------------~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v  335 (376)
T 2aja_A          274 ECLQGFYMLRNLIRRND------------------EVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGAC  335 (376)
T ss_dssp             HHHHHHHHHHHHHHHCC------------------GGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHH
T ss_pred             hhhhhHHHHHHHHHcch------------------hhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHH
Confidence                   2233333321                  12355666666511      0111222345667777777777777


Q ss_pred             HHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHH
Q psy8109         507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLL  543 (1011)
Q Consensus       507 ~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll  543 (1011)
                      ++|++.|   ...+..+.|++..|-..|+.++.+.-+
T Consensus       336 ~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~  369 (376)
T 2aja_A          336 ALLLSIP---SVLALTKANNYYINETGGRLDLRAVAL  369 (376)
T ss_dssp             HHHTTSH---HHHHSCC--------------------
T ss_pred             HHHHcCh---HHHHHHHHhccccccccccccHHHHHH
Confidence            7777643   345556666666666666666655443

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.95  E-value=1.2e-27  Score=256.94  Aligned_cols=186  Identities=23%  Similarity=0.258  Sum_probs=172.4

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCC--cccccCCCccHHHHHHhCCCHHHHHHHHHCCC-CCCCCCcCCCCcccccc
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNAD--ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA-DPDILDLKDTSPLLSSC  796 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~--~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga-d~~~~d~~g~t~L~~A~  796 (1011)
                      ..+++|.|+..++ .+.++.++.. +.+  +|..|..|.||||+|+..|+.++|++|++.|+ +++..+..|.||||+|+
T Consensus        76 ~~~~l~~a~~~~~-~~~~~~l~~~-~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~  153 (276)
T 4hbd_A           76 CRSDAHPELVRRH-LVTFRAMSAR-LLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA  153 (276)
T ss_dssp             HSTTCCHHHHHHH-HHHHHHHCHH-HHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred             hccCCCHHHHHHH-HHHHHHHHHH-HHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence            4567888888888 7888888765 444  78899999999999999999999999999998 99999999999999999


Q ss_pred             -----cCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHH
Q psy8109         797 -----RQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV  871 (1011)
Q Consensus       797 -----~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv  871 (1011)
                           ..++.+++++|++.|..++. .+..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.++|
T Consensus       154 ~~~~~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv  232 (276)
T 4hbd_A          154 LATLKTQDDIETVLQLFRLGNINAK-ASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIA  232 (276)
T ss_dssp             GCCCCSHHHHHHHHHHHHHSCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred             HHHhhhhhhHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence                 67899999999999988876 778899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHh-cCCCcccccccCCCHHhhHHhhCCHHHHHHhh
Q psy8109         872 TFLLD-AGSNIEKATKYRMTFESSKVVEKHVAKLRAAN  908 (1011)
Q Consensus       872 ~~Ll~-~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~  908 (1011)
                      ++|++ .|++++..|..|.|||++|+..|+.++++.+-
T Consensus       233 ~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll  270 (276)
T 4hbd_A          233 GLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLY  270 (276)
T ss_dssp             HHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             HHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            99999 89999999999999999999999999998763

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.94  E-value=6e-30  Score=284.00  Aligned_cols=272  Identities=15%  Similarity=0.090  Sum_probs=186.4

Q ss_pred             CHHHHHHH-cCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCc---ccCCCCCCcHHHHHHHcC
Q psy8109         588 SPLHLACA-TGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDV---NHKTKDGSTALFFACYDK  663 (1011)
Q Consensus       588 t~l~~A~~-~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~---~~~~~~g~t~L~~A~~~g  663 (1011)
                      +.++.+.. .++.++++++...      +..+.||||.|+..|+.+++++|++ .|+..   +..+..+.||||+|+..|
T Consensus        67 l~~~~a~~~~~~~~~~~~l~~~------g~~~~T~Lh~Aa~~G~~e~v~~Ll~-~ga~~~~~~~~~~~~~tpL~~Aa~~G  139 (376)
T 2aja_A           67 LCLYYAHYNRNAKQLWSDAHKK------GIKSEVICFVAAITGCSSALDTLCL-LLTSDEIVKVIQAENYQAFRLAAENG  139 (376)
T ss_dssp             HHHHHHHTTTTCTTHHHHHHHH------TCCHHHHHHHHHHHCCHHHHHHHTT-C--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCHHHHHHHHHc------CCCcCCHHHHHHHcCCHHHHHHHHH-cCCcHHHHHHhccCCCCHHHHHHHcC
Confidence            34555554 4566777777652      1234589999999999999999988 56522   233445678999999999


Q ss_pred             CHHHHHHHHHCCCCC---cCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCc--cCCCCCCCcHHHHHH-HCCCHHHHH
Q psy8109         664 RLDLVEILLEANADV---NLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNL--TNEACYYMTPLHYAS-YRGDCNDIA  737 (1011)
Q Consensus       664 ~~~iv~~Ll~~ga~~---~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~--~~~~~~~~t~l~~A~-~~g~~~~iv  737 (1011)
                      +.+++++|+++|+++   +......||||.|+. .|+.+++++|+++|++++.  .+..  |.||||+|+ ..|+ .+++
T Consensus       140 ~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~-~G~~eiv~~Ll~~ga~~~~~~~d~~--g~TpL~~Aa~~~G~-~eiv  215 (376)
T 2aja_A          140 HLHVLNRLCELAPTEIMAMIQAENYHAFRLAAE-NGHLHVLNRLCELAPTEATAMIQAE--NYYAFRWAAVGRGH-HNVI  215 (376)
T ss_dssp             CHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHH-TTCHHHHHHHHHSCGGGHHHHHHHH--HHHHHHHHHSTTCC-HHHH
T ss_pred             CHHHHHHHHhCCCCccccccCCCCCCHHHHHHH-CCCHHHHHHHHHcCCccchhccCCC--CCCHHHHHHHHCCC-HHHH
Confidence            999999999998752   222223788888888 8888888888888888765  5555  889999999 9999 9999


Q ss_pred             HHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHH------------H
Q psy8109         738 RFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIV------------D  805 (1011)
Q Consensus       738 ~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv------------~  805 (1011)
                      ++|++. |+       .|.|||+.|+..|+.+++++|+++|++++..+    ++++.|+..|+.+++            +
T Consensus       216 ~~Ll~~-ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~  283 (376)
T 2aja_A          216 NFLLDC-PV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLR  283 (376)
T ss_dssp             HHHTTS-HH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHH
T ss_pred             HHHHhC-CC-------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHH
Confidence            999885 43       27899999999999999999999998876655    588889988887743            4


Q ss_pred             HHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHh---------ccCCcccccCCCCCHHHHHHHcCCHHHHHHHHh
Q psy8109         806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK---------YNADINAEDKYGKIAFHSACQAKNWDIVTFLLD  876 (1011)
Q Consensus       806 ~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~---------~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~  876 (1011)
                      .|+..+.                   .+..+.+++|++         .|+++|    .+.|||++|+..|+.++|++|++
T Consensus       284 ~li~~~~-------------------~~~~~~~~~Ll~~~~vk~l~~~g~~~n----~~~~~L~~A~~~g~~e~v~lLl~  340 (376)
T 2aja_A          284 NLIRRND-------------------EVLLDDIRFLLSIPGIKALAPTATIPG----DANELLRLALRLGNQGACALLLS  340 (376)
T ss_dssp             HHHHHCC-------------------GGGHHHHHHHHTSTTTGGGSSCCSSTT----CCCHHHHHHHHHTCTTHHHHHTT
T ss_pred             HHHHcch-------------------hhHHHHHHHHHhChhhhhhhccCCCCC----CccHHHHHHHHcCcHHHHHHHHc
Confidence            4444431                   123556666665         455554    45689999999999999999998


Q ss_pred             cCCCcccccccCCCHHhhHHhhCCHHHHHHhh
Q psy8109         877 AGSNIEKATKYRMTFESSKVVEKHVAKLRAAN  908 (1011)
Q Consensus       877 ~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~  908 (1011)
                      .|   ...+..+.|++.+|...|+.++.+...
T Consensus       341 ~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~  369 (376)
T 2aja_A          341 IP---SVLALTKANNYYINETGGRLDLRAVAL  369 (376)
T ss_dssp             SH---HHHHSCC--------------------
T ss_pred             Ch---HHHHHHHHhccccccccccccHHHHHH
Confidence            75   667788999999999999999887643

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.94  E-value=3.1e-27  Score=239.23  Aligned_cols=159  Identities=19%  Similarity=0.204  Sum_probs=134.5

Q ss_pred             cccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHH
Q psy8109         748 ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH  827 (1011)
Q Consensus       748 ~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~  827 (1011)
                      ++.+|..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||
T Consensus        28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~  106 (192)
T 2rfm_A           28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGKTPLM  106 (192)
T ss_dssp             HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHH
T ss_pred             HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHH
Confidence            456777888888888888888888888888888888888888888888888888888888888888886 6778888888


Q ss_pred             HHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109         828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA  907 (1011)
Q Consensus       828 ~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  907 (1011)
                      +|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||+++|+..|+.++++.+
T Consensus       107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~L  186 (192)
T 2rfm_A          107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF  186 (192)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHH
Confidence            88888888888888888888888888888888888888888888888888888888888888888888888888888765

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.94  E-value=3.9e-27  Score=231.32  Aligned_cols=157  Identities=27%  Similarity=0.415  Sum_probs=136.7

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG  799 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g  799 (1011)
                      ..|||+.|+..|+ .+++++|++. |++++..+..|.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|
T Consensus         5 ~~~~L~~A~~~g~-~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   81 (162)
T 1ihb_A            5 WGNELASAAARGD-LEQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG   81 (162)
T ss_dssp             CHHHHHHHHHHTC-HHHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             HhhHHHHHHHcCC-HHHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence            5688888888888 8888888887 88888888888999998888 8899999999999888888888899999999999


Q ss_pred             hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCC-cccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109         800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD-INAEDKYGKIAFHSACQAKNWDIVTFLLDAG  878 (1011)
Q Consensus       800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~-in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g  878 (1011)
                      +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|
T Consensus        82 ~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  160 (162)
T 1ihb_A           82 FLDTLQTLLEFQADVNI-EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  160 (162)
T ss_dssp             CHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             CHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence            99999999998888887 777888999999999999999999988887 5888888999999999999999999999888


Q ss_pred             CC
Q psy8109         879 SN  880 (1011)
Q Consensus       879 a~  880 (1011)
                      ||
T Consensus       161 Ad  162 (162)
T 1ihb_A          161 AG  162 (162)
T ss_dssp             --
T ss_pred             CC
Confidence            75

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.94  E-value=5.4e-27  Score=231.55  Aligned_cols=159  Identities=25%  Similarity=0.296  Sum_probs=125.3

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG  799 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g  799 (1011)
                      |.||||.|+..|+ .+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus         3 ~~t~L~~A~~~g~-~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   80 (167)
T 3v31_A            3 NSLSVHQLAAQGE-MLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG   80 (167)
T ss_dssp             TCCCHHHHHHTTC-HHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             CcchHHHHHHCCC-HHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence            6778888888887 7788888777 7777777778888888888888888888888888888777777778888888888


Q ss_pred             hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109         800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS  879 (1011)
Q Consensus       800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga  879 (1011)
                      +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++++
T Consensus        81 ~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~  159 (167)
T 3v31_A           81 YTDIVKMLLDCGVDVNE-YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL  159 (167)
T ss_dssp             CHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence            88888888888777776 66777788888888888888888887788777777778888888888888888888877765


Q ss_pred             Cc
Q psy8109         880 NI  881 (1011)
Q Consensus       880 ~~  881 (1011)
                      ++
T Consensus       160 ~~  161 (167)
T 3v31_A          160 KL  161 (167)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.94  E-value=1.2e-26  Score=229.29  Aligned_cols=156  Identities=36%  Similarity=0.518  Sum_probs=113.3

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG  799 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g  799 (1011)
                      +.++++.|+..|+ .+++++|++. |++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus        14 ~~~~l~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   91 (169)
T 2y1l_E           14 LGKKLLEAARAGR-DDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG   91 (169)
T ss_dssp             HHHHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             ccchHHHHHHcCC-HHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            4567777777777 7777777776 7777777777777777777777777777777777777777777777777777777


Q ss_pred             hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109         800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG  878 (1011)
Q Consensus       800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g  878 (1011)
                      +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++.|
T Consensus        92 ~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E           92 HLEIVEVLLKNGADVNA-NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             CHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            77777777777777765 5666777777777777777777777777777777777777777777777777777777665

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.94  E-value=3e-27  Score=253.74  Aligned_cols=189  Identities=25%  Similarity=0.375  Sum_probs=173.6

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHCCCC--CCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCcccccC
Q psy8109         214 GYKALCWALQEKKTDIAKLLVDKGVP--LNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGA-NPLAIEKS  290 (1011)
Q Consensus       214 g~t~L~~Aa~~G~~~iv~~Ll~~g~~--~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~  290 (1011)
                      +.+++|.|+..|+++.++.+++.+.+  +|..+.           .|.||||+|+..|+.++|++|++.|+ +++..+..
T Consensus        76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~-----------~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~  144 (276)
T 4hbd_A           76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADS-----------NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRA  144 (276)
T ss_dssp             HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTT
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCC-----------CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCC
Confidence            45778999999999999999887665  666665           89999999999999999999999998 77776665


Q ss_pred             CCCcHHHHHH-----HhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHH
Q psy8109         291 RNRTALHVAA-----IVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLF  365 (1011)
Q Consensus       291 ~g~t~L~~Aa-----~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~  365 (1011)
                       |.|||++|+     ..|+.+++++|++.|.  ..+..+..|.||||+|+..|+.++|++|+++|+++|..|..|.||||
T Consensus       145 -g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~--~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh  221 (276)
T 4hbd_A          145 -GYSPIMLTALATLKTQDDIETVLQLFRLGN--INAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALM  221 (276)
T ss_dssp             -SCCHHHHGGGCCCCSHHHHHHHHHHHHHSC--TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             -CCCHHHHHHHHHhhhhhhHHHHHHHHHcCC--CccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence             999999999     7799999999999998  67888899999999999999999999999999999999999999999


Q ss_pred             HHHHcCChhHHHHHHh-cCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhccC
Q psy8109         366 CAIAQNCLEVFNYLVN-HGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHIN  416 (1011)
Q Consensus       366 ~A~~~g~~~iv~~Ll~-~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~~  416 (1011)
                      +|+..|+.++|++|++ .|++++.. ..|.|||++|+..|+.+++++|+++.+
T Consensus       222 ~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~  274 (276)
T 4hbd_A          222 CACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN  274 (276)
T ss_dssp             HHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred             HHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence            9999999999999999 89999987 788999999999999999999998753

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.94  E-value=1.1e-26  Score=235.11  Aligned_cols=160  Identities=29%  Similarity=0.271  Sum_probs=141.5

Q ss_pred             CCCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q psy8109         210 SHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEK  289 (1011)
Q Consensus       210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~  289 (1011)
                      .+..|+||||+||..|+.+++++|++.|++++..+.           .|.||||.|+..|+.++|++|+++|++++..+.
T Consensus        31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~   99 (192)
T 2rfm_A           31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDI-----------EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF   99 (192)
T ss_dssp             CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccc-----------cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence            467888999999999999999999998888877766           788999999999999999999999988887766


Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q psy8109         290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA  369 (1011)
Q Consensus       290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~  369 (1011)
                      . |.||||+|+..|+.+++++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+.
T Consensus       100 ~-g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~  176 (192)
T 2rfm_A          100 S-GKTPLMWSIIFGYSEMSYFLLEHGA--NVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARI  176 (192)
T ss_dssp             T-SCCHHHHHHHHTCHHHHHHHHHTTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred             C-CCcHHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            5 8899999999999999999999988  788888889999999999999999999999999999888899999999999


Q ss_pred             cCChhHHHHHHhcC
Q psy8109         370 QNCLEVFNYLVNHG  383 (1011)
Q Consensus       370 ~g~~~iv~~Ll~~g  383 (1011)
                      .|+.+++++|+++|
T Consensus       177 ~~~~~~v~~Ll~~~  190 (192)
T 2rfm_A          177 FGRQEVIKIFTEVR  190 (192)
T ss_dssp             TTCHHHHHHHHHHH
T ss_pred             hCcHHHHHHHHhcc
Confidence            99999999988765

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.94  E-value=1.5e-29  Score=262.86  Aligned_cols=200  Identities=17%  Similarity=0.124  Sum_probs=171.6

Q ss_pred             HHHHhCCCCCCccCCC-CCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCC
Q psy8109         702 KMLVKYGADVNLTNEA-CYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD  780 (1011)
Q Consensus       702 ~~Ll~~g~~~~~~~~~-~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad  780 (1011)
                      +.|++.|++++..+.. ..+.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|++.|++
T Consensus         2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~-~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~   79 (229)
T 2vge_A            2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGE-LEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN   79 (229)
T ss_dssp             --------CCCCCCCTTSCHHHHHHHHHHHTC-HHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             eehhccCCCCccccccccchhHHHHHHHHcCC-HHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            4566777766644332 236789999999999 9999999998 999999999999999999999999999999999999


Q ss_pred             CCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHH--HHcCCHHHHHHHHhccCCcccccCCCCCH
Q psy8109         781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTA--AFHNQLDIIKLLLKYNADINAEDKYGKIA  858 (1011)
Q Consensus       781 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~A--a~~g~~~iv~~Ll~~ga~in~~d~~g~ta  858 (1011)
                      ++..|..|.||||+|+..|+.++|++|+++|++++...+..|+||||+|  +..|+.+++++|+++|++++.+|..|.||
T Consensus        80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~  159 (229)
T 2vge_A           80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYA  159 (229)
T ss_dssp             TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEE
T ss_pred             CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHH
Confidence            9999999999999999999999999999999999985557999999999  99999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCC--cccccccCCCHHhhHHhhCCHHHHHH
Q psy8109         859 FHSACQAKNWDIVTFLLDAGSN--IEKATKYRMTFESSKVVEKHVAKLRA  906 (1011)
Q Consensus       859 L~~A~~~g~~~iv~~Ll~~ga~--~~~~~~~g~t~l~~a~~~~~~~~~~~  906 (1011)
                      ++.++..+   .+++|++.|++  ++.+|..|+|||++|++.|+.++++.
T Consensus       160 l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~  206 (229)
T 2vge_A          160 LWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR  206 (229)
T ss_dssp             SSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred             HHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence            99665554   33688899998  67789999999999999999998865

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.94  E-value=1.3e-26  Score=227.45  Aligned_cols=158  Identities=25%  Similarity=0.307  Sum_probs=138.1

Q ss_pred             CcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109         213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN  292 (1011)
Q Consensus       213 ~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g  292 (1011)
                      ...|+|++|+..|+.+++++|++.|++++..+.           .|.||||.|+. |+.++|++|+++|++++..+.. |
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-----------~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~-g   70 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNG-----------FGRTALQVMKL-GNPEIARRLLLRGANPDLKDRT-G   70 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCT-----------TSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTT-S
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCc-----------cCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCC-C
Confidence            356899999999999999999999988887766           78899999988 9999999999999988877666 8


Q ss_pred             CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCC-CccCCCCCCcHHHHHHHcC
Q psy8109         293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD-INSGNDDGCTPLFCAIAQN  371 (1011)
Q Consensus       293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~-~n~~~~~g~t~L~~A~~~g  371 (1011)
                      .||||+|+..|+.+++++|+++|+  +++.++..|.||||+|+..|+.+++++|+++|++ ++..+..|.|||++|+..|
T Consensus        71 ~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~  148 (162)
T 1ihb_A           71 FAVIHDAARAGFLDTLQTLLEFQA--DVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG  148 (162)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence            999999999999999999999988  7888889999999999999999999999999988 5888888999999999999


Q ss_pred             ChhHHHHHHhcCCC
Q psy8109         372 CLEVFNYLVNHGCD  385 (1011)
Q Consensus       372 ~~~iv~~Ll~~g~~  385 (1011)
                      +.+++++|+++|++
T Consensus       149 ~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A          149 RNEVVSLMQANGAG  162 (162)
T ss_dssp             CHHHHHHHHHTC--
T ss_pred             CHHHHHHHHHhCCC
Confidence            99999999998875

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.94  E-value=2.2e-26  Score=227.14  Aligned_cols=159  Identities=28%  Similarity=0.336  Sum_probs=116.7

Q ss_pred             CcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109         213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN  292 (1011)
Q Consensus       213 ~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g  292 (1011)
                      .|.||||+||..|+.+++++|++.|++++..+.           .|.||||.|+..|+.++|++|+++|++++..+.. |
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g   69 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDE-----------EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG-R   69 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-C
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCC-----------CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC-C
Confidence            356777777777777777777777777666655           6777777777777777777777777777666554 7


Q ss_pred             CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC
Q psy8109         293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNC  372 (1011)
Q Consensus       293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~  372 (1011)
                      .||||+|+..|+.+++++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+
T Consensus        70 ~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~  147 (167)
T 3v31_A           70 ESALSLACSKGYTDIVKMLLDCGV--DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY  147 (167)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             CcHHHHHHHcCCHHHHHHHHHCCC--CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence            777777777777777777777776  667777777777777777777777777777777777777777777777777777


Q ss_pred             hhHHHHHHhcCCC
Q psy8109         373 LEVFNYLVNHGCD  385 (1011)
Q Consensus       373 ~~iv~~Ll~~g~~  385 (1011)
                      .+++++|++++.+
T Consensus       148 ~~~~~~L~~~~~~  160 (167)
T 3v31_A          148 RSVQQVIESHLLK  160 (167)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            7777777776544

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.94  E-value=1.5e-26  Score=229.52  Aligned_cols=160  Identities=32%  Similarity=0.367  Sum_probs=115.9

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCC-CCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Q psy8109         215 YKALCWALQEKKTDIAKLLVDKGVP-LNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNR  293 (1011)
Q Consensus       215 ~t~L~~Aa~~G~~~iv~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~  293 (1011)
                      .|+||+||..|+.+++++|++.|.+ ++..+.           .|.||||.|+..|+.++|++|+++|++++..+.. |.
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~   70 (172)
T 3v30_A            3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDE-----------RGFTPLIWASAFGEIETVRFLLEWGADPHILAKE-RE   70 (172)
T ss_dssp             -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-CC
T ss_pred             hhhHHHHHHcCCHHHHHHHHHcCcccccCCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCchhhccc-CC
Confidence            4677777777777777777777655 444443           6777777777777777777777777777666555 77


Q ss_pred             cHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCh
Q psy8109         294 TALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCL  373 (1011)
Q Consensus       294 t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~  373 (1011)
                      ||||+|+..|+.+++++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.
T Consensus        71 t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~  148 (172)
T 3v30_A           71 SALSLASTGGYTDIVGLLLERDV--DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYR  148 (172)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             CHHHHHHHCCCHHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcH
Confidence            77777777777777777777777  6677777777777777777777777777777777777777777777777777777


Q ss_pred             hHHHHHHhcCCCCCC
Q psy8109         374 EVFNYLVNHGCDLSV  388 (1011)
Q Consensus       374 ~iv~~Ll~~g~~~~~  388 (1011)
                      +++++|+++|+++..
T Consensus       149 ~~~~~L~~~~~~~~~  163 (172)
T 3v30_A          149 KVQQVIENHILKLFQ  163 (172)
T ss_dssp             HHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHhc
Confidence            777777777665543

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.94  E-value=8.2e-27  Score=233.07  Aligned_cols=167  Identities=22%  Similarity=0.334  Sum_probs=158.2

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG  799 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g  799 (1011)
                      +.++|+.|+..|+ .+++++|++..+.+++..+..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus         5 ~~~~l~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   83 (179)
T 3f6q_A            5 FMDDIFTQCREGN-AVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG   83 (179)
T ss_dssp             --CCHHHHHHHTC-HHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             HHHHHHHHHHcCC-HHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            7799999999999 999999999988899999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109         800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS  879 (1011)
Q Consensus       800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga  879 (1011)
                      +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|+
T Consensus        84 ~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~  162 (179)
T 3f6q_A           84 HRDIVQKLLQYKADINA-VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ  162 (179)
T ss_dssp             CHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999998 78899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccccC
Q psy8109         880 NIEKATKYR  888 (1011)
Q Consensus       880 ~~~~~~~~g  888 (1011)
                      +++..+..+
T Consensus       163 ~~~~~~~~~  171 (179)
T 3f6q_A          163 NLNRIPYKD  171 (179)
T ss_dssp             CCSCBCCCC
T ss_pred             CcccCCccc
Confidence            998766443

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.94  E-value=1.8e-26  Score=224.00  Aligned_cols=151  Identities=25%  Similarity=0.296  Sum_probs=122.4

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCC
Q psy8109         755 NRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQ  834 (1011)
Q Consensus       755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~  834 (1011)
                      ..|+|+.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~   79 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEGH   79 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTC
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCh
Confidence            3567888888888888888888887765 466778888888888888888888888888776 66778888888888888


Q ss_pred             HHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109         835 LDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA  907 (1011)
Q Consensus       835 ~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  907 (1011)
                      .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||+++|+..|+.++++.+
T Consensus        80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            8888888888888888888888888888888888888888888888888888888888888888888877654

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.93  E-value=1.2e-25  Score=218.21  Aligned_cols=151  Identities=28%  Similarity=0.363  Sum_probs=111.3

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Q psy8109         214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNR  293 (1011)
Q Consensus       214 g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~  293 (1011)
                      ..++|+.|+..|+.+++++|++.|++++. +.           .|.||||.|+..|+.++|++|++.|++++..+.. |.
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~   68 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMANGAPFTT-DW-----------LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV-DR   68 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTCCCCC-CT-----------TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT-CC
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHcCCCCCc-CC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CC
Confidence            34677777777777777777777776542 22           5677777777777777777777777777666555 77


Q ss_pred             cHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCh
Q psy8109         294 TALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCL  373 (1011)
Q Consensus       294 t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~  373 (1011)
                      ||||+|+..|+.+++++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.
T Consensus        69 t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~  146 (153)
T 1awc_B           69 TPLHMAASEGHANIVEVLLKHGA--DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE  146 (153)
T ss_dssp             CHHHHHHHHTCHHHHHHHHTTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             CHHHHHHHcChHHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence            77777777777777777777777  6677777777777777777777777777777777777777777777777777777


Q ss_pred             hHHHHH
Q psy8109         374 EVFNYL  379 (1011)
Q Consensus       374 ~iv~~L  379 (1011)
                      +++++|
T Consensus       147 ~i~~~L  152 (153)
T 1awc_B          147 DLAEIL  152 (153)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            777765

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.93  E-value=2.1e-26  Score=226.85  Aligned_cols=157  Identities=27%  Similarity=0.310  Sum_probs=130.1

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG  799 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g  799 (1011)
                      +.|||+.|+..|+ .+++++|++..+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus         8 ~~~~l~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   86 (165)
T 3twr_A            8 ADRQLLEAAKAGD-VETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYG   86 (165)
T ss_dssp             HHHHHHHHHHHTC-HHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             hhHHHHHHHHhCC-HHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcC
Confidence            6788888888888 888888888667777777888888888888888888888888888888888888888888888888


Q ss_pred             hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109         800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS  879 (1011)
Q Consensus       800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga  879 (1011)
                      +.+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+. |+.+++++|+++||
T Consensus        87 ~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA  164 (165)
T 3twr_A           87 HYEVAELLVKHGAVVNV-ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA  164 (165)
T ss_dssp             CHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred             cHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence            88888888888888886 67788888888888888888888888888888888888888888766 78888888888775

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.93  E-value=3.3e-28  Score=252.83  Aligned_cols=197  Identities=18%  Similarity=0.129  Sum_probs=157.1

Q ss_pred             HHHHHCCCCCcCCCC----CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhc
Q psy8109         669 EILLEANADVNLGDG----TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEEC  744 (1011)
Q Consensus       669 ~~Ll~~ga~~~~~~~----~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~  744 (1011)
                      +.|+++|++++..+.    +.|||+.|+. .|+.+++++|++.|++++..+..  |.||||+|+..|+ .+++++|++. 
T Consensus         2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~~d~~--g~tpLh~A~~~g~-~~~v~~Ll~~-   76 (229)
T 2vge_A            2 RSVLRKAGSPRKARRARLNPLVLLLDAAL-TGELEVVQQAVKEMNDPSQPNEE--GITALHNAICGAN-YSIVDFLITA-   76 (229)
T ss_dssp             --------CCCCCCCTTSCHHHHHHHHHH-HTCHHHHHHHHHHSSCTTCCCTT--SCCHHHHHHHTTC-HHHHHHHHHT-
T ss_pred             eehhccCCCCccccccccchhHHHHHHHH-cCCHHHHHHHHhcCCCCCCCCCC--CCCHHHHHHHcCC-HHHHHHHHHC-
Confidence            344455554443322    3344555555 55556666666666666655555  8999999999999 9999999998 


Q ss_pred             CCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCC-cCCCCccccc--ccCChHHHHHHHHHcCCCccccccCC
Q psy8109         745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD-LKDTSPLLSS--CRQGLYEIVDTLLEYNADTNLRTIKH  821 (1011)
Q Consensus       745 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~A--~~~g~~~iv~~Ll~~g~~~~~~~~~~  821 (1011)
                      |++++..|..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|  +..|+.+++++|+++|++++. .+..
T Consensus        77 ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~-~~~~  155 (229)
T 2vge_A           77 GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL-MNSG  155 (229)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT-SGGG
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc-ccCC
Confidence            99999999999999999999999999999999999999987 6999999999  999999999999999999998 6788


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCC--cccccCCCCCHHHHHHHcCCHHHHHHH
Q psy8109         822 GSTALHTAAFHNQLDIIKLLLKYNAD--INAEDKYGKIAFHSACQAKNWDIVTFL  874 (1011)
Q Consensus       822 g~t~L~~Aa~~g~~~iv~~Ll~~ga~--in~~d~~g~taL~~A~~~g~~~iv~~L  874 (1011)
                      |.||++.++..+   .+++|++.|++  ++.+|..|+||||+|+..|+.++|+.+
T Consensus       156 ~~~~l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~  207 (229)
T 2vge_A          156 AVYALWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN  207 (229)
T ss_dssp             EEEESSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred             chHHHHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence            899998765544   34688899998  778899999999999999999988753

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.93  E-value=1.1e-25  Score=219.45  Aligned_cols=152  Identities=26%  Similarity=0.312  Sum_probs=99.0

Q ss_pred             CcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCCh
Q psy8109         721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGL  800 (1011)
Q Consensus       721 ~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~  800 (1011)
                      .|||+.|+..|+ .+++++|++..+.+++..+..|.||||+ +..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus         3 ~~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   80 (156)
T 1bd8_A            3 GDRLSGAAARGD-VQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHHTC-HHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             chHHHHHHHhCC-HHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence            456666666666 6666666665445666666666666666 66666666666666666666666666666666666666


Q ss_pred             HHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHh
Q psy8109         801 YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD  876 (1011)
Q Consensus       801 ~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~  876 (1011)
                      .+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++ ++++.+|..|.|||++|+..|+.+++++|++
T Consensus        81 ~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  154 (156)
T 1bd8_A           81 LDTLKVLVEHGADVNV-PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG  154 (156)
T ss_dssp             HHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence            6666666666666665 555666666666666666666666666 6666666666666666666666666666665

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.93  E-value=1.5e-25  Score=223.85  Aligned_cols=164  Identities=26%  Similarity=0.272  Sum_probs=143.4

Q ss_pred             CCcchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q psy8109         212 SQGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKS  290 (1011)
Q Consensus       212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~  290 (1011)
                      +.+.++|+.||..|+.++|++|++. +.+++..+.           .|.||||.|+..|+.++|++|++.|++++..+..
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~   71 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDD-----------HGFSPLHWACREGRSAVVEMLIMRGARINVMNRG   71 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCC-----------CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC
Confidence            4567889999999999999999987 556666665           7889999999999999999999999998887766


Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy8109         291 RNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ  370 (1011)
Q Consensus       291 ~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~  370 (1011)
                       |.||||+|+..|+.++|++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..
T Consensus        72 -g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~  148 (179)
T 3f6q_A           72 -DDTPLHLAASHGHRDIVQKLLQYKA--DINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAP  148 (179)
T ss_dssp             -CCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHH
T ss_pred             -CCCHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHH
Confidence             8999999999999999999999988  7888899999999999999999999999999999999999999999999999


Q ss_pred             CChhHHHHHHhcCCCCCCC
Q psy8109         371 NCLEVFNYLVNHGCDLSVP  389 (1011)
Q Consensus       371 g~~~iv~~Ll~~g~~~~~~  389 (1011)
                      ++.+++++|+++|++++..
T Consensus       149 ~~~~~~~~L~~~g~~~~~~  167 (179)
T 3f6q_A          149 LRELLRERAEKMGQNLNRI  167 (179)
T ss_dssp             HHHHHHHHHHHTTCCCSCB
T ss_pred             HHHHHHHHHHHhhcCcccC
Confidence            9999999999999988765

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.93  E-value=1.2e-25  Score=221.41  Aligned_cols=159  Identities=30%  Similarity=0.370  Sum_probs=129.3

Q ss_pred             CCCcchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q psy8109         211 HSQGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEK  289 (1011)
Q Consensus       211 ~~~g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~  289 (1011)
                      ++.|.|+|+.|+..|+.+++++|++. +.+++..+.           .|.||||.|+..|+.++|++|+++|++++..+.
T Consensus         5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~   73 (165)
T 3twr_A            5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEG-----------RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK   73 (165)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTT-----------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccccc-----------CCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC
Confidence            56778888888888888888888874 334443333           677888888888888888888888888877776


Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q psy8109         290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA  369 (1011)
Q Consensus       290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~  369 (1011)
                      . |.||||+|+..|+.+++++|+++|+  +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+.
T Consensus        74 ~-g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~  150 (165)
T 3twr_A           74 G-GLVPLHNACSYGHYEVAELLVKHGA--VVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD  150 (165)
T ss_dssp             T-SCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT
T ss_pred             C-CCCHHHHHHHcCcHHHHHHHHhCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc
Confidence            5 8888888888888888888888888  678888888888888888888888888888888888888888888888766


Q ss_pred             cCChhHHHHHHhcCC
Q psy8109         370 QNCLEVFNYLVNHGC  384 (1011)
Q Consensus       370 ~g~~~iv~~Ll~~g~  384 (1011)
                       |+.+++++|+++|+
T Consensus       151 -~~~~i~~~L~~~gA  164 (165)
T 3twr_A          151 -GDTDIQDLLRGDAA  164 (165)
T ss_dssp             -TCHHHHHHHHTC--
T ss_pred             -CChHHHHHHhhccc
Confidence             88888888888775

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.92  E-value=8.8e-25  Score=212.91  Aligned_cols=153  Identities=24%  Similarity=0.355  Sum_probs=114.8

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109         214 GYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN  292 (1011)
Q Consensus       214 g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g  292 (1011)
                      |.|+|++|+..|+.+++++|++. +.+++..+.           .|.||||. +..|+.++|++|+++|++++..+.. |
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~-g   68 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNR-----------FGKTALQV-MMFGSTAIALELLKQGASPNVQDTS-G   68 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCT-----------TSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTT-S
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCC-----------CCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCC-C
Confidence            45777888888888888877776 335555554           67777777 7777777777777777777766655 7


Q ss_pred             CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC
Q psy8109         293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNC  372 (1011)
Q Consensus       293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~  372 (1011)
                      .||||+|+..|+.+++++|+++|+  +++.++..|.||||+|+..|+.+++++|+++ ++++..+..|.|||++|+..|+
T Consensus        69 ~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~  145 (156)
T 1bd8_A           69 TSPVHDAARTGFLDTLKVLVEHGA--DVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGA  145 (156)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCC
T ss_pred             CCHHHHHHHcCcHHHHHHHHHcCC--CCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCc
Confidence            777777777777777777777777  6777777777777777777777777777777 7777777777777777777777


Q ss_pred             hhHHHHHHhc
Q psy8109         373 LEVFNYLVNH  382 (1011)
Q Consensus       373 ~~iv~~Ll~~  382 (1011)
                      .+++++|+++
T Consensus       146 ~~~v~~Ll~~  155 (156)
T 1bd8_A          146 QDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHhh
Confidence            7777777764

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.92  E-value=4.7e-25  Score=209.10  Aligned_cols=134  Identities=24%  Similarity=0.317  Sum_probs=129.9

Q ss_pred             CCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCC-CC
Q psy8109         745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH-GS  823 (1011)
Q Consensus       745 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~-g~  823 (1011)
                      +++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+. |+.+++++|+++|++++. .+.. |.
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~~g~   79 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC-ADPATLT   79 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC-CBTTTTB
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC-cCCCCCC
Confidence            57889999999999999999999999999999999999999999999999999 999999999999999998 6777 99


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109         824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN  880 (1011)
Q Consensus       824 t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~  880 (1011)
                      ||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999999986

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.92  E-value=1.6e-26  Score=242.60  Aligned_cols=177  Identities=16%  Similarity=0.129  Sum_probs=135.3

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109         720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG  799 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g  799 (1011)
                      |.||||.|+..++ .++++.|+++ |++++.. ..|.||||.|+..|+.++|++|++.|++++..|..|.||||+|+..|
T Consensus         5 g~t~L~~a~~~~~-~~~~~~ll~~-g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g   81 (239)
T 1ycs_B            5 GQVSLPPGKRTNL-RKTGSERIAH-GMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG   81 (239)
T ss_dssp             -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred             ccccCchhhhhhh-HHHHHHHhcc-CCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            8999999999999 9999999998 9999864 67899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC-CHHHHH--HHcCCHHHHHHHHh
Q psy8109         800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK-IAFHSA--CQAKNWDIVTFLLD  876 (1011)
Q Consensus       800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~-taL~~A--~~~g~~~iv~~Ll~  876 (1011)
                      +.++|++|+++|++++. .+..|+||||+|+..|+.++|++|+++|++++.++..|. ||||+|  +..|+.+++++|++
T Consensus        82 ~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~  160 (239)
T 1ycs_B           82 HTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG  160 (239)
T ss_dssp             CHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence            99999999999999998 788999999999999999999999999999999998877 999999  78899999999999


Q ss_pred             cCCCcccc---------cccCCCHHhhHHhhCC
Q psy8109         877 AGSNIEKA---------TKYRMTFESSKVVEKH  900 (1011)
Q Consensus       877 ~ga~~~~~---------~~~g~t~l~~a~~~~~  900 (1011)
                      +|++++..         +..+.++++++...|.
T Consensus       161 ~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~  193 (239)
T 1ycs_B          161 VQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD  193 (239)
T ss_dssp             HHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred             hhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence            99998876         4557788888777765

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.92  E-value=8.5e-26  Score=237.08  Aligned_cols=178  Identities=19%  Similarity=0.242  Sum_probs=128.3

Q ss_pred             CCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q psy8109         212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR  291 (1011)
Q Consensus       212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~  291 (1011)
                      ..|.|||+.|+..|+.++++.|+++|++++...            .+.||||.|+..|+.++|++|++.|++++..+.. 
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~------------~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~-   69 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNP------------LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE-   69 (239)
T ss_dssp             ----------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTT-
T ss_pred             ccccccCchhhhhhhHHHHHHHhccCCCcccCc------------hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-
Confidence            468899999999999999999999999987542            5789999999999999999999999998888766 


Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCC-cHHHHH--H
Q psy8109         292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGC-TPLFCA--I  368 (1011)
Q Consensus       292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~-t~L~~A--~  368 (1011)
                      |.||||+|+..|+.++|++|+++|+  +++.+|..|+||||+|+..|+.++|++|+++|++++..+..|. |||++|  +
T Consensus        70 g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~  147 (239)
T 1ycs_B           70 GITALHNAVCAGHTEIVKFLVQFGV--NVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEM  147 (239)
T ss_dssp             SCCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSS
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHh
Confidence            9999999999999999999999998  7899999999999999999999999999999999999988777 999999  7


Q ss_pred             HcCChhHHHHHHhcCCCCCCC----------CCCCcHHHHHHhcCC
Q psy8109         369 AQNCLEVFNYLVNHGCDLSVP----------EGERTALHMASQFGN  404 (1011)
Q Consensus       369 ~~g~~~iv~~Ll~~g~~~~~~----------~~~~t~L~~Aa~~g~  404 (1011)
                      ..|+.+++++|+++|++++..          ..+.++++++...|.
T Consensus       148 ~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~  193 (239)
T 1ycs_B          148 EEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD  193 (239)
T ss_dssp             STTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred             hhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence            889999999999999887753          234566777766665

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.92  E-value=5.6e-25  Score=214.09  Aligned_cols=145  Identities=21%  Similarity=0.248  Sum_probs=120.9

Q ss_pred             ccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCCh-HHH
Q psy8109         749 TLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGST-ALH  827 (1011)
Q Consensus       749 ~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t-~L~  827 (1011)
                      +..+..|.||||.|+..|+.++|++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++. .+..|.| |||
T Consensus         6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~-~d~~g~ttpL~   83 (156)
T 1bi7_B            6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC-ADPATLTRPVH   83 (156)
T ss_dssp             ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-CCTTTCCCHHH
T ss_pred             cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-cCCCCCcHHHH
Confidence            345678999999999999999999999999999999999999999986 9999999999999999998 7888998 999


Q ss_pred             HHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhH
Q psy8109         828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSK  895 (1011)
Q Consensus       828 ~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a  895 (1011)
                      +|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||.+.+
T Consensus        84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~  151 (156)
T 1bi7_B           84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP  151 (156)
T ss_dssp             HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred             HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999987643

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.90  E-value=1.6e-24  Score=216.46  Aligned_cols=153  Identities=18%  Similarity=0.126  Sum_probs=88.2

Q ss_pred             CcHHHHHHHCCCHHHHHHHHHHhcCCCccccc-CCCccHHHHHHhCCCH----HHHHHHHHCCCCCCCCCcCCCCccccc
Q psy8109         721 MTPLHYASYRGDCNDIARFLVEECNADITLRN-FNNRTALNFAAFGNNL----DLLKFLLKAGADPDILDLKDTSPLLSS  795 (1011)
Q Consensus       721 ~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~-~~g~t~L~~Aa~~g~~----~iv~~Ll~~gad~~~~d~~g~t~L~~A  795 (1011)
                      .++++.|+..|+ .+.++.++.. +  ++..+ ..|+||||+|+..|+.    +++++|+++|+++|.++..|+||||+|
T Consensus         7 ~~~l~~Aa~~g~-~~~~~~l~~~-~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a   82 (186)
T 3t8k_A            7 YRTVSAAAMLGT-YEDFLELFEK-G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL   82 (186)
T ss_dssp             CSSHHHHHHHSC-HHHHHHHHHH-S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred             ccHHHHHHHcCC-HHHHHHHHhc-C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence            355666666666 4455555444 2  22333 4466666666666653    356666666666666666666666666


Q ss_pred             ccCCh------HHHHHHHHHcCCCccccccCCCC-hHHHHHHHcC-----CHHHHHHHHh-ccCCcccccCCCCCHHHHH
Q psy8109         796 CRQGL------YEIVDTLLEYNADTNLRTIKHGS-TALHTAAFHN-----QLDIIKLLLK-YNADINAEDKYGKIAFHSA  862 (1011)
Q Consensus       796 ~~~g~------~~iv~~Ll~~g~~~~~~~~~~g~-t~L~~Aa~~g-----~~~iv~~Ll~-~ga~in~~d~~g~taL~~A  862 (1011)
                      +..|+      .++|++|+++|+++|. .+..|. ||||+|+..+     +.+++++|++ +|++++.+|..|+||||+|
T Consensus        83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~-~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A  161 (186)
T 3t8k_A           83 FQGGGNDITGTTELCKIFLEKGADITA-LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV  161 (186)
T ss_dssp             HHHCTTCHHHHHHHHHHHHHTTCCSSS-CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred             HHcCCcchhhHHHHHHHHHHCCCCCCc-cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence            65553      4556666666666665 455555 6666665532     2345666665 5666666666666666666


Q ss_pred             HHcCCHHHHHHHHhcC
Q psy8109         863 CQAKNWDIVTFLLDAG  878 (1011)
Q Consensus       863 ~~~g~~~iv~~Ll~~g  878 (1011)
                      ++.|+.++|++|++..
T Consensus       162 ~~~~~~~~v~~L~~~~  177 (186)
T 3t8k_A          162 KRCQKPIALKMMEDYI  177 (186)
T ss_dssp             HTTTCHHHHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHHH
Confidence            6666666666666543

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.90  E-value=1.8e-23  Score=198.06  Aligned_cols=125  Identities=29%  Similarity=0.382  Sum_probs=117.0

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCC-CCCHHHHHH
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVA-GLTPLHIAC  335 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~-g~t~L~~Aa  335 (1011)
                      .|.||||.|+..|+.++|++|+++|++++..+.. |.||||+|+. |+.+++++|+++|+  +++.++.. |.||||+|+
T Consensus        11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~--~~~~~~~~~g~t~L~~A~   86 (136)
T 1d9s_A           11 SSDAGLATAAARGQVETVRQLLEAGADPNALNRF-GRRPIQVMMM-GSAQVAELLLLHGA--EPNCADPATLTRPVHDAA   86 (136)
T ss_dssp             CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCTTTTTSTT-SCHHHHHHHHHHTC--CSSCCBTTTTBCHHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCC-CCCHHHHHHc-CCHHHHHHHHHCCC--CCCCcCCCCCCCHHHHHH
Confidence            8899999999999999999999999999887766 9999999999 99999999999998  78889999 999999999


Q ss_pred             hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCC
Q psy8109         336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD  385 (1011)
Q Consensus       336 ~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  385 (1011)
                      ..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++
T Consensus        87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           87 REGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             HHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999875

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.89  E-value=2.9e-24  Score=214.48  Aligned_cols=153  Identities=18%  Similarity=0.148  Sum_probs=139.0

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHCCCCCCCCC-cCCCCcccccccCChH----HHHHHHHHcCCCccccccCCCChHHHHH
Q psy8109         755 NRTALNFAAFGNNLDLLKFLLKAGADPDILD-LKDTSPLLSSCRQGLY----EIVDTLLEYNADTNLRTIKHGSTALHTA  829 (1011)
Q Consensus       755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~g~t~L~~A  829 (1011)
                      +.++|+.|+..|+.+.++.++..+.  +..+ ..|+||||+|+..|+.    +++++|+++|+++|. .+..|+||||+|
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpLh~a   82 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS-RTKEGTTLFFPL   82 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-CCTTCCCTHHHH
T ss_pred             cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-CCCCCCcHHHHH
Confidence            4678999999999999999998774  4455 7799999999999964    599999999999998 779999999999


Q ss_pred             HHcCC------HHHHHHHHhccCCcccccCCCC-CHHHHHHHcC-----CHHHHHHHHh-cCCCcccccccCCCHHhhHH
Q psy8109         830 AFHNQ------LDIIKLLLKYNADINAEDKYGK-IAFHSACQAK-----NWDIVTFLLD-AGSNIEKATKYRMTFESSKV  896 (1011)
Q Consensus       830 a~~g~------~~iv~~Ll~~ga~in~~d~~g~-taL~~A~~~g-----~~~iv~~Ll~-~ga~~~~~~~~g~t~l~~a~  896 (1011)
                      +..|+      .++|++|+++|+++|.+|..|+ ||||+|+..+     +.+++++|++ +|++++.+|..|.||||+|+
T Consensus        83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~  162 (186)
T 3t8k_A           83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK  162 (186)
T ss_dssp             HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred             HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHH
Confidence            99987      6889999999999999999999 9999999954     4679999999 99999999999999999999


Q ss_pred             hhCCHHHHHHhhhc
Q psy8109         897 VEKHVAKLRAANIY  910 (1011)
Q Consensus       897 ~~~~~~~~~~~~~~  910 (1011)
                      ..|+.++++.+.-|
T Consensus       163 ~~~~~~~v~~L~~~  176 (186)
T 3t8k_A          163 RCQKPIALKMMEDY  176 (186)
T ss_dssp             TTTCHHHHHHHHHH
T ss_pred             HcCCHHHHHHHHHH
Confidence            99999999887544

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.89  E-value=3.3e-23  Score=201.55  Aligned_cols=140  Identities=19%  Similarity=0.229  Sum_probs=82.4

Q ss_pred             CCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q psy8109         211 HSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKS  290 (1011)
Q Consensus       211 ~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~  290 (1011)
                      +..|.|+||+|+..|+.++|++|++.|++++..+.           .|.||||+|+ .|+.++|++|+++|++++..+..
T Consensus         9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~   76 (156)
T 1bi7_B            9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNS-----------YGRRPIQVMM-MGSARVAELLLLHGAEPNCADPA   76 (156)
T ss_dssp             -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS-----------SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTT
T ss_pred             CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-----------CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCC
Confidence            45566677777777777777777766666665554           5666666664 66666666666666666655554


Q ss_pred             CCCc-HHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHH
Q psy8109         291 RNRT-ALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLF  365 (1011)
Q Consensus       291 ~g~t-~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~  365 (1011)
                       |.| |||+|+..|+.++|++|+++|+  +++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||.+
T Consensus        77 -g~ttpL~~A~~~~~~~~v~~Ll~~ga--~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~  149 (156)
T 1bi7_B           77 -TLTRPVHDAAREGFLDTLVVLHRAGA--RLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE  149 (156)
T ss_dssp             -TCCCHHHHHHHHTCHHHHHHHHHHTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred             -CCcHHHHHHHHCCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence             665 6666666666666666666666  56666666666666666666666666666666666666666666554

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.88  E-value=8.8e-23  Score=190.57  Aligned_cols=126  Identities=42%  Similarity=0.628  Sum_probs=118.2

Q ss_pred             CCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcC
Q psy8109         754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHN  833 (1011)
Q Consensus       754 ~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g  833 (1011)
                      +|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~   79 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNG   79 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcC
Confidence            478999999999999999999999999999999999999999999999999999999999987 7788999999999999


Q ss_pred             CHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109         834 QLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN  880 (1011)
Q Consensus       834 ~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~  880 (1011)
                      +.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|||
T Consensus        80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999986

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.88  E-value=8.1e-23  Score=193.63  Aligned_cols=126  Identities=36%  Similarity=0.430  Sum_probs=116.9

Q ss_pred             cCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHH
Q psy8109         752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAF  831 (1011)
Q Consensus       752 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~  831 (1011)
                      ...+.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+.
T Consensus        11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~   89 (136)
T 2jab_A           11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA-VDAIGFTPLHLAAF   89 (136)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHH
T ss_pred             cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHH
Confidence            34578999999999999999999999999999999999999999999999999999999999987 77899999999999


Q ss_pred             cCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109         832 HNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG  878 (1011)
Q Consensus       832 ~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g  878 (1011)
                      .|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus        90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999999886

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.87  E-value=1.2e-21  Score=182.82  Aligned_cols=126  Identities=46%  Similarity=0.676  Sum_probs=115.9

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR  336 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~  336 (1011)
                      .|.||||.|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|+  +++..+..|.||||+|+.
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~--~~~~~~~~g~t~l~~A~~   77 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAAR   77 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHH
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCcHHHHHHHHHcCC--CCcccCCCCCcHHHHHHH
Confidence            3779999999999999999999999998877666 9999999999999999999999998  788889999999999999


Q ss_pred             cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCC
Q psy8109         337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD  385 (1011)
Q Consensus       337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  385 (1011)
                      .|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++
T Consensus        78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999999875

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.87  E-value=7.4e-22  Score=186.97  Aligned_cols=124  Identities=29%  Similarity=0.392  Sum_probs=111.7

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR  336 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~  336 (1011)
                      .+.||||.|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|+  +++..|..|.||||+|+.
T Consensus        13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~   89 (136)
T 2jab_A           13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEY-GLTPLYLATAHGHLEIVEVLLKNGA--DVNAVDAIGFTPLHLAAF   89 (136)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHH
T ss_pred             cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCC--CCCcCCCCCCCHHHHHHH
Confidence            5678999999999999999999999998877665 8999999999999999999999988  788889999999999999


Q ss_pred             cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcC
Q psy8109         337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG  383 (1011)
Q Consensus       337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g  383 (1011)
                      .|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|
T Consensus        90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999998876

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.86  E-value=8.1e-23  Score=193.96  Aligned_cols=121  Identities=24%  Similarity=0.282  Sum_probs=63.3

Q ss_pred             CCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHH
Q psy8109         784 LDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSAC  863 (1011)
Q Consensus       784 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~  863 (1011)
                      ++..|.||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus         6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~   84 (137)
T 3c5r_A            6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA   84 (137)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence            344444444444444444444444444444443 3444555555555555555555555555555555555555555555


Q ss_pred             HcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHH
Q psy8109         864 QAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLR  905 (1011)
Q Consensus       864 ~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~  905 (1011)
                      ..|+.+++++|+++|++++..|..|.||+++|+..+..++++
T Consensus        85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~  126 (137)
T 3c5r_A           85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL  126 (137)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHS
T ss_pred             HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHh
Confidence            555555555555555555555555555555555555544443

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.86  E-value=2.9e-22  Score=190.17  Aligned_cols=134  Identities=28%  Similarity=0.419  Sum_probs=121.6

Q ss_pred             CCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCCh
Q psy8109         745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGST  824 (1011)
Q Consensus       745 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t  824 (1011)
                      |+|+ .++..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.|
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t   78 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT-TGYQNDS   78 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCGGGCC
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-cCCCCCC
Confidence            5666 6889999999999999999999999999999999999999999999999999999999999999997 7889999


Q ss_pred             HHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109         825 ALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN  880 (1011)
Q Consensus       825 ~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~  880 (1011)
                      |||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|.+++..
T Consensus        79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s  134 (137)
T 3c5r_A           79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS  134 (137)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence            99999999999999999999999999999999999999999999999998877654

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.84  E-value=2.5e-21  Score=209.43  Aligned_cols=140  Identities=21%  Similarity=0.131  Sum_probs=118.7

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHCCCCCCC------CCcCCCCcccccccC---ChHHHHHHHHHcCCCccccccCCCChH
Q psy8109         755 NRTALNFAAFGNNLDLLKFLLKAGADPDI------LDLKDTSPLLSSCRQ---GLYEIVDTLLEYNADTNLRTIKHGSTA  825 (1011)
Q Consensus       755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~------~d~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~g~t~  825 (1011)
                      ..++|+.|+..|+.+.++.|++.|++++.      .+..|.||||+|+..   |+.++|++|+++|++++. .+..|.||
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~-~d~~G~Tp  229 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNTA  229 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC-CCTTCCCH
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC-CCCCCCCH
Confidence            45678899999999999999999988887      578889999999886   889999999999999987 77889999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCH
Q psy8109         826 LHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHV  901 (1011)
Q Consensus       826 L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~  901 (1011)
                      ||+|+..|+.++|++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++      .|.||||+|+..|+.
T Consensus       230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence            9999999999999999999999999999999999999999999999999998876      578999999988864

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.83  E-value=2.7e-21  Score=179.50  Aligned_cols=111  Identities=26%  Similarity=0.259  Sum_probs=65.6

Q ss_pred             CCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCC
Q psy8109         788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN  867 (1011)
Q Consensus       788 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~  867 (1011)
                      |.||||+|+..|+.+++++|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus         7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~   85 (123)
T 3aaa_C            7 CDKEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH   85 (123)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCTTS-CCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCcCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence            34444444444444444444444444443 44456666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHHHhcCCCcccccccCCCHHhhHHhhC
Q psy8109         868 WDIVTFLLDAGSNIEKATKYRMTFESSKVVEK  899 (1011)
Q Consensus       868 ~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  899 (1011)
                      .+++++|+++|++++..|..|.||+++|...+
T Consensus        86 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~  117 (123)
T 3aaa_C           86 VSCVKLLLSKGADKTVKGPDGLTAFEATDNQA  117 (123)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence            66666666666666666666666666664433

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.83  E-value=1.1e-21  Score=203.44  Aligned_cols=137  Identities=26%  Similarity=0.268  Sum_probs=115.2

Q ss_pred             ccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHc-CCCccccccCCCChHHHHH
Q psy8109         751 RNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEY-NADTNLRTIKHGSTALHTA  829 (1011)
Q Consensus       751 ~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~g~t~L~~A  829 (1011)
                      .+..|.||||.|+..|+.++|++|++.|++++..+..|.||||+|+..|+.++|++|+++ |++++. .+..|+||||+|
T Consensus        69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-~d~~g~tpL~~A  147 (222)
T 3ehr_A           69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ-QNKLGDTALHAA  147 (222)
T ss_dssp             HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC-CCTTSCCHHHHH
T ss_pred             cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc-cCCCCCCHHHHH
Confidence            356789999999999999999999999999999999999999999999999999999998 999997 788999999999


Q ss_pred             HHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccC
Q psy8109         830 AFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYR  888 (1011)
Q Consensus       830 a~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g  888 (1011)
                      +..|+.++|++|+++|++++.+|..|+|||++|+..|+.++++.|++.|+.....+..+
T Consensus       148 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          148 AWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED  206 (222)
T ss_dssp             HHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred             HHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence            99999999999999999999999999999999999999999999999999887766544

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.83  E-value=1e-20  Score=189.31  Aligned_cols=140  Identities=24%  Similarity=0.202  Sum_probs=98.6

Q ss_pred             CCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q psy8109         212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR  291 (1011)
Q Consensus       212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~  291 (1011)
                      ..|.||||+|+..|+.+++++|++ |++++..+.           .|.||||+|+..|+.++|++|+++|++++..++..
T Consensus        42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-----------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~  109 (183)
T 3deo_A           42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDE-----------NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG  109 (183)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCT-----------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC
Confidence            356678888888888888888877 777776665           67777777777777777777777777776666444


Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109         292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN  371 (1011)
Q Consensus       292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g  371 (1011)
                      |+||||+|+..|+.+++++|+++|+  +++.+|..|.||||+|+..++.                 ..+.++|++|+..|
T Consensus       110 g~tpL~~A~~~~~~~~v~~Ll~~ga--~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~  170 (183)
T 3deo_A          110 GLTALHMAAGYVRPEVVEALVELGA--DIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIG  170 (183)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHHHTC--CTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHH
T ss_pred             CCCHHHHHHhcCcHHHHHHHHHcCC--CCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcC
Confidence            7777777777777777777777776  5666777777777777664322                 23456677777777


Q ss_pred             ChhHHHHHHhc
Q psy8109         372 CLEVFNYLVNH  382 (1011)
Q Consensus       372 ~~~iv~~Ll~~  382 (1011)
                      +.+++++|.++
T Consensus       171 ~~~i~~~L~~~  181 (183)
T 3deo_A          171 LEKVINVLEGQ  181 (183)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHHHh
Confidence            77776666554

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.83  E-value=1.2e-20  Score=188.68  Aligned_cols=138  Identities=29%  Similarity=0.355  Sum_probs=127.5

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccC-CCCCCHHHHHH
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQN-VAGLTPLHIAC  335 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~t~L~~Aa  335 (1011)
                      .|.||||.|+..|+.++|++|++ |++++..+.. |+||||+|+..|+.++|++|+++|+  +++..+ ..|+||||+|+
T Consensus        43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga--~~~~~~~~~g~tpL~~A~  118 (183)
T 3deo_A           43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGA--DLDHRDMRGGLTALHMAA  118 (183)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCSSSSCCHHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCC--CCCcCCCCCCCCHHHHHH
Confidence            67899999999999999999999 9999887776 9999999999999999999999999  788888 88999999999


Q ss_pred             hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy8109         336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH  414 (1011)
Q Consensus       336 ~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~  414 (1011)
                      ..|+.+++++|+++|++++..+..|.|||++|+..++.                ....++|++|+..|+.+++++|.++
T Consensus       119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~----------------~~~~~~l~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred             hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence            99999999999999999999999999999999986544                2236899999999999999999765

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.83  E-value=3.9e-20  Score=200.04  Aligned_cols=141  Identities=23%  Similarity=0.221  Sum_probs=120.3

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCCccc-----ccCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCCcccCCCCCC
Q psy8109         258 TDTPLHSAILNSDIELVKLLLEKGANPLAI-----EKSRNRTALHVAAIV---ESVDIVKLLFDYGAEKSVNVQNVAGLT  329 (1011)
Q Consensus       258 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----~~~~g~t~L~~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~~g~t  329 (1011)
                      ..++|+.|+..|+++.|+.|++.|++++..     .+..|.||||+|+..   |+.++|++|+++|+  +++.+|..|.|
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga--dvn~~d~~G~T  228 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG--HLDAKAADGNT  228 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS--CTTCCCTTCCC
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC--CCCCCCCCCCC
Confidence            457799999999999999999999998763     344489999999997   89999999999998  78999999999


Q ss_pred             HHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCH
Q psy8109         330 PLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNL  405 (1011)
Q Consensus       330 ~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~  405 (1011)
                      |||+|+..|+.++|++|+++|++++..|..|.|||++|+..|+.+++++|+++|++     .+.||||+|+..|+.
T Consensus       229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TTSSCCC--------
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCCc
Confidence            99999999999999999999999999999999999999999999999999999886     357999999988864

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.83  E-value=1.7e-20  Score=197.04  Aligned_cols=138  Identities=29%  Similarity=0.355  Sum_probs=127.6

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccC-CCCCCHHHHHH
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQN-VAGLTPLHIAC  335 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~t~L~~Aa  335 (1011)
                      .|.||||.|+..|+.++|++|++ |++++..+.. |.||||+|+..|+.++|++|+++|+  +++..+ ..|.||||+|+
T Consensus        44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~g~t~L~~A~  119 (244)
T 3ui2_A           44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGA--DLDHRDMRGGLTALHMAA  119 (244)
T ss_dssp             HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTT-SCBHHHHHHHHTCHHHHHHHHHTTC--CTTCCCSSSCCCHHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCC-CCCHHHHHHHCCCHHHHHHHHHcCC--CCCcCCCCCCCCHHHHHH
Confidence            57899999999999999999999 9999888776 9999999999999999999999999  788888 88999999999


Q ss_pred             hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy8109         336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH  414 (1011)
Q Consensus       336 ~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~  414 (1011)
                      ..|+.++|++|+++|++++..+..|.||||+|+..++.                ..+.+||++|+..|+.+++++|+++
T Consensus       120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~----------------~~~~~~l~~a~~~g~~~iv~~L~~~  182 (244)
T 3ui2_A          120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVINVLEGQ  182 (244)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT----------------CCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc----------------cCCCCHHHHHHHcChHHHHHHHHHh
Confidence            99999999999999999999999999999999874332                2347999999999999999999986

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.83  E-value=1.1e-20  Score=198.39  Aligned_cols=143  Identities=23%  Similarity=0.203  Sum_probs=130.9

Q ss_pred             CCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q psy8109         212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR  291 (1011)
Q Consensus       212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~  291 (1011)
                      ..|.||||+||..|+.++|++|++ |++++..+.           .|.||||.|+..|+.++|++|+++|++++..++..
T Consensus        43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-----------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~  110 (244)
T 3ui2_A           43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDE-----------NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG  110 (244)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCT-----------TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCC-----------CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCC
Confidence            467899999999999999999999 999988877           89999999999999999999999999999888566


Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109         292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN  371 (1011)
Q Consensus       292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g  371 (1011)
                      |.||||+|+..|+.++|++|+++|+  +++.+|..|.||||+|+..+                 ....+.+||++|+..|
T Consensus       111 g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~d~~g~t~l~~A~~~~-----------------~~~~~~~~l~~a~~~g  171 (244)
T 3ui2_A          111 GLTALHMAAGYVRPEVVEALVELGA--DIEVEDERGLTALELAREIL-----------------KTTPKGNPMQFGRRIG  171 (244)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHHH-----------------TTCCCSSHHHHHHHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCcHHHHHHHHH-----------------hccCCCCHHHHHHHcC
Confidence            9999999999999999999999999  78999999999999998632                 2246789999999999


Q ss_pred             ChhHHHHHHhcCCC
Q psy8109         372 CLEVFNYLVNHGCD  385 (1011)
Q Consensus       372 ~~~iv~~Ll~~g~~  385 (1011)
                      +.+++++|++++.+
T Consensus       172 ~~~iv~~L~~~~~~  185 (244)
T 3ui2_A          172 LEKVINVLEGQVFE  185 (244)
T ss_dssp             HHHHHHHHHHHHEE
T ss_pred             hHHHHHHHHHhccc
Confidence            99999999997554

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.83  E-value=5.3e-21  Score=177.51  Aligned_cols=117  Identities=26%  Similarity=0.243  Sum_probs=106.4

Q ss_pred             cCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHH
Q psy8109         752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAF  831 (1011)
Q Consensus       752 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~  831 (1011)
                      +..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|+||||+|+.
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~tpL~~A~~   82 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAVY   82 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHH
Confidence            45688999999999999999999999999999999999999999999999999999999999997 78899999999999


Q ss_pred             cCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHH
Q psy8109         832 HNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWD  869 (1011)
Q Consensus       832 ~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~  869 (1011)
                      .|+.+++++|+++|++++.+|..|+|||++|+..+..+
T Consensus        83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~  120 (123)
T 3aaa_C           83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA  120 (123)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence            99999999999999999999999999999995444333

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.80  E-value=2.3e-19  Score=191.73  Aligned_cols=126  Identities=24%  Similarity=0.209  Sum_probs=113.9

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHCCCCCC------CCCcCCCCcccccccC---ChHHHHHHHHHcCCCccccccCCCChH
Q psy8109         755 NRTALNFAAFGNNLDLLKFLLKAGADPD------ILDLKDTSPLLSSCRQ---GLYEIVDTLLEYNADTNLRTIKHGSTA  825 (1011)
Q Consensus       755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~------~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~g~t~  825 (1011)
                      ..++|+.|+..|+.+.+..++..|++++      ..+..|.||||+|+..   |+.++|++|+++|++++. .+..|+||
T Consensus       130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-~d~~g~Tp  208 (278)
T 1dcq_A          130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-QTGKGSTA  208 (278)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-CCTTCCCH
T ss_pred             hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc-cCCCCCCH
Confidence            3468889999999999999999998844      4478899999999998   899999999999999997 78899999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109         826 LHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI  881 (1011)
Q Consensus       826 L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~  881 (1011)
                      ||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++.
T Consensus       209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~  264 (278)
T 1dcq_A          209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR  264 (278)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            99999999999999999999999999999999999999999999999999998853

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.80  E-value=7.5e-20  Score=189.49  Aligned_cols=134  Identities=24%  Similarity=0.233  Sum_probs=91.0

Q ss_pred             CCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCccccc
Q psy8109         211 HSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEK-GANPLAIEK  289 (1011)
Q Consensus       211 ~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~  289 (1011)
                      +..|.|+||+||..|+.++|++|++.|++++..+.           .|.||||+||..|+.++|++|++. |++++..+.
T Consensus        70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~  138 (222)
T 3ehr_A           70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDK-----------AGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK  138 (222)
T ss_dssp             EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCT
T ss_pred             ccccccccccccccCcHHHHHHHHhCCCCccccCC-----------CCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCC
Confidence            34577888888888888888888888877776665           677777777777777777777777 777766665


Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCC
Q psy8109         290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGND  358 (1011)
Q Consensus       290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~  358 (1011)
                      . |.||||+|+..|+.++|++|+++|+  +++..+..|.|||++|+..|+.++++.|++.|+..+..+.
T Consensus       139 ~-g~tpL~~A~~~~~~~~v~~Ll~~ga--~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~  204 (222)
T 3ehr_A          139 L-GDTALHAAAWKGYADIVQLLLAKGA--RTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA  204 (222)
T ss_dssp             T-SCCHHHHHHHHTCHHHHHHHHHHTC--CSCCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred             C-CCCHHHHHHHcCCHHHHHHHHHcCC--CCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence            5 7777777777777777777777777  6677777777777777777777777777777776654443

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.80  E-value=2.5e-19  Score=191.44  Aligned_cols=174  Identities=22%  Similarity=0.196  Sum_probs=112.5

Q ss_pred             CCCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCC----------------CccccCC----CCCChHHHHHHHcC
Q psy8109         210 SHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVP----------------LNYSRRI----IETDTPLHSAILNS  269 (1011)
Q Consensus       210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~----------------~~~~~~~----~~~~t~L~~A~~~g  269 (1011)
                      .+.++.+.|+.+...|+..+.+++...-...........                ..+....    ....++|+.|+..|
T Consensus        62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~  141 (278)
T 1dcq_A           62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR  141 (278)
T ss_dssp             TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred             cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence            456777888888888887776665432111110000000                0000000    01124677777777


Q ss_pred             CHHHHHHHHHcCCCCcccc-----cCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHH
Q psy8109         270 DIELVKLLLEKGANPLAIE-----KSRNRTALHVAAIV---ESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLE  341 (1011)
Q Consensus       270 ~~~iv~~Ll~~g~~~~~~~-----~~~g~t~L~~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~  341 (1011)
                      +++.++.+++.|++++...     +..|.||||+|+..   |+.++|++|+++|+  ++|.+|..|.||||+|+..|+.+
T Consensus       142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga--~in~~d~~g~TpLh~A~~~g~~~  219 (278)
T 1dcq_A          142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG--NLDKQTGKGSTALHYCCLTDNAE  219 (278)
T ss_dssp             CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS--CTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCC--CccccCCCCCCHHHHHHHcCCHH
Confidence            7777777777777654321     23377777777777   77777777777777  67777777777777777777777


Q ss_pred             HHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCC
Q psy8109         342 IVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD  385 (1011)
Q Consensus       342 iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  385 (1011)
                      +|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++
T Consensus       220 ~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  263 (278)
T 1dcq_A          220 CLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  263 (278)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             HHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            77777777777777777777777777777777777777777764

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.79  E-value=1.5e-19  Score=199.50  Aligned_cols=146  Identities=23%  Similarity=0.219  Sum_probs=119.7

Q ss_pred             ccCCCccHHHHHHhC-CCHHHHHHHHHCCCCCCCCC--cCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHH
Q psy8109         751 RNFNNRTALNFAAFG-NNLDLLKFLLKAGADPDILD--LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH  827 (1011)
Q Consensus       751 ~~~~g~t~L~~Aa~~-g~~~iv~~Ll~~gad~~~~d--~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~  827 (1011)
                      ....+.|+||.|+.. |+.+++++|+++|++++..+  ..|.||||+|+..|+.++|++|+++|++++. .+..|+||||
T Consensus       195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-~d~~G~TpLh  273 (368)
T 3jue_A          195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-ADSAGRGPLH  273 (368)
T ss_dssp             --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHH
T ss_pred             ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHH
Confidence            344577899999999 99999999999999999988  8899999999999999999999999999997 8889999999


Q ss_pred             HHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC---cccccccCCCHHhhHHh
Q psy8109         828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN---IEKATKYRMTFESSKVV  897 (1011)
Q Consensus       828 ~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~---~~~~~~~g~t~l~~a~~  897 (1011)
                      +|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+..|..   ....+..+.|++++...
T Consensus       274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~  346 (368)
T 3jue_A          274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD  346 (368)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred             HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999987643   33445566677665543

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.78  E-value=3.4e-19  Score=155.90  Aligned_cols=92  Identities=41%  Similarity=0.628  Sum_probs=72.0

Q ss_pred             CCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCC
Q psy8109         788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN  867 (1011)
Q Consensus       788 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~  867 (1011)
                      |+||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~   80 (93)
T 1n0q_A            2 GRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (93)
T ss_dssp             -CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence            56666666666667777777777777665 56678888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHHhcCCC
Q psy8109         868 WDIVTFLLDAGSN  880 (1011)
Q Consensus       868 ~~iv~~Ll~~ga~  880 (1011)
                      .+++++|+++||+
T Consensus        81 ~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           81 LEVVKLLLEAGAY   93 (93)
T ss_dssp             HHHHHHHHHTTCC
T ss_pred             HHHHHHHHHcCCC
Confidence            8888888888875

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.76  E-value=2.5e-18  Score=150.38  Aligned_cols=92  Identities=45%  Similarity=0.691  Sum_probs=73.3

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109         292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN  371 (1011)
Q Consensus       292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g  371 (1011)
                      |+||||+|+..|+.+++++|+++|+  +++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~g~--~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~   79 (93)
T 1n0q_A            2 GRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (93)
T ss_dssp             -CCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            6778888888888888888888777  67777788888888888888888888888888888888888888888888888


Q ss_pred             ChhHHHHHHhcCCC
Q psy8109         372 CLEVFNYLVNHGCD  385 (1011)
Q Consensus       372 ~~~iv~~Ll~~g~~  385 (1011)
                      +.+++++|+++|++
T Consensus        80 ~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           80 HLEVVKLLLEAGAY   93 (93)
T ss_dssp             CHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCC
Confidence            88888888887764

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.76  E-value=2.1e-18  Score=190.46  Aligned_cols=144  Identities=23%  Similarity=0.236  Sum_probs=87.0

Q ss_pred             CcchHHHHHHHc-CCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q psy8109         213 QGYKALCWALQE-KKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR  291 (1011)
Q Consensus       213 ~g~t~L~~Aa~~-G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~  291 (1011)
                      .+.|+||+|+.. |+++++++|++.|++++..+.         ...|.||||+|+..|+.++|++|+++|++++..+.. 
T Consensus       198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~---------~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~-  267 (368)
T 3jue_A          198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNG---------GQDNATPLIQATAANSLLACEFLLQNGANVNQADSA-  267 (368)
T ss_dssp             CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCT---------TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-
T ss_pred             CCCcHHHHHHHccCCHHHHHHHHHcCCCCCcccc---------ccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC-
Confidence            455677777777 777777777777777765541         015667777777777777777777777777665554 


Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCC---CccCCCCCCcHHHHHH
Q psy8109         292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD---INSGNDDGCTPLFCAI  368 (1011)
Q Consensus       292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~---~n~~~~~g~t~L~~A~  368 (1011)
                      |.||||+|+..|+.++|++|+++|+  +++..|..|.||||+|+..|+.+++++|+..+..   ....+..+.|+++.+.
T Consensus       268 G~TpLh~A~~~g~~~~v~~LL~~Ga--d~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~  345 (368)
T 3jue_A          268 GRGPLHHATILGHTGLACLFLKRGA--DLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR  345 (368)
T ss_dssp             SCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred             CCCHHHHHHHcCcHHHHHHHHHCcC--CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence            6777777777777777777777776  5666777777777777777777777777665422   2223334455555444

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.75  E-value=5.9e-19  Score=161.47  Aligned_cols=106  Identities=32%  Similarity=0.404  Sum_probs=59.1

Q ss_pred             CcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHH
Q psy8109         785 DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQ  864 (1011)
Q Consensus       785 d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~  864 (1011)
                      |..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus         6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~   84 (115)
T 2l6b_A            6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-RSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK   84 (115)
T ss_dssp             SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence            33444444444444444444444444444443 44455556666666666666666666666666666666666666666


Q ss_pred             cCCHHHHHHHHhcCCCcccccccCCCH
Q psy8109         865 AKNWDIVTFLLDAGSNIEKATKYRMTF  891 (1011)
Q Consensus       865 ~g~~~iv~~Ll~~ga~~~~~~~~g~t~  891 (1011)
                      .|+.+++++|+++|++++..+..|.+|
T Consensus        85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~  111 (115)
T 2l6b_A           85 NGHHEIVKLLDAKGADVNARSWGSSHH  111 (115)
T ss_dssp             TTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred             CCCHHHHHHHHHcCCCCCcCCcccccc
Confidence            666666666666666666666655554

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.74  E-value=1.8e-18  Score=158.22  Aligned_cols=109  Identities=31%  Similarity=0.320  Sum_probs=101.4

Q ss_pred             cccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHH
Q psy8109         750 LRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTA  829 (1011)
Q Consensus       750 ~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~A  829 (1011)
                      .+|..|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~tpl~~A   82 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-RSKDGNTPEHLA   82 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-CCTTCCCTTHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHHH
Confidence            4678899999999999999999999999999999999999999999999999999999999999997 778999999999


Q ss_pred             HHcCCHHHHHHHHhccCCcccccCCCCCHH
Q psy8109         830 AFHNQLDIIKLLLKYNADINAEDKYGKIAF  859 (1011)
Q Consensus       830 a~~g~~~iv~~Ll~~ga~in~~d~~g~taL  859 (1011)
                      +..|+.+++++|+++|+++|.++..|.||-
T Consensus        83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           83 KKNGHHEIVKLLDAKGADVNARSWGSSHHH  112 (115)
T ss_dssp             HTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred             HHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence            999999999999999999999999998873

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.62  E-value=1.1e-15  Score=138.15  Aligned_cols=90  Identities=23%  Similarity=0.288  Sum_probs=81.3

Q ss_pred             ccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHh
Q psy8109         818 TIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVV  897 (1011)
Q Consensus       818 ~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~  897 (1011)
                      .+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|+|||++|+.
T Consensus        20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~   99 (110)
T 2zgd_A           20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID   99 (110)
T ss_dssp             --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence            45688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCHHHHHHh
Q psy8109         898 EKHVAKLRAA  907 (1011)
Q Consensus       898 ~~~~~~~~~~  907 (1011)
                      .|+.++++.+
T Consensus       100 ~~~~~~~~~L  109 (110)
T 2zgd_A          100 NGNEDLAEIL  109 (110)
T ss_dssp             HTCHHHHHHH
T ss_pred             cCCHHHHHHh
Confidence            9999988765

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.59  E-value=4.2e-15  Score=134.23  Aligned_cols=86  Identities=34%  Similarity=0.439  Sum_probs=60.0

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109         292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN  371 (1011)
Q Consensus       292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g  371 (1011)
                      |.|+||+|+..|+.+++++|+++|+  +++..|..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|
T Consensus        24 g~t~L~~A~~~g~~~~v~~Ll~~g~--~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~  101 (110)
T 2zgd_A           24 LGKKLLEAARAGQDDEVRILMANGA--DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNG  101 (110)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcC
Confidence            5666777777777777777776666  56666666777777777777777777777777777766767777777777777


Q ss_pred             ChhHHHHH
Q psy8109         372 CLEVFNYL  379 (1011)
Q Consensus       372 ~~~iv~~L  379 (1011)
                      +.+++++|
T Consensus       102 ~~~~~~~L  109 (110)
T 2zgd_A          102 NEDLAEIL  109 (110)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHh
Confidence            77776665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	1011
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-71
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-69
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-68
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-50
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-29
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-44
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-39
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-37
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-34
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	8e-34
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-09
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-34
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	7e-30
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-29
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-23
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-23
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	6e-18
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-14
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-32
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	6e-29
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-23
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-15
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-28
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-27
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-26
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-25
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-23
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-21
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-14
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-12
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-09
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	5e-07
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-28
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-26
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-24
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-22
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-17
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	8e-14
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-06
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	5e-06
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-28
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-23
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-22
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-21
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-19
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	7e-12
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	4e-08
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-25
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-25
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-24
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-23
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-23
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-20
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-20
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-16
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-24
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-23
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-23
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	7e-22
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	9e-20
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-18
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-18
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-13
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	6e-12
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	7e-09
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-22
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-20
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-20
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-20
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-19
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-17
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-17
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	3e-13
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-05
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-22
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-21
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-18
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-14
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-09
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-07
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-21
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	8e-18
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-17
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-15
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	9e-15
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-14
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-13
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-09
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	6e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-16
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-11
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-11
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	5e-11
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-10
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	7e-10
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-06
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.002
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-16
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	8e-12
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-11
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-10
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	7e-10
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	5e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	7e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	6e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	1e-15
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-15
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-14
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-12
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	1e-11
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-10
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-09
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-08
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	7e-13
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-10
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-10
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-10
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-07
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-07
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-09
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-08
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	4e-08
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-06
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	6e-06
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	7e-06
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	2e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	8e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	0.002
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	0.004
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	9e-09
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-08
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	7e-08
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	4e-07
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-06
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-05
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-05
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	5e-05
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	7e-05
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	5e-04
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	0.002

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  240 bits (613), Expect = 2e-71
 Identities = 113/399 (28%), Positives = 170/399 (42%), Gaps = 14/399 (3%)

Query: 294 TALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADI 353
           T LHVA+ +  + IVK L   GA  S NV NV   TPLH+A R    E+ K LL   A +
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGA--SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59

Query: 354 NSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLK 413
           N+   D  TPL CA       +   L+ +  + ++           +           L 
Sbjct: 60  NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL 119

Query: 414 HIN--INHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNL 471
                     K G+TPL  + K    + V   ++E  A   A   +G T LH+A +  NL
Sbjct: 120 EKEASQACMTKKGFTPLHVAAK-YGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL 178

Query: 472 AMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVA 530
            +V  L+      +S    G TP++ A K N +E+   LL+ G     +     T LH+A
Sbjct: 179 DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLA 238

Query: 531 CEFASIEMVSFLLSHIG-VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND-- 587
            +    EMV+ LLS     NL +  G TPLH       + V + LI     +        
Sbjct: 239 AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGY 298

Query: 588 SPLHLACATGNMDMITY-AMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVN 646
           +PLH+A   GN+ ++ +      DVN +  +G +PLH A   G  + V  LL       N
Sbjct: 299 TPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK-NGASPN 357

Query: 647 HKTKDGSTALFFACYDKRLDLVEIL---LEANADVNLGD 682
             + DG+T L  A     + + ++L    +  + V + D
Sbjct: 358 EVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSD 396

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  234 bits (597), Expect = 5e-69
 Identities = 112/398 (28%), Positives = 179/398 (44%), Gaps = 12/398 (3%)

Query: 328 LTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLS 387
           LTPLH+A     L IVK LL +GA  N  N    TPL  A      EV  YL+ +   ++
Sbjct: 1   LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 60

Query: 388 VPEGE-RTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIE 446
               + +T LH A++ G+  MV  LL++    +               +  +E   +++E
Sbjct: 61  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 120

Query: 447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEI 505
             A        G T LH+A  +G + +   L++     N+    G TP++ A+ +N+L+I
Sbjct: 121 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDI 180

Query: 506 FNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLS-HIGVNLQDNKGCTPLHCAIV 564
             LLL  G        + +T LH+A +   +E+   LL      N +  +G TPLH A  
Sbjct: 181 VKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 240

Query: 565 GNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAMKY-FDVNIENDIGETP 621
               E+   L++  A+  +      +PLHL    G++ +    +K+   V+    +G TP
Sbjct: 241 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP 300

Query: 622 LHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLG 681
           LHVA  +G ++ VKF L     DVN KTK G + L  A      D+V +LL+  A  N  
Sbjct: 301 LHVASHYGNIKLVKF-LLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEV 359

Query: 682 DGT-YTPLYTALMKDPSLDIIKML---VKYGADVNLTN 715
                TPL  A      + +  +L       + V +++
Sbjct: 360 SSDGTTPLAIAKRLG-YISVTDVLKVVTDETSFVLVSD 396

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  233 bits (594), Expect = 1e-68
 Identities = 112/412 (27%), Positives = 176/412 (42%), Gaps = 15/412 (3%)

Query: 492 TPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNL 550
           TP++ A    HL I   LL+ GA   V      T LH+A      E+  +LL +   VN 
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 551 QDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFD 610
           +     TPLHCA       +   L+ +NA+  +        L  A     + T       
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 611 ---VNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDL 667
                     G TPLHVA  +G +   + LL  ++   N   K+G T L  A +   LD+
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDI 180

Query: 668 VEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHY 726
           V++LL      +      YTPL+ A  ++  +++ + L++YG   N  +     +TPLH 
Sbjct: 181 VKLLLPRGGSPHSPAWNGYTPLHIAAKQNQ-VEVARSLLQYGGSANAES--VQGVTPLHL 237

Query: 727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           A+  G    +A  L ++ N ++   N +  T L+  A   ++ +   L+K G   D    
Sbjct: 238 AAQEGHAEMVALLLSKQANGNL--GNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR 295

Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846
              +PL  +   G  ++V  LL++ AD N +T K G + LH AA     DI+ LLLK  A
Sbjct: 296 MGYTPLHVASHYGNIKLVKFLLQHQADVNAKT-KLGYSPLHQAAQQGHTDIVTLLLKNGA 354

Query: 847 DINAEDKYGKIAFHSACQAKNWDIVTFL---LDAGSNIEKATKYRMTFESSK 895
             N     G      A +     +   L    D  S +  + K+RM+F  + 
Sbjct: 355 SPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETV 406

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (459), Expect = 3e-50
 Identities = 104/397 (26%), Positives = 168/397 (42%), Gaps = 50/397 (12%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDI 271
            +    L  A +   T++AK L+     +N   K           +  TPLH A      
Sbjct: 31  VKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAK-----------DDQTPLHCAARIGHT 79

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
            +VKLLLE  ANP  +  +   T LH+AA    V+ V  L +  A          G TPL
Sbjct: 80  NMVKLLLENNANP-NLATTAGHTPLHIAAREGHVETVLALLEKEAS--QACMTKKGFTPL 136

Query: 332 HIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG 391
           H+A +   + + ++LL++ A  N+   +G TPL  A+  N L++   L+  G        
Sbjct: 137 HVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS------ 190

Query: 392 ERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
                                     +    +G+TPL  + K Q  +EV  S+++ G   
Sbjct: 191 -------------------------PHSPAWNGYTPLHIAAK-QNQVEVARSLLQYGGSA 224

Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLVKHID-INSENDLGKTPIYFAIKNNHLEIFNLLL 510
            A+ + G T LHLA   G+  MV  L+      N  N  G TP++   +  H+ + ++L+
Sbjct: 225 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLI 284

Query: 511 KLGADVAVKMKSNFTCLHVACEFASIEMVSF-LLSHIGVNLQDNKGCTPLHCAIVGNQLE 569
           K G  V    +  +T LHVA  + +I++V F L     VN +   G +PLH A      +
Sbjct: 285 KHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD 344

Query: 570 VFNHLINSNADITMYKND--SPLHLACATGNMDMITY 604
           +   L+ + A      +D  +PL +A   G + +   
Sbjct: 345 IVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDV 381

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (298), Expect = 3e-29
 Identities = 58/202 (28%), Positives = 83/202 (41%), Gaps = 34/202 (16%)

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
           +TPLH AS+ G    I + L+ +  A   + N    T L+ AA   + ++ K+LL+  A 
Sbjct: 1   LTPLHVASFMGHL-PIVKNLL-QRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK 58

Query: 781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTI--------------------- 819
            +     D +PL  + R G   +V  LLE NA+ NL T                      
Sbjct: 59  VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL 118

Query: 820 -----------KHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW 868
                      K G T LH AA + ++ + +LLL+ +A  NA  K G    H A    N 
Sbjct: 119 LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL 178

Query: 869 DIVTFLLDAGSNIEKATKYRMT 890
           DIV  LL  G +         T
Sbjct: 179 DIVKLLLPRGGSPHSPAWNGYT 200

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (405), Expect = 2e-44
 Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 20/282 (7%)

Query: 256 IETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYG 315
           +E +  L  A+ N D++LV+ LLE GAN    E+    T LH A  +   DIV+LL  +G
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62

Query: 316 AEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
           A+  +  +N A  TP  +A     ++++K+ L KGAD+N  +  G T    A     ++ 
Sbjct: 63  ADPVLRKKNGA--TPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120

Query: 376 FNYLVNHGCDLSVP-----------EGERTALHMASQFGNLEMVNYLLKH--ININHQDK 422
             +L   G ++++            +G  TAL  A++ G++E++  LL     ++N  D 
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN 180

Query: 423 DG---WTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK 479
            G         S        + H +++ GAD+  +   G T L LA    +L +V  L++
Sbjct: 181 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240

Query: 480 H--IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVK 519
              I+IN  +  GKT +  A++    +I  LL K GA     
Sbjct: 241 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 1e-39
 Identities = 76/334 (22%), Positives = 128/334 (38%), Gaps = 55/334 (16%)

Query: 456 MDGTTALHLACYFGNLAMVNYLVKH-IDINSE-NDLGKTPIYFAIKNNHLEIFNLLLKLG 513
           ++    L  A    ++ +V  L++   ++N +  + G TP++ A++ +  +I  LLL+ G
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62

Query: 514 ADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFN 572
           AD  ++ K+  T   +A    S++++   LS    VN  D  G T    A V  +++   
Sbjct: 63  ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALK 122

Query: 573 HLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLE 632
            L    A++ + +                        D       G T L  A   G +E
Sbjct: 123 FLYKRGANVNLRR--------------------KTKEDQERLRKGGATALMDAAEKGHVE 162

Query: 633 AVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTAL 692
            +K LL+    DVN     G  AL  A        VE                       
Sbjct: 163 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE----------------------- 199

Query: 693 MKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRN 752
                  I  +L+ +GADVN+  E     TPL  A  +     + + L+E+ + +I   +
Sbjct: 200 ------AITHLLLDHGADVNVRGE--RGKTPLILAVEKKHL-GLVQRLLEQEHIEINDTD 250

Query: 753 FNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
            + +TAL  A       + + L K GA  D  DL
Sbjct: 251 SDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (352), Expect = 2e-37
 Identities = 76/360 (21%), Positives = 124/360 (34%), Gaps = 89/360 (24%)

Query: 329 TPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV 388
             L  A + + +++V+ LL+ GA++N   ++G                            
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEG---------------------------- 38

Query: 389 PEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
                T LH A Q    ++V  LL+H       K              S+++    +  G
Sbjct: 39  ---GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95

Query: 449 ADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNL 508
           AD+      G TA   A  +G +  + +L K     +     K       K         
Sbjct: 96  ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGA------ 149

Query: 509 LLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGN 566
                           T L  A E   +E++  LL  +G  VN  DN G   L  A++ +
Sbjct: 150 ----------------TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 193

Query: 567 Q----LEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPL 622
                  + + L++  AD                              VN+  + G+TPL
Sbjct: 194 DDSDVEAITHLLLDHGAD------------------------------VNVRGERGKTPL 223

Query: 623 HVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGD 682
            +AV    L  V+ LL  ++I++N    DG TAL  A   K   + E+L +  A  + GD
Sbjct: 224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (326), Expect = 6e-34
 Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 18/283 (6%)

Query: 585 KNDSPLHLACATGNMDMITYAMKY-FDVNIENDI-GETPLHVAVSHGCLEAVKFLLNTKN 642
           +++  L  A    ++D++   ++   +VN + +  G TPLH AV     + V+ LL    
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 643 IDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIK 702
             V  K    +  L  A       L   L +           +T    A +      +  
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 703 MLVKYGADVNLTNEACYY--------MTPLHYASYRGDCNDIARFLVEECNADITLRNFN 754
           +  K GA+VNL  +             T L  A+ +G   ++ + L++E  AD+   +  
Sbjct: 124 LY-KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV-EVLKILLDEMGADVNACDNM 181

Query: 755 NRTALNFAAFGNN----LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLE- 809
            R AL  A   ++      +   LL  GAD ++   +  +PL+ +  +    +V  LLE 
Sbjct: 182 GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 241

Query: 810 YNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED 852
            + + N      G TAL  A       I +LL K  A  +  D
Sbjct: 242 EHIEINDTD-SDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (325), Expect = 8e-34
 Identities = 75/280 (26%), Positives = 116/280 (41%), Gaps = 19/280 (6%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKD-GSTALFFACYDKRLDLVEILLEANA 676
               L  AV +  ++ V+ LL     +VN + ++ G T L  A    R D+VE+LL   A
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 677 DVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI 736
           D  L        +       S+ ++K+ +  GADVN  +   Y  T    A+  G    +
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECD--FYGFTAFMEAAVYGKVKAL 121

Query: 737 ARFLVEECNAD--------ITLRNFNNRTALNFAAFGNNLDLLKFLL-KAGADPDILD-- 785
                   N +                 TAL  AA   ++++LK LL + GAD +  D  
Sbjct: 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM 181

Query: 786 --LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLL- 842
                   LLSS    +  I   LL++ AD N+R  + G T L  A     L +++ LL 
Sbjct: 182 GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG-ERGKTPLILAVEKKHLGLVQRLLE 240

Query: 843 KYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882
           + + +IN  D  GK A   A + K   I   L   G++ +
Sbjct: 241 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (140), Expect = 1e-09
 Identities = 29/106 (27%), Positives = 52/106 (49%)

Query: 786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN 845
           ++D   L+ + +    ++V  LLE  A+ N +  + G T LH A   ++ DI++LLL++ 
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62

Query: 846 ADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTF 891
           AD     K G   F  A  A +  ++   L  G+++ +   Y  T 
Sbjct: 63  ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTA 108

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  132 bits (333), Expect = 3e-34
 Identities = 46/352 (13%), Positives = 115/352 (32%), Gaps = 32/352 (9%)

Query: 180 SSDSNSDKALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKK--TDIAKLLVDKG 237
            +D            N+F+ F +  +   L      +A+   L   K    + +LL    
Sbjct: 11  ENDPQLRLIPWILWENLFQHF-ISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYY 69

Query: 238 VPLNLVDKGVPLNYSRRIIETDTPLHSAILN---SDIELVKLLLEKGANPLAIEKSRNRT 294
              N   K +  +  ++ I+++     A +    S ++ + LLL        I+   N  
Sbjct: 70  AHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA-ENYQ 128

Query: 295 ALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADIN 354
           A  +AA    + ++  L +    + + +          +A     L ++  L +      
Sbjct: 129 AFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEA 188

Query: 355 S---GNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYL 411
           +     ++     + A+ +    V N+L++    L+       A     ++G   +  ++
Sbjct: 189 TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA------YAEIHEFEYGEKYVNPFI 242

Query: 412 LKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNL 471
            +H+N     K+            ++ +    ++     ++   M     L        L
Sbjct: 243 ARHVNRL---KEMHDAFKL-----SNPDGVFDLVTKSECLQGFYML--RNLIRRNDEVLL 292

Query: 472 AMVNYLVKH------IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVA 517
             + +L+            +        +  A++  +     LLL + + +A
Sbjct: 293 DDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLA 344

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  119 bits (299), Expect = 7e-30
 Identities = 49/338 (14%), Positives = 83/338 (24%), Gaps = 49/338 (14%)

Query: 552 DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDV 611
             K    +      N  +V   L    A      N +   L                 D 
Sbjct: 43  SYKEAIHIFLPGTKNMEQVRQLLCLYYAHY----NRNAKQLWS---------------DA 83

Query: 612 NIENDIGETPLHVAVSHGCLEAVKFL--LNTKNIDVNHKTKDGSTALFFACYDKRLDLVE 669
           + +    E    VA   GC  A+  L  L T +  V     +   A   A  +  L ++ 
Sbjct: 84  HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLN 143

Query: 670 ILLEANADVNLGDGT---YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHY 726
            L E      +       Y     A  ++  L ++  L +                   +
Sbjct: 144 RLCELAPTEIMAMIQAENYHAFRLA-AENGHLHVLNRLCELAPTEATAMIQAENYYAFRW 202

Query: 727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL 786
           A+     +++  FL++               A           +  F+ +          
Sbjct: 203 AAVGRGHHNVINFLLD--------CPVMLAYAEIHEFEYGEKYVNPFIARHVNR----LK 250

Query: 787 KDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLL---- 842
           +       S   G++++V           L         L        LD I+ LL    
Sbjct: 251 EMHDAFKLSNPDGVFDLVTKSECLQGFYML-------RNLIRRNDEVLLDDIRFLLSIPG 303

Query: 843 -KYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879
            K  A               A +  N      LL   S
Sbjct: 304 IKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS 341

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  119 bits (298), Expect = 1e-29
 Identities = 41/375 (10%), Positives = 101/375 (26%), Gaps = 53/375 (14%)

Query: 287 IEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKIL 346
           IE   N   L +   +   ++ +  F    E S+   +      + +   +   ++ ++L
Sbjct: 7   IENYENDPQLRLIPWILWENLFQH-FISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLL 65

Query: 347 LDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLE 406
               A  N       +       ++                          +A+  G   
Sbjct: 66  CLYYAHYNRNAKQLWSDAHKKGIKS---------------------EVICFVAAITGCSS 104

Query: 407 MVNYLL----KHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMD--GTT 460
            ++ L         +     + +     + +    L V + + E        ++      
Sbjct: 105 ALDTLCLLLTSDEIVKVIQAENYQAFRLAAE-NGHLHVLNRLCELAPTEIMAMIQAENYH 163

Query: 461 ALHLACYFGNLAMVNYLVKH----IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
           A  LA   G+L ++N L +          + +      + A+   H  + N LL     +
Sbjct: 164 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVML 223

Query: 517 AVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLIN 576
           A              E+    +  F+  H+    +  +       +      ++      
Sbjct: 224 A-------YAEIHEFEYGEKYVNPFIARHVN---RLKEMHDAFKLSNPDGVFDLVTK--- 270

Query: 577 SNADITMYKNDSPLHLACATGNMDMITYAMKYF------DVNIENDIGETPLHVAVSHGC 630
            +  +  +     L        +D I + +                     L +A+  G 
Sbjct: 271 -SECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGN 329

Query: 631 LEAVKFLLNTKNIDV 645
             A   LL+  ++  
Sbjct: 330 QGACALLLSIPSVLA 344

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  100 bits (249), Expect = 3e-23
 Identities = 53/358 (14%), Positives = 92/358 (25%), Gaps = 48/358 (13%)

Query: 412 LKHININHQDKDGWTPLTCSIKGQASLEVF-HSIIEAGADIKAKLMDGTTALHLACYFGN 470
           L   NI + + D    L   I       +F H I      +          + L      
Sbjct: 2   LTIHNIENYENDPQLRL---IPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNM 58

Query: 471 LAMVNYLVKHI------------DINSENDLGKTPIYFAIKNNH---LEIFNLLLKLGAD 515
             +   L  +             D + +    +   + A        L+   LLL     
Sbjct: 59  EQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEI 118

Query: 516 VAVKMKSNFTCLHVACEFASIEMVSFLLSH---IGVNLQDNKGCTPLHCAIVGNQLEVFN 572
           V V    N+    +A E   + +++ L        + +   +       A     L V N
Sbjct: 119 VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLN 178

Query: 573 HLINSNAD-----ITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVS 627
            L           I      +    A   G+ ++I + +          +          
Sbjct: 179 RLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC------PVMLAYAEIHEFE 232

Query: 628 HGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTP 687
           +G      F+    N       K+   A   +  D   DLV       ++   G      
Sbjct: 233 YGEKYVNPFIARHVNRL-----KEMHDAFKLSNPDGVFDLVT-----KSECLQGFYMLRN 282

Query: 688 LYTALMKDPSLDIIKMLVKYGADVNLTNEAC---YYMTPLHYASYRGDCNDIARFLVE 742
           L     +   LD I+ L+       L   A         L  A   G+       L+ 
Sbjct: 283 LIRRNDEVL-LDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGN-QGACALLLS 338

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =   99 bits (248), Expect = 3e-23
 Identities = 37/318 (11%), Positives = 80/318 (25%), Gaps = 36/318 (11%)

Query: 584 YKNDSPLHLACATGNMDMITYAMKYFDVNIE--NDIGETPLHVAVSHGCLEAVKFL---- 637
           Y+ND  L L       ++  + +   ++++   +      + +  +    +  + L    
Sbjct: 10  YENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYY 69

Query: 638 ------LNTKNIDVNHKTKDGSTALFFAC---YDKRLDLVEILLEANADVNLGDGT-YTP 687
                       D + K        F A        LD + +LL ++  V +     Y  
Sbjct: 70  AHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQA 129

Query: 688 LYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN-A 746
              A      L ++  L +      +             A+  G  + + R        A
Sbjct: 130 FRLAAENG-HLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEA 188

Query: 747 DITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDT 806
              ++  N       A    + +++ FLL                 +     G   +   
Sbjct: 189 TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPF 241

Query: 807 LLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAK 866
           +  +              A   +      D++            +  Y            
Sbjct: 242 IARHVNRLK-----EMHDAFKLSNPDGVFDLV------TKSECLQGFYMLRNLIRRNDEV 290

Query: 867 NWDIVTFLLDAGSNIEKA 884
             D + FLL        A
Sbjct: 291 LLDDIRFLLSIPGIKALA 308

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 84.2 bits (207), Expect = 6e-18
 Identities = 26/208 (12%), Positives = 64/208 (30%), Gaps = 18/208 (8%)

Query: 710 DVNLTNEACYYMTPLHYASYRGDCNDIARFLV----------EECNADITLRNFNNRTAL 759
           +++L   +      +     + +   + + L           ++  +D   +   +    
Sbjct: 36  ELSLMTLSYKEAIHIFLPGTK-NMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVIC 94

Query: 760 NFAAFGNN---LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
             AA       LD L  LL +     ++  ++      +   G   +++ L E      +
Sbjct: 95  FVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM 154

Query: 817 RTI-KHGSTALHTAAFHNQLDIIKLLLKYNADIN---AEDKYGKIAFHSACQAKNWDIVT 872
             I      A   AA +  L ++  L +          + +       +A    + +++ 
Sbjct: 155 AMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 214

Query: 873 FLLDAGSNIEKATKYRMTFESSKVVEKH 900
           FLLD    +  A  +   +    V    
Sbjct: 215 FLLDCPVMLAYAEIHEFEYGEKYVNPFI 242

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 73.0 bits (178), Expect = 3e-14
 Identities = 22/200 (11%), Positives = 52/200 (26%), Gaps = 17/200 (8%)

Query: 734 NDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDL------- 786
            ++ +  +      +   ++     +      N   + + L    A  +           
Sbjct: 25  ENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAH 84

Query: 787 ----KDTSPLLSSCRQGLYEIVDT---LLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839
               K       +   G    +DT   LL  +    +        A   AA +  L ++ 
Sbjct: 85  KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ-AENYQAFRLAAENGHLHVLN 143

Query: 840 LLLKYNADINAEDK--YGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVV 897
            L +                AF  A +  +  ++  L +       A      + + +  
Sbjct: 144 RLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWA 203

Query: 898 EKHVAKLRAANIYVDKNIMV 917
                     N  +D  +M+
Sbjct: 204 AVGRGHHNVINFLLDCPVML 223

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  126 bits (315), Expect = 1e-32
 Identities = 55/278 (19%), Positives = 98/278 (35%), Gaps = 26/278 (9%)

Query: 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGA 316
           E+   LH+    S   + + +  +  N   I+   NRT LH  A   S +  + L  + A
Sbjct: 1   ESPIKLHTEAAGSY-AITEPITRESVN--IIDPRHNRTVLHWIASNSSAEKSEDLIVHEA 57

Query: 317 EK------SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ 370
           ++       VN  +    TPL +A   +   +V  L+  GAD    N    + L  A A 
Sbjct: 58  KECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAAN 117

Query: 371 NCLEVFNYLVNHGCD----------------LSVPEGERTALHMASQFGNLEMVNYLLKH 414
               +  Y++N                    +      R  +  A               
Sbjct: 118 RDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA 177

Query: 415 ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMV 474
              + +   G T L  + +      V + + E G++   +  DG T + LA   G + +V
Sbjct: 178 ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVV 237

Query: 475 NYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
            YL++    + + +    T    A  NNH  I ++  +
Sbjct: 238 MYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  115 bits (287), Expect = 6e-29
 Identities = 51/298 (17%), Positives = 93/298 (31%), Gaps = 33/298 (11%)

Query: 587 DSPLHLACATGNMDMITYAMKYFDVNIENDI-GETPLHVAVSHGCLEAVKFLLNT----- 640
           +SP+ L         IT  +    VNI +     T LH   S+   E  + L+       
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 641 --KNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSL 698
                DVN    D +T L  A   +R  LV  L++A AD  + + +          +   
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 699 DIIKMLVKYGADVNLTNEACYY-MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRT 757
            ++  ++          E     MT L   ++    + +A   +          +     
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA-- 178

Query: 758 ALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLR 817
                                   D    K  + L  + +     IV  L+        +
Sbjct: 179 ----------------------RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK 216

Query: 818 TIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL 875
             + G T +  AA   +++++  L++  A + A D     A   A    + +IV    
Sbjct: 217 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 98.3 bits (243), Expect = 3e-23
 Identities = 50/304 (16%), Positives = 96/304 (31%), Gaps = 58/304 (19%)

Query: 362 TPLFCAI-AQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH------ 414
           +P+     A     +   +     ++  P   RT LH  +   + E    L+ H      
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

Query: 415 ---ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNL 471
               ++N  D D  TPL  ++  +    +   +++AGAD         +ALH A    + 
Sbjct: 62  AAGADVNAMDCDENTPLMLAVLAR-RRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 472 AMVNYLVKHIDINSENDL---------------GKTPIYFAIKNNHLEIFNLLLKLGADV 516
            M+ Y++    +  + +                       + K    +   +     A  
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 517 AVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNL--QDNKGCTPLHCAIVGNQLEVFNHL 574
             +     T LH A + +++ +V +L+   G N   QD  G TP+  A    ++EV  +L
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240

Query: 575 INSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAV 634
           I   A +                                 +    T   +A ++     V
Sbjct: 241 IQQGASV------------------------------EAVDATDHTARQLAQANNHHNIV 270

Query: 635 KFLL 638
               
Sbjct: 271 DIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 75.9 bits (185), Expect = 1e-15
 Identities = 47/287 (16%), Positives = 102/287 (35%), Gaps = 46/287 (16%)

Query: 619 ETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADV 678
           E+P+ +        A+   +  +++++    +   T L +   +   +  E L+   A  
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEA-- 57

Query: 679 NLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIAR 738
                                  K  +  GADVN  +      TPL  A        +A 
Sbjct: 58  -----------------------KECIAAGADVNAMDC--DENTPLMLAVLARRRRLVAY 92

Query: 739 FLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP--------------DIL 784
            +    +  I  ++  +    + AA   +  ++ ++L +                   I+
Sbjct: 93  LMKAGADPTIYNKSERSAL--HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV 150

Query: 785 DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL-LK 843
              +    ++S +  + +      +  A  +    K G TALH AA  + + I+K L  +
Sbjct: 151 AHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYK-GRTALHYAAQVSNMPIVKYLVGE 209

Query: 844 YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMT 890
             ++ + +D+ GK     A Q    ++V +L+  G+++E       T
Sbjct: 210 KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHT 256

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  113 bits (283), Expect = 1e-28
 Identities = 54/239 (22%), Positives = 84/239 (35%), Gaps = 20/239 (8%)

Query: 327 GLTPLHIACRRKCLEIVKILLDKGAD---INSGNDDGCTPLFCAIAQNCLEVFNYLVNHG 383
           G T LH+A   +    +  LL   A    ++  ND G T L  A           L   G
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 384 CDL-SVPEGERTALHMASQFGNLEMVNYLLKHININHQD--------------KDGWTPL 428
             +     G  TALH+A +         LL+    + +D                   P 
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128

Query: 429 TCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSE-- 486
               +     E      +    ++A+  DG T LH+A    +  MV  L       ++  
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188

Query: 487 NDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
              G+TP++ A++     +  LLLK GAD   +M    T L  A    +  +   L +H
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  110 bits (274), Expect = 2e-27
 Identities = 56/264 (21%), Positives = 93/264 (35%), Gaps = 24/264 (9%)

Query: 259 DTPLHSAILNSDIELVKLLLEKGANPLAIEK--SRNRTALHVAAIVESVDIVKLLFDYGA 316
           DT LH A+++     +  LL   A    ++      +TALH+AAI+     V+ L+  GA
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69

Query: 317 EKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVF 376
              V  +     T LH+ACR +      +LL           D                 
Sbjct: 70  GVLVAERGGH--TALHLACRVRAHTCACVLLQPRPSHPRDASDT---------------- 111

Query: 377 NYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQ 435
              +    D +       A   +      E         + +  ++ DG TPL  ++  +
Sbjct: 112 --YLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHK 169

Query: 436 ASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPI 494
            +  V           K +   G T LHLA      +++  L+K   D  +    G+TP+
Sbjct: 170 DAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229

Query: 495 YFAIKNNHLEIFNLLLKLGADVAV 518
             A+   +  +  LL   GA    
Sbjct: 230 GSALLRPNPILARLLRAHGAPEPE 253

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  107 bits (267), Expect = 2e-26
 Identities = 51/246 (20%), Positives = 76/246 (30%), Gaps = 24/246 (9%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH----IDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
           DG TALHLA    +   +++L+        ++ +NDLG+T ++ A           L   
Sbjct: 8   DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67

Query: 513 GADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGV---------------NLQDNKGCT 557
           GA V V  +   T LH+AC   +      LL                       D     
Sbjct: 68  GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP 127

Query: 558 PLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMD----MITYAMKYFDVNI 613
               +    + E      +    +     D    L  A  + D     +           
Sbjct: 128 AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP 187

Query: 614 ENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE 673
           E   G TPLH+AV       ++ LL     D   +   G T L  A       L  +L  
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLRPNPILARLLRA 246

Query: 674 ANADVN 679
             A   
Sbjct: 247 HGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  105 bits (261), Expect = 1e-25
 Identities = 53/263 (20%), Positives = 84/263 (31%), Gaps = 25/263 (9%)

Query: 618 GETPLHVAVSHGCLEAVKFLLN--TKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEAN 675
           G+T LH+AV H     + FLL     +  ++ +   G TAL  A        VE L  A 
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 676 ADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCND 735
           A V + +           +  +     +L++                         D +D
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPR------------------DASD 110

Query: 736 IARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSS 795
                 ++C  D +        A   +      +            +  +    +PL  +
Sbjct: 111 TYLTQSQDCTPDTSHA-----PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165

Query: 796 CRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG 855
                 E+V  L +  AD N      G T LH A       +++LLLK  AD  A    G
Sbjct: 166 VIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGG 225

Query: 856 KIAFHSACQAKNWDIVTFLLDAG 878
           +    SA    N  +   L   G
Sbjct: 226 RTPLGSALLRPNPILARLLRAHG 248

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 97.9 bits (242), Expect = 4e-23
 Identities = 46/270 (17%), Positives = 76/270 (28%), Gaps = 29/270 (10%)

Query: 552 DNKGCTPLHCAIVGNQLEVFNHLINSNADITM-----YKNDSPLHLACATGNMDMITYAM 606
              G T LH A++       + L+  +A             + LHLA   G    +    
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 607 KYFDVN-IENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRL 665
                  +    G T LH+A           LL                           
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQ-------------------PRPSHPR 106

Query: 666 DLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLH 725
           D  +  L  + D    D ++ P       +P  +       +   +       Y      
Sbjct: 107 DASDTYLTQSQDCT-PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE---AENYDGHTPL 162

Query: 726 YASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD 785
           + +      ++ R L +             RT L+ A       +L+ LLKAGADP    
Sbjct: 163 HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM 222

Query: 786 LKDTSPLLSSCRQGLYEIVDTLLEYNADTN 815
               +PL S+  +    +   L  + A   
Sbjct: 223 YGGRTPLGSALLRPNPILARLLRAHGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.6 bits (231), Expect = 1e-21
 Identities = 43/245 (17%), Positives = 76/245 (31%), Gaps = 21/245 (8%)

Query: 357 NDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP----EGERTALHMASQFGNLEMVNYLL 412
            +DG T L  A+        ++L+             +  +TALH+A+  G    V  L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 413 KHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDG-------------- 458
                    + G            +      +++          D               
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125

Query: 459 TTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVA 517
             A   +                + + +EN  G TP++ A+ +   E+  LL   GAD+ 
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN 185

Query: 518 V-KMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLI 575
             +     T LH+A E  +  ++  LL        +   G TPL  A++     +   L 
Sbjct: 186 KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245

Query: 576 NSNAD 580
              A 
Sbjct: 246 AHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 71.3 bits (173), Expect = 4e-14
 Identities = 38/259 (14%), Positives = 69/259 (26%), Gaps = 48/259 (18%)

Query: 646 NHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLV 705
            + T+DG TAL  A   +    ++ LL  +A                             
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE-------------------------- 36

Query: 706 KYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFG 765
                ++L N+     T LH A+  G+ + + +       A + +      TAL+ A   
Sbjct: 37  ----YLDLQND--LGQTALHLAAILGEASTVEKL--YAAGAGVLVAERGGHTALHLACRV 88

Query: 766 NNLDLLKFLLKAGADPDI--------------LDLKDTSPLLSSCRQGLYEIVDTLLEYN 811
                   LL+                      D       + S      E      ++ 
Sbjct: 89  RAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWR 148

Query: 812 ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV 871
                      +         +   +  L          E   G+   H A +A+   ++
Sbjct: 149 LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVL 208

Query: 872 TFLLDAGSNIEKATKYRMT 890
             LL AG++         T
Sbjct: 209 ELLLKAGADPTARMYGGRT 227

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.7 bits (161), Expect = 1e-12
 Identities = 43/187 (22%), Positives = 70/187 (37%), Gaps = 5/187 (2%)

Query: 205 HPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETD---TP 261
               ++   G+ AL  A + +    A +L+              L  S+           
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128

Query: 262 LHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVN 321
              +  N + E      +     L  E     T LHVA I +  ++V+LL D GA+ +  
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQ-LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP 187

Query: 322 VQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN 381
                G TPLH+A   +   ++++LL  GAD  +    G TPL  A+ +    +   L  
Sbjct: 188 EPTC-GRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246

Query: 382 HGCDLSV 388
           HG     
Sbjct: 247 HGAPEPE 253

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 30/167 (17%), Positives = 50/167 (29%), Gaps = 31/167 (18%)

Query: 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
           +  TAL+ A    +   L FLL   A  + LDL++                         
Sbjct: 8   DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQN------------------------- 42

Query: 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTF 873
                   G TALH AA   +   ++ L    A +   ++ G  A H AC+ +       
Sbjct: 43  ------DLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACV 96

Query: 874 LLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYVDKNIMVQFL 920
           LL    +  +        +S            A +   +     +  
Sbjct: 97  LLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPR 143

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (118), Expect = 5e-07
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           TPLH A+      +++LLL+ GA+P A      RT L  A +  +  + +LL  +GA + 
Sbjct: 194 TPLHLAVEAQAASVLELLLKAGADPTARMY-GGRTPLGSALLRPNPILARLLRAHGAPEP 252

Query: 320 VN 321
            +
Sbjct: 253 ED 254

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  113 bits (283), Expect = 3e-28
 Identities = 53/237 (22%), Positives = 91/237 (38%), Gaps = 9/237 (3%)

Query: 329 TPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV 388
                AC     E V  LL++GADIN  N DG T L  A   + +++  +LV +G +++ 
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ 101

Query: 389 PEGERTALHMASQFGNLEMVNYLLKHININH--QDKDGWTPLTCSIKGQASLEVFHSIIE 446
           P+ E      A+       +   L     +    + +G TPL  + +      + + +  
Sbjct: 102 PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161

Query: 447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIF 506
            G DI+A   +              A       HI+       G T ++ A    + E+ 
Sbjct: 162 QGVDIEAARKEEE------RIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVL 215

Query: 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCA 562
            LL++   DV +K    +T LH A  +   E    L+ +   +   +  G T    A
Sbjct: 216 KLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  107 bits (267), Expect = 3e-26
 Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 12/263 (4%)

Query: 456 MDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGA 514
            D       AC  G+   V  L++   DIN  N  G T ++ A  ++++++   L++ GA
Sbjct: 38  FDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA 97

Query: 515 DVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNH 573
           ++       +  LH A     +++  +L+S    V   +++G TPL  A      E+  +
Sbjct: 98  NINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQN 157

Query: 574 LINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEA 633
            +N               +               + +       G T LHVA + G  E 
Sbjct: 158 EVNRQGVDIEAARKEEERIML---RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEV 214

Query: 634 VKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTAL 692
           +K L      DVN K  DG T L  A +  + +   IL+E   D+   +    T    A 
Sbjct: 215 LKLL-IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA- 272

Query: 693 MKDPSLDIIKMLVKYGADVNLTN 715
                 DI+  L +     NL +
Sbjct: 273 ----DEDILGYLEELQKKQNLLH 291

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  102 bits (253), Expect = 2e-24
 Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 16/259 (6%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
                  A S G  E V  LL  +  D+N+   DG TAL  AC D  +D+V+ L+E  A+
Sbjct: 40  DGAVFLAACSSGDTEEVLRLLE-RGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98

Query: 678 VNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIA 737
           +N  D        A      LDI + L+  GA V   N            +      ++ 
Sbjct: 99  INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTP---LDIAEEEAMEELL 155

Query: 738 RFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCR 797
           +  V     DI          +   A        ++L     +         + L  +  
Sbjct: 156 QNEVNRQGVDIEAARKEEERIMLRDAR-------QWLNSGHINDVRHAKSGGTALHVAAA 208

Query: 798 QGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKI 857
           +G  E++  L++   D N++    G T LH AA   + +  ++L++   D+ A +K G+ 
Sbjct: 209 KGYTEVLKLLIQARYDVNIK-DYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267

Query: 858 AFHSACQAKNWDIVTFLLD 876
           AF  A +    DI+ +L +
Sbjct: 268 AFDVADE----DILGYLEE 282

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 97.1 bits (240), Expect = 1e-22
 Identities = 71/266 (26%), Positives = 109/266 (40%), Gaps = 13/266 (4%)

Query: 250 NYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVK 309
             ++   +      +A  + D E V  LLE+GA+          TALH A I ++VD+VK
Sbjct: 32  KKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVD-GLTALHQACIDDNVDMVK 90

Query: 310 LLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA 369
            L + GA  +          PLH A     L+I + L+ +GA + + N +G TPL  A  
Sbjct: 91  FLVENGANINQPDNEGW--IPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE 148

Query: 370 QNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLT 429
           +   E+    VN          +     M               HIN     K G T L 
Sbjct: 149 EAMEELLQNEVNRQGVDIEAARKEEERIMLRDA----RQWLNSGHINDVRHAKSGGTALH 204

Query: 430 CSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSEND 488
            +   +   EV   +I+A  D+  K  DG T LH A ++G       LV++  D+ + N 
Sbjct: 205 VAAA-KGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK 263

Query: 489 LGKTPIYFAIKNNHLEIFNLLLKLGA 514
           +G+T    A ++    I   L +L  
Sbjct: 264 VGQTAFDVADED----ILGYLEELQK 285

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 81.3 bits (199), Expect = 2e-17
 Identities = 47/241 (19%), Positives = 81/241 (33%), Gaps = 13/241 (5%)

Query: 651 DGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGA 709
           D       AC     + V  LLE  AD+N  +    T L+ A + D        +VK+  
Sbjct: 39  DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDN-----VDMVKFLV 93

Query: 710 DVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLD 769
           +             +   +            +    A +   N    T L+ A      +
Sbjct: 94  ENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEE 153

Query: 770 LLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTA 829
           LL+  +           K+         + +       L      ++R  K G TALH A
Sbjct: 154 LLQNEVNRQGVDIEAARKE-------EERIMLRDARQWLNSGHINDVRHAKSGGTALHVA 206

Query: 830 AFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRM 889
           A     +++KLL++   D+N +D  G    H+A      +    L++   ++E   K   
Sbjct: 207 AAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ 266

Query: 890 T 890
           T
Sbjct: 267 T 267

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 70.9 bits (172), Expect = 8e-14
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 8/104 (7%)

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
                 +G T LH+A  +   E++K+L+    D+N  + DG TPL  A      E    L
Sbjct: 192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251

Query: 380 VNHGCDLSVPEGE-RTALHMASQFGNLEMVNYL---LKHININH 419
           V + CD+       +TA  +A +    +++ YL    K  N+ H
Sbjct: 252 VENLCDMEAVNKVGQTAFDVADE----DILGYLEELQKKQNLLH 291

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 48.6 bits (114), Expect = 2e-06
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 1/118 (0%)

Query: 752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYN 811
            F++      A    + + +  LL+ GAD +  ++   + L  +C       +   L  N
Sbjct: 37  KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDD-NVDMVKFLVEN 95

Query: 812 ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWD 869
                +    G   LH AA    LDI + L+   A + A +  G      A +    +
Sbjct: 96  GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEE 153

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.4 bits (111), Expect = 5e-06
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 16/107 (14%)

Query: 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIEL 273
           G  AL  A  +  T++ KLL+     +N+ D            +  TPLH+A      E 
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDY-----------DGWTPLHAAAHWGKEEA 247

Query: 274 VKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSV 320
            ++L+E   +  A+ K   +TA  VA      DI+  L +   ++++
Sbjct: 248 CRILVENLCDMEAVNK-VGQTAFDVAD----EDILGYLEELQKKQNL 289

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 46.3 bits (108), Expect = 1e-05
 Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 1/117 (0%)

Query: 784 LDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK 843
           +   D +  L++C  G  E V  LLE  AD N      G TALH A   + +D++K L++
Sbjct: 36  VKFDDGAVFLAACSSGDTEEVLRLLERGADINYAN-VDGLTALHQACIDDNVDMVKFLVE 94

Query: 844 YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKH 900
             A+IN  D  G I  H+A      DI  +L+  G+++        T       E  
Sbjct: 95  NGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM 151

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  113 bits (282), Expect = 5e-28
 Identities = 47/312 (15%), Positives = 101/312 (32%), Gaps = 30/312 (9%)

Query: 228 DIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAI 287
           D+    +   + +        +N + + ++ +  L   +     E+   L    +N  + 
Sbjct: 9   DLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSE 68

Query: 288 EKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILL 347
             S N+   HV+      ++     +     ++ V    G TPLH       LE+VK L+
Sbjct: 69  GGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDE-HGNTPLHWLTSIANLELVKHLV 127

Query: 348 DKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDL-----SVPEGERTALHMASQF 402
             G++   G++ G + L  A+                 L           RT LH     
Sbjct: 128 KHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIIT 187

Query: 403 GNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTAL 462
                                  T  + + K    + +   + +    I++   +  +  
Sbjct: 188 SG--------------------MTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP 227

Query: 463 HLACYFGNLAMVNYLVKH----IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAV 518
           +        +++  L         +N+++  G T +  A +  ++ I + LL  GAD  +
Sbjct: 228 NDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFI 287

Query: 519 KMKSNFTCLHVA 530
             KS    +   
Sbjct: 288 ANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 99.7 bits (247), Expect = 2e-23
 Identities = 41/267 (15%), Positives = 76/267 (28%), Gaps = 45/267 (16%)

Query: 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKT-KDGSTALFFACYDKRLDLV 668
           + N E                L+ V        +++N    + G+T L +      L+LV
Sbjct: 64  NRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELV 123

Query: 669 EILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYM-TPLHY 726
           + L++  ++   GD    + L  A+    + D                       T LH+
Sbjct: 124 KHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 183

Query: 727 ASYRGDCND-----------IARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLL 775
                               +  ++V++ N  I        +  N         +L+ L 
Sbjct: 184 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 243

Query: 776 KAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQL 835
                 ++L+ +D                                +G T L+ AA    +
Sbjct: 244 LKWIIANMLNAQD-------------------------------SNGDTCLNIAARLGNI 272

Query: 836 DIIKLLLKYNADINAEDKYGKIAFHSA 862
            I+  LL Y AD    +K G       
Sbjct: 273 SIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.5 bits (236), Expect = 5e-22
 Identities = 46/286 (16%), Positives = 92/286 (32%), Gaps = 32/286 (11%)

Query: 321 NVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCL-EVFNYL 379
           N Q +     L      +  E+   L +  ++ NS               + L EV +  
Sbjct: 33  NEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAF 92

Query: 380 VNHGCDLSVP--EGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQA 436
            N   +L++P  E   T LH  +   NLE+V +L+KH  N  + D  G + L  ++K   
Sbjct: 93  PNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 152

Query: 437 SLEVFH---SIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTP 493
           + +       +      +  +     T LH       +   +   K+             
Sbjct: 153 NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKY------------- 199

Query: 494 IYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH----IGVN 549
                    + +  ++ K    +        +  +         ++  L         +N
Sbjct: 200 ------YLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 253

Query: 550 LQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLA 593
            QD+ G T L+ A     + + + L++  AD  +       P+   
Sbjct: 254 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 92.4 bits (228), Expect = 6e-21
 Identities = 44/275 (16%), Positives = 95/275 (34%), Gaps = 29/275 (10%)

Query: 479 KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEM 538
             ++ N +    +  +   +     E+   L    ++   +  S+          + ++ 
Sbjct: 28  PVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQE 87

Query: 539 VSFLLSHIGVNLQ---DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLA 593
           V+    +  +NL    D  G TPLH       LE+  HL+   ++     N   S L  A
Sbjct: 88  VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA 147

Query: 594 CATGNMDMITYAMKYFD-----VNIENDIGETPLHVAVSHGCLEA------------VKF 636
             + N           D     + +E+ +  T LH  +    +              + +
Sbjct: 148 VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW 207

Query: 637 LLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILL---EANADVNLGDGT-YTPLYTAL 692
           ++  +N  +   T +  +       +++  ++E L         +N  D    T L  A 
Sbjct: 208 IVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 267

Query: 693 MKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYA 727
               ++ I+  L+ YGAD  + N+    + P+ + 
Sbjct: 268 RLG-NISIVDALLDYGADPFIANK--SGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 87.4 bits (215), Expect = 3e-19
 Identities = 39/196 (19%), Positives = 59/196 (30%), Gaps = 39/196 (19%)

Query: 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDK----------GVPLNYSRRIIETD-- 259
             G   L W       ++ K LV  G      D               NY     E    
Sbjct: 105 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLD 164

Query: 260 --------------TPLHSAILNSDIEL------------VKLLLEKGANPLAIEKSRNR 293
                         T LH  I+ S +              +  +++K   P+    +   
Sbjct: 165 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 224

Query: 294 TALHVAAIVESVDIVK-LLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
           +  +         I++ L   +     +N Q+  G T L+IA R   + IV  LLD GAD
Sbjct: 225 SKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 284

Query: 353 INSGNDDGCTPLFCAI 368
               N  G  P+    
Sbjct: 285 PFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.1 bits (157), Expect = 7e-12
 Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 1/114 (0%)

Query: 756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLK-DTSPLLSSCRQGLYEIVDTLLEYNADT 814
              L    F    ++   L    ++ +      +      S    L E+ D       + 
Sbjct: 40  EAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNL 99

Query: 815 NLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW 868
           N+   +HG+T LH       L+++K L+K+ ++    D  G+     A ++ N 
Sbjct: 100 NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNN 153

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.5 bits (127), Expect = 4e-08
 Identities = 19/128 (14%), Positives = 43/128 (33%), Gaps = 1/128 (0%)

Query: 765 GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGST 824
            + L ++K L     + +   +K  + L       + E+  +L   +++ N         
Sbjct: 16  SSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQ 75

Query: 825 ALHTAAFHNQLDIIKLLLKYNADINAE-DKYGKIAFHSACQAKNWDIVTFLLDAGSNIEK 883
             H +      ++         ++N   D++G    H      N ++V  L+  GSN   
Sbjct: 76  QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLY 135

Query: 884 ATKYRMTF 891
                 + 
Sbjct: 136 GDNMGESC 143

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 1e-25
 Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 6/224 (2%)

Query: 258 TDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAE 317
           ++  + +   +  +E +K  +    +        +RTALH A    +     + F     
Sbjct: 3   SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWAC--SAGHTEIVEFLLQLG 60

Query: 318 KSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFN 377
             VN ++ AG +PLHIA      EIVK LL KGA +N+ N +GCTPL  A ++N  E+  
Sbjct: 61  VPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAV 120

Query: 378 YLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYL-LKHININHQDKDGWTPLTCSIKGQ 435
            L+  G +       E TA+H A+  GNL+M++ L     + N QD +G TPL  +   +
Sbjct: 121 MLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEE 180

Query: 436 ASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK 479
             +E    ++  GA I  +  +  T L +A   G   ++  +V+
Sbjct: 181 -RVEEAKLLVSQGASIYIENKEEKTPLQVAKG-GLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 4e-25
 Identities = 44/217 (20%), Positives = 92/217 (42%), Gaps = 6/217 (2%)

Query: 364 LFCAIAQ--NCLEVFNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKHININHQ 420
           + C +A      E+   ++      +  + + RTALH A   G+ E+V +LL+     + 
Sbjct: 6   MVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 65

Query: 421 DKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH 480
             D               E+  +++  GA + A   +G T LH A       +   L++ 
Sbjct: 66  KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 125

Query: 481 -IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMV 539
             + ++++    T ++ A    +L++ ++LL   A   ++     T LH+AC+   +E  
Sbjct: 126 GANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEA 185

Query: 540 SFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLI 575
             L+S    + +++ +  TPL  A  G    +   ++
Sbjct: 186 KLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 1e-24
 Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 6/227 (2%)

Query: 617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANA 676
           +    +      G LE +K  +           +D  TAL +AC     ++VE LL+   
Sbjct: 2   VSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV 61

Query: 677 DVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI 736
            VN  D                +I+K L+  GA VN  N+     TPLHYA+ +   ++I
Sbjct: 62  PVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQ--NGCTPLHYAASKN-RHEI 118

Query: 737 ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSC 796
           A  L+ E  A+   ++    TA++ AA   NL ++  LL   A  +I D +  +PL  +C
Sbjct: 119 AVMLL-EGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLAC 177

Query: 797 RQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK 843
            +   E    L+   A   +   K   T L  A       I+K +++
Sbjct: 178 DEERVEEAKLLVSQGASIYIEN-KEEKTPLQVAKGGL-GLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.1 bits (243), Expect = 1e-23
 Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 8/218 (3%)

Query: 462 LHLACYFGNLAMVNYLV--KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVK 519
           +    Y G L  +   +          +   +T +++A    H EI   LL+LG  V  K
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 520 MKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSN 578
             + ++ LH+A      E+V  LL     VN  +  GCTPLH A   N+ E+   L+   
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126

Query: 579 ADITMYKND--SPLHLACATGNMDMITY-AMKYFDVNIENDIGETPLHVAVSHGCLEAVK 635
           A+     +   + +H A A GN+ MI          NI++  G TPLH+A     +E  K
Sbjct: 127 ANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 186

Query: 636 FLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLE 673
            L++ +   +  + K+  T L  A       +++ ++E
Sbjct: 187 LLVS-QGASIYIENKEEKTPLQVAKGG-LGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.0 bits (240), Expect = 3e-23
 Identities = 52/246 (21%), Positives = 87/246 (35%), Gaps = 34/246 (13%)

Query: 396 LHMASQFGNLEMVNYLL--KHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKA 453
           +   +  G LE +   +          D+D  T L  +     +  V   +         
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 454 KLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLG 513
                +     A    +  +   L K   +N+ N  G TP+++A   N  EI  +LL+ G
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126

Query: 514 ADVAVKMKSNFTCLHVACEFASIEMVSFL-LSHIGVNLQDNKGCTPLHCAIVGNQLEVFN 572
           A+   K     T +H A    +++M+  L       N+QD +G TPLH A    ++E   
Sbjct: 127 ANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 186

Query: 573 HLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLE 632
            L++  A                               + IEN   +TPL VA   G   
Sbjct: 187 LLVSQGA------------------------------SIYIENKEEKTPLQVA-KGGLGL 215

Query: 633 AVKFLL 638
            +K ++
Sbjct: 216 ILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (217), Expect = 3e-20
 Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 9/221 (4%)

Query: 559 LHCAIVGNQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAMKYFDVNIEND 616
            + A  G   E+   ++   +  T    D  + LH AC+ G+ +++ + ++      + D
Sbjct: 8   CNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 67

Query: 617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANA 676
                     +    + +   L  K   VN   ++G T L +A    R ++  +LLE  A
Sbjct: 68  DAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA 127

Query: 677 DVNLGDGT-YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCND 735
           + +  D    T ++ A  K   L +I +L+ Y A  N+ +      TPLH A       +
Sbjct: 128 NPDAKDHYEATAMHRAAAKGN-LKMIHILLYYKASTNIQD--TEGNTPLHLACDEERV-E 183

Query: 736 IARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK 776
            A+ LV    A I + N   +T L  A  G    +LK +++
Sbjct: 184 EAKLLV-SQGASIYIENKEEKTPLQVAK-GGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.7 bits (216), Expect = 6e-20
 Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 5/192 (2%)

Query: 699 DIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTA 758
           ++ + ++   +    T++     T LH+A   G    +      +    +  ++    + 
Sbjct: 18  ELKESILADKSLATRTDQ--DSRTALHWACSAGHTEIVEFL--LQLGVPVNDKDDAGWSP 73

Query: 759 LNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRT 818
           L+ AA     +++K LL  GA  + ++    +PL  +  +  +EI   LLE  A+ + + 
Sbjct: 74  LHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD 133

Query: 819 IKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878
             + +TA+H AA    L +I +LL Y A  N +D  G    H AC  +  +    L+  G
Sbjct: 134 -HYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQG 192

Query: 879 SNIEKATKYRMT 890
           ++I    K   T
Sbjct: 193 ASIYIENKEEKT 204

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (186), Expect = 5e-16
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 2/178 (1%)

Query: 724 LHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDI 783
           +   +Y G   ++   +     +  T  + ++RTAL++A    + ++++FLL+ G   + 
Sbjct: 7   VCNLAYSGKLEELKESI-LADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 65

Query: 784 LDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK 843
            D    SPL  +   G  EIV  LL   A  N    ++G T LH AA  N+ +I  +LL+
Sbjct: 66  KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVN-QNGCTPLHYAASKNRHEIAVMLLE 124

Query: 844 YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHV 901
             A+ +A+D Y   A H A    N  ++  LL   ++         T       E+ V
Sbjct: 125 GGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERV 182

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =   99 bits (247), Expect = 4e-24
 Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 11/224 (4%)

Query: 327 GLTPLHIACRRKCLEIVKILLD----KGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH 382
           G TPLHIA  +  L  V  L++     G +++  N+   TPL  A+      V   LV  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 383 GCDLSVPEGERTALHM-ASQFGNLEMVNYLLKH-----ININHQDKDGWTPLTCSIKGQA 436
           G      +         A +  +   +  LL       +++  ++ DG T L  ++  + 
Sbjct: 63  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122

Query: 437 SLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIY 495
              V   +          +  G + L  A    +L+MV  L++H  ++N++   G + ++
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 182

Query: 496 FAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMV 539
            A     L +   L++ GAD ++K   N T L VA     I+++
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (243), Expect = 1e-23
 Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 15/226 (6%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKH-----IDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
           DG T LH+A   GNL  V+ LV        +++  N+L +TP++ A+      +  LL+ 
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-----IGVNLQDNKGCTPLHCAIVGN 566
            GA      +   T  H+ACE  S   +  LL       + +  ++  G T LH A+   
Sbjct: 62  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121

Query: 567 QLEVFNHLINSNADITMYKNDS---PLHLACATGNMDMITYAMKYFDVNIENDI-GETPL 622
             E    L+   ADI      S   PL  A    ++ M+   +++          G + L
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181

Query: 623 HVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLV 668
           H A   G L  V+ L+     D + K     T L  A   + +D++
Sbjct: 182 HSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.8 bits (239), Expect = 4e-23
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 5/226 (2%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNT---KNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
           G+TPLH+AV  G L AV  L+N       +++       T L  A       +V +L+ A
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 675 NADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLH-YASYRGDC 733
            A     D           +  S   ++ L+   A   L  EA  Y      + +   +C
Sbjct: 63  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122

Query: 734 NDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLL 793
            +  + L+E       +   + R+ L  A   N+L +++ LL+ GA+ +      +S L 
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 182

Query: 794 SSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839
           S+  +GL  +V TL+   AD++L+   H  T L  A     +DI++
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKN-CHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.4 bits (230), Expect = 7e-22
 Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 11/223 (4%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEK--SVNVQNVAGLTPLHIACRRKCLEIVKILLDKG 350
            T LH+A +  ++  V  L +   +    +++ N    TPLH+A       +V++L+  G
Sbjct: 4   DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63

Query: 351 ADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG-----CDLSVPEGERTALHMASQFGNL 405
           A   + +  G T    A           L++          +      TALH+A      
Sbjct: 64  ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 123

Query: 406 EMVNYLLKHI--NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALH 463
           E V  LL+          K G +PL  +++  +   +   +++ GA++ A++  G++ALH
Sbjct: 124 ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL-SMVQLLLQHGANVNAQMYSGSSALH 182

Query: 464 LACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEI 505
            A   G L +V  LV+   D + +N    TP+  A     ++I
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.2 bits (214), Expect = 9e-20
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 12/225 (5%)

Query: 358 DDGCTPLFCAIAQNCLEVFNYLVN----HGCDLSVPEGE-RTALHMASQFGNLEMVNYLL 412
           +DG TPL  A+ Q  L   + LVN     G +L +     +T LH+A       +V  L+
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60

Query: 413 KHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGA----DIKAKLMDGTTALHLACYF 468
                                   S     +++++ A    D++A+  DG TALH+A   
Sbjct: 61  TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 120

Query: 469 GNLAMVNYLVKHI--DINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTC 526
                V  L++        +   G++P+  A++NN L +  LLL+ GA+V  +M S  + 
Sbjct: 121 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSA 180

Query: 527 LHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEV 570
           LH A     + +V  L+      +L++    TPL  A     +++
Sbjct: 181 LHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (206), Expect = 1e-18
 Identities = 51/253 (20%), Positives = 88/253 (34%), Gaps = 39/253 (15%)

Query: 393 RTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIK 452
            T LH+A   GNL  V+ L+                                 + G ++ 
Sbjct: 4   DTPLHIAVVQGNLPAVHRLVNLF-----------------------------QQGGRELD 34

Query: 453 AKLMDGTTALHLAC-YFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
                  T LHLA        +   +       + +  G+T  + A ++        LL 
Sbjct: 35  IYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLD 94

Query: 512 LGADVAVKMK----SNFTCLHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVG 565
             A   + ++       T LHVA      E V  LL        +    G +PL  A+  
Sbjct: 95  SAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN 154

Query: 566 NQLEVFNHLINSNADITMYKND--SPLHLACATGNMDMITYAMKY-FDVNIENDIGETPL 622
           N L +   L+   A++        S LH A   G + ++   ++   D +++N   +TPL
Sbjct: 155 NSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPL 214

Query: 623 HVAVSHGCLEAVK 635
            VA S   ++ ++
Sbjct: 215 MVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (204), Expect = 2e-18
 Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 14/219 (6%)

Query: 525 TCLHVACEFASIEMVSFLLSHIG-----VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNA 579
           T LH+A    ++  V  L++        +++ +N   TPLH A++     V   L+ + A
Sbjct: 5   TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64

Query: 580 --DITMYKNDSPLHLACATGNMDMITY-----AMKYFDVNIENDIGETPLHVAVSHGCLE 632
                     +  HLAC   +   +       A    D+   N  G T LHVAV+  C E
Sbjct: 65  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 124

Query: 633 AVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTAL 692
            V+ LL           K G + L  A  +  L +V++LL+  A+VN    + +    + 
Sbjct: 125 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSA 184

Query: 693 MKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRG 731
                L +++ LV+ GAD +L N  C+  TPL  A  R 
Sbjct: 185 SGRGLLPLVRTLVRSGADSSLKN--CHNDTPLMVARSRR 221

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (165), Expect = 2e-13
 Identities = 51/244 (20%), Positives = 87/244 (35%), Gaps = 37/244 (15%)

Query: 651 DGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGAD 710
           DG T L  A     L  V  L                             + +  + G +
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRL-----------------------------VNLFQQGGRE 32

Query: 711 VNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDL 770
           +++ N      TPLH A      + +   +    +     R+       + A    +   
Sbjct: 33  LDIYNN--LRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA--HLACEHRSPTC 88

Query: 771 LKFLLKAGADPDILDLKDT----SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTAL 826
           L+ LL + A   +          + L  +      E V  LLE  AD +   IK G + L
Sbjct: 89  LRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPL 148

Query: 827 HTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886
             A  +N L +++LLL++ A++NA+   G  A HSA       +V  L+ +G++      
Sbjct: 149 IHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC 208

Query: 887 YRMT 890
           +  T
Sbjct: 209 HNDT 212

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (155), Expect = 6e-12
 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 2/116 (1%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
           T LH A+     E V+LLLE+GA+  A++    R+ L  A    S+ +V+LL  +GA  +
Sbjct: 112 TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN 171

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375
             + +  G + LH A  R  L +V+ L+  GAD +  N    TPL  A ++  +++
Sbjct: 172 AQMYS--GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (131), Expect = 7e-09
 Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 3/84 (3%)

Query: 261 PLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSV 320
           PL  A+ N+ + +V+LLL+ GAN  A   S   +ALH A+    + +V+ L   GA+   
Sbjct: 147 PLIHAVENNSLSMVQLLLQHGANVNAQMYS-GSSALHSASGRGLLPLVRTLVRSGAD--S 203

Query: 321 NVQNVAGLTPLHIACRRKCLEIVK 344
           +++N    TPL +A  R+ ++I++
Sbjct: 204 SLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (98), Expect = 1e-04
 Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 11/89 (12%)

Query: 187 KALEEELTNIFKKFDLLEHPEYLSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKG 246
            A+E    ++ +               G  AL  A       + + LV  G   +L +  
Sbjct: 150 HAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC- 208

Query: 247 VPLNYSRRIIETDTPLHSAILNSDIELVK 275
                       DTPL  A     I++++
Sbjct: 209 ----------HNDTPLMVARSRRVIDILR 227

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 94.9 bits (234), Expect = 1e-22
 Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 4/206 (1%)

Query: 341 EIVKILLDKGADINSGND-DGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMA 399
           +++  LL +GA++N+  D  G T L  A      +    L++ G D +  +        A
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 400 SQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQA--SLEVFHSIIEAGADIKAKLMD 457
           +   +   V  +L      + +       T  I         +   +I A ADI A    
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 458 GTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV 516
           G TALH A    N   VN L+  H + ++++D  +TP++ A +    E    LL   A+ 
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182

Query: 517 AVKMKSNFTCLHVACEFASIEMVSFL 542
            +    +     VA E    ++V  L
Sbjct: 183 EITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 88.7 bits (218), Expect = 2e-20
 Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 4/208 (1%)

Query: 272 ELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPL 331
           +++  LL +GA   A       T+LH+AA     D  K L D GA+ +            
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 332 HIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG 391
            +A     +  + +  ++  ++N+   DG TPL  A       +   L+    D++  + 
Sbjct: 63  AVAADAMGVFQILL-RNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADN 121

Query: 392 E-RTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGA 449
             +TALH A+   N E VN LL  H N + QD    TPL  + +   S E   ++++  A
Sbjct: 122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREG-SYEASKALLDNFA 180

Query: 450 DIKAKLMDGTTALHLACYFGNLAMVNYL 477
           + +           +A    +  +V  L
Sbjct: 181 NREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 88.3 bits (217), Expect = 2e-20
 Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 8/211 (3%)

Query: 304 SVDIVKLLFDYGAEKSVNV-QNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCT 362
           +  ++  L   GAE  +N   +  G T LH+A R    +  K LLD GAD NS ++ G T
Sbjct: 1   TAQVISDLLAQGAE--LNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRT 58

Query: 363 PLFCAIAQNCLEVFNYLVN--HGCDLSVPEGERTALHMASQFGNLEMVNYLLKH-ININH 419
           PL  A+A + + VF  L+        +      T L +A++     MV  L+    +IN 
Sbjct: 59  PLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINA 118

Query: 420 QDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK 479
            D  G T L  +     +  V   ++   A+  A+     T L LA   G+      L+ 
Sbjct: 119 ADNSGKTALHWAAAVNNTEAVNILLMH-HANRDAQDDKDETPLFLAAREGSYEASKALLD 177

Query: 480 H-IDINSENDLGKTPIYFAIKNNHLEIFNLL 509
           +  +    + + + P   A +  H +I  LL
Sbjct: 178 NFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 87.5 bits (215), Expect = 5e-20
 Identities = 47/212 (22%), Positives = 76/212 (35%), Gaps = 10/212 (4%)

Query: 535 SIEMVSFLLSHIGVNL---QDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLH 591
           + +++S LL+  G  L    D  G T LH A    + +    L+++ AD     N     
Sbjct: 1   TAQVISDLLAQ-GAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTP 59

Query: 592 LACAT---GNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHK 648
           L  A                           T   +  +   +E +   L T + D+N  
Sbjct: 60  LHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAA 119

Query: 649 TKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYG 708
              G TAL +A      + V ILL  +A+ +  D           ++ S +  K L+   
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179

Query: 709 ADVNLTNEACYYMTPLHYASYRGDCNDIARFL 740
           A+  +T+       P   AS R   +DI R L
Sbjct: 180 ANREITDH--MDRLPRDVASERLH-HDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 84.8 bits (208), Expect = 4e-19
 Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 5/206 (2%)

Query: 374 EVFNYLVNHGCDLSVPEGE--RTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCS 431
           +V + L+  G +L+    +   T+LH+A++F   +    LL      +   +       +
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 432 IK--GQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDL 489
                   +        A           T  +  A       + + +    DIN+ ++ 
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 490 GKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGV 548
           GKT +++A   N+ E  N+LL   A+   +   + T L +A    S E    LL +    
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182

Query: 549 NLQDNKGCTPLHCAIVGNQLEVFNHL 574
            + D+    P   A      ++   L
Sbjct: 183 EITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 80.2 bits (196), Expect = 1e-17
 Identities = 42/208 (20%), Positives = 75/208 (36%), Gaps = 9/208 (4%)

Query: 504 EIFNLLLKLGADVAVKM-KSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCA 562
           ++ + LL  GA++   M K+  T LH+A  FA  +    LL         +        A
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 563 IVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYF-----DVNIENDI 617
            V         ++  N    +                  I   ++       D+N  ++ 
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
           G+T LH A +    EAV   L   + + + +     T LF A  +   +  + LL+  A+
Sbjct: 123 GKTALHWAAAVNNTEAVNI-LLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN 181

Query: 678 VNLGDGT-YTPLYTALMKDPSLDIIKML 704
             + D     P   A  +    DI+++L
Sbjct: 182 REITDHMDRLPRDVASERL-HHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 79.1 bits (193), Expect = 4e-17
 Identities = 47/210 (22%), Positives = 77/210 (36%), Gaps = 7/210 (3%)

Query: 667 LVEILLEANADVNLGDGTY--TPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPL 724
           ++  LL   A++N        T L+ A       D  K L+  GAD N  +         
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFA-RADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 725 HYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDIL 784
             A+       I          ++  R  +  T L  AA      +++ L+ A AD +  
Sbjct: 63  AVAADAMGVFQILLR---NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAA 119

Query: 785 DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKY 844
           D    + L  +      E V+ LL ++A+ + +  K   T L  AA     +  K LL  
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKD-ETPLFLAAREGSYEASKALLDN 178

Query: 845 NADINAEDKYGKIAFHSACQAKNWDIVTFL 874
            A+    D   ++    A +  + DIV  L
Sbjct: 179 FANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 67.9 bits (164), Expect = 3e-13
 Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 3/194 (1%)

Query: 697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNR 756
           +  +I  L+  GA++N T +     T LH A+      D A+ L++      +  N    
Sbjct: 1   TAQVISDLLAQGAELNATMDK-TGETSLHLAARFARA-DAAKRLLDAGADANSQDNTGRT 58

Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
                 A          L     + +      T+PL+ + R  +  +V+ L+  +AD N 
Sbjct: 59  PLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINA 118

Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD 876
                G TALH AA  N  + + +LL ++A+ +A+D   +     A +  +++    LLD
Sbjct: 119 AD-NSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLD 177

Query: 877 AGSNIEKATKYRMT 890
             +N E        
Sbjct: 178 NFANREITDHMDRL 191

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 45.2 bits (105), Expect = 1e-05
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 250 NYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVK 309
           N   +  + +TPL  A      E  K LL+  AN    +   +R    VA+     DIV+
Sbjct: 148 NRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHM-DRLPRDVASERLHHDIVR 206

Query: 310 LL 311
           LL
Sbjct: 207 LL 208

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.7 bits (236), Expect = 1e-22
 Identities = 48/230 (20%), Positives = 85/230 (36%), Gaps = 15/230 (6%)

Query: 460 TALHLACYFGNLAMVNYLVKH--IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADV- 516
             LH AC       V  L+      +  ++  G+ P+++++     EI + LL    +V 
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 517 -----AVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVF 571
                     + F           ++ +        +N   N+G T LH A+     EV 
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 572 NHLINSNADITM--YKNDSPLHLACATGNMDMITYAMKY--FDVNIENDIGETPLHVAVS 627
             LI + A + +    N  PLH A + G++ +I          VN ++  G TPL  A++
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 628 HGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
            G  +A   L+     + +     G+ A   A       + +  L    D
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 91.0 bits (224), Expect = 4e-21
 Identities = 51/262 (19%), Positives = 82/262 (31%), Gaps = 36/262 (13%)

Query: 620 TPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN 679
            PLH A        V+ LL++K   +  K +DG   L ++   +  +             
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHE------------- 48

Query: 680 LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARF 739
                                  +L K               TP H A   G+   +   
Sbjct: 49  -------------------ITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSL 89

Query: 740 LVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG 799
                  D+        T L+ A      ++ +FL++ GA   I D  +  PL  +   G
Sbjct: 90  YDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG 149

Query: 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLL-KYNADINAEDKYGKIA 858
             ++++ L            K G T L  A      D   LL+ KY A+ +  D  G  A
Sbjct: 150 SLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKA 209

Query: 859 FHSACQAKNWDIVTFLLDAGSN 880
              A    N  +  F L+   +
Sbjct: 210 EDVAL---NEQVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.2 bits (201), Expect = 5e-18
 Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 9/228 (3%)

Query: 259 DTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK 318
           + PLH A + ++   V+ LL    + L  +    R  LH +   ++ +I   L       
Sbjct: 1   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60

Query: 319 SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGC---TPLFCAIAQNCLEV 375
           +++                     V   L         N       T L  A+ +   EV
Sbjct: 61  NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120

Query: 376 FNYLVNHGCDLSVPEGE-RTALHMASQFGNLEMVNYLLKH--ININHQDKDGWTPLTCSI 432
             +L+ +G  + + +   +  LH A+  G+L+++  L       +N QDK GWTPL  ++
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL 180

Query: 433 KGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH 480
                      + + GA+       G  A  +A    N  +  + + +
Sbjct: 181 AEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNN 225

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.2 bits (170), Expect = 5e-14
 Identities = 43/234 (18%), Positives = 79/234 (33%), Gaps = 13/234 (5%)

Query: 587 DSPLHLACATGNMDMITYAMKYF--DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNID 644
           + PLH AC       +   +      +  ++  G  PLH +VS    E   FLL+     
Sbjct: 1   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60

Query: 645 VNHKTKDGSTALFFACYDKRLDLVEILLEANA----DVNLGDGTYTPLYTALMKDPSLDI 700
                 D S    F       +L  +    +     D+N             +     ++
Sbjct: 61  NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120

Query: 701 IKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALN 760
            + L++ GA V + +   +   PLH A+       +   L     + +  ++    T L 
Sbjct: 121 SQFLIENGASVRIKD--KFNQIPLHRAASV-GSLKLIELLCGLGKSAVNWQDKQGWTPLF 177

Query: 761 FAAFGNNLDLLKFLL-KAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813
            A    + D    L+ K GA+ D++D K       +  +   ++    L    D
Sbjct: 178 HALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.0 bits (133), Expect = 4e-09
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFD-YGAEK 318
            PLH A     ++L++LL   G + +  +  +  T L  A      D   LL + YGAE 
Sbjct: 140 IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE- 198

Query: 319 SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD 352
             ++ +  G     +A      ++ K  L+   D
Sbjct: 199 -YDLVDNKGAKAEDVALNE---QVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.8 bits (117), Expect = 4e-07
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 824 TALHTAAFHNQLDIIKLLLKYN-ADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882
             LH A   N+   ++ LL    + +  +D+ G+I  H +   +  +I +FLL    N+ 
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 883 KATKYRMTF 891
                  + 
Sbjct: 62  LDDYPDDSG 70

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.3 bits (227), Expect = 1e-21
 Identities = 40/210 (19%), Positives = 70/210 (33%), Gaps = 13/210 (6%)

Query: 327 GLTPLHIACRRK----CLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNH 382
           G + LH+A   +     +E+++ +    A +N  N+   TPL  A+  N  E+   L+  
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 383 GCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDK--------DGWTPLTCSIKG 434
           GCD  + +         +          +L                  +G T L  +   
Sbjct: 62  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121

Query: 435 QASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVN-YLVKHIDINSENDLGKTP 493
                V   +         +  +G TALHLA    N  +V+  L    D+N     G +P
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 181

Query: 494 IYFAIKNNHLEIFNLLLKLGADVAVKMKSN 523
                      I   L +L  +    +  +
Sbjct: 182 YQLTWGRPSTRIQQQLGQLTLENLQMLPES 211

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.5 bits (199), Expect = 8e-18
 Identities = 47/199 (23%), Positives = 74/199 (37%), Gaps = 12/199 (6%)

Query: 293 RTALHVAAIVESVDIVKLLFDYGAEK--SVNVQNVAGLTPLHIACRRKCLEIVKILLDKG 350
            + LH+A I E   +   +          +N QN    TPLH+A      EI + LL  G
Sbjct: 3   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62

Query: 351 ADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEG-------ERTALHMASQFG 403
            D    +  G TPL  A  Q CL     L        +            T LH+AS  G
Sbjct: 63  CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG 122

Query: 404 NLEMVNYLLKH--ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTA 461
            L +V  L+         +  +G T L  ++  Q + ++   +++ GAD+      G + 
Sbjct: 123 YLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ-NPDLVSLLLKCGADVNRVTYQGYSP 181

Query: 462 LHLACYFGNLAMVNYLVKH 480
             L     +  +   L + 
Sbjct: 182 YQLTWGRPSTRIQQQLGQL 200

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.8 bits (192), Expect = 7e-17
 Identities = 52/228 (22%), Positives = 83/228 (36%), Gaps = 32/228 (14%)

Query: 457 DGTTALHLACYFGNLAMVNYLVKHI-----DINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
           DG + LHLA      A+   +++ +      +N +N+L +TP++ A+  N  EI   LL 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVF 571
            G D  ++     T LH+ACE   +  V  L                             
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSC------------------------T 96

Query: 572 NHLINSNADITMYKNDSPLHLACATGNMDMITYAMKY--FDVNIENDIGETPLHVAVSHG 629
              ++S    T Y   + LHLA   G + ++   +         E   G T LH+AV   
Sbjct: 97  TPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 156

Query: 630 CLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
             + V  LL     DVN  T  G +            + + L +   +
Sbjct: 157 NPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (179), Expect = 3e-15
 Identities = 42/246 (17%), Positives = 72/246 (29%), Gaps = 42/246 (17%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNT---KNIDVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
           G++ LH+A+ H        ++         +N +     T L  A    + ++ E LL A
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 675 NADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMT----PLHYASYR 730
             D  L D           +   L  + +L +     +L +            LH AS  
Sbjct: 62  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121

Query: 731 GDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTS 790
           G    +   +    + +      N RTAL+ A    N DL+  LLK GAD + +      
Sbjct: 122 GYLGIVELLVSLGADVNAQ-EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT----- 175

Query: 791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINA 850
                                          G +            I + L +   +   
Sbjct: 176 -----------------------------YQGYSPYQLTWGRPSTRIQQQLGQLTLENLQ 206

Query: 851 EDKYGK 856
                +
Sbjct: 207 MLPESE 212

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (175), Expect = 9e-15
 Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 16/201 (7%)

Query: 525 TCLHVACEFASIEMVSFLLSHIG-----VNLQDNKGCTPLHCAI---------VGNQLEV 570
           + LH+A       +   ++  +      +N Q+N   TPLH A+                
Sbjct: 4   SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63

Query: 571 FNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGC 630
              L +   +  ++       LA         T    +  +   N  G T LH+A  HG 
Sbjct: 64  DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 123

Query: 631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT-YTPLY 689
           L  V+ L++        +  +G TAL  A   +  DLV +LL+  ADVN      Y+P  
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 183

Query: 690 TALMKDPSLDIIKMLVKYGAD 710
               +  S  I + L +   +
Sbjct: 184 LTWGRP-STRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (172), Expect = 3e-14
 Identities = 43/212 (20%), Positives = 72/212 (33%), Gaps = 10/212 (4%)

Query: 682 DGTYTPLYTALM---KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIAR 738
           DG  + L+ A++   K  ++++I+ +    A +N  N      TPLH A           
Sbjct: 1   DG-DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN--LQQTPLHLAVITNQPEIAEA 57

Query: 739 FLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKA----GADPDILDLKDTSPLLS 794
            L   C+ ++     N    L           +           +     +    + L  
Sbjct: 58  LLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHL 117

Query: 795 SCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKY 854
           +   G   IV+ L+   AD N +   +G TALH A      D++ LLLK  AD+N     
Sbjct: 118 ASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ 177

Query: 855 GKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886
           G   +       +  I   L        +   
Sbjct: 178 GYSPYQLTWGRPSTRIQQQLGQLTLENLQMLP 209

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (168), Expect = 1e-13
 Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 15/213 (7%)

Query: 587 DSPLHLACATGNMDMITYAMKYF-----DVNIENDIGETPLHVAVSHGCLEAVKFLLNTK 641
           DS LHLA       +    ++        +N +N++ +TPLH+AV     E  + LL   
Sbjct: 3   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62

Query: 642 NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDP----- 696
                   +  +     AC    L  V +L ++    +L        Y            
Sbjct: 63  CDPELRDFRGNTPL-HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121

Query: 697 -SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNN 755
             L I+++LV  GADVN   E C   T LH A    + + ++  L  +C AD+    +  
Sbjct: 122 GYLGIVELLVSLGADVN-AQEPCNGRTALHLAVDLQNPDLVSLLL--KCGADVNRVTYQG 178

Query: 756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKD 788
            +         +  + + L +   +   +  + 
Sbjct: 179 YSPYQLTWGRPSTRIQQQLGQLTLENLQMLPES 211

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (134), Expect = 3e-09
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)

Query: 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA 351
             T LH+A+I   + IV+LL   GA+     +   G T LH+A   +  ++V +LL  GA
Sbjct: 111 GHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA 169

Query: 352 DINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385
           D+N     G +P      +    +   L     +
Sbjct: 170 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 6e-05
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 259 DTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK 318
            T LH A+   + +LV LLL+ GA+   +      +   +     S  I + L     E 
Sbjct: 146 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ-GYSPYQLTWGRPSTRIQQQLGQLTLEN 204

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (184), Expect = 2e-16
 Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 4/155 (2%)

Query: 329 TPLHIACRRKCLEIVKILLDK-GADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLS 387
             L  A  R  ++ V+ LL +     ++ N  G T L   +  +       L        
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63

Query: 388 VPEGERTALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIE 446
                 + +H A++ G L+ +  L++H  ++N  D  G  P+  +++         S + 
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGH--TAVVSFLA 121

Query: 447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHI 481
           A +D+  +   G T L LA   G   +V+ L  H+
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQGHM 156

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (148), Expect = 1e-11
 Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 4/155 (2%)

Query: 394 TALHMASQFGNLEMVNYLL--KHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI 451
             L  A+  G+++ V  LL  + ++ +  ++ G T L   + G  ++ +      A  ++
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63

Query: 452 KAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLK 511
           +               F +   V       D+N  +  G  PI+ A++  H  + + L  
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVEHGA-DVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122

Query: 512 LGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHI 546
             +D+  +     T L +A +  + ++V  L  H+
Sbjct: 123 -ESDLHRRDARGLTPLELALQRGAQDLVDILQGHM 156

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (146), Expect = 2e-11
 Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 33/182 (18%)

Query: 460 TALHLACYFGNLAMVNYLV--KHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVA 517
             L  A   G++  V  L+  + +  ++ N  GKT +   +  +      LL +  +   
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63

Query: 518 VKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINS 577
                       A       +   +     VN+ D  G  P+H A               
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLA--------------- 108

Query: 578 NADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFL 637
                              G+  ++++     D++  +  G TPL +A+  G  + V  L
Sbjct: 109 ----------------VQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDIL 152

Query: 638 LN 639
             
Sbjct: 153 QG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (143), Expect = 5e-11
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 6/158 (3%)

Query: 618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANAD 677
               L  A + G ++ V+ LL+ + +  +   + G TAL    +     +   LL+  A 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGST-AIALELLKQGAS 60

Query: 678 VNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIA 737
            N+ D + T       +   LD +K+LV++GADVN+ +       P+H A   G    ++
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPD--GTGALPIHLAVQEGHTAVVS 118

Query: 738 RFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLL 775
                   +D+  R+    T L  A      DL+  L 
Sbjct: 119 FL---AAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (139), Expect = 2e-10
 Identities = 33/151 (21%), Positives = 51/151 (33%), Gaps = 6/151 (3%)

Query: 527 LHVACEFASIEMVSFLLSHIG--VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMY 584
           L  A     ++ V  LL       +  +  G T L   + G+       L    +     
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 65

Query: 585 KNDSPLHLACATGNMDMITYAMKYF--DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKN 642
            + +      A          +     DVN+ +  G  P+H+AV  G    V FL     
Sbjct: 66  TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA--AE 123

Query: 643 IDVNHKTKDGSTALFFACYDKRLDLVEILLE 673
            D++ +   G T L  A      DLV+IL  
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (134), Expect = 7e-10
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 5/157 (3%)

Query: 260 TPLHSAILNSDIELVKLLLEK-GANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK 318
             L  A    D++ V+ LL +   +P     + NR       ++        L       
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHP----DALNRFGKTALQVMMFGSTAIALELLKQGA 59

Query: 319 SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNY 378
           S NVQ+ +G +P+H A R   L+ +K+L++ GAD+N  +  G  P+  A+ +    V ++
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 379 LVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI 415
           L              T L +A Q G  ++V+ L  H+
Sbjct: 120 LAAESDLHRRDARGLTPLELALQRGAQDLVDILQGHM 156

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (108), Expect = 2e-06
 Identities = 27/155 (17%), Positives = 46/155 (29%), Gaps = 4/155 (2%)

Query: 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
             L  A+ RGD     R L+          N   +TAL    FG+        L      
Sbjct: 4   DRLSGAAARGDV-QEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAI--ALELLKQGAS 60

Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
             +     +  +    +  +     +L  +          G+  +H A       ++  L
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD 876
               +D++  D  G      A Q    D+V  L  
Sbjct: 121 AAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (94), Expect = 2e-04
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 7/157 (4%)

Query: 686 TPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN 745
             L  A  +    ++ ++L +     +  N        +          ++ +       
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63

Query: 746 ADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVD 805
                ++ +  + ++ AA    LD LK L++ GAD ++ D    +  +    Q  +  V 
Sbjct: 64  -----QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPD-GTGALPIHLAVQEGHTAVV 117

Query: 806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLL 842
           + L   +D + R    G T L  A      D++ +L 
Sbjct: 118 SFLAAESDLHRRD-ARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (86), Expect = 0.002
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 822 GSTALHTAAFHNQLDIIKLLL-KYNADINAEDKYGKIAFHSACQAKNW 868
               L  AA    +  ++ LL +     +A +++GK A          
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTA 49

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (183), Expect = 3e-16
 Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 1/153 (0%)

Query: 329 TPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV 388
             L  A  R  LE +  LL    ++N+ N  G T L      N       L+        
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 389 PEGERTALHMASQFGNLEMVNYLLK-HININHQDKDGWTPLTCSIKGQASLEVFHSIIEA 447
                  +H A++ G L+ +  LL+   ++N +D +G  PL  + K      V   +   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVKH 480
            +++  +   G TA  LA  +G   +V+ +  +
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (149), Expect = 8e-12
 Identities = 32/151 (21%), Positives = 50/151 (33%), Gaps = 4/151 (2%)

Query: 492 TPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNLQ 551
             +  A     LE    LL+   +V  +     T L V            LL     +L+
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 552 DNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGN----MDMITYAMK 607
           D  G   +H A     L+    L+   AD+ +  N+  L L  A       +        
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 608 YFDVNIENDIGETPLHVAVSHGCLEAVKFLL 638
             +V   N  G+T   +A  +G  E V  + 
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 153

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (147), Expect = 1e-11
 Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 1/153 (0%)

Query: 394 TALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIK 452
             L  A+  G+LE +  LL++ +N+N Q+  G T L     G   +     +  A  D+K
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 453 AKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKL 512
            +             F +        +      +N+        A + +   +  L+   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 513 GADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545
            ++V  +     T   +A  +   E+VS + ++
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (140), Expect = 1e-10
 Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 3/151 (1%)

Query: 527 LHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYK 585
           L  A     +E ++ LL + + VN Q+  G T L    +GN       L+         +
Sbjct: 5   LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDR 64

Query: 586 NDSPLHLACATGNMDMITYAMK--YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNI 643
               +    A          +     DVNIE++ G  PLH+A   G L  V+FL+     
Sbjct: 65  TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 124

Query: 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEA 674
           +V H+   G TA   A    R ++V ++   
Sbjct: 125 NVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (134), Expect = 7e-10
 Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 5/159 (3%)

Query: 620 TPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVN 679
             L  A + G LE +  LL   N++VN +   G TAL             +         
Sbjct: 3   NELASAAARGDLEQLTSLLQ-NNVNVNAQNGFGRTALQVMKLGNPEIARRL----LLRGA 57

Query: 680 LGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARF 739
             D      +  +        +  L          N          + + +     +  F
Sbjct: 58  NPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEF 117

Query: 740 LVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG 778
           LV+   +++  RN    TA + A      +++  +   G
Sbjct: 118 LVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (124), Expect = 2e-08
 Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 6/157 (3%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             L SA    D+E +  LL+   N  A           +      +    LL       +
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGA----N 58

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
            ++++  G   +H A R   L+ ++ LL+  AD+N  +++G  PL  A  +  L V  +L
Sbjct: 59  PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118

Query: 380 VNHGCDLSVPEGE--RTALHMASQFGNLEMVNYLLKH 414
           V H             TA  +A  +G  E+V+ +  +
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 5e-07
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW 868
             L +AA    L+ +  LL+ N ++NA++ +G+ A          
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPE 47

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (112), Expect = 7e-07
 Identities = 29/159 (18%), Positives = 60/159 (37%), Gaps = 6/159 (3%)

Query: 686 TPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN 745
             L +A  +   L+ +  L++   +VN  N        +           +         
Sbjct: 3   NELASAAARG-DLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL 61

Query: 746 ADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVD 805
                ++      ++ AA    LD L+ LL+  AD +I D +   PL  + ++G   +V+
Sbjct: 62  -----KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 116

Query: 806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKY 844
            L+++ A         G TA   A  + + +++ L+   
Sbjct: 117 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (108), Expect = 2e-06
 Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 3/159 (1%)

Query: 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA 779
           +   L  A+ RGD  +    L++  N ++  +N   RTAL     GN     + LL  GA
Sbjct: 1   WGNELASAAARGDL-EQLTSLLQ-NNVNVNAQNGFGRTALQVMKLGNPEIA-RRLLLRGA 57

Query: 780 DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839
           +PD+ D    + +  + R G  + + TLLE+ AD N+   +        A   +   +  
Sbjct: 58  NPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEF 117

Query: 840 LLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878
           L+    +++   +  G  A   A      ++V+ +   G
Sbjct: 118 LVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (97), Expect = 6e-05
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKG 350
           V  +N  G T   +A      E+V ++   G
Sbjct: 126 VGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.0 bits (177), Expect = 1e-15
 Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 4/153 (2%)

Query: 488 DLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSHIG 547
           DLG   +  A +    +   +L+  GA               A           L + + 
Sbjct: 1   DLG-KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 548 VNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMIT---Y 604
            + +     TPLH A       +   L+   AD+          L  AT +         
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 605 AMKYFDVNIENDIGETPLHVAVSHGCLEAVKFL 637
                DV+ ++   +T   +++ +G  +  + L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.2 bits (175), Expect = 2e-15
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 1/152 (0%)

Query: 359 DGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININ 418
           D    L  A      +    L+ +G   +      + LH+A+Q+G+      LL+     
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 419 HQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNY-L 477
                           +    +   +++ GAD+ AK M   TALH A    +  +V   +
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 478 VKHIDINSENDLGKTPIYFAIKNNHLEIFNLL 509
               D+++++   KT    +I N + ++  +L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.3 bits (165), Expect = 5e-14
 Identities = 33/149 (22%), Positives = 52/149 (34%)

Query: 329 TPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV 388
             L  A R    + V+IL+  GA   +           A   +       L       + 
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 389 PEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAG 448
            + +RT LHMA+  G+  +V  LLKH    +                   EV   +I+ G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 449 ADIKAKLMDGTTALHLACYFGNLAMVNYL 477
           AD+  +     TA  ++   GN  +   L
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.7 bits (153), Expect = 2e-12
 Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             L  A      + V++L+  GA         +   L       S   V L      +  
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
             V      TPLH+A       IV++LL  GAD+N+ +    T L  A   N  EV   L
Sbjct: 64  TKVDR----TPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 380 VNHGCDLSVPEGE-RTALHMASQFGNLEMVNYL 411
           + +G D+       +TA  ++   GN ++   L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.8 bits (148), Expect = 1e-11
 Identities = 31/149 (20%), Positives = 61/149 (40%)

Query: 394 TALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKA 453
             L  A++ G  + V  L+ +      D  G +PL  + +          +    +    
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 454 KLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLG 513
             +D T     A       +   L    D+N+++ L  T +++A ++NH E+  LL+K G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 514 ADVAVKMKSNFTCLHVACEFASIEMVSFL 542
           ADV  + K   T   ++ +  + ++   L
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.9 bits (138), Expect = 2e-10
 Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 4/150 (2%)

Query: 525 TCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMY 584
             L  A      + V  L+++      D  G +PLH A           L+ +       
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 585 KNDSPLHLACATGNMDMITYAMKYF---DVNIENDIGETPLHVAVSHGCLEAVKFLLNTK 641
                  L  A          +      DVN ++ +  T LH A  H   E V+ LL   
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVE-LLIKY 122

Query: 642 NIDVNHKTKDGSTALFFACYDKRLDLVEIL 671
             DV+ ++K   TA   +  +   DL EIL
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.1 bits (128), Expect = 5e-09
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 4/153 (2%)

Query: 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
             L  A+  G   D  R L+    A  T  ++   + L+ AA   +    + LL+AG   
Sbjct: 4   KKLLEAARAGQD-DEVRILMA-NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
           D     D +PL  +  +G   IV+ LL++ AD N        TALH A  HN  ++++LL
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVN-AKDMLKMTALHWATEHNHQEVVELL 119

Query: 842 LKYNADINAEDKYGKIAFHSACQAKNWDIVTFL 874
           +KY AD++ + K+ K AF  +    N D+   L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.4 bits (121), Expect = 5e-08
 Identities = 30/191 (15%), Positives = 59/191 (30%), Gaps = 39/191 (20%)

Query: 651 DGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGAD 710
           D    L  A    + D V IL+   A         +PL+ A           +L      
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGV-- 58

Query: 711 VNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDL 770
              + +A   +          + +     ++ +  AD+  ++    TAL++A   N+ ++
Sbjct: 59  ---SRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV 115

Query: 771 LKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAA 830
           ++ L+K GAD                                       K   TA   + 
Sbjct: 116 VELLIKYGADVHTQS----------------------------------KFCKTAFDISI 141

Query: 831 FHNQLDIIKLL 841
            +   D+ ++L
Sbjct: 142 DNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.4 bits (108), Expect = 2e-06
 Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 24/152 (15%)

Query: 216 KALCWALQEKKTDIAKLLVDKGVPLNLVDKG---------------------VPLNYSRR 254
           K L  A +  + D  ++L+  G P      G                       ++   R
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 255 IIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDY 314
                TPLH A       +V++LL+ GA+    +     TALH A      ++V+LL  Y
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 315 GAEKSVNVQNVAGLTPLHIACRRKCLEIVKIL 346
           GA+  V+ Q+    T   I+      ++ +IL
Sbjct: 123 GAD--VHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.0 bits (157), Expect = 7e-13
 Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 15/154 (9%)

Query: 290 SRNRTALHV---AAIVESVDIVKLLFDYGAEKS----VNVQNVAGLTPLHIACR---RKC 339
           +     LH    A     +  +   +  G + +    +   +    T LH+A R   R  
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS 60

Query: 340 LEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHM 398
           L IV  L+    +++     G T L      +  E    L+     + +  E   T L +
Sbjct: 61  LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 120

Query: 399 ASQFGNLEMVNYLLKH----ININHQDKDGWTPL 428
           A +  +      L +      N +   +  W  L
Sbjct: 121 AKRLKHEHCEELLTQALSGRFNSHVHVEYEWRLL 154

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.8 bits (141), Expect = 1e-10
 Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 35/163 (21%)

Query: 324 NVAGLTPLHIACRRKCLEIVKILLDKGADIN------SGNDDGCTPLFCAIAQNCLEVFN 377
             A L  L  A + + +  +      G D+       +G++   T L  A+         
Sbjct: 3   TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAV--------- 53

Query: 378 YLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQAS 437
                                +    +L +V++L+++     +     +          +
Sbjct: 54  --------------------RSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN 93

Query: 438 LEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKH 480
            E    ++   A I+     G T L +A    +      L + 
Sbjct: 94  AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 136

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.1 bits (139), Expect = 2e-10
 Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 16/143 (11%)

Query: 651 DGST---ALFFACYDKRLDLVEILLEANADVN---LGDGTYTPLYTALM------KDPSL 698
           D +    +L  A   + +  +        D+         + P  TAL          SL
Sbjct: 2   DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61

Query: 699 DIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTA 758
            I+  LV+   +++               +   +C  +         A I + N +  T 
Sbjct: 62  HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR----GKASIEIANESGETP 117

Query: 759 LNFAAFGNNLDLLKFLLKAGADP 781
           L+ A    +    + L +A +  
Sbjct: 118 LDIAKRLKHEHCEELLTQALSGR 140

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.1 bits (139), Expect = 2e-10
 Identities = 19/132 (14%), Positives = 43/132 (32%), Gaps = 10/132 (7%)

Query: 394 TALHMASQFGNLEMVNYLLKH-------ININHQDKDGWTPL--TCSIKGQASLEVFHSI 444
            +L  A +  ++  +             I + +  +   T L        + SL +   +
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 445 IEAGADIKAKLMDG-TTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHL 503
           ++   ++  +   G T   +         +   L     I   N+ G+TP+  A +  H 
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127

Query: 504 EIFNLLLKLGAD 515
               LL +  + 
Sbjct: 128 HCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.8 bits (133), Expect = 1e-09
 Identities = 21/168 (12%), Positives = 45/168 (26%), Gaps = 32/168 (19%)

Query: 485 SENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLS 544
           ++       +  A+K   +         G D+  K+                        
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANG------------------- 41

Query: 545 HIGVNLQDNKGCTPLHCAIV---GNQLEVFNHLINSNADITM---YKNDSPLHLACATGN 598
                       T LH A+       L + + L+ ++ ++       + +  +       
Sbjct: 42  -------HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNA 94

Query: 599 MDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVN 646
             +         + I N+ GETPL +A         + L    +   N
Sbjct: 95  ECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN 142

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.6 bits (117), Expect = 2e-07
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 10/138 (7%)

Query: 752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDIL------DLKDTSPLLSSCR---QGLYE 802
                 +L  A    ++  L      G D             D + L  + R   +    
Sbjct: 3   TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62

Query: 803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862
           IVD L++ + + + +T K  +   H     +  + +KLLL+  A I   ++ G+     A
Sbjct: 63  IVDFLVQNSGNLDKQTGKGSTAL-HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121

Query: 863 CQAKNWDIVTFLLDAGSN 880
            + K+      L  A S 
Sbjct: 122 KRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.8 bits (115), Expect = 3e-07
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 12/135 (8%)

Query: 423 DGWTPLT--CSIKGQASLEVFHSIIEAGADIKAKLM------DGTTALHLACYF---GNL 471
           D    L   C       +         G D+  K+          TALHLA       +L
Sbjct: 2   DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61

Query: 472 AMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVA 530
            +V++LV++  +++ +   G T +++    ++ E   LLL+  A + +  +S  T L +A
Sbjct: 62  HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121

Query: 531 CEFASIEMVSFLLSH 545
                      L   
Sbjct: 122 KRLKHEHCEELLTQA 136

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.7 bits (107), Expect = 3e-06
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 9/138 (6%)

Query: 684 TYTPLYTALM--KDPSLDIIKMLVKYGADVN----LTNEACYYMTPLHYASYRGDCN--D 735
           T   L++     K   +  +      G D+     L N      T LH A    D     
Sbjct: 3   TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62

Query: 736 IARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSS 795
           I  FL  + + ++  +     TAL++    +N + LK LL+  A  +I +    +PL  +
Sbjct: 63  IVDFL-VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121

Query: 796 CRQGLYEIVDTLLEYNAD 813
            R       + L +  + 
Sbjct: 122 KRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.0 bits (100), Expect = 3e-05
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 11/132 (8%)

Query: 557 TPLHCAIVGNQLEVFNHLINSNADITM--------YKNDSPLHLACAT---GNMDMITYA 605
             L  A+    +           D+T           +++ LHLA  +    ++ ++ + 
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 606 MKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRL 665
           ++      +     +                LL      +    + G T L  A   K  
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127

Query: 666 DLVEILLEANAD 677
              E+L +A + 
Sbjct: 128 HCEELLTQALSG 139

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (127), Expect = 3e-09
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 1/118 (0%)

Query: 394 TALHMASQFGNLEMVNYLLKH-ININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIK 452
             L  A+  G +E V  LL+   N N  +  G  P+   + G A +     +  A  +  
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 453 AKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLL 510
                       A       +V        ++  +  G+ P+  A +  H ++   L 
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (120), Expect = 3e-08
 Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 1/119 (0%)

Query: 294 TALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADI 353
             L  AA    V+ V+ L + GA  +           + +    +  E++ +   +    
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 354 NSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLL 412
           +                    V  +      D+    G R  + +A + G+ ++  YL 
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWG-RLPVDLAEELGHRDVARYLR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (119), Expect = 4e-08
 Identities = 14/119 (11%), Positives = 29/119 (24%), Gaps = 4/119 (3%)

Query: 525 TCLHVACEFASIEMVSFLLSHIGVN----LQDNKGCTPLHCAIVGNQLEVFNHLINSNAD 580
             L  A     +E V  LL              +    +          +  H    N  
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 581 ITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLN 639
                       A       ++        +++ +  G  P+ +A   G  +  ++L  
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (105), Expect = 3e-06
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 4/126 (3%)

Query: 652 GSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADV 711
            +  L  A    R++ V  LLEA A+ N  +         +M   +     +L+      
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 712 NLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLL 771
                               D   +        +     R+   R  ++ A    + D+ 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV----RDAWGRLPVDLAEELGHRDVA 118

Query: 772 KFLLKA 777
           ++L  A
Sbjct: 119 RYLRAA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (102), Expect = 6e-06
 Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 2/122 (1%)

Query: 458 GTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVA 517
               L  A   G +  V  L++     +  +         +      +  LLL  GA+  
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 518 VKMKSNFTCLHVACEFASIEMVS--FLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLI 575
               +  T                    +   ++++D  G  P+  A      +V  +L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 576 NS 577
            +
Sbjct: 123 AA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (102), Expect = 7e-06
 Identities = 14/122 (11%), Positives = 32/122 (26%), Gaps = 2/122 (1%)

Query: 555 GCTPLHCAIVGNQLEVFNHLINSNA--DITMYKNDSPLHLACATGNMDMITYAMKYFDVN 612
               L  A    ++E    L+ + A  +        P+ +             +   + N
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 613 IENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILL 672
             +    T      +         +L+     ++ +   G   +  A      D+   L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 673 EA 674
            A
Sbjct: 123 AA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (91), Expect = 2e-04
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 1/121 (0%)

Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
             L  AA    ++ ++ LL+AGA+P+  +     P+          + + LL + A+ N 
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGS-ARVAELLLLHGAEPNC 63

Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD 876
                 +  +H AA    LD + +L +  A ++  D +G++    A +  + D+  +L  
Sbjct: 64  ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123

Query: 877 A 877
           A
Sbjct: 124 A 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (87), Expect = 8e-04
 Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 3/122 (2%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             L +A     +E V+ LLE GANP A      R    +      V  + LL       +
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYL 379
                     P+H A R   L+ + +L   GA ++  +  G  P+  A      +V  YL
Sbjct: 65  DPATLT---RPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121

Query: 380 VN 381
             
Sbjct: 122 RA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 822 GSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW 868
            +  L TAA   +++ ++ LL+  A+ NA + YG+            
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSAR 49

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (82), Expect = 0.004
 Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 3/121 (2%)

Query: 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP 781
             L  A+ RG   +  R L+E   A+    N   R  +     G+       LL      
Sbjct: 5   DWLATAAARGRV-EEVRALLE-AGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 782 DILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLL 841
                  T P+  + R+G  + +  L    A  ++R    G   +  A      D+ + L
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVR-DAWGRLPVDLAEELGHRDVARYL 121

Query: 842 L 842
            
Sbjct: 122 R 122

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (125), Expect = 9e-09
 Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKS 319
             L  + L  + +LV+ ++ +  +P       +     +   V +     + F      +
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDP---SLPNDEGITALHNAVCAGHTEIVKFLVQFGVN 59

Query: 320 VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDG---CTPLFCAIAQNCLEVF 376
           VN  +  G TPLH A     +++ K L++ GA + +               + +   +  
Sbjct: 60  VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS 119

Query: 377 NYLVNHGCDL 386
            +L      +
Sbjct: 120 QFLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (122), Expect = 2e-08
 Identities = 18/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)

Query: 394 TALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKA 453
             L  +S  G  ++V  ++  ++      D       +       E+   +++ G ++ A
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 454 KLMDGTTALHLACYFGNLAMVNYLVKH-IDINSENDLGK---TPIYFAIKNNHLEIFNLL 509
              DG T LH A    N+ +  +LV+    + +               ++  + +    L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 510 LKLGADV 516
             +   +
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (118), Expect = 7e-08
 Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 4/128 (3%)

Query: 757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816
             L  ++     DL++ ++    DP +    +    L +     +  +   L        
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSL-PNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61

Query: 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK---IAFHSACQAKNWDIVTF 873
                G T LH AA  N + + K L++  A + A                +        F
Sbjct: 62  AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121

Query: 874 LLDAGSNI 881
           L      +
Sbjct: 122 LYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (113), Expect = 4e-07
 Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 40/166 (24%)

Query: 328 LTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLS 387
           L  L  +      ++V+ ++ +  D +  ND+G T L  A+     E+  +LV  G +  
Sbjct: 2   LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-- 59

Query: 388 VPEGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEA 447
                                          +                 +++V   ++E+
Sbjct: 60  ------------------------------VNAADSDGWTPLHCAASCNNVQVCKFLVES 89

Query: 448 GADIKAK-LMDGTTALHL--ACYFGNLAMVNYLVKHIDINSENDLG 490
           GA + A    D  TA         G      +L        +  +G
Sbjct: 90  GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL-----YGVQEKMG 130

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 3e-06
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 10/137 (7%)

Query: 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780
           +  L  +S  G+  D+ + ++ E   D +L N    TAL+ A    + +++KFL++ G +
Sbjct: 2   LALLLDSSLEGEF-DLVQRIIYEV-DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN 59

Query: 781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTA--LHTAAFHNQLDII 838
            +  D    +PL  +      ++   L+E  A     T     TA               
Sbjct: 60  VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS 119

Query: 839 KLLLKYNADINAEDKYG 855
           + L         ++K G
Sbjct: 120 QFL------YGVQEKMG 130

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 3e-05
 Identities = 15/129 (11%), Positives = 35/129 (27%), Gaps = 7/129 (5%)

Query: 654 TALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNL 713
             L  +  +   DLV+ ++    D +L +                   +++         
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITAL---HNAVCAGHTEIVKFLVQFGVN 59

Query: 714 TNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNR---TALNFAAFGNNLDL 770
            N A        + +   +   + +FLV E  A +    +++                  
Sbjct: 60  VNAADSDGWTPLHCAASCNNVQVCKFLV-ESGAAVFAMTYSDMQTAADKCEEMEEGYTQC 118

Query: 771 LKFLLKAGA 779
            +FL     
Sbjct: 119 SQFLYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 3e-05
 Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 28/152 (18%)

Query: 492 TPIYFAIKNNHLEIFNLLLKLGADV-AVKMKSNFTCLHVACEFASIEMVSFLLSHIGVNL 550
             +  +      ++   ++    D      +      +  C   +  +   +   + VN 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 551 QDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFD 610
            D+ G TPLHCA   N ++V   L+ S A +      S +  A                 
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA-MTYSDMQTA----------------- 104

Query: 611 VNIENDIGETPLHVAVSHGCLEAVKFLLNTKN 642
                          +  G  +  +FL   + 
Sbjct: 105 ---------ADKCEEMEEGYTQCSQFLYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (97), Expect = 5e-05
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 5/127 (3%)

Query: 460 TALHLACYFGNLAMVNYLVKH-IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAV 518
             L  +   G   +V  ++    D +  ND G T ++ A+   H EI   L++ G +V  
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 519 KMKSNFTCLHVACEFASIEMVSFLLSH----IGVNLQDNKGCTPLHCAIVGNQLEVFNHL 574
                +T LH A    ++++  FL+        +   D +        +     +    L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 575 INSNADI 581
                 +
Sbjct: 123 YGVQEKM 129

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.0 bits (94), Expect = 7e-05
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 329 TPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSV 388
                A +   L+ VK  + KG D+N   + G  PL  A     LE+  +L+  G D++ 
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 389 PEGERTALHMASQFGNL--EMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIE 446
           P+       +++ +      +   L K  +   +  DG T L          +   ++++
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEA-----TDNQAIKALLQ 118

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.7 bits (88), Expect = 5e-04
 Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 1/113 (0%)

Query: 394 TALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKA 453
                A + G+L+ V   +      ++  +G             LE+   ++  GADI A
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 454 KLMDGTTALHLACYFGNLAMV-NYLVKHIDINSENDLGKTPIYFAIKNNHLEI 505
                 T L  A Y G+++ V   L K  D   +   G T +          +
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKAL 116

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 12/118 (10%), Positives = 29/118 (24%), Gaps = 8/118 (6%)

Query: 525 TCLHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMY 584
                A +   ++ V   ++      +  +G                   +         
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 585 KNDSPLHLACATGNMDMI----TYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLL 638
            +   +    +      +        K  D  ++   G T L    +    +A+K LL
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN----QAIKALL 117

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	1011
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.98
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.96
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.96
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.96
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.96
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.96
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.95
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.94
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.93
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.93
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.93
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.93
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.92
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.92
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.92
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.91
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.9
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.9
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.9
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.89
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.86
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.85
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.85
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.85
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.82
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.8
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.79

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-47  Score=430.64  Aligned_cols=378  Identities=30%  Similarity=0.397  Sum_probs=250.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHH
Q psy8109         460 TALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEM  538 (1011)
Q Consensus       460 t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~i  538 (1011)
                      ||||.||..|+.++|++|++ |++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.++
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~~   81 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNM   81 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHH
T ss_pred             ChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence            67777777777777777777 66777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHhc-cCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCC
Q psy8109         539 VSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDI  617 (1011)
Q Consensus       539 v~~Ll~~-~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~  617 (1011)
                      +++|+.. ...........+++..+...+...........+                              ...+..+..
T Consensus        82 ~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~  131 (408)
T d1n11a_          82 VKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE------------------------------ASQACMTKK  131 (408)
T ss_dssp             HHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT------------------------------CCSCCCCTT
T ss_pred             HHHHHHhhhccccccccccchhhhhhhhccccccccccccc------------------------------ccccccccc
Confidence            7777665 333444444455555555555544444443333                              233455667


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHcCC
Q psy8109         618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDP  696 (1011)
Q Consensus       618 g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~  696 (1011)
                      +.++++.|+..++.+++++|++ .+++++..+..+.+||++|+..|+.+++++|+.+|++++..+. +.+|++.+.. ..
T Consensus       132 ~~~~l~~a~~~~~~~~v~~ll~-~~~~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~-~~  209 (408)
T d1n11a_         132 GFTPLHVAAKYGKVRVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAK-QN  209 (408)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHH-TT
T ss_pred             cchHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhc-cc
Confidence            7788888888888888888887 7888888888888888888888888888888888887776555 5566665555 55


Q ss_pred             CHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109         697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK  776 (1011)
Q Consensus       697 ~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  776 (1011)
                      ..++...++..+......+..  +.||+++|+..++ .++++++... +...+..+..|.|||+.|+..++.+++++|++
T Consensus       210 ~~~~~~~l~~~~~~~~~~~~~--~~t~l~~a~~~~~-~~~~~~~~~~-~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~  285 (408)
T d1n11a_         210 QVEVARSLLQYGGSANAESVQ--GVTPLHLAAQEGH-AEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIK  285 (408)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHTTC-HHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred             hhhhhhhhhhccccccccCCC--CCCHHHHHHHhCc-HhHhhhhhcc-ccccccccCCCCChhhhhhhcCcHHHHHHHHH
Confidence            555666665555554444444  5566666666666 6666666555 55555566666666666666666666666666


Q ss_pred             CCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC
Q psy8109         777 AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK  856 (1011)
Q Consensus       777 ~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~  856 (1011)
                      +|++++..+..+.|||+.|+..++.++++++++.|++++. .+..|.||||+|+.+|+.++|++|+++||++|.+|..|+
T Consensus       286 ~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~-~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~  364 (408)
T d1n11a_         286 HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA-KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGT  364 (408)
T ss_dssp             HTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSC
T ss_pred             CCCccccccccccccchhhcccCcceeeeeeccccccccc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence            6666666666666666666666666666666666666655 455666666666666666666666666666666666666


Q ss_pred             CHHHHHHHcCCHHHHHHH
Q psy8109         857 IAFHSACQAKNWDIVTFL  874 (1011)
Q Consensus       857 taL~~A~~~g~~~iv~~L  874 (1011)
                      ||||+|++.||.++|++|
T Consensus       365 t~L~~A~~~~~~~iv~~L  382 (408)
T d1n11a_         365 TPLAIAKRLGYISVTDVL  382 (408)
T ss_dssp             CHHHHHHHTTCHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHH
Confidence            666666666666665544

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-46  Score=426.12  Aligned_cols=385  Identities=29%  Similarity=0.374  Sum_probs=354.9

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc-cCCCCCCCCCCCHHHHHHhcCCHH
Q psy8109         491 KTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLE  569 (1011)
Q Consensus       491 ~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~g~t~L~~A~~~g~~e  569 (1011)
                      .||||.||..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++ ++++..+..|.|||++|+..|+.+
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~   80 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN   80 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            3899999999999999999999999999999999999999999999999999998 888999999999999999999999


Q ss_pred             HHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCC
Q psy8109         570 VFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKT  649 (1011)
Q Consensus       570 iv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~  649 (1011)
                      ++++|+..+.+...                              ......+++..+...+.......... .+...+..+
T Consensus        81 ~~~~Ll~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  129 (408)
T d1n11a_          81 MVKLLLENNANPNL------------------------------ATTAGHTPLHIAAREGHVETVLALLE-KEASQACMT  129 (408)
T ss_dssp             HHHHHHHHTCCTTC------------------------------CCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCC
T ss_pred             HHHHHHHhhhcccc------------------------------ccccccchhhhhhhhccccccccccc-ccccccccc
Confidence            99999887765422                              23345668888888888877777776 788888899


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHH
Q psy8109         650 KDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYAS  728 (1011)
Q Consensus       650 ~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~  728 (1011)
                      ..+.++++.|+..++.+++++|+++|++++..+. +.+||+.|+. .++.+++++|+.+|++++..+..  |.||+|.++
T Consensus       130 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~L~~A~~-~~~~~~~~~Ll~~g~~~~~~~~~--~~t~l~~~~  206 (408)
T d1n11a_         130 KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVH-HNNLDIVKLLLPRGGSPHSPAWN--GYTPLHIAA  206 (408)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHH-TTCHHHHHHHGGGTCCSCCCCTT--CCCHHHHHH
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCcCchHHHHHHH-cCCHHHHHHHHhcCCcccccCCC--CCCcchhhh
Confidence            9999999999999999999999999999998876 8899999988 89999999999999999988877  999999999


Q ss_pred             HCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHH
Q psy8109         729 YRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLL  808 (1011)
Q Consensus       729 ~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll  808 (1011)
                      .... .++..+|+.. +......+..+.|||+.|+..++.+++++++..+...+..+..|.|||+.|+..++.+++++|+
T Consensus       207 ~~~~-~~~~~~l~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll  284 (408)
T d1n11a_         207 KQNQ-VEVARSLLQY-GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLI  284 (408)
T ss_dssp             HTTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred             ccch-hhhhhhhhhc-cccccccCCCCCCHHHHHHHhCcHhHhhhhhccccccccccCCCCChhhhhhhcCcHHHHHHHH
Confidence            9999 8899999887 7777778888999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccC
Q psy8109         809 EYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYR  888 (1011)
Q Consensus       809 ~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g  888 (1011)
                      ++|++++. .+..+.||||.|+..++.+++++|++.|+++|.+|..|+||||+|++.|+.++|++|+++||+++.+|.+|
T Consensus       285 ~~g~~~~~-~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G  363 (408)
T d1n11a_         285 KHGVMVDA-TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDG  363 (408)
T ss_dssp             HHTCCTTC-CCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSS
T ss_pred             HCCCcccc-ccccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence            99999997 77889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHhhHHhhCCHHHHHHhhhccC
Q psy8109         889 MTFESSKVVEKHVAKLRAANIYVD  912 (1011)
Q Consensus       889 ~t~l~~a~~~~~~~~~~~~~~~~~  912 (1011)
                      +||||+|++.|+.++++.+....+
T Consensus       364 ~t~L~~A~~~~~~~iv~~L~~~~~  387 (408)
T d1n11a_         364 TTPLAIAKRLGYISVTDVLKVVTD  387 (408)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHHHh
Confidence            999999999999999998765443

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-31  Score=288.41  Aligned_cols=262  Identities=29%  Similarity=0.331  Sum_probs=224.6

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhhCCCCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHcC
Q psy8109         618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKT-KDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMKD  695 (1011)
Q Consensus       618 g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~-~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~~  695 (1011)
                      +.|+|+.|+..|+.++|++|++ .|++++.++ ..|+||||+|+..|+.+++++|++.+........ ..+|.+.++. .
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~-~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~-~   82 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI-A   82 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-H
T ss_pred             CcHHHHHHHHcCCHHHHHHHHH-CCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhh-c
Confidence            4578999999999999999998 889988665 4688999999999999999999999888877766 7788888777 7


Q ss_pred             CCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCccc----------ccCCCccHHHHHHhC
Q psy8109         696 PSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITL----------RNFNNRTALNFAAFG  765 (1011)
Q Consensus       696 ~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~----------~~~~g~t~L~~Aa~~  765 (1011)
                      +..+...++++...+....+..  +.+++++|+..++ ..++..++.. ..+++.          ....|.||||+|+..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~a~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~  158 (285)
T d1wdya_          83 GSVKLLKLFLSKGADVNECDFY--GFTAFMEAAVYGK-VKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEK  158 (285)
T ss_dssp             TCHHHHHHHHHTTCCTTCBCTT--CCBHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred             CCccccchhhhhcccccccccC--CCchhHHHHHhcc-hhhhhhhhhh-cccccccccchhhhhhhcccCchHHHHHHHc
Confidence            7888888888887766555555  8899999999998 7777777665 333332          345689999999999


Q ss_pred             CCHHHHHHHHHC-CCCCCCCCcCCCCcccc----cccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHH
Q psy8109         766 NNLDLLKFLLKA-GADPDILDLKDTSPLLS----SCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKL  840 (1011)
Q Consensus       766 g~~~iv~~Ll~~-gad~~~~d~~g~t~L~~----A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~  840 (1011)
                      |+.+++++|++. |++++..+..|.++++.    +...+..+++++|+++|++++. .+..|.||||.|+..|+.++|++
T Consensus       159 ~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~-~~~~g~t~L~~a~~~~~~~~v~~  237 (285)
T d1wdya_         159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV-RGERGKTPLILAVEKKHLGLVQR  237 (285)
T ss_dssp             TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC-CCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             CCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCc-cCCCCCCccchhhhcCcHHHHHH
Confidence            999999999975 89999999999887654    4556678899999999999997 78899999999999999999999


Q ss_pred             HHh-ccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccc
Q psy8109         841 LLK-YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK  886 (1011)
Q Consensus       841 Ll~-~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~  886 (1011)
                      |++ .|+++|.+|.+|+||||+|++.|+.++|++|+++|||+|+.|.
T Consensus       238 lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         238 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             HHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             HHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            997 5999999999999999999999999999999999999998763

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-32  Score=281.88  Aligned_cols=220  Identities=28%  Similarity=0.375  Sum_probs=186.5

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCC
Q psy8109         618 GETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPS  697 (1011)
Q Consensus       618 g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~  697 (1011)
                      +.+.++.++..|+.+.++.++...+..++.+|..|+||||+|+..|+.+++++|+..+........              
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~--------------   68 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD--------------   68 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCT--------------
T ss_pred             CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccc--------------
Confidence            457888899999999998888878888999999999999999999999999988887665543322              


Q ss_pred             HHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHC
Q psy8109         698 LDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKA  777 (1011)
Q Consensus       698 ~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~  777 (1011)
                                         .  +.++++.++..++ .+++++|+++ +++++..+..|.||||+|+..|+.+++++|+++
T Consensus        69 -------------------~--~~~~~~~~~~~~~-~~i~~~Ll~~-~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~  125 (223)
T d1uoha_          69 -------------------A--GWSPLHIAASAGR-DEIVKALLGK-GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG  125 (223)
T ss_dssp             -------------------T--CCCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             -------------------c--ccccccccccccc-cchhHHHhcc-CceeEeeCCCCCchhhHHHHcCCHHHHHHHHHC
Confidence                               1  5677777777777 7888888887 788888888888999999888999999999998


Q ss_pred             CCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCC
Q psy8109         778 GADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKI  857 (1011)
Q Consensus       778 gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~t  857 (1011)
                      |++++..+..|.||||+|+..++.+++++|++.|.+++. .+..|+||||.|+..|+.++|++|+++|++++.+|.+|+|
T Consensus       126 g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~-~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~t  204 (223)
T d1uoha_         126 GANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNI-QDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKT  204 (223)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred             CCCCCCcCCCCCccchhhhhcCCcchhhhhccccceeee-ccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence            988888888888888888888888888888888888887 7788889999999999999999999889999888888999


Q ss_pred             HHHHHHHcCCHHHHHHHHh
Q psy8109         858 AFHSACQAKNWDIVTFLLD  876 (1011)
Q Consensus       858 aL~~A~~~g~~~iv~~Ll~  876 (1011)
                      |||+| ..|+.+|+++|++
T Consensus       205 pl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         205 PLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             HHHHC-CTTHHHHHHHHHC
T ss_pred             HHHHH-HCCCHHHHhcccC
Confidence            99887 4688888888875

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4.6e-31  Score=283.51  Aligned_cols=262  Identities=31%  Similarity=0.431  Sum_probs=237.3

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109         257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR  336 (1011)
Q Consensus       257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~  336 (1011)
                      ++.|+|+.|++.|++++|++|+++|++++..++..|+||||+|+..|+.+++++|++++.  .....+..+.+|.++|+.
T Consensus         4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~--~~~~~~~~~~~~~~~~~~   81 (285)
T d1wdya_           4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA--DPVLRKKNGATPFLLAAI   81 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHH
T ss_pred             CCcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccc--cccccccccchhhHHHhh
Confidence            457999999999999999999999999998887779999999999999999999999998  677788889999999999


Q ss_pred             cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-----------CCCCcHHHHHHhcCCH
Q psy8109         337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-----------EGERTALHMASQFGNL  405 (1011)
Q Consensus       337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----------~~~~t~L~~Aa~~g~~  405 (1011)
                      .+..+...++++...+....+..+.++++.|+..|+..++..++....+++..           ..+.|||++|++.|+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~  161 (285)
T d1wdya_          82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV  161 (285)
T ss_dssp             HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred             cCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCH
Confidence            99999999999998888888899999999999999999999999987765542           3468999999999999


Q ss_pred             HHHHHHHhcc--CccCCCCCCCcHhHHH---HhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-
Q psy8109         406 EMVNYLLKHI--NINHQDKDGWTPLTCS---IKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-  479 (1011)
Q Consensus       406 ~iv~~Ll~~~--~~~~~~~~~~t~l~~a---~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-  479 (1011)
                      +++++|+++.  +++..+..+.++.+..   ........++++|+++|++++.++..|.||||.|+..|+.+++++|++ 
T Consensus       162 ~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~  241 (285)
T d1wdya_         162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ  241 (285)
T ss_dssp             HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHS
T ss_pred             HHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHHc
Confidence            9999999864  7888888888887763   223345679999999999999999999999999999999999999997 


Q ss_pred             -ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCccccccc
Q psy8109         480 -HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKM  520 (1011)
Q Consensus       480 -~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~  520 (1011)
                       +.+++..+..|.||||+|+..|+.+++++|+++||+++..|
T Consensus       242 ~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         242 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             SSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence             78899999999999999999999999999999999998876

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=6.7e-32  Score=284.87  Aligned_cols=242  Identities=22%  Similarity=0.144  Sum_probs=166.0

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCC---cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHH
Q psy8109         613 IENDIGETPLHVAVSHGCLEAVKFLLNTKNID---VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPL  688 (1011)
Q Consensus       613 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~---~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L  688 (1011)
                      ..+.+|.||||.|+.+|+.+++++|++ .|++   ++..+..|.||||+|+..|+.+++++|+++|++++..+. +.|||
T Consensus         4 ~i~~~G~t~Lh~A~~~~~~~~v~~Ll~-~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL   82 (255)
T d1oy3d_           4 YVTEDGDTALHLAVIHQHEPFLDFLLG-FSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL   82 (255)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHH-HHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred             cCCcCCCCHHHHHHHcCCHHHHHHHHH-cCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhh
Confidence            345677888888888888888888877 5655   556667777888888888888888888888877777665 67777


Q ss_pred             HHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHh-CCC
Q psy8109         689 YTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF-GNN  767 (1011)
Q Consensus       689 ~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~-~g~  767 (1011)
                      +.|+. .++.+++++|++.+.........     .+........ ...                  ...++..... ...
T Consensus        83 ~~A~~-~~~~~~~~~Ll~~~~~~~~~~~~-----~~~~~~~~~~-~~~------------------~~~~~~~~~~~~~~  137 (255)
T d1oy3d_          83 HLACR-VRAHTCACVLLQPRPSHPRDASD-----TYLTQSQDCT-PDT------------------SHAPAAVDSQPNPE  137 (255)
T ss_dssp             HHHTT-TTCHHHHHHHSSSCCSSCCCC-----------------------------------------------------
T ss_pred             hhhhc-cCchHHHHHHHhhccchhcccch-----hhhhHHhhhc-ccc------------------hHHHHHHHhhcchh
Confidence            77766 66777777776665443221111     0000000000 000                  0000000000 011


Q ss_pred             HHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCC
Q psy8109         768 LDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD  847 (1011)
Q Consensus       768 ~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~  847 (1011)
                      ......+...+.+++.++..|.||||+|+..++.++|++|+++|++.+...+..|.||||+|+..|+.++|++|+++|++
T Consensus       138 ~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gad  217 (255)
T d1oy3d_         138 NEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD  217 (255)
T ss_dssp             ------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCC
Confidence            11222223345667777888888888888888888888888888888776677899999999999999999999999999


Q ss_pred             cccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109         848 INAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN  880 (1011)
Q Consensus       848 in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~  880 (1011)
                      ++.+|..|+||||+|+..|+.+++++|+++||+
T Consensus       218 in~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         218 PTARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            999999999999999999999999999999996

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-31  Score=274.09  Aligned_cols=215  Identities=23%  Similarity=0.282  Sum_probs=194.3

Q ss_pred             cHHHHHHHcCCCHHHHHHHH-hCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHh
Q psy8109         686 TPLYTALMKDPSLDIIKMLV-KYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF  764 (1011)
Q Consensus       686 t~L~~aa~~~~~~~iv~~Ll-~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~  764 (1011)
                      +.++.+|. .|+.+.++.++ ..+..++.++..  |.||||+|+..|+ .+++++|+.. +......+..+.++++.++.
T Consensus         5 ~~~~~~a~-~G~~~~v~~~l~~~~~~~~~~D~~--G~TpLh~Aa~~g~-~e~~~~l~~~-~~~~~~~~~~~~~~~~~~~~   79 (223)
T d1uoha_           5 LMVCNLAY-SGKLEELKESILADKSLATRTDQD--SRTALHWACSAGH-TEIVEFLLQL-GVPVNDKDDAGWSPLHIAAS   79 (223)
T ss_dssp             SHHHHHHH-TTCHHHHHHHHHHCGGGGGCCCTT--SCCHHHHHHHHTC-HHHHHHHHHH-TCCSCCCCTTCCCHHHHHHH
T ss_pred             HHHHHHHH-hCCHHHHHHHHHhCCCcCcCcCCC--CCCHHHHHHHhhh-hccccccccc-cccccccccccccccccccc
Confidence            44555555 66666664443 456666777776  9999999999999 9999999998 88888888899999999999


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhc
Q psy8109         765 GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKY  844 (1011)
Q Consensus       765 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~  844 (1011)
                      .|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.
T Consensus        80 ~~~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~-~~~~~~t~L~~a~~~~~~~~~~~L~~~  158 (223)
T d1uoha_          80 AGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA-KDHYEATAMHRAAAKGNLKMIHILLYY  158 (223)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             ccccchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCccchhhhhcCCcchhhhhccc
Confidence            9999999999999999999999999999999999999999999999999997 788999999999999999999999999


Q ss_pred             cCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109         845 NADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA  907 (1011)
Q Consensus       845 ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  907 (1011)
                      |++++.+|..|+||||+|+..|+.++|++|+++|++++..|.+|+||||+| ..|+.++++.+
T Consensus       159 ~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A-~~~~~~i~~~L  220 (223)
T d1uoha_         159 KASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRM  220 (223)
T ss_dssp             TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC-CTTHHHHHHHH
T ss_pred             cceeeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HCCCHHHHhcc
Confidence            999999999999999999999999999999999999999999999999998 46888887654

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.4e-30  Score=274.74  Aligned_cols=246  Identities=22%  Similarity=0.281  Sum_probs=184.9

Q ss_pred             CCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcC
Q psy8109         550 LQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHG  629 (1011)
Q Consensus       550 ~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g  629 (1011)
                      ..+.+|.||||+|+..|+.+++++|+++|+++..                           ++..+..|.||||+|+..|
T Consensus         4 ~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~---------------------------i~~~~~~g~TpL~~A~~~g   56 (255)
T d1oy3d_           4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEY---------------------------LDLQNDLGQTALHLAAILG   56 (255)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGG---------------------------GGCCCTTSCCHHHHHHHHT
T ss_pred             cCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCccc---------------------------ccCcCCCCCCccchHHhhc
Confidence            3567788888888888888888888887766432                           3667788999999999999


Q ss_pred             CHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCC
Q psy8109         630 CLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGA  709 (1011)
Q Consensus       630 ~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~  709 (1011)
                      +.+++++|++ .|++++..+..|.|||++|+..++.+++++|++.+.........  ....... ......         
T Consensus        57 ~~~iv~~Ll~-~ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~--~~~~~~~-~~~~~~---------  123 (255)
T d1oy3d_          57 EASTVEKLYA-AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASD--TYLTQSQ-DCTPDT---------  123 (255)
T ss_dssp             CHHHHHHHHH-TTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------------------
T ss_pred             cccccccccc-ccccccccccccchhhhhhhccCchHHHHHHHhhccchhcccch--hhhhHHh-hhcccc---------
Confidence            9999999999 89999999999999999999999999999999876544322211  0000000 000000         


Q ss_pred             CCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCC-CcCC
Q psy8109         710 DVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDIL-DLKD  788 (1011)
Q Consensus       710 ~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~-d~~g  788 (1011)
                                ...++........ ......+....+.+++.++..|.||||+|+..|+.+++++|++.|++++.. +..|
T Consensus       124 ----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g  192 (255)
T d1oy3d_         124 ----------SHAPAAVDSQPNP-ENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCG  192 (255)
T ss_dssp             -------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTC
T ss_pred             ----------hHHHHHHHhhcch-hHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccc
Confidence                      1111111111111 222233333447788889999999999999999999999999999988864 5689


Q ss_pred             CCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCC
Q psy8109         789 TSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD  847 (1011)
Q Consensus       789 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~  847 (1011)
                      .||||+|+..|+.++|++|+++|++++. .+..|.||||+|+.+|+.+++++|+++||+
T Consensus       193 ~TpL~~A~~~~~~~~v~~Ll~~gadin~-~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         193 RTPLHLAVEAQAASVLELLLKAGADPTA-RMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             cccccccccccHHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            9999999999999999999999999998 788999999999999999999999999996

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.3e-29  Score=260.56  Aligned_cols=223  Identities=25%  Similarity=0.304  Sum_probs=187.9

Q ss_pred             cHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHH
Q psy8109         620 TPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLD  699 (1011)
Q Consensus       620 t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~  699 (1011)
                      +|||.||..|+.++++.|++..+.+++.++.+|+||||+|+..|+.+++++|+++|++++..+.                
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~----------------   65 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDY----------------   65 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGC----------------
T ss_pred             HhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhcccccccc----------------
Confidence            7999999999999999999877889999999999999999999999999999999888764321                


Q ss_pred             HHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCC--CcccccCCCccHHHHHHhCCCHHHHHHHHHC
Q psy8109         700 IIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNA--DITLRNFNNRTALNFAAFGNNLDLLKFLLKA  777 (1011)
Q Consensus       700 iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~--~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~  777 (1011)
                                    .+.  .|.+|+++++..+. .++++.++.. +.  +....+..+.|+++.++..++.+++++|+..
T Consensus        66 --------------~~~--~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~  127 (229)
T d1ixva_          66 --------------PDD--SGWTPFHIACSVGN-LEVVKSLYDR-PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN  127 (229)
T ss_dssp             --------------CCT--TSCCHHHHHHHHTC-HHHHHHHHSS-SSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             --------------ccc--cccccccccccccc-cccccccccc-cccccccccccccccccccccccchhhhhhhhhhh
Confidence                          111  16677777777777 6677666655 43  3344566788889999999999999999999


Q ss_pred             CCCCCCCCcCCCCcccccccCChHHHHHHHHHcC-CCccccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCcccccCCC
Q psy8109         778 GADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYN-ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK-YNADINAEDKYG  855 (1011)
Q Consensus       778 gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~ga~in~~d~~g  855 (1011)
                      |.+.+..+..|.||||+|+..|+.+++++|++.| .+++. .+..|+||||+|+.+|+.++|++|++ .|++++.+|..|
T Consensus       128 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~-~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g  206 (229)
T d1ixva_         128 GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW-QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG  206 (229)
T ss_dssp             TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTS
T ss_pred             cccccccCCCCCCccchhhhcccccccccccccccccccc-cccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCC
Confidence            9888888888999999999999999999999887 46676 77899999999999999999999996 599999999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109         856 KIAFHSACQAKNWDIVTFLLDAGSN  880 (1011)
Q Consensus       856 ~taL~~A~~~g~~~iv~~Ll~~ga~  880 (1011)
                      +||||+|+.   .+++++|+++|+|
T Consensus       207 ~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         207 AKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             CCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             CCHHHHHhh---HHHHHHHHHcCCC
Confidence            999999984   5799999999997

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=2e-29  Score=269.26  Aligned_cols=257  Identities=24%  Similarity=0.303  Sum_probs=185.3

Q ss_pred             ChHHHHHHH-cCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHH--------HcCCCCCCcccCCCCCC
Q psy8109         259 DTPLHSAIL-NSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLF--------DYGAEKSVNVQNVAGLT  329 (1011)
Q Consensus       259 ~t~L~~A~~-~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll--------~~~~~~~~~~~~~~g~t  329 (1011)
                      +||||+|+. .|+.++++.|.+.+.+.  .+...|+||||+||..|+.++|++|+        +.|+  ++|.+|..|+|
T Consensus         1 ~~p~~~~~~~~~~~~~~~~l~~~~~n~--~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Ga--dvn~~d~~G~T   76 (277)
T d2fo1e1           1 ESPIKLHTEAAGSYAITEPITRESVNI--IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA--DVNAMDCDENT   76 (277)
T ss_dssp             CCCCHHHHHHHSSSCCCSCCSTTTTTT--CCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCC--CTTCCCTTSCC
T ss_pred             CChHHHHHHhCCCHHHHHHHHhcCCCc--CCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCC--CccccCCCCCe
Confidence            477775443 46677777777776654  33334888999999888888887764        5567  67888888888


Q ss_pred             HHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCC---CCCCC-CCCCcHHHHHHhcCCH
Q psy8109         330 PLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGC---DLSVP-EGERTALHMASQFGNL  405 (1011)
Q Consensus       330 ~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~---~~~~~-~~~~t~L~~Aa~~g~~  405 (1011)
                      |||+|+..|+.++|++|+++|++++..+..|.|||++|+..|+.+++.++...+.   .++.. ....++.+.+...+..
T Consensus        77 pLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (277)
T d2fo1e1          77 PLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGR  156 (277)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCST
T ss_pred             eeccccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccc
Confidence            8888888888888888888888888888888888888888888888887776532   22222 3345666666655543


Q ss_pred             H---HHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh--c
Q psy8109         406 E---MVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK--H  480 (1011)
Q Consensus       406 ~---iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~--~  480 (1011)
                      +   .+.++.........                         ......+..+..|.||||+++..++.+++++++.  +
T Consensus       157 ~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~  211 (277)
T d2fo1e1         157 DQVASAKLLVEKGAKVDY-------------------------DGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG  211 (277)
T ss_dssp             THHHHHHHHHHHTCCSSC-------------------------CSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC
T ss_pred             cccccccccccccccccc-------------------------cccccccccccCCCCcccccccccccccccccccccc
Confidence            3   22222222100000                         0011123345678899999999999999988766  5


Q ss_pred             cCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHh
Q psy8109         481 IDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLS  544 (1011)
Q Consensus       481 ~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  544 (1011)
                      .+.+..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++
T Consensus       212 ~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         212 SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             ccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            6777788889999999999999999999999999999999999999999999999999998874

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=1.2e-29  Score=271.17  Aligned_cols=257  Identities=21%  Similarity=0.297  Sum_probs=161.0

Q ss_pred             cHHHHHHHc-CCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCH
Q psy8109         620 TPLHVAVSH-GCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSL  698 (1011)
Q Consensus       620 t~L~~A~~~-g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~  698 (1011)
                      ||||+++.. |..++++.|.+ .+++... +..|+||||+|+..|+.+++++|+.+                        
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~-~~~n~~~-~~~g~T~Lh~A~~~g~~~~v~~Ll~~------------------------   55 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITR-ESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVH------------------------   55 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCST-TTTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHH------------------------
T ss_pred             ChHHHHHHhCCCHHHHHHHHh-cCCCcCC-CCCCccHHHHHHHcCCHHHHHHHHhc------------------------
Confidence            566654433 44444444444 5544322 13477888888888887777777542                        


Q ss_pred             HHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCC
Q psy8109         699 DIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG  778 (1011)
Q Consensus       699 ~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g  778 (1011)
                       ..+.+++.|++++..+..  |.||||+|+..|+ .+++++|+++ |++++.++..|.|||+.|+..++.++++++...+
T Consensus        56 -~~~~~l~~Gadvn~~d~~--G~TpLh~A~~~g~-~~iv~~Ll~~-Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  130 (277)
T d2fo1e1          56 -EAKECIAAGADVNAMDCD--ENTPLMLAVLARR-RRLVAYLMKA-GADPTIYNKSERSALHQAAANRDFGMMVYMLNST  130 (277)
T ss_dssp             -HHHHHHHTCCCTTCCCTT--SCCHHHHHHHHTC-HHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSH
T ss_pred             -chhHHHHcCCCccccCCC--CCeeecccccccc-cccccccccc-ccccccccccccccccchhhhcchhhhhhhhhcc
Confidence             224455566666665554  6666666666666 6666666666 6666666666666666666666666666665543


Q ss_pred             ---CCCCCCCcCCCCcccccccCC---hHHHHHHHHHcCCCcc-------ccccCCCChHHHHHHHcCCHHHHHHHH-hc
Q psy8109         779 ---ADPDILDLKDTSPLLSSCRQG---LYEIVDTLLEYNADTN-------LRTIKHGSTALHTAAFHNQLDIIKLLL-KY  844 (1011)
Q Consensus       779 ---ad~~~~d~~g~t~L~~A~~~g---~~~iv~~Ll~~g~~~~-------~~~~~~g~t~L~~Aa~~g~~~iv~~Ll-~~  844 (1011)
                         ..++..+..+.++.+.+...+   ....+..+.+......       ...+..|+||||.++..++.+++++++ ..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~  210 (277)
T d2fo1e1         131 KLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK  210 (277)
T ss_dssp             HHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS
T ss_pred             cccccccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCccccccccccccccccccccc
Confidence               234445555556655554443   3334444444332211       013456777777777777777777644 55


Q ss_pred             cCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109         845 NADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA  907 (1011)
Q Consensus       845 ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  907 (1011)
                      |.+++.+|..|+||||+|+..|+.++|++|+++|++++.+|.+|.||||+|++.|+.++++.+
T Consensus       211 ~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL  273 (277)
T d2fo1e1         211 GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF  273 (277)
T ss_dssp             CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred             cccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence            677777777777777777777777777777777777777777777777777777777777654

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.96  E-value=7.6e-30  Score=274.80  Aligned_cols=235  Identities=28%  Similarity=0.304  Sum_probs=171.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCC
Q psy8109         617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDP  696 (1011)
Q Consensus       617 ~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~  696 (1011)
                      .+.|+|+.||..|+.++|++|++ .|+++|..+.+|.||||+|+..|+.+++++|+++|++......             
T Consensus        39 ~~~t~l~~A~~~G~~~~v~~Ll~-~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~-------------  104 (291)
T d1s70b_          39 DDGAVFLAACSSGDTEEVLRLLE-RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDN-------------  104 (291)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHH-HCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-------------
T ss_pred             CCchHHHHHHHcCCHHHHHHHHH-CCCCCCccCCCCCcHHHHHHhcCCceeeeeecccccccccccc-------------
Confidence            35689999999999999999998 8999999999999999999999999999999998887665443             


Q ss_pred             CHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109         697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK  776 (1011)
Q Consensus       697 ~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  776 (1011)
                                          .  +.+||+.++..++ .+++++|+++ |+..+..+..+.+++++|+..++.++++.++.
T Consensus       105 --------------------~--~~~~L~~a~~~~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  160 (291)
T d1s70b_         105 --------------------E--GWIPLHAAASCGY-LDIAEYLISQ-GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN  160 (291)
T ss_dssp             --------------------T--SCCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred             --------------------c--ccccccccccccc-cchhhccccc-CcccccccccCccccccccccccchhcccccc
Confidence                                1  4455555555555 5555555555 55555555556666666666666666665553


Q ss_pred             C-CCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCC
Q psy8109         777 A-GADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG  855 (1011)
Q Consensus       777 ~-gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g  855 (1011)
                      . |.++......       ............+.....+... .+..|.||||.|+..|+.+++++|+++|+++|.+|..|
T Consensus       161 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g  232 (291)
T d1s70b_         161 RQGVDIEAARKE-------EERIMLRDARQWLNSGHINDVR-HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG  232 (291)
T ss_dssp             HHTCCHHHHHHH-------HHHHHHHHHHHHHHHTCCCCCC-CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred             cccccccccccc-------ccccccccchhhhccccccccc-ccCCCCChhhHHHHcCChhhhcccccceecccccccCC
Confidence            3 2221111100       0001112233333333333332 56788899999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHh
Q psy8109         856 KIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVV  897 (1011)
Q Consensus       856 ~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~  897 (1011)
                      +||||+|+..|+.++|++|+++|||++..|..|+||||+|++
T Consensus       233 ~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e  274 (291)
T d1s70b_         233 WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE  274 (291)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999975

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.96  E-value=9.1e-29  Score=266.27  Aligned_cols=261  Identities=23%  Similarity=0.290  Sum_probs=198.1

Q ss_pred             CHHHHHHHHHcCCCCccccc--------CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHH
Q psy8109         270 DIELVKLLLEKGANPLAIEK--------SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLE  341 (1011)
Q Consensus       270 ~~~iv~~Ll~~g~~~~~~~~--------~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~  341 (1011)
                      ..+.++.+.....+......        ..+.|||+.||..|+.++|++|+++|+  ++|..|..|.||||+|+.+|+.+
T Consensus        10 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~G~~~~v~~Ll~~Ga--dvn~~d~~G~T~L~~A~~~g~~e   87 (291)
T d1s70b_          10 RNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA--DINYANVDGLTALHQACIDDNVD   87 (291)
T ss_dssp             HHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCC--CTTCBCTTCCBHHHHHHHTTCHH
T ss_pred             hHHHHHHHHhCcccccCchhhccccccCCCCchHHHHHHHcCCHHHHHHHHHCCC--CCCccCCCCCcHHHHHHhcCCce
Confidence            34555555555444332221        114588999999999999999999998  78888999999999999999999


Q ss_pred             HHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhccCccCC
Q psy8109         342 IVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHININHQ  420 (1011)
Q Consensus       342 iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~  420 (1011)
                      +|++|+++|++++..+..+.+||++|+..|+.+++++|+++|+..+.. ..+.+++++|+..++.+.++.++.....   
T Consensus        88 iv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~---  164 (291)
T d1s70b_          88 MVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGV---  164 (291)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTC---
T ss_pred             eeeeecccccccccccccccccccccccccccchhhcccccCcccccccccCccccccccccccchhcccccccccc---
Confidence            999999999988888888899999999999999999999998887766 6678899999999999988888865311   


Q ss_pred             CCCCCcHhHH--HHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHH
Q psy8109         421 DKDGWTPLTC--SIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFA  497 (1011)
Q Consensus       421 ~~~~~t~l~~--a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A  497 (1011)
                           .....  .............+.....+....+..|.||||.|+..|+.+++++|++ +++++..+..|+||||+|
T Consensus       165 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A  239 (291)
T d1s70b_         165 -----DIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAA  239 (291)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH
T ss_pred             -----ccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHH
Confidence                 11110  0000012334444555555666667788888998888888888888888 778888888888899888


Q ss_pred             HHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHh
Q psy8109         498 IKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLS  544 (1011)
Q Consensus       498 ~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  544 (1011)
                      +..|+.++|++|+++|++++..+..|.||||+|++    +++++|.+
T Consensus       240 ~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e----~~~~~L~~  282 (291)
T d1s70b_         240 AHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLEE  282 (291)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS----GGGHHHHH
T ss_pred             HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----HHHHHHHH
Confidence            88888888888888888888888888888888864    45555544

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.9e-27  Score=245.94  Aligned_cols=218  Identities=23%  Similarity=0.277  Sum_probs=183.4

Q ss_pred             CHHHHHHHcCChhhHHHHHh--hccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcc---cCCCCCCcHHHHHHHc
Q psy8109         588 SPLHLACATGNMDMITYAMK--YFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVN---HKTKDGSTALFFACYD  662 (1011)
Q Consensus       588 t~l~~A~~~g~~~iv~~Ll~--~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~---~~~~~g~t~L~~A~~~  662 (1011)
                      +|||.|+..|+.++++.|++  ...++..|..|.||||+|+..|+.+++++|++ .|++++   ..+..|.+|+++++..
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~   80 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLS-KMENVNLDDYPDDSGWTPFHIACSV   80 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHT-TCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred             HhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhh-hhccccccccccccccccccccccc
Confidence            57777777777777777776  45678889999999999999999999999999 788875   4567889999999999


Q ss_pred             CCHHHHHHHHHCCCCCcCCCC---CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHH
Q psy8109         663 KRLDLVEILLEANADVNLGDG---TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARF  739 (1011)
Q Consensus       663 g~~~iv~~Ll~~ga~~~~~~~---~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~  739 (1011)
                      +..++++.++..+...+....   ..++++.++. .++.+++++|+..|...+..+..  |.||||+|+..|+ .+++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~--g~t~l~~a~~~~~-~~~~~~  156 (229)
T d1ixva_          81 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVG-KKWFEVSQFLIENGASVRIKDKF--NQIPLHRAASVGS-LKLIEL  156 (229)
T ss_dssp             TCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCSCCCCTT--SCCHHHHHHHHTC-HHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccc-cchhhhhhhhhhhcccccccCCC--CCCccchhhhccc-cccccc
Confidence            999999999998876654332   7788888877 78888999998888888777766  8889999998888 888888


Q ss_pred             HHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH-CCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCC
Q psy8109         740 LVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK-AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD  813 (1011)
Q Consensus       740 Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  813 (1011)
                      |++..+.+++.++..|.||||+|+..|+.++|++|++ .|++++.+|..|+||||+|+.   .+++++|+++|+|
T Consensus       157 Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         157 LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             HHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             ccccccccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCCC
Confidence            8888557888888889999999999999999998886 488888888888999998874   4688888888876

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.7e-26  Score=237.56  Aligned_cols=222  Identities=27%  Similarity=0.297  Sum_probs=185.8

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHC
Q psy8109         651 DGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYR  730 (1011)
Q Consensus       651 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~  730 (1011)
                      +|.||||+|+..|+.+++++|++                             .+.+.|++++..+..  |.||||+|+..
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~-----------------------------~~~~~g~~in~~d~~--g~TpL~~A~~~   50 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVN-----------------------------LFQQGGRELDIYNNL--RQTPLHLAVIT   50 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHH-----------------------------HHHHTTCCSCCCCTT--SCCHHHHHHHT
T ss_pred             CCccHHHHHHHcCCHHHHHHHHH-----------------------------HHHHCCCCCCccCCC--CCccceehhcc
Confidence            57888888888888888877753                             234556666666655  88888888888


Q ss_pred             CCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCC----CCCCCCcCCCCcccccccCChHHHHHH
Q psy8109         731 GDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA----DPDILDLKDTSPLLSSCRQGLYEIVDT  806 (1011)
Q Consensus       731 g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga----d~~~~d~~g~t~L~~A~~~g~~~iv~~  806 (1011)
                      |+ .+++++|++. |++.+.....+.++++.|...++.++++.+.....    ..+.......++|+.+...........
T Consensus        51 ~~-~~iv~~Ll~~-ga~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  128 (228)
T d1k1aa_          51 TL-PSVVRLLVTA-GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQL  128 (228)
T ss_dssp             TC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred             cc-cccccccccc-cccccccccccccccccccccccccchhhhhhccccccccccccccccccccccccccccchhhhh
Confidence            88 8888888887 88888888888888888888888888887766532    233445566788888888888888888


Q ss_pred             HHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccc
Q psy8109         807 LLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK  886 (1011)
Q Consensus       807 Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~  886 (1011)
                      |.....+........+.++|+.|+..+...+++.++++|.+++.+|..|.||||+|+..|+.++|++|+++|+|++.+|.
T Consensus       129 l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~  208 (228)
T d1k1aa_         129 LLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC  208 (228)
T ss_dssp             HHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred             hhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence            88888877666777899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCHHhhHHhhCCHHHHH
Q psy8109         887 YRMTFESSKVVEKHVAKLR  905 (1011)
Q Consensus       887 ~g~t~l~~a~~~~~~~~~~  905 (1011)
                      +|+||||+|++.|+.++++
T Consensus       209 ~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         209 HNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             TSCCTTTTCSSHHHHHHHT
T ss_pred             CCCCHHHHHHhCCCccccC
Confidence            9999999999999988875

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.1e-27  Score=242.53  Aligned_cols=188  Identities=27%  Similarity=0.383  Sum_probs=165.3

Q ss_pred             CCcHHHHHHHCCCHH----HHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCccccc
Q psy8109         720 YMTPLHYASYRGDCN----DIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSS  795 (1011)
Q Consensus       720 ~~t~l~~A~~~g~~~----~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A  795 (1011)
                      |.||||+|+..|+ .    ++++++... ++++|..|.+|+||||+|+..|+.+++++|+++|++++..+..|.|||+.|
T Consensus         2 G~t~Lh~A~~~g~-~~~~~~li~~~~~~-~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~   79 (221)
T d1iknd_           2 GDSFLHLAIIHEE-KALTMEVIRQVKGD-LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLA   79 (221)
T ss_dssp             CCCTTHHHHHTTC-SSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHH
T ss_pred             CChHHHHHHHcCC-HHHHHHHHHHHHhC-CCCcccCCCCCCccccccccccccccccccccccccccccccccccccccc
Confidence            8899999999998 4    444556566 889999999999999999999999999999999999999999999999999


Q ss_pred             ccCChHHHHHHHHHcCCCccc-----cccCCCChHHHHHHHcCCHHHHHHHHhccCCccccc-CCCCCHHHHHHHcCCHH
Q psy8109         796 CRQGLYEIVDTLLEYNADTNL-----RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED-KYGKIAFHSACQAKNWD  869 (1011)
Q Consensus       796 ~~~g~~~iv~~Ll~~g~~~~~-----~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d-~~g~taL~~A~~~g~~~  869 (1011)
                      +..++.++++.|+..+.....     .....|.||||.|+..|+.+++++|+..|+.++..+ .+|+||||+|+..|+.+
T Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~  159 (221)
T d1iknd_          80 CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD  159 (221)
T ss_dssp             HHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred             cccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHH
Confidence            999999999999998765432     234568899999999999999999999999998765 67999999999999999


Q ss_pred             HHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhh
Q psy8109         870 IVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANI  909 (1011)
Q Consensus       870 iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~  909 (1011)
                      +|++|+++|+|++.+|.+|+||||+|+..++.++++.+..
T Consensus       160 ~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~  199 (221)
T d1iknd_         160 LVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQ  199 (221)
T ss_dssp             HHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHT
T ss_pred             HHHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999987643

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=3.9e-26  Score=232.23  Aligned_cols=121  Identities=24%  Similarity=0.200  Sum_probs=61.7

Q ss_pred             CCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHc
Q psy8109         753 FNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFH  832 (1011)
Q Consensus       753 ~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~  832 (1011)
                      ..+.++.+.+.......+.+.|...+++++..+..|.|||+.|+..+...+++.|++.+.+++. .+..|.||||+|+..
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~-~d~~g~TpL~~A~~~  166 (209)
T d1ot8a_          88 HDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDA-QDDKDETPLFLAARE  166 (209)
T ss_dssp             TTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHT
T ss_pred             ccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccc-cccccccccchhccc
Confidence            3344444555555555555555555555555554555555555555555555555555554444 344455555555555


Q ss_pred             CCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHH
Q psy8109         833 NQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFL  874 (1011)
Q Consensus       833 g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~L  874 (1011)
                      |+.++|++|+++|+|++.+|..|+||||+|++.|+.+||++|
T Consensus       167 g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         167 GSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             cHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            555555555555555555555555555555555555555543

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=3.9e-26  Score=232.21  Aligned_cols=205  Identities=25%  Similarity=0.305  Sum_probs=186.7

Q ss_pred             HHHHHHHHhCCCCCCcc-CCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109         698 LDIIKMLVKYGADVNLT-NEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK  776 (1011)
Q Consensus       698 ~~iv~~Ll~~g~~~~~~-~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~  776 (1011)
                      .++|++|+++|++++.. +..  |.||||+||..|+ .+++++|+.. |++++.++..+.++++.++..++.........
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~--G~t~L~~A~~~g~-~e~v~~Ll~~-g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKT--GETSLHLAARFAR-ADAAKRLLDA-GADANSQDNTGRTPLHAAVAADAMGVFQILLR   77 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCcCcCcCCC--CCCHHHHHHHcCC-HHHHHHHHhh-cccccccccccccccccccccccccccccccc
Confidence            47888999999988764 566  9999999999999 9999999998 99999999999999999999999988877776


Q ss_pred             CCCC-CCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCC
Q psy8109         777 AGAD-PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYG  855 (1011)
Q Consensus       777 ~gad-~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g  855 (1011)
                      .... .......|.++.+.+.......+.+.|...+++++. .+..|.|||+.|+.+|..++++.|++.+++++..|..|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g  156 (209)
T d1ot8a_          78 NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINA-ADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKD  156 (209)
T ss_dssp             CTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred             ccccccccccccccccccccccccchhhhhhhhhhcccccc-cCCCCCCcchhhcccCcceeeeeecccccccccccccc
Confidence            5443 333455677888888888999999999999999987 78899999999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109         856 KIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA  907 (1011)
Q Consensus       856 ~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  907 (1011)
                      .||||+|+..|+.++|++|+++|+|++..|..|+||||+|++.|+.+++++|
T Consensus       157 ~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         157 ETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             ccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            9999999999999999999999999999999999999999999999999876

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-26  Score=234.48  Aligned_cols=191  Identities=23%  Similarity=0.286  Sum_probs=167.0

Q ss_pred             CcchHHHHHHHcCCH----HHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q psy8109         213 QGYKALCWALQEKKT----DIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIE  288 (1011)
Q Consensus       213 ~g~t~L~~Aa~~G~~----~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~  288 (1011)
                      +|.||||+|+..|+.    ++++++...|+++|..+.           .|+||||+|+..|+.+++++|++.|++++..+
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~-----------~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d   69 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-----------LQQTPLHLAVITNQPEIAEALLGAGCDPELRD   69 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCT-----------TCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCC
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCC-----------CCCccccccccccccccccccccccccccccc
Confidence            589999999999995    556667778999988877           89999999999999999999999999998877


Q ss_pred             cCCCCcHHHHHHHhCCHHHHHHHHHcCCCC----CCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCC-CCCCcH
Q psy8109         289 KSRNRTALHVAAIVESVDIVKLLFDYGAEK----SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGN-DDGCTP  363 (1011)
Q Consensus       289 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~----~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~-~~g~t~  363 (1011)
                      .. |.|||+.|+..|+.+++++|+..+...    ..+.....|.||||.|+..|+.+++++|+..|+.++..+ .+|.||
T Consensus        70 ~~-g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~  148 (221)
T d1iknd_          70 FR-GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTA  148 (221)
T ss_dssp             TT-CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH
T ss_pred             cc-cccccccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCc
Confidence            66 999999999999999999999986531    223445668999999999999999999999999988765 579999


Q ss_pred             HHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109         364 LFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI  415 (1011)
Q Consensus       364 L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~  415 (1011)
                      ||+|+..|+.+++++|+++|++++.. ..|.|||++|+..++.+++++|++..
T Consensus       149 L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~  201 (221)
T d1iknd_         149 LHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT  201 (221)
T ss_dssp             HHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTS
T ss_pred             cccccccccHHHHHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            99999999999999999999999988 78899999999999999999998864

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.5e-25  Score=227.57  Aligned_cols=214  Identities=26%  Similarity=0.312  Sum_probs=147.6

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHH----cCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHH
Q psy8109         292 NRTALHVAAIVESVDIVKLLFD----YGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCA  367 (1011)
Q Consensus       292 g~t~L~~Aa~~g~~~iv~~Ll~----~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A  367 (1011)
                      |.||||+||..|+.++|++|++    +|+  +++.+|..|+||||+|+..|+.++|++|+++|++++.....|.++++.|
T Consensus         3 G~TpLh~A~~~g~~~~v~~Ll~~~~~~g~--~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a   80 (228)
T d1k1aa_           3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGR--ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA   80 (228)
T ss_dssp             TCCHHHHHHHTTCHHHHHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHCCC--CCCccCCCCCccceehhcccccccccccccccccccccccccccccccc
Confidence            7778888877777777777764    566  6777777777777777777777777777777777777777777777777


Q ss_pred             HHcCChhHHHHHHhcCCCCCCC-----CCCCcHHHHHHhcCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHH
Q psy8109         368 IAQNCLEVFNYLVNHGCDLSVP-----EGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFH  442 (1011)
Q Consensus       368 ~~~g~~~iv~~Ll~~g~~~~~~-----~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~  442 (1011)
                      ...++.++++.+..........     ....++++.+...........|...                            
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~----------------------------  132 (228)
T d1k1aa_          81 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER----------------------------  132 (228)
T ss_dssp             HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT----------------------------
T ss_pred             cccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhcc----------------------------
Confidence            7777777777666543322111     2234555555555555544444432                            


Q ss_pred             HHHHcCCCc-ccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCccccccc
Q psy8109         443 SIIEAGADI-KAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKM  520 (1011)
Q Consensus       443 ~Ll~~g~~~-~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~  520 (1011)
                           ..+. ......+.++|+.|+..+...+++++++ +...+..+..|.|||++|+..|+.+++++|+++|++++.++
T Consensus       133 -----~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d  207 (228)
T d1k1aa_         133 -----GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN  207 (228)
T ss_dssp             -----TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred             -----ccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence                 2221 2233456777888888888888877777 56667777777888888888888888888888888888777


Q ss_pred             CCCCCHHHHHHHhCCHHHHH
Q psy8109         521 KSNFTCLHVACEFASIEMVS  540 (1011)
Q Consensus       521 ~~~~t~L~~A~~~g~~~iv~  540 (1011)
                      ..|.||||+|+..|+.++|+
T Consensus       208 ~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         208 CHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             TTSCCTTTTCSSHHHHHHHT
T ss_pred             CCCCCHHHHHHhCCCccccC
Confidence            77888888887777777764

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.93  E-value=2.4e-28  Score=268.03  Aligned_cols=181  Identities=14%  Similarity=0.152  Sum_probs=130.9

Q ss_pred             CCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHH---HHHcCCCCcccccCCCCcHHHHHHH
Q psy8109         225 KKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKL---LLEKGANPLAIEKSRNRTALHVAAI  301 (1011)
Q Consensus       225 G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~---Ll~~g~~~~~~~~~~g~t~L~~Aa~  301 (1011)
                      +..++.+.|...+++++............+...|.|||++||.+||.+++++   |++.|++++..+.. |+||||+||+
T Consensus        57 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~-g~taL~~Aa~  135 (346)
T d2ajaa1          57 NMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAE-NYQAFRLAAE  135 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTTTCTTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHH-HHHHHHHHHH
T ss_pred             cHHHHHHHHHHcchhhccchhhhhhHHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCC-CCCHHHHHHH
Confidence            3455666665555444433221111112233477899999999999887766   78899998888776 8999999999


Q ss_pred             hCCHHHHHHHHHcCCCCCCcccC--CCCCCHHHHHHhcCcHHHHHHHHHCCCCCcc---CCCCCCcHHHHHHHcCChhHH
Q psy8109         302 VESVDIVKLLFDYGAEKSVNVQN--VAGLTPLHIACRRKCLEIVKILLDKGADINS---GNDDGCTPLFCAIAQNCLEVF  376 (1011)
Q Consensus       302 ~g~~~iv~~Ll~~~~~~~~~~~~--~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~---~~~~g~t~L~~A~~~g~~~iv  376 (1011)
                      +||.++|++|+++|+  +++..+  ..|.||||+||.+||.++|++|++.|++...   .+..+.||++.|+.+|+.++|
T Consensus       136 ~G~~~~v~~Ll~~g~--~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv  213 (346)
T d2ajaa1         136 NGHLHVLNRLCELAP--TEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVI  213 (346)
T ss_dssp             TTCHHHHHHHHHSCT--TTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHH
T ss_pred             CCCHHHHHHHHHcCC--CccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHH
Confidence            999999999999998  566554  4688999999999999999999999876532   334567788888899999999


Q ss_pred             HHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy8109         377 NYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH  414 (1011)
Q Consensus       377 ~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~  414 (1011)
                      ++|++.|++++      ++.+.++..|+..++.+++..
T Consensus       214 ~~Ll~~ga~~~------~~~~~~~~~~~~~~~~~~~~~  245 (346)
T d2ajaa1         214 NFLLDCPVMLA------YAEIHEFEYGEKYVNPFIARH  245 (346)
T ss_dssp             HHHTTSHHHHH------HHHHCTTTTTTTTHHHHHHHH
T ss_pred             HHHHhCCCCcc------hHHHHHHHcCcHhhhHHHHHh
Confidence            99999988765      466666667777776666543

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.4e-25  Score=212.66  Aligned_cols=153  Identities=28%  Similarity=0.411  Sum_probs=120.0

Q ss_pred             cHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChH
Q psy8109         722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLY  801 (1011)
Q Consensus       722 t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~  801 (1011)
                      +|||+||..|+ .++|++|+++ |++++.+|..|.||||+|+ .|+.+++++|+++|++++..+..|.++|+.++..++.
T Consensus         3 ~~Lh~Aa~~g~-~~~v~~Ll~~-g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~   79 (156)
T d1ihba_           3 NELASAAARGD-LEQLTSLLQN-NVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL   79 (156)
T ss_dssp             HHHHHHHHHTC-HHHHHHHTTS-CCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             HHHHHHHHcCC-HHHHHHHHHC-CCCcCccCCcccccccccc-cccccccccccccccccccccccCccccccccccccc
Confidence            67788888887 7888888877 7788877778888887664 6778888888888888877777778888888888888


Q ss_pred             HHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccC-CcccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109         802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA-DINAEDKYGKIAFHSACQAKNWDIVTFLLDAG  878 (1011)
Q Consensus       802 ~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga-~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g  878 (1011)
                      +.+++|+..+.+++. .+..|.+|||.|+..|+.+++++|+++|+ +++.+|..|.||||+|+..|+.++|++|+++|
T Consensus        80 ~~~~~l~~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          80 DTLQTLLEFQADVNI-EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             ccccccccccccccc-cccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            888888887777776 66777788888888888888888777765 67777777888888888888888888887776

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.92  E-value=1.6e-26  Score=253.41  Aligned_cols=153  Identities=12%  Similarity=0.074  Sum_probs=121.0

Q ss_pred             CCCCcchHHHHHHHcCCHHHHHH---HHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy8109         210 SHSQGYKALCWALQEKKTDIAKL---LVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLA  286 (1011)
Q Consensus       210 ~~~~g~t~L~~Aa~~G~~~iv~~---Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~  286 (1011)
                      .+..|.|+|++||++||.+++++   |++.|++++..+.           .|.||||+||..||+++|++|++.|++++.
T Consensus        86 ~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~-----------~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~  154 (346)
T d2ajaa1          86 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA-----------ENYQAFRLAAENGHLHVLNRLCELAPTEIM  154 (346)
T ss_dssp             HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CH-----------HHHHHHHHHHHTTCHHHHHHHHHSCTTTHH
T ss_pred             ccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCC-----------CCCCHHHHHHHCCCHHHHHHHHHcCCCccc
Confidence            35688999999999999887766   7889999998887           889999999999999999999999999877


Q ss_pred             ccc-CCCCcHHHHHHHhCCHHHHHHHHHcCCCC-CCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHH
Q psy8109         287 IEK-SRNRTALHVAAIVESVDIVKLLFDYGAEK-SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPL  364 (1011)
Q Consensus       287 ~~~-~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~-~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L  364 (1011)
                      .+. ..|.||||+||..||.++|++|+++|+.. ..+..+..+.||++.|+.+||.++|++|++.|++++.       +.
T Consensus       155 ~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~-------~~  227 (346)
T d2ajaa1         155 AMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY-------AE  227 (346)
T ss_dssp             HHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHH-------HH
T ss_pred             cccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcch-------HH
Confidence            643 23899999999999999999999998732 2234455677889999999999999999999987653       44


Q ss_pred             HHHHHcCChhHHHHHH
Q psy8109         365 FCAIAQNCLEVFNYLV  380 (1011)
Q Consensus       365 ~~A~~~g~~~iv~~Ll  380 (1011)
                      +.++..|+..+..+++
T Consensus       228 ~~~~~~~~~~~~~~~~  243 (346)
T d2ajaa1         228 IHEFEYGEKYVNPFIA  243 (346)
T ss_dssp             HCTTTTTTTTHHHHHH
T ss_pred             HHHHHcCcHhhhHHHH
Confidence            4444455544444443

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.5e-24  Score=208.84  Aligned_cols=153  Identities=25%  Similarity=0.322  Sum_probs=137.8

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcH
Q psy8109         216 KALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTA  295 (1011)
Q Consensus       216 t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~  295 (1011)
                      ++||+||..|+.++|++|+++|++++..+.           .|.||||+|+ .|+.+++++|+++|++++..+.. +.++
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~-----------~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~-~~~~   69 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNG-----------FGRTALQVMK-LGNPEIARRLLLRGANPDLKDRT-GFAV   69 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCT-----------TSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTT-SCCH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCC-----------cccccccccc-ccccccccccccccccccccccc-Cccc
Confidence            899999999999999999999999988877           8899999775 78999999999999998877766 8899


Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCC-CCccCCCCCCcHHHHHHHcCChh
Q psy8109         296 LHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGA-DINSGNDDGCTPLFCAIAQNCLE  374 (1011)
Q Consensus       296 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga-~~n~~~~~g~t~L~~A~~~g~~~  374 (1011)
                      ++.++..|+.+++.+|+.++.  +++..+..|.+||++|+..|+.+++++|+++|+ +++.++..|.||||+|+..|+.+
T Consensus        70 l~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~  147 (156)
T d1ihba_          70 IHDAARAGFLDTLQTLLEFQA--DVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE  147 (156)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             ccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHH
Confidence            999999999999999999888  678888999999999999999999999998886 78888899999999999999999


Q ss_pred             HHHHHHhcC
Q psy8109         375 VFNYLVNHG  383 (1011)
Q Consensus       375 iv~~Ll~~g  383 (1011)
                      +|++|+++|
T Consensus       148 iv~~Ll~~G  156 (156)
T d1ihba_         148 VVSLMQANG  156 (156)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHhcC
Confidence            999999887

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.3e-24  Score=207.34  Aligned_cols=152  Identities=26%  Similarity=0.317  Sum_probs=106.2

Q ss_pred             cHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChH
Q psy8109         722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLY  801 (1011)
Q Consensus       722 t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~  801 (1011)
                      .+|+.||..|+ .++|++|++..+++++..|..|+||||+|+ .|+.+++++|++++++++..+..|.+|++.++..++.
T Consensus         4 ~~L~~Aa~~g~-~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~   81 (156)
T d1bd8a_           4 DRLSGAAARGD-VQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL   81 (156)
T ss_dssp             HHHHHHHHHTC-HHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             HHHHHHHHcCC-HHHHHHHHHhCCCCCCccCCCCCccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            34677777777 667776666656677777777777777664 3666777777777777777776777777777777777


Q ss_pred             HHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy8109         802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDA  877 (1011)
Q Consensus       802 ~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~  877 (1011)
                      +++++++++|++++. .+..|.||||+|+..|+.+++++|+ .|++++.+|..|+||||+|+..|+.+++++|++|
T Consensus        82 ~~~~~~l~~~~~~n~-~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          82 DTLKVLVEHGADVNV-PDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccc-ccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            777777777777766 5566777777777777777777665 4667777777777777777777777777777664

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-23  Score=202.21  Aligned_cols=152  Identities=24%  Similarity=0.343  Sum_probs=125.6

Q ss_pred             chHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Q psy8109         215 YKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNR  293 (1011)
Q Consensus       215 ~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~  293 (1011)
                      .+.|+.||..|+.++|++|++. |++++..+.           .|.||||.|+ .|+.++|++|++++.+++..... |.
T Consensus         3 g~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~-----------~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~-~~   69 (156)
T d1bd8a_           3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNR-----------FGKTALQVMM-FGSTAIALELLKQGASPNVQDTS-GT   69 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCT-----------TSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTT-SC
T ss_pred             cHHHHHHHHcCCHHHHHHHHHhCCCCCCccCC-----------CCCccccccc-ccccccccccccccccccccccc-cc
Confidence            3568888888888888888875 677777666           7888888776 47888888888888888776655 88


Q ss_pred             cHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCh
Q psy8109         294 TALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCL  373 (1011)
Q Consensus       294 t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~  373 (1011)
                      +|++.|+..++.+++++++++|+  +++.++..|.||||+|+..|+.+++++|+ .|++++..|..|.||||+|+..|+.
T Consensus        70 ~~l~~~~~~~~~~~~~~~l~~~~--~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~  146 (156)
T d1bd8a_          70 SPVHDAARTGFLDTLKVLVEHGA--DVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQ  146 (156)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCH
T ss_pred             ccccccccccccccccccccccc--ccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCH
Confidence            88888888888888888888887  67888888888888888888888888777 6788888888888888888888888


Q ss_pred             hHHHHHHhc
Q psy8109         374 EVFNYLVNH  382 (1011)
Q Consensus       374 ~iv~~Ll~~  382 (1011)
                      +++++|+++
T Consensus       147 ~iv~~Ll~h  155 (156)
T d1bd8a_         147 DLVDILQGH  155 (156)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHhh
Confidence            888888875

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=3e-23  Score=198.88  Aligned_cols=150  Identities=29%  Similarity=0.375  Sum_probs=124.2

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCc
Q psy8109         215 YKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRT  294 (1011)
Q Consensus       215 ~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t  294 (1011)
                      .|||+.||+.|+.++|++|+++|++++. +.           .|.||||+|+..++.+++..++............ +.+
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~~-~~-----------~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   69 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFTT-DW-----------LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV-DRT   69 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCCC-CT-----------TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT-CCC
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCccc-cc-----------CCCccccccccccccccccccccccccccccccc-ccc
Confidence            4888888888888888888888887652 33           6788888888888888888888877666544444 778


Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChh
Q psy8109         295 ALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLE  374 (1011)
Q Consensus       295 ~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~  374 (1011)
                      +++.++...+.+++++++.+++  +++.++..|+||||+|+..|+.++|++|+++|++++..|..|.|||++|+.+|+.+
T Consensus        70 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~e  147 (153)
T d1awcb_          70 PLHMAASEGHANIVEVLLKHGA--DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNED  147 (153)
T ss_dssp             HHHHHHHHTCHHHHHHHHTTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             ccccccccccceeeecccccCC--ccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHH
Confidence            8888888888888888888887  67778888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHH
Q psy8109         375 VFNYL  379 (1011)
Q Consensus       375 iv~~L  379 (1011)
                      ++++|
T Consensus       148 iv~lL  152 (153)
T d1awcb_         148 LAEIL  152 (153)
T ss_dssp             HHHHH
T ss_pred             HHHhC
Confidence            88876

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=8.3e-24  Score=202.86  Aligned_cols=150  Identities=25%  Similarity=0.305  Sum_probs=125.9

Q ss_pred             ccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCH
Q psy8109         756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQL  835 (1011)
Q Consensus       756 ~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~  835 (1011)
                      .|||+.|+..|+.++|++||++|++++ .+..|.||||+|+..++.++++.++........ ....+.++++.++...+.
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTCH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccccccccccccc-cccccccccccccccccc
Confidence            478888888888888888888888776 577888888888888888888888887776654 556777888888888888


Q ss_pred             HHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109         836 DIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA  907 (1011)
Q Consensus       836 ~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  907 (1011)
                      +++++|+.+|++++.+|..|+||||+|+..|+.++|++|+++|++++..|.+|.|||++|+.+|+.++++.+
T Consensus        81 ~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            888888888888888888888888888888888888888888888888888888888888888888888765

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.6e-23  Score=190.71  Aligned_cols=121  Identities=22%  Similarity=0.301  Sum_probs=112.5

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCC
Q psy8109         755 NRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQ  834 (1011)
Q Consensus       755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~  834 (1011)
                      +.++||.|+..|+.++|++|+++|++++.++..|.||||.|+ .|+.++|++|+++|++++......+.||||+|+..|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            568999999999999999999999999999999999999775 6999999999999999998444444579999999999


Q ss_pred             HHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHh
Q psy8109         835 LDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD  876 (1011)
Q Consensus       835 ~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~  876 (1011)
                      .++|++|+++|++++.+|..|+||||+|++.|+.++|++|++
T Consensus        82 ~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          82 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999999999999999999999999999999985

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.8e-22  Score=182.85  Aligned_cols=119  Identities=30%  Similarity=0.357  Sum_probs=71.8

Q ss_pred             ChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCC-CHHHHHHhc
Q psy8109         259 DTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGL-TPLHIACRR  337 (1011)
Q Consensus       259 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~-t~L~~Aa~~  337 (1011)
                      .++||.|+..|++++|++|+++|++++..+.. |.||||.|+ .|+.++|++|+++|+  +++..+..+. ||||+|+..
T Consensus         4 ~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~-g~t~l~~a~-~g~~~~v~~Ll~~ga--~~~~~~~~~~~~~L~~A~~~   79 (125)
T d1bi7b_           4 ADWLATAAARGRVEEVRALLEAGANPNAPNSY-GRRPIQVMM-MGSARVAELLLLHGA--EPNCADPATLTRPVHDAARE   79 (125)
T ss_dssp             TTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSS-SCCTTTSSC-TTCHHHHHHHHTTTC--CCCCCCTTTCCCHHHHHHHH
T ss_pred             hhHHHHHHHCCCHHHHHHHHHcCCcccccccc-ccccccccc-ccccccccccccccc--cccccccccccccccccccc
Confidence            35566666666666666666666665555444 566665443 466666666666665  4555555544 466666666


Q ss_pred             CcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHh
Q psy8109         338 KCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVN  381 (1011)
Q Consensus       338 g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~  381 (1011)
                      |+.++|++|+++|++++..|..|+||||+|+..|+.+++++|++
T Consensus        80 g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          80 GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            66666666666666666666666666666666666666666654

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=5.7e-23  Score=186.10  Aligned_cols=106  Identities=27%  Similarity=0.288  Sum_probs=75.3

Q ss_pred             CcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHH
Q psy8109         790 SPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWD  869 (1011)
Q Consensus       790 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~  869 (1011)
                      |||++|++.|+.++|++|+++|++++. .+..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~n~-~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCCCC-CSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             hHHHHHHHCCCHHHHHHHHHhhhcccc-ccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            566666666666666666666666665 5566777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHhcCCCcccccccCCCHHhhHH
Q psy8109         870 IVTFLLDAGSNIEKATKYRMTFESSKV  896 (1011)
Q Consensus       870 iv~~Ll~~ga~~~~~~~~g~t~l~~a~  896 (1011)
                      +|++|+++|++++.+|.+|.|||++|.
T Consensus        83 ~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          83 CVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             HHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhhcccccceeeCCCCCCHHHHHh
Confidence            777777777777777777777777663

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=3.7e-22  Score=214.39  Aligned_cols=183  Identities=17%  Similarity=0.122  Sum_probs=119.1

Q ss_pred             CCCCCCcc-CCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC-------HHHHHHHHHCC
Q psy8109         707 YGADVNLT-NEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN-------LDLLKFLLKAG  778 (1011)
Q Consensus       707 ~g~~~~~~-~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~-------~~iv~~Ll~~g  778 (1011)
                      .+.+++.. +..  |.||||+||..|+ .++|++|++. |++++.+|..|+||||.|+..++       .+++++|..  
T Consensus        95 ~~~dvn~~~D~~--G~T~LH~Aa~~g~-~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~--  168 (301)
T d1sw6a_          95 TQLNLNIPVDEH--GNTPLHWLTSIAN-LELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP--  168 (301)
T ss_dssp             SCCCSCSCCSTT--CCCHHHHHHHTTC-HHHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG--
T ss_pred             cCCCcCcCcCCC--CCCHHHHHHHcCC-HHHHHHHHHC-CCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh--
Confidence            45555543 444  7788888888887 7788888877 77888777778888888776654       244444432  


Q ss_pred             CCCCCCCcCCCCcccccccCCh------------HHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHH---h
Q psy8109         779 ADPDILDLKDTSPLLSSCRQGL------------YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLL---K  843 (1011)
Q Consensus       779 ad~~~~d~~g~t~L~~A~~~g~------------~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll---~  843 (1011)
                       .++.+|..|+||||.++..+.            ..++.+++..+..........+.++++.+.......++..+.   .
T Consensus       169 -~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (301)
T d1sw6a_         169 -CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI  247 (301)
T ss_dssp             -GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHH
T ss_pred             -hhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHH
Confidence             345566777788876654332            224556666666554445556666777666555444444322   1


Q ss_pred             ccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHH
Q psy8109         844 YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKV  896 (1011)
Q Consensus       844 ~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~  896 (1011)
                      .+..+|.+|..|+||||+|++.|+.++|++|+++||+++..|+.|.|||++|+
T Consensus       248 ~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         248 IANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            13347889999999999999999999999999999999999999999999985

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=8.8e-23  Score=184.84  Aligned_cols=107  Identities=27%  Similarity=0.290  Sum_probs=102.5

Q ss_pred             ccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCH
Q psy8109         756 RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQL  835 (1011)
Q Consensus       756 ~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~  835 (1011)
                      .|||++|+..|+.++|++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++. .+..|+||||+|+.+|+.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~-~d~~g~tpLh~A~~~~~~   81 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAVYEGHV   81 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTC-CSSSCSCHHHHHHTTTCC
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeee-cccccccchhhhhhcCch
Confidence            4799999999999999999999999999999999999999999999999999999999997 788999999999999999


Q ss_pred             HHHHHHHhccCCcccccCCCCCHHHHHH
Q psy8109         836 DIIKLLLKYNADINAEDKYGKIAFHSAC  863 (1011)
Q Consensus       836 ~iv~~Ll~~ga~in~~d~~g~taL~~A~  863 (1011)
                      ++|++|+++|++++.+|..|+||||+|.
T Consensus        82 ~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          82 SCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             HHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhhhcccccceeeCCCCCCHHHHHh
Confidence            9999999999999999999999999984

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.2e-21  Score=180.62  Aligned_cols=120  Identities=22%  Similarity=0.256  Sum_probs=86.0

Q ss_pred             cHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHH
Q psy8109         757 TALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLD  836 (1011)
Q Consensus       757 t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~  836 (1011)
                      ++|+.|+..|+.++|++|+++|+|++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|+||||+|+.+|+.+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~-~d~~g~tpLh~A~~~g~~~   81 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNNVQ   81 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCcccccccccccccccccccccccccccccccccccc-ccccCcccccccchhhHHH
Confidence            467777777777777777777777777777777777777777777777777777777776 6667777777777777777


Q ss_pred             HHHHHHhccCCcccccC-CCCCHHHHH--HHcCCHHHHHHHHhc
Q psy8109         837 IIKLLLKYNADINAEDK-YGKIAFHSA--CQAKNWDIVTFLLDA  877 (1011)
Q Consensus       837 iv~~Ll~~ga~in~~d~-~g~taL~~A--~~~g~~~iv~~Ll~~  877 (1011)
                      +|++|+++|++++..+. .|.||+++|  ++.|+.++|++|++.
T Consensus        82 ~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          82 VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             HHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            77777777777776553 466665554  456677777777754

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.2e-21  Score=175.42  Aligned_cols=120  Identities=25%  Similarity=0.354  Sum_probs=94.8

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCc
Q psy8109         260 TPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKC  339 (1011)
Q Consensus       260 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~  339 (1011)
                      ++|+.||..|++++|++|+++|++++..+.. |+||||+|+..|+.+++++|+++|+  +++.+|..|+||||+|+.+|+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~-g~t~Lh~A~~~~~~~~~~~ll~~g~--~~~~~d~~g~tpLh~A~~~g~   79 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE-GITALHNAVCAGHTEIVKFLVQFGV--NVNAADSDGWTPLHCAASCNN   79 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTT-SCCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTTCCCHHHHHHHTTC
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccc-ccccccccccccccccccccccccc--ccccccccCcccccccchhhH
Confidence            5688888888888888888888888777665 8888888888888888888888887  677788888888888888888


Q ss_pred             HHHHHHHHHCCCCCccCCC-CCCcHHHHH--HHcCChhHHHHHHhc
Q psy8109         340 LEIVKILLDKGADINSGND-DGCTPLFCA--IAQNCLEVFNYLVNH  382 (1011)
Q Consensus       340 ~~iv~~Ll~~ga~~n~~~~-~g~t~L~~A--~~~g~~~iv~~Ll~~  382 (1011)
                      .++|++|+++|++++..+. .+.||++++  +..|+.+++++|++.
T Consensus        80 ~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          80 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            8888888888888876653 466766554  466778888887764

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=1.5e-20  Score=201.57  Aligned_cols=186  Identities=20%  Similarity=0.198  Sum_probs=117.0

Q ss_pred             CCccc-CCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC-------hhHHHHHHhcCCCCCCCC
Q psy8109         319 SVNVQ-NVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNC-------LEVFNYLVNHGCDLSVPE  390 (1011)
Q Consensus       319 ~~~~~-~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~-------~~iv~~Ll~~g~~~~~~~  390 (1011)
                      ++|.. |..|+||||+||..|+.++|++|+++|++++..|..|+||||.||..|+       .+++++|.......+  .
T Consensus        98 dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d--~  175 (301)
T d1sw6a_          98 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED--S  175 (301)
T ss_dssp             CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC--T
T ss_pred             CcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhcc--c
Confidence            55654 7888888888888888888888888888888888888888888887664       244555544322211  4


Q ss_pred             CCCcHHHHHHhcC----CHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCc-ccccCCCChHHHHH
Q psy8109         391 GERTALHMASQFG----NLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADI-KAKLMDGTTALHLA  465 (1011)
Q Consensus       391 ~~~t~L~~Aa~~g----~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~-~~~~~~g~t~L~~A  465 (1011)
                      .++||||.++..+    ...++++.++                         .++.++...+... ......+.++++.+
T Consensus       176 ~g~t~lh~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~  230 (301)
T d1sw6a_         176 MNRTILHHIIITSGMTGCSAAAKYYLD-------------------------ILMGWIVKKQNRPIQSGTNEKESKPNDK  230 (301)
T ss_dssp             TCCCHHHHHHHHHTSTTCHHHHHHHHH-------------------------HHHHHHHHGGGCCEEEC-----------
T ss_pred             ccCCHHHHHHHHhCccccHHHHHHHHH-------------------------HHHHHHHhcCCcchhcccccccchhHHH
Confidence            4567777666433    3344443322                         1233444443322 22333344555554


Q ss_pred             HHcCCHHHHHHHHh----ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHH
Q psy8109         466 CYFGNLAMVNYLVK----HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVAC  531 (1011)
Q Consensus       466 a~~g~~~iv~~Ll~----~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~  531 (1011)
                      .......++..+..    ...+|.+|..|+||||+|++.|+.++|++|++.|++++..+..|.|||++|+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         231 NGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             -----CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HhcchHHHHHHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            44443333332211    2346888999999999999999999999999999999999999999999875

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=8e-20  Score=172.71  Aligned_cols=122  Identities=25%  Similarity=0.237  Sum_probs=101.6

Q ss_pred             HHHHHHhCCCHHHHHHHHHCCCCCCCC------CcCCCCccccccc---CChHHHHHHHHHcCCCccccccCCCChHHHH
Q psy8109         758 ALNFAAFGNNLDLLKFLLKAGADPDIL------DLKDTSPLLSSCR---QGLYEIVDTLLEYNADTNLRTIKHGSTALHT  828 (1011)
Q Consensus       758 ~L~~Aa~~g~~~iv~~Ll~~gad~~~~------d~~g~t~L~~A~~---~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~  828 (1011)
                      .|..|+..+++..+..++..|+|++..      +..|.||||+|+.   .|+.++|++|+++|++++. .+..|+||||+
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~-~d~~g~TpLh~   87 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-QTGKGSTALHY   87 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-CCTTCCCHHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhh-hhhhhcccccc
Confidence            455677888888888888888876654      5678888888885   4678888888888888887 77788899999


Q ss_pred             HHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109         829 AAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN  880 (1011)
Q Consensus       829 Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~  880 (1011)
                      |+..|+.++|++|+++|++++.+|..|+||||+|++.|+.+++++|++.++.
T Consensus        88 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          88 CCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             ccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence            9999999999999998999988888999999999999999999999887654

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=5.2e-19  Score=167.03  Aligned_cols=124  Identities=27%  Similarity=0.280  Sum_probs=110.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCccc-----ccCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCCcccCCCCCCHH
Q psy8109         260 TPLHSAILNSDIELVKLLLEKGANPLAI-----EKSRNRTALHVAAIV---ESVDIVKLLFDYGAEKSVNVQNVAGLTPL  331 (1011)
Q Consensus       260 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----~~~~g~t~L~~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L  331 (1011)
                      ..|..|+..+++..+..++..|+++...     .+..|+||||+|+..   |+.++|++|+++|+  +++.+|..|+|||
T Consensus         8 ~~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga--din~~d~~g~TpL   85 (154)
T d1dcqa1           8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG--NLDKQTGKGSTAL   85 (154)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS--CTTCCCTTCCCHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCC--Chhhhhhhhcccc
Confidence            3577899999999999999999876544     134489999999975   67899999999998  7899999999999


Q ss_pred             HHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCC
Q psy8109         332 HIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD  385 (1011)
Q Consensus       332 ~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  385 (1011)
                      |+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|++.+..
T Consensus        86 h~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          86 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             ccccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence            999999999999999999999999999999999999999999999999997654