Psyllid ID: psy8167

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MEILQNVQNHFVSGKKNSTSVENSTSVENSTSVENTSSVDNRTSVGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSITVYLT
Secondary Structure (PSIPRED)
cccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccHHcHHccccccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccHcccHccccccccEEEEEEccccccccccccHHHHHHEEEccccccccccHHcccccccEEEEEEEcccccccEEEEEEEc
Coil and Loop (DISEMBL)
MEILQNVQNHfvsgkknstsVENSTSvenstsventssvdnrtsvgpvvpidripctlcdktftrkDSLKKHIRIFhtqnqpqhTNVIEVALGARANAAFIDRIRCelcdksftrkdslkkhnrifhggadpklmDEQMARGSADFLEVVLnedgegepVSITVYLT
Flexible Loop (DISEMBL)
meilqnvqnhfvsgkknstsvenstsvenstsventssvdnrtsvgpvvpidripctlcdKTFTRKDSLKKHIRifhtqnqpqhtNVIEVALGARANAAFIDRIRCELCDKSftrkdslkkhnrifhggadpkLMDEQMARGSADFLEVvlnedgegepvsitvylt
Low Complexity Region (SEG)
MEILQNVQNHFVSGKKNSTSVENSTSVENSTSVENTSSVDNRTSVGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSITVYLT
Disordered region (IsUnstruct)
********************************************VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKD*L***NRIF*******************FLEVVL****************
Disordered Region (DISOPRED)
**ILQNVQNHFVSGKKNSTSVENSTSVE**********VDNRTSVGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSITVYLT
Disordered Region (DISEMBL)
MEILQNVQNHFVSG**************************NRTSVGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSITVYLT
Disordered Region (DISPRO)
MEILQNVQNHFV**************************************IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSITVYLT
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEILQNVQNHFVSGKKNSTSVENSTSVENSTSVENTSSVDNRTSVGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSITVYLT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	167	2.2.26 [Sep-21-2011]
Q8N4W9	903	Zinc finger protein 808 O	yes	N/A	0.479	0.088	0.404	3e-09
Q6ZNG1	722	Zinc finger protein 600 O	no	N/A	0.449	0.103	0.404	1e-08
Q9N658	541	Zinc finger protein sens	no	N/A	0.455	0.140	0.352	6e-06
Q5R5U3	672	Zinc finger protein 271 O	no	N/A	0.479	0.119	0.348	7e-06
Q8TF47	636	Zinc finger protein 90 ho	no	N/A	0.449	0.117	0.416	9e-06
Q3B7M4	630	Zinc finger protein 746 O	no	N/A	0.443	0.117	0.360	9e-06
P52741	427	Zinc finger protein 134 O	no	N/A	0.479	0.187	0.359	1e-05
Q0VGE8	651	Zinc finger protein 816 O	no	N/A	0.449	0.115	0.357	1e-05
Q4VBD9	706	GDNF-inducible zinc finge	no	N/A	0.425	0.100	0.386	1e-05
D3ZUU2	707	GDNF-inducible zinc finge	no	N/A	0.425	0.100	0.386	1e-05

>sp|Q8N4W9|ZN808_HUMAN Zinc finger protein 808 OS=Homo sapiens GN=ZNF808 PE=2 SV=2

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CT+CDK F R   L +HIRI HT  +P   N    A   +++ +   RI       +CE 
Sbjct: 793 CTVCDKAFVRNSYLARHIRI-HTAEKPYKCNECGKAFNEQSHLSRHHRIHTGEKPYKCEA 851

Query: 109 CDKSFTRKDSLKKHNRIFHGGADPKLMDE 137
           CDK F+RK  LK+H RI H G  P   +E
Sbjct: 852 CDKVFSRKSHLKRH-RIIHTGEKPYKCNE 879

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q6ZNG1|ZN600_HUMAN Zinc finger protein 600 OS=Homo sapiens GN=ZNF600 PE=1 SV=2

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CT+CDK F R   L +H RI HT  +P   N    A   ++  +   RI       +CE 
Sbjct: 584 CTVCDKAFVRNSYLARHTRI-HTAEKPYKCNECGKAFNQQSQLSLHHRIHAGEKLYKCET 642

Query: 109 CDKSFTRKDSLKKHNRIFHGGADP 132
           CDK F+RK  LK+H RI H G  P
Sbjct: 643 CDKVFSRKSHLKRHRRI-HPGKKP 665

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9N658|GFI1_DROME Zinc finger protein sens OS=Drosophila melanogaster GN=sens PE=1 SV=1

 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 12/88 (13%)

Query: 54  IPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIR-------- 105
            PC  C K F +K  +KKH  I HT  +P    V   A    +N   I  +R        
Sbjct: 441 YPCQYCGKRFHQKSDMKKHTYI-HTGEKPHKCTVCLKAFSQSSN--LITHMRKHTGYKPF 497

Query: 106 -CELCDKSFTRKDSLKKHNRIFHGGADP 132
            C LCD+SF RK  L++H    H  A P
Sbjct: 498 GCHLCDQSFQRKVDLRRHRESRHEEAPP 525

Transcription factor both necessary and sufficient for proper development of most cell types of the embryonic and adult peripheral nervous system (PNS). Essential component of the proneural Notch signaling pathway required for proper sensory organ precursor (SOP) differentiation. Correct expression requires expression of scalloped (sd). Repression of rough (ro) in R8 photoreceptor is an essential mechanism of R8 cell fate determination.

Drosophila melanogaster (taxid: 7227)

>sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 OS=Pongo abelii GN=ZNF271 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 9/89 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIR-------CEL 108
           C  CDK+F++   L KH R+ H+  +P H N  E A    ++     RI        C  
Sbjct: 445 CNQCDKSFSQSSDLTKHQRV-HSGEKPYHCNSCEKAFSQSSDLILHQRIHTGEKPYLCTQ 503

Query: 109 CDKSFTRKDSLKKHNRIFHGGADPKLMDE 137
           C KSF++   L KH RI H G  P    E
Sbjct: 504 CSKSFSQNSDLIKHQRI-HTGEKPYKCSE 531

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q8TF47|ZFP90_HUMAN Zinc finger protein 90 homolog OS=Homo sapiens GN=ZFP90 PE=2 SV=2

 Score = 49.7 bits (117), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 42/84 (50%), Gaps = 9/84 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVA------LGARANAAFIDR-IRCEL 108
           CT C KTF  K  L +H RI HT  +P   NV   A      LG   NA   ++  +C L
Sbjct: 256 CTDCGKTFLWKTQLTEHQRI-HTGEKPFECNVCGKAFRHSSSLGQHENAHTGEKPYQCSL 314

Query: 109 CDKSFTRKDSLKKHNRIFHGGADP 132
           C K+F R  SL +H RI H G  P
Sbjct: 315 CGKAFQRSSSLVQHQRI-HTGEKP 337

May function as a repressor or silencer protein, and most likely exerts its repressing activity upon zinc-dependent binding to DNA. May be involved in proper spermatogenesis by repressing the expression of genes unnecessary or incompatible with the maintenance of a haploid cell state.

Homo sapiens (taxid: 9606)

>sp|Q3B7M4|ZN746_BOVIN Zinc finger protein 746 OS=Bos taurus GN=ZNF746 PE=2 SV=1

 Score = 49.7 bits (117), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 12/86 (13%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIR---------C 106
           C  C + FTR   L +H R+ HT  +P      E     R+    ID  R         C
Sbjct: 498 CGECGRCFTRPAHLIRH-RMLHTGERPFPCTECEKRFTERSK--LIDHYRTHTGVRPFTC 554

Query: 107 ELCDKSFTRKDSLKKHNRIFHGGADP 132
            +C KSF RKD L+KH R    GA P
Sbjct: 555 TVCGKSFIRKDHLRKHQRNHAAGAKP 580

Transcription repressor that specifically binds to the 5'-TATTTT[T/G]-3' consensus sequence on promoters and repress transcription of PGC-1-alpha (PPARGC1A), thereby playing a role in regulation of neuron death.

Bos taurus (taxid: 9913)

>sp|P52741|ZN134_HUMAN Zinc finger protein 134 OS=Homo sapiens GN=ZNF134 PE=2 SV=2

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 9/89 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIR-------CEL 108
           C+ C K F+RKD+L +H RI H+  +P   +    A   +A      RI        C  
Sbjct: 178 CSECGKAFSRKDTLVQHQRI-HSGEKPYECSECGKAFSRKATLVQHQRIHTGERPYECSE 236

Query: 109 CDKSFTRKDSLKKHNRIFHGGADPKLMDE 137
           C K+F+RKD+L +H RI H G  P   +E
Sbjct: 237 CGKTFSRKDNLTQHKRI-HTGEMPYKCNE 264

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q0VGE8|ZN816_HUMAN Zinc finger protein 816 OS=Homo sapiens GN=ZNF816 PE=2 SV=2

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 9/84 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           C  C ++F+RK SL+ H    HT  +P   N        R N A   R+       +CE 
Sbjct: 455 CNKCGRSFSRKSSLQYH-HTLHTGEKPYTCNECGKVFSRRENLARHHRLHAGEKPYKCEE 513

Query: 109 CDKSFTRKDSLKKHNRIFHGGADP 132
           CDK F+R+  L++H RI H G  P
Sbjct: 514 CDKVFSRRSHLERHRRI-HTGEKP 536

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q4VBD9|GZF1_MOUSE GDNF-inducible zinc finger protein 1 OS=Mus musculus GN=Gzf1 PE=1 SV=2

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 17/88 (19%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGAR--ANAAFIDRIRC------- 106
           CT CD  F++  +LK H+R+ HT  +P     +    GAR   N   I   RC       
Sbjct: 435 CTKCDAKFSQPSALKTHLRV-HTGERP----FVCDECGARFTQNHMLIYHKRCHTGERPF 489

Query: 107 --ELCDKSFTRKDSLKKHNRIFHGGADP 132
             E C KSF  K+ LK HNRI H G+ P
Sbjct: 490 MCETCGKSFASKEYLKHHNRI-HTGSKP 516

Transcriptional repressor. Binds the GZF1 responsive element (GRE) (consensus: 5'-TGCGCN[TG][CA]TATA-3'). May be regulating VSX2/HOX10 expression.

Mus musculus (taxid: 10090)

>sp|D3ZUU2|GZF1_RAT GDNF-inducible zinc finger protein 1 OS=Rattus norvegicus GN=Gzf1 PE=3 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 17/88 (19%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGAR--ANAAFIDRIRC------- 106
           CT CD  F++  +LK H+R+ HT  +P     +    GAR   N   I   RC       
Sbjct: 436 CTKCDAKFSQPSALKTHLRV-HTGERP----FVCDECGARFTQNHMLIYHKRCHTGERPF 490

Query: 107 --ELCDKSFTRKDSLKKHNRIFHGGADP 132
             E C KSF  K+ LK HNRI H G+ P
Sbjct: 491 MCETCGKSFASKEYLKHHNRI-HTGSKP 517

Transcriptional repressor. Binds the GZF1 responsive element (GRE) (consensus: 5'-TGCGCN[TG][CA]TATA-3'). May be regulating VSX2/HOX10 expression.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
114678881	887	PREDICTED: zinc finger protein 808 isofo	0.479	0.090	0.404	1e-07
397469974	834	PREDICTED: zinc finger protein 808-like	0.479	0.095	0.404	1e-07
226291631	756	C2H2 transcription factor (Seb1) [Paraco	0.491	0.108	0.316	1e-07
157167158	903	zinc finger protein 808 [Homo sapiens] g	0.479	0.088	0.404	1e-07
225679868	760	conserved hypothetical protein [Paracocc	0.491	0.107	0.316	1e-07
51491284	834	hypothetical protein [Homo sapiens]	0.479	0.095	0.404	2e-07
402912561	791	PREDICTED: zinc finger protein 600 isofo	0.449	0.094	0.416	2e-07
297278339	955	PREDICTED: zinc finger protein 845-like	0.449	0.078	0.416	2e-07
355703862	721	hypothetical protein EGK_10998 [Macaca m	0.449	0.104	0.416	2e-07
355756120	721	hypothetical protein EGM_10078 [Macaca f	0.449	0.104	0.416	2e-07

>gi|114678881|ref|XP_001174580.1| PREDICTED: zinc finger protein 808 isoform 1 [Pan troglodytes] gi|410054401|ref|XP_003953632.1| PREDICTED: zinc finger protein 808 [Pan troglodytes] gi|410054403|ref|XP_003953633.1| PREDICTED: zinc finger protein 808 [Pan troglodytes] gi|410054405|ref|XP_003953634.1| PREDICTED: zinc finger protein 808 [Pan troglodytes] gi|410054407|ref|XP_003953635.1| PREDICTED: zinc finger protein 808 [Pan troglodytes] gi|410054409|ref|XP_003953636.1| PREDICTED: zinc finger protein 808 [Pan troglodytes]

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CT+CDK F R   L +HIRI HT  +P   N    A   +++ +   RI       +CE 
Sbjct: 777 CTICDKAFVRNSYLARHIRI-HTAEKPYKCNECGKAFNEQSHLSRHHRIHTGEKPYKCEA 835

Query: 109 CDKSFTRKDSLKKHNRIFHGGADPKLMDE 137
           CDK F+RK  LK+H RI H G  P   +E
Sbjct: 836 CDKVFSRKSHLKRHRRI-HTGEKPYKCNE 863

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397469974|ref|XP_003806612.1| PREDICTED: zinc finger protein 808-like [Pan paniscus]

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CT+CDK F R   L +HIRI HT  +P   N    A   +++ +   RI       +CE 
Sbjct: 724 CTICDKAFVRNSYLARHIRI-HTAEKPYKCNECGKAFNEQSHLSRHHRIHTGEKPYKCEA 782

Query: 109 CDKSFTRKDSLKKHNRIFHGGADPKLMDE 137
           CDK F+RK  LK+H RI H G  P   +E
Sbjct: 783 CDKVFSRKSHLKRHRRI-HTGEKPYKCNE 810

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|226291631|gb|EEH47059.1| C2H2 transcription factor (Seb1) [Paracoccidioides brasiliensis Pb18]

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 35/117 (29%)

Query: 28  ENSTSVENTSSVDNRTSVGPVVPIDR--------------IPCTLCDKTFTRKDSLKKHI 73
           E+S S   TSS  + T   PV+P++R                CTLC + F R++ LK+H 
Sbjct: 561 ESSESNPQTSSSSDATIPAPVLPVNRRGRKQSLTEDPSKTFVCTLCSRRFRRQEHLKRHY 620

Query: 74  RIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGA 130
           R  HTQ++P                       C  C K F+R D+L +H+R   GGA
Sbjct: 621 RSLHTQDKP---------------------FECHECGKKFSRSDNLAQHSRTHGGGA 656

Source: Paracoccidioides brasiliensis Pb18

Species: Paracoccidioides brasiliensis

Genus: Paracoccidioides

Order: Onygenales

Class: Eurotiomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|157167158|ref|NP_001034975.2| zinc finger protein 808 [Homo sapiens] gi|212288109|sp|Q8N4W9.2|ZN808_HUMAN RecName: Full=Zinc finger protein 808 gi|119592490|gb|EAW72084.1| hCG2040674 [Homo sapiens]

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CT+CDK F R   L +HIRI HT  +P   N    A   +++ +   RI       +CE 
Sbjct: 793 CTVCDKAFVRNSYLARHIRI-HTAEKPYKCNECGKAFNEQSHLSRHHRIHTGEKPYKCEA 851

Query: 109 CDKSFTRKDSLKKHNRIFHGGADPKLMDE 137
           CDK F+RK  LK+H RI H G  P   +E
Sbjct: 852 CDKVFSRKSHLKRH-RIIHTGEKPYKCNE 879

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|225679868|gb|EEH18152.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 35/117 (29%)

Query: 28  ENSTSVENTSSVDNRTSVGPVVPIDR--------------IPCTLCDKTFTRKDSLKKHI 73
           E+S S   TSS  + T   PV+P++R                CTLC + F R++ LK+H 
Sbjct: 565 ESSESNPQTSSSSDATIPAPVLPVNRRGRKQSLTEDPSKTFVCTLCSRRFRRQEHLKRHY 624

Query: 74  RIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGA 130
           R  HTQ++P                       C  C K F+R D+L +H+R   GGA
Sbjct: 625 RSLHTQDKP---------------------FECHECGKKFSRSDNLAQHSRTHGGGA 660

Source: Paracoccidioides brasiliensis Pb03

Species: Paracoccidioides brasiliensis

Genus: Paracoccidioides

Order: Onygenales

Class: Eurotiomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|51491284|emb|CAH18701.1| hypothetical protein [Homo sapiens]

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CT+CDK F R   L +HIRI HT  +P   N    A   +++ +   RI       +CE 
Sbjct: 724 CTVCDKAFVRNSYLARHIRI-HTAEKPYKCNECGKAFNEQSHLSRHHRIHTGEKPYKCEA 782

Query: 109 CDKSFTRKDSLKKHNRIFHGGADPKLMDE 137
           CDK F+RK  LK+H RI H G  P   +E
Sbjct: 783 CDKVFSRKSHLKRH-RIIHTGEKPYKCNE 810

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|402912561|ref|XP_003918825.1| PREDICTED: zinc finger protein 600 isoform 1 [Papio anubis]

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CTLCDK F R   L +H RI HT  +P   N    A   ++  +   RI       +CE 
Sbjct: 653 CTLCDKAFVRNSYLARHTRI-HTAEKPYKCNKCGKAFNQQSQLSLHHRIHTGEKLYKCEA 711

Query: 109 CDKSFTRKDSLKKHNRIFHGGADP 132
           CDK F+RK  LK+H RI H G  P
Sbjct: 712 CDKLFSRKSHLKRH-RIIHTGEKP 734

Source: Papio anubis

Species: Papio anubis

Genus: Papio

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|297278339|ref|XP_002801534.1| PREDICTED: zinc finger protein 845-like [Macaca mulatta]

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CTLCDK F R   L +H RI HT  +P   N    A   ++  +   RI       +CE 
Sbjct: 817 CTLCDKAFVRNSYLARHTRI-HTAEKPYKCNKCGKAFNQQSQLSLHHRIHTGEKLYKCEA 875

Query: 109 CDKSFTRKDSLKKHNRIFHGGADP 132
           CDK F+RK  LK+H RI H G  P
Sbjct: 876 CDKLFSRKSHLKRH-RIIHTGEKP 898

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355703862|gb|EHH30353.1| hypothetical protein EGK_10998 [Macaca mulatta]

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CTLCDK F R   L +H RI HT  +P   N    A   ++  +   RI       +CE 
Sbjct: 583 CTLCDKAFVRNSYLARHTRI-HTAEKPYKCNKCGKAFNQQSQLSLHHRIHTGEKLYKCEA 641

Query: 109 CDKSFTRKDSLKKHNRIFHGGADP 132
           CDK F+RK  LK+H RI H G  P
Sbjct: 642 CDKLFSRKSHLKRH-RIIHTGEKP 664

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355756120|gb|EHH59867.1| hypothetical protein EGM_10078 [Macaca fascicularis]

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
           CTLCDK F R   L +H RI HT  +P   N    A   ++  +   RI       +CE 
Sbjct: 583 CTLCDKAFVRNSYLARHTRI-HTAEKPYKCNKCGKAFNQQSQLSLHHRIHTGEKLYKCEA 641

Query: 109 CDKSFTRKDSLKKHNRIFHGGADP 132
           CDK F+RK  LK+H RI H G  P
Sbjct: 642 CDKLFSRKSHLKRH-RIIHTGEKP 664

Source: Macaca fascicularis

Species: Macaca fascicularis

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
UNIPROTKB|Q8N4W9	903	ZNF808 "Zinc finger protein 80	0.479	0.088	0.404	2e-09
UNIPROTKB|Q6ZNG1	722	ZNF600 "Zinc finger protein 60	0.449	0.103	0.404	3.9e-09
FB|FBgn0036522	971	CG7372 [Drosophila melanogaste	0.604	0.104	0.333	4.5e-09
ZFIN|ZDB-GENE-110913-78	440	si:ch211-152l15.4 "si:ch211-15	0.706	0.268	0.305	1e-08
ZFIN|ZDB-GENE-110913-60	438	si:dkey-156k2.6 "si:dkey-156k2	0.700	0.267	0.296	2.8e-08
ZFIN|ZDB-GENE-060503-152	224	si:dkey-20i20.9 "si:dkey-20i20	0.766	0.571	0.277	3.9e-08
UNIPROTKB|F1LUW4	332	F1LUW4 "Uncharacterized protei	0.449	0.225	0.357	4.5e-08
UNIPROTKB|F1LZ45	381	LOC691254 "Protein LOC691254"	0.754	0.330	0.283	5.9e-08
ZFIN|ZDB-GENE-070424-76	347	zgc:162962 "zgc:162962" [Danio	0.449	0.216	0.380	6.3e-08
ZFIN|ZDB-GENE-050208-547	203	si:dkey-15h8.14 "si:dkey-15h8.	0.556	0.458	0.330	7.4e-08

UNIPROTKB|Q8N4W9 ZNF808 "Zinc finger protein 808" [Homo sapiens (taxid:9606)]

 Score = 150 (57.9 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 36/89 (40%), Positives = 47/89 (52%)

Query:    56 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
             CT+CDK F R   L +HIRI HT  +P   N    A   +++ +   RI       +CE 
Sbjct:   793 CTVCDKAFVRNSYLARHIRI-HTAEKPYKCNECGKAFNEQSHLSRHHRIHTGEKPYKCEA 851

Query:   109 CDKSFTRKDSLKKHNRIFHGGADPKLMDE 137
             CDK F+RK  LK+H RI H G  P   +E
Sbjct:   852 CDKVFSRKSHLKRH-RIIHTGEKPYKCNE 879

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q6ZNG1 ZNF600 "Zinc finger protein 600" [Homo sapiens (taxid:9606)]

 Score = 146 (56.5 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 34/84 (40%), Positives = 43/84 (51%)

Query:    56 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
             CT+CDK F R   L +H RI HT  +P   N    A   ++  +   RI       +CE 
Sbjct:   584 CTVCDKAFVRNSYLARHTRI-HTAEKPYKCNECGKAFNQQSQLSLHHRIHAGEKLYKCET 642

Query:   109 CDKSFTRKDSLKKHNRIFHGGADP 132
             CDK F+RK  LK+H RI H G  P
Sbjct:   643 CDKVFSRKSHLKRHRRI-HPGKKP 665

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

FB|FBgn0036522 CG7372 [Drosophila melanogaster (taxid:7227)]

 Score = 128 (50.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 37/111 (33%), Positives = 52/111 (46%)

Query:    53 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDR-------IR 105
             R  C  C+K F R   L  H+RI HT  +P   ++   A  AR N     R       I+
Sbjct:   712 RYKCDKCNKGFVRSSDLSIHVRI-HTGEKPYSCDLCGKAFRARQNLVVHRRTHLGDKPIQ 770

Query:   106 CELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGE 156
             CELCDK F RK  ++ H R  H G  P   D    RG +  + ++ +++ E
Sbjct:   771 CELCDKRFARKIDMRVHMRR-HTGEKPYNCDA-CQRGYSSRVNLLRHQERE 819

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-78 si:ch211-152l15.4 "si:ch211-152l15.4" [Danio rerio (taxid:7955)]

 Score = 139 (54.0 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 41/134 (30%), Positives = 60/134 (44%)

Query:     6 NVQNHFVSGKKNSTSVENSTSVENSTSVENTSSVDNRTSVGPVVPIDRIPCTLCDKTFTR 65
             N+     +GKK  T  +        TS++N  S+   T   P        CT C KTF  
Sbjct:   285 NIHMRIHTGKKTHTCTQCGKRFTQKTSLDNHMSI--HTGEKPY------RCTECGKTFPH 336

Query:    66 KDSLKKHIRIFHTQNQPQHTNVIEVALGARANAA-FIDR------IRCELCDKSFTRKDS 118
             K SLK H+R  HT  +P            +A+    +D       + C+ C+KS TRK+S
Sbjct:   337 KSSLKHHMRT-HTGEKPFACTQCGKRFTTKASLKNLMDGHTGTIVLTCDQCEKSLTRKES 395

Query:   119 LKKHNRIFHGGADP 132
             ++KH +  + G DP
Sbjct:   396 IRKHIKKINSGEDP 409

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-60 si:dkey-156k2.6 "si:dkey-156k2.6" [Danio rerio (taxid:7955)]

 Score = 135 (52.6 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 40/135 (29%), Positives = 60/135 (44%)

Query:     6 NVQNHFVSGKKNSTSVENSTSVENSTSVENTSSVDNRTSVGPVVPIDRIPCTLCDKTFTR 65
             N+     +GKK  T  +        TS++N   +   T   P        CT C KTF  
Sbjct:   289 NIHMRIHTGKKPHTCTQCGKRFTQKTSLDNHMRI--HTGEKPY------RCTECGKTFPH 340

Query:    66 KDSLKKHIRIFHTQNQP--------QHTNVIEVALGARANAAFIDRIRCELCDKSFTRKD 117
             K +LK H++  HT+ +P        + T    +      +   I  + C+ C+KS TRKD
Sbjct:   341 KSTLKHHMKT-HTEEKPFTCVQCGKRFTTKASLKNHMNGHTGTIV-LTCDQCEKSLTRKD 398

Query:   118 SLKKHNRIFHGGADP 132
             S++KH R  + G DP
Sbjct:   399 SIRKHIRKINSGEDP 413

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-060503-152 si:dkey-20i20.9 "si:dkey-20i20.9" [Danio rerio (taxid:7955)]

 Score = 127 (49.8 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 38/137 (27%), Positives = 55/137 (40%)

Query:     3 ILQNVQNHFVSGKKNSTSVENSTSVENSTSVENTSSVDNRTSVGPVVPIDRIPCTLCDKT 62
             I Q      +  K+ S  +          S E T S   ++       ++ + CT C KT
Sbjct:    66 IKQEETEEIIDVKEESEELNEDEEKHQVKSEEETQSETEQSMSVKGTAVNSLTCTQCGKT 125

Query:    63 FTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCELCDKSFTR 115
              + K +LKKH+RI HT  +P   +  +       N    +R        +C  CDK F  
Sbjct:   126 LSCKSNLKKHMRI-HTGEKPYQCSHCDKRFSFLQNLKAHERTHTGEKPYKCSHCDKRFGH 184

Query:   116 KDSLKKHNRIFHGGADP 132
              + LK H RI H G  P
Sbjct:   185 SEVLKTHMRI-HTGEKP 200

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1LUW4 F1LUW4 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 131 (51.2 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 30/84 (35%), Positives = 43/84 (51%)

Query:    56 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCEL 108
             C  CDK F+  DSL+ H R+ HT  +P   N  + A    ++     R+       +C  
Sbjct:   226 CKECDKAFSEHDSLQTHKRV-HTGEKPYKCNECDKAFSVHSSLQKHKRVHTGEKPYKCNE 284

Query:   109 CDKSFTRKDSLKKHNRIFHGGADP 132
             CDK+F+   SL+KHNR+ H G  P
Sbjct:   285 CDKAFSEHSSLQKHNRV-HTGEKP 307

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1LZ45 LOC691254 "Protein LOC691254" [Rattus norvegicus (taxid:10116)]

 Score = 131 (51.2 bits), Expect = 5.9e-08, P = 5.9e-08
 Identities = 40/141 (28%), Positives = 63/141 (44%)

Query:     4 LQNVQNHFVSGKKNSTSVENSTS--VENSTSVENTSSVDNRTSVGPVVPIDR---IPCTL 58
             L +V+NH +  K+    ++  T   V    +++         S+ P+    R     C  
Sbjct:    49 LLSVENHVICEKRGKV-LDRDTECIVHEHVNIQEKFCKWEEISIVPLESTQRKKRYKCNK 107

Query:    59 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCELCDK 111
             CDK+F R+  L+ H RI HT  +P   +  +     +++     RI       +C  CDK
Sbjct:   108 CDKSFARESYLRHHQRI-HTGEKPYKCSECDKCFTEKSSLRSHMRIHTGEKPYKCSECDK 166

Query:   112 SFTRKDSLKKHNRIFHGGADP 132
              FT K +LK+H RI H G  P
Sbjct:   167 CFTEKGTLKRHMRI-HTGEKP 186

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-070424-76 zgc:162962 "zgc:162962" [Danio rerio (taxid:7955)]

 Score = 130 (50.8 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 32/84 (38%), Positives = 41/84 (48%)

Query:    56 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIR-------CEL 108
             C  C K+F RKDSL+ H+R+ HT  +P        A   + +     RI        C+ 
Sbjct:    95 CPQCPKSFARKDSLRMHLRL-HTGEKPYACPQCAKAFAQKEHLTIHIRIHTGEKPFVCDQ 153

Query:   109 CDKSFTRKDSLKKHNRIFHGGADP 132
             C  SF R DSLK H+RI H G  P
Sbjct:   154 CGSSFARSDSLKNHSRI-HTGVKP 176

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-050208-547 si:dkey-15h8.14 "si:dkey-15h8.14" [Danio rerio (taxid:7955)]

 Score = 123 (48.4 bits), Expect = 7.4e-08, P = 7.4e-08
 Identities = 36/109 (33%), Positives = 53/109 (48%)

Query:    28 ENSTSVENTSSVDNRTSVGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV 87
             E  +  E++ SV+ RT+V P        C  C K+++RK SLK HIRI HT  +P   + 
Sbjct:    43 ETQSEAEDSFSVE-RTAVKPFT------CIECGKSYSRKSSLKIHIRI-HTGERPYQCSH 94

Query:    88 IEVALGARANAAFIDRI-------RCELCDKSFTRKDSLKKHNRIFHGG 129
              +    +  N    +RI       +C  CD  F R ++LK H  + H G
Sbjct:    95 CDKRFSSSENLNSHERIHLREKPYKCSHCDSRFNRSENLKTH-MLIHTG 142

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	167
pfam00096	22	pfam00096, zf-C2H2, Zinc finger, C2H2 type	0.001
pfam13894	24	pfam13894, zf-C2H2_4, C2H2-type zinc finger	0.002
pfam00096	22	pfam00096, zf-C2H2, Zinc finger, C2H2 type	0.004

>gnl|CDD|200998 pfam00096, zf-C2H2, Zinc finger, C2H2 type

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 56 CTLCDKTFTRKDSLKKHIRI 75
          C  C K+F+RK +LK+H+R 
Sbjct: 2  CPDCGKSFSRKSNLKRHLRT 21

The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter. Length = 22

>gnl|CDD|206065 pfam13894, zf-C2H2_4, C2H2-type zinc finger

 Score = 33.8 bits (77), Expect = 0.002
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query: 55 PCTLCDKTFTRKDSLKKHIRIFH 77
           C LC K+F+ KD+LK+H+R  H
Sbjct: 2  KCPLCGKSFSSKDALKRHLRKHH 24

This family contains a number of divergent C2H2 type zinc fingers. Length = 24

>gnl|CDD|200998 pfam00096, zf-C2H2, Zinc finger, C2H2 type

 Score = 33.1 bits (76), Expect = 0.004
 Identities = 11/21 (52%), Positives = 15/21 (71%)

Query: 105 RCELCDKSFTRKDSLKKHNRI 125
           +C  C KSF+RK +LK+H R 
Sbjct: 1   KCPDCGKSFSRKSNLKRHLRT 21

The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter. Length = 22

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
KOG2462|consensus	279		99.9
KOG2462|consensus	279		99.88
KOG1074|consensus	958		99.72
KOG3576|consensus	267		99.68
KOG1074|consensus	958		99.68
KOG3623|consensus	1007		99.61
KOG3623|consensus	1007		99.6
KOG3608|consensus	467		99.41
KOG3608|consensus	467		99.39
KOG3576|consensus	267		99.36
PHA00733	128	hypothetical protein	99.25
PHA02768	55	hypothetical protein; Provisional	99.23
PLN03086	567	PRLI-interacting factor K; Provisional	98.92
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.89
PHA02768	55	hypothetical protein; Provisional	98.78
KOG3993|consensus	500		98.78
PHA00616	44	hypothetical protein	98.73
PHA00732	79	hypothetical protein	98.73
PHA00616	44	hypothetical protein	98.72
PLN03086	567	PRLI-interacting factor K; Provisional	98.72
PHA00733	128	hypothetical protein	98.61
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.46
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.36
KOG3993|consensus	500		98.32
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.32
PHA00732	79	hypothetical protein	98.26
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.24
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.14
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.02
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.99
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.91
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.89
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.89
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.85
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.8
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.58
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.54
smart00355	26	ZnF_C2H2 zinc finger.	97.52
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.35
smart00355	26	ZnF_C2H2 zinc finger.	97.33
PRK04860	160	hypothetical protein; Provisional	97.22
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.19
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.15
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.12
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.91
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.64
KOG1146|consensus	1406		96.5
PRK04860	160	hypothetical protein; Provisional	96.29
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.15
COG4049	65	Uncharacterized protein containing archaeal-type C	95.94
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	95.82
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.75
KOG1146|consensus	1406		95.56
KOG2231|consensus	669		95.55
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.45
COG4049	65	Uncharacterized protein containing archaeal-type C	95.25
KOG2893|consensus	341		94.8
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	94.35
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.95
KOG2186|consensus	276		93.85
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.24
COG5048	467	FOG: Zn-finger [General function prediction only]	93.07
KOG2482|consensus	423		93.06
KOG4173|consensus	253		92.87
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	92.44
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	92.05
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	91.66
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	91.34
COG5048	467	FOG: Zn-finger [General function prediction only]	91.13
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	90.78
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	90.63
COG5236	493	Uncharacterized conserved protein, contains RING Z	90.36
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	90.14
KOG2893|consensus	341		89.91
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	89.89
KOG2231|consensus	669		89.75
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	89.36
KOG2482|consensus	423		89.34
PHA00626	59	hypothetical protein	88.83
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	88.35
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	88.3
PRK06266	178	transcription initiation factor E subunit alpha; V	88.09
PF15135	278	UPF0515: Uncharacterised protein UPF0515	87.76
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	87.69
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	87.56
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	87.29
COG1592	166	Rubrerythrin [Energy production and conversion]	87.06
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	86.09
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	86.04
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	85.93
COG5236	493	Uncharacterized conserved protein, contains RING Z	85.8
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	85.74
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	85.58
smart00531	147	TFIIE Transcription initiation factor IIE.	84.98
COG1592	166	Rubrerythrin [Energy production and conversion]	84.88
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	84.46
KOG2785|consensus	390		83.84
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	83.82
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	83.68
COG3357	97	Predicted transcriptional regulator containing an	83.6
KOG2785|consensus	390		83.49
KOG2186|consensus	276		83.07
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	82.96
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.84
KOG4167|consensus	907		82.63
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	82.48
PF14353	128	CpXC: CpXC protein	82.3
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	82.29
cd00730	50	rubredoxin Rubredoxin; nonheme iron binding domain	82.16
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	82.02
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	80.62

>KOG2462|consensus

Probab=99.90  E-value=2.2e-24  Score=151.28  Aligned_cols=109  Identities=17%  Similarity=0.231  Sum_probs=83.8

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHhcCC---CCcccccchhhhhhccccccc-------cCceecccccccccChhHH
Q psy8167          50 PIDRIPCTLCDKTFTRKDSLKKHIRIFHTQ---NQPQHTNVIEVALGARANAAF-------IDRIRCELCDKSFTRKDSL  119 (167)
Q Consensus        50 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~---~~~~~c~~c~~~~~~~~~~~l-------~k~~~C~~C~k~f~~~~~l  119 (167)
                      ....|.|..||+.+....+|.+|. +.|..   .+.+.|+.|++.+..  ...|       .-++.|.+|||.|.+...|
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHk-Q~H~~~~s~ka~~C~~C~K~YvS--mpALkMHirTH~l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHK-QTHRSLDSKKAFSCKYCGKVYVS--MPALKMHIRTHTLPCECGICGKAFSRPWLL  203 (279)
T ss_pred             cCCceeccccccccccccccchhh-cccccccccccccCCCCCceeee--hHHHhhHhhccCCCcccccccccccchHHh
Confidence            345688888888888888888887 65643   456888888888776  5444       3356788888888888888


Q ss_pred             HHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         120 KKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       120 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      +-|+|+|+|||||.|..|+|+|..+++|+-|+++|.+.++..
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~q  245 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQ  245 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcccc
Confidence            888888888888888888888888888888888887766544

>KOG2462|consensus

Probab=99.88  E-value=2.6e-23  Score=145.92  Aligned_cols=102  Identities=18%  Similarity=0.245  Sum_probs=91.1

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccc-------cCceecccccccccChhHHHHHH
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAF-------IDRIRCELCDKSFTRKDSLKKHN  123 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l-------~k~~~C~~C~k~f~~~~~l~~H~  123 (167)
                      .+.+.|+.|++.|..-..|.+|+ ++|+  .+++|.+||+.|...=.+.-       +|+|.|+.|+|+|..+++|+.||
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHi-rTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHm  235 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHI-RTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHM  235 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHh-hccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHH
Confidence            56799999999999999999999 6685  78999999999985111111       99999999999999999999999


Q ss_pred             HhhcCCCCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         124 RIFHGGADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       124 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      ++|.+.|+|+|..|+|+|...+.|.+|...-.
T Consensus       236 QTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C  267 (279)
T KOG2462|consen  236 QTHSDVKKHQCPRCGKSFALKSYLNKHSESAC  267 (279)
T ss_pred             HhhcCCccccCcchhhHHHHHHHHHHhhhhcc
Confidence            99999999999999999999999999998544

>KOG1074|consensus

Probab=99.72  E-value=5.3e-18  Score=134.05  Aligned_cols=55  Identities=18%  Similarity=0.214  Sum_probs=51.7

Q ss_pred             ecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         105 RCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       105 ~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      .|-+|.++..-++.|+.|.|+|+|++||+|.+||+.|..+-+|+.|+-+|....|
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~  661 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPP  661 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcc
Confidence            6999999999999999999999999999999999999999999999998876444

>KOG3576|consensus

Probab=99.68  E-value=1.9e-17  Score=111.70  Aligned_cols=107  Identities=21%  Similarity=0.366  Sum_probs=90.2

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccc---------cCceecccccccccChhHHHH
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAF---------IDRIRCELCDKSFTRKDSLKK  121 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l---------~k~~~C~~C~k~f~~~~~l~~  121 (167)
                      ...|.|.+|++.|....-|.+|+ ..|...+-+-|..||+.|.+  .+.|         .++|+|..|+|+|.++-.|..
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~-kch~~vkr~lct~cgkgfnd--tfdlkrh~rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHL-KCHSDVKRHLCTFCGKGFND--TFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHh-hhccHHHHHHHhhccCcccc--hhhhhhhhccccCccccchhhhhHHHHhhccHHH
Confidence            46799999999999999999999 88998888899999988877  5555         678889999999999988888


Q ss_pred             HHHhhcC-----------CCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHG-----------GADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |++.-|+           .+.|.|..||..-.....+-.|++.||+..|.
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            8876665           35688999998888888888888888876553

>KOG1074|consensus

Probab=99.68  E-value=6.5e-17  Score=128.02  Aligned_cols=57  Identities=23%  Similarity=0.223  Sum_probs=53.5

Q ss_pred             ecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         105 RCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       105 ~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      -|.+||+.|...+.|+.|+++|.++|||.|.+|++.|..+-+|+.||.+|....|.+
T Consensus       881 ~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~s  937 (958)
T KOG1074|consen  881 VCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPS  937 (958)
T ss_pred             hhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCc
Confidence            499999999999999999999999999999999999999999999999998766543

>KOG3623|consensus

Probab=99.61  E-value=1.3e-16  Score=124.72  Aligned_cols=102  Identities=22%  Similarity=0.374  Sum_probs=88.4

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCC-CCcccccchhhhhhccccccc--------------------cCceecccc
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQ-NQPQHTNVIEVALGARANAAF--------------------IDRIRCELC  109 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~c~~c~~~~~~~~~~~l--------------------~k~~~C~~C  109 (167)
                      .....|++|.+.+.+...|..|++..|.. +..|.|..|..+|..++.+--                    .++|+|..|
T Consensus       208 sqlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtEC  287 (1007)
T KOG3623|consen  208 SQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTEC  287 (1007)
T ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhcccccccc
Confidence            34578999999999999999999766644 346999999999987432211                    688999999


Q ss_pred             cccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHh
Q psy8167         110 DKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLN  152 (167)
Q Consensus       110 ~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  152 (167)
                      ||+|..+-+|+.|+|+|.|+|||.|+.|+|.|...-.+..|+-
T Consensus       288 gKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  288 GKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             chhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            9999999999999999999999999999999999999999985

>KOG3623|consensus

Probab=99.60  E-value=6e-16  Score=121.15  Aligned_cols=83  Identities=24%  Similarity=0.432  Sum_probs=76.1

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhc
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      ..++..|.|..|+++|...+.|.+|. -.|+|.+|                     |.|.+|.|+|.++-+|..|+|.|.
T Consensus       889 kte~gmyaCDqCDK~FqKqSSLaRHK-YEHsGqRP---------------------yqC~iCkKAFKHKHHLtEHkRLHS  946 (1007)
T KOG3623|consen  889 KTEDGMYACDQCDKAFQKQSSLARHK-YEHSGQRP---------------------YQCIICKKAFKHKHHLTEHKRLHS  946 (1007)
T ss_pred             cCccccchHHHHHHHHHhhHHHHHhh-hhhcCCCC---------------------cccchhhHhhhhhhhhhhhhhhcc
Confidence            34567899999999999999999998 66999988                     577778889999999999999999


Q ss_pred             CCCCCCCCchhhhcCCHHHHHHHHh
Q psy8167         128 GGADPKLMDEQMARGSADFLEVVLN  152 (167)
Q Consensus       128 ~~~~~~C~~C~~~f~~~~~l~~H~~  152 (167)
                      |+|||+|+.|+|.|...-.+..||.
T Consensus       947 GEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  947 GEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             CCCcchhhhhhhhcccccchHhhhc
Confidence            9999999999999999999999996

>KOG3608|consensus

Probab=99.41  E-value=4.9e-13  Score=97.38  Aligned_cols=97  Identities=18%  Similarity=0.240  Sum_probs=54.3

Q ss_pred             ccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccc----------------------------cc-------cC
Q psy8167          58 LCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANA----------------------------AF-------ID  102 (167)
Q Consensus        58 ~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~----------------------------~l-------~k  102 (167)
                      .|-+.|.++..|++|+ +.|+++|...|+.||..|..++.+                            .|       ..
T Consensus       184 ~Ct~~~~~k~~LreH~-r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn  262 (467)
T KOG3608|consen  184 MCTKHMGNKYRLREHI-RTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN  262 (467)
T ss_pred             hhhhhhccHHHHHHHH-HhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh
Confidence            4556666666666666 556666666666666655552211                            11       22


Q ss_pred             ceecccccccccChhHHHHHHHh-hcCCCCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRI-FHGGADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      -|+|+.|.-.....+.|..||+. |..++|++|+.|++.|.+.+.|.+|+..|.
T Consensus       263 ~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  263 CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            34566666666666666666553 334566666666666666666666665553

>KOG3608|consensus

Probab=99.39  E-value=4.9e-13  Score=97.36  Aligned_cols=100  Identities=22%  Similarity=0.253  Sum_probs=53.1

Q ss_pred             ccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccc------cCceeccc--ccccccChhHHHHHHHh
Q psy8167          54 IPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAF------IDRIRCEL--CDKSFTRKDSLKKHNRI  125 (167)
Q Consensus        54 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l------~k~~~C~~--C~k~f~~~~~l~~H~~~  125 (167)
                      |+|+.|++.....++|..|++..|..++||+|..|.+.+...+.++-      +-.|.|..  |-..|.+...|++|++.
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~e  343 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLE  343 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHH
Confidence            45555555555555555555555555555555555555554211111      23345544  55555555555555555


Q ss_pred             hcC---CCCCCCCchhhhcCCHHHHHHHHhh
Q psy8167         126 FHG---GADPKLMDEQMARGSADFLEVVLNE  153 (167)
Q Consensus       126 h~~---~~~~~C~~C~~~f~~~~~l~~H~~~  153 (167)
                      ++.   ..+|.|..|++.|.+..+|..|+..
T Consensus       344 vhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  344 VHEGNNPILYACHCCDRFFTSGKSLSAHLMK  374 (467)
T ss_pred             hccCCCCCceeeecchhhhccchhHHHHHHH
Confidence            542   2345666666666666666666554

>KOG3576|consensus

Probab=99.36  E-value=1.3e-13  Score=93.26  Aligned_cols=78  Identities=22%  Similarity=0.209  Sum_probs=67.0

Q ss_pred             CCCCcccccchhhhhhccccccc-------cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHH
Q psy8167          78 TQNQPQHTNVIEVALGARANAAF-------IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVV  150 (167)
Q Consensus        78 ~~~~~~~c~~c~~~~~~~~~~~l-------~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  150 (167)
                      .+...|.|.+|++.|.....++-       .+++-|..|||.|..--.|.+|+|+|+|.+||+|..|+|+|.....|..|
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            34457999999999987332222       56778999999999999999999999999999999999999999999999


Q ss_pred             HhhcC
Q psy8167         151 LNEDG  155 (167)
Q Consensus       151 ~~~~~  155 (167)
                      ++.-|
T Consensus       193 l~kvh  197 (267)
T KOG3576|consen  193 LKKVH  197 (267)
T ss_pred             HHHHc
Confidence            98544

>PHA00733 hypothetical protein

Probab=99.25  E-value=9.5e-12  Score=80.48  Aligned_cols=86  Identities=14%  Similarity=0.050  Sum_probs=65.9

Q ss_pred             CCcccccccccccCCHHHHHHHHH-HhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcCC
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIR-IFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      .+++.|.+|.+.|.....|..+.. ..|..                  ..-.++|.|..||+.|.....|..|++.|  .
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~------------------~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~   97 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLT------------------SKAVSPYVCPLCLMPFSSSVSLKQHIRYT--E   97 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcc------------------cCCCCCccCCCCCCcCCCHHHHHHHHhcC--C
Confidence            466788888888887776666521 11111                  00145689999999999999999999975  4


Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      .++.|..|++.|.....|..|+..+|+
T Consensus        98 ~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         98 HSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            579999999999999999999987664

>PHA02768 hypothetical protein; Provisional

Probab=99.23  E-value=3.1e-12  Score=69.19  Aligned_cols=42  Identities=17%  Similarity=0.328  Sum_probs=39.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHH
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFL  147 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  147 (167)
                      |.|+.||+.|.+.+.|..|+++|+  ++++|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            789999999999999999999988  799999999999987665

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.92  E-value=2.1e-09  Score=84.53  Aligned_cols=97  Identities=14%  Similarity=0.274  Sum_probs=71.8

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhcccccc-------ccCceecccccccccC--------
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAA-------FIDRIRCELCDKSFTR--------  115 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~-------l~k~~~C~~C~k~f~~--------  115 (167)
                      +..+.|+.|++.|. ...|..|+ ..|.  +++.|+ |++.+.. ..+.       ..+++.|..|++.|..        
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~-~~~H--kpv~Cp-Cg~~~~R-~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~  524 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHM-KVFH--EPLQCP-CGVVLEK-EQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVR  524 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHH-HhcC--CCccCC-CCCCcch-hHHHhhhhccCCCCceeCCCCCCccccCccccchh
Confidence            34578999999996 67799999 4452  789998 9865432 1111       1678899999998852        


Q ss_pred             --hhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         116 --KDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       116 --~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                        .+.|..|... .+.+++.|..||+.|..+ .|..|+-.-|
T Consensus       525 d~~s~Lt~HE~~-CG~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        525 DRLRGMSEHESI-CGSRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             hhhhhHHHHHHh-cCCcceEccccCCeeeeh-hHHHHHHHhh
Confidence              4578889888 688999999999988776 4667776544

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.89  E-value=5.3e-10  Score=51.94  Aligned_cols=26  Identities=19%  Similarity=0.126  Sum_probs=24.0

Q ss_pred             HHHHHHHhhcCCCCCCCCchhhhcCC
Q psy8167         118 SLKKHNRIFHGGADPKLMDEQMARGS  143 (167)
Q Consensus       118 ~l~~H~~~h~~~~~~~C~~C~~~f~~  143 (167)
                      +|.+|+++|.+++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58899999999999999999999964

...

>PHA02768 hypothetical protein; Provisional

Probab=98.78  E-value=4.4e-09  Score=56.95  Aligned_cols=38  Identities=13%  Similarity=0.301  Sum_probs=29.5

Q ss_pred             ccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhc
Q psy8167          54 IPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGA   94 (167)
Q Consensus        54 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~   94 (167)
                      |.|+.||+.|.....|..|+ ++|+  ++++|..|++.|..
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~-r~H~--k~~kc~~C~k~f~~   43 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHL-RKHN--TNLKLSNCKRISLR   43 (55)
T ss_pred             cCcchhCCeeccHHHHHHHH-HhcC--CcccCCcccceecc
Confidence            79999999999999999999 6686  56555555544443

>KOG3993|consensus

Probab=98.78  E-value=1.5e-09  Score=81.07  Aligned_cols=83  Identities=18%  Similarity=0.221  Sum_probs=64.6

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcC---
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG---  128 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~---  128 (167)
                      .-|.|+.|...|.+-..|.+|. -..                     .....|+|+.|+|+|.-..+|-.|.|.|..   
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHr-C~R---------------------IV~vEYrCPEC~KVFsCPANLASHRRWHKPR~e  323 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHR-CPR---------------------IVHVEYRCPECDKVFSCPANLASHRRWHKPRPE  323 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhcc-CCe---------------------eEEeeecCCcccccccCchhhhhhhcccCCchh
Confidence            3478888888888887777774 211                     114458999999999999999999998742   


Q ss_pred             -----C-------------------------CCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         129 -----G-------------------------ADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       129 -----~-------------------------~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                           .                         .-|.|.+|+|.|.+...|+.|+.+|+.
T Consensus       324 aa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  324 AAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             hhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                 1                         127899999999999999999988774

>PHA00616 hypothetical protein

Probab=98.73  E-value=8.1e-09  Score=53.27  Aligned_cols=33  Identities=21%  Similarity=0.310  Sum_probs=18.8

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      |.|..||+.|..++.|.+|++.||+++++.|+.
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            455555555555555555555555555555543

>PHA00732 hypothetical protein

Probab=98.73  E-value=7.2e-09  Score=61.19  Aligned_cols=48  Identities=19%  Similarity=0.135  Sum_probs=40.4

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      +|.|..||+.|.....|..|++.+|.  ++.|..|++.|.   .|..|..++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--CCccCCCCCEeC---ChhhhhcccC
Confidence            47899999999999999999985343  468999999998   4789987654

>PHA00616 hypothetical protein

Probab=98.72  E-value=5.6e-09  Score=53.85  Aligned_cols=34  Identities=3%  Similarity=-0.215  Sum_probs=31.3

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcCCCCCccccc
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDGEGEPVSITV  164 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  164 (167)
                      ||+|..||+.|....+|.+|++.||+.+|..+.-
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999887653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.72  E-value=5.5e-08  Score=76.66  Aligned_cols=99  Identities=13%  Similarity=0.286  Sum_probs=59.2

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCCCCcccccc--hhhhhhccccccccCceecccccccccChhHHHHHHHhhcCC
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV--IEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~--c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      ..-.|..|........ |..|. ... ....-.|+.  |+..|..   ..+.+.+.|+.||+.|. ...|..|+.+||  
T Consensus       406 ~~V~C~NC~~~i~l~~-l~lHe-~~C-~r~~V~Cp~~~Cg~v~~r---~el~~H~~C~~Cgk~f~-~s~LekH~~~~H--  476 (567)
T PLN03086        406 DTVECRNCKHYIPSRS-IALHE-AYC-SRHNVVCPHDGCGIVLRV---EEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--  476 (567)
T ss_pred             CeEECCCCCCccchhH-HHHHH-hhC-CCcceeCCcccccceeec---cccccCccCCCCCCccc-hHHHHHHHHhcC--
Confidence            3457999988755544 66887 433 333445653  6666632   33344456777776664 456666766654  


Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      +++.|+ ||+.+ ....|..|++.|.+.+|..
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~  506 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLIT  506 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCcee
Confidence            566676 76544 4566666766666665543

>PHA00733 hypothetical protein

Probab=98.61  E-value=8.2e-08  Score=62.19  Aligned_cols=54  Identities=31%  Similarity=0.551  Sum_probs=45.7

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcC
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      .++|.|..|++.|.....|..|+ ..|.  .                     +|.|.+|++.|.....|..|+...|+
T Consensus        71 ~kPy~C~~Cgk~Fss~s~L~~H~-r~h~--~---------------------~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         71 VSPYVCPLCLMPFSSSVSLKQHI-RYTE--H---------------------SKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCccCCCCCCcCCCHHHHHHHH-hcCC--c---------------------CccCCCCCCccCCHHHHHHHHHHhcC
Confidence            57899999999999999999998 5442  1                     26899999999999999999998775

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.46  E-value=7.3e-08  Score=44.63  Aligned_cols=25  Identities=20%  Similarity=0.375  Sum_probs=20.1

Q ss_pred             HHHHHHHHhcCCCCcccccchhhhhh
Q psy8167          68 SLKKHIRIFHTQNQPQHTNVIEVALG   93 (167)
Q Consensus        68 ~l~~H~~~~h~~~~~~~c~~c~~~~~   93 (167)
                      +|.+|+ +.|++++||.|+.|++.|.
T Consensus         1 ~l~~H~-~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHM-RTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHH-HHHSSSSSEEESSSSEEES
T ss_pred             CHHHHh-hhcCCCCCCCCCCCcCeeC
Confidence            488999 6799999987777776664

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.36  E-value=8.5e-07  Score=48.67  Aligned_cols=51  Identities=20%  Similarity=0.129  Sum_probs=40.4

Q ss_pred             ceecccccccccChhHHHHHHHhhcCC--CCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGG--ADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      .|.|++||+. .....|..|....|..  +.+.|++|...+..  +|.+|+..+|+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~~--~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVTD--NLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhhh--HHHHHHHHhcC
Confidence            4889999994 5567899998776653  46999999987664  89999987663

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG3993|consensus

Probab=98.32  E-value=3.1e-07  Score=69.00  Aligned_cols=76  Identities=26%  Similarity=0.433  Sum_probs=49.0

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCCCCc-c--cccchhhhhhccc---------cccccCceecccccccccChhHH
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQP-Q--HTNVIEVALGARA---------NAAFIDRIRCELCDKSFTRKDSL  119 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~-~--~c~~c~~~~~~~~---------~~~l~k~~~C~~C~k~f~~~~~l  119 (167)
                      ..|+|+.|++.|.-..+|..|.+| |.-... -  .-+.-.+....+.         ...-..-|.|.+|+|.|.+..-|
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRW-HKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYL  372 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRW-HKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYL  372 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcc-cCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHH
Confidence            459999999999999999999977 533221 1  0000000000000         00113358999999999999999


Q ss_pred             HHHHHhhcC
Q psy8167         120 KKHNRIFHG  128 (167)
Q Consensus       120 ~~H~~~h~~  128 (167)
                      +.|+-+|+.
T Consensus       373 rKHqlthq~  381 (500)
T KOG3993|consen  373 RKHQLTHQR  381 (500)
T ss_pred             HHhHHhhhc
Confidence            999887753

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.32  E-value=1.6e-06  Score=47.54  Aligned_cols=53  Identities=26%  Similarity=0.479  Sum_probs=40.1

Q ss_pred             cccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcC
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      .|.|++|++ ..+...|..|....|..+.                    +.+.|++|...+.  .+|..|+..+|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~--------------------~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES--------------------KNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC--------------------CCccCCCchhhhh--hHHHHHHHHhcC
Confidence            489999999 5667889999988887653                    1256777776544  489999988764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.26  E-value=7.1e-07  Score=52.73  Aligned_cols=46  Identities=33%  Similarity=0.582  Sum_probs=35.5

Q ss_pred             cccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHh
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      +|.|..|++.|.....|..|++..|.+                        +.|+.||+.|.   .+..|+++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~------------------------~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL------------------------TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC------------------------CccCCCCCEeC---Chhhhhcc
Confidence            488999999999999999999434542                        35778888887   36667754

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.24  E-value=9.1e-07  Score=39.65  Aligned_cols=22  Identities=45%  Similarity=0.934  Sum_probs=13.7

Q ss_pred             eecccccccccChhHHHHHHHh
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      |.|+.|++.|..+..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.14  E-value=8.1e-07  Score=39.81  Aligned_cols=23  Identities=13%  Similarity=-0.148  Sum_probs=21.2

Q ss_pred             CCCCchhhhcCCHHHHHHHHhhc
Q psy8167         132 PKLMDEQMARGSADFLEVVLNED  154 (167)
Q Consensus       132 ~~C~~C~~~f~~~~~l~~H~~~~  154 (167)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.02  E-value=5.4e-06  Score=37.24  Aligned_cols=22  Identities=41%  Similarity=0.890  Sum_probs=10.7

Q ss_pred             ecccccccccChhHHHHHHHhh
Q psy8167         105 RCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       105 ~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      .|++|++.|.....|..|+++|
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHHhh
Confidence            4555555555555555555544

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.99  E-value=3.1e-06  Score=38.07  Aligned_cols=24  Identities=8%  Similarity=-0.236  Sum_probs=20.3

Q ss_pred             CCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         132 PKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       132 ~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      |.|++|++.|.+...|..|++.||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            579999999999999999999875

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.91  E-value=5.4e-06  Score=51.19  Aligned_cols=49  Identities=24%  Similarity=0.349  Sum_probs=21.3

Q ss_pred             cccccccccChhHHHHHHHhhcC-----------------------CCCCCCCchhhhcCCHHHHHHHHhhc
Q psy8167         106 CELCDKSFTRKDSLKKHNRIFHG-----------------------GADPKLMDEQMARGSADFLEVVLNED  154 (167)
Q Consensus       106 C~~C~k~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~~~f~~~~~l~~H~~~~  154 (167)
                      |..|+..|.....|..|+...|+                       ...+.|..|++.|.+...|..|++.+
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            66677777777777777655443                       12488999999999999999999964

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.89  E-value=9.8e-06  Score=50.01  Aligned_cols=72  Identities=25%  Similarity=0.520  Sum_probs=21.8

Q ss_pred             cccccccccCCHHHHHHHHHHhcCCCCcccccc-hhhhhhccccccccCceecccccccccChhHHHHHHHhh
Q psy8167          55 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV-IEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus        55 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~-c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      .|..|+..|.....|..|+...|.-..+-.-.. -...+.......+...+.|..|++.|.....|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            489999999999999999988785543310000 000111100111234589999999999999999999974

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.89  E-value=5.6e-06  Score=38.55  Aligned_cols=23  Identities=30%  Similarity=0.788  Sum_probs=11.4

Q ss_pred             eecccccccccChhHHHHHHHhh
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      |.|..|++.|.....|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            44555555555555555554443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.85  E-value=6.6e-06  Score=43.45  Aligned_cols=33  Identities=9%  Similarity=-0.172  Sum_probs=21.8

Q ss_pred             CCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         128 GGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       128 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      .+.|..|++|+..+....+|++|+...|+.+|.
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS--
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccCC
Confidence            456788888888888888888888888877764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.80  E-value=1.6e-05  Score=36.95  Aligned_cols=26  Identities=8%  Similarity=-0.202  Sum_probs=23.9

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      +|.|..|++.|.+...|..|++.|+.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57899999999999999999998864

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.58  E-value=6.1e-05  Score=55.08  Aligned_cols=69  Identities=25%  Similarity=0.459  Sum_probs=43.9

Q ss_pred             CCcccccc--cccccCCHHHHHHHHHHhcCCCCccccc--chhhhhhccccccccCceecccccccccChhHHHHHHH
Q psy8167          51 IDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTN--VIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNR  124 (167)
Q Consensus        51 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~--~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~  124 (167)
                      ++||+|++  |++.|+....|.-|+..-|...+...-+  .--..|     ..-.|+|+|++|+|.|.....|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F-----~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF-----SAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc-----cccCCceeccccchhhccCccceeccc
Confidence            48999987  9999999999999983323211111111  000001     111577888888888888888877754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.54  E-value=0.0001  Score=39.03  Aligned_cols=31  Identities=19%  Similarity=0.383  Sum_probs=23.0

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGAD  131 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~  131 (167)
                      ..+-.|++|+..+.+..+|++|+.++|+.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            5567899999999999999999999998775

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.52  E-value=0.0001  Score=33.43  Aligned_cols=23  Identities=9%  Similarity=-0.092  Sum_probs=13.1

Q ss_pred             CCCCchhhhcCCHHHHHHHHhhc
Q psy8167         132 PKLMDEQMARGSADFLEVVLNED  154 (167)
Q Consensus       132 ~~C~~C~~~f~~~~~l~~H~~~~  154 (167)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            34555666666666666665543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.35  E-value=5e-05  Score=55.50  Aligned_cols=53  Identities=15%  Similarity=0.151  Sum_probs=44.6

Q ss_pred             cCceeccc--ccccccChhHHHHHHHhhc-------------------CCCCCCCCchhhhcCCHHHHHHHHhh
Q psy8167         101 IDRIRCEL--CDKSFTRKDSLKKHNRIFH-------------------GGADPKLMDEQMARGSADFLEVVLNE  153 (167)
Q Consensus       101 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~~  153 (167)
                      +|+|+|++  |.|.|.....|+-|+..-|                   ..|||.|.+|+|.+..-.-|+-|...
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            58899987  8999999999999976433                   14899999999999999988888764

>smart00355 ZnF_C2H2 zinc finger

Probab=97.33  E-value=0.0002  Score=32.39  Aligned_cols=24  Identities=42%  Similarity=0.737  Sum_probs=21.4

Q ss_pred             eecccccccccChhHHHHHHHhhc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            479999999999999999999754

>PRK04860 hypothetical protein; Provisional

Probab=97.22  E-value=0.00019  Score=48.27  Aligned_cols=38  Identities=21%  Similarity=0.368  Sum_probs=33.6

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCH
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSA  144 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  144 (167)
                      +|.|. |++   ....+++|.++|.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            58998 997   777889999999999999999999988754

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.19  E-value=0.00036  Score=31.30  Aligned_cols=23  Identities=35%  Similarity=0.670  Sum_probs=11.1

Q ss_pred             eecccccccccChhHHHHHHHhhc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      |+|+.|..... ...|.+|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            34555555554 555555555544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.15  E-value=0.00014  Score=32.72  Aligned_cols=24  Identities=13%  Similarity=-0.042  Sum_probs=19.3

Q ss_pred             CCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         132 PKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       132 ~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      |+|..|++... ...|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            68999999998 9999999998653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.12  E-value=0.00019  Score=32.58  Aligned_cols=21  Identities=14%  Similarity=-0.137  Sum_probs=12.8

Q ss_pred             CCCchhhhcCCHHHHHHHHhh
Q psy8167         133 KLMDEQMARGSADFLEVVLNE  153 (167)
Q Consensus       133 ~C~~C~~~f~~~~~l~~H~~~  153 (167)
                      .|.+|++.|.+...|+.|++.
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCcCCHHHHHHHHCc
Confidence            466666666666666666653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.91  E-value=0.0008  Score=30.41  Aligned_cols=23  Identities=39%  Similarity=0.869  Sum_probs=20.8

Q ss_pred             eecccccccccChhHHHHHHHhh
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      |.|.+|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999999863

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.64  E-value=0.00046  Score=31.94  Aligned_cols=21  Identities=10%  Similarity=-0.189  Sum_probs=12.5

Q ss_pred             CCCCchhhhcCCHHHHHHHHh
Q psy8167         132 PKLMDEQMARGSADFLEVVLN  152 (167)
Q Consensus       132 ~~C~~C~~~f~~~~~l~~H~~  152 (167)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666666554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=96.50  E-value=0.00073  Score=58.00  Aligned_cols=103  Identities=15%  Similarity=0.132  Sum_probs=71.2

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhcc----ccccccCceecccccccccChhHHHHHHHh
Q psy8167          50 PIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGAR----ANAAFIDRIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus        50 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~----~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      ..+.++|+.|+..|++...|..||+..|.....-.|.. +..-...    ....-.++|.|..|...+..+.+|.+|+..
T Consensus       462 ~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~-gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  462 FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKA-GQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccccccCCccchhhhhHHHhhhcccccccccchhHhHh-ccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            35779999999999999999999977675443312211 0000000    001116778999999999999999998764


Q ss_pred             hcC-------------------------------------------CCCCCCCchhhhcCCHHHHHHHHhh
Q psy8167         126 FHG-------------------------------------------GADPKLMDEQMARGSADFLEVVLNE  153 (167)
Q Consensus       126 h~~-------------------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~  153 (167)
                      -..                                           .-.+.|.+|++--.-..+|+-|+..
T Consensus       541 ~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmts  611 (1406)
T KOG1146|consen  541 DLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTA  611 (1406)
T ss_pred             HhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhcccccccc
Confidence            210                                           1137899999988888889889874

>PRK04860 hypothetical protein; Provisional

Probab=96.29  E-value=0.0021  Score=43.29  Aligned_cols=38  Identities=11%  Similarity=0.121  Sum_probs=31.5

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhc
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGA   94 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~   94 (167)
                      -+|.|. |+.   ....+.+|. ++|.++++|.|..|+..|..
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~-ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHN-RVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHH-HHhcCCccEECCCCCceeEE
Confidence            469998 997   677788999 88999999888888777654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.15  E-value=0.0023  Score=29.52  Aligned_cols=22  Identities=36%  Similarity=0.833  Sum_probs=20.1

Q ss_pred             eecccccccccChhHHHHHHHh
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      |.|..|++.|.....+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=95.94  E-value=0.0034  Score=33.85  Aligned_cols=29  Identities=10%  Similarity=-0.138  Sum_probs=21.2

Q ss_pred             cCCCCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         127 HGGADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       127 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      .|+.-+.|+.||+.|.....+.+|+...|
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            45666778888888888888888876433

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=95.82  E-value=0.022  Score=35.79  Aligned_cols=27  Identities=19%  Similarity=0.415  Sum_probs=20.6

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCC
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQ   79 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~   79 (167)
                      +...|..|+.+..- ..+..|++..|..
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~   36 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHI   36 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhccc
Confidence            55789999987666 7788999756643

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.75  E-value=0.0083  Score=27.16  Aligned_cols=19  Identities=16%  Similarity=-0.225  Sum_probs=9.0

Q ss_pred             CCCchhhhcCCHHHHHHHHh
Q psy8167         133 KLMDEQMARGSADFLEVVLN  152 (167)
Q Consensus       133 ~C~~C~~~f~~~~~l~~H~~  152 (167)
                      .|..||+.| ....|.+|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            345555555 4444444443

>KOG1146|consensus

Probab=95.56  E-value=0.012  Score=50.90  Aligned_cols=52  Identities=17%  Similarity=0.275  Sum_probs=43.4

Q ss_pred             CceecccccccccChhHHHHHHHhhc-------------------------CCCCCCCCchhhhcCCHHHHHHHHhh
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFH-------------------------GGADPKLMDEQMARGSADFLEVVLNE  153 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~-------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~  153 (167)
                      +.+.|+.|+-.|.....|..|||.-|                         +.++|.|..|..++....+|..|+..
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            45788888888888888888888722                         24689999999999999999999963

>KOG2231|consensus

Probab=95.55  E-value=0.021  Score=46.63  Aligned_cols=100  Identities=22%  Similarity=0.280  Sum_probs=62.5

Q ss_pred             ccccccccccC---------------CHHHHHHHHHHhcCCCCcccccchhhh---hhc------cccccc---------
Q psy8167          54 IPCTLCDKTFT---------------RKDSLKKHIRIFHTQNQPQHTNVIEVA---LGA------RANAAF---------  100 (167)
Q Consensus        54 ~~C~~C~~~f~---------------~~~~l~~H~~~~h~~~~~~~c~~c~~~---~~~------~~~~~l---------  100 (167)
                      +.|.+|++.|.               ....|..|+...|.   .+.|..|...   |..      +..+..         
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~---~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~  176 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK---LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDD  176 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh---hhccccccccceeeeeeeehehHHHHHHHHhcCCCcc
Confidence            55888888773               67899999977774   3555555432   211      000000         


Q ss_pred             ---cCceecccccccccChhHHHHHHHhhcCCCCCCC---CchhhhcCCHHHHHHHHhhcCCC
Q psy8167         101 ---IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKL---MDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       101 ---~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C---~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                         ...-.|..|...|.....|.+|++.+|-. -.-|   +.++..|.....|..|-+.+|..
T Consensus       177 ~s~rGhp~C~~C~~~fld~~el~rH~~~~h~~-chfC~~~~~~neyy~~~~dLe~HfR~~Hfl  238 (669)
T KOG2231|consen  177 ESCRGHPLCKFCHERFLDDDELYRHLRFDHEF-CHFCDYKTGQNEYYNDYDDLEEHFRKGHFL  238 (669)
T ss_pred             ccccCCccchhhhhhhccHHHHHHhhccceeh-eeecCcccccchhcccchHHHHHhhhcCcc
Confidence               11125888888999998988888875522 1222   22357777888888888876643

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.45  E-value=0.01  Score=29.00  Aligned_cols=23  Identities=9%  Similarity=-0.224  Sum_probs=17.9

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhh
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNE  153 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~  153 (167)
                      +|.|.+|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            56788888888888888888763

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=95.25  E-value=0.011  Score=31.89  Aligned_cols=32  Identities=19%  Similarity=0.384  Sum_probs=27.5

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHT   78 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~   78 (167)
                      ...++..+.|+-|++.|.....+.+|....|.
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            34567789999999999999999999977774

>KOG2893|consensus

Probab=94.80  E-value=0.0095  Score=42.22  Aligned_cols=32  Identities=19%  Similarity=0.387  Sum_probs=24.1

Q ss_pred             cccccccccCCHHHHHHHHHHhcCCCCcccccchhhh
Q psy8167          55 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVA   91 (167)
Q Consensus        55 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~   91 (167)
                      .|=+|++.|....-|..|++..|     |+|-+|-+.
T Consensus        12 wcwycnrefddekiliqhqkakh-----fkchichkk   43 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH-----FKCHICHKK   43 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc-----ceeeeehhh
Confidence            48899999999999999996655     445544443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=94.35  E-value=0.072  Score=33.47  Aligned_cols=25  Identities=4%  Similarity=-0.120  Sum_probs=23.0

Q ss_pred             CCC----CchhhhcCCHHHHHHHHhhcCC
Q psy8167         132 PKL----MDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       132 ~~C----~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      |.|    ..|++.+.+...|++|++.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            889    9999999999999999998774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.95  E-value=0.055  Score=26.29  Aligned_cols=21  Identities=38%  Similarity=0.749  Sum_probs=19.3

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHI   73 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~   73 (167)
                      +|.|..|++.|.....+..|+
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             CeEccccCCccCCHHHHHHHH
Confidence            588999999999999998988

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2186|consensus

Probab=93.85  E-value=0.033  Score=39.85  Aligned_cols=46  Identities=15%  Similarity=0.156  Sum_probs=34.8

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHh
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLN  152 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  152 (167)
                      |.|..||-...- ..+.+|+.. .....|.|..|++.|-. ..++.|..
T Consensus         4 FtCnvCgEsvKK-p~vekH~sr-Crn~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSR-CRNAYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHh-ccCCeeEEeeccccccc-chhhhhhh
Confidence            678888866544 456678877 44478999999999988 78888875

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.24  E-value=0.065  Score=25.94  Aligned_cols=10  Identities=10%  Similarity=-0.546  Sum_probs=5.9

Q ss_pred             CCCCCCchhh
Q psy8167         130 ADPKLMDEQM  139 (167)
Q Consensus       130 ~~~~C~~C~~  139 (167)
                      .+..|++|+.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4566666653

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.07  E-value=0.016  Score=44.62  Aligned_cols=59  Identities=20%  Similarity=0.158  Sum_probs=52.9

Q ss_pred             CceecccccccccChhHHHHHHH--hhcCC--CCCCCC--chhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNR--IFHGG--ADPKLM--DEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      ..+.|..|...|.....+..|.+  .|.++  +++.|.  .|++.|.+...+.+|...|....+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPA  352 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcc
Confidence            36789999999999999999999  78999  899999  7999999999999999988765543

>KOG2482|consensus

Probab=93.06  E-value=0.14  Score=38.36  Aligned_cols=100  Identities=19%  Similarity=0.334  Sum_probs=65.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhcCCC-Ccccccchhhh-----------------------hhc--cc---cccc---
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHTQN-QPQHTNVIEVA-----------------------LGA--RA---NAAF---  100 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~-~~~~c~~c~~~-----------------------~~~--~~---~~~l---  100 (167)
                      .+.|-.|.+.|..+..|..||+.....+ .| +-....+-                       +..  .+   +..+   
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinP-knreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed  273 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINP-KNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNED  273 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCC-CccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcC
Confidence            4889999999999999999995532111 12 11111110                       000  00   0000   


Q ss_pred             ---cCceecccccccccChhHHHHHHHhhcC---------------------------CCCCCCCchhhhcCCHHHHHHH
Q psy8167         101 ---IDRIRCELCDKSFTRKDSLKKHNRIFHG---------------------------GADPKLMDEQMARGSADFLEVV  150 (167)
Q Consensus       101 ---~k~~~C~~C~k~f~~~~~l~~H~~~h~~---------------------------~~~~~C~~C~~~f~~~~~l~~H  150 (167)
                         .-...|-.|.........|..||.+-|.                           .+...|..|.-.|-....|..|
T Consensus       274 ~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~h  353 (423)
T KOG2482|consen  274 DAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIH  353 (423)
T ss_pred             CCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhh
Confidence               1113799999888888899999987663                           1235588899999999999999


Q ss_pred             Hhh
Q psy8167         151 LNE  153 (167)
Q Consensus       151 ~~~  153 (167)
                      +..
T Consensus       354 m~e  356 (423)
T KOG2482|consen  354 MVE  356 (423)
T ss_pred             ccc
Confidence            963

>KOG4173|consensus

Probab=92.87  E-value=0.053  Score=37.65  Aligned_cols=75  Identities=17%  Similarity=0.318  Sum_probs=56.2

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhc---
Q psy8167          53 RIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH---  127 (167)
Q Consensus        53 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~---  127 (167)
                      .|.|++  |-..|.....+..|....|+                         ..|..|.+.|.....|..|+..-|   
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~-------------------------~sCs~C~r~~Pt~hLLd~HI~E~HDs~  133 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG-------------------------NSCSFCKRAFPTGHLLDAHILEWHDSL  133 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc-------------------------chhHHHHHhCCchhhhhHHHHHHHHHH
Confidence            366776  66777777777777633332                         258999999999999988876544   


Q ss_pred             -------CCCCCCCCc--hhhhcCCHHHHHHHHh
Q psy8167         128 -------GGADPKLMD--EQMARGSADFLEVVLN  152 (167)
Q Consensus       128 -------~~~~~~C~~--C~~~f~~~~~l~~H~~  152 (167)
                             |...|+|-+  |+-.|.+...-+.|+-
T Consensus       134 Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I  167 (253)
T KOG4173|consen  134 FQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMI  167 (253)
T ss_pred             HHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHH
Confidence                   345688987  9999999999888884

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=92.44  E-value=0.068  Score=33.57  Aligned_cols=30  Identities=17%  Similarity=0.275  Sum_probs=17.6

Q ss_pred             ccccchhhhhhccccccccCceecccccccccCh
Q psy8167          83 QHTNVIEVALGARANAAFIDRIRCELCDKSFTRK  116 (167)
Q Consensus        83 ~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~  116 (167)
                      ..|+.||..|..  ...  .+..|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYD--Lnk--~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYD--LNK--DPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhcc--CCC--CCccCCCCCCccCcc
Confidence            456666666665  332  445577777666554

The function of members of this family is unknown.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=92.05  E-value=0.087  Score=26.23  Aligned_cols=33  Identities=21%  Similarity=0.371  Sum_probs=19.6

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCchhhhc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMAR  141 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  141 (167)
                      ..|+.|+..|.-...     ++..++...+|+.|+..|
T Consensus         3 i~CP~C~~~f~v~~~-----~l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDD-----KLPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             EECCCCCceEEcCHH-----HcccCCcEEECCCCCcEe
Confidence            357777777666544     112344467777777666

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=91.66  E-value=0.029  Score=39.77  Aligned_cols=43  Identities=21%  Similarity=0.258  Sum_probs=26.6

Q ss_pred             CceecccccccccChhHHHHHHHhhc----------CCCC-----CCCCchhhhcCCH
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFH----------GGAD-----PKLMDEQMARGSA  144 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~----------~~~~-----~~C~~C~~~f~~~  144 (167)
                      +.+.|++|++.|..........+.-.          +.-|     ..|+.||.+|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            45678888887777655444443211          1112     5699999988755

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=91.34  E-value=0.13  Score=25.44  Aligned_cols=33  Identities=18%  Similarity=0.248  Sum_probs=20.6

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCchhhhc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMAR  141 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  141 (167)
                      +.|+.|+..|.-....     +-..+...+|+.|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~-----ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEK-----IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHH-----CCCCCcEEECCCCCCEe
Confidence            4677777777766552     22334467777777766

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.13  E-value=0.11  Score=40.09  Aligned_cols=108  Identities=18%  Similarity=0.181  Sum_probs=71.6

Q ss_pred             CcccccccccccCCHHHHHHHHHH-hcCCC--Cccccc--chhhhhhccccccc--------------------------
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRI-FHTQN--QPQHTN--VIEVALGARANAAF--------------------------  100 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~-~h~~~--~~~~c~--~c~~~~~~~~~~~l--------------------------  100 (167)
                      .++.|..|...|.....|..|.+. .|.++  +++.|+  .|++.|..  ...+                          
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSR--NDALKRHILLHTSISPAKEKLLNSSSKFSP  365 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccc--cccccCCcccccCCCccccccccCcccccc
Confidence            368889999999999999999842 78888  888888  78888866  3322                          


Q ss_pred             ------------------cCceec--ccccccccChhHHHHHHHhhcCCC--CCCCCchhhhcCCHHHHHHHHhhcCCCC
Q psy8167         101 ------------------IDRIRC--ELCDKSFTRKDSLKKHNRIFHGGA--DPKLMDEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       101 ------------------~k~~~C--~~C~k~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                                        .+.+.+  ..|...+.....+..|...|....  .+.+..|.+.|.....+..|++.+....
T Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (467)
T COG5048         366 LLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHA  445 (467)
T ss_pred             ccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCC
Confidence                              000111  224445555555555555544444  4556678888888888888888776555


Q ss_pred             Ccc
Q psy8167         159 PVS  161 (167)
Q Consensus       159 ~~~  161 (167)
                      ++.
T Consensus       446 ~~~  448 (467)
T COG5048         446 PLL  448 (467)
T ss_pred             cee
Confidence            443

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=90.78  E-value=0.13  Score=26.89  Aligned_cols=9  Identities=33%  Similarity=1.040  Sum_probs=4.9

Q ss_pred             eeccccccc
Q psy8167         104 IRCELCDKS  112 (167)
Q Consensus       104 ~~C~~C~k~  112 (167)
                      ++|+.||..
T Consensus        22 ~~Cp~CG~~   30 (46)
T PRK00398         22 VRCPYCGYR   30 (46)
T ss_pred             eECCCCCCe
Confidence            456666543

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=90.63  E-value=0.15  Score=27.98  Aligned_cols=31  Identities=10%  Similarity=0.084  Sum_probs=16.2

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCchhh
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQM  139 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~  139 (167)
                      |.|+.||..-..+..--+     .-..+|.|+.||.
T Consensus        28 F~CPnCGe~~I~Rc~~CR-----k~g~~Y~Cp~CGF   58 (61)
T COG2888          28 FPCPNCGEVEIYRCAKCR-----KLGNPYRCPKCGF   58 (61)
T ss_pred             eeCCCCCceeeehhhhHH-----HcCCceECCCcCc
Confidence            556666644444332111     1234788888875

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=90.36  E-value=0.38  Score=36.26  Aligned_cols=78  Identities=19%  Similarity=0.171  Sum_probs=46.5

Q ss_pred             cccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167          55 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus        55 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      .|..|...|-....|..|++..|     -.|-+|.+.-..  ..            .-|.....|..|.+.    .-|.|
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~H-----E~ChICD~v~p~--~~------------QYFK~Y~~Le~HF~~----~hy~c  278 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRH-----EACHICDMVGPI--RY------------QYFKSYEDLEAHFRN----AHYCC  278 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhh-----hhhhhhhccCcc--ch------------hhhhCHHHHHHHhhc----CceEE
Confidence            59999999999999999997766     345555443211  00            134444555555443    23555


Q ss_pred             Cc--h----hhhcCCHHHHHHHHhhcC
Q psy8167         135 MD--E----QMARGSADFLEVVLNEDG  155 (167)
Q Consensus       135 ~~--C----~~~f~~~~~l~~H~~~~~  155 (167)
                      ..  |    -..|.....|..|+...|
T Consensus       279 t~qtc~~~k~~vf~~~~el~~h~~~~h  305 (493)
T COG5236         279 TFQTCRVGKCYVFPYHTELLEHLTRFH  305 (493)
T ss_pred             EEEEEecCcEEEeccHHHHHHHHHHHh
Confidence            53  3    145666667777765433

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=90.14  E-value=0.15  Score=25.40  Aligned_cols=33  Identities=24%  Similarity=0.261  Sum_probs=16.4

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCchhhhc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMAR  141 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  141 (167)
                      +.|+.|+..|.-.....     ...+....|+.|+..|
T Consensus         3 ~~CP~C~~~~~v~~~~~-----~~~~~~v~C~~C~~~~   35 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL-----GANGGKVRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEEEeCHHHc-----CCCCCEEECCCCCCEE
Confidence            45666666655543321     1112245666666555

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG2893|consensus

Probab=89.91  E-value=0.058  Score=38.38  Aligned_cols=41  Identities=20%  Similarity=0.216  Sum_probs=33.1

Q ss_pred             cccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHH
Q psy8167         106 CELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVV  150 (167)
Q Consensus       106 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  150 (167)
                      |=+|++.|.....|.+|++.    +-|+|.+|-|...+.--|.-|
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceee
Confidence            78899999999999999876    679999998776665555444

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=89.89  E-value=0.17  Score=23.09  Aligned_cols=9  Identities=33%  Similarity=0.962  Sum_probs=5.0

Q ss_pred             ccccccccc
Q psy8167         106 CELCDKSFT  114 (167)
Q Consensus       106 C~~C~k~f~  114 (167)
                      |+.||..|.
T Consensus        17 Cp~CG~~F~   25 (26)
T PF10571_consen   17 CPHCGYDFE   25 (26)
T ss_pred             CCCCCCCCc
Confidence            555655553

Several members are annotated as putative helicases.

>KOG2231|consensus

Probab=89.75  E-value=0.43  Score=39.32  Aligned_cols=53  Identities=25%  Similarity=0.465  Sum_probs=33.6

Q ss_pred             cccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhc
Q psy8167          55 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus        55 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      .|..|...|.....|.+|++..|     |.|..|.+.               ..++.-|.....|..|-+.+|
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h-----~~chfC~~~---------------~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH-----EFCHFCDYK---------------TGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce-----eheeecCcc---------------cccchhcccchHHHHHhhhcC
Confidence            58888888888888888885544     445554321               112345666677777777655

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=89.36  E-value=0.28  Score=23.88  Aligned_cols=9  Identities=11%  Similarity=-0.382  Sum_probs=5.3

Q ss_pred             CCCCCchhh
Q psy8167         131 DPKLMDEQM  139 (167)
Q Consensus       131 ~~~C~~C~~  139 (167)
                      |..|++|+.
T Consensus        18 p~~CP~Cg~   26 (34)
T cd00729          18 PEKCPICGA   26 (34)
T ss_pred             CCcCcCCCC
Confidence            456666654

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2482|consensus

Probab=89.34  E-value=0.37  Score=36.23  Aligned_cols=70  Identities=26%  Similarity=0.524  Sum_probs=41.1

Q ss_pred             ccccccccccC-CHHHHHHHHHHhcCCC--CcccccchhhhhhccccccccCceecccccccccChhHHHHHHHh
Q psy8167          54 IPCTLCDKTFT-RKDSLKKHIRIFHTQN--QPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus        54 ~~C~~C~~~f~-~~~~l~~H~~~~h~~~--~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      ..|-.|+..+. .++....|+...|.-.  .|-.--.+.+....  ...-...+.|-.|.+.|..+..|+.||+.
T Consensus       145 lqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLeh--LkekL~r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  145 LQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEH--LKEKLERLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             eEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHH--HHHHHhhheeeeeccccCCcHHHHHHHHh
Confidence            56888887655 6677778876666322  11111111111100  00002346899999999999999999985

>PHA00626 hypothetical protein

Probab=88.83  E-value=0.075  Score=28.78  Aligned_cols=14  Identities=14%  Similarity=-0.055  Sum_probs=8.9

Q ss_pred             CCCCCchhhhcCCH
Q psy8167         131 DPKLMDEQMARGSA  144 (167)
Q Consensus       131 ~~~C~~C~~~f~~~  144 (167)
                      .|+|..||+.|..-
T Consensus        23 rYkCkdCGY~ft~~   36 (59)
T PHA00626         23 DYVCCDCGYNDSKD   36 (59)
T ss_pred             ceEcCCCCCeechh
Confidence            56666676666544

>TIGR00622 ssl1 transcription factor ssl1

Probab=88.35  E-value=0.77  Score=28.96  Aligned_cols=22  Identities=18%  Similarity=0.434  Sum_probs=17.7

Q ss_pred             CcccccccccccCCHHHHHHHH
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHI   73 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~   73 (167)
                      -|..|+.||-.......|.+-.
T Consensus        14 LP~~CpiCgLtLVss~HLARSy   35 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSY   35 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhh
Confidence            4577999999888888887765

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=88.30  E-value=0.096  Score=37.01  Aligned_cols=23  Identities=4%  Similarity=-0.158  Sum_probs=10.6

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhh
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNE  153 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~  153 (167)
                      +|.|..|+|.|......+.|+..
T Consensus        77 K~~C~lc~KlFkg~eFV~KHI~n   99 (214)
T PF04959_consen   77 KWRCPLCGKLFKGPEFVRKHIFN   99 (214)
T ss_dssp             EEEE-SSS-EESSHHHHHHHHHH
T ss_pred             EECCCCCCcccCChHHHHHHHhh
Confidence            35555555555555555555543

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=88.09  E-value=0.13  Score=35.34  Aligned_cols=29  Identities=14%  Similarity=0.192  Sum_probs=14.8

Q ss_pred             cccccchhhhhhccccccccCceeccccccc
Q psy8167          82 PQHTNVIEVALGARANAAFIDRIRCELCDKS  112 (167)
Q Consensus        82 ~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~  112 (167)
                      -|.|+.|+..|..  ..++...|.|+.||..
T Consensus       117 ~Y~Cp~C~~rytf--~eA~~~~F~Cp~Cg~~  145 (178)
T PRK06266        117 FFFCPNCHIRFTF--DEAMEYGFRCPQCGEM  145 (178)
T ss_pred             EEECCCCCcEEeH--HHHhhcCCcCCCCCCC
Confidence            3555555555554  3344444555555543

>PF15135 UPF0515: Uncharacterised protein UPF0515

Probab=87.76  E-value=0.48  Score=34.02  Aligned_cols=12  Identities=25%  Similarity=0.684  Sum_probs=8.8

Q ss_pred             CCCccccccccc
Q psy8167          50 PIDRIPCTLCDK   61 (167)
Q Consensus        50 ~~~~~~C~~C~~   61 (167)
                      ..+.|.|..|..
T Consensus       109 ~drqFaC~~Cd~  120 (278)
T PF15135_consen  109 VDRQFACSSCDH  120 (278)
T ss_pred             cceeeeccccch
Confidence            346788888875

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=87.69  E-value=0.16  Score=36.64  Aligned_cols=89  Identities=13%  Similarity=0.203  Sum_probs=50.5

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHhc-CCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHh---
Q psy8167          50 PIDRIPCTLCDKTFTRKDSLKKHIRIFH-TQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRI---  125 (167)
Q Consensus        50 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h-~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~---  125 (167)
                      +.+.|+|.+|+...-....| .|+..-. .....|+|..|.+.- +         |.|..|.-.|-..     |.+.   
T Consensus       139 GGrif~CsfC~~flCEDDQF-EHQAsCQvLe~E~~KC~SCNrlG-q---------~sCLRCK~cfCdd-----HvrrKg~  202 (314)
T PF06524_consen  139 GGRIFKCSFCDNFLCEDDQF-EHQASCQVLESETFKCQSCNRLG-Q---------YSCLRCKICFCDD-----HVRRKGF  202 (314)
T ss_pred             CCeEEEeecCCCeeeccchh-hhhhhhhhhhccccccccccccc-c---------hhhhheeeeehhh-----hhhhccc
Confidence            34678888888655555544 6662211 223467777776432 2         3455554444332     3332   


Q ss_pred             -hcCCCCCCCCchhhhcCCHHHHHHHHhhc
Q psy8167         126 -FHGGADPKLMDEQMARGSADFLEVVLNED  154 (167)
Q Consensus       126 -h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  154 (167)
                       -...+++.|+.|++-...-..|..-.|.|
T Consensus       203 ky~k~k~~PCPKCg~et~eTkdLSmStR~h  232 (314)
T PF06524_consen  203 KYEKGKPIPCPKCGYETQETKDLSMSTRSH  232 (314)
T ss_pred             ccccCCCCCCCCCCCcccccccceeeeecc
Confidence             13457888999988777777665555544

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=87.56  E-value=0.17  Score=27.08  Aligned_cols=29  Identities=14%  Similarity=0.244  Sum_probs=16.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCchhh
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQM  139 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~  139 (167)
                      |+|..||..|.....+.       .+....|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~~-------~~~~~~CP~Cg~   34 (52)
T TIGR02605         6 YRCTACGHRFEVLQKMS-------DDPLATCPECGG   34 (52)
T ss_pred             EEeCCCCCEeEEEEecC-------CCCCCCCCCCCC
Confidence            66777777666442211       134556777765

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=87.29  E-value=0.34  Score=32.64  Aligned_cols=29  Identities=17%  Similarity=0.111  Sum_probs=15.2

Q ss_pred             cccccchhhhhhccccccccCceeccccccc
Q psy8167          82 PQHTNVIEVALGARANAAFIDRIRCELCDKS  112 (167)
Q Consensus        82 ~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~  112 (167)
                      -|.|+.|+..|..  .-++...|.|+.||..
T Consensus       109 ~Y~Cp~c~~r~tf--~eA~~~~F~Cp~Cg~~  137 (158)
T TIGR00373       109 FFICPNMCVRFTF--NEAMELNFTCPRCGAM  137 (158)
T ss_pred             eEECCCCCcEeeH--HHHHHcCCcCCCCCCE
Confidence            4555555555555  4444444566666543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=87.06  E-value=0.38  Score=32.60  Aligned_cols=23  Identities=17%  Similarity=0.174  Sum_probs=15.5

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCchh
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQ  138 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~  138 (167)
                      .|.|++||..             +-++.|-+|++||
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCC
Confidence            4778888743             3456677788886

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=86.09  E-value=0.28  Score=25.09  Aligned_cols=13  Identities=38%  Similarity=0.807  Sum_probs=7.0

Q ss_pred             eecccccccccCh
Q psy8167         104 IRCELCDKSFTRK  116 (167)
Q Consensus       104 ~~C~~C~k~f~~~  116 (167)
                      |+|..||..|...
T Consensus         6 y~C~~Cg~~fe~~   18 (42)
T PF09723_consen    6 YRCEECGHEFEVL   18 (42)
T ss_pred             EEeCCCCCEEEEE
Confidence            4555555555543

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=86.04  E-value=0.79  Score=23.56  Aligned_cols=27  Identities=26%  Similarity=0.604  Sum_probs=17.5

Q ss_pred             CCcccccccccccCCH----HHHHHHHHHhc
Q psy8167          51 IDRIPCTLCDKTFTRK----DSLKKHIRIFH   77 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~----~~l~~H~~~~h   77 (167)
                      .....|..|++.+...    ..|.+|++..|
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            3567899999988875    78888885544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>smart00614 ZnF_BED BED zinc finger

Probab=85.93  E-value=0.72  Score=24.50  Aligned_cols=21  Identities=33%  Similarity=0.893  Sum_probs=16.0

Q ss_pred             eecccccccccCh-----hHHHHHHH
Q psy8167         104 IRCELCDKSFTRK-----DSLKKHNR  124 (167)
Q Consensus       104 ~~C~~C~k~f~~~-----~~l~~H~~  124 (167)
                      -.|..|++.+...     ++|.+|++
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            3688888888665     58888887

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=85.80  E-value=1.6  Score=33.08  Aligned_cols=92  Identities=20%  Similarity=0.234  Sum_probs=62.1

Q ss_pred             ccccc--cccccCCHHHHHHHHHHhcCCCCcccccchhh---hhhccccccc---------------cCce----ecccc
Q psy8167          54 IPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEV---ALGARANAAF---------------IDRI----RCELC  109 (167)
Q Consensus        54 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~---~~~~~~~~~l---------------~k~~----~C~~C  109 (167)
                      |.|+.  |.........|..|.+..|.   -+-|..|-.   .|..  ...|               +..|    .|..|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~---~~~C~~C~~nKk~F~~--E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC  226 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG---FVLCSECIGNKKDFWN--EIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFC  226 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC---cEEhHhhhcCcccCcc--ceeeeecccccccccCCccccCcCCCchhhhc
Confidence            77874  77777778889999866663   355655543   2222  1111               1112    59999


Q ss_pred             cccccChhHHHHHHHhhcCCCCCCCCchh-------hhcCCHHHHHHHHhhc
Q psy8167         110 DKSFTRKDSLKKHNRIFHGGADPKLMDEQ-------MARGSADFLEVVLNED  154 (167)
Q Consensus       110 ~k~f~~~~~l~~H~~~h~~~~~~~C~~C~-------~~f~~~~~l~~H~~~~  154 (167)
                      .+.|-....|..|+|..|    -.|-+|+       +.|....+|..|-+.-
T Consensus       227 ~~~FYdDDEL~~HcR~~H----E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~  274 (493)
T COG5236         227 KIYFYDDDELRRHCRLRH----EACHICDMVGPIRYQYFKSYEDLEAHFRNA  274 (493)
T ss_pred             cceecChHHHHHHHHhhh----hhhhhhhccCccchhhhhCHHHHHHHhhcC
Confidence            999999999999998744    2455664       5788999999998743

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=85.74  E-value=0.33  Score=31.61  Aligned_cols=23  Identities=43%  Similarity=0.700  Sum_probs=13.2

Q ss_pred             eecccccccccChhHHHHHHHhhcCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      ..|-+||+.|...   .+|++.|||.
T Consensus        73 i~clecGk~~k~L---krHL~~~~gl   95 (132)
T PF05443_consen   73 IICLECGKKFKTL---KRHLRTHHGL   95 (132)
T ss_dssp             EE-TBT--EESBH---HHHHHHTT-S
T ss_pred             eEEccCCcccchH---HHHHHHccCC
Confidence            4677788777663   6777777665

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=85.58  E-value=0.42  Score=30.71  Aligned_cols=30  Identities=3%  Similarity=-0.120  Sum_probs=15.5

Q ss_pred             ccccchhhhhhccccccccCceecccccccccCh
Q psy8167          83 QHTNVIEVALGARANAAFIDRIRCELCDKSFTRK  116 (167)
Q Consensus        83 ~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~  116 (167)
                      ..|+.||..|..  ..  ..+..|+.||..|...
T Consensus        10 r~Cp~cg~kFYD--Ln--k~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYD--LN--RRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCccccc--cC--CCCccCCCcCCccCcc
Confidence            455566655554  22  1334566666655444

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=84.98  E-value=0.29  Score=32.56  Aligned_cols=13  Identities=23%  Similarity=0.639  Sum_probs=7.2

Q ss_pred             eecccccccccCh
Q psy8167         104 IRCELCDKSFTRK  116 (167)
Q Consensus       104 ~~C~~C~k~f~~~  116 (167)
                      |.|+.|+..|...
T Consensus       100 Y~Cp~C~~~y~~~  112 (147)
T smart00531      100 YKCPNCQSKYTFL  112 (147)
T ss_pred             EECcCCCCEeeHH
Confidence            5566666555543

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=84.88  E-value=0.41  Score=32.47  Aligned_cols=23  Identities=13%  Similarity=0.114  Sum_probs=16.4

Q ss_pred             cccccchhhhhhccccccccCceeccccc
Q psy8167          82 PQHTNVIEVALGARANAAFIDRIRCELCD  110 (167)
Q Consensus        82 ~~~c~~c~~~~~~~~~~~l~k~~~C~~C~  110 (167)
                      .|.|++||..+..      +-|-.|++||
T Consensus       134 ~~vC~vCGy~~~g------e~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYTHEG------EAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCcccC------CCCCcCCCCC
Confidence            4777777777665      5556788887

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=84.46  E-value=0.49  Score=26.07  Aligned_cols=10  Identities=0%  Similarity=-0.323  Sum_probs=7.0

Q ss_pred             CCCCCCchhh
Q psy8167         130 ADPKLMDEQM  139 (167)
Q Consensus       130 ~~~~C~~C~~  139 (167)
                      .+|.|+.||.
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            4777777775

>KOG2785|consensus

Probab=83.84  E-value=1.2  Score=34.01  Aligned_cols=50  Identities=18%  Similarity=0.125  Sum_probs=43.3

Q ss_pred             eecccccccccChhHHHHHHHhhcCC-----------------------CCCCCCchh---hhcCCHHHHHHHHhh
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGG-----------------------ADPKLMDEQ---MARGSADFLEVVLNE  153 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  153 (167)
                      -.|-.|++.+........||..+|+-                       .-+-|-.|+   +.|.+-...+.||..
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            46999999999999999999999872                       236788898   999999999999973

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=83.82  E-value=0.46  Score=31.88  Aligned_cols=12  Identities=0%  Similarity=-0.114  Sum_probs=6.3

Q ss_pred             ccccchhhhhhc
Q psy8167          83 QHTNVIEVALGA   94 (167)
Q Consensus        83 ~~c~~c~~~~~~   94 (167)
                      +.|+.||++|..
T Consensus        29 ~~c~~c~~~f~~   40 (154)
T PRK00464         29 RECLACGKRFTT   40 (154)
T ss_pred             eeccccCCcceE
Confidence            455555555544

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=83.68  E-value=0.69  Score=30.16  Aligned_cols=31  Identities=6%  Similarity=-0.187  Sum_probs=19.8

Q ss_pred             cCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         127 HGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       127 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      ..+....|-+||+.|..-   ++|++.||+..|.
T Consensus        68 I~~d~i~clecGk~~k~L---krHL~~~~gltp~   98 (132)
T PF05443_consen   68 ITPDYIICLECGKKFKTL---KRHLRTHHGLTPE   98 (132)
T ss_dssp             B-SS-EE-TBT--EESBH---HHHHHHTT-S-HH
T ss_pred             cccCeeEEccCCcccchH---HHHHHHccCCCHH
Confidence            455678899999999885   9999999876654

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon [Transcription]

Probab=83.60  E-value=0.53  Score=28.29  Aligned_cols=27  Identities=15%  Similarity=0.354  Sum_probs=13.2

Q ss_pred             CcccccchhhhhhccccccccCceeccccc
Q psy8167          81 QPQHTNVIEVALGARANAAFIDRIRCELCD  110 (167)
Q Consensus        81 ~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~  110 (167)
                      +|-.|..||+.|..   ..+.++-+|+.|.
T Consensus        57 ~Pa~CkkCGfef~~---~~ik~pSRCP~CK   83 (97)
T COG3357          57 RPARCKKCGFEFRD---DKIKKPSRCPKCK   83 (97)
T ss_pred             cChhhcccCccccc---cccCCcccCCcch
Confidence            35556666555544   2233344555553

>KOG2785|consensus

Probab=83.49  E-value=1.5  Score=33.60  Aligned_cols=73  Identities=19%  Similarity=0.248  Sum_probs=46.4

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCCCc---ccccchhhhhhccccccccCceeccccc---ccccChhHHHHHHH
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQP---QHTNVIEVALGARANAAFIDRIRCELCD---KSFTRKDSLKKHNR  124 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~---~~c~~c~~~~~~~~~~~l~k~~~C~~C~---k~f~~~~~l~~H~~  124 (167)
                      ..|--|-.|+..+.....-..||...|.---|   |--..=|-.-.-  ...+...|.|-.|.   +.|......+.||.
T Consensus       164 ~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YL--geKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  164 LIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYL--GEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             cCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHH--HHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            34567999999999999999999665532111   111111100000  11115557788888   99999999999997


Q ss_pred             h
Q psy8167         125 I  125 (167)
Q Consensus       125 ~  125 (167)
                      -
T Consensus       242 ~  242 (390)
T KOG2785|consen  242 D  242 (390)
T ss_pred             h
Confidence            4

>KOG2186|consensus

Probab=83.07  E-value=0.68  Score=33.38  Aligned_cols=38  Identities=11%  Similarity=0.237  Sum_probs=23.4

Q ss_pred             cccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhh
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALG   93 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~   93 (167)
                      .|.|..||....-. .+.+|+.+.+.  .-|.|..|+..|.
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn--~~fSCIDC~k~F~   40 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRN--AYFSCIDCGKTFE   40 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccC--CeeEEeecccccc
Confidence            58899999876544 46679855442  3444544444443

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=82.96  E-value=0.53  Score=23.62  Aligned_cols=12  Identities=42%  Similarity=0.935  Sum_probs=6.7

Q ss_pred             eecccccccccC
Q psy8167         104 IRCELCDKSFTR  115 (167)
Q Consensus       104 ~~C~~C~k~f~~  115 (167)
                      |+|..||..|..
T Consensus         6 y~C~~Cg~~fe~   17 (41)
T smart00834        6 YRCEDCGHTFEV   17 (41)
T ss_pred             EEcCCCCCEEEE
Confidence            456666655544

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.84  E-value=0.15  Score=36.20  Aligned_cols=22  Identities=32%  Similarity=0.703  Sum_probs=15.3

Q ss_pred             CcccccccccccCCHHHHHHHH
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHI   73 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~   73 (167)
                      +...|++|+..|....-.....
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~   25 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKI   25 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCc
Confidence            4578999999888775443333

>KOG4167|consensus

Probab=82.63  E-value=0.34  Score=40.06  Aligned_cols=27  Identities=22%  Similarity=0.406  Sum_probs=23.8

Q ss_pred             cCceecccccccccChhHHHHHHHhhc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      ..-|.|..|+|.|..-..+..||++|.
T Consensus       790 ~giFpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  790 TGIFPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             CceeehHHHHHHHHHHhhhhHHHHHHH
Confidence            344899999999999999999999975

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=82.48  E-value=0.86  Score=23.62  Aligned_cols=11  Identities=0%  Similarity=-0.408  Sum_probs=5.0

Q ss_pred             ccccchhhhhh
Q psy8167          83 QHTNVIEVALG   93 (167)
Q Consensus        83 ~~c~~c~~~~~   93 (167)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            44444444443

present in RNA polymerase I, II and III

>PF14353 CpXC: CpXC protein

Probab=82.30  E-value=0.63  Score=30.07  Aligned_cols=11  Identities=27%  Similarity=0.776  Sum_probs=6.6

Q ss_pred             cccccccccCC
Q psy8167          55 PCTLCDKTFTR   65 (167)
Q Consensus        55 ~C~~C~~~f~~   65 (167)
                      .|+.|+..|..
T Consensus         3 tCP~C~~~~~~   13 (128)
T PF14353_consen    3 TCPHCGHEFEF   13 (128)
T ss_pred             CCCCCCCeeEE
Confidence            46666665543

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=82.29  E-value=1.3  Score=20.07  Aligned_cols=19  Identities=16%  Similarity=0.546  Sum_probs=13.5

Q ss_pred             ecccccccccChhHHHHHHH
Q psy8167         105 RCELCDKSFTRKDSLKKHNR  124 (167)
Q Consensus       105 ~C~~C~k~f~~~~~l~~H~~  124 (167)
                      .|++|++.+ ....+..|+.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            578888777 5567777765

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>cd00730 rubredoxin Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center

Probab=82.16  E-value=0.65  Score=24.82  Aligned_cols=9  Identities=33%  Similarity=0.925  Sum_probs=4.7

Q ss_pred             Cceeccccc
Q psy8167         102 DRIRCELCD  110 (167)
Q Consensus       102 k~~~C~~C~  110 (167)
                      ..|.|++|+
T Consensus        33 ~~w~CP~C~   41 (50)
T cd00730          33 DDWVCPVCG   41 (50)
T ss_pred             CCCCCCCCC
Confidence            335555555

Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They are believed to be involved in electron transfer.

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=82.02  E-value=0.98  Score=32.02  Aligned_cols=31  Identities=32%  Similarity=0.568  Sum_probs=23.9

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          50 PIDRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        50 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      .+..|.|..|+|.|.-......|+...|...
T Consensus        74 ~~~K~~C~lc~KlFkg~eFV~KHI~nKH~e~  104 (214)
T PF04959_consen   74 DEDKWRCPLCGKLFKGPEFVRKHIFNKHPEK  104 (214)
T ss_dssp             SSEEEEE-SSS-EESSHHHHHHHHHHH-HHH
T ss_pred             cCCEECCCCCCcccCChHHHHHHHhhcCHHH
Confidence            3456999999999999999999998888653

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=80.62  E-value=0.8  Score=24.29  Aligned_cols=7  Identities=57%  Similarity=1.488  Sum_probs=3.7

Q ss_pred             eeccccc
Q psy8167         104 IRCELCD  110 (167)
Q Consensus       104 ~~C~~C~  110 (167)
                      .+|+.||
T Consensus        25 irCp~Cg   31 (49)
T COG1996          25 IRCPYCG   31 (49)
T ss_pred             eeCCCCC
Confidence            4555555

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	167
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	9e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-04

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 65.5 bits (160), Expect = 4e-15
 Identities = 20/78 (25%), Positives = 25/78 (32%), Gaps = 19/78 (24%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C  T  +K SL  H R  H +              A        R  CE C K F +
Sbjct: 10  CEICGFTCRQKASLNWHQRK-HAETV-----------AAL-------RFPCEFCGKRFEK 50

Query: 116 KDSLKKHNRIFHGGADPK 133
            DS+  H    H      
Sbjct: 51  PDSVAAHRSKSHPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 44.3 bits (105), Expect = 5e-07
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 55 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQ 83
          PC  C K F + DS+  H    H      
Sbjct: 40 PCEFCGKRFEKPDSVAAHRSKSHPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 105 RCELCDKSFTRKDSLKKHNRI 125
           +CE+C  +  +K SL  H R 
Sbjct: 9   QCEICGFTCRQKASLNWHQRK 29

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 20/77 (25%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C   FT+  ++K HI   HT+N  +                      C  CD    R
Sbjct: 18  CYICHARFTQSGTMKMHILQKHTENVAKF--------------------HCPHCDTVIAR 57

Query: 116 KDSLKKHNRIFHGGADP 132
           K  L  H R  H  + P
Sbjct: 58  KSDLGVHLRKQHSYSGP 74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 22/65 (33%)

Query: 68  SLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH 127
           S     R  H+  +P                       C +C   FT+  ++K H    H
Sbjct: 2   SSGSSGRT-HSGEKP---------------------YECYICHARFTQSGTMKMHILQKH 39

Query: 128 GGADP 132
                
Sbjct: 40  TENVA 44

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 59.1 bits (144), Expect = 9e-13
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 20/73 (27%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C + +T   +  +H    H        NV                  C  C K FTR
Sbjct: 13  CKVCSRVYTHISNFCRHYVTSH------KRNV--------------KVYPCPFCFKEFTR 52

Query: 116 KDSLKKHNRIFHG 128
           KD++  H +I H 
Sbjct: 53  KDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 55 PCTLCDKTFTRKDSLKKHIRIFH 77
          PC  C K FTRKD++  H++I H
Sbjct: 42 PCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 6/23 (26%), Positives = 12/23 (52%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFH 127
           RC++C + +T   +  +H    H
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSH 34

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.8 bits (133), Expect = 7e-11
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 22/70 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C + F+R D L  HIR  HT  +P                       C++C + F R
Sbjct: 6   CRICMRNFSRSDHLTTHIRT-HTGEKP---------------------FACDICGRKFAR 43

Query: 116 KDSLKKHNRI 125
            D  K+H  I
Sbjct: 44  SDERKRHRDI 53

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 49.8 bits (120), Expect = 5e-09
 Identities = 11/69 (15%), Positives = 20/69 (28%), Gaps = 23/69 (33%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C + F R D  K+H  I      P                     I  +  ++  ++
Sbjct: 34  CDICGRKFARSDERKRHRDI-QHI-LP---------------------ILEDKVEELLSK 70

Query: 116 KDSLKKHNR 124
              L+    
Sbjct: 71  NYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHGG 129
           +C +C ++F+R D L  H R  H G
Sbjct: 5   QCRICMRNFSRSDHLTTHIRT-HTG 28

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 54.0 bits (131), Expect = 9e-11
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 22/73 (30%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C+ C  + + K +L+ H RI H  ++P                      +C  C     +
Sbjct: 12  CSECSYSCSSKAALRIHERI-HCTDRP---------------------FKCNYCSFDTKQ 49

Query: 116 KDSLKKHNRIFHG 128
             +L KH + FHG
Sbjct: 50  PSNLSKHMKKFHG 62

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.0 bits (131), Expect = 1e-10
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C + F+R D L  HIR  HT  +P                       C++C + F R
Sbjct: 37  CRICMRNFSRSDHLTTHIRT-HTGEKP---------------------FACDICGRKFAR 74

Query: 116 KDSLKKHNRIFHGG 129
            D  K+H +I H  
Sbjct: 75  SDERKRHTKI-HLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 50.5 bits (122), Expect = 2e-09
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 23/71 (32%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           CD+ F++  SL +HIRI HT  +P                      +C +C ++F+R D 
Sbjct: 12  CDRRFSQSGSLTRHIRI-HTGQKP---------------------FQCRICMRNFSRSDH 49

Query: 119 LKKHNRIFHGG 129
           L  H R  H G
Sbjct: 50  LTTHIRT-HTG 59

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 22/67 (32%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           CD  F R D L +H R         HT       GA+         +C +C++SF+R D 
Sbjct: 53  CDWRFARSDELTRHYRK--------HT-------GAK-------PFQCGVCNRSFSRSDH 90

Query: 119 LKKHNRI 125
           L  H + 
Sbjct: 91  LALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 25/76 (32%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRC--ELCDKSFTRK 116
           C K +T+   LK H+R  HT  +P                      +C  E CD  F R 
Sbjct: 23  CTKVYTKSSHLKAHLRT-HTGEKP---------------------YKCTWEGCDWRFARS 60

Query: 117 DSLKKHNRIFHGGADP 132
           D L +H R  H GA P
Sbjct: 61  DELTRHYRK-HTGAKP 75

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.8 bits (91), Expect = 8e-05
 Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHT 78
          C +C+++F+R D L  H++  H 
Sbjct: 78 CGVCNRSFSRSDHLALHMKR-HQ 99

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 22/74 (29%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C + F R++ LK+H R  HT  +P                       C LC+++FTR
Sbjct: 5   CEVCTRAFARQEHLKRHYRS-HTNEKPYP---------------------CGLCNRAFTR 42

Query: 116 KDSLKKHNRIFHGG 129
           +D L +H +  H G
Sbjct: 43  RDLLIRHAQKIHSG 56

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.9 bits (128), Expect = 3e-10
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 22/67 (32%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           C   F R D L +H R         HT       G R         +C+ CD++F+R D 
Sbjct: 43  CGWKFARSDELTRHYRK--------HT-------GHR-------PFQCQKCDRAFSRSDH 80

Query: 119 LKKHNRI 125
           L  H + 
Sbjct: 81  LALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 21/78 (26%)

Query: 55  PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT 114
               C KT+T+   LK H+R  HT  +P H +                      C   F 
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDG-------------------CGWKFA 48

Query: 115 RKDSLKKHNRIFHGGADP 132
           R D L +H R  H G  P
Sbjct: 49  RSDELTRHYRK-HTGHRP 65

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 52.3 bits (126), Expect = 5e-10
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 22/67 (32%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           CD+ F+R D L +HIRI        HT       G +         +C +C ++F+R D 
Sbjct: 27  CDRRFSRSDELTRHIRI--------HT-------GQK-------PFQCRICMRNFSRSDH 64

Query: 119 LKKHNRI 125
           L  H R 
Sbjct: 65  LTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)

Query: 55 PCTLCDKTFTRKDSLKKHIRIFHT 78
           C +C + F+R D L  HIR  HT
Sbjct: 51 QCRICMRNFSRSDHLTTHIRT-HT 73

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 26/79 (32%)

Query: 55  PCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCD 110
           PC    C + F+ +  L  H +  H   +                        C    C 
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKS---------------------FSCPEPACG 47

Query: 111 KSFTRKDSLKKHNRIFHGG 129
           KSF  K  LK+H ++ H  
Sbjct: 48  KSFNFKKHLKEHMKL-HSD 65

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 51.3 bits (124), Expect = 1e-09
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C K F+RKD LK H+R  HT  +P                      +C+ CD +   
Sbjct: 11  CEVCGKCFSRKDKLKTHMRC-HTGVKP---------------------YKCKTCDYAAAD 48

Query: 116 KDSLKKHNRIFHGG 129
             SL KH RI H  
Sbjct: 49  SSSLNKHLRI-HSD 61

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 50.5 bits (122), Expect = 4e-09
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  CD       SL KH+RI H+  +P                      +C++C  +   
Sbjct: 39  CKTCDYAAADSSSLNKHLRI-HSDERP---------------------FKCQICPYASRN 76

Query: 116 KDSLKKHNRIFHGG 129
              L  H R  H G
Sbjct: 77  SSQLTVHLRS-HTG 89

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 19/75 (25%), Positives = 26/75 (34%), Gaps = 14/75 (18%)

Query: 55  PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT 114
           P   CD+TF+    L  H+ +      P+  N +                 C    KSF 
Sbjct: 27  PKKSCDRTFSTMHELVTHVTM-EHVGGPEQNNHVCYWEE------------CPREGKSFK 73

Query: 115 RKDSLKKHNRIFHGG 129
            K  L  H R+ H G
Sbjct: 74  AKYKLVNHIRV-HTG 87

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 25/76 (32%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRC--ELCDKSF 113
           C    K+F  K  L  HIR+ HT  +P                       C    C K F
Sbjct: 65  CPREGKSFKAKYKLVNHIRV-HTGEKP---------------------FPCPFPGCGKIF 102

Query: 114 TRKDSLKKHNRIFHGG 129
            R ++LK H R  H G
Sbjct: 103 ARSENLKIHKRT-HTG 117

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 22/82 (26%), Positives = 28/82 (34%), Gaps = 27/82 (32%)

Query: 55  PCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CD 110
           PC    C K F R ++LK H R  HT  +P                      +CE   CD
Sbjct: 92  PCPFPGCGKIFARSENLKIHKRT-HTGEKP---------------------FKCEFEGCD 129

Query: 111 KSFTRKDSLKKHNRIFHGGADP 132
           + F      KKH  + H     
Sbjct: 130 RRFANSSDRKKHMHV-HTSDKS 150

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 23/71 (32%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           C++ F+R D LK+H R  HT  +P                      +C+ C + F+R D 
Sbjct: 44  CERRFSRSDQLKRHQRR-HTGVKP---------------------FQCKTCQRKFSRSDH 81

Query: 119 LKKHNRIFHGG 129
           LK H R  H G
Sbjct: 82  LKTHTRT-HTG 91

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 24/72 (33%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSF 113
           C  C + F+R D LK H R  HT  +P                       C    C K F
Sbjct: 69  CKTCQRKFSRSDHLKTHTRT-HTGEKP---------------------FSCRWPSCQKKF 106

Query: 114 TRKDSLKKHNRI 125
            R D L +H+ +
Sbjct: 107 ARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 25/73 (34%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSFTRK 116
           C+K + +   L+ H R  HT  +P                      +C+   C++ F+R 
Sbjct: 14  CNKRYFKLSHLQMHSRK-HTGEKP---------------------YQCDFKDCERRFSRS 51

Query: 117 DSLKKHNRIFHGG 129
           D LK+H R  H G
Sbjct: 52  DQLKRHQRR-HTG 63

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 49.8 bits (120), Expect = 5e-09
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 19/77 (24%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C+ CDKTF +K  L  H +         + +           AAF     C  C K+FTR
Sbjct: 18  CSHCDKTFRQKQLLDMHFKR--------YHD------PNFVPAAF----VCSKCGKTFTR 59

Query: 116 KDSLKKHNRIFHGGADP 132
           ++++ +H      G D 
Sbjct: 60  RNTMARHADN-CAGPDG 75

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 48.4 bits (116), Expect = 2e-08
 Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 25/80 (31%)

Query: 55  PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRC--ELCDKS 112
               C K F + + LK H    HTQ  P                       C  E CDK 
Sbjct: 5   HFENCGKAFKKHNQLKVHQFS-HTQQLP---------------------YECPHEGCDKR 42

Query: 113 FTRKDSLKKHNRIFHGGADP 132
           F+    LK+H ++ H G   
Sbjct: 43  FSLPSRLKRHEKV-HAGYPC 61

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 12/69 (17%), Positives = 19/69 (27%), Gaps = 22/69 (31%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           CDK F+    LK+H ++ H     +                     + + C         
Sbjct: 39  CDKRFSLPSRLKRHEKV-HAGYPCK---------------------KDDSCSFVGKTWTL 76

Query: 119 LKKHNRIFH 127
             KH    H
Sbjct: 77  YLKHVAECH 85

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 47.8 bits (115), Expect = 2e-08
 Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C  +F  K +L  H  + HT  +P                      RC +C   F R
Sbjct: 20  CDRCQASFRYKGNLASHKTV-HTGEKP---------------------YRCNICGAQFNR 57

Query: 116 KDSLKKHNRIFHGG 129
             +LK H RI H G
Sbjct: 58  PANLKTHTRI-HSG 70

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 47.7 bits (113), Expect = 4e-08
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 14/75 (18%)

Query: 55  PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT 114
           P   CD+TF+    L  H+ + H     Q+ +V                  C    KSF 
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY-------------WEECPREGKSFK 73

Query: 115 RKDSLKKHNRIFHGG 129
            K  L  H R+ H G
Sbjct: 74  AKYKLVNHIRV-HTG 87

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 24/76 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIF--HTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSF 113
           C  C K + RK++L +H      +   Q                        C +C ++F
Sbjct: 38  CPKCGKCYFRKENLLEHEARNCMNRSEQV---------------------FTCSVCQETF 76

Query: 114 TRKDSLKKHNRIFHGG 129
            R+  L+ H    H G
Sbjct: 77  RRRMELRLHMVS-HTG 91

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 24/75 (32%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C++C +TF R+  L+ H+   HT   P                      +C  C + F +
Sbjct: 69  CSVCQETFRRRMELRLHMVS-HTGEMP---------------------YKCSSCSQQFMQ 106

Query: 116 KDSLKKH-NRIFHGG 129
           K  L+ H  ++ H G
Sbjct: 107 KKDLQSHMIKL-HSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 22/69 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K F  K  LK H R  HT  +P                       C  C K + R
Sbjct: 10  CPTCHKKFLSKYYLKVHNRK-HTGEKP---------------------FECPKCGKCYFR 47

Query: 116 KDSLKKHNR 124
           K++L +H  
Sbjct: 48  KENLLEHEA 56

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 47.1 bits (113), Expect = 6e-08
 Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 23/78 (29%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C K F     L +H    H+  +P                       C +C   F R
Sbjct: 10  CEICGKIFRDVYHLNRHKLS-HSGEKP---------------------YSCPVCGLRFKR 47

Query: 116 KDSLKKHNRIFHGGADPK 133
           KD +  H R  H G+  K
Sbjct: 48  KDRMSYHVRS-HDGSVGK 64

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 24/76 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHT--QNQPQHTNVIEVALGARANAAFIDRIRCELCDKSF 113
           C +C   F RKD +  H+R  H     +P                       C+ C K F
Sbjct: 38  CPVCGLRFKRKDRMSYHVRS-HDGSVGKP---------------------YICQSCGKGF 75

Query: 114 TRKDSLKKHNRIFHGG 129
           +R D L  H +  H G
Sbjct: 76  SRPDHLNGHIKQVHSG 91

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.1 bits (108), Expect = 3e-07
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C K+F R  +L  H+ I H+  +P                       C+ C K F +
Sbjct: 4   CKICGKSFKRSSTLSTHLLI-HSDTRP---------------------YPCQYCGKRFHQ 41

Query: 116 KDSLKKHNRIFHGG 129
           K  +KKH  I H G
Sbjct: 42  KSDMKKHTFI-HTG 54

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 43.2 bits (103), Expect = 1e-06
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K F +K  +KKH  I HT  +P                      +C++C K+F++
Sbjct: 32  CQYCGKRFHQKSDMKKHTFI-HTGEKP---------------------HKCQVCGKAFSQ 69

Query: 116 KDSLKKHNRIFHGG 129
             +L  H+R  H G
Sbjct: 70  SSNLITHSRK-HTG 82

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 19/72 (26%), Positives = 25/72 (34%), Gaps = 24/72 (33%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRK 116
           C+K FT    L +H    HT  +                        C+   CD  FT K
Sbjct: 50  CEKGFTSLHHLTRHSLT-HTGEKN---------------------FTCDSDGCDLRFTTK 87

Query: 117 DSLKKHNRIFHG 128
            ++KKH   FH 
Sbjct: 88  ANMKKHFNRFHN 99

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.4 bits (111), Expect = 6e-07
 Identities = 21/76 (27%), Positives = 27/76 (35%), Gaps = 25/76 (32%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRC--ELCDKSFTRK 116
           C K F + + LK H    HTQ  P                       C  E CDK F+  
Sbjct: 112 CGKAFKKHNQLKVHQFS-HTQQLP---------------------YECPHEGCDKRFSLP 149

Query: 117 DSLKKHNRIFHGGADP 132
             LK+H ++ H G   
Sbjct: 150 SRLKRHEKV-HAGYPC 164

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 23/73 (31%)

Query: 59  CDKTFTRKDSLKKHIRIFHT--QNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRK 116
           CD  FT K ++KKH        +      +                      C K+F + 
Sbjct: 80  CDLRFTTKANMKKHFNR-FHNIKICVYVCHFEN-------------------CGKAFKKH 119

Query: 117 DSLKKHNRIFHGG 129
           + LK H    H  
Sbjct: 120 NQLKVHQFS-HTQ 131

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 25/73 (34%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRK 116
           C   + +   L+ H+   HT  +P                       C+   C+K FT  
Sbjct: 20  CGAAYNKNWKLQAHLCK-HTGEKP---------------------FPCKEEGCEKGFTSL 57

Query: 117 DSLKKHNRIFHGG 129
             L +H+   H G
Sbjct: 58  HHLTRHSLT-HTG 69

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 12/69 (17%), Positives = 19/69 (27%), Gaps = 22/69 (31%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           CDK F+    LK+H ++ H     +                     + + C         
Sbjct: 142 CDKRFSLPSRLKRHEKV-HAGYPCK---------------------KDDSCSFVGKTWTL 179

Query: 119 LKKHNRIFH 127
             KH    H
Sbjct: 180 YLKHVAECH 188

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 43.6 bits (104), Expect = 9e-07
 Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 23/77 (29%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K F+R   L +H R+ HT  +P                      +C  C K+F++
Sbjct: 17  CVECGKAFSRSSILVQHQRV-HTGEKP---------------------YKCLECGKAFSQ 54

Query: 116 KDSLKKHNRIFHGGADP 132
              L  H RI H     
Sbjct: 55  NSGLINHQRI-HTSGPS 70

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C + FT+  +L  H R  HT  +P                       C++C K+F R
Sbjct: 20  CKFCGRHFTKSYNLLIHERT-HTDERP---------------------YTCDICHKAFRR 57

Query: 116 KDSLKKHNRIFHGG 129
           +D L+ H  I H  
Sbjct: 58  QDHLRDHRYI-HSK 70

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C K F R+D L+ H  I H++ +P                      +C+ C K F +
Sbjct: 48  CDICHKAFRRQDHLRDHRYI-HSKEKP---------------------FKCQECGKGFCQ 85

Query: 116 KDSLKKHNRIFHGG 129
             +L  H  + H  
Sbjct: 86  SRTLAVHKTL-HMQ 98

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K+F+R+D+L  H R  HT  +P                      +C  C KSF+R
Sbjct: 136 CPECGKSFSREDNLHTHQRT-HTGEKP---------------------YKCPECGKSFSR 173

Query: 116 KDSLKKHNRIFHGG 129
           +D+L  H R  H G
Sbjct: 174 RDALNVHQRT-HTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K+F+R D L +H R  HT  +P                      +C  C KSF+ 
Sbjct: 24  CPECGKSFSRSDHLAEHQRT-HTGEKP---------------------YKCPECGKSFSD 61

Query: 116 KDSLKKHNRIFHGG 129
           K  L +H R  H G
Sbjct: 62  KKDLTRHQRT-HTG 74

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K+F++   L+ H R  HT  +P                      +C  C KSF+R
Sbjct: 108 CPECGKSFSQLAHLRAHQRT-HTGEKP---------------------YKCPECGKSFSR 145

Query: 116 KDSLKKHNRIFHGG 129
           +D+L  H R  H G
Sbjct: 146 EDNLHTHQRT-HTG 158

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.6 bits (104), Expect = 5e-06
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K+F+ K  L +H R  HT  +P                      +C  C KSF++
Sbjct: 52  CPECGKSFSDKKDLTRHQRT-HTGEKP---------------------YKCPECGKSFSQ 89

Query: 116 KDSLKKHNRIFHGG 129
           + +L+ H R  H G
Sbjct: 90  RANLRAHQRT-HTG 102

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.4 bits (101), Expect = 1e-05
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 23/74 (31%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K+F+++ +L+ H R  HT  +P                       C  C KSF++
Sbjct: 80  CPECGKSFSQRANLRAHQRT-HTGEKP---------------------YACPECGKSFSQ 117

Query: 116 KDSLKKHNRIFHGG 129
              L+ H R  H G
Sbjct: 118 LAHLRAHQRT-HTG 130

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 21/74 (28%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K F     LK+H  + HT  +P                          C K F+ 
Sbjct: 37  CAECGKAFVESSKLKRHQLV-HTGEKPFQCTFEG-------------------CGKRFSL 76

Query: 116 KDSLKKHNRIFHGG 129
             +L+ H RI H G
Sbjct: 77  DFNLRTHVRI-HTG 89

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 27/81 (33%)

Query: 56  CTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDK 111
           CT   C K F+   +L+ H+RI HT ++P                       C    C+K
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRI-HTGDRP---------------------YVCPFDGCNK 102

Query: 112 SFTRKDSLKKHNRIFHGGADP 132
            F +  +LK H    H  A  
Sbjct: 103 KFAQSTNLKSHILT-HAKAKN 122

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 24/71 (33%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           C K F    +++KH+   H   +  H                     C  C K+F     
Sbjct: 13  CTKMFRDNSAMRKHLHT-HGP-RV-HV--------------------CAECGKAFVESSK 49

Query: 119 LKKHNRIFHGG 129
           LK+H  + H G
Sbjct: 50  LKRHQLV-HTG 59

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 23/72 (31%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSFTRK 116
           C K F+      KH    H+  +P                       C+L  C K +T  
Sbjct: 105 CSKAFSNASDRAKHQNRTHSNEKP---------------------YVCKLPGCTKRYTDP 143

Query: 117 DSLKKHNRIFHG 128
            SL+KH +  HG
Sbjct: 144 SSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 25/76 (32%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRC--ELCDKSF 113
           C+   + F  +  L  H+R  HT  +P                      +C  E C KS+
Sbjct: 42  CSRELRPFKAQYMLVVHMRR-HTGEKP---------------------HKCTFEGCRKSY 79

Query: 114 TRKDSLKKHNRIFHGG 129
           +R ++LK H R  H G
Sbjct: 80  SRLENLKTHLRS-HTG 94

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 42.6 bits (101), Expect = 9e-06
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 25/70 (35%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRK 116
           C K+++R ++LK H+R  HT  +P                       CE   C K+F+  
Sbjct: 75  CRKSYSRLENLKTHLRS-HTGEKP---------------------YMCEHEGCSKAFSNA 112

Query: 117 DSLKKH-NRI 125
               KH NR 
Sbjct: 113 SDRAKHQNRT 122

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 42.0 bits (99), Expect = 3e-06
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 20/67 (29%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           C KT+ +   LK H R  HT  +P   +                    + C++ F R D 
Sbjct: 25  CGKTYFKSSHLKAHTRT-HTGEKPFSCSW-------------------KGCERRFARSDE 64

Query: 119 LKKHNRI 125
           L +H R 
Sbjct: 65  LSRHRRT 71

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.0 bits (100), Expect = 7e-06
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 23/74 (31%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           C K+FT K    +H+ + H   +P                       C +C K F  K  
Sbjct: 15  CGKSFTHKSQRDRHMSM-HLGLRP---------------------YGCGVCGKKFKMKHH 52

Query: 119 LKKHNRIFHGGADP 132
           L  H +I H G  P
Sbjct: 53  LVGHMKI-HTGIKP 65

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 40.1 bits (95), Expect = 3e-05
 Identities = 18/77 (23%), Positives = 25/77 (32%), Gaps = 25/77 (32%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C +C K F  K  L  H++I HT  +P                       C +C K F  
Sbjct: 40  CGVCGKKFKMKHHLVGHMKI-HTGIKP---------------------YECNICAKRFMW 77

Query: 116 KDSLKKHNRIFHGGADP 132
           +DS   H  +       
Sbjct: 78  RDSF--HRHV-TSCTKS 91

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.9 bits (97), Expect = 9e-06
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 23/77 (29%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C K+F+    L KH R  HT  +P                      +C+ C K+F +
Sbjct: 21  CDECGKSFSHSSDLSKHRRT-HTGEKP---------------------YKCDECGKAFIQ 58

Query: 116 KDSLKKHNRIFHGGADP 132
           +  L  H+R+ H G+ P
Sbjct: 59  RSHLIGHHRV-HTGSGP 74

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)

Query: 55 PCTLCDKTFTRKDSLKKHIRIFHT 78
          PC +C   F    +LK H+RI HT
Sbjct: 13 PCEICGTRFRHLQTLKSHLRI-HT 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHGG 129
            CE+C   F    +LK H RI H G
Sbjct: 13  PCEICGTRFRHLQTLKSHLRI-HTG 36

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 19/75 (25%), Positives = 22/75 (29%), Gaps = 24/75 (32%)

Query: 55  PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT 114
            C LC   F+   SLK+HIR                               C +C K FT
Sbjct: 76  VCPLCLMPFSSSVSLKQHIRYTE------------------------HTKVCPVCKKEFT 111

Query: 115 RKDSLKKHNRIFHGG 129
             DS   H    H  
Sbjct: 112 STDSALDHVCKKHNI 126

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 36.6 bits (84), Expect = 3e-04
 Identities = 19/73 (26%), Positives = 24/73 (32%), Gaps = 22/73 (30%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 115
           C  C     +   LKKHIR  HT  +P                       C  C+ SF  
Sbjct: 4   CEECGIRXKKPSMLKKHIRT-HTDVRP---------------------YHCTYCNFSFKT 41

Query: 116 KDSLKKHNRIFHG 128
           K +L KH +    
Sbjct: 42  KGNLTKHMKSKAH 54

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 35.7 bits (83), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHTQNQP 82
          C  C K+FT++ SL  H R   +Q+ P
Sbjct: 14 CGQCGKSFTQRGSLAVHQRS-CSQSGP 39

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 37.4 bits (86), Expect = 4e-04
 Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 11/78 (14%)

Query: 56  CTLCDKTFTRKDSLKKHIRIF-HTQNQPQHTNVIEVALGARANAAFIDR----------I 104
           C  C   +     L  H+    H ++    T+       ++     +            +
Sbjct: 22  CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL 81

Query: 105 RCELCDKSFTRKDSLKKH 122
           +C  C  SF     L  H
Sbjct: 82  KCMYCGHSFESLQDLSVH 99

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 21/59 (35%)

Query: 56  CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT 114
           C  C K F+R D L  HI+  HT  +P                      +C++     +
Sbjct: 15  CQSCGKGFSRPDHLNGHIKQVHTSERP---------------------HKCQVWVSGPS 52

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.9 bits (81), Expect = 7e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 1/27 (3%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHTQNQP 82
          C  C   F+   SL KH+R  H +  P
Sbjct: 15 CKECGMNFSWSCSLFKHLRS-HERTDP 40

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHGGADP 132
           +C  CD  F++  SL+ H  + H G  P
Sbjct: 14  KCRECDMCFSQASSLRLHQNV-HVGEKP 40

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	167
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.88
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.88
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.85
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.85
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.84
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.84
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.84
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.84
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.83
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.83
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.82
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.82
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.81
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.78
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.73
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.73
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.7
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.68
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.67
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.67
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.67
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.66
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.65
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.65
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.64
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.64
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.64
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.64
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.64
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.63
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.63
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.63
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.62
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.6
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.58
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.57
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.56
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.56
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.54
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.52
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.52
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.51
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.51
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.5
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.5
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.48
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.47
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.47
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.45
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.45
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.44
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.43
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.43
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.43
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.42
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.42
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.41
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.41
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.39
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.35
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.33
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.32
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.31
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.29
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.29
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.28
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.28
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.26
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.26
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.23
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.23
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.22
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.21
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.21
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.17
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.1
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.03
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.02
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.02
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.02
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.02
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.01
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.01
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.01
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.01
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.01
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.98
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.97
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.96
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.92
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.91
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.89
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.88
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.82
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.79
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.78
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.76
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.73
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.73
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.7
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.69
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.62
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.6
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.59
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.59
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.58
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.57
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.55
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.55
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.55
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.53
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.53
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.53
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.53
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.52
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.51
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.51
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.5
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.5
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.5
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.5
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.5
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.49
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.48
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.48
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.47
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.47
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.46
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.46
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.83
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.45
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.45
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.44
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.81
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.43
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.8
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.41
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.78
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.4
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.4
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.39
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.72
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.36
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.36
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.34
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.33
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.32
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.66
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.19
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.13
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.12
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.84
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.76
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.18
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.9
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.16
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.14
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.99
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.69
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.93
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.87
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.42
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	92.85
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	92.43
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	92.41
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	91.33
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.08
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.74
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.58
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	89.87
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	87.9
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	87.8
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	86.06
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	86.02
1yk4_A	52	Rubredoxin, RD; electron transport; 0.69A {Pyrococ	85.8
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	85.55
2kn9_A	81	Rubredoxin; metalloprotein, ssgcid, structural gen	85.37
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	85.28
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	85.03
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	84.76
4rxn_A	54	Rubredoxin; electron transfer(iron-sulfur protein)	84.74
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.22
2v3b_B	55	Rubredoxin 2, rubredoxin; alkane degradation, iron	84.07
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	83.97
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	83.97
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	83.76
1e8j_A	52	Rubredoxin; iron-sulfur-protein, zinc-substitution	82.06
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	81.76
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	81.74
1s24_A	87	Rubredoxin 2; electron transport; NMR {Pseudomonas	81.72
1vq8_Z	83	50S ribosomal protein L37AE; ribosome 50S, protein	81.29
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	80.33

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=6e-25  Score=141.27  Aligned_cols=107  Identities=20%  Similarity=0.191  Sum_probs=95.3

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccc----------cCceecccccccccChhH
Q psy8167          49 VPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAF----------IDRIRCELCDKSFTRKDS  118 (167)
Q Consensus        49 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l----------~k~~~C~~C~k~f~~~~~  118 (167)
                      .++++|.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....+..          .++|.|.+|++.|.....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHH-HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHH-HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            3457899999999999999999999 77999999999999999987332211          567999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         119 LKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       119 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      |..|+++|+++++|.|.+|++.|.....|..|++..|.
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            99999999999999999999999999999999985443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.91  E-value=8.1e-25  Score=150.67  Aligned_cols=111  Identities=25%  Similarity=0.353  Sum_probs=59.9

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccc--------------------------cccc-
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARA--------------------------NAAF-  100 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~--------------------------~~~l-  100 (167)
                      +.++++|.|..|++.|.....|..|+ ..|.++++|.|..|++.|....                          ...| 
T Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  122 (190)
T 2i13_A           44 HTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR  122 (190)
T ss_dssp             C---CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHH
T ss_pred             cCCCCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHH
Confidence            33445555555555555555555555 4455555555555555554411                          1111 


Q ss_pred             --------cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         101 --------IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       101 --------~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                              .++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++.|++++|
T Consensus       123 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             HHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence                    45566666666666666666666666666666666666666666666666666666554

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=1.5e-24  Score=141.26  Aligned_cols=94  Identities=17%  Similarity=0.274  Sum_probs=82.6

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHh
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      .++.|+++|.|.+|++.|.....|..|+ .+|.++++                     |.|.+||+.|.....|..|+++
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~-~~H~~~k~---------------------~~C~~C~k~F~~~~~L~~H~~~   72 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHF-NIHSWEKK---------------------YPCRYCEKVFPLAEYRTKHEIH   72 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHH-HHHHCCSC---------------------EECSSSSCEESSHHHHHHHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHH-HHcCCCCC---------------------eeCCccCeecccccchhhhccc
Confidence            4567889999999999999999999999 77988776                     6788888889999999999999


Q ss_pred             hcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         126 FHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       126 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      |.++++|.|.+|++.|.....|..|++.|++++|..
T Consensus        73 H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~  108 (133)
T 2lt7_A           73 HTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSG  108 (133)
T ss_dssp             HHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTS
T ss_pred             cCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCC
Confidence            888889999999999999999999999888777643

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=5.2e-24  Score=135.97  Aligned_cols=105  Identities=22%  Similarity=0.325  Sum_probs=94.9

Q ss_pred             CCCCcccccc--cccccCCHHHHHHHHHHhcCCCCccccc--chhhhhhccccccc-------cCceecccccccccChh
Q psy8167          49 VPIDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTN--VIEVALGARANAAF-------IDRIRCELCDKSFTRKD  117 (167)
Q Consensus        49 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~--~c~~~~~~~~~~~l-------~k~~~C~~C~k~f~~~~  117 (167)
                      .++++|.|.+  |++.|.....|..|+ ..|.++++|.|.  .|++.|.....+..       .++|.|.+|++.|....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHH-HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            3567899997  999999999999999 679999999999  79999988333222       67899999999999999


Q ss_pred             HHHHHHHhhcCCCCCCC--CchhhhcCCHHHHHHHHhhc
Q psy8167         118 SLKKHNRIFHGGADPKL--MDEQMARGSADFLEVVLNED  154 (167)
Q Consensus       118 ~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  154 (167)
                      .|..|+++|+++++|.|  +.|++.|.....|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  89999999999999999876

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=2.8e-23  Score=138.55  Aligned_cols=114  Identities=18%  Similarity=0.197  Sum_probs=100.4

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHHhcCCCCc--------ccccchhhhhhccccccc-------cCceeccc--ccc
Q psy8167          49 VPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQP--------QHTNVIEVALGARANAAF-------IDRIRCEL--CDK  111 (167)
Q Consensus        49 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~--------~~c~~c~~~~~~~~~~~l-------~k~~~C~~--C~k  111 (167)
                      .....|.|..|++.|.....|..|++..|.+..+        |.|..|++.|.....+..       .++|.|.+  |++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            3457799999999999999999999555888765        899999999988332222       68899998  999


Q ss_pred             cccChhHHHHHHHhhcCCCCCCCCc--hhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         112 SFTRKDSLKKHNRIFHGGADPKLMD--EQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       112 ~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .|.....|..|+++|+++++|.|.+  |++.|.....|..|++.|++++|...
T Consensus       101 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A          101 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             EESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             ccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            9999999999999999999999997  99999999999999999999988654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.89  E-value=7.9e-24  Score=145.70  Aligned_cols=113  Identities=19%  Similarity=0.301  Sum_probs=63.8

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccc-------cCceecccccccccChhHH
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAF-------IDRIRCELCDKSFTRKDSL  119 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l-------~k~~~C~~C~k~f~~~~~l  119 (167)
                      .+.++++|.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....+..       .++|.|.+|++.|.....|
T Consensus        15 ~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   93 (190)
T 2i13_A           15 LEPGEKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANL   93 (190)
T ss_dssp             ----------------CCSSHHHHHGG-GCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             hcCCCCCCcCCCCccccCCHHHHHHHH-HHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHH
Confidence            455678899999999999999999999 78999999999999999988332222       4556666666666666666


Q ss_pred             HHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         120 KKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       120 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      ..|+++|+++++|.|.+|++.|.....|..|++.|++++|.
T Consensus        94 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  134 (190)
T 2i13_A           94 RAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPY  134 (190)
T ss_dssp             HHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             HHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCe
Confidence            66666665555566665555555555555555555554443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=1.4e-23  Score=134.97  Aligned_cols=108  Identities=18%  Similarity=0.247  Sum_probs=91.7

Q ss_pred             CCccccc--ccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccc-------cCceeccc--ccccccChhHH
Q psy8167          51 IDRIPCT--LCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAF-------IDRIRCEL--CDKSFTRKDSL  119 (167)
Q Consensus        51 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l-------~k~~~C~~--C~k~f~~~~~l  119 (167)
                      +++|.|+  .|++.|.....|..|+ ..| +.++|.|..|++.|.....+..       .++|.|..  |++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHL-HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHH-GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHH-HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            4679999  8999999999999999 778 8889999999999988332222       67899986  99999999999


Q ss_pred             HHHHHhhcCCCCCCCC--chhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         120 KKHNRIFHGGADPKLM--DEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       120 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      ..|+++|+++++|.|.  .|++.|.+...|..|+++|+++++.
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            9999999999999996  5999999999999999999987753

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.88  E-value=2.5e-22  Score=125.72  Aligned_cols=93  Identities=23%  Similarity=0.356  Sum_probs=84.8

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhc
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      ...+++|.|..|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|+++|+
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~   69 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERP---------------------YTCDICHKAFRRQDHLRDHRYIHS   69 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHH-HHHCCSCC---------------------CBCSSSCCBCSCHHHHHHHGGGSC
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHH-HHcCCCCC---------------------cCCCCccchhCCHHHHHHHHHHhC
Confidence            34567899999999999999999999 66877665                     688999999999999999999999


Q ss_pred             CCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         128 GGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       128 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      ++++|.|.+|++.|.....|..|++.|++++|...
T Consensus        70 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           70 KEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            99999999999999999999999999999888754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.9e-22  Score=124.11  Aligned_cols=92  Identities=30%  Similarity=0.405  Sum_probs=84.0

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhc
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      ..++++|.|..|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|+++|+
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~   60 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKP---------------------YKCKTCDYAAADSSSLNKHLRIHS   60 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHG-GGCCCCCS---------------------EECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHH-HhcCCCCC---------------------EeCCCCCCccCCHHHHHHHHHHhC
Confidence            34568899999999999999999999 77877665                     789999999999999999999999


Q ss_pred             CCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         128 GGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       128 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      ++++|.|.+|++.|.....|..|++.|+++.+.+
T Consensus        61 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           61 DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS   94 (96)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHTTCCSCCCCC
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999999999999877654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.85  E-value=1.1e-21  Score=119.17  Aligned_cols=86  Identities=24%  Similarity=0.391  Sum_probs=77.7

Q ss_pred             CCccccc--ccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcC
Q psy8167          51 IDRIPCT--LCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus        51 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +++|.|.  .|++.|.....|..|+ ..|.+.++                     |.|..|++.|.....|..|+++|++
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~   59 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKP---------------------FQCRICMRNFSRSDHLTTHIRTHTG   59 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCC---------------------EECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHH-HHhCCCCC---------------------ccCCCCCcccCCHHHHHHHHHHcCC
Confidence            5789998  6999999999999999 66877655                     7899999999999999999999999


Q ss_pred             CCCCCCCchhhhcCCHHHHHHHHhhcCCCC
Q psy8167         129 GADPKLMDEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       129 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      +++|.|.+|++.|.....|..|++.|++++
T Consensus        60 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           60 EKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            999999999999999999999999998765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.85  E-value=7.8e-22  Score=135.70  Aligned_cols=109  Identities=20%  Similarity=0.238  Sum_probs=89.0

Q ss_pred             ccCCCCcccc--cccccccCCHHHHHHHHHHhcCCCCccccc--chhhhhhccccccc---------cCceec--ccccc
Q psy8167          47 PVVPIDRIPC--TLCDKTFTRKDSLKKHIRIFHTQNQPQHTN--VIEVALGARANAAF---------IDRIRC--ELCDK  111 (167)
Q Consensus        47 ~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~--~c~~~~~~~~~~~l---------~k~~~C--~~C~k  111 (167)
                      .+.++++|.|  ..|++.|.....|..|+ ..|.++++|.|.  .|++.|.....+..         .++|.|  ..||+
T Consensus        36 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k  114 (190)
T 1tf6_A           36 KHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGK  114 (190)
T ss_dssp             HHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCE
T ss_pred             hcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCcc
Confidence            3456678888  78999999888898898 778888888888  88888876332211         456888  88999


Q ss_pred             cccChhHHHHHHHhhcCCCCCCCCc--hhhhcCCHHHHHHHHhhcCC
Q psy8167         112 SFTRKDSLKKHNRIFHGGADPKLMD--EQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       112 ~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  156 (167)
                      .|.....|..|+++|+++++|.|.+  |++.|.....|..|++.|++
T Consensus       115 ~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          115 AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             ECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             ccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            9999999999999988888999977  99999999999999988876

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.84  E-value=2.7e-21  Score=115.40  Aligned_cols=82  Identities=27%  Similarity=0.512  Sum_probs=75.7

Q ss_pred             cccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcCCCCC
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADP  132 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~  132 (167)
                      +|.|..|++.|.....|..|+ ..|.++++                     |.|..|++.|.....|..|++.|+++++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   58 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSDTRP---------------------YPCQYCGKRFHQKSDMKKHTFIHTGEKPH   58 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHTCCC---------------------EECSSSCCEESSHHHHHHHHHHHHTCCCE
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCCCCC---------------------eeCCcCChhhCCHHHHHHHHHHhcCCCCC
Confidence            589999999999999999999 66876655                     78999999999999999999999999999


Q ss_pred             CCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         133 KLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       133 ~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      .|..|++.|.....|..|++.|++
T Consensus        59 ~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           59 KCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             ECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             cCCCcchhhCChHHHHHHHHhhCC
Confidence            999999999999999999999864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=6.4e-21  Score=119.58  Aligned_cols=93  Identities=12%  Similarity=0.111  Sum_probs=81.9

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHH
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNR  124 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~  124 (167)
                      ...+.++++|.|..|++.|.....|..|+ ..|.  +                     +|.|.+|++.|.....|..|++
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~--~---------------------~~~C~~C~~~f~~~~~l~~H~~   63 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHE-RLCR--N---------------------AAVCPYCSLRFFSPELKQEHES   63 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHH-HHHH--H---------------------SBCCTTTCCCBSSHHHHHHHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHH-HHCC--C---------------------CccCCCCCCccCCHHHHHHHHH
Confidence            34567789999999999999999999999 5572  2                     3789999999999999999996


Q ss_pred             hhcCCCCCCCCchhhhcCCHHHHHHHHh-hcCCCCCccc
Q psy8167         125 IFHGGADPKLMDEQMARGSADFLEVVLN-EDGEGEPVSI  162 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~~  162 (167)
                       |.++++|.|.+|++.|.....|..|++ .|.+++|...
T Consensus        64 -H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           64 -KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             -HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             -cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence             999999999999999999999999998 7888776543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=1.9e-21  Score=129.46  Aligned_cols=108  Identities=16%  Similarity=0.129  Sum_probs=81.8

Q ss_pred             cCCCCcccccc-----cccccCCHHHHHHHHHHhcCCCCcccccc--hhhhhhccccccc-------cCceeccc--ccc
Q psy8167          48 VVPIDRIPCTL-----CDKTFTRKDSLKKHIRIFHTQNQPQHTNV--IEVALGARANAAF-------IDRIRCEL--CDK  111 (167)
Q Consensus        48 ~~~~~~~~C~~-----C~~~f~~~~~l~~H~~~~h~~~~~~~c~~--c~~~~~~~~~~~l-------~k~~~C~~--C~k  111 (167)
                      +.++++|.|.+     |++.|.....|..|+ ..|.++++|.|..  |++.|.....+..       .++|.|.+  |++
T Consensus        29 h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  107 (155)
T 2gli_A           29 HGERKEFVCHWGGCSRELRPFKAQYMLVVHM-RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK  107 (155)
T ss_dssp             SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHT-HHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCC
T ss_pred             CCCCcceeCCCCCccchhhhhhhHHHHHHHH-HhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCC
Confidence            34456677664     348888888888888 6688888888874  8888877322222       56788887  888


Q ss_pred             cccChhHHHHHH-HhhcCCCCCCCCc--hhhhcCCHHHHHHHHhhcCC
Q psy8167         112 SFTRKDSLKKHN-RIFHGGADPKLMD--EQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       112 ~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  156 (167)
                      .|.....|..|+ ++|.++++|.|.+  |++.|.....|..|++.|++
T Consensus       108 ~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             EESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            888888888887 7788888888887  88888888888888888764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=1.7e-20  Score=115.07  Aligned_cols=86  Identities=22%  Similarity=0.397  Sum_probs=77.7

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcC
Q psy8167          49 VPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus        49 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      .++++|.|..|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|++.|++
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~   60 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHK-LSHSGEKP---------------------YSCPVCGLRFKRKDRMSYHVRSHDG   60 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHH-HHSCSSCS---------------------EECSSSCCEESCHHHHHHHHHHHCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHH-HhcCCCCC---------------------CcCCCCCCccCCHHHHHHHHHHhcC
Confidence            3567899999999999999999999 67877665                     7899999999999999999999998


Q ss_pred             C--CCCCCCchhhhcCCHHHHHHHHh-hcCC
Q psy8167         129 G--ADPKLMDEQMARGSADFLEVVLN-EDGE  156 (167)
Q Consensus       129 ~--~~~~C~~C~~~f~~~~~l~~H~~-~~~~  156 (167)
                      +  ++|.|.+|++.|.....|..|++ .|.+
T Consensus        61 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           61 SVGKPYICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             CCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             CCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence            7  89999999999999999999997 5544

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.83  E-value=7.3e-21  Score=119.80  Aligned_cols=87  Identities=23%  Similarity=0.296  Sum_probs=79.7

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhh
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      .+.++++|.| .|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|+++|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h   60 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHM-SMHLGLRP---------------------YGCGVCGKKFKMKHHLVGHMKIH   60 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHH-HHHSCCCS---------------------EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHH-HHcCCCcC---------------------ccCCCCCcccCCHHHHHHHHHHc
Confidence            4677899999 9999999999999999 66877665                     78999999999999999999999


Q ss_pred             cCCCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         127 HGGADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       127 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      +++++|.|.+|++.|.....|..|++.|+.
T Consensus        61 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           61 TGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             CCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            999999999999999999999999997763

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.83  E-value=5.3e-21  Score=107.32  Aligned_cols=58  Identities=14%  Similarity=0.186  Sum_probs=55.1

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      +|+|.|.+||+.|...+.|..|+++|.+++||.|.+||+.|.....|.+|+++|.++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            5789999999999999999999999999999999999999999999999999998764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.82  E-value=1.3e-20  Score=129.54  Aligned_cols=114  Identities=21%  Similarity=0.226  Sum_probs=97.5

Q ss_pred             cCCCCcccc--cccccccCCHHHHHHHHHHhcCCCCcccc--cchhhhhhccccccc-------cCceecc--ccccccc
Q psy8167          48 VVPIDRIPC--TLCDKTFTRKDSLKKHIRIFHTQNQPQHT--NVIEVALGARANAAF-------IDRIRCE--LCDKSFT  114 (167)
Q Consensus        48 ~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~c--~~c~~~~~~~~~~~l-------~k~~~C~--~C~k~f~  114 (167)
                      +...++|.|  ..|++.|.....|..|+ ..|.++++|.|  ..|++.|.....+..       .++|.|.  .|++.|.
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   85 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFT   85 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEES
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccC
Confidence            345678999  68999999999999999 77999999999  899999988332222       6789999  8999999


Q ss_pred             ChhHHHHHH-Hhh-cCCCCCCC--CchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         115 RKDSLKKHN-RIF-HGGADPKL--MDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       115 ~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      ....|..|+ +.| .++++|.|  ..|++.|.....|..|++.|++++|...
T Consensus        86 ~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C  137 (190)
T 1tf6_A           86 TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC  137 (190)
T ss_dssp             CHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBC
T ss_pred             CHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccC
Confidence            999999999 555 35789999  8899999999999999999999888654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=1.2e-20  Score=119.77  Aligned_cols=95  Identities=17%  Similarity=0.084  Sum_probs=81.0

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHh--cCCCCcccccchhhhhhccccccccCceecccccccc--cChhHHH
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIF--HTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSF--TRKDSLK  120 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~--h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f--~~~~~l~  120 (167)
                      ...+.++++|.|..|++.|.....|..|+ ..  |.+.+++                    +.|.+|++.|  .....|.
T Consensus        11 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~~~h~~~~~~--------------------~~C~~C~~~f~f~~~~~l~   69 (115)
T 2dmi_A           11 GSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNH--------------------ETDNNNPKRWSKPRKRSLL   69 (115)
T ss_dssp             CCCCCCCCSEEBSSSSCEESSHHHHHHHH-HHTCCCBCSCC--------------------CCCCCCCSCCSSCCCCCCC
T ss_pred             eeeeCCCCCEECCccCchhcCHHHHHHHH-HHhCccccCCC--------------------ccCCCCCcccccccHHHHH
Confidence            34577789999999999999999999999 55  4433331                    4589999988  8999999


Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      .|+++|.++++|.|.+|++.|.....|..|++.|+.....
T Consensus        70 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             CCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCS
T ss_pred             HHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccC
Confidence            9999999999999999999999999999999988755443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.1e-20  Score=125.77  Aligned_cols=112  Identities=18%  Similarity=0.188  Sum_probs=95.4

Q ss_pred             CCcccccccccccCCHHHHHHHHHH--hcCCCCcccccch-----hhhhhccccccc-------cCceeccc--cccccc
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRI--FHTQNQPQHTNVI-----EVALGARANAAF-------IDRIRCEL--CDKSFT  114 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~--~h~~~~~~~c~~c-----~~~~~~~~~~~l-------~k~~~C~~--C~k~f~  114 (167)
                      |.++.|..|++.|.....|..|++.  .|.++++|.|..|     ++.|.....+..       .++|.|.+  |++.|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            3568999999999999999999953  6888899998754     377877322222       67899985  999999


Q ss_pred             ChhHHHHHHHhhcCCCCCCCCc--hhhhcCCHHHHHHHH-hhcCCCCCccc
Q psy8167         115 RKDSLKKHNRIFHGGADPKLMD--EQMARGSADFLEVVL-NEDGEGEPVSI  162 (167)
Q Consensus       115 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~  162 (167)
                      ....|..|+++|+++++|.|.+  |++.|.....|..|+ +.|.+++|...
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  131 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVC  131 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEEC
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeC
Confidence            9999999999999999999999  999999999999999 78888877543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.81  E-value=1.8e-19  Score=111.37  Aligned_cols=86  Identities=26%  Similarity=0.422  Sum_probs=77.6

Q ss_pred             CCCCcccccc--cccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecc--cccccccChhHHHHHHH
Q psy8167          49 VPIDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRKDSLKKHNR  124 (167)
Q Consensus        49 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~--~C~k~f~~~~~l~~H~~  124 (167)
                      ...++|.|..  |++.|.....|..|+ ..|.++++                     |.|.  .|++.|.....|..|++
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~~~C~~~f~~~~~l~~H~~   68 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKP---------------------YKCTWEGCDWRFARSDELTRHYR   68 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHH-HHHSCCCC---------------------EECCSSSCCCEESSHHHHHHHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHH-HHhCCCCC---------------------eeCCCCCCCCccCCHHHHHHHHH
Confidence            3457899997  999999999999999 67877766                     6775  69999999999999999


Q ss_pred             hhcCCCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         125 IFHGGADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      +|+++++|.|.+|++.|.....|..|++.|.+
T Consensus        69 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           69 KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            99999999999999999999999999999863

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.78  E-value=4.4e-19  Score=107.33  Aligned_cols=82  Identities=28%  Similarity=0.500  Sum_probs=75.7

Q ss_pred             CCcccccc--cccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecc--cccccccChhHHHHHHHhh
Q psy8167          51 IDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus        51 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~--~C~k~f~~~~~l~~H~~~h  126 (167)
                      ..+|.|..  |++.|.....|..|+ ..|.++++                     |.|.  .|++.|.....|..|+++|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~~~C~~~f~~~~~l~~H~~~h   60 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKP---------------------YHCDWDGCGWKFARSDELTRHYRKH   60 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHH-TTSCSSCC---------------------EECCSTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCC---------------------cCCCCCCCCCccCCHHHHHHHHHHc
Confidence            36799999  999999999999999 77887766                     6786  5999999999999999999


Q ss_pred             cCCCCCCCCchhhhcCCHHHHHHHHhhc
Q psy8167         127 HGGADPKLMDEQMARGSADFLEVVLNED  154 (167)
Q Consensus       127 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~  154 (167)
                      +++++|.|.+|++.|.....|..|++.|
T Consensus        61 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           61 TGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             HCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            9999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.76  E-value=8e-20  Score=110.63  Aligned_cols=82  Identities=27%  Similarity=0.470  Sum_probs=75.1

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcCCC
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGA  130 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~  130 (167)
                      +++|.|..|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|+++|++ .
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~---------------------~~C~~C~k~f~~~~~L~~H~~~h~~-~   57 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHI-RTHTGEKP---------------------FACDICGRKFARSDERKRHRDIQHI-L   57 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHCCCC---------------------EECTTTCCEESSHHHHHHHHHHHTH-H
T ss_pred             CCCCcCCCCCCccCCHHHHHHHH-HHcCCCCC---------------------ccCCCCCCccCCHHHHHHHHHHhCC-C
Confidence            47899999999999999999999 67887766                     7899999999999999999999885 7


Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      ++.|..|++.|.....|..|++.++
T Consensus        58 ~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           58 PILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHhhhHHHHHHHH
Confidence            8999999999999999999998655

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=1.7e-18  Score=97.04  Aligned_cols=58  Identities=22%  Similarity=0.523  Sum_probs=53.3

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcCCC
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGA  130 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~  130 (167)
                      |+||.|.+||+.|.....|..|+ ++|++++|                     |.|.+||+.|.+.+.|..|+++|.+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp---------------------~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR-RAHLGYRP---------------------RSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-HHHHTCCC---------------------EECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH-HHhCCCcC---------------------eECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            68999999999999999999999 78999887                     789999999999999999999987753

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=6.3e-18  Score=100.00  Aligned_cols=73  Identities=25%  Similarity=0.486  Sum_probs=65.4

Q ss_pred             CCCCcccccc--cccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceeccc--ccccccChhHHHHHHH
Q psy8167          49 VPIDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSFTRKDSLKKHNR  124 (167)
Q Consensus        49 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~--C~k~f~~~~~l~~H~~  124 (167)
                      .++++|.|..  |++.|.....|..|++..|.++++                     |.|.+  |++.|.....|..|++
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~---------------------~~C~~~~C~k~f~~~~~L~~H~~   61 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS---------------------FSCPEPACGKSFNFKKHLKEHMK   61 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC---------------------EECSCTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC---------------------eECCCCCCcCccCCHHHHHHHHH
Confidence            3457899987  999999999999999437987766                     68888  9999999999999999


Q ss_pred             hhcCCCCCCCCchhhhcC
Q psy8167         125 IFHGGADPKLMDEQMARG  142 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f~  142 (167)
                      +|+++++|.|.+|++.|.
T Consensus        62 ~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           62 LHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHHTSCCCSCCSSSCCCC
T ss_pred             HhCCCCCeeCCCCCCCCC
Confidence            999999999999999984

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.73  E-value=5.6e-18  Score=101.42  Aligned_cols=78  Identities=27%  Similarity=0.450  Sum_probs=71.9

Q ss_pred             cccc--cccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceeccc--ccccccChhHHHHHHHhhcC
Q psy8167          53 RIPC--TLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus        53 ~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~--C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +|.|  ..|++.|.....|..|+ ..|.++++                     |.|.+  |++.|.....|..|+++|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLP---------------------YECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCC---------------------EECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCC---------------------eeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            5889  89999999999999999 77877766                     78888  99999999999999999987


Q ss_pred             CCCCCCCc---hhhhcCCHHHHHHHHhhcC
Q psy8167         129 GADPKLMD---EQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       129 ~~~~~C~~---C~~~f~~~~~l~~H~~~~~  155 (167)
                         |.|..   |++.|.....|..|++.||
T Consensus        59 ---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           59 ---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             ---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence               99999   9999999999999999875

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=9.3e-17  Score=94.57  Aligned_cols=66  Identities=29%  Similarity=0.576  Sum_probs=57.2

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhh
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      ...++++|.|..|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|+++|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~L~~H~~~H   69 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHR-RTHTGEKP---------------------YKCDECGKAFIQRSHLIGHHRVH   69 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCCSCS---------------------EECSSSCCEESSHHHHHHHGGGS
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHH-HHcCCCcC---------------------eeCCCCCCccCCHHHHHHHHHHh
Confidence            345568899999999999999999999 77877665                     68888999999999999999999


Q ss_pred             cCCCCCCC
Q psy8167         127 HGGADPKL  134 (167)
Q Consensus       127 ~~~~~~~C  134 (167)
                      ++++||+|
T Consensus        70 ~~~~p~~C   77 (77)
T 2cot_A           70 TGSGPSSG   77 (77)
T ss_dssp             CCCCCCCC
T ss_pred             CCCCCCCC
Confidence            99999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=4.5e-18  Score=104.96  Aligned_cols=75  Identities=13%  Similarity=0.053  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceeccccccccc-ChhHHHHHHHhhcC-CCCCCCCchhhhcCC
Q psy8167          66 KDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT-RKDSLKKHNRIFHG-GADPKLMDEQMARGS  143 (167)
Q Consensus        66 ~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~  143 (167)
                      ...+..|+ ..|.++++                     |.|.+|++.|. ....|..|+++|++ +++|.|.+|++.|..
T Consensus         9 ~~~~~~h~-~~h~~~~~---------------------~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~   66 (98)
T 2gqj_A            9 GGPEEQWQ-RAIHERGE---------------------AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKS   66 (98)
T ss_dssp             CCSCSHHH-HTTTTTSC---------------------CCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSC
T ss_pred             CCcHHHHH-HHhccCCC---------------------cCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCC
Confidence            34456788 67887766                     68889999999 99999999999998 999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCccc
Q psy8167         144 ADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       144 ~~~l~~H~~~~~~~~~~~~  162 (167)
                      ...|.+|++.|++++|...
T Consensus        67 ~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           67 KAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             HHHHHHHHHHHSCSCSSCC
T ss_pred             HHHHHHHHHHHcCCCCCCC
Confidence            9999999999999888643

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=3.6e-17  Score=94.63  Aligned_cols=62  Identities=16%  Similarity=0.096  Sum_probs=57.9

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|.+|++.|++++|...
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p~   68 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS   68 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCSS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCCC
Confidence            45689999999999999999999999999999999999999999999999999998887653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.67  E-value=4.9e-17  Score=95.04  Aligned_cols=59  Identities=17%  Similarity=0.225  Sum_probs=56.4

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      .++|.|..|++.|.....|..|+++|+++++|+|.+|++.|.....|.+|++.|++++|
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            56689999999999999999999999999999999999999999999999999999876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.67  E-value=2.1e-17  Score=107.43  Aligned_cols=77  Identities=23%  Similarity=0.329  Sum_probs=68.4

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhh
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      .+.++++|.|..|++.|.....|..|+ .+|++++|                     |.|++||+.|.....|..|+++|
T Consensus        44 ~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~---------------------~~C~~C~k~F~~~~~L~~H~~~h  101 (133)
T 2lt7_A           44 IHSWEKKYPCRYCEKVFPLAEYRTKHE-IHHTGERR---------------------YQCLACGKSFINYQFMSSHIKSV  101 (133)
T ss_dssp             HHHCCSCEECSSSSCEESSHHHHHHHH-HHHHTCCC---------------------EEESSSCCEESSHHHHHHHHHHH
T ss_pred             HcCCCCCeeCCccCeecccccchhhhc-cccCCCcc---------------------ccCCCCCCCcCCHHHHHHHhHHh
Confidence            466788999999999999999999999 77988776                     78999999999999999999999


Q ss_pred             cCCC------CCCCCchhhhcCCHH
Q psy8167         127 HGGA------DPKLMDEQMARGSAD  145 (167)
Q Consensus       127 ~~~~------~~~C~~C~~~f~~~~  145 (167)
                      ++++      +|+|.+|++.|....
T Consensus       102 h~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A          102 HSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             TCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             cCCCCCCCCCCeecCCCCchhhhcc
Confidence            9875      488999999987653

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.2e-16  Score=98.89  Aligned_cols=71  Identities=20%  Similarity=0.242  Sum_probs=61.3

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcC---CCCcccccchhhhhhccccccccCceecccccccccChhHHHHH-
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHT---QNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKH-  122 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~---~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H-  122 (167)
                      ...++++|.|..|++.|.....|..|++.+|.   +++|                     |.|.+||+.|...+.|..| 
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekp---------------------f~C~~Cgk~F~~~~~L~~H~   70 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS---------------------YVCVECNFLTKRYDALSEHN   70 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCC---------------------EEETTTTEEESSTHHHHTHH
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCC---------------------cCCCCCCcccCCHHHHHHHH
Confidence            34677899999999999999999999954684   3444                     7899999999999999999 


Q ss_pred             HHhhcCCCCCCCCchh
Q psy8167         123 NRIFHGGADPKLMDEQ  138 (167)
Q Consensus       123 ~~~h~~~~~~~C~~C~  138 (167)
                      +++|.+++||.|.++.
T Consensus        71 ~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           71 LKYHPGEENFKLTMVK   86 (102)
T ss_dssp             HHTSTTCCCEEEEECC
T ss_pred             HHhcCCCCCeeCCccc
Confidence            8999999999999854

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.65  E-value=7.8e-17  Score=102.38  Aligned_cols=83  Identities=19%  Similarity=0.270  Sum_probs=75.0

Q ss_pred             CCCCcccccc--hhhhhhccccccc---------cCceecc--cccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCH
Q psy8167          78 TQNQPQHTNV--IEVALGARANAAF---------IDRIRCE--LCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSA  144 (167)
Q Consensus        78 ~~~~~~~c~~--c~~~~~~~~~~~l---------~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  144 (167)
                      .++++|.|..  |++.|..  ...|         .++|.|.  .|++.|.....|..|+++|+++++|.|.+|++.|...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~--~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   79 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFK--LSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRS   79 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSC--HHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCH
T ss_pred             CCCeeeeCCCCCCcchhCC--HHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCH
Confidence            5678999997  9999988  4444         6889999  7999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCccc
Q psy8167         145 DFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       145 ~~l~~H~~~~~~~~~~~~  162 (167)
                      ..|..|++.|+++.|...
T Consensus        80 ~~l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           80 DHLKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             HHHHHHHHHHHTCCCEEC
T ss_pred             HHHHHHHHHhcCCCCeeC
Confidence            999999999998887644

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.65  E-value=8.8e-17  Score=103.78  Aligned_cols=76  Identities=16%  Similarity=0.096  Sum_probs=62.3

Q ss_pred             CCcccccchhhhhhccccc----cc--------cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHH
Q psy8167          80 NQPQHTNVIEVALGARANA----AF--------IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFL  147 (167)
Q Consensus        80 ~~~~~c~~c~~~~~~~~~~----~l--------~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  147 (167)
                      .+.+.|.+|.+.|......    .|        .++|.|.+||+.|.....|..|+++|  +++|.|.+|++.|.....|
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHH
Confidence            3456777777766631011    11        67799999999999999999999997  8899999999999999999


Q ss_pred             HHHHhhcCCC
Q psy8167         148 EVVLNEDGEG  157 (167)
Q Consensus       148 ~~H~~~~~~~  157 (167)
                      .+|++.|++.
T Consensus       117 ~~H~~~h~~~  126 (129)
T 2wbt_A          117 LDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHHHCCc
Confidence            9999999864

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.64  E-value=1.2e-16  Score=88.56  Aligned_cols=55  Identities=22%  Similarity=0.217  Sum_probs=50.9

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      ++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++.|++
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            5689999999999999999999999999999999999999999999999998874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.64  E-value=1.9e-16  Score=94.80  Aligned_cols=57  Identities=19%  Similarity=0.190  Sum_probs=52.6

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHh-hcCCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLN-EDGEG  157 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~  157 (167)
                      .+.|.|++||+.|.....|.+|+++|++++||.|.+|++.|.....|.+|++ .|..+
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            5668999999999999999999999999999999999999999999999985 56554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.9e-16  Score=93.22  Aligned_cols=60  Identities=25%  Similarity=0.276  Sum_probs=57.0

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      .++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|.+|++.|++++|.
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            566899999999999999999999999999999999999999999999999999998874

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.64  E-value=6.5e-16  Score=90.20  Aligned_cols=64  Identities=31%  Similarity=0.593  Sum_probs=57.4

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhh
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      ...++++|.|..|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~---------------------~~C~~C~k~f~~~~~L~~H~~~H   68 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHK-TVHTGEKP---------------------YRCNICGAQFNRPANLKTHTRIH   68 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHH-HHHCCCCS---------------------EECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHH-HHcCCCCC---------------------EECCCCCchhCCHHHHHHHHHhc
Confidence            345568899999999999999999999 77888766                     78999999999999999999999


Q ss_pred             cCCCCC
Q psy8167         127 HGGADP  132 (167)
Q Consensus       127 ~~~~~~  132 (167)
                      ++++||
T Consensus        69 ~~~kp~   74 (74)
T 2lce_A           69 SGEKPY   74 (74)
T ss_dssp             CCSCCC
T ss_pred             CCCCCC
Confidence            999886

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.64  E-value=2.1e-16  Score=87.57  Aligned_cols=56  Identities=16%  Similarity=0.177  Sum_probs=53.3

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      +|.|..||+.|.....|..|+++|+++++|.|.+|++.|.....|.+|++.|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            47899999999999999999999999999999999999999999999999998764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.63  E-value=1.4e-16  Score=105.94  Aligned_cols=81  Identities=23%  Similarity=0.373  Sum_probs=72.9

Q ss_pred             ccccccccccCCHHHHHHHHHHhcCCCCcccccc--hhhhhhccccccc-------cCceeccc--ccccccChhHHHHH
Q psy8167          54 IPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV--IEVALGARANAAF-------IDRIRCEL--CDKSFTRKDSLKKH  122 (167)
Q Consensus        54 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~--c~~~~~~~~~~~l-------~k~~~C~~--C~k~f~~~~~l~~H  122 (167)
                      |.|..|++.|.....|..|+ ..|.++++|.|..  |++.|.....+..       .++|.|.+  |++.|.....|..|
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHI-RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHT-HHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred             cCCCCcccccCCHHHHHHHH-HhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHH
Confidence            89999999999999999999 6799999999998  9999988333222       67899997  99999999999999


Q ss_pred             HHhhcCCCCCCCC
Q psy8167         123 NRIFHGGADPKLM  135 (167)
Q Consensus       123 ~~~h~~~~~~~C~  135 (167)
                      +++|+++++|.|.
T Consensus       142 ~~~H~~~k~~~c~  154 (155)
T 2rpc_A          142 MHVHTSDKSGPSS  154 (155)
T ss_dssp             STTTTSCCCSCSC
T ss_pred             HHHhcCCCCCCCC
Confidence            9999999999985

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=4e-16  Score=95.79  Aligned_cols=74  Identities=9%  Similarity=0.024  Sum_probs=63.4

Q ss_pred             cccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccc-cChhHHHHHHHhhcCCCCCCCCchhh
Q psy8167          61 KTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSF-TRKDSLKKHNRIFHGGADPKLMDEQM  139 (167)
Q Consensus        61 ~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f-~~~~~l~~H~~~h~~~~~~~C~~C~~  139 (167)
                      ..|.....|..|+ ..|.++++                     |.|.+||+.| .....|..|+++| ++++|.|.+|++
T Consensus        14 ~~~~~~~~~~~~~-~~~~~~~~---------------------~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk   70 (96)
T 2ctd_A           14 PVYAAGSLEEQWY-LEIVDKGS---------------------VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGK   70 (96)
T ss_dssp             CSSCTTCHHHHHH-HHHHHTSC---------------------EECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCC
T ss_pred             CCCCCchHHHHHH-HHhcCCCC---------------------cCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCC
Confidence            3456667788888 65666555                     7899999999 9999999999999 999999999999


Q ss_pred             hcCCHHHHHHH-HhhcCCC
Q psy8167         140 ARGSADFLEVV-LNEDGEG  157 (167)
Q Consensus       140 ~f~~~~~l~~H-~~~~~~~  157 (167)
                      .|.....|..| +++|.+.
T Consensus        71 ~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           71 QLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCSSHHHHHHHHHHHTCCC
T ss_pred             eeCCHHHHHHHhHHhcCCC
Confidence            99999999999 8888753

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.1e-15  Score=91.58  Aligned_cols=79  Identities=24%  Similarity=0.417  Sum_probs=64.1

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHH
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNR  124 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~  124 (167)
                      ...+.++++|.|..|++.|.....|..|++..|.....                  .++|.|.+|++.|.....|..|++
T Consensus         7 ~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~------------------~~~~~C~~C~~~f~~~~~L~~H~~   68 (86)
T 1x6h_A            7 GRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFV------------------PAAFVCSKCGKTFTRRNTMARHAD   68 (86)
T ss_dssp             STTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCC------------------CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             cceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCC------------------CcceECCCCCChhCCHHHHHHHHH
Confidence            34567788999999999999999999998444433200                  234889999999999999999999


Q ss_pred             hhcCCCCCCCCchhhhc
Q psy8167         125 IFHGGADPKLMDEQMAR  141 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f  141 (167)
                      +|++++++.|..|+..|
T Consensus        69 ~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           69 NCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HCCCCCSCCCCCCCCCC
T ss_pred             HccCCCCcccCCCCCCC
Confidence            99999999999998765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.3e-16  Score=91.70  Aligned_cols=59  Identities=22%  Similarity=0.256  Sum_probs=54.4

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      .++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|.+|++.|+++.+
T Consensus        12 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            34589999999999999999999999999999999999999999999999999987543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.4e-16  Score=100.02  Aligned_cols=85  Identities=12%  Similarity=0.048  Sum_probs=73.8

Q ss_pred             CCCCcccccchhhhhhccccccc-------cCceecccccccccChhHHHHHHHh---hcCCCCCCCCchhhhcCCHHHH
Q psy8167          78 TQNQPQHTNVIEVALGARANAAF-------IDRIRCELCDKSFTRKDSLKKHNRI---FHGGADPKLMDEQMARGSADFL  147 (167)
Q Consensus        78 ~~~~~~~c~~c~~~~~~~~~~~l-------~k~~~C~~C~k~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l  147 (167)
                      +++++|.|..|++.|.....+..       .++|.|.+|++.|.....|..|++.   +.++++|.|.+|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            56789999999999988333222       6789999999999999999999996   4678899999999999999999


Q ss_pred             HHHHhhcCCCCCccc
Q psy8167         148 EVVLNEDGEGEPVSI  162 (167)
Q Consensus       148 ~~H~~~~~~~~~~~~  162 (167)
                      ..|++.|+++.|...
T Consensus        83 ~~H~~~h~~~~~~~C   97 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKC   97 (124)
T ss_dssp             HHHHHHHSSSCSEEC
T ss_pred             HHHHHHcCCCCCccC
Confidence            999999998887643

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=3.5e-16  Score=93.76  Aligned_cols=60  Identities=18%  Similarity=0.200  Sum_probs=54.8

Q ss_pred             eecccccccccChhHHHHHHHhhcCC----CCCCCCchhhhcCCHHHHHHHHhhcCCCCCcccc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGG----ADPKLMDEQMARGSADFLEVVLNEDGEGEPVSIT  163 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  163 (167)
                      |.|.+|++.|.....|..|++.|+.+    ++|.|.+|++.|.....|..|++.|+++.+....
T Consensus        16 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A           16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             CcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            78999999999999999999988876    7899999999999999999999999988876543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=2e-16  Score=93.14  Aligned_cols=56  Identities=18%  Similarity=0.177  Sum_probs=49.2

Q ss_pred             eecccccccccChhHHHHHHH-hhcCC-CCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNR-IFHGG-ADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      |.|.+|++.|.....|..|++ .|.++ ++|.|.+|++.|.....|..|++.+|+..+
T Consensus        16 ~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A           16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             eECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            789999999999999999998 45554 799999999999999999999998765443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1e-15  Score=85.65  Aligned_cols=56  Identities=21%  Similarity=0.266  Sum_probs=51.7

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHH-hhcCCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVL-NEDGEG  157 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~~~~~  157 (167)
                      ++|.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            46899999999999999999999999999999999999999999999997 566554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=3.6e-15  Score=86.05  Aligned_cols=64  Identities=23%  Similarity=0.484  Sum_probs=57.5

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhh
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      .+.++++|.|..|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|+++|
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~---------------------~~C~~C~~~f~~~~~L~~H~~~h   60 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHE-RIHCTDRP---------------------FKCNYCSFDTKQPSNLSKHMKKF   60 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSCS---------------------EECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCC---------------------EeCCCCCCccCCHHHHHHHHHHH
Confidence            356678999999999999999999999 77988766                     78999999999999999999999


Q ss_pred             cCCCCC
Q psy8167         127 HGGADP  132 (167)
Q Consensus       127 ~~~~~~  132 (167)
                      +++++.
T Consensus        61 ~~~~p~   66 (70)
T 1x5w_A           61 HGDMSG   66 (70)
T ss_dssp             HSSSCC
T ss_pred             hCCCCC
Confidence            998774

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.58  E-value=7.5e-16  Score=98.59  Aligned_cols=83  Identities=22%  Similarity=0.340  Sum_probs=67.8

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHhcCCCCcccccc--hhhhhhccccccc-------cCceecc--cccccccChhH
Q psy8167          50 PIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV--IEVALGARANAAF-------IDRIRCE--LCDKSFTRKDS  118 (167)
Q Consensus        50 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~--c~~~~~~~~~~~l-------~k~~~C~--~C~k~f~~~~~  118 (167)
                      ++++|.|..|++.|.....|..|+ ..|.++++|.|..  |++.|.....+..       .++|.|+  .|++.|.....
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  109 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN  109 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHH
Confidence            457899999999999999999999 7899999999986  9999988333222       6789996  59999999999


Q ss_pred             HHHHHHhhcCCCCCC
Q psy8167         119 LKKHNRIFHGGADPK  133 (167)
Q Consensus       119 l~~H~~~h~~~~~~~  133 (167)
                      |..|+++|+++++++
T Consensus       110 L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C          110 LKSHILTHAKAKNNQ  124 (124)
T ss_dssp             THHHHHHHC------
T ss_pred             HHHHHHHHcccccCC
Confidence            999999999988753

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=2e-15  Score=88.94  Aligned_cols=60  Identities=15%  Similarity=0.072  Sum_probs=52.3

Q ss_pred             cCceecccccccccChhHHHHHHHhhcC---CCCCCCCchhhhcCCHHHHHHHHhhcC-CCCCc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHG---GADPKLMDEQMARGSADFLEVVLNEDG-EGEPV  160 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~~-~~~~~  160 (167)
                      +++|.|.+|++.|.....|..|+++|++   +++|.|.+|++.|.....|.+|++.+| +..|.
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            3458999999999999999999999986   899999999999999999999996544 44443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2e-15  Score=93.42  Aligned_cols=64  Identities=13%  Similarity=0.074  Sum_probs=57.6

Q ss_pred             cCceecccccccccChhHHHHHHHh-h---cCCCCCCCCchhhhcCCHHHHHHH-HhhcCCCCCccccc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRI-F---HGGADPKLMDEQMARGSADFLEVV-LNEDGEGEPVSITV  164 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~-h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~~~~  164 (167)
                      +++|.|.+||+.|...+.|..|++. |   .++++|.|.+||+.|.....|..| ++.|.+++|.....
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            5679999999999999999999984 7   568899999999999999999999 89999999876543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.9e-15  Score=85.41  Aligned_cols=56  Identities=11%  Similarity=0.060  Sum_probs=51.2

Q ss_pred             cCceecccccccccChhHHHHHHHh-h-cCCCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRI-F-HGGADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      +++|.|..||+.|.....|..|++. | .++++|.|..|++.|.....|..|++.||+
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3458999999999999999999998 5 478999999999999999999999998875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1e-14  Score=84.62  Aligned_cols=64  Identities=31%  Similarity=0.587  Sum_probs=57.0

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHH
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNR  124 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~  124 (167)
                      ...+.++++|.|..|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|++
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~L~~H~~   63 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGEKP---------------------YKCLECGKAFSQNSGLINHQR   63 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCSCC---------------------EECSSSCCEESSHHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHH-HhcCCCCC---------------------eECCCCCcccCCHHHHHHHHH
Confidence            34577889999999999999999999999 67887766                     789999999999999999999


Q ss_pred             hhcCCC
Q psy8167         125 IFHGGA  130 (167)
Q Consensus       125 ~h~~~~  130 (167)
                      +|+++.
T Consensus        64 ~H~~~~   69 (72)
T 1x6e_A           64 IHTSGP   69 (72)
T ss_dssp             HHHSSS
T ss_pred             hcCCCC
Confidence            988764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.54  E-value=2.4e-14  Score=85.60  Aligned_cols=62  Identities=19%  Similarity=0.449  Sum_probs=52.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHh
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      ......++|.|.+|++.|.....|.+|+ ++|.+++|                     |.|.+|++.|.+...|.+|++.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~-~~H~~~k~---------------------~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHL-RLLHAAQV---------------------FPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHH-HTTSCSSS---------------------EECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhh-hhccCCCc---------------------cCCCCCCCEeCCHHHHHHhCcc
Confidence            3445567899999999999999999999 77988777                     7899999999999999999854


Q ss_pred             -hcCC
Q psy8167         126 -FHGG  129 (167)
Q Consensus       126 -h~~~  129 (167)
                       |.++
T Consensus        79 ~H~~E   83 (85)
T 2lv2_A           79 CHPSE   83 (85)
T ss_dssp             TCTTC
T ss_pred             cCcCC
Confidence             5444

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=3.6e-17  Score=95.11  Aligned_cols=70  Identities=17%  Similarity=0.162  Sum_probs=58.8

Q ss_pred             HHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167          67 DSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus        67 ~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      ..|..|+ ..|.++++|.|..|++.|.....+...++|.|.+||+.|.....|..|+++|+++++|.|.+|
T Consensus         4 ~~l~~H~-~~h~~~~~~~C~~C~k~f~~~~~l~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQ-KIHLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCC-CCCCCCSEEECSSSCCEEECCCCCCCSSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHH-HHhCCCCCeeCCcccchhCCHHHhCcCCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3456777 678888888888888888874444347889999999999999999999999999999999987

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.52  E-value=1.6e-14  Score=79.79  Aligned_cols=56  Identities=30%  Similarity=0.573  Sum_probs=48.4

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcC
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +++|.|..|++.|.....|..|+ .+|.++++                     |.|.+|++.|.....|..|+++||+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHL-RTHTGEKP---------------------YKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHH-HHHHCCCC---------------------EECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHH-HHcCCCCC---------------------cCCCCCcchhCCHHHHHHHHHHhcC
Confidence            57899999999999999999999 67888766                     7899999999999999999999874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.51  E-value=1.2e-14  Score=87.62  Aligned_cols=56  Identities=18%  Similarity=0.207  Sum_probs=53.3

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      +++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|++.|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            46799999999999999999999999999999999999999999999999998874

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=3.7e-15  Score=85.07  Aligned_cols=58  Identities=16%  Similarity=0.149  Sum_probs=54.2

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCC-chhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLM-DEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      .++|.|.+||+.|. ...|..|+++ .+++||.|. .|++.|.....|..|++.|.+..|+
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCcC
Confidence            56799999999999 9999999999 999999999 9999999999999999999887764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.51  E-value=4e-14  Score=78.15  Aligned_cols=56  Identities=32%  Similarity=0.551  Sum_probs=51.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcCCC
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGA  130 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~  130 (167)
                      +|.|..|++.|.....|..|+ ..|.++++                     |.|.+|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI-RTHTDVRP---------------------YHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHTSSCCC---------------------EECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHH-HhcCCCCC---------------------ccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            589999999999999999999 77988766                     789999999999999999999998876

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.7e-14  Score=83.83  Aligned_cols=55  Identities=24%  Similarity=0.366  Sum_probs=50.9

Q ss_pred             cCceecc--cccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         101 IDRIRCE--LCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       101 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      .++|.|+  .|++.|.....|..|+++|.++++|.|.+|++.|.....|.+|++.|.
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            4458897  599999999999999999999999999999999999999999999874

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=6.6e-15  Score=90.62  Aligned_cols=69  Identities=20%  Similarity=0.365  Sum_probs=59.2

Q ss_pred             cCccCCCCcccccccccccC-CHHHHHHHHHHhcCC-CCcccccchhhhhhccccccccCceecccccccccChhHHHHH
Q psy8167          45 VGPVVPIDRIPCTLCDKTFT-RKDSLKKHIRIFHTQ-NQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKH  122 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~~h~~-~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H  122 (167)
                      ...+.++++|.|..|++.|. ....|..|+ +.|.+ +++                     |.|.+|++.|.....|..|
T Consensus        16 ~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~-~~h~~~~~~---------------------~~C~~C~k~F~~~~~L~~H   73 (98)
T 2gqj_A           16 QRAIHERGEAVCPTCNVVTRKTLVGLKKHM-EVCQKLQDA---------------------LKCQHCRKQFKSKAGLNYH   73 (98)
T ss_dssp             HHTTTTTSCCCCTTTCCCCSSCSHHHHHHH-HHHHHHHHH---------------------HSCSSSCCCCSCHHHHHHH
T ss_pred             HHHhccCCCcCCCCCCCChhhhHHHHHHHH-HHHcCCCCC---------------------EECCCCCCccCCHHHHHHH
Confidence            34577789999999999999 999999999 66765 444                     7899999999999999999


Q ss_pred             HHhhcCCCCCCCC
Q psy8167         123 NRIFHGGADPKLM  135 (167)
Q Consensus       123 ~~~h~~~~~~~C~  135 (167)
                      +++|+++++....
T Consensus        74 ~~~h~~~kp~~~~   86 (98)
T 2gqj_A           74 TMAEHSAKPSDAE   86 (98)
T ss_dssp             HHHHSCSCSSCCC
T ss_pred             HHHHcCCCCCCCC
Confidence            9999999886543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.1e-13  Score=81.18  Aligned_cols=67  Identities=30%  Similarity=0.450  Sum_probs=57.5

Q ss_pred             ccCccCCCCcccccccccccCCHHHHHHHHHHhcCCC-CcccccchhhhhhccccccccCceecccccccccChhHHHHH
Q psy8167          44 SVGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQN-QPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKH  122 (167)
Q Consensus        44 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~-~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H  122 (167)
                      ....+.++++|.|.+|++.|.....|..|++..|.++ ++                     |.|.+|++.|.....|..|
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~---------------------~~C~~C~~~f~~~~~L~~H   64 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK---------------------FHCPHCDTVIARKSDLGVH   64 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSS---------------------EECSSSSCEESSHHHHHHH
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCc---------------------cCCCCCCCccCCHHHHHHH
Confidence            3456778899999999999999999999995578764 34                     7999999999999999999


Q ss_pred             HHhhcCCCC
Q psy8167         123 NRIFHGGAD  131 (167)
Q Consensus       123 ~~~h~~~~~  131 (167)
                      ++++|+...
T Consensus        65 ~~~~H~~~~   73 (77)
T 2ct1_A           65 LRKQHSYSG   73 (77)
T ss_dssp             HHHTSCCSC
T ss_pred             HHHhCCCCC
Confidence            999887653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=4.3e-14  Score=80.45  Aligned_cols=61  Identities=26%  Similarity=0.525  Sum_probs=53.1

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhc-CCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHh
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFH-TQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h-~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      .+.++++|.|..|++.|.....|..|++..| .++++                     |.|+.|++.|...+.|..|+++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~---------------------~~C~~C~k~f~~~~~L~~H~~~   62 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV---------------------YPCPFCFKEFTRKDNMTAHVKI   62 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC---------------------EECTTTCCEESCHHHHHHHHHH
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcC---------------------eECCCCCCccCCHHHHHHHHHH
Confidence            3566789999999999999999999995447 46555                     7899999999999999999999


Q ss_pred             hcC
Q psy8167         126 FHG  128 (167)
Q Consensus       126 h~~  128 (167)
                      ||+
T Consensus        63 ~H~   65 (66)
T 2drp_A           63 IHK   65 (66)
T ss_dssp             HTC
T ss_pred             HcC
Confidence            886

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.47  E-value=5.3e-14  Score=85.90  Aligned_cols=62  Identities=29%  Similarity=0.412  Sum_probs=57.4

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .++|.|.+|++.|.....|..|++.|+++++|.|.+|++.|.....|..|++.|++++|...
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   67 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC   67 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEEC
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccC
Confidence            45689999999999999999999999999999999999999999999999999998877543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.47  E-value=9.3e-14  Score=86.37  Aligned_cols=62  Identities=18%  Similarity=0.191  Sum_probs=58.0

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++.|++++|...
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   76 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC   76 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSC
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeEC
Confidence            56799999999999999999999999999999999999999999999999999998887543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=1.5e-13  Score=83.79  Aligned_cols=70  Identities=27%  Similarity=0.368  Sum_probs=58.1

Q ss_pred             cccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcCCCCC
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADP  132 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~  132 (167)
                      .+.|..|++.|.....|..|++..|.++++..+..|             +.|.|.+|++.|.....|..|+++|+++++|
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c-------------~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   91 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------YWEECPREGKSFKAKYKLVNHIRVHTGEKSG   91 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC-------------CCTTCSSTTCCCSSHHHHHHHHHHHHTCCCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccce-------------eccCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            467999999999999999999434888776433332             1268999999999999999999999999999


Q ss_pred             CCC
Q psy8167         133 KLM  135 (167)
Q Consensus       133 ~C~  135 (167)
                      .|.
T Consensus        92 ~C~   94 (95)
T 2ej4_A           92 PSS   94 (95)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            996

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.45  E-value=5.7e-14  Score=83.17  Aligned_cols=60  Identities=17%  Similarity=0.148  Sum_probs=56.1

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|.|.+|++.|.....|..|++.|+++++|.|..|++.|.....|..|++.|++++|...
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   60 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC   60 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEEC
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcC
Confidence            488999999999999999999999999999999999999999999999999998877543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=1e-13  Score=84.48  Aligned_cols=60  Identities=17%  Similarity=0.238  Sum_probs=55.6

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC--CCc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEG--EPV  160 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~--~~~  160 (167)
                      .++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++.|+++  +|.
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   66 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY   66 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSB
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCce
Confidence            456899999999999999999999999999999999999999999999999999876  554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.2e-13  Score=81.26  Aligned_cols=62  Identities=10%  Similarity=0.176  Sum_probs=55.9

Q ss_pred             cCceeccc--ccccccChhHHHHHHH-hhcCCCCCCCCc--hhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         101 IDRIRCEL--CDKSFTRKDSLKKHNR-IFHGGADPKLMD--EQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       101 ~k~~~C~~--C~k~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .++|.|..  |++.|.....|..|++ .|.++++|.|.+  |++.|.....|..|++.|++++|...
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C   71 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   71 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeC
Confidence            34577876  9999999999999999 799999999999  99999999999999999998887543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=1.6e-13  Score=83.57  Aligned_cols=58  Identities=16%  Similarity=0.163  Sum_probs=53.7

Q ss_pred             eecccccccccChhHHHHHHHh-hcCCCC--------CCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRI-FHGGAD--------PKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      +.|..|++.|.....|..|+++ |.++++        |.|.+|++.|.....|..|+++|++++|..
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            6799999999999999999998 777777        999999999999999999999999988764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1.7e-13  Score=80.52  Aligned_cols=63  Identities=29%  Similarity=0.473  Sum_probs=51.5

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhc
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      +.++++|.|.+|++.|.....|..|+ ..|.+...                  .++|.|.+|++.|.....|..|++.+|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~------------------~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQ-RKHAETVA------------------ALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHH-HHHHHHTT------------------TCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHH-HHhhccCC------------------CcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            56789999999999999999999999 66764100                  234899999999999999999996555


Q ss_pred             CC
Q psy8167         128 GG  129 (167)
Q Consensus       128 ~~  129 (167)
                      ..
T Consensus        63 ~~   64 (78)
T 2d9h_A           63 PA   64 (78)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.42  E-value=1.1e-13  Score=80.12  Aligned_cols=54  Identities=20%  Similarity=0.217  Sum_probs=50.7

Q ss_pred             cCceeccc--ccccccChhHHHHHHHhhcCCCCCCCCc--hhhhcCCHHHHHHHHhhc
Q psy8167         101 IDRIRCEL--CDKSFTRKDSLKKHNRIFHGGADPKLMD--EQMARGSADFLEVVLNED  154 (167)
Q Consensus       101 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  154 (167)
                      .++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            56789988  9999999999999999999999999975  999999999999999875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.1e-13  Score=84.86  Aligned_cols=61  Identities=20%  Similarity=0.373  Sum_probs=52.4

Q ss_pred             cCCCCccccccccccc-CCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHH-HHh
Q psy8167          48 VVPIDRIPCTLCDKTF-TRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKH-NRI  125 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f-~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H-~~~  125 (167)
                      +.++++|.|..|++.| .....|..|+ ++| ++++                     |.|.+||+.|.....|..| +++
T Consensus        29 ~~~~~~~~C~~C~k~F~~~~~~L~~H~-~~h-~~k~---------------------~~C~~Cgk~F~~~~~L~~H~~~~   85 (96)
T 2ctd_A           29 IVDKGSVSCPTCQAVGRKTIEGLKKHM-ENC-KQEM---------------------FTCHHCGKQLRSLAGMKYHVMAN   85 (96)
T ss_dssp             HHHTSCEECTTTCSCEESSHHHHHHHH-HHH-CCCC---------------------CCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             hcCCCCcCCCCCCCCcccCHHHHHHHH-HHH-CCCC---------------------eECCCCCCeeCCHHHHHHHhHHh
Confidence            4456889999999999 9999999999 678 7766                     6899999999999999999 888


Q ss_pred             hcCCCCC
Q psy8167         126 FHGGADP  132 (167)
Q Consensus       126 h~~~~~~  132 (167)
                      |.+ +||
T Consensus        86 H~~-~p~   91 (96)
T 2ctd_A           86 HNS-LPS   91 (96)
T ss_dssp             TCC-CSS
T ss_pred             cCC-CCC
Confidence            654 454

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.9e-13  Score=85.57  Aligned_cols=61  Identities=18%  Similarity=0.082  Sum_probs=56.0

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .++|.| .|++.|.....|..|++.|+++++|.|.+|++.|.....|..|++.|++++|...
T Consensus         8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   68 (110)
T 2csh_A            8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC   68 (110)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEEC
T ss_pred             CCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeC
Confidence            345899 8999999999999999999999999999999999999999999999998877543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.41  E-value=1.7e-13  Score=82.60  Aligned_cols=62  Identities=21%  Similarity=0.305  Sum_probs=56.5

Q ss_pred             cCceecc--cccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         101 IDRIRCE--LCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       101 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.....|..|++.|+++.|...
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   65 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC   65 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEEC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccC
Confidence            3568998  6999999999999999999999999999999999999999999999988877543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=5.9e-13  Score=74.17  Aligned_cols=56  Identities=38%  Similarity=0.869  Sum_probs=48.7

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHH-HhhcCC
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHN-RIFHGG  129 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~-~~h~~~  129 (167)
                      ++|.|..|++.|.....|..|+ ..|.++++                     |.|..|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEKP---------------------YPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSCS---------------------EECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHH-HHhCCCCC---------------------ccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4699999999999999999999 67987766                     78999999999999999997 565543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=1.3e-12  Score=75.69  Aligned_cols=61  Identities=34%  Similarity=0.717  Sum_probs=52.7

Q ss_pred             cCccCCCCccccc--ccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHH
Q psy8167          45 VGPVVPIDRIPCT--LCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKH  122 (167)
Q Consensus        45 ~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H  122 (167)
                      ...+.++++|.|.  .|++.|.....|..|+ ..|.++++                     |.|.+||+.|.....|..|
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~h~~~~~---------------------~~C~~C~~~f~~~~~l~~H   68 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKP---------------------FQCRICMRNFSRSDHLTTH   68 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHH-HHHHCCCC---------------------EECTTTCCEESCHHHHHHH
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHH-HhhCCCCC---------------------eECCCCCchhCCHHHHHHH
Confidence            3446667899997  5999999999999999 67887766                     7899999999999999999


Q ss_pred             HHhhc
Q psy8167         123 NRIFH  127 (167)
Q Consensus       123 ~~~h~  127 (167)
                      +++|+
T Consensus        69 ~~~Ht   73 (73)
T 1f2i_G           69 IRTHT   73 (73)
T ss_dssp             HTTCC
T ss_pred             HHhcC
Confidence            99863

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.33  E-value=1e-12  Score=71.76  Aligned_cols=43  Identities=23%  Similarity=0.294  Sum_probs=40.2

Q ss_pred             cCceecccccccccChhHHHHHHH-hhcCCCCCCCCchhhhcCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNR-IFHGGADPKLMDEQMARGS  143 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  143 (167)
                      +++|.|.+|++.|.....|..|++ +|.++++|.|.+|++.|.+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            567999999999999999999997 8999999999999999975

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.32  E-value=7.5e-13  Score=78.72  Aligned_cols=54  Identities=17%  Similarity=0.125  Sum_probs=51.4

Q ss_pred             ceec--ccccccccChhHHHHHHHhhcCCCCCCCCc--hhhhcCCHHHHHHHHhhcCC
Q psy8167         103 RIRC--ELCDKSFTRKDSLKKHNRIFHGGADPKLMD--EQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       103 ~~~C--~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  156 (167)
                      +|.|  ..||+.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            4789  999999999999999999999999999998  99999999999999998876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.9e-12  Score=73.61  Aligned_cols=59  Identities=24%  Similarity=0.413  Sum_probs=50.7

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecc-cccccccChhHHHHHHHhhc
Q psy8167          49 VPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE-LCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus        49 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~-~C~k~f~~~~~l~~H~~~h~  127 (167)
                      -++++|.|..|++.|. ...|..|+ .+ .+++|                     |.|. +||+.|..++.|..|+++|.
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~-~~-~~~~p---------------------~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQ-YQ-CPRLP---------------------VACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHH-HH-CSSSE---------------------EECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHH-HH-cCCcC---------------------ccCCcccCcccccHHHHHHHHHhhc
Confidence            3467899999999999 99999999 55 66655                     7899 89999999999999999987


Q ss_pred             CCCC
Q psy8167         128 GGAD  131 (167)
Q Consensus       128 ~~~~  131 (167)
                      ...+
T Consensus        62 ~~~~   65 (66)
T 2eod_A           62 NTAL   65 (66)
T ss_dssp             SSCC
T ss_pred             ccCc
Confidence            6554

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.29  E-value=7.6e-12  Score=72.20  Aligned_cols=57  Identities=33%  Similarity=0.691  Sum_probs=49.5

Q ss_pred             cCCCCcccccc--cccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceeccc--ccccccChhHHHHHH
Q psy8167          48 VVPIDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSFTRKDSLKKHN  123 (167)
Q Consensus        48 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~--C~k~f~~~~~l~~H~  123 (167)
                      ....++|.|..  |++.|.....|..|+ ..|.++++                     |.|.+  |++.|.....|..|+
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~---------------------~~C~~~~C~k~f~~~~~l~~H~   69 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHT-RTHTGEKP---------------------FSCSWKGCERRFARSDELSRHR   69 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHH-HHHSSSCS---------------------EECCCTTCCCEESSHHHHHHHT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHH-HhcCCCCC---------------------ccCCCCCCCcccCCHHHHHhHh
Confidence            44557899999  999999999999999 77988776                     67854  999999999999999


Q ss_pred             Hhh
Q psy8167         124 RIF  126 (167)
Q Consensus       124 ~~h  126 (167)
                      ++|
T Consensus        70 ~~H   72 (72)
T 2epa_A           70 RTH   72 (72)
T ss_dssp             TTC
T ss_pred             hcC
Confidence            875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=4.9e-14  Score=88.93  Aligned_cols=59  Identities=10%  Similarity=0.111  Sum_probs=52.5

Q ss_pred             eecccccccccChhHHHHHHHh--hcCCCCCC-CCchhhhc--CCHHHHHHHHhhcCCCCCccc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRI--FHGGADPK-LMDEQMAR--GSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      |.|.+|++.|.....|..|+++  |.+.+++. |.+|++.|  .....|..|++.|.+++|...
T Consensus        20 ~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A           20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             EEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             EECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            7899999999999999999998  77777654 99999999  999999999999998888653

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.28  E-value=4.8e-13  Score=73.08  Aligned_cols=51  Identities=10%  Similarity=-0.116  Sum_probs=47.3

Q ss_pred             cccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         110 DKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       110 ~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      ++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|++++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            477888999999999999999999999999999999999999999988763

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.28  E-value=2.6e-12  Score=77.13  Aligned_cols=61  Identities=20%  Similarity=0.269  Sum_probs=56.0

Q ss_pred             Cceeccc--ccccccChhHHHHHHHhhcCCCCCCCC--chhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         102 DRIRCEL--CDKSFTRKDSLKKHNRIFHGGADPKLM--DEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       102 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +.|.|..  |++.|.....|..|++.|+++++|.|.  .|++.|.....|..|++.|+++.|...
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   68 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC   68 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccC
Confidence            4589999  999999999999999999999999997  599999999999999999998877543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=4.4e-12  Score=69.19  Aligned_cols=49  Identities=27%  Similarity=0.412  Sum_probs=41.2

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhc
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGA   94 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~   94 (167)
                      ..+.++++|.|..|++.|.....|..|++.+|.++++|.|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3466778999999999999999999999548999999877777776654

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=2.5e-12  Score=68.38  Aligned_cols=39  Identities=21%  Similarity=0.318  Sum_probs=36.9

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhh
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQM  139 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~  139 (167)
                      .++|.|.+|++.|.....|..|+++|+++++|.|.+|++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            567999999999999999999999999999999999986

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.26  E-value=7.4e-12  Score=76.74  Aligned_cols=62  Identities=21%  Similarity=0.268  Sum_probs=57.0

Q ss_pred             cCceeccc--ccccccChhHHHHHHHhhcCCCCCCCC--chhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         101 IDRIRCEL--CDKSFTRKDSLKKHNRIFHGGADPKLM--DEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       101 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .+.|.|..  |++.|.....|..|+++|+++++|.|.  .|++.|.....|..|++.|++++|...
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   78 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC   78 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBC
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeEC
Confidence            56789996  999999999999999999999999997  599999999999999999999887644

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.26  E-value=6.9e-12  Score=78.01  Aligned_cols=61  Identities=15%  Similarity=0.319  Sum_probs=54.8

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHH-hhcCCC
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNR-IFHGGA  130 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~~  130 (167)
                      ++|.|.+|++.|.....|..|+ . |.++++                     |.|.+|++.|.....|..|++ .|.+++
T Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~---------------------~~C~~C~~~f~~~~~L~~H~~~~H~~~~   97 (107)
T 1wjp_A           41 NAAVCPYCSLRFFSPELKQEHE-S-KCEYKK---------------------LTCLECMRTFKSSFSIWRHQVEVHNQNN   97 (107)
T ss_dssp             HSBCCTTTCCCBSSHHHHHHHH-H-HCSTGG---------------------GEEGGGTEECSSHHHHHHHHHHTSCCCC
T ss_pred             CCccCCCCCCccCCHHHHHHHH-H-cCCCCC---------------------ccCccccchhCCHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999 6 887766                     688889999999999999997 888888


Q ss_pred             CCCCC
Q psy8167         131 DPKLM  135 (167)
Q Consensus       131 ~~~C~  135 (167)
                      +|.|.
T Consensus        98 ~~~~~  102 (107)
T 1wjp_A           98 MAPTS  102 (107)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            88875

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.7e-12  Score=67.57  Aligned_cols=35  Identities=31%  Similarity=0.587  Sum_probs=30.4

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A           12 HFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            37888888999999999999999888889999877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.25  E-value=1.9e-12  Score=68.16  Aligned_cols=34  Identities=24%  Similarity=0.519  Sum_probs=28.8

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|...+.|..|+++|.++++|+|.+|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A           13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6788888888888888888888888888888876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.3e-12  Score=67.17  Aligned_cols=35  Identities=29%  Similarity=0.497  Sum_probs=31.0

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|...+.|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A           12 PHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            37888889999999999999999999999999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.24  E-value=3.4e-12  Score=67.18  Aligned_cols=35  Identities=29%  Similarity=0.604  Sum_probs=30.6

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A           12 RYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            37888888999999999999999999999999877

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.5e-12  Score=67.10  Aligned_cols=34  Identities=29%  Similarity=0.601  Sum_probs=29.9

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|...+.|..|+++|+++++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A           13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             eeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            7888888889999999999998888889998877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.7e-12  Score=67.02  Aligned_cols=35  Identities=23%  Similarity=0.438  Sum_probs=30.9

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           12 PYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            37888899999999999999999999999999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.2e-12  Score=66.62  Aligned_cols=35  Identities=20%  Similarity=0.358  Sum_probs=31.1

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|...+.|..|+++|.++++|.|.+|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A           10 PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47888899999999999999999999999999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.1e-12  Score=67.35  Aligned_cols=35  Identities=26%  Similarity=0.507  Sum_probs=30.3

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|...+.|..|+++|.++++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           12 PYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            37888888999999999999999888889999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.7e-12  Score=66.63  Aligned_cols=34  Identities=26%  Similarity=0.422  Sum_probs=29.0

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|...+.|..|+++|.++++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             eECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7788888888888888888888888888888876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=67.08  Aligned_cols=35  Identities=29%  Similarity=0.472  Sum_probs=30.7

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A           12 PYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            37888889999999999999999989999999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.23  E-value=3e-12  Score=67.40  Aligned_cols=35  Identities=23%  Similarity=0.550  Sum_probs=30.7

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           12 PFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             SBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            37888888999999999999999999999999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=67.22  Aligned_cols=34  Identities=26%  Similarity=0.517  Sum_probs=27.9

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|+++|.+++||.|.+|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             eECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            6777788888888888888888888888888876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=67.06  Aligned_cols=35  Identities=29%  Similarity=0.498  Sum_probs=31.1

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|...+.|..|+++|.+++||.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           12 PYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            37888899999999999999999999999999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.23  E-value=3.6e-12  Score=67.03  Aligned_cols=34  Identities=26%  Similarity=0.407  Sum_probs=29.3

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|...+.|..|+++|++++||.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             EECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             eECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7888888888888888888888888888888876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.7e-12  Score=67.04  Aligned_cols=35  Identities=26%  Similarity=0.399  Sum_probs=31.1

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|...+.|..|+++|.++++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A           12 PYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            37888899999999999999999999999999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.5e-12  Score=67.10  Aligned_cols=35  Identities=29%  Similarity=0.539  Sum_probs=31.1

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A           12 PYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            37888899999999999999999999999999887

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.23  E-value=4.6e-12  Score=81.43  Aligned_cols=76  Identities=14%  Similarity=0.153  Sum_probs=60.5

Q ss_pred             CcccccccccccC------CHHHHHHHHHHhcCCCCcccccchhhhhhccccccc-----cCceecccccccccChhHHH
Q psy8167          52 DRIPCTLCDKTFT------RKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAF-----IDRIRCELCDKSFTRKDSLK  120 (167)
Q Consensus        52 ~~~~C~~C~~~f~------~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l-----~k~~~C~~C~k~f~~~~~l~  120 (167)
                      +.+.|.+|++.|.      ....|..|+ . |.+++||.|..|++.|.....+..     .++|.|.+||+.|...+.|.
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~-h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~  117 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-A-SKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSAL  117 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-H-HHHHCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-H-hCCCCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHH
Confidence            5577888877665      556676776 4 778899999999999987332221     67899999999999999999


Q ss_pred             HHHHhhcCC
Q psy8167         121 KHNRIFHGG  129 (167)
Q Consensus       121 ~H~~~h~~~  129 (167)
                      .|+++|++.
T Consensus       118 ~H~~~h~~~  126 (129)
T 2wbt_A          118 DHVCKKHNI  126 (129)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHHCCc
Confidence            999999875

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.7e-12  Score=67.06  Aligned_cols=35  Identities=26%  Similarity=0.517  Sum_probs=29.7

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A           12 PYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            36788888888888888888888888888888877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.4e-12  Score=66.72  Aligned_cols=34  Identities=32%  Similarity=0.608  Sum_probs=29.5

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7888888888888888889888888888888876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.23  E-value=4.5e-12  Score=66.67  Aligned_cols=35  Identities=29%  Similarity=0.480  Sum_probs=30.4

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A           12 PYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            37888888999999999999999888889999877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.5e-12  Score=67.14  Aligned_cols=34  Identities=26%  Similarity=0.469  Sum_probs=28.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             BCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             eECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6778888888888888888888888888888876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.5e-12  Score=67.09  Aligned_cols=34  Identities=29%  Similarity=0.534  Sum_probs=28.5

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|...+.|..|+++|.+++||.|.+|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             SEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             eECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6788888888888888888888888888888876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=67.12  Aligned_cols=34  Identities=21%  Similarity=0.343  Sum_probs=30.4

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|...+.|..|+++|.++++|.|..|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A           13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             EEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            7888889999999999999999999999999887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.7e-12  Score=67.01  Aligned_cols=35  Identities=26%  Similarity=0.487  Sum_probs=29.8

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|...+.|..|+++|.+++||.|.+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A           12 PYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            37888888888888888888888888888888877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.7e-12  Score=67.51  Aligned_cols=34  Identities=29%  Similarity=0.506  Sum_probs=28.2

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|+++|.++++|+|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A           13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             ccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            6778888888888888888888888888888876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.4e-12  Score=67.13  Aligned_cols=34  Identities=32%  Similarity=0.568  Sum_probs=26.0

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|+++|+++++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             eECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            5677777777777777777777777777777766

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.22  E-value=3.6e-12  Score=67.06  Aligned_cols=34  Identities=24%  Similarity=0.489  Sum_probs=27.3

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|...+.|..|+++|.++++|.|.+|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A           13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            6777778888888888888888888888888776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.7e-12  Score=66.61  Aligned_cols=35  Identities=29%  Similarity=0.524  Sum_probs=30.8

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A           12 PYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            37888889999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.9e-12  Score=66.95  Aligned_cols=34  Identities=26%  Similarity=0.399  Sum_probs=27.7

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|.+|+++|+++++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            6777788888888888888888888888888776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.6e-12  Score=66.30  Aligned_cols=34  Identities=26%  Similarity=0.502  Sum_probs=29.5

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             eECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7888888888888888888888888888888877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.8e-12  Score=66.26  Aligned_cols=34  Identities=29%  Similarity=0.607  Sum_probs=29.4

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             eeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6788888888888888889888888888888877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=4.1e-12  Score=66.86  Aligned_cols=35  Identities=29%  Similarity=0.525  Sum_probs=30.2

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           12 SHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            37888888889999999999988888888998877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.5e-12  Score=67.13  Aligned_cols=35  Identities=29%  Similarity=0.610  Sum_probs=31.9

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|...+.|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           12 PYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            37899999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-12  Score=66.75  Aligned_cols=34  Identities=21%  Similarity=0.545  Sum_probs=27.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|+++|+++++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             cCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6777778888888888888888888888888776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=66.56  Aligned_cols=35  Identities=23%  Similarity=0.370  Sum_probs=30.5

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|...+.|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A           12 PCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            37888888999999999999999888889999877

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=5.7e-12  Score=66.29  Aligned_cols=35  Identities=23%  Similarity=0.406  Sum_probs=30.7

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A           12 PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            37888889999999999999999888999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.7e-12  Score=67.02  Aligned_cols=35  Identities=23%  Similarity=0.516  Sum_probs=31.6

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           12 PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            37888999999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5e-12  Score=66.51  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=30.9

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A           12 PYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            37888889999999999999999999999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=6e-12  Score=66.19  Aligned_cols=35  Identities=20%  Similarity=0.331  Sum_probs=30.6

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+||+.|.....|..|+++|.++++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           12 SHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            37888888999999999999999988999999877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.6e-12  Score=66.63  Aligned_cols=34  Identities=29%  Similarity=0.456  Sum_probs=26.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|+++|.+++||.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           13 HECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             eeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5677777777777777778777777777777766

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.21  E-value=6.8e-12  Score=66.01  Aligned_cols=35  Identities=26%  Similarity=0.414  Sum_probs=30.8

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A           12 PYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            37888889999999999999999999999999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-12  Score=66.75  Aligned_cols=35  Identities=23%  Similarity=0.470  Sum_probs=29.9

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A           12 PYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            37888888888888888889888888888888877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.2e-12  Score=66.80  Aligned_cols=34  Identities=26%  Similarity=0.584  Sum_probs=26.0

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             cCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5677777777777777777777777777777766

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.7e-12  Score=66.31  Aligned_cols=36  Identities=22%  Similarity=0.415  Sum_probs=32.4

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      ++|.|.+||+.|.....|..|+++|.++++|.|.+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A           11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            347899999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=5.3e-12  Score=66.37  Aligned_cols=35  Identities=23%  Similarity=0.419  Sum_probs=29.3

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+|++.|.....|..|+++|.++++|+|..|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A           12 SHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            37788888888888888888888888888888876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.7e-12  Score=66.66  Aligned_cols=35  Identities=23%  Similarity=0.442  Sum_probs=29.5

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           12 PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            36788888888888888888888888888888877

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.4e-12  Score=65.84  Aligned_cols=34  Identities=29%  Similarity=0.547  Sum_probs=26.9

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|+++|.+++||.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6777788888888888888888888888888764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.9e-11  Score=64.92  Aligned_cols=44  Identities=18%  Similarity=0.380  Sum_probs=38.8

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhh
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEV   90 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~   90 (167)
                      ..+.++++|.|.+|++.|.....|..|+ ++|.++++|.|.+|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHK-LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHG-GGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHH-HhcCCCCCccCCCCCC
Confidence            3466678999999999999999999999 8899999988888864

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.2e-11  Score=65.05  Aligned_cols=35  Identities=26%  Similarity=0.465  Sum_probs=29.4

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      +|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A           12 PFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            37888888888888888888888888888888765

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=1.6e-11  Score=64.20  Aligned_cols=38  Identities=24%  Similarity=0.396  Sum_probs=34.6

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchh
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQ  138 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~  138 (167)
                      +++|.|.+|++.|.....|..|+++|+++++|.|++||
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            34588999999999999999999999999999999996

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=65.47  Aligned_cols=34  Identities=26%  Similarity=0.424  Sum_probs=27.2

Q ss_pred             eecccccccccChhHHHHHHH-hhcCCCCCCCCch
Q psy8167         104 IRCELCDKSFTRKDSLKKHNR-IFHGGADPKLMDE  137 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~C  137 (167)
                      |.|.+||+.|.....|..|++ +|.++++|.|.+|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             BCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             EECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            677778888888888888888 7888888888776

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5e-11  Score=62.57  Aligned_cols=44  Identities=25%  Similarity=0.333  Sum_probs=39.5

Q ss_pred             ccCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          44 SVGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        44 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      +...+.++++|.|..|++.|.....|..|+ +.|.++++|.|..|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHH-TTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            345678889999999999999999999999 78999999988876

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.3e-11  Score=62.83  Aligned_cols=37  Identities=30%  Similarity=0.507  Sum_probs=32.8

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      .++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3458899999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8.2e-11  Score=61.74  Aligned_cols=43  Identities=21%  Similarity=0.292  Sum_probs=38.7

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ +.|.+++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            4 GSSGAGEKPYGCSECGKAFSSKSYLIIHM-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSCBCSSSCCBCSCHHHHHHHH-TTTCCSCSSCCCCC
T ss_pred             CcCcCCCCCcCCCccChhhCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            34577889999999999999999999999 78999999988876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.12  E-value=7.4e-11  Score=61.92  Aligned_cols=43  Identities=23%  Similarity=0.392  Sum_probs=38.8

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQ-RMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            44577889999999999999999999999 88999999988876

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.1e-11  Score=63.43  Aligned_cols=33  Identities=30%  Similarity=0.436  Sum_probs=25.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      |.|.+|++.|.....|..|+++|.++++|+|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A           13 YECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             cCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            677777777777777777777777777777763

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.11  E-value=3.4e-11  Score=63.26  Aligned_cols=33  Identities=30%  Similarity=0.541  Sum_probs=24.7

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A           13 FECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             EECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            677777777777777777777777777777763

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.11  E-value=3.7e-11  Score=61.77  Aligned_cols=32  Identities=38%  Similarity=0.686  Sum_probs=20.6

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+||+.|...+.|..|+++|.++++|.|+
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A           11 YECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             ccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            56666666666666666666666666666663

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1e-10  Score=61.30  Aligned_cols=43  Identities=21%  Similarity=0.295  Sum_probs=38.7

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A            4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHR-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCSBCCTTTCCCBSSHHHHHHHH-TTTTTCCCCSSCCC
T ss_pred             CCCcCCCCCeECCCCCceeCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34577889999999999999999999999 78999999998876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8.8e-11  Score=61.63  Aligned_cols=43  Identities=16%  Similarity=0.189  Sum_probs=38.6

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ ++|.+++||.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A            4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQ-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSCCCCCSSCBCSSSCCBCSSHHHHHHHG-GGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCeeCcccCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            34577889999999999999999999999 78999999988876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.1e-10  Score=61.21  Aligned_cols=43  Identities=16%  Similarity=0.186  Sum_probs=38.6

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ +.|.++++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQ-RSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            34577889999999999999999999999 77999999998876

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.4e-11  Score=62.80  Aligned_cols=32  Identities=31%  Similarity=0.589  Sum_probs=22.8

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+||+.|.....|..|+++|.++++|+|.
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A           13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            56677777777777777777777777777775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.8e-11  Score=63.07  Aligned_cols=32  Identities=34%  Similarity=0.603  Sum_probs=22.7

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A           13 YECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             eECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56667777777777777777777777777775

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.10  E-value=2.9e-11  Score=62.18  Aligned_cols=40  Identities=13%  Similarity=-0.119  Sum_probs=37.0

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      |+++|.++++|.|.+|++.|.....|.+|++.|.+++|..
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            6788999999999999999999999999999999988754

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=7.9e-11  Score=61.51  Aligned_cols=43  Identities=19%  Similarity=0.290  Sum_probs=38.5

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchh
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIE   89 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~   89 (167)
                      ..+.++++|.|..|++.|.....|..|+ ++|.++++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHH-HHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHH-HHccCCCCCCCcCCC
Confidence            3567789999999999999999999999 779999999888875

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.5e-11  Score=62.75  Aligned_cols=33  Identities=27%  Similarity=0.591  Sum_probs=25.2

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A           13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            677777777777777777877777777777763

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.4e-10  Score=60.81  Aligned_cols=42  Identities=24%  Similarity=0.366  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHH-HHCCSSSCCCCCCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHH-HhcCCCCCCCCCCC
Confidence            4577889999999999999999999999 77999999988876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=9.1e-11  Score=61.53  Aligned_cols=43  Identities=21%  Similarity=0.295  Sum_probs=38.5

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ ++|.+++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A            4 GSSGTGEKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCSEECSSSCCEESCHHHHHHHG-GGGTTCCCSSTTCC
T ss_pred             CCCCCCCcCccCCCccchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34567789999999999999999999999 78999999998876

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.1e-11  Score=61.56  Aligned_cols=39  Identities=5%  Similarity=-0.198  Sum_probs=27.5

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |+++|.++++|.|.+|++.|.....|.+|++.|.+++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGP   39 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            456667777777777777777777777777777766654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7.3e-11  Score=61.95  Aligned_cols=43  Identities=19%  Similarity=0.185  Sum_probs=38.6

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ +.|.++++|.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQ-RVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHH-HHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            34577889999999999999999999999 77999999988876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.09  E-value=9.3e-11  Score=61.52  Aligned_cols=43  Identities=23%  Similarity=0.376  Sum_probs=38.5

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ ++|.++++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHH-KLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHH-HHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34577889999999999999999999999 77999999998876

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.4e-11  Score=62.74  Aligned_cols=33  Identities=24%  Similarity=0.472  Sum_probs=24.5

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A           13 YKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             EECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             eeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            677777777777777777777777777777753

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.3e-11  Score=62.49  Aligned_cols=44  Identities=25%  Similarity=0.349  Sum_probs=39.0

Q ss_pred             ccCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          44 SVGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        44 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      +...+.++++|.|..|++.|.....|..|+ ++|.++++|.|..|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHW-ITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHH-THHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            344577889999999999999999999999 77999999988876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.4e-11  Score=63.27  Aligned_cols=36  Identities=19%  Similarity=0.260  Sum_probs=31.6

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      ++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           11 KPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            447888899999999999999999999999999887

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.8e-11  Score=62.60  Aligned_cols=33  Identities=30%  Similarity=0.591  Sum_probs=26.4

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      |.|.+|++.|.....|..|+++|.+++||.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A           13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             ccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            677778888888888888888888888888864

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.09  E-value=1.9e-11  Score=66.58  Aligned_cols=52  Identities=17%  Similarity=0.248  Sum_probs=44.9

Q ss_pred             ccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhhcCCCCCC
Q psy8167          60 DKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPK  133 (167)
Q Consensus        60 ~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~  133 (167)
                      ++.|.....|..|+ .+|.++++                     |.|.+||+.|...+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~-~~H~~~k~---------------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPR-SRSQSEQP---------------------ATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCH-HHHTSSCC---------------------EECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHH-HhcCCCCC---------------------ccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            46777888888898 77888776                     789999999999999999999999998874

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.4e-11  Score=61.54  Aligned_cols=43  Identities=21%  Similarity=0.282  Sum_probs=38.4

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ +.|.++++|.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQ-RLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHH-HHHHSCCCCCCCCC
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34577789999999999999999999999 77999999988876

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.9e-11  Score=62.56  Aligned_cols=33  Identities=33%  Similarity=0.584  Sum_probs=23.7

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      |.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A           13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             EECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            667777777777777777777777777777753

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-10  Score=60.93  Aligned_cols=42  Identities=21%  Similarity=0.379  Sum_probs=38.1

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHH-TTTTTCSCCCSCCC
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            4567789999999999999999999999 78999999988876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-10  Score=61.06  Aligned_cols=42  Identities=21%  Similarity=0.347  Sum_probs=38.1

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ++|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHH-TTTCCCCCCSCCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHH-hhcCCCCCCCCCCC
Confidence            4567789999999999999999999999 78999999998876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.1e-10  Score=61.30  Aligned_cols=42  Identities=31%  Similarity=0.449  Sum_probs=38.1

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ++|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHG-GGTSCSSCSCCCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4567789999999999999999999999 78999999998876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.4e-10  Score=60.81  Aligned_cols=42  Identities=24%  Similarity=0.369  Sum_probs=38.1

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHG-GGTSCCCCCSCCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHh-hhcCCCCCCCCCCC
Confidence            3567789999999999999999999999 88999999998876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.08  E-value=1.5e-10  Score=60.69  Aligned_cols=42  Identities=21%  Similarity=0.340  Sum_probs=37.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHH-HHHSSCCCSSCCCC
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3567789999999999999999999999 77999999998876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-10  Score=60.85  Aligned_cols=42  Identities=21%  Similarity=0.320  Sum_probs=38.1

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHH-HHHSCCCTTSSSCC
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4567789999999999999999999999 77999999999876

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5e-11  Score=62.53  Aligned_cols=33  Identities=27%  Similarity=0.509  Sum_probs=22.9

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      |.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A           13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566667777777777777777777777777653

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.1e-10  Score=61.19  Aligned_cols=43  Identities=21%  Similarity=0.259  Sum_probs=38.6

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            4 GSSGTGEKPYKCEKCGKGYNSKFNLDMHQ-KVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESCHHHHHHHH-TTSCSCCSSCCSCC
T ss_pred             CcCCCCCCCeECCCCCCccCCHHHHHHHH-HhhCCCCCCCCCCC
Confidence            34577889999999999999999999999 78999999988876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.4e-10  Score=60.81  Aligned_cols=42  Identities=24%  Similarity=0.363  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHR-RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHH-HHHTCCCSSCSSCC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHH-HHcCCCCCCCCCCC
Confidence            4567789999999999999999999999 77999999998876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.8e-10  Score=60.39  Aligned_cols=42  Identities=21%  Similarity=0.471  Sum_probs=37.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHS-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHH-HHTTCCCSSSCCCC
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3567789999999999999999999999 77999999998876

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.5e-11  Score=62.76  Aligned_cols=32  Identities=28%  Similarity=0.539  Sum_probs=17.8

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.+++||.|.
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A           13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             eECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            45555555555555555555555555555554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.7e-10  Score=60.44  Aligned_cols=42  Identities=24%  Similarity=0.346  Sum_probs=38.1

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQ-RIHTGVKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHH-GGGSCCCSCSSCCC
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3567789999999999999999999999 88999999998876

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.8e-11  Score=62.65  Aligned_cols=32  Identities=31%  Similarity=0.505  Sum_probs=19.5

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A           13 FICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             EECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45555666666666666666666666666664

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.8e-11  Score=62.65  Aligned_cols=41  Identities=12%  Similarity=-0.020  Sum_probs=29.1

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36666777777777777777777777777777777666643

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.1e-11  Score=62.50  Aligned_cols=32  Identities=34%  Similarity=0.581  Sum_probs=18.4

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.+++||.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A           13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             SCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45555555555555555555555555555554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1.1e-10  Score=60.54  Aligned_cols=41  Identities=22%  Similarity=0.355  Sum_probs=37.3

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      .+.++++|.|..|++.|.....|..|+ ..|.++++|.|..|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQ-QTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHH-HHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            467789999999999999999999999 77999999988876

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.5e-11  Score=61.07  Aligned_cols=33  Identities=18%  Similarity=0.474  Sum_probs=30.7

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      +|.|.+|++.|...+.|..|+++|.++++|.|.
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A           10 PYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            378999999999999999999999999999985

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.9e-11  Score=62.60  Aligned_cols=34  Identities=24%  Similarity=0.562  Sum_probs=31.5

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      +|.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A           12 PYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3789999999999999999999999999999974

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.6e-10  Score=60.53  Aligned_cols=42  Identities=21%  Similarity=0.418  Sum_probs=38.1

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQ-RIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHH-GGGSSCCCSCSSCC
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHH-HHhcCCCCCCCCCC
Confidence            4567789999999999999999999999 78999999988876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.8e-10  Score=60.34  Aligned_cols=42  Identities=21%  Similarity=0.284  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHH-TTTTTSCCSCCCCC
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3567789999999999999999999999 78999999988876

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.9e-11  Score=62.43  Aligned_cols=41  Identities=12%  Similarity=-0.170  Sum_probs=32.9

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      .|+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            36777888888888888888888888888888888777654

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-10  Score=60.72  Aligned_cols=42  Identities=26%  Similarity=0.459  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQ-QIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHH-HTTSSCCSCCSCCC
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3567789999999999999999999999 78999999988876

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.1e-11  Score=62.26  Aligned_cols=32  Identities=31%  Similarity=0.632  Sum_probs=19.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.++++|+|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A           13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             BCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            45555566666666666666666566666654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.3e-11  Score=62.80  Aligned_cols=42  Identities=10%  Similarity=-0.122  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            478899999999999999999999999999999999887654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.07  E-value=1.5e-10  Score=60.66  Aligned_cols=42  Identities=21%  Similarity=0.343  Sum_probs=38.1

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQ-NVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHG-GGGSSSSCSCSSCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHH-HHcCCCCCcCCCCC
Confidence            4567789999999999999999999999 78999999988876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=60.98  Aligned_cols=43  Identities=26%  Similarity=0.308  Sum_probs=38.5

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQ-RTHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHH-HHHSSCCCSSSCCC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHH-HHcCCCCCCCCCCC
Confidence            34577889999999999999999999999 77999999998876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-10  Score=60.73  Aligned_cols=42  Identities=24%  Similarity=0.337  Sum_probs=37.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQ-RTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHH-HHHTTSCCSCSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4567789999999999999999999999 77999999988876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=60.92  Aligned_cols=42  Identities=24%  Similarity=0.424  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQ-LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHH-TTTCCCCCSCCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3567789999999999999999999999 78999999998876

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.8e-11  Score=62.27  Aligned_cols=32  Identities=34%  Similarity=0.642  Sum_probs=22.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A           13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            56666667777777777777776666677665

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=2.8e-11  Score=62.94  Aligned_cols=39  Identities=8%  Similarity=-0.118  Sum_probs=27.6

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP   41 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSS
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCC
Confidence            566667777777777777777777777777777766654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.06  E-value=1.5e-10  Score=60.59  Aligned_cols=42  Identities=26%  Similarity=0.339  Sum_probs=38.2

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHG-GGSSSCCCSCCTTC
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3567789999999999999999999999 88999999998876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.06  E-value=1.5e-10  Score=60.62  Aligned_cols=42  Identities=26%  Similarity=0.447  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHH-TGGGCCCCCSSSCC
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3567789999999999999999999999 78999999998876

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.4e-11  Score=62.17  Aligned_cols=32  Identities=22%  Similarity=0.425  Sum_probs=22.8

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|+++++|.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A           13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             eECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56666777777777777777777777777775

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.2e-11  Score=62.53  Aligned_cols=42  Identities=7%  Similarity=-0.108  Sum_probs=38.5

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            488899999999999999999999999999999999887654

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.5e-10  Score=60.69  Aligned_cols=42  Identities=24%  Similarity=0.367  Sum_probs=37.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHW-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHH-HHHSSSSCSSCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHH-HHHCCCCCCCCCCC
Confidence            3567789999999999999999999999 77999999999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.7e-10  Score=60.47  Aligned_cols=42  Identities=26%  Similarity=0.379  Sum_probs=37.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTKQKPSGPSSG   46 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHH-HHTSCCCCSSCSCC
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3567789999999999999999999999 77999999998875

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.8e-11  Score=62.32  Aligned_cols=41  Identities=12%  Similarity=-0.091  Sum_probs=30.2

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSS
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            36677777777777777777777777777777777766643

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.1e-11  Score=62.52  Aligned_cols=40  Identities=10%  Similarity=-0.092  Sum_probs=29.2

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            6667777777777777777777777777777777766643

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.5e-11  Score=62.35  Aligned_cols=42  Identities=12%  Similarity=-0.094  Sum_probs=38.5

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            488899999999999999999999999999999999887643

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.4e-10  Score=60.78  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHH-TTTSCSCCSSCCCC
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3567789999999999999999999999 88999999998876

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.6e-11  Score=62.11  Aligned_cols=40  Identities=5%  Similarity=-0.163  Sum_probs=27.7

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      |+++|.++++|.|.+|++.|.....|.+|++.|.+++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5666667777777777777777777777777776666543

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.9e-11  Score=62.61  Aligned_cols=34  Identities=26%  Similarity=0.516  Sum_probs=31.4

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      +|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A           12 PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             TTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            3789999999999999999999999999999974

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.1e-10  Score=60.29  Aligned_cols=43  Identities=23%  Similarity=0.363  Sum_probs=38.5

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHH-hcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRI-FHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ + .|.+++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHW-RYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHH-TTTTTTSCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHh-HhhcCCCCCCCCCCC
Confidence            34577889999999999999999999999 6 8999999998876

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.9e-11  Score=62.19  Aligned_cols=39  Identities=13%  Similarity=-0.046  Sum_probs=31.5

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++|.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            677778888888888888888888888888888777764

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.06  E-value=1.6e-10  Score=60.49  Aligned_cols=42  Identities=21%  Similarity=0.314  Sum_probs=38.2

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHG-GGGTSCCCCSTTCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            4577889999999999999999999999 78999999988876

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.9e-11  Score=62.30  Aligned_cols=32  Identities=25%  Similarity=0.661  Sum_probs=18.6

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.+++||.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A           13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45555555555566666665555555555554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.2e-10  Score=59.95  Aligned_cols=42  Identities=24%  Similarity=0.296  Sum_probs=37.7

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHH-HHHSCCSSCCSCCC
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3567789999999999999999999999 78999999988876

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.4e-11  Score=60.99  Aligned_cols=31  Identities=32%  Similarity=0.665  Sum_probs=18.2

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A           13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             eECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4555555556666666666665555555555

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.5e-11  Score=61.73  Aligned_cols=41  Identities=12%  Similarity=-0.101  Sum_probs=32.4

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            36777788888888888888888888888888887777643

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.9e-10  Score=60.29  Aligned_cols=42  Identities=17%  Similarity=0.218  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQ-VLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHH-HHHSCCSCCCTTCC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4567789999999999999999999999 77999999988876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.9e-10  Score=60.22  Aligned_cols=42  Identities=21%  Similarity=0.314  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHH-GGGCCCSCCSSCCC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3567789999999999999999999999 88999999988876

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.9e-11  Score=62.27  Aligned_cols=34  Identities=24%  Similarity=0.472  Sum_probs=31.4

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      +|.|.+|++.|.....|..|+++|.++++|.|..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A           12 PYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3789999999999999999999999999999974

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.6e-10  Score=60.61  Aligned_cols=42  Identities=24%  Similarity=0.409  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQ-VIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHH-HHHHCCSCCSCCCC
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4567789999999999999999999999 77999999998876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.1e-10  Score=60.06  Aligned_cols=42  Identities=21%  Similarity=0.242  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQ-RTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHH-HHCCSCCCSCCCCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3567789999999999999999999999 77999999988876

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.5e-11  Score=63.21  Aligned_cols=42  Identities=10%  Similarity=-0.192  Sum_probs=38.5

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|+++|.++++|.|.+|++.|.....|..|++.|++++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            488899999999999999999999999999999999887654

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=60.69  Aligned_cols=42  Identities=29%  Similarity=0.422  Sum_probs=37.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHH-HHHHCSSCSSSCCC
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3567789999999999999999999999 77999999988876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=2.3e-10  Score=59.95  Aligned_cols=42  Identities=17%  Similarity=0.184  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHH-TTTCCSCSSCCSCC
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3567789999999999999999999999 88999999988876

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.2e-11  Score=61.54  Aligned_cols=38  Identities=8%  Similarity=-0.128  Sum_probs=19.4

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG   40 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            44445555555555555555555555555555544443

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=6.5e-11  Score=60.87  Aligned_cols=39  Identities=10%  Similarity=-0.135  Sum_probs=30.2

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++|.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            566777778888888888888888888888887776653

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8.5e-11  Score=61.69  Aligned_cols=32  Identities=31%  Similarity=0.559  Sum_probs=21.9

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A           13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             EECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            56666666777777777777776666666665

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=62.77  Aligned_cols=42  Identities=10%  Similarity=-0.088  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .|+++|.++++|.|.+|++.|.....|..|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999887543

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.4e-10  Score=60.83  Aligned_cols=42  Identities=19%  Similarity=0.269  Sum_probs=37.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHL-KRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHH-HHHHSTTSSCCSCC
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            3577789999999999999999999999 77999999988876

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1e-10  Score=60.74  Aligned_cols=33  Identities=27%  Similarity=0.600  Sum_probs=30.8

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      +|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A           12 PFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             SEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            378999999999999999999999999999995

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.3e-11  Score=61.94  Aligned_cols=42  Identities=10%  Similarity=-0.124  Sum_probs=38.3

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999999887543

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.7e-10  Score=59.73  Aligned_cols=43  Identities=21%  Similarity=0.320  Sum_probs=38.1

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|..|++.|.....|..|+ .+|.++++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~~   46 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAFRQNIHLASHL-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHH-HHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCEECCcCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34577889999999999999999999999 77999999988764

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.4e-11  Score=61.48  Aligned_cols=35  Identities=31%  Similarity=0.562  Sum_probs=33.2

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      +++|.|.+||+.|.....|..|+++|.++++|+|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A           10 ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999995

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.5e-11  Score=61.86  Aligned_cols=42  Identities=10%  Similarity=-0.101  Sum_probs=38.3

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            478899999999999999999999999999999999887543

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.2e-10  Score=60.44  Aligned_cols=31  Identities=19%  Similarity=0.523  Sum_probs=18.7

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      |.|.+||+.|.....|..|+++|.++++|.|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A           13 YECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             EECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            4555556666666666666666666666655

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=8.6e-11  Score=61.66  Aligned_cols=32  Identities=25%  Similarity=0.509  Sum_probs=23.3

Q ss_pred             eecccccccccChhHHHHHHHhhcC-CCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHG-GADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~-~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.+ +++|.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A           13 FKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             EECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6677777777777777777777777 7777775

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1e-10  Score=61.31  Aligned_cols=42  Identities=7%  Similarity=-0.159  Sum_probs=38.2

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999887543

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.9e-10  Score=60.27  Aligned_cols=42  Identities=24%  Similarity=0.368  Sum_probs=38.1

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.+++||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHG-GGGSCCCCSCCCCC
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3567789999999999999999999999 88999999998876

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.2e-11  Score=62.53  Aligned_cols=42  Identities=12%  Similarity=-0.113  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            488899999999999999999999999999999999887543

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.4e-11  Score=61.21  Aligned_cols=33  Identities=30%  Similarity=0.500  Sum_probs=30.7

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A           12 PYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            378999999999999999999999999999995

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.5e-11  Score=61.71  Aligned_cols=41  Identities=15%  Similarity=-0.081  Sum_probs=37.7

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            48889999999999999999999999999999999888753

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.4e-11  Score=60.59  Aligned_cols=32  Identities=34%  Similarity=0.634  Sum_probs=30.0

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      +|.|.+||+.|...+.|..|+++|.++++|.|
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A           11 PYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             SBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            37899999999999999999999999999988

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=6e-11  Score=62.27  Aligned_cols=42  Identities=10%  Similarity=-0.066  Sum_probs=38.5

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            478899999999999999999999999999999999888654

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.3e-11  Score=62.13  Aligned_cols=42  Identities=14%  Similarity=-0.031  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .|+++|.++++|.|.+|++.|.....|..|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999887643

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.2e-11  Score=62.17  Aligned_cols=42  Identities=7%  Similarity=-0.163  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            478899999999999999999999999999999999887643

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.7e-11  Score=61.48  Aligned_cols=39  Identities=13%  Similarity=-0.106  Sum_probs=23.2

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |+++|.++++|.|.+|++.|.....|.+|++.|.+++|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPS   41 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCC
Confidence            455555666666666666666666666666666555543

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.9e-11  Score=62.24  Aligned_cols=42  Identities=12%  Similarity=-0.033  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999999887543

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.8e-11  Score=60.32  Aligned_cols=31  Identities=26%  Similarity=0.511  Sum_probs=19.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|
T Consensus        12 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A           12 YKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             EECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             EeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            5566666666666666666666666666655

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=8.9e-11  Score=58.55  Aligned_cols=36  Identities=3%  Similarity=-0.095  Sum_probs=31.4

Q ss_pred             HhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         124 RIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       124 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      ++|.++++|.|..|++.|.....|..|++.|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467888999999999999999999999999988765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.02  E-value=1.3e-10  Score=57.87  Aligned_cols=36  Identities=14%  Similarity=-0.085  Sum_probs=33.1

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      |+++|.++++|.|..|++.|.....|..|++.|.++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            788899999999999999999999999999998763

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6e-11  Score=62.24  Aligned_cols=42  Identities=10%  Similarity=-0.108  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            488899999999999999999999999999999999887643

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.2e-11  Score=61.54  Aligned_cols=39  Identities=13%  Similarity=-0.075  Sum_probs=22.8

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCC
Confidence            455555556666666666666666666666665555543

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.02  E-value=1.3e-10  Score=59.57  Aligned_cols=31  Identities=32%  Similarity=0.485  Sum_probs=16.8

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      |.|.+||+.|...+.|..|+++|.+++||.|
T Consensus        12 ~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A           12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             eECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            4555555555555555555555555555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.01  E-value=8.8e-12  Score=69.99  Aligned_cols=42  Identities=10%  Similarity=0.114  Sum_probs=35.7

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHH
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFL  147 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  147 (167)
                      +|.|++||+.|.....|.   ++|.++++|.|.+|++.|....++
T Consensus        14 ~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A           14 SFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             EEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             CccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            378889999999888876   788999999999999999876543

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.9e-11  Score=61.97  Aligned_cols=42  Identities=10%  Similarity=-0.115  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      +|+++|.++++|.|.+|++.|.....|.+|++.|.+++|...
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            488899999999999999999999999999999999887643

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.01  E-value=2.9e-10  Score=58.75  Aligned_cols=35  Identities=26%  Similarity=0.413  Sum_probs=28.1

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      ++|.|.+|++.|.....|..|+++|+++++|.|.+
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            34778888888888888888888888888888864

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=3.4e-10  Score=59.29  Aligned_cols=42  Identities=24%  Similarity=0.357  Sum_probs=37.7

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHH-TTTTTSCCCCTTCC
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3567789999999999999999999999 78999999988764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.4e-11  Score=61.63  Aligned_cols=40  Identities=10%  Similarity=-0.115  Sum_probs=28.2

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG   42 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            6666677777777777777777777777777777666543

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.7e-11  Score=61.85  Aligned_cols=32  Identities=25%  Similarity=0.508  Sum_probs=21.6

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A           13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56666666666666777777666666666665

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=9.9e-11  Score=60.15  Aligned_cols=33  Identities=30%  Similarity=0.572  Sum_probs=30.5

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      ++|.|.+|++.|...+.|..|+++|.++++|+|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A           10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            347899999999999999999999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=60.76  Aligned_cols=42  Identities=19%  Similarity=0.343  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            5 SSGTGEKPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3567789999999999999999999999 88999999998876

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.1e-10  Score=61.24  Aligned_cols=34  Identities=26%  Similarity=0.509  Sum_probs=31.4

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      +|.|.+||+.|.....|..|+++|.++++|.|..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A           12 PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             SSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3789999999999999999999999999999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.01  E-value=8.9e-11  Score=60.26  Aligned_cols=39  Identities=10%  Similarity=-0.101  Sum_probs=36.4

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++|.
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            678889999999999999999999999999999998874

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.6e-10  Score=60.53  Aligned_cols=42  Identities=24%  Similarity=0.370  Sum_probs=38.0

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHR-RVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHT-HHHHSCCCSCSCCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3567789999999999999999999999 77999999988876

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=9.4e-11  Score=60.88  Aligned_cols=41  Identities=10%  Similarity=-0.142  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      .|+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            48889999999999999999999999999999999988754

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=5.4e-10  Score=58.54  Aligned_cols=42  Identities=19%  Similarity=0.265  Sum_probs=37.3

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccc
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV   87 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~   87 (167)
                      ...+.++++|.|..|++.|.....|..|+ ++|.+++||.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHR-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHH-HHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHH-HHhCCCCCCCCCC
Confidence            44577889999999999999999999999 7799999998864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.3e-10  Score=59.36  Aligned_cols=35  Identities=26%  Similarity=0.438  Sum_probs=25.9

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      ++|.|.+|++.|.....|..|+++|+++++|+|.+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A           11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            34677777777777777777877777777777753

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=60.79  Aligned_cols=38  Identities=11%  Similarity=-0.121  Sum_probs=20.0

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      |+++|.++++|.|.+|++.|.....|.+|++.|.+++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP   40 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC
Confidence            34445555555555555555555555555555555444

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=60.27  Aligned_cols=31  Identities=32%  Similarity=0.613  Sum_probs=22.2

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      |.|.+||+.|.....|..|+++|.++++|.|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A           13 YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             EEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             eECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            5666777777777777777777777777766

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5.6e-11  Score=61.10  Aligned_cols=39  Identities=10%  Similarity=-0.113  Sum_probs=36.4

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |+++|.++++|.|..|++.|.....|..|++.|.+++|.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            678899999999999999999999999999999988874

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.2e-10  Score=61.03  Aligned_cols=32  Identities=25%  Similarity=0.336  Sum_probs=24.2

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      |.|.+|++.|.....|..|+++|.++++|.|.
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A           13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             EECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             eeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67777777777777777777777777777775

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4.8e-10  Score=58.44  Aligned_cols=41  Identities=24%  Similarity=0.370  Sum_probs=36.9

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCccccc
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTN   86 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~   86 (167)
                      ...+.++++|.|..|++.|.....|..|+ ++|.++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQ-RIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHH-TTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHH-HHhCCCCCCCCC
Confidence            34577889999999999999999999999 889999999885

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.5e-10  Score=58.97  Aligned_cols=34  Identities=32%  Similarity=0.545  Sum_probs=26.7

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      ++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A           11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             cCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4477778888888888888888888888888876

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.6e-10  Score=59.20  Aligned_cols=33  Identities=30%  Similarity=0.482  Sum_probs=30.6

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKLM  135 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~  135 (167)
                      +|.|.+|++.|...+.|..|+++|+++++|.|.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A           12 PYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            489999999999999999999999999999874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5.6e-10  Score=58.47  Aligned_cols=42  Identities=19%  Similarity=0.345  Sum_probs=37.5

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccc
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV   87 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~   87 (167)
                      ...+.++++|.|..|++.|.....|..|+ .+|.++++|.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHH-SVHSGERPSGPSS   45 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHT-TTTTSCCSCTTSC
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHH-HhcCCCCCCCCCC
Confidence            34577889999999999999999999999 7899999998864

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.97  E-value=6.4e-10  Score=57.40  Aligned_cols=40  Identities=20%  Similarity=0.329  Sum_probs=36.1

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccc
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV   87 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~   87 (167)
                      .+.++++|.|..|++.|.....|..|+ .+|.+++||.|.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHT-LQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHH-HHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHH-HhhCCCCCccCCC
Confidence            467788999999999999999999999 7799999998863

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7e-11  Score=62.01  Aligned_cols=41  Identities=12%  Similarity=-0.034  Sum_probs=37.6

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG   42 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999887754

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.3e-10  Score=59.35  Aligned_cols=39  Identities=3%  Similarity=-0.204  Sum_probs=24.0

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGP   41 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCC
Confidence            455556666666666666666666666666666655553

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=5e-10  Score=57.12  Aligned_cols=32  Identities=38%  Similarity=0.615  Sum_probs=22.1

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      +|.|.+|++.|.....|..|+++|++++||.|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A           10 VYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            36666677777777777777777777766665

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=9.1e-12  Score=71.83  Aligned_cols=55  Identities=13%  Similarity=0.175  Sum_probs=49.9

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .++|.|.+||+.|.....|..       +++|.|..|++.|.....|..|++.|++++|...
T Consensus        16 ~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A           16 DRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             CCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            678999999999999988875       7899999999999999999999999998887543

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.8e-10  Score=59.17  Aligned_cols=36  Identities=25%  Similarity=0.430  Sum_probs=31.6

Q ss_pred             Cceecc--cccccccChhHHHHHHHhhcCCCCCCCCch
Q psy8167         102 DRIRCE--LCDKSFTRKDSLKKHNRIFHGGADPKLMDE  137 (167)
Q Consensus       102 k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C  137 (167)
                      ++|.|.  .|++.|.....|..|+++|.++++|+|.+|
T Consensus        11 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           11 KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            447887  899999999999999999999999999887

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1e-10  Score=61.27  Aligned_cols=42  Identities=10%  Similarity=-0.138  Sum_probs=38.2

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCccc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVSI  162 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  162 (167)
                      .|+++|.++++|.|.+|++.|.....|..|++.|.+++|...
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            488899999999999999999999999999999998887543

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=8.9e-10  Score=57.65  Aligned_cols=42  Identities=29%  Similarity=0.409  Sum_probs=37.3

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccc
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV   87 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~   87 (167)
                      ...+.++++|.|..|++.|.....|..|+ .+|.+++||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHH-HHHTSSCCCSCCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            34577889999999999999999999999 7799999998864

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=8.1e-10  Score=58.28  Aligned_cols=43  Identities=23%  Similarity=0.307  Sum_probs=38.3

Q ss_pred             cCccCCCCccccc--ccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          45 VGPVVPIDRIPCT--LCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        45 ~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ...+.++++|.|.  .|++.|.....|..|+ ++|.+++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHR-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHH-TTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3457778999998  8999999999999999 88999999998876

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.95  E-value=8.2e-10  Score=57.80  Aligned_cols=41  Identities=22%  Similarity=0.395  Sum_probs=36.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccc
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV   87 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~   87 (167)
                      ..+.++++|.|..|++.|.....|..|+ ++|.+++||.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHH-HHHTTSCSSSSCC
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            4577789999999999999999999999 7799999998864

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.1e-11  Score=61.60  Aligned_cols=41  Identities=7%  Similarity=-0.231  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      .|+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999888754

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.4e-11  Score=62.43  Aligned_cols=41  Identities=12%  Similarity=-0.050  Sum_probs=37.7

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCcc
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPVS  161 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  161 (167)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            48889999999999999999999999999999998887754

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=8.1e-10  Score=57.81  Aligned_cols=42  Identities=21%  Similarity=0.405  Sum_probs=37.2

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccc
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV   87 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~   87 (167)
                      ...+.++++|.|..|++.|.....|..|+ ++|.++++|.|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQ-RVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHG-GGSCCSCCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            34577789999999999999999999999 7899999998863

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.94  E-value=3.8e-10  Score=55.38  Aligned_cols=34  Identities=12%  Similarity=-0.184  Sum_probs=26.7

Q ss_pred             hcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         126 FHGGADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       126 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      |.++++|.|.+|++.|.....|..|++.|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5677788888888888888888888888877654

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.6e-09  Score=56.67  Aligned_cols=40  Identities=23%  Similarity=0.340  Sum_probs=36.3

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCccccc
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTN   86 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~   86 (167)
                      ..+.++++|.|..|++.|.....|..|+ ++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHK-RVHTGERSSGPS   44 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHH-HHCSSCCSCSTT
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            4577789999999999999999999999 779999999886

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.1e-09  Score=55.85  Aligned_cols=38  Identities=29%  Similarity=0.405  Sum_probs=34.9

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccc
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHT   85 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c   85 (167)
                      .+.++++|.|..|++.|.....|..|+ .+|.+++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHE-RIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHG-GGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHH-HHhCCCCCcCC
Confidence            467789999999999999999999999 88999999877

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.5e-09  Score=56.20  Aligned_cols=41  Identities=17%  Similarity=0.276  Sum_probs=36.3

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCccccc
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTN   86 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~   86 (167)
                      ...+.++++|.|..|++.|.....|..|+ ++|.++++|.|.
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQ-ALHAGESGPSSG   44 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHH-HHHTTSCCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHH-HHHCCCCCCCCC
Confidence            34567789999999999999999999999 779999998884

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.91  E-value=5.8e-10  Score=54.74  Aligned_cols=34  Identities=9%  Similarity=-0.248  Sum_probs=27.2

Q ss_pred             hcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         126 FHGGADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       126 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      |.++++|.|.+|++.|.....|.+|++.|+++.|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5677888888888888888888888888877654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1.9e-09  Score=60.90  Aligned_cols=42  Identities=21%  Similarity=0.371  Sum_probs=36.7

Q ss_pred             CccCCCCcccccc--cccccCCHHHHHHHHHHhcCCCCcccccc
Q psy8167          46 GPVVPIDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNV   87 (167)
Q Consensus        46 ~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~~   87 (167)
                      ....+++||.|.+  |+++|.....|..|++++|++++|+.|..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            3467789999976  99999999999999867899999987765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.88  E-value=1.4e-09  Score=52.73  Aligned_cols=32  Identities=28%  Similarity=0.501  Sum_probs=22.8

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPK  133 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~  133 (167)
                      ++|.|.+||+.|...+.|..|+++|.++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            35677777777777777777777777777664

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=2.1e-09  Score=56.20  Aligned_cols=41  Identities=22%  Similarity=0.330  Sum_probs=36.7

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCC-CCcccccc
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQ-NQPQHTNV   87 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~c~~   87 (167)
                      ..+.++++|.|..|++.|.....|..|+ ++|.+ +++|.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHE-RIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHH-TTCCSCCTTSSSCC
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4567789999999999999999999999 88999 99998863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.82  E-value=3.5e-09  Score=53.26  Aligned_cols=33  Identities=15%  Similarity=0.384  Sum_probs=21.0

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKL  134 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C  134 (167)
                      ++|.|.+||+.|...+.|..|+++|.++++|.+
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            346666666666666666666666666666554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.3e-09  Score=53.84  Aligned_cols=32  Identities=13%  Similarity=-0.139  Sum_probs=22.3

Q ss_pred             hcCCCCCCCCc--hhhhcCCHHHHHHHHhhcCCC
Q psy8167         126 FHGGADPKLMD--EQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       126 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      +.+++||+|..  |++.|.....|.+|+++|.++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45667777765  777777777777777777654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=4e-09  Score=59.55  Aligned_cols=36  Identities=19%  Similarity=0.287  Sum_probs=29.1

Q ss_pred             cCceeccc--ccccccChhHHHHHH-HhhcCCCCCCCCc
Q psy8167         101 IDRIRCEL--CDKSFTRKDSLKKHN-RIFHGGADPKLMD  136 (167)
Q Consensus       101 ~k~~~C~~--C~k~f~~~~~l~~H~-~~h~~~~~~~C~~  136 (167)
                      +|+|.|.+  |+++|.+.++|.+|+ ++|.+++||-|..
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            67788865  888888888888887 5788888888864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=5.4e-10  Score=65.05  Aligned_cols=55  Identities=16%  Similarity=0.134  Sum_probs=47.9

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      .+++.|..|++.|. ...|..|+ .|.+++++.|..|++.|.. ..|..|+++|.++.
T Consensus        15 ~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           15 LRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             CcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            34478999999994 89999999 8899999999999999885 89999999987653

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.3e-09  Score=54.34  Aligned_cols=34  Identities=6%  Similarity=-0.119  Sum_probs=27.8

Q ss_pred             HhhcCCCCCCCCchhhhcCCHHHHHHH-HhhcCCC
Q psy8167         124 RIFHGGADPKLMDEQMARGSADFLEVV-LNEDGEG  157 (167)
Q Consensus       124 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~  157 (167)
                      ++|.+++||+|..|++.|.....|..| ++.|.++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467788888999999999998899888 7777653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.76  E-value=7.3e-09  Score=52.04  Aligned_cols=36  Identities=19%  Similarity=0.532  Sum_probs=32.5

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHHhcCCCCcccc
Q psy8167          49 VPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHT   85 (167)
Q Consensus        49 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c   85 (167)
                      .++++|.|..|++.|.....|..|+ ..|.++++|.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHM-NVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHH-HTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHH-HHcCCCcccee
Confidence            4568899999999999999999999 78999999865

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.3e-09  Score=52.30  Aligned_cols=33  Identities=6%  Similarity=-0.268  Sum_probs=25.3

Q ss_pred             hhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         125 IFHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      .|.++++|.|.+|++.|.....|..|++.|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            356777888888888888888888888877654

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.73  E-value=3.2e-09  Score=59.30  Aligned_cols=46  Identities=13%  Similarity=0.268  Sum_probs=37.0

Q ss_pred             cCccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhc
Q psy8167          45 VGPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGA   94 (167)
Q Consensus        45 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~   94 (167)
                      ...+.++++|.|..|++.|.....|.    .+|.++++|.|..|++.|..
T Consensus         6 ~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~   51 (62)
T 1vd4_A            6 ERDSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEE   51 (62)
T ss_dssp             SSSCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEE
T ss_pred             HHHcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCcccc
Confidence            34577889999999999999988775    56999988777777776665

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4.3e-09  Score=51.90  Aligned_cols=33  Identities=18%  Similarity=0.006  Sum_probs=25.1

Q ss_pred             hhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         125 IFHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      .|.++++|+|.+|++.|.....|..|++.|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            356777888888888888888888888777654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.73  E-value=3.8e-09  Score=55.86  Aligned_cols=35  Identities=6%  Similarity=-0.349  Sum_probs=24.9

Q ss_pred             hhcCCCCCCCCchhhhcCCHHHHHHHHh-hcCCCCC
Q psy8167         125 IFHGGADPKLMDEQMARGSADFLEVVLN-EDGEGEP  159 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~  159 (167)
                      +|.++++|.|.+|++.|.....|.+|++ .|.++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3667788888888888888888888888 7776544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4.7e-09  Score=51.67  Aligned_cols=33  Identities=18%  Similarity=-0.004  Sum_probs=23.7

Q ss_pred             hhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         125 IFHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      +|.++++|.|.+|++.|.....|..|++.|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            356667777777777777777777777777654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=8.6e-09  Score=50.67  Aligned_cols=32  Identities=9%  Similarity=-0.269  Sum_probs=24.8

Q ss_pred             hcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         126 FHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       126 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      |.++++|.|.+|++.|.....|..|++.|.++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            56677888888888888888888888877654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.70  E-value=9.6e-09  Score=49.70  Aligned_cols=31  Identities=6%  Similarity=-0.247  Sum_probs=28.9

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      +||.|.+|++.|.....|..|+++|.+++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5899999999999999999999999998874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=2.8e-09  Score=52.91  Aligned_cols=33  Identities=9%  Similarity=-0.241  Sum_probs=23.9

Q ss_pred             hhcCCCCCCCCchhhhcCCH-HHHHHHHhhcCCC
Q psy8167         125 IFHGGADPKLMDEQMARGSA-DFLEVVLNEDGEG  157 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~~~~~  157 (167)
                      +|.++++|.|..|++.|... ..|..|++.|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            45667777777777777777 7777777776554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=2.7e-10  Score=68.41  Aligned_cols=52  Identities=13%  Similarity=0.198  Sum_probs=43.1

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      .++|.|.+|++.|.....|..|+++|.+++||+|..|.    ...+|..|.+.|.+
T Consensus        23 ~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           23 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            34589999999999999999999999999999998765    45556677777765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.2e-08  Score=50.22  Aligned_cols=32  Identities=9%  Similarity=-0.219  Sum_probs=21.0

Q ss_pred             hcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         126 FHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       126 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      |.++++|.|..|++.|.....|..|++.|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45566677777777777777777776666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.63  E-value=1.5e-09  Score=52.31  Aligned_cols=30  Identities=30%  Similarity=0.449  Sum_probs=18.7

Q ss_pred             ceecccccccccChhHHHHHHHhhcCCCCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGGADP  132 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~  132 (167)
                      +|.|.+||+.|...+.|..|+++|.+++++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            456666666666666666666666665554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.62  E-value=3.9e-08  Score=47.84  Aligned_cols=34  Identities=24%  Similarity=0.275  Sum_probs=29.8

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCCCc
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQP   82 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~   82 (167)
                      +.++++|.|..|++.|.....|..|+ +.|.+++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHI-REVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHH-HHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHH-HHHcCCCC
Confidence            45678999999999999999999999 77888764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.62  E-value=3.6e-08  Score=48.03  Aligned_cols=34  Identities=24%  Similarity=0.432  Sum_probs=30.1

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCCCc
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQP   82 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~   82 (167)
                      +.++++|.|..|++.|.....|..|+ ++|.+++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHL-KVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHH-GGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHH-HHcCCCCC
Confidence            45678999999999999999999999 77988764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=3.9e-08  Score=48.54  Aligned_cols=35  Identities=20%  Similarity=0.409  Sum_probs=30.9

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCCc
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQP   82 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~   82 (167)
                      .+.++++|.|..|++.|.....|..|+ ..|.+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHI-KTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHH-HHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHH-HHHcCCCC
Confidence            466789999999999999999999999 77888764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.60  E-value=3.3e-08  Score=45.91  Aligned_cols=28  Identities=29%  Similarity=0.517  Sum_probs=19.6

Q ss_pred             CceecccccccccChhHHHHHHHhhcCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      ++|.|..||+.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3567777777777777777777776654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=1.5e-08  Score=50.52  Aligned_cols=33  Identities=9%  Similarity=-0.144  Sum_probs=17.1

Q ss_pred             cCCCCCCCC--chhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         127 HGGADPKLM--DEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       127 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      .++++|.|.  .|++.|.....|.+|++.|.+++|
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            344555555  355555555555555555554443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.59  E-value=3.3e-08  Score=46.15  Aligned_cols=26  Identities=23%  Similarity=0.492  Sum_probs=14.2

Q ss_pred             eecccccccccChhHHHHHHHhhcCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      |.|.+||+.|...+.|..|+++|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHccC
Confidence            45555555555555555555555544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.58  E-value=4.9e-08  Score=45.55  Aligned_cols=27  Identities=22%  Similarity=0.520  Sum_probs=15.3

Q ss_pred             CceecccccccccChhHHHHHHHhhcC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      ++|.|..||+.|.....|..|+++|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            345555556666555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.57  E-value=3.1e-08  Score=46.28  Aligned_cols=30  Identities=7%  Similarity=-0.002  Sum_probs=27.4

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCCCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEGEP  159 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  159 (167)
                      ++|.|..|++.|.....|..|++.|++++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            479999999999999999999999988764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.55  E-value=5.2e-08  Score=45.14  Aligned_cols=25  Identities=36%  Similarity=0.865  Sum_probs=13.2

Q ss_pred             eecccccccccChhHHHHHHHhhcC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      |.|.+||+.|.....|..|+++|++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcC
Confidence            4555555555555555555555443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.55  E-value=2.8e-08  Score=49.12  Aligned_cols=28  Identities=32%  Similarity=0.560  Sum_probs=24.4

Q ss_pred             CceecccccccccChhHHHHHHHhhcCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      ++|.|++|++.|.....|..|+++|.++
T Consensus        10 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A           10 KPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             SSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            3478999999999999999999998763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.55  E-value=3.9e-08  Score=45.92  Aligned_cols=29  Identities=3%  Similarity=-0.292  Sum_probs=26.7

Q ss_pred             CCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         129 GADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       129 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      +++|.|..|++.|.....|..|++.|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46899999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=8.2e-08  Score=48.04  Aligned_cols=33  Identities=24%  Similarity=0.298  Sum_probs=29.0

Q ss_pred             ccCCCCcccccc--cccccCCHHHHHHHHHHhcCCC
Q psy8167          47 PVVPIDRIPCTL--CDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        47 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      .+.+++||.|..  |++.|.....|..|+ ++|++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~-r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHL-KVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHH-HHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence            456789999986  999999999999999 779875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.53  E-value=6e-08  Score=44.87  Aligned_cols=27  Identities=41%  Similarity=0.817  Sum_probs=18.7

Q ss_pred             ceecccccccccChhHHHHHHHhhcCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      +|.|..||+.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            466777777777777777777776654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=5.8e-08  Score=54.79  Aligned_cols=29  Identities=28%  Similarity=0.516  Sum_probs=17.1

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      +++|.|.+|++.|.+...|.+|+++|+++
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            45566666666666666666666665543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.53  E-value=2.3e-08  Score=49.40  Aligned_cols=22  Identities=27%  Similarity=0.635  Sum_probs=12.9

Q ss_pred             CceecccccccccChhHHHHHH
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHN  123 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~  123 (167)
                      ++|.|.+||+.|.+.++|.+|+
T Consensus         7 kp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCEETTTTEECSCHHHHHHHH
T ss_pred             cCeECCCCCCccCCHhHccCcC
Confidence            4455666666666666666655

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.53  E-value=5.9e-08  Score=44.95  Aligned_cols=28  Identities=7%  Similarity=-0.160  Sum_probs=25.9

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999999765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=8.1e-08  Score=47.69  Aligned_cols=33  Identities=21%  Similarity=0.277  Sum_probs=29.0

Q ss_pred             cCceecc--cccccccChhHHHHHHHhhcCCCCCC
Q psy8167         101 IDRIRCE--LCDKSFTRKDSLKKHNRIFHGGADPK  133 (167)
Q Consensus       101 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~~~~  133 (167)
                      +++|.|.  .|++.|...+.|..|+++|.++++|.
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            3458999  59999999999999999999998863

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=1.1e-07  Score=46.56  Aligned_cols=33  Identities=21%  Similarity=0.250  Sum_probs=29.3

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      .+.++++|.|..|++.|.....|..|+ ++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHL-RKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHH-HHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHH-HHccCC
Confidence            466778999999999999999999999 778775

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.51  E-value=3e-08  Score=49.16  Aligned_cols=32  Identities=9%  Similarity=-0.162  Sum_probs=21.2

Q ss_pred             hcCCCCCCCCc--hhhhcCCHHHHHHHHhhcCCC
Q psy8167         126 FHGGADPKLMD--EQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       126 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      |.++++|.|.+  |++.|.....|.+|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45666777763  777777777777777766553

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.51  E-value=4.4e-08  Score=45.14  Aligned_cols=25  Identities=28%  Similarity=0.700  Sum_probs=12.8

Q ss_pred             CceecccccccccChhHHHHHHHhh
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      ++|.|.+||+.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.50  E-value=5.7e-08  Score=44.93  Aligned_cols=27  Identities=33%  Similarity=0.650  Sum_probs=17.6

Q ss_pred             ceecccccccccChhHHHHHHHhhcCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      +|.|..||+.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            456666666666666666666666554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.50  E-value=4.5e-08  Score=44.74  Aligned_cols=25  Identities=24%  Similarity=0.485  Sum_probs=13.1

Q ss_pred             CceecccccccccChhHHHHHHHhh
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      ++|.|..||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555555543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.50  E-value=3.8e-08  Score=45.12  Aligned_cols=24  Identities=29%  Similarity=0.498  Sum_probs=12.3

Q ss_pred             CceecccccccccChhHHHHHHHh
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      ++|.|.+||+.|...+.|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            345555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.50  E-value=7.5e-08  Score=44.30  Aligned_cols=28  Identities=4%  Similarity=-0.304  Sum_probs=25.5

Q ss_pred             CCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         129 GADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       129 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      +++|.|..|++.|.....|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999998863

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.50  E-value=4.3e-09  Score=50.57  Aligned_cols=31  Identities=6%  Similarity=-0.285  Sum_probs=28.8

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      +||.|..|++.|.....|..|+++|.+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999988874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.49  E-value=6e-08  Score=44.40  Aligned_cols=27  Identities=7%  Similarity=-0.096  Sum_probs=24.7

Q ss_pred             CCCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         129 GADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       129 ~~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      ++||.|..|++.|.....|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999999874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=1.8e-07  Score=45.82  Aligned_cols=33  Identities=24%  Similarity=0.419  Sum_probs=29.3

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      .+.++++|.|..|++.|.....|..|+ .+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHM-NRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHH-HHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHH-HHhccC
Confidence            466778999999999999999999999 778765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.48  E-value=9.1e-08  Score=43.68  Aligned_cols=27  Identities=7%  Similarity=-0.144  Sum_probs=24.8

Q ss_pred             CCCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         129 GADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       129 ~~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      +++|.|..|++.|.....|..|++.|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999999874

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=1.6e-07  Score=45.90  Aligned_cols=34  Identities=29%  Similarity=0.532  Sum_probs=29.5

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQ   81 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~   81 (167)
                      .+.++++|.|..|++.|.....|..|+ .+|.+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHK-LLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHH-HHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHH-HHhcCCC
Confidence            456778999999999999999999999 7787753

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.48  E-value=4.8e-09  Score=55.17  Aligned_cols=37  Identities=3%  Similarity=-0.215  Sum_probs=29.5

Q ss_pred             HHHHhhcCCCCCCCC--chhhhcCCHHHHHHHHhhcCCC
Q psy8167         121 KHNRIFHGGADPKLM--DEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      .|+..|.++++|.|.  .|++.|.....|.+|++.|.++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            345567888888885  6888888888888888888765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=1.4e-07  Score=46.23  Aligned_cols=34  Identities=15%  Similarity=0.362  Sum_probs=29.4

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQ   81 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~   81 (167)
                      .+.++++|.|..|++.|.....|..|+ .+|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHM-LVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHH-TTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHH-HHhcCCC
Confidence            356678999999999999999999999 7787653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.47  E-value=1e-07  Score=45.07  Aligned_cols=25  Identities=44%  Similarity=0.930  Sum_probs=12.3

Q ss_pred             eecc--cccccccChhHHHHHHHhhcC
Q psy8167         104 IRCE--LCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       104 ~~C~--~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      |.|.  .||+.|...+.|..|+++|.+
T Consensus         3 ~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            3 FMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             cCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            4444  455555555555555554443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.47  E-value=9.6e-08  Score=47.16  Aligned_cols=26  Identities=23%  Similarity=0.513  Sum_probs=24.2

Q ss_pred             cCCCCcccccccccccCCHHHHHHHH
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHI   73 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~   73 (167)
                      ..++++|.|..|++.|.....|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46789999999999999999999998

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.46  E-value=8.5e-08  Score=43.67  Aligned_cols=24  Identities=8%  Similarity=-0.316  Sum_probs=11.7

Q ss_pred             CCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         132 PKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       132 ~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      |.|..|++.|.....|..|++.|.
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            444445555555444555544443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.46  E-value=5e-08  Score=45.24  Aligned_cols=28  Identities=7%  Similarity=-0.157  Sum_probs=25.9

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      +||.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5799999999999999999999999765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.83  E-value=2.1e-08  Score=46.66  Aligned_cols=25  Identities=12%  Similarity=-0.127  Sum_probs=12.0

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      ||.|..|++.|.....|..|++.|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            3444444444444444444444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.45  E-value=1.1e-07  Score=45.20  Aligned_cols=26  Identities=31%  Similarity=0.699  Sum_probs=12.5

Q ss_pred             ceecc--cccccccChhHHHHHHHhhcC
Q psy8167         103 RIRCE--LCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       103 ~~~C~--~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +|.|.  .||+.|...+.|..|+++|.+
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            44444  455555555555555444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.45  E-value=1.5e-07  Score=44.77  Aligned_cols=30  Identities=10%  Similarity=-0.249  Sum_probs=27.1

Q ss_pred             CCCCCCC--chhhhcCCHHHHHHHHhhcCCCC
Q psy8167         129 GADPKLM--DEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       129 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      ++||.|.  .|++.|.....|..|+++|.+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4689999  89999999999999999998753

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.8e-07  Score=45.75  Aligned_cols=32  Identities=31%  Similarity=0.536  Sum_probs=28.3

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      +.++++|.|..|++.|.....|..|+ ++|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHL-RIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHH-HHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHH-HHhCCC
Confidence            45678999999999999999999999 778765

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.44  E-value=1.4e-07  Score=44.57  Aligned_cols=29  Identities=7%  Similarity=-0.242  Sum_probs=26.2

Q ss_pred             CCCCCC--chhhhcCCHHHHHHHHhhcCCCC
Q psy8167         130 ADPKLM--DEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       130 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      +||.|.  .|++.|.....|..|+++|.+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            489998  99999999999999999998753

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.81  E-value=2.5e-08  Score=46.41  Aligned_cols=28  Identities=36%  Similarity=0.656  Sum_probs=25.6

Q ss_pred             CceecccccccccChhHHHHHHHhhcCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      ++|.|.+||+.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4689999999999999999999998765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.43  E-value=1.2e-07  Score=43.09  Aligned_cols=26  Identities=35%  Similarity=0.896  Sum_probs=23.4

Q ss_pred             ceecccccccccChhHHHHHHHhhcC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +|.|.+||+.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            47899999999999999999999875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=2.7e-08  Score=46.55  Aligned_cols=27  Identities=7%  Similarity=-0.135  Sum_probs=14.1

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      ++|.|..|++.|.....|..|++.|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            345555555555555555555555443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.5e-07  Score=54.50  Aligned_cols=60  Identities=20%  Similarity=0.323  Sum_probs=47.9

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHh
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      ..+-+++++.|..|++.|. ...|..|+ . |.++++                     +.|..|++.|. ...|..|+++
T Consensus        10 ~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~-~c~~~~---------------------~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A           10 ETECPLRLAVCQHCDLELS-ILKLKEHE-D-YCGART---------------------ELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCCCCCCCEECSSSCCEEC-HHHHHHHH-H-HHHHCE---------------------EECSSSCCEEE-TTGGGTHHHH
T ss_pred             cccCCCcccCCcccChHhh-HHHHHHHH-h-HcCCCc---------------------eEcccCCCcCc-HHHHHHHHHH
Confidence            3456678999999999994 89999997 4 666555                     68888898877 4889999998


Q ss_pred             hcCCC
Q psy8167         126 FHGGA  130 (167)
Q Consensus       126 h~~~~  130 (167)
                      +.+++
T Consensus        65 c~~~~   69 (75)
T 2d9k_A           65 CGREG   69 (75)
T ss_dssp             BTTBS
T ss_pred             ccCCc
Confidence            77653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=3.2e-08  Score=46.31  Aligned_cols=28  Identities=29%  Similarity=0.632  Sum_probs=25.6

Q ss_pred             CceecccccccccChhHHHHHHHhhcCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      ++|.|..||+.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5789999999999999999999998765

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=3.6e-08  Score=59.03  Aligned_cols=42  Identities=19%  Similarity=0.441  Sum_probs=35.7

Q ss_pred             CccCCCCcccccccccccCCHHHHHHHHHHhcCCCCcccccch
Q psy8167          46 GPVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI   88 (167)
Q Consensus        46 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c   88 (167)
                      ..+.++++|.|..|++.|.....|..|+ .+|.+++||.|..|
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~~   59 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHL-NIHNEEFQKRAKRQ   59 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHH-HHHHHHHHHHCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHH-HHhCCCCCcccchh
Confidence            3567789999999999999999999999 77988888666544

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.40  E-value=7.2e-08  Score=44.56  Aligned_cols=28  Identities=11%  Similarity=-0.082  Sum_probs=25.8

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      +||.|..|++.|.....|..|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5899999999999999999999998765

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=8.4e-08  Score=44.36  Aligned_cols=28  Identities=11%  Similarity=-0.094  Sum_probs=25.7

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4799999999999999999999998765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2e-07  Score=45.92  Aligned_cols=33  Identities=24%  Similarity=0.438  Sum_probs=29.0

Q ss_pred             ccCCCCcccccccccccCCH-HHHHHHHHHhcCCC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRK-DSLKKHIRIFHTQN   80 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~-~~l~~H~~~~h~~~   80 (167)
                      .+.++++|.|..|++.|... ..|..|+ .+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~-~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHI-WAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHH-HHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHH-HhcCCC
Confidence            46677899999999999999 9999999 778765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=4.5e-08  Score=44.31  Aligned_cols=24  Identities=4%  Similarity=-0.259  Sum_probs=12.8

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhc
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNED  154 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~  154 (167)
                      ||.|..|++.|.....|..|++.|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555544

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.36  E-value=2.6e-07  Score=48.59  Aligned_cols=35  Identities=17%  Similarity=0.333  Sum_probs=28.6

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCCCc
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQP   82 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~   82 (167)
                      +.++++|.|.+|++.|.....|..|++.+|.++..
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            56789999999999999999999999438988753

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.36  E-value=1.9e-07  Score=43.55  Aligned_cols=24  Identities=42%  Similarity=0.945  Sum_probs=11.6

Q ss_pred             eecccccccccChhHHHHH-HHhhc
Q psy8167         104 IRCELCDKSFTRKDSLKKH-NRIFH  127 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H-~~~h~  127 (167)
                      |.|..||+.|...+.|..| +++|.
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             cCCcccCcccCChHHHHHHHHHHcc
Confidence            4455555555555555555 34443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.34  E-value=2.2e-07  Score=43.31  Aligned_cols=28  Identities=11%  Similarity=-0.223  Sum_probs=25.3

Q ss_pred             CCCCCCchhhhcCCHHHHHHH-HhhcCCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVV-LNEDGEG  157 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H-~~~~~~~  157 (167)
                      ++|.|..|++.|.....|..| ++.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            489999999999999999999 6888765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=4.1e-07  Score=44.86  Aligned_cols=33  Identities=24%  Similarity=0.316  Sum_probs=28.9

Q ss_pred             ccCCCCcccccccccccCCHHHHHHH-HHHhcCCC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKH-IRIFHTQN   80 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~   80 (167)
                      .+.++++|.|..|++.|.....|..| + ..|.+.
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVI-QKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHH-HHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHH-HHccCc
Confidence            46678999999999999999999999 7 778764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.33  E-value=6.5e-07  Score=50.41  Aligned_cols=34  Identities=29%  Similarity=0.561  Sum_probs=30.3

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCCC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQ   81 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~   81 (167)
                      .+.++++|.|..|++.|.....|..|+ ++|++..
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~-r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHE-AQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHH-HHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhh-hhhCCCc
Confidence            467789999999999999999999999 7798864

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.32  E-value=4.1e-07  Score=44.85  Aligned_cols=30  Identities=23%  Similarity=0.533  Sum_probs=25.7

Q ss_pred             cCceeccc--ccccccChhHHHHHHHhhcCCC
Q psy8167         101 IDRIRCEL--CDKSFTRKDSLKKHNRIFHGGA  130 (167)
Q Consensus       101 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~  130 (167)
                      .++|.|.+  ||+.|...+.|..|+++|.+++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            34588984  9999999999999999988763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.66  E-value=6.8e-08  Score=43.70  Aligned_cols=25  Identities=32%  Similarity=0.583  Sum_probs=23.0

Q ss_pred             CceecccccccccChhHHHHHHHhh
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      ++|.|..||+.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4689999999999999999999986

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.19  E-value=1e-06  Score=40.46  Aligned_cols=25  Identities=28%  Similarity=0.680  Sum_probs=15.0

Q ss_pred             ceecc--cccccccChhHHHHHHHhhc
Q psy8167         103 RIRCE--LCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       103 ~~~C~--~C~k~f~~~~~l~~H~~~h~  127 (167)
                      +|.|.  .||+.|...+.|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            35566  66666666666666666543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.13  E-value=9.2e-07  Score=40.67  Aligned_cols=27  Identities=4%  Similarity=-0.301  Sum_probs=24.5

Q ss_pred             CCCCCC--chhhhcCCHHHHHHHHhhcCC
Q psy8167         130 ADPKLM--DEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       130 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      ++|.|.  .|++.|.....|..|+++|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478999  999999999999999999863

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.12  E-value=1.3e-06  Score=45.57  Aligned_cols=30  Identities=20%  Similarity=0.417  Sum_probs=25.4

Q ss_pred             cCceecc--cccccccChhHHHHHHHhhcCCC
Q psy8167         101 IDRIRCE--LCDKSFTRKDSLKKHNRIFHGGA  130 (167)
Q Consensus       101 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~  130 (167)
                      +++|.|.  .||+.|...+.|..|+++|.+++
T Consensus        16 ~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3447895  79999999999999999988763

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.84  E-value=2e-05  Score=43.99  Aligned_cols=50  Identities=12%  Similarity=0.052  Sum_probs=42.7

Q ss_pred             cccccccccChhHHHHHH-HhhcCCC------CCCCC--chhhhcCCHHHHHHHHhhcC
Q psy8167         106 CELCDKSFTRKDSLKKHN-RIFHGGA------DPKLM--DEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       106 C~~C~k~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~~  155 (167)
                      ...|++.|.....|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            355999999999999998 4676655      78998  69999999999999999764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.76  E-value=0.00011  Score=40.95  Aligned_cols=57  Identities=18%  Similarity=0.247  Sum_probs=43.6

Q ss_pred             ccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecc--cccccccChhHHHHHHHhhc
Q psy8167          56 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus        56 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~--~C~k~f~~~~~l~~H~~~h~  127 (167)
                      +..|++.|.....|..|+...|.+.++-               .-...|.|.  .|++.+.....|..|++..|
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~---------------~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFK---------------HPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCC---------------CSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccC---------------CCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            3469999999999999996689876520               001246775  79999999999999998754

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.18  E-value=6.7e-05  Score=47.18  Aligned_cols=30  Identities=10%  Similarity=0.001  Sum_probs=22.7

Q ss_pred             HHhhcCCCCCCCCchhhhcCCHHHHHHHHh
Q psy8167         123 NRIFHGGADPKLMDEQMARGSADFLEVVLN  152 (167)
Q Consensus       123 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  152 (167)
                      ...|.|+++|.|..|++.|.+...|..|++
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            344667778888888888888888888876

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.90  E-value=0.001  Score=42.24  Aligned_cols=52  Identities=13%  Similarity=0.096  Sum_probs=38.2

Q ss_pred             CceecccccccccChhHHHHHH--Hhh-------------------------------cCCCCCCCCchhhhcCCHHHHH
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHN--RIF-------------------------------HGGADPKLMDEQMARGSADFLE  148 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~--~~h-------------------------------~~~~~~~C~~C~~~f~~~~~l~  148 (167)
                      +++.|.+|...|...+.+..|.  +.|                               .+...|-|.+|++.|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            4466777777777777777665  222                               1234578999999999999999


Q ss_pred             HHHhh
Q psy8167         149 VVLNE  153 (167)
Q Consensus       149 ~H~~~  153 (167)
                      .|...
T Consensus       111 ~H~~g  115 (127)
T 1zu1_A          111 SHYIG  115 (127)
T ss_dssp             HHHTS
T ss_pred             HHHCC
Confidence            99963

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.16  E-value=0.0046  Score=31.55  Aligned_cols=23  Identities=26%  Similarity=0.547  Sum_probs=13.0

Q ss_pred             ceecccccccccChhHHHHHHHh
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      .|.|+.|+..|.....|+.||+.
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhh
Confidence            34555566666555555555553

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.14  E-value=0.016  Score=29.55  Aligned_cols=23  Identities=26%  Similarity=0.629  Sum_probs=21.2

Q ss_pred             CcccccccccccCCHHHHHHHHH
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIR   74 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~   74 (167)
                      ..|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            56899999999999999999994

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.99  E-value=0.0017  Score=40.82  Aligned_cols=27  Identities=22%  Similarity=0.377  Sum_probs=24.4

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHH
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHI   73 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~   73 (167)
                      .+.++++|.|..|++.|.+...|..|+
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~   70 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHF   70 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHH
Confidence            355678999999999999999999998

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.69  E-value=0.0028  Score=40.17  Aligned_cols=74  Identities=12%  Similarity=0.187  Sum_probs=46.0

Q ss_pred             CcccccccccccCCHHHHHHHHH-HhcCCC-Ccccccch------hhhhhccc---cccccCceecccccccccChhHHH
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIR-IFHTQN-QPQHTNVI------EVALGARA---NAAFIDRIRCELCDKSFTRKDSLK  120 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~-~~~~c~~c------~~~~~~~~---~~~l~k~~~C~~C~k~f~~~~~l~  120 (167)
                      +++.|..|+..|.+...+..|.. ..|... +.+.+..+      +..+....   ...-...|.|..|++.|.....+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            56899999999999999999983 123221 11211100      11111000   001145678999999999999999


Q ss_pred             HHHHh
Q psy8167         121 KHNRI  125 (167)
Q Consensus       121 ~H~~~  125 (167)
                      .|...
T Consensus       111 ~H~~g  115 (127)
T 1zu1_A          111 SHYIG  115 (127)
T ss_dssp             HHHTS
T ss_pred             HHHCC
Confidence            99753

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.93  E-value=0.026  Score=26.84  Aligned_cols=27  Identities=30%  Similarity=0.518  Sum_probs=24.5

Q ss_pred             ccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          54 IPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        54 ~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      |.|+.|-+.|.....|..|....|...
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            999999999999999999998888643

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.87  E-value=0.028  Score=37.21  Aligned_cols=57  Identities=11%  Similarity=-0.003  Sum_probs=41.8

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      ++..|+.|+..+ .+..|..|+...-..+.-.|..|+..|.. ..|..|...+.++.+.
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            345788898877 56678889876677778889999988855 5678999888776553

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.42  E-value=0.043  Score=26.08  Aligned_cols=24  Identities=21%  Similarity=-0.142  Sum_probs=13.2

Q ss_pred             CCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         132 PKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       132 ~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      |-|++|-+.|.+...|..|....|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            445555555555555555555433

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=92.85  E-value=0.036  Score=33.49  Aligned_cols=11  Identities=9%  Similarity=0.214  Sum_probs=5.6

Q ss_pred             cccccchhhhh
Q psy8167          82 PQHTNVIEVAL   92 (167)
Q Consensus        82 ~~~c~~c~~~~   92 (167)
                      |+.|..||+.|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            45555555554

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=92.43  E-value=0.034  Score=32.47  Aligned_cols=23  Identities=39%  Similarity=0.615  Sum_probs=12.8

Q ss_pred             eecccccccccChhHHHHHHHhhcCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      ..|-+||+.|..   |.+|++++|+.
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgl   44 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSM   44 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCS
T ss_pred             eEecccchhhHH---HHHHHHHccCC
Confidence            356666666653   44566655544

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=92.41  E-value=0.068  Score=31.18  Aligned_cols=31  Identities=13%  Similarity=-0.048  Sum_probs=24.8

Q ss_pred             cCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         127 HGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       127 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      ...+...|-+||+.|..   |.+|+..+|+..|.
T Consensus        17 i~~d~iiClecGK~fK~---LkRHL~~~hgltpe   47 (87)
T 2jsp_A           17 VQDDHIVCLECGGSFKS---LKRHLTTHHSMTPE   47 (87)
T ss_dssp             BCSSCEECTBTCCEESB---HHHHHHHTTCSCHH
T ss_pred             cCCCceEecccchhhHH---HHHHHHHccCCCHH
Confidence            34556889999999995   78999998776654

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=91.33  E-value=0.083  Score=26.97  Aligned_cols=7  Identities=29%  Similarity=0.971  Sum_probs=3.5

Q ss_pred             eeccccc
Q psy8167         104 IRCELCD  110 (167)
Q Consensus       104 ~~C~~C~  110 (167)
                      +.|++||
T Consensus        31 w~CP~Cg   37 (46)
T 6rxn_A           31 WCCPVCG   37 (46)
T ss_dssp             CBCTTTC
T ss_pred             CcCcCCC
Confidence            4455554

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.08  E-value=0.18  Score=23.27  Aligned_cols=25  Identities=36%  Similarity=0.684  Sum_probs=22.3

Q ss_pred             ccccccccccCCHHHHHHHHHHhcC
Q psy8167          54 IPCTLCDKTFTRKDSLKKHIRIFHT   78 (167)
Q Consensus        54 ~~C~~C~~~f~~~~~l~~H~~~~h~   78 (167)
                      -.|.+|.+.|....+|..|++..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4699999999999999999987774

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.74  E-value=0.59  Score=22.28  Aligned_cols=23  Identities=22%  Similarity=0.469  Sum_probs=20.7

Q ss_pred             CCcccccccccccCCHHHHHHHH
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHI   73 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~   73 (167)
                      ...+.|..|+-.|.....+..|.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHK   28 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhh
Confidence            35688999999999999999997

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.58  E-value=0.31  Score=23.27  Aligned_cols=23  Identities=0%  Similarity=-0.285  Sum_probs=11.8

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhh
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNE  153 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~  153 (167)
                      ++.|..|+-+|.+-..+..|++.
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhhhee
Confidence            34455555555555555555543

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=89.87  E-value=0.14  Score=30.89  Aligned_cols=30  Identities=13%  Similarity=0.182  Sum_probs=22.6

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMAR  141 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  141 (167)
                      ..+++|..||..|.           -...+|.+|+.|+...
T Consensus        65 v~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           65 IKPAQCRKCGFVFK-----------AEINIPSRCPKCKSEW   94 (105)
T ss_dssp             ECCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCC
T ss_pred             EECcChhhCcCeec-----------ccCCCCCCCcCCCCCc
Confidence            56789999999991           1335689999997543

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=87.90  E-value=0.3  Score=23.90  Aligned_cols=24  Identities=17%  Similarity=0.360  Sum_probs=18.5

Q ss_pred             ceecccccccccChhHHHHHHHhhc
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      .+.|+.||+.+.. ..+..|...|-
T Consensus         9 ~~~C~~C~~~i~~-~~~~EH~D~H~   32 (39)
T 2i5o_A            9 QVPCEKCGSLVPV-WDMPEHMDYHF   32 (39)
T ss_dssp             EEECTTTCCEEEG-GGHHHHHHHHH
T ss_pred             CcccccccCcCCc-ccccchhhHHH
Confidence            4789999998887 56678877653

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=87.80  E-value=0.22  Score=25.26  Aligned_cols=7  Identities=43%  Similarity=1.198  Sum_probs=3.6

Q ss_pred             ecccccc
Q psy8167         105 RCELCDK  111 (167)
Q Consensus       105 ~C~~C~k  111 (167)
                      +|++||.
T Consensus        25 rCpyCGy   31 (48)
T 4ayb_P           25 RCPYCGY   31 (48)
T ss_dssp             CCTTTCC
T ss_pred             ccCccCc
Confidence            4555553

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=86.06  E-value=0.53  Score=24.64  Aligned_cols=20  Identities=35%  Similarity=0.796  Sum_probs=18.4

Q ss_pred             ccccccccccCCHHHHHHHH
Q psy8167          54 IPCTLCDKTFTRKDSLKKHI   73 (167)
Q Consensus        54 ~~C~~C~~~f~~~~~l~~H~   73 (167)
                      -.|..|+..|..+..++.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            47999999999999999998

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=86.02  E-value=0.65  Score=30.46  Aligned_cols=77  Identities=12%  Similarity=0.163  Sum_probs=45.6

Q ss_pred             Ccccc--cccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccc-cc-----cCceecccccccccChhHHHHHH
Q psy8167          52 DRIPC--TLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANA-AF-----IDRIRCELCDKSFTRKDSLKKHN  123 (167)
Q Consensus        52 ~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~-~l-----~k~~~C~~C~k~f~~~~~l~~H~  123 (167)
                      -...|  .-|+..+. ...+..|. . .-.-.+..|+.|+..+...... .+     .+...|..|+..+.. ..|..|.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~-~-~C~~~~v~C~~C~~~~~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~  156 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQ-A-HCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHD  156 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHH-T-TCTTSEEECTTTCCEEEGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHH-h-cCCceeeECCCCChHHHHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHH
Confidence            34567  35666554 44566776 4 2234567888887766431111 00     455679999987755 5778999


Q ss_pred             HhhcCCCCC
Q psy8167         124 RIFHGGADP  132 (167)
Q Consensus       124 ~~h~~~~~~  132 (167)
                      .++.|+.++
T Consensus       157 ~~~~~~~~~  165 (170)
T 3hcs_A          157 QNCPLALEH  165 (170)
T ss_dssp             TTCCC----
T ss_pred             HhCcChhhh
Confidence            988777553

>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...

Probab=85.80  E-value=0.22  Score=26.12  Aligned_cols=9  Identities=44%  Similarity=1.007  Sum_probs=4.5

Q ss_pred             Cceeccccc
Q psy8167         102 DRIRCELCD  110 (167)
Q Consensus       102 k~~~C~~C~  110 (167)
                      ..+.|++||
T Consensus        34 ~dw~CP~Cg   42 (52)
T 1yk4_A           34 DDWVCPLCG   42 (52)
T ss_dssp             TTCBCTTTC
T ss_pred             CCCcCCCCC
Confidence            334555555

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=85.55  E-value=0.24  Score=28.27  Aligned_cols=46  Identities=17%  Similarity=0.166  Sum_probs=29.7

Q ss_pred             eecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHH
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVL  151 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  151 (167)
                      |.|..||..+ .+..+..|...=.+-..+.|..|++.|.. ..++.|.
T Consensus        11 F~C~~Cgd~l-KK~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A           11 FTCNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             EEESSSCCEE-ETTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             EEcCCCCCee-ecccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            6788888554 44567778654222346888888888874 4455554

>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}

Probab=85.37  E-value=0.22  Score=28.65  Aligned_cols=13  Identities=15%  Similarity=0.539  Sum_probs=8.7

Q ss_pred             CcccccccccccC
Q psy8167          52 DRIPCTLCDKTFT   64 (167)
Q Consensus        52 ~~~~C~~C~~~f~   64 (167)
                      ..|.|..||..|.
T Consensus        26 ~~y~C~vCGyvYD   38 (81)
T 2kn9_A           26 KLFRCIQCGFEYD   38 (81)
T ss_dssp             CEEEETTTCCEEE
T ss_pred             ceEEeCCCCEEEc
Confidence            4577777776554

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=85.28  E-value=0.46  Score=26.64  Aligned_cols=54  Identities=17%  Similarity=0.049  Sum_probs=36.6

Q ss_pred             eec-ccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         104 IRC-ELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       104 ~~C-~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      ..| ..|+..+.+ ..|..|+...-..++..|..|+..|.. ..|..|.. .-+..++
T Consensus        17 v~C~~~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~~-~Cp~~~v   71 (76)
T 2yuc_A           17 IPCPNRCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHEG-MCPQESS   71 (76)
T ss_dssp             CBCTTCCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTTT-SCTTSSC
T ss_pred             cCCCccccHHhhH-hHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHHh-HCCCCcc
Confidence            357 578877654 566778775566677889999998864 56788874 3344443

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=85.03  E-value=0.72  Score=20.74  Aligned_cols=22  Identities=23%  Similarity=0.390  Sum_probs=16.3

Q ss_pred             ceecccccccccChhHHHHHHH
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNR  124 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~  124 (167)
                      .|.|++|.........|+.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            3678888888888877777753

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=84.76  E-value=0.41  Score=32.63  Aligned_cols=25  Identities=16%  Similarity=0.044  Sum_probs=17.8

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCCchhh
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQM  139 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~  139 (167)
                      ..|.|.+||..+.             +..|..|++|+.
T Consensus       170 ~~~~C~~CG~i~~-------------g~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHK-------------GEDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEE-------------SSCCSBCTTTCC
T ss_pred             cEEEECCCCCEEc-------------CcCCCCCCCCCC
Confidence            3578999987654             245788888864

>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...

Probab=84.74  E-value=0.32  Score=25.66  Aligned_cols=10  Identities=40%  Similarity=0.820  Sum_probs=5.2

Q ss_pred             cCceeccccc
Q psy8167         101 IDRIRCELCD  110 (167)
Q Consensus       101 ~k~~~C~~C~  110 (167)
                      ...+.|++||
T Consensus        34 P~dw~CP~Cg   43 (54)
T 4rxn_A           34 PDDWVCPLCG   43 (54)
T ss_dssp             CTTCBCTTTC
T ss_pred             CCCCcCcCCC
Confidence            3345566665

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.22  E-value=0.76  Score=26.18  Aligned_cols=41  Identities=10%  Similarity=0.152  Sum_probs=24.7

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhh
Q psy8167          50 PIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVAL   92 (167)
Q Consensus        50 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~   92 (167)
                      ..-.|.|..||..++-. .+..|. ..-.+-..|.|..|+..|
T Consensus         7 ~MV~F~C~~Cgd~lKK~-kv~~H~-~~Cr~~~~~SCIDC~~~F   47 (79)
T 1wjv_A            7 GMVFFTCNACGESVKKI-QVEKHV-SNCRNCECLSCIDCGKDF   47 (79)
T ss_dssp             CCCEEEESSSCCEEETT-HHHHHH-HHCTTCCEEEETTTTEEE
T ss_pred             ceeEEEcCCCCCeeecc-cchhHH-hhCCCCCcEEecccCCee
Confidence            34569999999876544 477887 434333344444444444

>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}

Probab=84.07  E-value=0.28  Score=26.00  Aligned_cols=9  Identities=22%  Similarity=0.527  Sum_probs=4.7

Q ss_pred             Cceeccccc
Q psy8167         102 DRIRCELCD  110 (167)
Q Consensus       102 k~~~C~~C~  110 (167)
                      ..+.|++||
T Consensus        35 ~dw~CP~Cg   43 (55)
T 2v3b_B           35 ADWVCPDCG   43 (55)
T ss_dssp             TTCCCTTTC
T ss_pred             CCCcCCCCC
Confidence            334555555

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.97  E-value=0.56  Score=26.62  Aligned_cols=25  Identities=28%  Similarity=0.606  Sum_probs=18.7

Q ss_pred             eeccccccccc-------ChhHHHHHHHhhcC
Q psy8167         104 IRCELCDKSFT-------RKDSLKKHNRIFHG  128 (167)
Q Consensus       104 ~~C~~C~k~f~-------~~~~l~~H~~~h~~  128 (167)
                      -.|.+|++.+.       .-+.|.+|++..|.
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~   60 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHR   60 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCH
Confidence            46888888887       34688888887663

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=83.97  E-value=1.4  Score=27.37  Aligned_cols=30  Identities=23%  Similarity=0.558  Sum_probs=25.5

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHHhcC
Q psy8167          49 VPIDRIPCTLCDKTFTRKDSLKKHIRIFHT   78 (167)
Q Consensus        49 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~   78 (167)
                      .++.+..|-.|...|..-..+..|++..|.
T Consensus        11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCceeEecCCCcccCHHHHHHHHHHhcC
Confidence            344668999999999999999999977773

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=83.76  E-value=0.1  Score=29.79  Aligned_cols=40  Identities=10%  Similarity=0.027  Sum_probs=24.6

Q ss_pred             eecccccccccChhHHHHHHHhhc---------------CCCCCCCCchhhhcCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFH---------------GGADPKLMDEQMARGS  143 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~---------------~~~~~~C~~C~~~f~~  143 (167)
                      -+|++||....+...+.+-+..--               .+--|+|+.||.-|..
T Consensus         9 ~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG   63 (95)
T 2k5c_A            9 AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYG   63 (95)
T ss_dssp             EECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEET
T ss_pred             ccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhc
Confidence            368888888777665554322110               1234889999877644

>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A

Probab=82.06  E-value=0.51  Score=24.68  Aligned_cols=8  Identities=25%  Similarity=0.904  Sum_probs=4.1

Q ss_pred             ceeccccc
Q psy8167         103 RIRCELCD  110 (167)
Q Consensus       103 ~~~C~~C~  110 (167)
                      .+.|++||
T Consensus        36 dw~CP~Cg   43 (52)
T 1e8j_A           36 DWACPVCG   43 (52)
T ss_dssp             TCCCSSSC
T ss_pred             CCcCCCCC
Confidence            34555555

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=81.76  E-value=0.85  Score=25.43  Aligned_cols=12  Identities=17%  Similarity=0.531  Sum_probs=7.1

Q ss_pred             eecccccccccC
Q psy8167         104 IRCELCDKSFTR  115 (167)
Q Consensus       104 ~~C~~C~k~f~~  115 (167)
                      |.|..||..|..
T Consensus        29 Y~C~~CG~~~e~   40 (70)
T 1twf_L           29 YICAECSSKLSL   40 (70)
T ss_dssp             EECSSSCCEECC
T ss_pred             EECCCCCCccee
Confidence            566666665544

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=81.74  E-value=0.7  Score=30.60  Aligned_cols=25  Identities=12%  Similarity=0.048  Sum_probs=17.3

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchh
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQ  138 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~  138 (167)
                      ...|.|.+||..+.             ++.|-.|++|+
T Consensus       136 ~~~~~C~~CG~i~~-------------~~~p~~CP~Cg  160 (170)
T 3pwf_A          136 KKVYICPICGYTAV-------------DEAPEYCPVCG  160 (170)
T ss_dssp             SCEEECTTTCCEEE-------------SCCCSBCTTTC
T ss_pred             CCeeEeCCCCCeeC-------------CCCCCCCCCCC
Confidence            34578888887654             24566888887

>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1

Probab=81.72  E-value=0.4  Score=27.97  Aligned_cols=13  Identities=15%  Similarity=0.529  Sum_probs=8.3

Q ss_pred             CcccccccccccC
Q psy8167          52 DRIPCTLCDKTFT   64 (167)
Q Consensus        52 ~~~~C~~C~~~f~   64 (167)
                      ..|.|..||..|.
T Consensus        34 ~~y~C~vCGyvYD   46 (87)
T 1s24_A           34 LKWICITCGHIYD   46 (87)
T ss_dssp             CEEEETTTTEEEE
T ss_pred             ceEECCCCCeEec
Confidence            4577777776544

>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...

Probab=81.29  E-value=0.34  Score=28.08  Aligned_cols=33  Identities=15%  Similarity=0.190  Sum_probs=18.9

Q ss_pred             CcccccchhhhhhccccccccCceecccccccccCh
Q psy8167          81 QPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRK  116 (167)
Q Consensus        81 ~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~  116 (167)
                      ..|.|+.|+.....  ... ...+.|..||+.|..-
T Consensus        26 ~~y~Cp~CG~~~v~--r~a-tGiW~C~~Cg~~~agg   58 (83)
T 1vq8_Z           26 EDHACPNCGEDRVD--RQG-TGIWQCSYCDYKFTGG   58 (83)
T ss_dssp             SCEECSSSCCEEEE--EEE-TTEEEETTTCCEEECC
T ss_pred             ccCcCCCCCCccee--ccC-CCeEECCCCCCEecCC
Confidence            35788888764322  111 2236788888776543

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=80.33  E-value=1.1  Score=30.59  Aligned_cols=23  Identities=26%  Similarity=0.098  Sum_probs=14.8

Q ss_pred             CCCCCchhhhcCC-HHHHHHHHhh
Q psy8167         131 DPKLMDEQMARGS-ADFLEVVLNE  153 (167)
Q Consensus       131 ~~~C~~C~~~f~~-~~~l~~H~~~  153 (167)
                      +.+|..|++.|.. -..|+.|+..
T Consensus       169 ~L~C~~C~~~f~n~~~~LK~HL~~  192 (204)
T 3sp4_A          169 DLKCWRCGETFGRHFTKLKAHLQE  192 (204)
T ss_dssp             CCBCTTTCCBCTTCHHHHHHHHHH
T ss_pred             CceeCCCCchhhcccHHHHHHHHH
Confidence            5666666666665 6666666653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	167
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	9e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	4e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.002
d2drpa2	26	g.37.1.1 (A:140-165) Tramtrack protein (two zinc-f	3e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	5e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.003
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	6e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.002
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	8e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.004
d2dmda2	26	g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {H	0.001
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.001
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.001
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.004
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 1e-08
 Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 22/67 (32%)

Query: 59  CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 118
           C K+FT K    +H+ +                              C +C K F  K  
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYG----------------------CGVCGKKFKMKHH 45

Query: 119 LKKHNRI 125
           L  H +I
Sbjct: 46  LVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 4e-04
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 56 CTLCDKTFTRKDSLKKHIRI 75
          C +C K F  K  L  H++I
Sbjct: 33 CGVCGKKFKMKHHLVGHMKI 52

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 1e-05
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHTQN 80
          C +C   FT+  ++K HI   HT+N
Sbjct: 11 CYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 7e-05
 Identities = 7/25 (28%), Positives = 11/25 (44%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHGG 129
            C +C   FT+  ++K H    H  
Sbjct: 10  ECYICHARFTQSGTMKMHILQKHTE 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 1e-05
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHTQNQP 82
          C  C K F+R D L  HI+  HT  +P
Sbjct: 8  CQSCGKGFSRPDHLNGHIKQVHTSERP 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 3e-05
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHGGADP 132
            C+ C K F+R D L  H +  H    P
Sbjct: 7   ICQSCGKGFSRPDHLNGHIKQVHTSERP 34

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.2 bits (87), Expect = 3e-05
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHT 78
          C +C + F R++ LK+H R  HT
Sbjct: 5  CEVCTRAFARQEHLKRHYRS-HT 26

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.7 bits (83), Expect = 9e-05
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHGG 129
            CE+C ++F R++ LK+H R  H  
Sbjct: 4   VCEVCTRAFARQEHLKRHYRS-HTN 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.8 bits (86), Expect = 4e-05
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHT 78
          C +C + F+R D L  HIR  HT
Sbjct: 6  CRICMRNFSRSDHLTTHIRT-HT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.7 bits (83), Expect = 1e-04
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHGG 129
           +C +C ++F+R D L  H R  H G
Sbjct: 5   QCRICMRNFSRSDHLTTHIRT-HTG 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 8e-05
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHT 78
          C  C K F+R   L +H R+ HT
Sbjct: 10 CVECGKAFSRSSILVQHQRV-HT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHGG 129
            C  C K+F+R   L +H R+ H G
Sbjct: 9   GCVECGKAFSRSSILVQHQRV-HTG 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 9e-05
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHTQN 80
          C+ CDKTF +K  L  H + +H  N
Sbjct: 11 CSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 1e-04
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHG 128
            C  CDK+F +K  L  H + +H 
Sbjct: 10  ACSHCDKTFRQKQLLDMHFKRYHD 33

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 1e-04
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHT 78
          C  C K F R D L KHI+  H 
Sbjct: 5  CPECPKRFMRSDHLSKHIKT-HQ 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 4e-04
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 1/25 (4%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHGG 129
            C  C K F R D L KH +  H  
Sbjct: 4   ACPECPKRFMRSDHLSKHIKT-HQN 27

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 2e-04
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 55 PCTLCDKTFTRKDSLKKHIRIFHTQNQP 82
          P   C K+F  K  LK+H+++ H+  + 
Sbjct: 5  PEPACGKSFNFKKHLKEHMKL-HSDTRD 31

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 0.002
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 106 CELCDKSFTRKDSLKKHNRIFHG 128
              C KSF  K  LK+H ++   
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSD 28

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

 Score = 34.6 bits (79), Expect = 3e-04
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 55 PCTLCDKTFTRKDSLKKHIRIFH 77
          PC  C K FTRKD++  H++I H
Sbjct: 3  PCPFCFKEFTRKDNMTAHVKIIH 25

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 5e-04
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)

Query: 59 CDKTFTRKDSLKKHIRIFHT 78
          C K FTR D L++H R  HT
Sbjct: 10 CGKRFTRSDELQRHKRT-HT 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.5 bits (72), Expect = 0.003
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)

Query: 106 CELCDKSFTRKDSLKKHNRIFHGG 129
              C K FTR D L++H R  H G
Sbjct: 7   WSYCGKRFTRSDELQRHKRT-HTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 5e-04
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)

Query: 59 CDKTFTRKDSLKKHIRIFHT 78
          C K+++R ++LK H+R  HT
Sbjct: 10 CRKSYSRLENLKTHLRS-HT 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.003
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 107 ELCDKSFTRKDSLKKHNRIFHGG 129
           E C KS++R ++LK H R  H G
Sbjct: 8   EGCRKSYSRLENLKTHLRS-HTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 6e-04
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)

Query: 59 CDKTFTRKDSLKKHIRIFHT 78
          CD+ F+R   L +HIRI HT
Sbjct: 10 CDRRFSRSADLTRHIRI-HT 28

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.9 bits (73), Expect = 0.002
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 107 ELCDKSFTRKDSLKKHNRIFHGG 129
           E CD+ F+R   L +H RI H G
Sbjct: 8   ESCDRRFSRSADLTRHIRI-HTG 29

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.5 bits (77), Expect = 8e-04
 Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 1/21 (4%)

Query: 59 CDKTFTRKDSLKKHIRIFHTQ 79
          CDK F R   L +H +  H +
Sbjct: 11 CDKAFVRNHDLIRHKKS-HQE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 31.5 bits (72), Expect = 0.004
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 107 ELCDKSFTRKDSLKKHNRI 125
             CDK+F R   L +H + 
Sbjct: 9   PGCDKAFVRNHDLIRHKKS 27

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (74), Expect = 0.001
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 105 RCELCDKSFTRKDSLKKHNRIFHG 128
           +CE+C K F+RKD LK H R   G
Sbjct: 3   KCEVCGKCFSRKDKLKTHMRCHTG 26

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 8/20 (40%), Positives = 11/20 (55%), Gaps = 1/20 (5%)

Query: 59 CDKTFTRKDSLKKHIRIFHT 78
          C+K F +  +LK HI   H 
Sbjct: 10 CNKKFAQSTNLKSHILT-HA 28

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (75), Expect = 0.001
 Identities = 8/23 (34%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHT 78
          C +C   FT K +  +H+++ HT
Sbjct: 10 CRICLSAFTTKANCARHLKV-HT 31

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.3 bits (71), Expect = 0.004
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 106 CELCDKSFTRKDSLKKHNRI 125
           C +C  +FT K +  +H ++
Sbjct: 10  CRICLSAFTTKANCARHLKV 29

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.2 bits (74), Expect = 0.002
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)

Query: 56 CTLCDKTFTRKDSLKKHIRIFHT 78
          C  C K F++   L  H RI HT
Sbjct: 5  CLECGKAFSQNSGLINHQRI-HT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 106 CELCDKSFTRKDSLKKHNRI 125
           C  C K+F++   L  H RI
Sbjct: 5   CLECGKAFSQNSGLINHQRI 24

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	167
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.76
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.44
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.43
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.39
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.34
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.33
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.31
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.24
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.24
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.23
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.22
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.21
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.19
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.17
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.16
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.16
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.14
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.12
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.11
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.1
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.07
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.99
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.96
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.96
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.95
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.95
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.94
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.87
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.85
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.85
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.84
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.79
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.78
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.73
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.71
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.68
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.67
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.66
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.61
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.59
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.55
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.43
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.39
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.32
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.28
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.18
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.16
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.13
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.1
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.0
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.0
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.98
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.97
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.96
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.93
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.78
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.73
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.73
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.72
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.72
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.7
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.65
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.61
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.6
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.57
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.55
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.54
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.53
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.5
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.45
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.43
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.43
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.42
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.33
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.23
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.22
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.02
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.99
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.95
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.89
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.84
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.79
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.79
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.77
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.77
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.76
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.72
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.56
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.53
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.37
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.28
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.95
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.86
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.78
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.53
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.47
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.29
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.25
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.12
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	95.05
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.01
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.75
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.36
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.02
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.83
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.75
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.57
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.42
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.29
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.16
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.04
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.96
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.01
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.48
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	90.06
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	87.65
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	87.18
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	86.38
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.98
d1fu9a_	36	U-shaped transcription factor, different fingers {	85.42
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	85.4
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.94
d1s24a_	56	Two-iron rubredoxin {Pseudomonas oleovorans [TaxId	84.5
d1brfa_	53	Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2	84.11
d1iroa_	53	Rubredoxin {Clostridium pasteurianum [TaxId: 1501]	82.83
d1wfka_	88	Zinc finger FYVE domain containing protein 19 {Mou	82.41
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	81.19
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	80.9
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	80.42

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.2e-19  Score=96.89  Aligned_cols=53  Identities=19%  Similarity=0.091  Sum_probs=50.8

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQMARGSADFLEVVLNED  154 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  154 (167)
                      +|+|.| .||+.|.....|..|+++|.+++||.|.+||+.|.....|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            578999 49999999999999999999999999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=4.7e-17  Score=87.55  Aligned_cols=53  Identities=34%  Similarity=0.682  Sum_probs=49.1

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCCCcccccchhhhhhccccccccCceecccccccccChhHHHHHHHhh
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~~~~~~~~~l~k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      |++|.|+ ||+.|.....|..|+ ++|++++|                     |.|.+||+.|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~-~~Ht~ekp---------------------y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRP---------------------YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHH-HHHSCCCS---------------------EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHh-hccccccC---------------------CcCCCcCCEecCHHHHHHHHhcC
Confidence            5799995 999999999999999 78999887                     78999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=4.2e-14  Score=69.81  Aligned_cols=36  Identities=25%  Similarity=0.397  Sum_probs=33.1

Q ss_pred             cCceecccccccccChhHHHHHHH-hhcCCCCCCCCc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNR-IFHGGADPKLMD  136 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~  136 (167)
                      +|+|.|.+||+.|.+.++|.+|++ +|.+++||+|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            678999999999999999999986 799999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.5e-14  Score=71.47  Aligned_cols=37  Identities=5%  Similarity=-0.181  Sum_probs=35.0

Q ss_pred             HHHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         121 KHNRIFHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       121 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      +|+++|.+++||.|.+|||+|...++|.+|+++|++|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4889999999999999999999999999999999885

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.6e-13  Score=67.63  Aligned_cols=38  Identities=34%  Similarity=0.605  Sum_probs=34.7

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHhcCCCCcccccc
Q psy8167          50 PIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV   87 (167)
Q Consensus        50 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~   87 (167)
                      .++||.|..||+.|.....|.+|++.+|++++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            35899999999999999999999967899999999864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2e-13  Score=66.43  Aligned_cols=34  Identities=9%  Similarity=0.045  Sum_probs=31.1

Q ss_pred             HhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         124 RIFHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       124 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      |+|++++||+|.+||++|.....|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5789999999999999999999999999999865

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=2e-13  Score=66.92  Aligned_cols=34  Identities=15%  Similarity=-0.031  Sum_probs=32.2

Q ss_pred             HHHhhcCCCCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         122 HNRIFHGGADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       122 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      |.|+|++++||+|.+|+++|....+|..|++.|-
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            6789999999999999999999999999999884

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3.1e-13  Score=64.10  Aligned_cols=33  Identities=12%  Similarity=-0.031  Sum_probs=28.3

Q ss_pred             hhcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         125 IFHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       125 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      +|++++||+|..||++|.....|..|+++|.+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478888999999999999999999999888775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=9e-13  Score=63.99  Aligned_cols=33  Identities=6%  Similarity=-0.028  Sum_probs=29.0

Q ss_pred             HhhcCCCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         124 RIFHGGADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       124 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      |+|+|++||+|.+|++.|....+|.+|++.+|.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            478999999999999999999999999876554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.24  E-value=2.3e-12  Score=59.33  Aligned_cols=27  Identities=33%  Similarity=0.789  Sum_probs=15.2

Q ss_pred             ceecccccccccChhHHHHHHHhhcCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      +|.|++||+.|.+.+.|.+|+++|+|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            455555555555555555555555554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=1.9e-12  Score=62.13  Aligned_cols=32  Identities=9%  Similarity=-0.238  Sum_probs=26.8

Q ss_pred             hcCCCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         126 FHGGADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       126 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      |+|++||+|.+|++.|....+|.+|+++|..+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            57888888888888888888888888888654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=2.9e-12  Score=58.28  Aligned_cols=28  Identities=32%  Similarity=0.744  Sum_probs=18.8

Q ss_pred             cCceecccccccccChhHHHHHHHhhcC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +|||.|.+||+.|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3566777777777777777777776654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.4e-12  Score=58.61  Aligned_cols=28  Identities=32%  Similarity=0.647  Sum_probs=17.6

Q ss_pred             CceecccccccccChhHHHHHHHhhcCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      |+|.|++||+.|.++++|.+|+++|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3566666666666666666666666655

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.19  E-value=5.5e-12  Score=58.01  Aligned_cols=29  Identities=7%  Similarity=-0.141  Sum_probs=27.5

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      +||+|.+|++.|.....|.+|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            59999999999999999999999999875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=2.7e-12  Score=58.40  Aligned_cols=28  Identities=7%  Similarity=-0.132  Sum_probs=26.4

Q ss_pred             CCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         129 GADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       129 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      |+||+|.+|++.|....+|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999965

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.1e-11  Score=59.95  Aligned_cols=33  Identities=30%  Similarity=0.416  Sum_probs=30.5

Q ss_pred             eeccc--ccccccChhHHHHHHHhhcCCCCCCCCc
Q psy8167         104 IRCEL--CDKSFTRKDSLKKHNRIFHGGADPKLMD  136 (167)
Q Consensus       104 ~~C~~--C~k~f~~~~~l~~H~~~h~~~~~~~C~~  136 (167)
                      |.|+.  ||+.|.++..|.+|+++|.+++||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67876  9999999999999999999999999973

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=2.4e-12  Score=63.37  Aligned_cols=26  Identities=38%  Similarity=0.816  Sum_probs=24.4

Q ss_pred             eecccccccccChhHHHHHHHhhcCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      |.|.+|||.|.+.++|..|+++|+||
T Consensus        13 y~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          13 YKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             EecCCCCceeeCHHHHHHhCccCCCC
Confidence            78999999999999999999999875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.1e-11  Score=56.94  Aligned_cols=29  Identities=7%  Similarity=-0.081  Sum_probs=27.4

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      +||.|.+||++|...++|.+|+++|.+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999874

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=2.4e-11  Score=57.42  Aligned_cols=33  Identities=27%  Similarity=0.380  Sum_probs=30.5

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      ++++++||.|..||+.|...+.|..|+ ++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~-r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhc-cccCCC
Confidence            478899999999999999999999999 889875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.8e-11  Score=54.20  Aligned_cols=25  Identities=32%  Similarity=0.708  Sum_probs=18.1

Q ss_pred             CceecccccccccChhHHHHHHHhh
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      |||+|.+|||.|.+++.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4677777777777777777777775

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=3.9e-11  Score=58.14  Aligned_cols=26  Identities=35%  Similarity=0.713  Sum_probs=24.1

Q ss_pred             eecccccccccChhHHHHHHHhhcCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      |.|.+||+.|.+++.|..|+++|+++
T Consensus         9 y~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           9 YACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             EECCCCCCCcCCHhHHHHhCcccCCC
Confidence            79999999999999999999998865

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.07  E-value=1.6e-12  Score=66.87  Aligned_cols=41  Identities=7%  Similarity=-0.134  Sum_probs=34.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCc--hhhhcCCHHHHHHHHhhcCCCC
Q psy8167         117 DSLKKHNRIFHGGADPKLMD--EQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       117 ~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      ..|..|++ |.+++||+|.+  |++.|...++|..|+++|.+++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            35666775 89999999988  9999999999999999998864

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=5.4e-11  Score=52.67  Aligned_cols=26  Identities=12%  Similarity=-0.192  Sum_probs=24.5

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      +||+|..|||+|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999883

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=1.9e-10  Score=54.98  Aligned_cols=32  Identities=25%  Similarity=0.472  Sum_probs=29.3

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      +++++||.|.+|++.|....+|.+|+ ++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~-r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHL-KVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHH-GGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHc-cccCCc
Confidence            56889999999999999999999999 889765

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=3e-10  Score=54.82  Aligned_cols=34  Identities=29%  Similarity=0.479  Sum_probs=30.5

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          47 PVVPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        47 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      ++.+++||.|.+|++.|....+|..|+++.|..+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            5789999999999999999999999997777653

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.9e-10  Score=52.95  Aligned_cols=26  Identities=12%  Similarity=-0.049  Sum_probs=14.3

Q ss_pred             CCCCCc--hhhhcCCHHHHHHHHhhcCC
Q psy8167         131 DPKLMD--EQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       131 ~~~C~~--C~~~f~~~~~l~~H~~~~~~  156 (167)
                      ||.|.+  |++.|...++|++|+++|.+
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            555555  55555555555555555554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2e-10  Score=52.92  Aligned_cols=28  Identities=36%  Similarity=0.732  Sum_probs=25.9

Q ss_pred             Cceeccc--ccccccChhHHHHHHHhhcCC
Q psy8167         102 DRIRCEL--CDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       102 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      |+|.|.+  ||+.|.+.++|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5789988  999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=1.1e-10  Score=56.87  Aligned_cols=25  Identities=36%  Similarity=0.676  Sum_probs=22.8

Q ss_pred             eecccccccccChhHHHHHHHhhcC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      |.|.+||+.|.++++|.+|+++|..
T Consensus        12 y~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_          12 FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             eEeCCCCCEecCHHHHHHHHhcCcC
Confidence            7889999999999999999999864

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.7e-10  Score=52.53  Aligned_cols=28  Identities=32%  Similarity=0.701  Sum_probs=18.6

Q ss_pred             Cceeccc--ccccccChhHHHHHHHhhcCC
Q psy8167         102 DRIRCEL--CDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       102 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      |+|.|.+  ||+.|.+.++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4566655  777777777777777776654

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=4e-10  Score=54.27  Aligned_cols=32  Identities=28%  Similarity=0.597  Sum_probs=29.6

Q ss_pred             ccccc--cccccCCHHHHHHHHHHhcCCCCccccc
Q psy8167          54 IPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTN   86 (167)
Q Consensus        54 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~   86 (167)
                      |.|+.  |+++|.....|.+|+ ++|++++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~-r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhcccc-CeeCCCCCEeCC
Confidence            77876  999999999999999 789999999886

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=2.8e-10  Score=52.48  Aligned_cols=28  Identities=4%  Similarity=-0.335  Sum_probs=26.2

Q ss_pred             CCCCCCc--hhhhcCCHHHHHHHHhhcCCC
Q psy8167         130 ADPKLMD--EQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       130 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      +||.|.+  |+++|.....|.+|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899998  999999999999999999875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=8.1e-10  Score=51.31  Aligned_cols=27  Identities=41%  Similarity=0.840  Sum_probs=13.7

Q ss_pred             ceecc--cccccccChhHHHHHHHhhcCC
Q psy8167         103 RIRCE--LCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       103 ~~~C~--~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      +|.|+  .||+.|.+.++|.+|+++|+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            34443  3555555555555555555444

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=9.4e-10  Score=51.09  Aligned_cols=29  Identities=7%  Similarity=-0.269  Sum_probs=26.6

Q ss_pred             CCCCCCc--hhhhcCCHHHHHHHHhhcCCCC
Q psy8167         130 ADPKLMD--EQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       130 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      +||.|++  |++.|....+|.+|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5899975  9999999999999999999874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=2.1e-09  Score=45.22  Aligned_cols=25  Identities=12%  Similarity=-0.121  Sum_probs=15.4

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      |++|..|++.|.++..|..|+|.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            4556666666666666666666554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.78  E-value=1.9e-09  Score=50.26  Aligned_cols=28  Identities=11%  Similarity=-0.250  Sum_probs=16.6

Q ss_pred             CCCCCCCc--hhhhcCCHHHHHHHHhhcCC
Q psy8167         129 GADPKLMD--EQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       129 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  156 (167)
                      ++||.|.+  |++.|.+.++|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            35566655  66666666666666666543

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=2.8e-09  Score=48.53  Aligned_cols=27  Identities=37%  Similarity=0.832  Sum_probs=16.1

Q ss_pred             Cceeccc--ccccccChhHHHHHHHhhcC
Q psy8167         102 DRIRCEL--CDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       102 k~~~C~~--C~k~f~~~~~l~~H~~~h~~  128 (167)
                      |+|.|.+  ||+.|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3456655  66666666666666666543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.71  E-value=2.9e-09  Score=54.40  Aligned_cols=29  Identities=21%  Similarity=0.548  Sum_probs=25.6

Q ss_pred             Cceeccc--ccccccChhHHHHHHHhhcCCC
Q psy8167         102 DRIRCEL--CDKSFTRKDSLKKHNRIFHGGA  130 (167)
Q Consensus       102 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~  130 (167)
                      ++|.|.+  ||+.|.+.++|..|+++|++++
T Consensus        17 kpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3478876  9999999999999999999875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=1.5e-09  Score=49.48  Aligned_cols=27  Identities=4%  Similarity=-0.292  Sum_probs=25.1

Q ss_pred             CCCCCCc--hhhhcCCHHHHHHHHhhcCC
Q psy8167         130 ADPKLMD--EQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       130 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~  156 (167)
                      +||+|.+  |++.|...++|.+|+++|.+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899998  99999999999999999864

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.67  E-value=7.6e-09  Score=48.18  Aligned_cols=28  Identities=29%  Similarity=0.630  Sum_probs=25.4

Q ss_pred             cCceeccc--ccccccChhHHHHHHHhhcC
Q psy8167         101 IDRIRCEL--CDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       101 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +++|.|.+  ||+.|.+.++|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            47899988  99999999999999999875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=6.8e-09  Score=43.62  Aligned_cols=26  Identities=50%  Similarity=0.942  Sum_probs=23.5

Q ss_pred             ceecccccccccChhHHHHHHHhhcC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +++|++|++.|+++..|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            36899999999999999999999764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=2.7e-09  Score=48.06  Aligned_cols=24  Identities=29%  Similarity=0.613  Sum_probs=11.7

Q ss_pred             ceeccc--ccccccChhHHHHHHHhh
Q psy8167         103 RIRCEL--CDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       103 ~~~C~~--C~k~f~~~~~l~~H~~~h  126 (167)
                      +|.|.+  |||.|.+.++|.+|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            444444  555555555555555443

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=6.9e-09  Score=46.66  Aligned_cols=26  Identities=4%  Similarity=-0.257  Sum_probs=24.4

Q ss_pred             CCCCCCc--hhhhcCCHHHHHHHHhhcC
Q psy8167         130 ADPKLMD--EQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       130 ~~~~C~~--C~~~f~~~~~l~~H~~~~~  155 (167)
                      +||.|++  |+|+|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899999  9999999999999999984

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=1.5e-08  Score=43.97  Aligned_cols=26  Identities=4%  Similarity=-0.372  Sum_probs=16.3

Q ss_pred             CCCCCCCchhhhcCCHHHHHHHHhhc
Q psy8167         129 GADPKLMDEQMARGSADFLEVVLNED  154 (167)
Q Consensus       129 ~~~~~C~~C~~~f~~~~~l~~H~~~~  154 (167)
                      ++||.|++||+.|.++...++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            35666666666666666666666655

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=6.3e-08  Score=41.98  Aligned_cols=27  Identities=30%  Similarity=0.752  Sum_probs=24.9

Q ss_pred             cCceecccccccccChhHHHHHHHhhc
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      ++||.|.+||+.|.+.....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478999999999999999999999975

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=5.5e-08  Score=42.79  Aligned_cols=29  Identities=3%  Similarity=-0.165  Sum_probs=20.1

Q ss_pred             CCCCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         129 GADPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       129 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      ++||.|++|+..|.++.-+.-|++.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46777777777777777777777776653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=7.7e-08  Score=43.30  Aligned_cols=30  Identities=7%  Similarity=-0.201  Sum_probs=16.7

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcCCCCCc
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDGEGEPV  160 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  160 (167)
                      ...|..||+.|.....|.+|...|.+++|.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            344555555555555555555555555553

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=2.7e-07  Score=41.46  Aligned_cols=32  Identities=25%  Similarity=0.510  Sum_probs=28.8

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCC
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPK  133 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~  133 (167)
                      +...|..|||.|.....|.+|.-.|.+++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            34679999999999999999999999999984

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2e-07  Score=40.06  Aligned_cols=28  Identities=18%  Similarity=-0.033  Sum_probs=18.3

Q ss_pred             CCCCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         129 GADPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       129 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      ++||+|..|.+.-..+++|..|++.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3566666666666666666666666654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4.4e-07  Score=38.76  Aligned_cols=24  Identities=8%  Similarity=-0.260  Sum_probs=12.7

Q ss_pred             CCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         133 KLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       133 ~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      .|..|||+|..++.|++|...|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            455555555555555555555544

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=7.1e-07  Score=39.16  Aligned_cols=29  Identities=31%  Similarity=0.603  Sum_probs=26.3

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      +++|.|++|+..|.++.-+.-|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47899999999999999999999998765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=9.9e-07  Score=37.84  Aligned_cols=29  Identities=21%  Similarity=0.391  Sum_probs=26.1

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      ++||+|+.|...-.+.+.|..|. +.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhl-r~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHL-RSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHH-TTCCSC
T ss_pred             CCcceeeecccccCCchheEEee-ecccCc
Confidence            47899999999999999999999 778874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.5e-06  Score=37.11  Aligned_cols=26  Identities=31%  Similarity=0.659  Sum_probs=23.7

Q ss_pred             eecccccccccChhHHHHHHHhhcCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      +-|..|||.|.-.+.|.+|.-.|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57999999999999999999998874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.00  E-value=1.6e-06  Score=35.87  Aligned_cols=24  Identities=8%  Similarity=-0.316  Sum_probs=19.5

Q ss_pred             CCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         132 PKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       132 ~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678888888888888888888763

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.5e-06  Score=38.09  Aligned_cols=25  Identities=4%  Similarity=-0.302  Sum_probs=12.6

Q ss_pred             CCCCCc--hhhhcCCHHHHHHHHhhcC
Q psy8167         131 DPKLMD--EQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       131 ~~~C~~--C~~~f~~~~~l~~H~~~~~  155 (167)
                      ||.|.+  |++++...++|+.|++.+|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            444544  5555555555555555433

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=3.2e-06  Score=36.42  Aligned_cols=26  Identities=31%  Similarity=0.406  Sum_probs=17.7

Q ss_pred             eecccccccccChhHHHHHHHhhcCC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      |-|++||......+-|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45677777777777777777776654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.4e-06  Score=37.02  Aligned_cols=26  Identities=15%  Similarity=-0.010  Sum_probs=20.5

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      +||+|..|++.-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57888888888888888888888764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=3.5e-06  Score=36.91  Aligned_cols=27  Identities=41%  Similarity=0.815  Sum_probs=23.5

Q ss_pred             Cceeccc--ccccccChhHHHHHHHhhcC
Q psy8167         102 DRIRCEL--CDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       102 k~~~C~~--C~k~f~~~~~l~~H~~~h~~  128 (167)
                      |+|.|.+  |+|.+...++|+.|++.+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677876  99999999999999998775

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=3.1e-06  Score=35.54  Aligned_cols=26  Identities=12%  Similarity=-0.072  Sum_probs=18.8

Q ss_pred             CCCchhhhcCCHHHHHHHHhhcCCCC
Q psy8167         133 KLMDEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       133 ~C~~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      +|+.|.+.|.++..|+.|-+.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777777777777777777777653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.78  E-value=5.6e-06  Score=38.97  Aligned_cols=29  Identities=14%  Similarity=-0.133  Sum_probs=22.8

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcCCCC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDGEGE  158 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  158 (167)
                      +.|.|.+|++.|.+...|-.|++.|..+.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            46888888888888888888888776543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.73  E-value=1.5e-05  Score=34.18  Aligned_cols=29  Identities=31%  Similarity=0.706  Sum_probs=26.0

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      +..|.|..|...|..+..|+.|| ..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hm-vshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHM-VSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-HHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeee-ecccCC
Confidence            46799999999999999999999 778874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=6.8e-06  Score=38.95  Aligned_cols=25  Identities=8%  Similarity=-0.285  Sum_probs=19.0

Q ss_pred             CCCCCCCCchhhhcCCHHHHHHHHh
Q psy8167         128 GGADPKLMDEQMARGSADFLEVVLN  152 (167)
Q Consensus       128 ~~~~~~C~~C~~~f~~~~~l~~H~~  152 (167)
                      |.+||.|.+|+|.|.....+.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            5677888888888888888777764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1e-05  Score=34.98  Aligned_cols=26  Identities=4%  Similarity=-0.029  Sum_probs=16.4

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      +||+|..|.+.....++|+.|+++.|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            46666666666666666666666544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.72  E-value=6e-06  Score=35.44  Aligned_cols=25  Identities=4%  Similarity=-0.277  Sum_probs=19.5

Q ss_pred             CCCCCCc--hhhhcCCHHHHHHHHhhc
Q psy8167         130 ADPKLMD--EQMARGSADFLEVVLNED  154 (167)
Q Consensus       130 ~~~~C~~--C~~~f~~~~~l~~H~~~~  154 (167)
                      .||+|+.  |++.|...+-|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3777776  888888888888888766

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.7e-05  Score=34.13  Aligned_cols=27  Identities=4%  Similarity=-0.042  Sum_probs=25.2

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      .|.|..||......+-|+.|++.|+++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCC
Confidence            488999999999999999999999876

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.8e-05  Score=37.45  Aligned_cols=24  Identities=33%  Similarity=0.778  Sum_probs=21.5

Q ss_pred             cCceecccccccccChhHHHHHHH
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNR  124 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~  124 (167)
                      .|||.|..|||.|-++..+.+|..
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhh
Confidence            367999999999999999999965

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=2.6e-05  Score=33.03  Aligned_cols=26  Identities=35%  Similarity=0.621  Sum_probs=24.1

Q ss_pred             CceecccccccccChhHHHHHHHhhc
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      ++|+|..|...-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999999999999999999974

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=3.9e-05  Score=33.11  Aligned_cols=29  Identities=24%  Similarity=0.536  Sum_probs=25.8

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      +||.|+.|.......++|..|++..|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            57999999999999999999998888654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.57  E-value=2e-05  Score=34.77  Aligned_cols=28  Identities=43%  Similarity=0.921  Sum_probs=25.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhcCCC
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      ||.|.+|++.|..+.-|.+|....|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6899999999999999999997778663

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.55  E-value=2.6e-05  Score=32.10  Aligned_cols=24  Identities=38%  Similarity=0.969  Sum_probs=21.9

Q ss_pred             eecccccccccChhHHHHHHHhhc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999999864

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=3.7e-05  Score=33.12  Aligned_cols=26  Identities=31%  Similarity=0.717  Sum_probs=16.8

Q ss_pred             ceecccccccccChhHHHHHHHhhcC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +|+|..|.....+.++|..|++..|+
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            56666666666666666666665554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.53  E-value=3.5e-05  Score=33.96  Aligned_cols=24  Identities=42%  Similarity=0.927  Sum_probs=13.2

Q ss_pred             eecccccccccChhHHHHHHHhhc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      |.|.+|++.|.++..|.+|...-|
T Consensus         2 f~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHTTTS
T ss_pred             cccccccchhhHHHHHHHHHHHHh
Confidence            555555556665555555554433

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.50  E-value=5e-05  Score=35.64  Aligned_cols=29  Identities=21%  Similarity=0.636  Sum_probs=25.7

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCCCC
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQ   81 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~   81 (167)
                      +.|.|.+|++.|.+-..|--|| ..|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~-~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHM-NVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHH-HTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchH-hhhcchH
Confidence            5699999999999999999999 7786654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=5.7e-05  Score=31.57  Aligned_cols=26  Identities=42%  Similarity=0.669  Sum_probs=23.9

Q ss_pred             ecccccccccChhHHHHHHHhhcCCC
Q psy8167         105 RCELCDKSFTRKDSLKKHNRIFHGGA  130 (167)
Q Consensus       105 ~C~~C~k~f~~~~~l~~H~~~h~~~~  130 (167)
                      .|+.|.+.|..+.-|..|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            59999999999999999999998874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=5.9e-05  Score=32.46  Aligned_cols=27  Identities=26%  Similarity=0.598  Sum_probs=24.4

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcC
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHT   78 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~   78 (167)
                      +||+|..|..--.+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            579999999999999999999977774

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=8e-05  Score=31.88  Aligned_cols=27  Identities=26%  Similarity=0.603  Sum_probs=19.8

Q ss_pred             ceecccccccccChhHHHHHHHhhcCC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      -|.|..|...|.++-.|+.||..|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            367777777777777777777776653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=4.2e-05  Score=32.85  Aligned_cols=22  Identities=36%  Similarity=0.800  Sum_probs=20.6

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIR   74 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~   74 (167)
                      ||.|..|+..|..+.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            5899999999999999999993

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=5.4e-05  Score=32.49  Aligned_cols=22  Identities=5%  Similarity=-0.150  Sum_probs=11.2

Q ss_pred             CCCCCchhhhcCCHHHHHHHHh
Q psy8167         131 DPKLMDEQMARGSADFLEVVLN  152 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~  152 (167)
                      ||.|..|..+|..+-+|..|++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            3445555555555555555554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.23  E-value=0.00016  Score=29.78  Aligned_cols=24  Identities=46%  Similarity=0.899  Sum_probs=20.4

Q ss_pred             eecccccccccChhHHHHHHHhhc
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      |.|+.|-+.|.++.++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            689999999999999999987644

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=9.3e-05  Score=31.38  Aligned_cols=25  Identities=12%  Similarity=-0.051  Sum_probs=17.7

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      |-+|+.|.++..++..|+.|.|+|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4467777777777777777777764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00016  Score=31.82  Aligned_cols=26  Identities=31%  Similarity=0.606  Sum_probs=16.4

Q ss_pred             Cceeccc--ccccccChhHHHHHH-Hhhc
Q psy8167         102 DRIRCEL--CDKSFTRKDSLKKHN-RIFH  127 (167)
Q Consensus       102 k~~~C~~--C~k~f~~~~~l~~H~-~~h~  127 (167)
                      ++|.|+.  |.|.|...+.--.|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3566655  777777777766675 5543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.99  E-value=0.00032  Score=29.94  Aligned_cols=24  Identities=33%  Similarity=0.772  Sum_probs=20.9

Q ss_pred             ceeccc--ccccccChhHHHHHHHhh
Q psy8167         103 RIRCEL--CDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       103 ~~~C~~--C~k~f~~~~~l~~H~~~h  126 (167)
                      +|.|+.  |++.|...+-|.+|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            577755  999999999999999886

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.95  E-value=0.00035  Score=28.62  Aligned_cols=23  Identities=26%  Similarity=0.636  Sum_probs=21.0

Q ss_pred             cccccccccccCCHHHHHHHHHH
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRI   75 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~   75 (167)
                      ||+|..|...|-.+..|+.||-.
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            68999999999999999999844

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.0002  Score=33.29  Aligned_cols=28  Identities=11%  Similarity=-0.096  Sum_probs=22.9

Q ss_pred             CCCCCCCCc--hhhhcCCHHHHHHHHhhcC
Q psy8167         128 GGADPKLMD--EQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       128 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~~  155 (167)
                      .++||.|..  |+..|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            367888866  8899999999988888775

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00059  Score=28.72  Aligned_cols=25  Identities=36%  Similarity=0.659  Sum_probs=19.1

Q ss_pred             ceecccccccccChhHHHHHHHhhc
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      +|.|+.|+....+++.|+.|++..|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3678888888888888888877544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.79  E-value=0.00046  Score=28.96  Aligned_cols=22  Identities=32%  Similarity=0.661  Sum_probs=20.2

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIR   74 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~   74 (167)
                      ||.|..||+.|-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999999973

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00034  Score=34.18  Aligned_cols=26  Identities=12%  Similarity=-0.238  Sum_probs=22.5

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcCC
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDGE  156 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~~  156 (167)
                      -|.|..|+|.|.....|+.|...|.-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            57899999999999999999988764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.00068  Score=27.74  Aligned_cols=22  Identities=27%  Similarity=0.659  Sum_probs=16.4

Q ss_pred             ceecccccccccChhHHHHHHH
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNR  124 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~  124 (167)
                      +|+|..|...|-++..|+.||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4677777777777777777764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.77  E-value=0.00028  Score=30.23  Aligned_cols=28  Identities=36%  Similarity=0.723  Sum_probs=24.0

Q ss_pred             Ccccccc--cccccCCHHHHHHHHHHhcCCC
Q psy8167          52 DRIPCTL--CDKTFTRKDSLKKHIRIFHTQN   80 (167)
Q Consensus        52 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~   80 (167)
                      +||.|..  |.+.|.....|.+|. ..|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs-~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHS-LTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHH-HHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhh-ccccCC
Confidence            4788875  999999999999998 778764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.76  E-value=0.00062  Score=27.97  Aligned_cols=24  Identities=50%  Similarity=1.094  Sum_probs=21.9

Q ss_pred             ccccccccccCCHHHHHHHHHHhc
Q psy8167          54 IPCTLCDKTFTRKDSLKKHIRIFH   77 (167)
Q Consensus        54 ~~C~~C~~~f~~~~~l~~H~~~~h   77 (167)
                      |.|+.|-+.|..+.++..|.+.+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999996666

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.72  E-value=0.00069  Score=28.98  Aligned_cols=27  Identities=30%  Similarity=0.625  Sum_probs=17.3

Q ss_pred             ceeccc--ccccccChhHHHHHHHhhcCC
Q psy8167         103 RIRCEL--CDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       103 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      +|.|..  |.|.|...-.|.+|.-+|+++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455543  667777777777776666553

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.56  E-value=0.0013  Score=27.59  Aligned_cols=20  Identities=35%  Similarity=0.826  Sum_probs=10.4

Q ss_pred             eecccccccccChhHHHHHH
Q psy8167         104 IRCELCDKSFTRKDSLKKHN  123 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~  123 (167)
                      |.|..||+.|.++.+|..|.
T Consensus         2 f~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHH
Confidence            44555555555555555543

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0011  Score=27.93  Aligned_cols=26  Identities=35%  Similarity=0.726  Sum_probs=23.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhcC
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHT   78 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~   78 (167)
                      .|.|+.|+-....++.|+.|++..|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            37899999999999999999977664

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.00063  Score=29.83  Aligned_cols=28  Identities=25%  Similarity=0.475  Sum_probs=23.6

Q ss_pred             Ccccccc--cccccCCHHHHHHHHHHhcCC
Q psy8167          52 DRIPCTL--CDKTFTRKDSLKKHIRIFHTQ   79 (167)
Q Consensus        52 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~   79 (167)
                      +||.|++  |.++|.+.+.-..|+.++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5789988  999999998888998677754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0026  Score=26.79  Aligned_cols=26  Identities=31%  Similarity=0.543  Sum_probs=22.9

Q ss_pred             ceecccccccccChhHHHHHHHhhcC
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      +-+|+.|.++.+.+..|+.|.|+|..
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            35799999999999999999999764

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.95  E-value=0.0026  Score=26.89  Aligned_cols=18  Identities=6%  Similarity=-0.106  Sum_probs=9.2

Q ss_pred             hhhhcCCHHHHHHHHhhc
Q psy8167         137 EQMARGSADFLEVVLNED  154 (167)
Q Consensus       137 C~~~f~~~~~l~~H~~~~  154 (167)
                      |.|.|...+.++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            455555555555555444

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0025  Score=28.82  Aligned_cols=24  Identities=25%  Similarity=0.300  Sum_probs=18.8

Q ss_pred             cccccccccChhHHHHHHHhhcCC
Q psy8167         106 CELCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       106 C~~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      |..=++.|..+..|..|||.|+++
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            455567788888999999998875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.0023  Score=28.64  Aligned_cols=25  Identities=0%  Similarity=-0.265  Sum_probs=17.0

Q ss_pred             CCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         131 DPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       131 ~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      .|.|..|+|.|.+...+.+|-....
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            3567777777777777777766543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.0063  Score=28.11  Aligned_cols=27  Identities=26%  Similarity=0.459  Sum_probs=22.8

Q ss_pred             cCceec--ccccccccChhHHHHHHHhhc
Q psy8167         101 IDRIRC--ELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       101 ~k~~~C--~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      .|+|.|  +-|+..|.....|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            466778  569999999999999988875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0071  Score=29.39  Aligned_cols=27  Identities=37%  Similarity=0.736  Sum_probs=23.6

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcCC
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHTQ   79 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~   79 (167)
                      ..|.|-.|++.|.....|+.|. ..|..
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HE-AQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHE-AQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHH-HHHTT
T ss_pred             ceeeccccccccCCHHHHhHhH-HhcCc
Confidence            5689999999999999999998 66754

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.29  E-value=0.0099  Score=25.25  Aligned_cols=25  Identities=24%  Similarity=0.453  Sum_probs=18.3

Q ss_pred             eecccccccccChhHHHHHHHhhcC
Q psy8167         104 IRCELCDKSFTRKDSLKKHNRIFHG  128 (167)
Q Consensus       104 ~~C~~C~k~f~~~~~l~~H~~~h~~  128 (167)
                      |.|..|||.......++-|+-..|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            6788888888888888777655443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.0062  Score=27.18  Aligned_cols=24  Identities=29%  Similarity=0.719  Sum_probs=20.9

Q ss_pred             ceecccccccccChhHHHHHHHhh
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h  126 (167)
                      .|-|..|||.|.++..+.+|...-
T Consensus         4 afvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeeecccccchhcchHHHHHhhhc
Confidence            378999999999999999997653

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.12  E-value=0.007  Score=29.32  Aligned_cols=26  Identities=8%  Similarity=-0.230  Sum_probs=12.9

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      .|-.|++|+.....+.+|++|+.--|
T Consensus        23 qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            34445555555555555555554433

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.05  E-value=0.01  Score=26.59  Aligned_cols=30  Identities=17%  Similarity=0.438  Sum_probs=25.6

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHhcCC
Q psy8167          50 PIDRIPCTLCDKTFTRKDSLKKHIRIFHTQ   79 (167)
Q Consensus        50 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~   79 (167)
                      ++..|+|..|.+.+...+++-+|....|..
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            345799999999999999999999777743

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.01  E-value=0.0041  Score=25.89  Aligned_cols=18  Identities=17%  Similarity=-0.106  Sum_probs=13.2

Q ss_pred             hhhhcCCHHHHHHHHhhc
Q psy8167         137 EQMARGSADFLEVVLNED  154 (167)
Q Consensus       137 C~~~f~~~~~l~~H~~~~  154 (167)
                      |++.|....+|+.|+-.|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            777777777777777655

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.0054  Score=27.69  Aligned_cols=24  Identities=13%  Similarity=-0.032  Sum_probs=19.7

Q ss_pred             CCchhhhcCCHHHHHHHHhhcCCC
Q psy8167         134 LMDEQMARGSADFLEVVLNEDGEG  157 (167)
Q Consensus       134 C~~C~~~f~~~~~l~~H~~~~~~~  157 (167)
                      |..=++.|.....|..|+|+|+++
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            334467899999999999999875

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.013  Score=24.60  Aligned_cols=19  Identities=26%  Similarity=0.517  Sum_probs=17.3

Q ss_pred             cccccccChhHHHHHHHhh
Q psy8167         108 LCDKSFTRKDSLKKHNRIF  126 (167)
Q Consensus       108 ~C~k~f~~~~~l~~H~~~h  126 (167)
                      -|+|.|...+.++.|+-+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            4999999999999999885

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.02  E-value=0.035  Score=26.78  Aligned_cols=31  Identities=16%  Similarity=0.356  Sum_probs=25.7

Q ss_pred             cCceecccccccccChhHHHHHHHhhcCCCC
Q psy8167         101 IDRIRCELCDKSFTRKDSLKKHNRIFHGGAD  131 (167)
Q Consensus       101 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~  131 (167)
                      +.+-.|+.|+-...+..+|++|+..-|=.+|
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            5667899999999999999999987664443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.044  Score=23.17  Aligned_cols=25  Identities=24%  Similarity=0.488  Sum_probs=21.6

Q ss_pred             cccccccccccCCHHHHHHHHHHhc
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFH   77 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h   77 (167)
                      .|.|..||+...+...+.-|...-|
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            4899999999999999999985555

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.016  Score=30.86  Aligned_cols=20  Identities=5%  Similarity=-0.139  Sum_probs=10.0

Q ss_pred             CCCCchhhhcCCHHHHHHHH
Q psy8167         132 PKLMDEQMARGSADFLEVVL  151 (167)
Q Consensus       132 ~~C~~C~~~f~~~~~l~~H~  151 (167)
                      |-|..|++.|.+...|..|+
T Consensus        16 fYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHT
T ss_pred             EecccccCccCCHHHHHHHH
Confidence            44555555555555555444

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.57  E-value=0.038  Score=24.29  Aligned_cols=22  Identities=27%  Similarity=0.600  Sum_probs=20.2

Q ss_pred             CcccccccccccCCHHHHHHHH
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHI   73 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~   73 (167)
                      ..|.|.-||-.|.+.+.|..|+
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            4599999999999999999997

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.42  E-value=0.066  Score=23.83  Aligned_cols=25  Identities=24%  Similarity=0.622  Sum_probs=20.8

Q ss_pred             ceecccccccccChhHHHHHHHhhc
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRIFH  127 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~h~  127 (167)
                      -|+|.+|.+.+..-+++-+|--+.|
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhc
Confidence            3889999999999999999876544

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.29  E-value=0.042  Score=24.14  Aligned_cols=23  Identities=26%  Similarity=0.593  Sum_probs=18.6

Q ss_pred             ceecccccccccChhHHHHHHHh
Q psy8167         103 RIRCELCDKSFTRKDSLKKHNRI  125 (167)
Q Consensus       103 ~~~C~~C~k~f~~~~~l~~H~~~  125 (167)
                      +|-|.-||-.|+..+.|..|+..
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            46788899999999888888653

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.16  E-value=0.029  Score=26.05  Aligned_cols=11  Identities=9%  Similarity=-0.372  Sum_probs=6.2

Q ss_pred             CCCCCCCCchh
Q psy8167         128 GGADPKLMDEQ  138 (167)
Q Consensus       128 ~~~~~~C~~C~  138 (167)
                      ++.|-.|++|+
T Consensus        17 g~~P~~CPvCg   27 (37)
T d1nnqa2          17 DEAPEYCPVCG   27 (37)
T ss_dssp             SCCCSBCTTTC
T ss_pred             CCCCCcCCCCC
Confidence            34455666664

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.04  E-value=0.021  Score=30.33  Aligned_cols=23  Identities=26%  Similarity=0.475  Sum_probs=20.9

Q ss_pred             CCcccccccccccCCHHHHHHHH
Q psy8167          51 IDRIPCTLCDKTFTRKDSLKKHI   73 (167)
Q Consensus        51 ~~~~~C~~C~~~f~~~~~l~~H~   73 (167)
                      ...|.|..|++.|.+...|..|+
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHT
T ss_pred             CCEEecccccCccCCHHHHHHHH
Confidence            35699999999999999999998

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.96  E-value=0.094  Score=22.51  Aligned_cols=22  Identities=18%  Similarity=0.357  Sum_probs=14.9

Q ss_pred             cccccccChhHHHHHHHhhcCC
Q psy8167         108 LCDKSFTRKDSLKKHNRIFHGG  129 (167)
Q Consensus       108 ~C~k~f~~~~~l~~H~~~h~~~  129 (167)
                      .|+-.|.....|..|+-.|+|+
T Consensus        10 dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          10 DCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GGCCEESSHHHHHHHHHHHHCC
T ss_pred             CcchhhccchhhhHHhhhhcCC
Confidence            4667777777777777766653

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.01  E-value=0.018  Score=29.93  Aligned_cols=26  Identities=15%  Similarity=-0.058  Sum_probs=18.5

Q ss_pred             CCCCCCchhhhcCCHHHHHHHHhhcC
Q psy8167         130 ADPKLMDEQMARGSADFLEVVLNEDG  155 (167)
Q Consensus       130 ~~~~C~~C~~~f~~~~~l~~H~~~~~  155 (167)
                      .-|+|..|+-.|.+-..|..|+..|+
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            45777777777777777777776554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.48  E-value=0.041  Score=28.67  Aligned_cols=34  Identities=12%  Similarity=0.185  Sum_probs=19.3

Q ss_pred             CceecccccccccChhHHHHHHHhhcCCCCCCCCchh
Q psy8167         102 DRIRCELCDKSFTRKDSLKKHNRIFHGGADPKLMDEQ  138 (167)
Q Consensus       102 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~  138 (167)
                      ..|.|+.|++.|.....++-   .-...-.|.|..|+
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~   46 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCH   46 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSC
T ss_pred             CceECCCCCCCcchhhHHHh---cCcCCCeEEecCCC
Confidence            44677777777766655432   11223356677765

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.06  E-value=0.062  Score=24.70  Aligned_cols=11  Identities=18%  Similarity=-0.287  Sum_probs=6.0

Q ss_pred             CCCCCCCCchh
Q psy8167         128 GGADPKLMDEQ  138 (167)
Q Consensus       128 ~~~~~~C~~C~  138 (167)
                      ++.|-+|++|+
T Consensus        17 g~~Pe~CPvCg   27 (36)
T d1yuza2          17 GEDFEKCPICF   27 (36)
T ss_dssp             SSCCSBCTTTC
T ss_pred             CCCCCcCCCCC
Confidence            34455566664

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=87.65  E-value=0.12  Score=25.01  Aligned_cols=10  Identities=30%  Similarity=0.740  Sum_probs=5.7

Q ss_pred             cCceeccccc
Q psy8167         101 IDRIRCELCD  110 (167)
Q Consensus       101 ~k~~~C~~C~  110 (167)
                      ...|.|++||
T Consensus        27 P~dw~CP~C~   36 (45)
T d6rxna_          27 PDDWCCPVCG   36 (45)
T ss_dssp             CTTCBCTTTC
T ss_pred             CCCCCCcCCC
Confidence            3445666665

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.18  E-value=0.3  Score=20.42  Aligned_cols=22  Identities=23%  Similarity=0.516  Sum_probs=17.5

Q ss_pred             cccccccCCHHHHHHHHHHhcC
Q psy8167          57 TLCDKTFTRKDSLKKHIRIFHT   78 (167)
Q Consensus        57 ~~C~~~f~~~~~l~~H~~~~h~   78 (167)
                      +-||+.|.++..|.-|.+-.|.
T Consensus         6 ~gc~kifsnrqylnhh~kyqh~   27 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQHI   27 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGGG
T ss_pred             CCchhhhccHHHHHhHHHHHHh
Confidence            4599999999999888755453

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.38  E-value=0.12  Score=29.81  Aligned_cols=25  Identities=20%  Similarity=0.343  Sum_probs=11.6

Q ss_pred             cccccchhhhhhccccccccCceeccccc
Q psy8167          82 PQHTNVIEVALGARANAAFIDRIRCELCD  110 (167)
Q Consensus        82 ~~~c~~c~~~~~~~~~~~l~k~~~C~~C~  110 (167)
                      |-.|..||+.|..    .+.++-+|+.|.
T Consensus        67 Pp~CrkCGfvFr~----~~kkPSRCP~CK   91 (105)
T d2gmga1          67 PAQCRKCGFVFKA----EINIPSRCPKCK   91 (105)
T ss_dssp             CCBBTTTCCBCCC----CSSCCSSCSSSC
T ss_pred             ChhhhhcCCeecc----cCCCCCCCCCCC
Confidence            4455555555522    234444555554

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.98  E-value=0.2  Score=21.07  Aligned_cols=22  Identities=5%  Similarity=-0.114  Sum_probs=14.0

Q ss_pred             CCCCc--hhhhcCCHHHHHHHHhh
Q psy8167         132 PKLMD--EQMARGSADFLEVVLNE  153 (167)
Q Consensus       132 ~~C~~--C~~~f~~~~~l~~H~~~  153 (167)
                      +.|+.  |+-.|..+.+++.|...
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHH
T ss_pred             ccccCCCcceEEeehHHHHHHHhh
Confidence            44543  67777777777777654

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.42  E-value=0.34  Score=21.69  Aligned_cols=19  Identities=32%  Similarity=0.676  Sum_probs=11.0

Q ss_pred             cccccccccChhHHHHHHH
Q psy8167         106 CELCDKSFTRKDSLKKHNR  124 (167)
Q Consensus       106 C~~C~k~f~~~~~l~~H~~  124 (167)
                      |..|.-.|...+.+..|.+
T Consensus        11 C~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_          11 CSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             ETTTTEECSSHHHHHHHHH
T ss_pred             HhhCCceehhHHHHHHHHH
Confidence            5556556666666555544

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.94  E-value=0.5  Score=24.31  Aligned_cols=26  Identities=23%  Similarity=0.577  Sum_probs=23.2

Q ss_pred             CcccccccccccCCHHHHHHHHHHhcC
Q psy8167          52 DRIPCTLCDKTFTRKDSLKKHIRIFHT   78 (167)
Q Consensus        52 ~~~~C~~C~~~f~~~~~l~~H~~~~h~   78 (167)
                      ..|.|.+|.-.|.....|..|. ..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl-~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHL-NIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHH-HHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHH-Hhcc
Confidence            5699999999999999999999 6674

>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Two-iron rubredoxin
species: Pseudomonas oleovorans [TaxId: 301]

Probab=84.50  E-value=0.15  Score=25.89  Aligned_cols=10  Identities=30%  Similarity=0.547  Sum_probs=5.3

Q ss_pred             cCceeccccc
Q psy8167         101 IDRIRCELCD  110 (167)
Q Consensus       101 ~k~~~C~~C~  110 (167)
                      ...|.|++||
T Consensus        35 P~dw~CP~C~   44 (56)
T d1s24a_          35 PDDWCCPDCG   44 (56)
T ss_dssp             CTTCCCSSSC
T ss_pred             CCCCCCcCCC
Confidence            3445566665

>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.11  E-value=0.15  Score=25.51  Aligned_cols=10  Identities=30%  Similarity=0.780  Sum_probs=5.5

Q ss_pred             cCceeccccc
Q psy8167         101 IDRIRCELCD  110 (167)
Q Consensus       101 ~k~~~C~~C~  110 (167)
                      ...|.|++|+
T Consensus        33 P~dw~CP~C~   42 (53)
T d1brfa_          33 PDDWVCPICG   42 (53)
T ss_dssp             CTTCBCTTTC
T ss_pred             CCCCCCcCCC
Confidence            3445666665

>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.83  E-value=0.2  Score=25.06  Aligned_cols=10  Identities=40%  Similarity=0.820  Sum_probs=5.5

Q ss_pred             cCceeccccc
Q psy8167         101 IDRIRCELCD  110 (167)
Q Consensus       101 ~k~~~C~~C~  110 (167)
                      ...|.|++||
T Consensus        34 P~dw~CP~C~   43 (53)
T d1iroa_          34 PDDWVCPLCG   43 (53)
T ss_dssp             CTTCBCTTTC
T ss_pred             CCCCCCcCCC
Confidence            3445566665

>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Zinc finger FYVE domain containing protein 19
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.41  E-value=0.35  Score=26.88  Aligned_cols=12  Identities=33%  Similarity=0.612  Sum_probs=6.9

Q ss_pred             cccccccccccC
Q psy8167          53 RIPCTLCDKTFT   64 (167)
Q Consensus        53 ~~~C~~C~~~f~   64 (167)
                      .-.|..|++.|.
T Consensus         9 ~s~C~~C~~~Fs   20 (88)
T d1wfka_           9 ESRCYGCAVKFT   20 (88)
T ss_dssp             CSBCTTTCCBCC
T ss_pred             cCcCcccCchhc
Confidence            345666666663

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.19  E-value=0.78  Score=20.41  Aligned_cols=27  Identities=30%  Similarity=0.521  Sum_probs=23.2

Q ss_pred             cccccccccccCCHHHHHHHHHHhcCC
Q psy8167          53 RIPCTLCDKTFTRKDSLKKHIRIFHTQ   79 (167)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   79 (167)
                      ...|-.|-+.|+....+.+|+...|..
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnq   29 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQ   29 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheeccc
Confidence            367999999999999999999777754

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.90  E-value=1  Score=26.53  Aligned_cols=31  Identities=23%  Similarity=0.541  Sum_probs=25.6

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHhcC
Q psy8167          48 VVPIDRIPCTLCDKTFTRKDSLKKHIRIFHT   78 (167)
Q Consensus        48 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~   78 (167)
                      ..+..+-.|-.|.+.|.....+..|++..|.
T Consensus        10 ~~e~~~~~CLFCd~~f~s~~~~l~H~k~~H~   40 (121)
T d1wira_          10 AHGRQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCCcccceecccCCccCCHHHHHHHHHHhhC
Confidence            3344667899999999999999999977773

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.42  E-value=1.6  Score=21.30  Aligned_cols=32  Identities=25%  Similarity=0.460  Sum_probs=26.7

Q ss_pred             CCcccccc--cccccCCHHHHHHHHHHhcCCCCc
Q psy8167          51 IDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQP   82 (167)
Q Consensus        51 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~   82 (167)
                      -+||.|-.  |..+|.-..+|..|.+..|....|
T Consensus        18 yrpyrcvhqgc~aaftiq~nlilhy~avh~s~lp   51 (61)
T d1x3ca1          18 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP   51 (61)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred             CCceeeeccchhhhhhhhhhHHHHHHHHhhhcCc
Confidence            47899965  889999999999999888866543