Psyllid ID: psy8183

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAALENPHYWPKVSPDTANNLSMGLPHHQHHLNHHQAYLPYNTISFPGKVMQQSSGPNTPVSVAVSNSFPNQLISLHQIRNYAHQPGSTLMPGEHILAGLTKDK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHEHHHHccccccEEccccccccEEccHHHHHHHHHHHHccccccccccccEEccHHHHHHHHHHHHccccEEccccccccccEccccHHHHHccccccccccEcccccccEccHHHcHHcccccccEcccccccEcccccccEEccccccccccHHccccEccccHHHHHHHHcccccccccHHEEEEEEcccccccEccccccEEEEcccccc
Coil and Loop (DISEMBL)
MDLAGQELTMEIRRthtgdkpykcrhpgcvkafsqlsnlqshsrchqtdkpykcnscykcfvdetallehipkhkdskhlKTHICQycgksytqeTYLSKHMQKhaersdkrppiigipraalenphywpkvspdtannlsmglphhqhhlnhhqaylpyntisfpgkvmqqssgpntpvsVAVSNSFPNQLISLHQIRnyahqpgstlmpgehilagltkdk
Flexible Loop (DISEMBL)
MDLAGQELTMEirrthtgdkpykCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEhipkhkdskhlKTHICQYCGKSYTQETYLSKHMQKhaersdkrppIIGIPRAALENPHYWPKVSPDTANNLSMGLPHHQHHLNHHQAYLPYNTISFPGKVMQQSSGPNTPVSVAVSNSFPNQLISLHQIRNYAHQPGSTLMPGEHILAGLTKDK
Low Complexity Region (SEG)
MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAALENPHYWPKVSPDTANNLSMGLPhhqhhlnhhqAYLPYNTISFPGKVMQQSSGPNTPVSVAVSNSFPNQLISLHQIRNYAHQPGSTLMPGEHILAGLTKDK
Disordered region (IsUnstruct)
*********************YKCRHPGCVKAFSQLSNLQ*HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYL*****************IGIPRAALENPHYWPKV***********LPHHQHHLNHHQAYLPYNTISFP***********************NQLISLHQIRNYA*********************
Disordered Region (DISOPRED)
*D***QELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAALENPHYWPKVSPDTANNLSMGLPHHQHHLNHHQAYLPYNTISFPGKVMQQSSGPNTPVSVAVSNSFPNQLISLHQIRNYAHQPGSTLMPGEHILAG*****
Disordered Region (DISEMBL)
MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYL************KRPPIIGIPRAALENPHYWPKVSPDTANNLSMGLPHHQHHLNHHQAYLPYNTISFPGKV**********VSVAVSNSFPNQLISLHQIRNYAHQPGSTLMPGEHILAGLTKDK
Disordered Region (DISPRO)
*****QELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAALENPHYWPKVSPDTANNLSMGLPHHQHHLNHHQAYLPYNTISFPGKVMQQSSGPNTPVSVAVSNSFPNQLISLHQIRNYAHQPGSTLMPGEHILAG*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAALENPHYWPKVSPDTANNLSMGLPHHQHHLNHHQAYLPYNTISFPGKVMQQSSGPNTPVSVAVSNSFPNQLISLHQIRNYAHQPGSTLMPGEHILAGLTKDK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	223	2.2.26 [Sep-21-2011]
Q9VI93	946	Zinc finger protein rotun	no	N/A	0.556	0.131	0.636	3e-54
Q293Q2	550	Zinc finger protein squee	no	N/A	0.556	0.225	0.666	2e-48
Q9VDZ3	535	Zinc finger protein squee	no	N/A	0.556	0.231	0.666	5e-48
Q5T0B9	420	Zinc finger protein 362 O	yes	N/A	0.408	0.216	0.597	3e-26
Q9EQJ4	579	Zinc finger protein 384 O	no	N/A	0.408	0.157	0.565	5e-25
Q8TF68	577	Zinc finger protein 384 O	no	N/A	0.408	0.157	0.565	7e-25
A3KN32	543	Zinc finger protein 34 OS	no	N/A	0.394	0.162	0.473	4e-16
Q8IZ26	560	Zinc finger protein 34 OS	no	N/A	0.399	0.158	0.457	8e-16
Q9NW07	568	Zinc finger protein 358 O	no	N/A	0.408	0.160	0.427	2e-15
Q9BUY5	554	Zinc finger protein 426 O	no	N/A	0.443	0.178	0.413	8e-15

>sp|Q9VI93|RN_DROME Zinc finger protein rotund OS=Drosophila melanogaster GN=rn PE=1 SV=2

 Score =  211 bits (537), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 105/165 (63%), Positives = 116/165 (70%), Gaps = 41/165 (24%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKP+KCNSCYKCF DE +LLEHIPK
Sbjct: 565 RTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEPSLLEHIPK 624

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPII----------------- 116
           HK+SKHLKTHICQYCGKSYTQETYL+KHMQKHAER+DKRPPI+                 
Sbjct: 625 HKESKHLKTHICQYCGKSYTQETYLTKHMQKHAERTDKRPPIVPGSAAAIAAAAAAAAGG 684

Query: 117 ----------------------GIPRAAL--ENPHYWPKVSPDTA 137
                                 G+P  ++   +  YWPKVSPD+A
Sbjct: 685 SANPANGPPPPPNPAQHQRNNLGLPPVSIAPSDNGYWPKVSPDSA 729

Transcription factor involved in imaginal disks development. Isoform rn is required in the wings, antenna, haltere, proboscis and legs disks, while isoform roe is required in the eye disk. Together with nab corepressor, it is involved in the initiation and maintenance of wingless (wg) expression in the wing hinge, by limiting the expression of wg to this compartment. Also required for the epithelial-mesenchymal transition branch of basolateral junctions signaling.
Drosophila melanogaster (taxid: 7227)

>sp|Q293Q2|SQZ_DROPS Zinc finger protein squeeze OS=Drosophila pseudoobscura pseudoobscura GN=sqz PE=3 SV=2

 Score =  191 bits (486), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/144 (66%), Positives = 105/144 (72%), Gaps = 20/144 (13%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRH GC KAFSQLSNLQSHSRCHQTDKP+KCNSCYKCF DE  LLEHIPK
Sbjct: 230 RTHTGDKPYKCRHAGCPKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFADEMTLLEHIPK 289

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRP--------------PIIGI- 118
           HKDSKHLKTHIC  CGKSYTQETYL KH+QKHAE+++K+               P  GI 
Sbjct: 290 HKDSKHLKTHICNLCGKSYTQETYLQKHLQKHAEKAEKQQQRHSSQVAAVQQHVPSGGIG 349

Query: 119 ---PRAALE--NPHYWPKVSPDTA 137
               R A+   N  YW K+  D+A
Sbjct: 350 LNLQRQAMNDVNAAYWAKMGADSA 373

Transcription factor involved in neuronal fate specification. First required in embryonic CNS development to define the number of cells that express apterous (ap) in the ap thoracic cluster of interneurons. Later on, it plays a central role in the combinatorial code of transcription factors that specifies the fate of the Tv neuron in the ap cluster by participating in the transcription regulation of FMRFa in Tv cells. Also required for projection neuron dendritic targeting.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|Q9VDZ3|SQZ_DROME Zinc finger protein squeeze OS=Drosophila melanogaster GN=sqz PE=1 SV=2

 Score =  190 bits (483), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/144 (66%), Positives = 105/144 (72%), Gaps = 20/144 (13%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRH GC KAFSQLSNLQSHSRCHQTDKP+KCNSCYKCF DE  LLEHIPK
Sbjct: 206 RTHTGDKPYKCRHAGCPKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEMTLLEHIPK 265

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRP--------------PIIGI- 118
           HKDSKHLKTHIC  CGKSYTQETYL KH+QKHAE+++K+               P  GI 
Sbjct: 266 HKDSKHLKTHICNLCGKSYTQETYLQKHLQKHAEKAEKQQHRHTAQVAAHQQHVPASGIG 325

Query: 119 ---PRAALE--NPHYWPKVSPDTA 137
               R A+   N  YW K+  D+A
Sbjct: 326 LNLQRQAMNDVNAAYWAKMGADSA 349

Transcription factor involved in neuronal fate specification. First required in embryonic CNS development to define the number of cells that express apterous (ap) in the ap thoracic cluster of interneurons. Later on, it plays a central role in the combinatorial code of transcription factors that specifies the fate of the Tv neuron in the ap cluster by participating in the transcription regulation of FMRFa in Tv cells. Also required for projection neuron dendritic targeting.

Drosophila melanogaster (taxid: 7227)

>sp|Q5T0B9|ZN362_HUMAN Zinc finger protein 362 OS=Homo sapiens GN=ZNF362 PE=1 SV=1

 Score =  118 bits (296), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 65/92 (70%), Gaps = 1/92 (1%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKPYKC +CY+ + D  +L  H+  
Sbjct: 303 RIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSA 362

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
           H   KH K + C  CG++YT ETYL KHM KH
Sbjct: 363 HAI-KHAKAYCCSMCGRAYTSETYLMKHMSKH 393

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9EQJ4|ZN384_RAT Zinc finger protein 384 OS=Rattus norvegicus GN=Znf384 PE=1 SV=1

 Score =  114 bits (285), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 1/92 (1%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKP+KC++C++ + D  +L  H+  
Sbjct: 366 RIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAASLEAHLST 425

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
           H   KH K + C  C ++YT ETYL KHM+KH
Sbjct: 426 H-TVKHAKVYTCTICSRAYTSETYLMKHMRKH 456

Transcription factor that binds the consensus DNA sequence [GC]AAAAA. Seems to bind and regulate the promoters of MMP1, MMP3, MMP7 and COL1A1.

Rattus norvegicus (taxid: 10116)

>sp|Q8TF68|ZN384_HUMAN Zinc finger protein 384 OS=Homo sapiens GN=ZNF384 PE=1 SV=2

 Score =  114 bits (284), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 1/92 (1%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKP+KC++C++ + D  +L  H+  
Sbjct: 365 RIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAASLEVHLST 424

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
           H   KH K + C  C ++YT ETYL KHM+KH
Sbjct: 425 H-TVKHAKVYTCTICSRAYTSETYLMKHMRKH 455

Transcription factor that binds the consensus DNA sequence [GC]AAAAA. Seems to bind and regulate the promoters of MMP1, MMP3, MMP7 and COL1A1.

Homo sapiens (taxid: 9606)

>sp|A3KN32|ZNF34_BOVIN Zinc finger protein 34 OS=Bos taurus GN=ZNF34 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 5/93 (5%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
           RRTHTG+KPY+C+   C K F+Q SNL  H R H  +KPYKCN C K F+ +T L+EH  
Sbjct: 365 RRTHTGEKPYECKE--CGKGFTQSSNLIQHQRIHTGEKPYKCNECEKAFIQKTKLVEHQR 422

Query: 73  KHKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
            H      K + C  CGK ++Q T+L +H + H
Sbjct: 423 SHTGE---KPYECNDCGKVFSQSTHLIQHQRIH 452

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q8IZ26|ZNF34_HUMAN Zinc finger protein 34 OS=Homo sapiens GN=ZNF34 PE=1 SV=3

 Score = 84.0 bits (206), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 5/94 (5%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
           RRTHTG+KP++C+   C K F+Q SNL  H R H  +KPYKCN C K F+ +T L+EH  
Sbjct: 382 RRTHTGEKPFECKE--CGKGFTQSSNLIQHQRIHTGEKPYKCNECEKAFIQKTKLVEHQR 439

Query: 73  KHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHA 106
            H      K + C  CGK ++Q T+L +H + H 
Sbjct: 440 SHTGE---KPYECNDCGKVFSQSTHLIQHQRIHT 470

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9NW07|ZN358_HUMAN Zinc finger protein 358 OS=Homo sapiens GN=ZNF358 PE=1 SV=2

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 5/96 (5%)

Query: 10  MEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLE 69
           ++ +RTHT ++PY+C H  C KAF Q SNLQ H R H  ++PY C  C K F   +ALL+
Sbjct: 307 LQHQRTHTAERPYRCPH--CGKAFGQSSNLQHHLRIHTGERPYACPHCSKAFGQSSALLQ 364

Query: 70  HIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
           H+  H   +  +   CQ CGK++ Q + L+KH + H
Sbjct: 365 HLHVHSGERPYR---CQLCGKAFGQASSLTKHKRVH 397

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9BUY5|ZN426_HUMAN Zinc finger protein 426 OS=Homo sapiens GN=ZNF426 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 5/104 (4%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTG+KPY C+   C KAF+Q S L  H R H  DKPY+C  C K F+  + L++HI  
Sbjct: 328 RTHTGEKPYVCKE--CGKAFTQYSGLSMHVRSHSGDKPYECKECGKSFLTSSRLIQHIRT 385

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIG 117
           H   K     +C  CGK++   + LS H++ H E       I G
Sbjct: 386 HTGEKPF---VCVECGKAFAVSSNLSGHLRTHTEEKACECKICG 426

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
189242001	593	PREDICTED: similar to rotund CG32466-PA	0.928	0.349	0.552	2e-66
270015655	401	hypothetical protein TcasGA2_TC016018 [T	0.928	0.516	0.552	4e-66
328723334	962	PREDICTED: hypothetical protein LOC10016	0.515	0.119	0.905	1e-64
48098088	450	PREDICTED: zinc finger protein squeeze i	0.627	0.311	0.773	7e-59
332020730	368	Zinc finger protein rotund [Acromyrmex e	0.645	0.391	0.759	1e-58
383854662	451	PREDICTED: zinc finger protein squeeze-l	0.627	0.310	0.766	2e-58
328782755	451	PREDICTED: zinc finger protein squeeze i	0.672	0.332	0.734	2e-58
340724596	633	PREDICTED: hypothetical protein LOC10064	0.627	0.221	0.773	2e-58
307190491	449	Zinc finger protein 362 [Camponotus flor	0.627	0.311	0.766	2e-58
350397896	519	PREDICTED: zinc finger protein squeeze-l	0.645	0.277	0.759	2e-58

>gi|189242001|ref|XP_971187.2| PREDICTED: similar to rotund CG32466-PA [Tribolium castaneum]

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/268 (55%), Positives = 166/268 (61%), Gaps = 61/268 (22%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF DE +LLEHIPK
Sbjct: 329 RTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFSDEPSLLEHIPK 388

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPI---IGIPRAALENPHYWP 130
           HK+SKHLKTHICQYCGKSYTQETYLSKHMQKHAER+DKRPPI   +G+    LE+P YWP
Sbjct: 389 HKESKHLKTHICQYCGKSYTQETYLSKHMQKHAERTDKRPPIGPALGLNHRGLEHP-YWP 447

Query: 131 KVSPDTANNL---SMGLPHHQHHLNH---------------------------------- 153
           KVSPD+A N+      +P      N                                   
Sbjct: 448 KVSPDSAENMHEYPSDIPRQILEQNEDLVIIRQQLQNPPAPPGTPTANLSNSYDASISKS 507

Query: 154 --HQAYLPYNTISFPGKVMQQSSGPNTP-VSVAVS---------------NSFPNQLISL 195
             + A+ P N++S    +      PN P +  A+S               N FPNQLISL
Sbjct: 508 TTNSAFTPINSMSGHLNLNHHQLAPNRPYIYDAISFQKQNSLDLPKSQPSNGFPNQLISL 567

Query: 196 HQIRNYAHQPGSTLMPGEHILAGLTKDK 223
           HQIRNYAHQP + LM  EH + G  KDK
Sbjct: 568 HQIRNYAHQPNAGLM--EHSILGGLKDK 593

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270015655|gb|EFA12103.1| hypothetical protein TcasGA2_TC016018 [Tribolium castaneum]

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 148/268 (55%), Positives = 166/268 (61%), Gaps = 61/268 (22%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF DE +LLEHIPK
Sbjct: 137 RTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFSDEPSLLEHIPK 196

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPI---IGIPRAALENPHYWP 130
           HK+SKHLKTHICQYCGKSYTQETYLSKHMQKHAER+DKRPPI   +G+    LE+P YWP
Sbjct: 197 HKESKHLKTHICQYCGKSYTQETYLSKHMQKHAERTDKRPPIGPALGLNHRGLEHP-YWP 255

Query: 131 KVSPDTANNL---SMGLPHHQHHLNH---------------------------------- 153
           KVSPD+A N+      +P      N                                   
Sbjct: 256 KVSPDSAENMHEYPSDIPRQILEQNEDLVIIRQQLQNPPAPPGTPTANLSNSYDASISKS 315

Query: 154 --HQAYLPYNTISFPGKVMQQSSGPNTP-VSVAV---------------SNSFPNQLISL 195
             + A+ P N++S    +      PN P +  A+               SN FPNQLISL
Sbjct: 316 TTNSAFTPINSMSGHLNLNHHQLAPNRPYIYDAISFQKQNSLDLPKSQPSNGFPNQLISL 375

Query: 196 HQIRNYAHQPGSTLMPGEHILAGLTKDK 223
           HQIRNYAHQP + LM  EH + G  KDK
Sbjct: 376 HQIRNYAHQPNAGLM--EHSILGGLKDK 401

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723334|ref|XP_001942749.2| PREDICTED: hypothetical protein LOC100165100 [Acyrthosiphon pisum]

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 115/127 (90%), Positives = 119/127 (93%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKP+KCNSCYKCF DE +LLEHIPK
Sbjct: 644 RTHTGDKPYKCRHPGCTKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFQDEQSLLEHIPK 703

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAALENPHYWPKVS 133
           HK+SKHLKTHICQYCGKSYTQETYLSKHMQKHAER DKRPPIIGIPR ALEN  YW K+S
Sbjct: 704 HKESKHLKTHICQYCGKSYTQETYLSKHMQKHAERMDKRPPIIGIPRVALENGAYWGKMS 763

Query: 134 PDTANNL 140
           PDTANNL
Sbjct: 764 PDTANNL 770

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48098088|ref|XP_392003.1| PREDICTED: zinc finger protein squeeze isoform 2 [Apis mellifera]

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 116/150 (77%), Positives = 125/150 (83%), Gaps = 10/150 (6%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF DE +LLEHIPK
Sbjct: 138 RTHTGDKPYKCRHPGCTKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFSDEPSLLEHIPK 197

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGI-------PRAALENP 126
           HK+SKHLKTHICQYCGKSYTQETYL+KHMQKHAER+DKRPPIIG          AA    
Sbjct: 198 HKESKHLKTHICQYCGKSYTQETYLAKHMQKHAERTDKRPPIIGTGLRPSIHAMAAHHQD 257

Query: 127 HYWPKVSPDTA-NNLSMGLPHHQHHLNHHQ 155
           HYWPKVSPD+  ++L   LPH  HH ++HQ
Sbjct: 258 HYWPKVSPDSVISDLHDRLPH--HHTDYHQ 285

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020730|gb|EGI61135.1| Zinc finger protein rotund [Acromyrmex echinatior]

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/154 (75%), Positives = 123/154 (79%), Gaps = 10/154 (6%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF DE +LLEHIPK
Sbjct: 55  RTHTGDKPYKCRHPGCTKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFSDEPSLLEHIPK 114

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGI-------PRAALENP 126
           HK+SKHLKTHICQYCGKSYTQETYL+KHMQKHAER+DKRPPIIG           A    
Sbjct: 115 HKESKHLKTHICQYCGKSYTQETYLAKHMQKHAERTDKRPPIIGTGLRPSIHAMTAHHQD 174

Query: 127 HYWPKVSPDTA-NNLSMGLPHHQHHLNHHQAYLP 159
           HYWPKVSPDT   +L   LPH  HH  +HQ   P
Sbjct: 175 HYWPKVSPDTVIGDLHERLPH--HHTEYHQNQNP 206

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854662|ref|XP_003702839.1| PREDICTED: zinc finger protein squeeze-like isoform 2 [Megachile rotundata]

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 115/150 (76%), Positives = 124/150 (82%), Gaps = 10/150 (6%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF DE +LLEHIPK
Sbjct: 138 RTHTGDKPYKCRHPGCTKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFSDEPSLLEHIPK 197

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGI-------PRAALENP 126
           HK+SKHLKTHICQYCGKSYTQETYL+KHMQKHAER+DKRPPIIG           A    
Sbjct: 198 HKESKHLKTHICQYCGKSYTQETYLAKHMQKHAERTDKRPPIIGTGLRPSIHAMTAHHQD 257

Query: 127 HYWPKVSPDTA-NNLSMGLPHHQHHLNHHQ 155
           HYWPKVSPD+  ++L   LPH  HH ++HQ
Sbjct: 258 HYWPKVSPDSVISDLHERLPH--HHTDYHQ 285

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782755|ref|XP_003250192.1| PREDICTED: zinc finger protein squeeze isoform 1 [Apis mellifera]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 119/162 (73%), Positives = 129/162 (79%), Gaps = 12/162 (7%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF DE +LLEHIPK
Sbjct: 139 RTHTGDKPYKCRHPGCTKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFSDEPSLLEHIPK 198

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGI-------PRAALENP 126
           HK+SKHLKTHICQYCGKSYTQETYL+KHMQKHAER+DKRPPIIG          AA    
Sbjct: 199 HKESKHLKTHICQYCGKSYTQETYLAKHMQKHAERTDKRPPIIGTGLRPSIHAMAAHHQD 258

Query: 127 HYWPKVSPDTA-NNLSMGLPHHQHHLNHHQAYLPYNTISFPG 167
           HYWPKVSPD+  ++L   LPH  HH ++HQ   P   +  PG
Sbjct: 259 HYWPKVSPDSVISDLHDRLPH--HHTDYHQNQNP--EMLLPG 296

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724596|ref|XP_003400667.1| PREDICTED: hypothetical protein LOC100643342 [Bombus terrestris]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 116/150 (77%), Positives = 125/150 (83%), Gaps = 10/150 (6%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF DE +LLEHIPK
Sbjct: 321 RTHTGDKPYKCRHPGCTKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFSDEPSLLEHIPK 380

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGI-------PRAALENP 126
           HK+SKHLKTHICQYCGKSYTQETYL+KHMQKHAER+DKRPPIIG          AA    
Sbjct: 381 HKESKHLKTHICQYCGKSYTQETYLAKHMQKHAERTDKRPPIIGTGLRPSIHAMAAHHQD 440

Query: 127 HYWPKVSPDTA-NNLSMGLPHHQHHLNHHQ 155
           HYWPKVSPD+  ++L   LPH  HH ++HQ
Sbjct: 441 HYWPKVSPDSVISDLHDRLPH--HHTDYHQ 468

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307190491|gb|EFN74506.1| Zinc finger protein 362 [Camponotus floridanus]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 115/150 (76%), Positives = 122/150 (81%), Gaps = 10/150 (6%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF DE +LLEHIPK
Sbjct: 136 RTHTGDKPYKCRHPGCTKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFSDEPSLLEHIPK 195

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGI-------PRAALENP 126
           HK+SKHLKTHICQYCGKSYTQETYL+KHMQKHAER+DKRPPIIG          A     
Sbjct: 196 HKESKHLKTHICQYCGKSYTQETYLAKHMQKHAERTDKRPPIIGTGLRPSIHAMATHHQD 255

Query: 127 HYWPKVSPDTA-NNLSMGLPHHQHHLNHHQ 155
           HYWPKVSPD+   +L   LPH  HH  +HQ
Sbjct: 256 HYWPKVSPDSVIGDLHERLPH--HHAEYHQ 283

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350397896|ref|XP_003485024.1| PREDICTED: zinc finger protein squeeze-like [Bombus impatiens]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 117/154 (75%), Positives = 126/154 (81%), Gaps = 10/154 (6%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF DE +LLEHIPK
Sbjct: 207 RTHTGDKPYKCRHPGCTKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFSDEPSLLEHIPK 266

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGI-------PRAALENP 126
           HK+SKHLKTHICQYCGKSYTQETYL+KHMQKHAER+DKRPPIIG          AA    
Sbjct: 267 HKESKHLKTHICQYCGKSYTQETYLAKHMQKHAERTDKRPPIIGTGLRPSIHAMAAHHQD 326

Query: 127 HYWPKVSPDTA-NNLSMGLPHHQHHLNHHQAYLP 159
           HYWPKVSPD+  ++L   LPH  HH ++HQ   P
Sbjct: 327 HYWPKVSPDSVISDLHDRLPH--HHTDYHQNQNP 358

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
FB|FBgn0010768	535	sqz "squeeze" [Drosophila mela	0.443	0.185	0.858	9.9e-60
FB|FBgn0259172	946	rn "rotund" [Drosophila melano	0.493	0.116	0.872	6.6e-53
WB|WBGene00003015	459	lin-29 [Caenorhabditis elegans	0.430	0.209	0.812	5e-44
UNIPROTKB|F1MUJ5	416	ZNF362 "Uncharacterized protei	0.408	0.218	0.597	3.4e-29
UNIPROTKB|E2RK19	418	ZNF362 "Uncharacterized protei	0.408	0.217	0.597	3.4e-29
UNIPROTKB|J9P7D0	438	ZNF362 "Uncharacterized protei	0.408	0.207	0.597	3.4e-29
UNIPROTKB|J9P7M5	416	ZNF362 "Uncharacterized protei	0.408	0.218	0.597	3.4e-29
UNIPROTKB|Q5T0B9	420	ZNF362 "Zinc finger protein 36	0.408	0.216	0.597	3.4e-29
RGD|1306498	418	Zfp362 "zinc finger protein 36	0.408	0.217	0.597	3.4e-29
UNIPROTKB|Q5ZM27	476	ZNF384 "Uncharacterized protei	0.524	0.245	0.466	5e-29

FB|FBgn0010768 sqz "squeeze" [Drosophila melanogaster (taxid:7227)]

 Score = 499 (180.7 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
 Identities = 85/99 (85%), Positives = 91/99 (91%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             RTHTGDKPYKCRH GC KAFSQLSNLQSHSRCHQTDKP+KCNSCYKCF DE  LLEHIPK
Sbjct:   206 RTHTGDKPYKCRHAGCPKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEMTLLEHIPK 265

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKR 112
             HKDSKHLKTHIC  CGKSYTQETYL KH+QKHAE+++K+
Sbjct:   266 HKDSKHLKTHICNLCGKSYTQETYLQKHLQKHAEKAEKQ 304

GO:0048477 "oogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0007517 "muscle organ development" evidence=IMP

GO:0048666 "neuron development" evidence=IMP

GO:0070983 "dendrite guidance" evidence=IMP

GO:0014019 "neuroblast development" evidence=IMP

FB|FBgn0259172 rn "rotund" [Drosophila melanogaster (taxid:7227)]

 Score = 555 (200.4 bits), Expect = 6.6e-53, P = 6.6e-53
 Identities = 96/110 (87%), Positives = 103/110 (93%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             RTHTGDKPYKCRHPGC KAFSQLSNLQSHSRCHQTDKP+KCNSCYKCF DE +LLEHIPK
Sbjct:   565 RTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEPSLLEHIPK 624

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAAL 123
             HK+SKHLKTHICQYCGKSYTQETYL+KHMQKHAER+DKRPPI+    AA+
Sbjct:   625 HKESKHLKTHICQYCGKSYTQETYLTKHMQKHAERTDKRPPIVPGSAAAI 674

GO:0048749 "compound eye development" evidence=IMP

GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0005634 "nucleus" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

WB|WBGene00003015 lin-29 [Caenorhabditis elegans (taxid:6239)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 78/96 (81%), Positives = 87/96 (90%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             RTHTG+KPYKC+  GC KAFSQLSNLQSHSRCHQTDKP+KCNSCYKCF DE +LL+HIPK
Sbjct:   200 RTHTGEKPYKCKFTGCDKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFTDEQSLLDHIPK 259

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERS 109
             HK+SKHLK HIC +CGKSYTQ+TYL KHM KHA+RS
Sbjct:   260 HKESKHLKIHICPFCGKSYTQQTYLQKHMTKHADRS 295

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040034 "regulation of development, heterochronic" evidence=IMP

GO:0043067 "regulation of programmed cell death" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA

UNIPROTKB|F1MUJ5 ZNF362 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 55/92 (59%), Positives = 65/92 (70%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKPYKC +CY+ + D  +L  H+  
Sbjct:   299 RIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSA 358

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
             H   KH K + C  CG++YT ETYL KHM KH
Sbjct:   359 HA-IKHAKAYCCSMCGRAYTSETYLMKHMSKH 389

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E2RK19 ZNF362 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 55/92 (59%), Positives = 65/92 (70%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKPYKC +CY+ + D  +L  H+  
Sbjct:   301 RIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSA 360

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
             H   KH K + C  CG++YT ETYL KHM KH
Sbjct:   361 HA-IKHAKAYCCSMCGRAYTSETYLMKHMSKH 391

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9P7D0 ZNF362 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 55/92 (59%), Positives = 65/92 (70%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKPYKC +CY+ + D  +L  H+  
Sbjct:   321 RIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSA 380

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
             H   KH K + C  CG++YT ETYL KHM KH
Sbjct:   381 HA-IKHAKAYCCSMCGRAYTSETYLMKHMSKH 411

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9P7M5 ZNF362 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 55/92 (59%), Positives = 65/92 (70%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKPYKC +CY+ + D  +L  H+  
Sbjct:   299 RIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSA 358

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
             H   KH K + C  CG++YT ETYL KHM KH
Sbjct:   359 HA-IKHAKAYCCSMCGRAYTSETYLMKHMSKH 389

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q5T0B9 ZNF362 "Zinc finger protein 362" [Homo sapiens (taxid:9606)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 55/92 (59%), Positives = 65/92 (70%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKPYKC +CY+ + D  +L  H+  
Sbjct:   303 RIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSA 362

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
             H   KH K + C  CG++YT ETYL KHM KH
Sbjct:   363 HA-IKHAKAYCCSMCGRAYTSETYLMKHMSKH 393

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

RGD|1306498 Zfp362 "zinc finger protein 362" [Rattus norvegicus (taxid:10116)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 55/92 (59%), Positives = 65/92 (70%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKPYKC +CY+ + D  +L  H+  
Sbjct:   301 RIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSA 360

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
             H   KH K + C  CG++YT ETYL KHM KH
Sbjct:   361 HA-IKHAKAYCCSMCGRAYTSETYLMKHMSKH 391

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5ZM27 ZNF384 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 323 (118.8 bits), Expect = 5.0e-29, P = 5.0e-29
 Identities = 55/118 (46%), Positives = 77/118 (65%)

Query:    14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
             R HTGD+PYKC HPGC KAF+QLSNLQSH R H  DKP+KC++C++ + D  +L  H+  
Sbjct:   306 RIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAASLEVHLAT 365

Query:    74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAALENPHYWPK 131
             H   KH K + C  C ++YT ETYL KHM+KH     ++  +    +A+ +  H+ P+
Sbjct:   366 HT-VKHAKVYTCSICSRAYTSETYLMKHMRKHNIPDPQQQVVQAQAQASQQQQHFQPQ 422

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5T0B9	ZN362_HUMAN	No assigned EC number	0.5978	0.4080	0.2166	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
KOG2462|consensus	279		99.89
KOG2462|consensus	279		99.88
KOG3576|consensus	267		99.72
KOG3576|consensus	267		99.67
KOG1074|consensus	958		99.64
KOG1074|consensus	958		99.64
KOG3623|consensus	1007		99.52
KOG3608|consensus	467		99.51
KOG3623|consensus	1007		99.48
KOG3608|consensus	467		99.46
PHA00733	128	hypothetical protein	99.25
PHA02768	55	hypothetical protein; Provisional	98.98
PLN03086	567	PRLI-interacting factor K; Provisional	98.98
PHA02768	55	hypothetical protein; Provisional	98.97
PHA00733	128	hypothetical protein	98.96
PLN03086	567	PRLI-interacting factor K; Provisional	98.87
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.76
KOG3993|consensus	500		98.71
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.7
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.51
PHA00732	79	hypothetical protein	98.4
PHA00616	44	hypothetical protein	98.38
PHA00732	79	hypothetical protein	98.28
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.25
PHA00616	44	hypothetical protein	98.24
KOG3993|consensus	500		98.05
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.02
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.99
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.97
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.89
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.74
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.56
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.5
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.49
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.35
smart00355	26	ZnF_C2H2 zinc finger.	97.08
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.72
smart00355	26	ZnF_C2H2 zinc finger.	96.72
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.64
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.54
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.51
PRK04860	160	hypothetical protein; Provisional	96.49
PRK04860	160	hypothetical protein; Provisional	96.27
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.97
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.92
KOG1146|consensus	1406		95.92
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.91
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.89
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.44
KOG1146|consensus	1406		95.14
KOG2893|consensus	341		95.03
COG5048	467	FOG: Zn-finger [General function prediction only]	94.66
KOG2231|consensus	669		94.3
KOG4173|consensus	253		94.26
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.1
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.83
KOG2231|consensus	669		93.8
COG5048	467	FOG: Zn-finger [General function prediction only]	93.69
KOG2482|consensus	423		93.14
COG5236	493	Uncharacterized conserved protein, contains RING Z	92.11
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.1
KOG2186|consensus	276		91.75
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	91.72
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.63
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	91.37
KOG4124|consensus	442		90.1
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.08
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	87.75
KOG2893|consensus	341		87.25
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	85.77
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	85.52
COG4049	65	Uncharacterized protein containing archaeal-type C	84.56
COG4049	65	Uncharacterized protein containing archaeal-type C	83.67
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	83.13
COG1592	166	Rubrerythrin [Energy production and conversion]	82.96
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	82.34
KOG4124|consensus	442		82.2
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	82.17
PHA00626	59	hypothetical protein	82.14
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	82.0
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	81.32
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	81.05
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	80.83
COG5236	493	Uncharacterized conserved protein, contains RING Z	80.79
KOG2482|consensus	423		80.49
PRK06266	178	transcription initiation factor E subunit alpha; V	80.02

>KOG2462|consensus

Probab=99.89  E-value=2.2e-24  Score=167.45  Aligned_cols=116  Identities=28%  Similarity=0.515  Sum_probs=106.2

Q ss_pred             CCccHHHHHHHHHhCCC---CCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCC
Q psy8183           2 DLAGQELTMEIRRTHTG---DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK   78 (223)
Q Consensus         2 ~f~~~~~~~~h~~~H~~---~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   78 (223)
                      .+++-..|-+|+++|-.   .+.+.|++  |+|.|.+...|+.|+++|.  -+++|.+||+.|.+.+.|+-|+|+|+|| 
T Consensus       139 ~ysT~snLsrHkQ~H~~~~s~ka~~C~~--C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGE-  213 (279)
T KOG2462|consen  139 SYSTSSNLSRHKQTHRSLDSKKAFSCKY--CGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGE-  213 (279)
T ss_pred             ccccccccchhhcccccccccccccCCC--CCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCC-
Confidence            45666778899999943   67899988  9999999999999999997  5799999999999999999999999999 


Q ss_pred             CCCcccCCccCCccCChHHHHHHHhhhcccCCCCCCcCCCCCcccC
Q psy8183          79 HLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAALE  124 (223)
Q Consensus        79 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~c~~~~~~~~  124 (223)
                        |||.|..|+|.|..+++|+-|+++|.+.+.|.|..|+..|+..+
T Consensus       214 --KPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~S  257 (279)
T KOG2462|consen  214 --KPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKS  257 (279)
T ss_pred             --CCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHH
Confidence              99999999999999999999999999999999999999877543

>KOG2462|consensus

Probab=99.88  E-value=1.6e-23  Score=162.60  Aligned_cols=97  Identities=39%  Similarity=0.667  Sum_probs=91.2

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHL   80 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   80 (223)
                      |.|..--.|+.|+|||+  -+++|.+  |||.|.+...|+.|+|+|+|||||.|..|++.|..+++|+.||++|.+.   
T Consensus       169 K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~---  241 (279)
T KOG2462|consen  169 KVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDV---  241 (279)
T ss_pred             ceeeehHHHhhHhhccC--CCccccc--ccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCC---
Confidence            34666778999999998  6799988  9999999999999999999999999999999999999999999999998   


Q ss_pred             CcccCCccCCccCChHHHHHHHhh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      |.|+|..|+|.|.+.+.|.+|...
T Consensus       242 K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  242 KKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccccCcchhhHHHHHHHHHHhhhh
Confidence            899999999999999999999865

>KOG3576|consensus

Probab=99.72  E-value=2e-18  Score=128.34  Aligned_cols=80  Identities=33%  Similarity=0.605  Sum_probs=43.4

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHH
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLS   99 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~   99 (223)
                      ..|.|..  |+|+|....-|.+|++.|...|.|.|..||+.|...-.|++|+++|+|.   +||+|..|++.|.++-+|.
T Consensus       116 d~ftCrv--CgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgv---rpykc~~c~kaftqrcsle  190 (267)
T KOG3576|consen  116 DSFTCRV--CGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGV---RPYKCSLCEKAFTQRCSLE  190 (267)
T ss_pred             Ceeeeeh--hhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCc---cccchhhhhHHHHhhccHH
Confidence            3455555  5555555555555555555555555555555555555555555555554   5555555555555555555


Q ss_pred             HHHhh
Q psy8183         100 KHMQK  104 (223)
Q Consensus       100 ~H~~~  104 (223)
                      .|++.
T Consensus       191 shl~k  195 (267)
T KOG3576|consen  191 SHLKK  195 (267)
T ss_pred             HHHHH
Confidence            55443

>KOG3576|consensus

Probab=99.67  E-value=1.2e-17  Score=124.22  Aligned_cols=107  Identities=26%  Similarity=0.469  Sum_probs=97.3

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCC--
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK--   78 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~--   78 (223)
                      |.|.-+.+|.+|++-|...|.|.|..  |||.|.+...|++|+++|+|.+||+|..|++.|..+..|..|.+.-++..  
T Consensus       125 K~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~  202 (267)
T KOG3576|consen  125 KKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQ  202 (267)
T ss_pred             hhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHH
Confidence            46889999999999999999999988  99999999999999999999999999999999999999999998766532  


Q ss_pred             ------CCCcccCCccCCccCChHHHHHHHhhhcccC
Q psy8183          79 ------HLKTHICQYCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        79 ------~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                            ..|.|+|+.||..-.....+..|++.|+...
T Consensus       203 yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  203 YAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence                  2378999999999999999999999987543

>KOG1074|consensus

Probab=99.64  E-value=6.1e-17  Score=141.82  Aligned_cols=68  Identities=25%  Similarity=0.501  Sum_probs=58.3

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccC----CCCCC---cCCCCCc
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERS----DKRPP---IIGIPRA  121 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~----~~~~~---~c~~~~~  121 (223)
                      +-.|-+|.+.......|+.|+++|+|+   |||+|.|||+.|.++.+|+.|+-+|....    .+.|+   +|-..+.
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGE---RPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGE---RPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFT  679 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCc---CccccccccchhccccchhhcccccccCccccccccCCchhhhccccc
Confidence            468999999999999999999999999   99999999999999999999999887553    45666   5554443

>KOG1074|consensus

Probab=99.64  E-value=1e-16  Score=140.44  Aligned_cols=71  Identities=34%  Similarity=0.653  Sum_probs=62.8

Q ss_pred             CccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCC----CCccCC---cCcccccCchhHHhhhhhhc
Q psy8183           3 LAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD----KPYKCN---SCYKCFVDETALLEHIPKHK   75 (223)
Q Consensus         3 f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~----k~~~C~---~C~~~f~~~~~l~~H~~~h~   75 (223)
                      .+-+..|+.|.|+|+|||||+|++  ||++|.++.+|+.||.+|...    -.+.|+   +|-+.|.+.-.|.+|++.|.
T Consensus       615 lSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~  692 (958)
T KOG1074|consen  615 LSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRIHL  692 (958)
T ss_pred             ccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCchhhhcccccccccccceEEeec
Confidence            456789999999999999999999  999999999999999998643    347788   89999999888888888876

>KOG3623|consensus

Probab=99.52  E-value=3.2e-15  Score=129.37  Aligned_cols=83  Identities=35%  Similarity=0.639  Sum_probs=78.8

Q ss_pred             CCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChH
Q psy8183          17 TGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQET   96 (223)
Q Consensus        17 ~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~   96 (223)
                      +.+-.|.|+.  |+|+|-..+.|.+|.--|+|.+||.|.+|.+.|+.+-.|..|+|.|.|+   |||+|+.|+|+|+...
T Consensus       890 te~gmyaCDq--CDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGE---KPfQCdKClKRFSHSG  964 (1007)
T KOG3623|consen  890 TEDGMYACDQ--CDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGE---KPFQCDKCLKRFSHSG  964 (1007)
T ss_pred             CccccchHHH--HHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCC---Ccchhhhhhhhccccc
Confidence            4466899999  9999999999999999999999999999999999999999999999999   9999999999999999


Q ss_pred             HHHHHHhh
Q psy8183          97 YLSKHMQK  104 (223)
Q Consensus        97 ~l~~H~~~  104 (223)
                      ++..||..
T Consensus       965 SYSQHMNH  972 (1007)
T KOG3623|consen  965 SYSQHMNH  972 (1007)
T ss_pred             chHhhhcc
Confidence            99999853

>KOG3608|consensus

Probab=99.51  E-value=1.4e-14  Score=116.17  Aligned_cols=115  Identities=24%  Similarity=0.395  Sum_probs=83.1

Q ss_pred             CCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhC--CCCC--------------------------cc
Q psy8183           2 DLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQ--TDKP--------------------------YK   53 (223)
Q Consensus         2 ~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~--~~k~--------------------------~~   53 (223)
                      .|.++..|++|.++|++||..-|+.  ||..|.++..|-.|++..+  ...+                          |+
T Consensus       188 ~~~~k~~LreH~r~Hs~eKvvACp~--Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~yk  265 (467)
T KOG3608|consen  188 HMGNKYRLREHIRTHSNEKVVACPH--CGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYK  265 (467)
T ss_pred             hhccHHHHHHHHHhcCCCeEEecch--HHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhccc
Confidence            4778999999999999999999966  9988888888888876433  2223                          56


Q ss_pred             CCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccCCCCCCc--CCCCCc
Q psy8183          54 CNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPI--IGIPRA  121 (223)
Q Consensus        54 C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~--c~~~~~  121 (223)
                      |+.|+......+.|.+|++.-+.+.  |||+|+.|++.|.+.+.|.+|..+|. +..|.|..  |.+.++
T Consensus       266 CplCdmtc~~~ssL~~H~r~rHs~d--kpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r  332 (467)
T KOG3608|consen  266 CPLCDMTCSSASSLTTHIRYRHSKD--KPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVR  332 (467)
T ss_pred             ccccccCCCChHHHHHHHHhhhccC--CCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHH
Confidence            6666666666666666665444332  77888888888888888888887776 56677766  555443

>KOG3623|consensus

Probab=99.48  E-value=5e-14  Score=122.13  Aligned_cols=98  Identities=23%  Similarity=0.496  Sum_probs=57.9

Q ss_pred             eecccCccccccCChHHHHHHHHH-hC-CCCCccCCcCcccccCchhHHhhhhhhcCCCC----------CCcccCCccC
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRC-HQ-TDKPYKCNSCYKCFVDETALLEHIPKHKDSKH----------LKTHICQYCG   89 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~-h~-~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------~k~~~C~~C~   89 (223)
                      ..|++  |.+.+.+...|+.|++. |. .+..|.|..|.++|..+..|.+||.+|....+          .+.|+|..||
T Consensus       211 ltcpy--cdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECg  288 (1007)
T KOG3623|consen  211 LTCPY--CDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECG  288 (1007)
T ss_pred             hcchh--HHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccc
Confidence            35655  66666666666666653 21 23346666666666666666666666542211          2556666666


Q ss_pred             CccCChHHHHHHHhhhcccCCCCCCcCCCCCc
Q psy8183          90 KSYTQETYLSKHMQKHAERSDKRPPIIGIPRA  121 (223)
Q Consensus        90 ~~f~~~~~l~~H~~~h~~~~~~~~~~c~~~~~  121 (223)
                      |.|..+-.|+.|+|+|.|+++|.|+.|...+.
T Consensus       289 KAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFS  320 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHLRIHSGEKPFECPNCKKRFS  320 (1007)
T ss_pred             hhhhhHHHHHhhheeecCCCCcCCcccccccc
Confidence            66666666666666666666666666665544

>KOG3608|consensus

Probab=99.46  E-value=7.4e-14  Score=112.12  Aligned_cols=114  Identities=26%  Similarity=0.373  Sum_probs=97.5

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHH-hCCCCCccCCcCcccccCchhHHhhhhhhcCCCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRC-HQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKH   79 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~-h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   79 (223)
                      |+|+++.+|+.|++.|-.  -|+|+.  |..+....+.|..||+. |...|||+|+.|++.|.+...|.+|...|..   
T Consensus       245 KrFaTeklL~~Hv~rHvn--~ykCpl--Cdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~---  317 (467)
T KOG3608|consen  245 KRFATEKLLKSHVVRHVN--CYKCPL--CDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSK---  317 (467)
T ss_pred             HHHhHHHHHHHHHHHhhh--cccccc--cccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccc---
Confidence            589999999999999864  589966  99999999999999995 8889999999999999999999999998873   


Q ss_pred             CCcccCCc--cCCccCChHHHHHHHhhhccc---CCCCCCcCCCCCcc
Q psy8183          80 LKTHICQY--CGKSYTQETYLSKHMQKHAER---SDKRPPIIGIPRAA  122 (223)
Q Consensus        80 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~---~~~~~~~c~~~~~~  122 (223)
                       -.|.|+.  |..+|.+...|++|++.+++.   ..|.|-.|+..+.+
T Consensus       318 -~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~  364 (467)
T KOG3608|consen  318 -TVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTS  364 (467)
T ss_pred             -cceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhcc
Confidence             6789987  999999999999998877632   45778888776553

>PHA00733 hypothetical protein

Probab=99.25  E-value=9.4e-12  Score=89.01  Aligned_cols=84  Identities=19%  Similarity=0.326  Sum_probs=71.1

Q ss_pred             CCCCCeecccCccccccCChHHHHHH--HH---HhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCc
Q psy8183          17 TGDKPYKCRHPGCVKAFSQLSNLQSH--SR---CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKS   91 (223)
Q Consensus        17 ~~~k~~~C~~p~C~k~f~~~~~L~~H--~~---~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~   91 (223)
                      ...+++.|..  |.+.|.....|..+  ++   .+.++++|.|+.|++.|.+...|..|++.+  .   .+|.|.+|++.
T Consensus        36 ~~~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~---~~~~C~~CgK~  108 (128)
T PHA00733         36 PEQKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--E---HSKVCPVCGKE  108 (128)
T ss_pred             hhhhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--C---cCccCCCCCCc
Confidence            3468899998  99999887777766  22   234578999999999999999999999976  2   67999999999


Q ss_pred             cCChHHHHHHHhhhcc
Q psy8183          92 YTQETYLSKHMQKHAE  107 (223)
Q Consensus        92 f~~~~~l~~H~~~h~~  107 (223)
                      |.....|..|+...++
T Consensus       109 F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        109 FRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCHHHHHHHHHHhcC
Confidence            9999999999988664

>PHA02768 hypothetical protein; Provisional

Probab=98.98  E-value=1.9e-10  Score=68.56  Aligned_cols=42  Identities=19%  Similarity=0.443  Sum_probs=28.4

Q ss_pred             eecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhH
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETAL   67 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l   67 (223)
                      |.|+.  ||+.|.+..+|..|+++|+  ++|+|..|++.|.+.+.|
T Consensus         6 y~C~~--CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPI--CGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcch--hCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            66765  7777777777777777766  566777777766665554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.98  E-value=8.3e-10  Score=96.10  Aligned_cols=92  Identities=16%  Similarity=0.394  Sum_probs=76.5

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccC-----
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYT-----   93 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~-----   93 (223)
                      ++.+.|++  |++.|. ...|..|+++|+  +++.|+ |++.+ .+..|..|+..|...   +++.|..|++.|.     
T Consensus       451 ~~H~~C~~--Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~---Kpi~C~fC~~~v~~g~~~  520 (567)
T PLN03086        451 KNHVHCEK--CGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPL---RLITCRFCGDMVQAGGSA  520 (567)
T ss_pred             ccCccCCC--CCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCC---CceeCCCCCCccccCccc
Confidence            45678988  999996 678999999975  789999 99755 668999999988887   9999999999985     


Q ss_pred             -----ChHHHHHHHhhhcccCCCCCCcCCCCCc
Q psy8183          94 -----QETYLSKHMQKHAERSDKRPPIIGIPRA  121 (223)
Q Consensus        94 -----~~~~l~~H~~~h~~~~~~~~~~c~~~~~  121 (223)
                           ....|..|...+ +.+.+.|..|+....
T Consensus       521 ~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vr  552 (567)
T PLN03086        521 MDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVM  552 (567)
T ss_pred             cchhhhhhhHHHHHHhc-CCcceEccccCCeee
Confidence                 245899999886 778899999987544

>PHA02768 hypothetical protein; Provisional

Probab=98.97  E-value=3.2e-10  Score=67.58  Aligned_cols=44  Identities=16%  Similarity=0.420  Sum_probs=39.9

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHH
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLS   99 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~   99 (223)
                      -|.|+.||+.|.+.+.|..|+++|+     ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~-----k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN-----TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC-----CcccCCcccceecccceeE
Confidence            4899999999999999999999998     5789999999999887664

>PHA00733 hypothetical protein

Probab=98.96  E-value=1.1e-09  Score=78.35  Aligned_cols=63  Identities=25%  Similarity=0.521  Sum_probs=53.7

Q ss_pred             HHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcC
Q psy8183           9 TMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus         9 ~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      |..|+.+ .++++|.|+.  |++.|.+...|..|++.|  +.+|.|..|++.|.....|..|+...++
T Consensus        62 l~~~~~~-~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         62 LYKLLTS-KAVSPYVCPL--CLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             HHhhccc-CCCCCccCCC--CCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            3444444 4589999988  999999999999999976  3579999999999999999999988776

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.87  E-value=5.6e-09  Score=90.98  Aligned_cols=93  Identities=18%  Similarity=0.313  Sum_probs=76.1

Q ss_pred             CCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccC----------chhHHhhh
Q psy8183           2 DLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVD----------ETALLEHI   71 (223)
Q Consensus         2 ~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~----------~~~l~~H~   71 (223)
                      .|. ...|..|+++|.  +++.|  + |++.+ .+..|..|+.+|...+++.|..|++.|..          ...|..|+
T Consensus       462 ~f~-~s~LekH~~~~H--kpv~C--p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE  534 (567)
T PLN03086        462 AFQ-QGEMEKHMKVFH--EPLQC--P-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHE  534 (567)
T ss_pred             ccc-hHHHHHHHHhcC--CCccC--C-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHH
Confidence            354 566899999985  88999  5 99766 66899999999999999999999999852          34789999


Q ss_pred             hhhcCCCCCCcccCCccCCccCChHHHHHHHhhhc
Q psy8183          72 PKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        72 ~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      ..+ +.   +++.|..||+.|..+ .|..|+...+
T Consensus       535 ~~C-G~---rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        535 SIC-GS---RTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             Hhc-CC---cceEccccCCeeeeh-hHHHHHHHhh
Confidence            886 55   899999999988766 6778876544

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.76  E-value=5.7e-09  Score=53.22  Aligned_cols=24  Identities=58%  Similarity=0.977  Sum_probs=13.6

Q ss_pred             HHHHHHhCCCCCCeecccCccccccC
Q psy8183           9 TMEIRRTHTGDKPYKCRHPGCVKAFS   34 (223)
Q Consensus         9 ~~~h~~~H~~~k~~~C~~p~C~k~f~   34 (223)
                      |..|+++|+|+++|.|+.  |++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~--C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPY--CGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESS--SSEEES
T ss_pred             HHHHhhhcCCCCCCCCCC--CcCeeC
Confidence            455555566666666654  655554

...

>KOG3993|consensus

Probab=98.71  E-value=4.5e-09  Score=86.72  Aligned_cols=86  Identities=27%  Similarity=0.523  Sum_probs=72.0

Q ss_pred             eecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCC--------C--------------
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK--------H--------------   79 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~--------~--------------   79 (223)
                      |.|..  |...|.+...|.+|.-.-.-.-.|+|+.|+|.|....+|-.|.|+|....        +              
T Consensus       268 yiCqL--CK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  268 YICQL--CKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHH--HHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            99998  99999999999999753333345999999999999999999999985322        1              


Q ss_pred             --------CCcccCCccCCccCChHHHHHHHhhhcccC
Q psy8183          80 --------LKTHICQYCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        80 --------~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                              ..-|.|.+|+|.|.+...|++|+.+|+...
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence                    124899999999999999999999987644

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.70  E-value=1e-08  Score=52.23  Aligned_cols=26  Identities=50%  Similarity=0.961  Sum_probs=24.1

Q ss_pred             HHHHHHHHhCCCCCccCCcCcccccC
Q psy8183          38 NLQSHSRCHQTDKPYKCNSCYKCFVD   63 (223)
Q Consensus        38 ~L~~H~~~h~~~k~~~C~~C~~~f~~   63 (223)
                      +|.+|+++|+++++|.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58999999999999999999999963

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.51  E-value=3.2e-08  Score=79.02  Aligned_cols=74  Identities=28%  Similarity=0.412  Sum_probs=50.6

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHH-hCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChH
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRC-HQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQET   96 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~-h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~   96 (223)
                      ++|||+|+.+||.|+|+....|+.|+.- |...+...-+.          -..+.-.-...   |||+|++|+|+|+...
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~----------p~~~~~F~~~~---KPYrCevC~KRYKNlN  412 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPS----------PEKMNIFSAKD---KPYRCEVCDKRYKNLN  412 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCC----------ccccccccccC---CceeccccchhhccCc
Confidence            4699999999999999999999999874 43222211110          00111112223   8999999999999999


Q ss_pred             HHHHHHhh
Q psy8183          97 YLSKHMQK  104 (223)
Q Consensus        97 ~l~~H~~~  104 (223)
                      .|+-|+..
T Consensus       413 GLKYHr~H  420 (423)
T COG5189         413 GLKYHRKH  420 (423)
T ss_pred             cceecccc
Confidence            98888653

>PHA00732 hypothetical protein

Probab=98.40  E-value=2.1e-07  Score=60.66  Aligned_cols=48  Identities=31%  Similarity=0.513  Sum_probs=38.9

Q ss_pred             CeecccCccccccCChHHHHHHHHH-hCCCCCccCCcCcccccCchhHHhhhhhhcC
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRC-HQTDKPYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~-h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      ||.|+.  |++.|.+...|..|++. |.   ++.|+.|++.|.   .+..|++...+
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            588977  99999999999999985 54   358999999997   47788866554

>PHA00616 hypothetical protein

Probab=98.38  E-value=1.7e-07  Score=53.25  Aligned_cols=35  Identities=14%  Similarity=0.281  Sum_probs=28.8

Q ss_pred             CeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      +|.|..  ||+.|..+..|.+|++.|++++++.|+.-
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCCCccceeEE
Confidence            578866  88888888888888888888888888753

>PHA00732 hypothetical protein

Probab=98.28  E-value=6.5e-07  Score=58.34  Aligned_cols=48  Identities=29%  Similarity=0.490  Sum_probs=39.5

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhc
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      +|.|+.|++.|.+...|..|++.++.     ++.|..|++.|.   .+..|+++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~-----~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT-----LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC-----CCccCCCCCEeC---ChhhhhcccC
Confidence            58899999999999999999985432     357999999998   5788886543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.25  E-value=1.6e-06  Score=52.39  Aligned_cols=48  Identities=25%  Similarity=0.452  Sum_probs=22.8

Q ss_pred             eecccCccccccCChHHHHHHHHH-hCC-CCCccCCcCcccccCchhHHhhhhhh
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRC-HQT-DKPYKCNSCYKCFVDETALLEHIPKH   74 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~-h~~-~k~~~C~~C~~~f~~~~~l~~H~~~h   74 (223)
                      |.|++  |++ ..+...|..|... |.. .+.+.|++|...+.  .+|.+|+..+
T Consensus         3 f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            55544  555 3334555555543 322 23455555554432  2555555444

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=98.24  E-value=4.1e-07  Score=51.67  Aligned_cols=33  Identities=18%  Similarity=0.405  Sum_probs=19.6

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      +|.|..||+.|.....|.+|++.|+++   +++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~---~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQ---NKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCC---Ccccee
Confidence            355666666666666666666666665   555554

>KOG3993|consensus

Probab=98.05  E-value=1.6e-06  Score=71.93  Aligned_cols=72  Identities=28%  Similarity=0.449  Sum_probs=55.0

Q ss_pred             CccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCC---------------------------------C
Q psy8183           3 LAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQT---------------------------------D   49 (223)
Q Consensus         3 f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~---------------------------------~   49 (223)
                      |..-..|.+|+-.-.-..-|+|++  |+|.|....+|..|.|-|.-                                 +
T Consensus       277 YeD~F~LAQHrC~RIV~vEYrCPE--C~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~  354 (500)
T KOG3993|consen  277 YEDAFALAQHRCPRIVHVEYRCPE--CDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSS  354 (500)
T ss_pred             hhhHHHHhhccCCeeEEeeecCCc--ccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccC
Confidence            334455666665443334599976  99999999999999887731                                 1


Q ss_pred             CCccCCcCcccccCchhHHhhhhhhcC
Q psy8183          50 KPYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus        50 k~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      .-|.|..|++.|.+...|+.|+.+|+.
T Consensus       355 gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  355 GIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             ceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence            238999999999999999999888764

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.02  E-value=9.5e-06  Score=49.02  Aligned_cols=52  Identities=27%  Similarity=0.558  Sum_probs=41.0

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhc
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      .|.|++|++ ..+...|..|....+.... +.+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~-~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES-KNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC-CCccCCCchhhhh--hHHHHHHHHhc
Confidence            489999999 5567889999876654432 6799999998655  48999998765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.99  E-value=3.3e-06  Score=41.54  Aligned_cols=23  Identities=39%  Similarity=0.944  Sum_probs=15.2

Q ss_pred             ccCCccCCccCChHHHHHHHhhh
Q psy8183          83 HICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      |.|.+|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666777777777777766653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.97  E-value=1.9e-06  Score=69.06  Aligned_cols=25  Identities=16%  Similarity=0.109  Sum_probs=17.5

Q ss_pred             cccCCCCCCcCCCCCcccCCCCCCC
Q psy8183         106 AERSDKRPPIIGIPRAALENPHYWP  130 (223)
Q Consensus       106 ~~~~~~~~~~c~~~~~~~~~~~~~~  130 (223)
                      ...++|+|.+|+..-.......|+.
T Consensus       394 ~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         394 AKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             ccCCceeccccchhhccCccceecc
Confidence            3558899999998766555555543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.89  E-value=1.1e-05  Score=39.60  Aligned_cols=23  Identities=57%  Similarity=0.921  Sum_probs=17.5

Q ss_pred             eecccCccccccCChHHHHHHHHHh
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      |.|+.  |++.|.+...|..|++.|
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhHC
Confidence            67766  888888888888887764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.74  E-value=2.3e-05  Score=38.63  Aligned_cols=23  Identities=39%  Similarity=0.875  Sum_probs=13.8

Q ss_pred             ccCCccCCccCChHHHHHHHhhh
Q psy8183          83 HICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      |.|.+|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666654

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.56  E-value=5.3e-05  Score=51.52  Aligned_cols=74  Identities=26%  Similarity=0.498  Sum_probs=22.3

Q ss_pred             ecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHH
Q psy8183          23 KCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHM  102 (223)
Q Consensus        23 ~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~  102 (223)
                      +|..  |+..|.+...|..|+...++...   . ....+.....+..+++....    ..+.|.+|++.|.....|..|+
T Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~~H~~~~---~-~~~~l~~~~~~~~~~~~~~~----~~~~C~~C~~~f~s~~~l~~Hm   70 (100)
T PF12756_consen    1 QCLF--CDESFSSVDDLLQHMKKKHGFDI---P-DQKYLVDPNRLLNYLRKKVK----ESFRCPYCNKTFRSREALQEHM   70 (100)
T ss_dssp             ----------------------------------------------------------SSEEBSSSS-EESSHHHHHHHH
T ss_pred             Cccc--ccccccccccccccccccccccc---c-cccccccccccccccccccC----CCCCCCccCCCCcCHHHHHHHH
Confidence            4877  99999999999999986443221   1 11122233444444443322    4699999999999999999999


Q ss_pred             hhhc
Q psy8183         103 QKHA  106 (223)
Q Consensus       103 ~~h~  106 (223)
                      +.+.
T Consensus        71 ~~~~   74 (100)
T PF12756_consen   71 RSKH   74 (100)
T ss_dssp             HHTT
T ss_pred             cCcc
Confidence            9753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.50  E-value=0.00011  Score=36.09  Aligned_cols=23  Identities=39%  Similarity=0.811  Sum_probs=14.6

Q ss_pred             eecccCccccccCChHHHHHHHHHh
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      |.|+.  |++.|.+...|..|+++|
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            56766  777777777777777665

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.49  E-value=4.6e-05  Score=38.93  Aligned_cols=25  Identities=28%  Similarity=0.677  Sum_probs=16.2

Q ss_pred             cccCCccCCccCChHHHHHHHhhhc
Q psy8183          82 THICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      +|.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            3566666666666666666666553

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.35  E-value=0.00014  Score=37.07  Aligned_cols=25  Identities=48%  Similarity=0.973  Sum_probs=17.3

Q ss_pred             CeecccCccccccCChHHHHHHHHHhC
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRCHQ   47 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~h~   47 (223)
                      +|.|..  |++.|.+...|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            467766  7777777777777776653

>smart00355 ZnF_C2H2 zinc finger

Probab=97.08  E-value=0.00056  Score=33.97  Aligned_cols=23  Identities=35%  Similarity=0.774  Sum_probs=15.6

Q ss_pred             ccCCccCCccCChHHHHHHHhhh
Q psy8183          83 HICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45677777777777777776654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.72  E-value=0.00088  Score=39.02  Aligned_cols=29  Identities=24%  Similarity=0.456  Sum_probs=11.5

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      +.|-.|++  |+..+.+..+|++|+..+++.
T Consensus        22 ~~PatCP~--C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   22 EQPATCPI--CGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             S--EE-TT--T--EESSHHHHHHHHHHHTTT
T ss_pred             CCCCCCCc--chhhccchhhHHHHHHHHhcc
Confidence            44445533  555555555555555444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.72  E-value=0.0016  Score=32.24  Aligned_cols=23  Identities=43%  Similarity=0.878  Sum_probs=15.1

Q ss_pred             eecccCccccccCChHHHHHHHHHh
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      |.|..  |++.|.....|..|++.|
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHh
Confidence            45655  777777777777776654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.64  E-value=0.0017  Score=37.90  Aligned_cols=27  Identities=22%  Similarity=0.479  Sum_probs=12.6

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      .|-.|++|+..+.+..+|++|+.+.++
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhc
Confidence            455566666666666666666555443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.54  E-value=0.0012  Score=32.79  Aligned_cols=22  Identities=32%  Similarity=0.801  Sum_probs=15.1

Q ss_pred             ccCCccCCccCChHHHHHHHhh
Q psy8183          83 HICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      |.|.+|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4577777777777777777654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.51  E-value=0.0022  Score=31.54  Aligned_cols=23  Identities=26%  Similarity=0.619  Sum_probs=12.5

Q ss_pred             ccCCccCCccCChHHHHHHHhhhc
Q psy8183          83 HICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      |+|..|+.... ...|.+|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666655 666666666543

>PRK04860 hypothetical protein; Provisional

Probab=96.49  E-value=0.0012  Score=49.03  Aligned_cols=35  Identities=20%  Similarity=0.608  Sum_probs=17.8

Q ss_pred             ccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccC
Q psy8183          52 YKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYT   93 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~   93 (223)
                      |.|. |+.   ....+.+|.++|.++   ++|.|..|+..|.
T Consensus       120 Y~C~-C~~---~~~~~rrH~ri~~g~---~~YrC~~C~~~l~  154 (160)
T PRK04860        120 YRCK-CQE---HQLTVRRHNRVVRGE---AVYRCRRCGETLV  154 (160)
T ss_pred             EEcC-CCC---eeCHHHHHHHHhcCC---ccEECCCCCceeE
Confidence            5554 544   344455555555554   4555555555444

>PRK04860 hypothetical protein; Provisional

Probab=96.27  E-value=0.0025  Score=47.40  Aligned_cols=39  Identities=26%  Similarity=0.738  Sum_probs=33.7

Q ss_pred             CeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCch
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDET   65 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~   65 (223)
                      +|.|.   |++   ....+.+|.++|.++++|.|..|+..|....
T Consensus       119 ~Y~C~---C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK---CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC---CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            58994   987   6778999999999999999999999886543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.97  E-value=0.0063  Score=29.87  Aligned_cols=22  Identities=50%  Similarity=0.859  Sum_probs=12.4

Q ss_pred             eecccCccccccCChHHHHHHHHHh
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      |.|+.  |+.... +..|.+|++.+
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhh
Confidence            55655  666665 66666666654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.92  E-value=0.0024  Score=32.48  Aligned_cols=22  Identities=32%  Similarity=0.742  Sum_probs=12.7

Q ss_pred             ccCCccCCccCChHHHHHHHhh
Q psy8183          83 HICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      |.|.+|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4466666666666666655543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=95.92  E-value=0.0043  Score=58.97  Aligned_cols=57  Identities=28%  Similarity=0.491  Sum_probs=41.9

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHH-hC------------------------CCCCccCCcCcccccCchhHHh
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRC-HQ------------------------TDKPYKCNSCYKCFVDETALLE   69 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~-h~------------------------~~k~~~C~~C~~~f~~~~~l~~   69 (223)
                      .|+-.|-|+|+.  |+..|+....|..|||. |.                        +.++|.|..|...+..+.+|..
T Consensus       459 L~S~~kt~~cpk--c~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsi  536 (1406)
T KOG1146|consen  459 LHSFFKTLKCPK--CNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSI  536 (1406)
T ss_pred             eecccccccCCc--cchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHH
Confidence            355567788966  99999999999999886 32                        1356777777777777777777


Q ss_pred             hhhh
Q psy8183          70 HIPK   73 (223)
Q Consensus        70 H~~~   73 (223)
                      |+..
T Consensus       537 hlqS  540 (1406)
T KOG1146|consen  537 HLQS  540 (1406)
T ss_pred             HHHH
Confidence            7764

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.91  E-value=0.0059  Score=30.23  Aligned_cols=21  Identities=38%  Similarity=0.766  Sum_probs=12.8

Q ss_pred             eecccCccccccCChHHHHHHHH
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSR   44 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~   44 (223)
                      |.|+.  |++.|.+...|+.|++
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHT
T ss_pred             CCCCC--CCCCcCCHHHHHHHHC
Confidence            45655  6666666666666655

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.89  E-value=0.0042  Score=31.54  Aligned_cols=22  Identities=32%  Similarity=0.776  Sum_probs=14.3

Q ss_pred             ccCCcCcccccCchhHHhhhhh
Q psy8183          52 YKCNSCYKCFVDETALLEHIPK   73 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~   73 (223)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5566666666666666666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.44  E-value=0.014  Score=29.06  Aligned_cols=21  Identities=29%  Similarity=0.654  Sum_probs=14.9

Q ss_pred             ccCCccCCccCChHHHHHHHhh
Q psy8183          83 HICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      ..|.+||+.| ..+.|.+|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3577788888 56677777764

>KOG1146|consensus

Probab=95.14  E-value=0.0072  Score=57.54  Aligned_cols=76  Identities=22%  Similarity=0.273  Sum_probs=60.4

Q ss_pred             cccccCChHHHHHHHH-HhCCCCCccCCcCcccccCchhHHhhhhhhcCCC----------------------CCCcccC
Q psy8183          29 CVKAFSQLSNLQSHSR-CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK----------------------HLKTHIC   85 (223)
Q Consensus        29 C~k~f~~~~~L~~H~~-~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~----------------------~~k~~~C   85 (223)
                      |+..+.+...+..|+. .++-.+-|+|+.|+..|.....|..|||..+.+.                      +.++|.|
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C  521 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPC  521 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccc
Confidence            5555666666666655 3666788999999999999999999999832221                      3488999


Q ss_pred             CccCCccCChHHHHHHHhh
Q psy8183          86 QYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        86 ~~C~~~f~~~~~l~~H~~~  104 (223)
                      ..|...+..+..|.+|+..
T Consensus       522 ~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  522 RACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             eeeeeeeecchHHHHHHHH
Confidence            9999999999999999864

>KOG2893|consensus

Probab=95.03  E-value=0.006  Score=47.48  Aligned_cols=41  Identities=29%  Similarity=0.593  Sum_probs=21.7

Q ss_pred             cccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhh
Q psy8183          24 CRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEH   70 (223)
Q Consensus        24 C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H   70 (223)
                      |=+  |++-|.+..-|.+|++.    |-|+|-+|.+...+-..|..|
T Consensus        13 cwy--cnrefddekiliqhqka----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWY--CNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eee--cccccchhhhhhhhhhh----ccceeeeehhhhccCCCceee
Confidence            444  66666666655555543    235666665554444444444

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.66  E-value=0.006  Score=52.13  Aligned_cols=47  Identities=40%  Similarity=0.662  Sum_probs=22.7

Q ss_pred             cccccCChHHHHHHHH--HhCCC--CCccCC--cCcccccCchhHHhhhhhhc
Q psy8183          29 CVKAFSQLSNLQSHSR--CHQTD--KPYKCN--SCYKCFVDETALLEHIPKHK   75 (223)
Q Consensus        29 C~k~f~~~~~L~~H~~--~h~~~--k~~~C~--~C~~~f~~~~~l~~H~~~h~   75 (223)
                      |...|.+...|..|.+  .|.++  +++.|+  .|++.|.+...+.+|...|.
T Consensus       295 ~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         295 CNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHT  347 (467)
T ss_pred             ccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccccc
Confidence            4444444444444444  44444  444444  34444444444444444443

>KOG2231|consensus

Probab=94.30  E-value=0.077  Score=47.84  Aligned_cols=88  Identities=23%  Similarity=0.452  Sum_probs=47.3

Q ss_pred             CccHHHHHHHHHhCCCCCC----eecccCccccccCChHHHHHHHHHhCCCCCccCCcC------cccccCchhHHhhhh
Q psy8183           3 LAGQELTMEIRRTHTGDKP----YKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC------YKCFVDETALLEHIP   72 (223)
Q Consensus         3 f~~~~~~~~h~~~H~~~k~----~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C------~~~f~~~~~l~~H~~   72 (223)
                      |...++++++|..-.+++.    -.|..  |...|.....|.+|++.++    |.|-.|      +..|...+.|..|.+
T Consensus       160 Yt~~el~~h~~~gd~d~~s~rGhp~C~~--C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR  233 (669)
T KOG2231|consen  160 YTRAELNLHLMFGDPDDESCRGHPLCKF--CHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFR  233 (669)
T ss_pred             ehHHHHHHHHhcCCCccccccCCccchh--hhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhh
Confidence            3444454444443332222    24666  7777777777777777544    344444      345555666777766


Q ss_pred             hhcCCCCCCcccCC--ccC-CccCChHHHHHHHh
Q psy8183          73 KHKDSKHLKTHICQ--YCG-KSYTQETYLSKHMQ  103 (223)
Q Consensus        73 ~h~~~~~~k~~~C~--~C~-~~f~~~~~l~~H~~  103 (223)
                      .+|       |.|.  .|. +.|.....+..+++
T Consensus       234 ~~H-------flCE~~~C~~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  234 KGH-------FLCEEEFCRTKKFYVAFELEIELK  260 (669)
T ss_pred             hcC-------ccccccccccceeeehhHHHHHHH
Confidence            655       4465  353 34444444444444

>KOG4173|consensus

Probab=94.26  E-value=0.018  Score=43.84  Aligned_cols=83  Identities=20%  Similarity=0.480  Sum_probs=65.8

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcC-------CCCCCcccCCc--cC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKD-------SKHLKTHICQY--CG   89 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~-------~~~~k~~~C~~--C~   89 (223)
                      .+.|.|+..||-..|.....+..|..+-++.   .|.+|.+.|.+.-.|..|+...+.       +...--|.|-+  |+
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            3558899999999999999889898765443   699999999999999999864332       11125689954  99


Q ss_pred             CccCChHHHHHHHhh
Q psy8183          90 KSYTQETYLSKHMQK  104 (223)
Q Consensus        90 ~~f~~~~~l~~H~~~  104 (223)
                      ..|.+....+.|+-.
T Consensus       154 ~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhhhhhHHHH
Confidence            999999999999754

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.10  E-value=0.035  Score=37.34  Aligned_cols=67  Identities=18%  Similarity=0.279  Sum_probs=21.9

Q ss_pred             CCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhc
Q psy8183           2 DLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHK   75 (223)
Q Consensus         2 ~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~   75 (223)
                      .|.+.+.+..|+....+-.   ..   ....+.....+..+++.-. ...+.|.+|++.|.+...|..||+.+.
T Consensus         8 ~f~~~~~l~~H~~~~H~~~---~~---~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    8 SFSSVDDLLQHMKKKHGFD---IP---DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             ccccccccccccccccccc---cc---ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            4677778888886443321   11   1122223444444444322 236899999999999999999998754

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.83  E-value=0.051  Score=29.13  Aligned_cols=23  Identities=22%  Similarity=0.626  Sum_probs=19.8

Q ss_pred             cccCCccCCccCChHHHHHHHhh
Q psy8183          82 THICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      +|.|.+|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2231|consensus

Probab=93.80  E-value=0.092  Score=47.38  Aligned_cols=92  Identities=21%  Similarity=0.349  Sum_probs=61.2

Q ss_pred             CccHHHHHHHH-HhCCC---------CCCeecccCccccccCChHHHHHHHHHh-CCCC----CccCCcCcccccCchhH
Q psy8183           3 LAGQELTMEIR-RTHTG---------DKPYKCRHPGCVKAFSQLSNLQSHSRCH-QTDK----PYKCNSCYKCFVDETAL   67 (223)
Q Consensus         3 f~~~~~~~~h~-~~H~~---------~k~~~C~~p~C~k~f~~~~~L~~H~~~h-~~~k----~~~C~~C~~~f~~~~~l   67 (223)
                      |.....|+.|+ ..|..         .+.|.|    |.+.|. ...|..|++.- .+++    --.|..|...|.....|
T Consensus       124 ~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~----e~k~Yt-~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el  198 (669)
T KOG2231|consen  124 FKSVENLKNHMRDQHKLHLCSLCLQNLKIFIN----ERKLYT-RAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDEL  198 (669)
T ss_pred             hhHHHHHHHHHHHhhhhhccccccccceeeee----eeeheh-HHHHHHHHhcCCCccccccCCccchhhhhhhccHHHH
Confidence            44566778888 45543         222333    444444 56677787642 2122    13699999999999999


Q ss_pred             HhhhhhhcCCCCCCcccCCcc------CCccCChHHHHHHHhhhc
Q psy8183          68 LEHIPKHKDSKHLKTHICQYC------GKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        68 ~~H~~~h~~~~~~k~~~C~~C------~~~f~~~~~l~~H~~~h~  106 (223)
                      .+|++.++.       .|..|      +.-|.....|..|.+..|
T Consensus       199 ~rH~~~~h~-------~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  199 YRHLRFDHE-------FCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             HHhhcccee-------heeecCcccccchhcccchHHHHHhhhcC
Confidence            999987774       35555      456778899999998765

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.69  E-value=0.018  Score=49.12  Aligned_cols=68  Identities=25%  Similarity=0.534  Sum_probs=55.6

Q ss_pred             CCccCCcCcccccCchhHHhhhh--hhcCCCCCCcccCC--ccCCccCChHHHHHHHhhhcccCCCCCCcCCC
Q psy8183          50 KPYKCNSCYKCFVDETALLEHIP--KHKDSKHLKTHICQ--YCGKSYTQETYLSKHMQKHAERSDKRPPIIGI  118 (223)
Q Consensus        50 k~~~C~~C~~~f~~~~~l~~H~~--~h~~~~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~c~~  118 (223)
                      .++.|..|...|.+...|.+|.+  .|.++. .+++.|.  +|++.|.+...+..|..+|.......+.....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGES-LKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNS  359 (467)
T ss_pred             cCCCCccccCCcccccccccccccccccccc-CCceeeeccCCCccccccccccCCcccccCCCccccccccC
Confidence            46889999999999999999999  677652 2688898  79999999999999999998877666654443

>KOG2482|consensus

Probab=93.14  E-value=0.084  Score=43.43  Aligned_cols=23  Identities=30%  Similarity=0.582  Sum_probs=21.0

Q ss_pred             CeecccCccccccCChHHHHHHHHH
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      .+.|-+  |.|.|..+..|+.||+.
T Consensus       195 r~~CLy--CekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  195 RLRCLY--CEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             hheeee--eccccCCcHHHHHHHHh
Confidence            478988  99999999999999985

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=92.11  E-value=0.22  Score=41.18  Aligned_cols=14  Identities=21%  Similarity=0.413  Sum_probs=7.9

Q ss_pred             ccCChHHHHHHHhh
Q psy8183          91 SYTQETYLSKHMQK  104 (223)
Q Consensus        91 ~f~~~~~l~~H~~~  104 (223)
                      .|.....|..|+-.
T Consensus       290 vf~~~~el~~h~~~  303 (493)
T COG5236         290 VFPYHTELLEHLTR  303 (493)
T ss_pred             EeccHHHHHHHHHH
Confidence            45556666666543

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.10  E-value=0.078  Score=28.26  Aligned_cols=9  Identities=33%  Similarity=0.741  Sum_probs=4.4

Q ss_pred             ccCCcCccc
Q psy8183          52 YKCNSCYKC   60 (223)
Q Consensus        52 ~~C~~C~~~   60 (223)
                      |.|.+||..
T Consensus         2 ~~C~~CGy~   10 (33)
T cd00350           2 YVCPVCGYI   10 (33)
T ss_pred             EECCCCCCE
Confidence            445555543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2186|consensus

Probab=91.75  E-value=0.076  Score=41.83  Aligned_cols=51  Identities=20%  Similarity=0.521  Sum_probs=33.5

Q ss_pred             ccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          52 YKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      |.|.+||.... +..+.+|+...++    .-|.|-.|++.|.+ .++..|..-.++.
T Consensus         4 FtCnvCgEsvK-Kp~vekH~srCrn----~~fSCIDC~k~F~~-~sYknH~kCITEa   54 (276)
T KOG2186|consen    4 FTCNVCGESVK-KPQVEKHMSRCRN----AYFSCIDCGKTFER-VSYKNHTKCITEA   54 (276)
T ss_pred             Eehhhhhhhcc-ccchHHHHHhccC----CeeEEeeccccccc-chhhhhhhhcchH
Confidence            56777776554 4556667777766    45777777777777 5666776554433

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=91.72  E-value=0.14  Score=35.46  Aligned_cols=30  Identities=30%  Similarity=0.710  Sum_probs=18.8

Q ss_pred             ccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCCh
Q psy8183          52 YKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQE   95 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~   95 (223)
                      ..|+.||++|.-           .+.   .|.+|++||..|.-.
T Consensus        10 R~Cp~CG~kFYD-----------Lnk---~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYD-----------LNK---DPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhcc-----------CCC---CCccCCCCCCccCcc
Confidence            467777777732           222   556677777777655

The function of members of this family is unknown.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.63  E-value=0.17  Score=27.04  Aligned_cols=22  Identities=18%  Similarity=0.588  Sum_probs=16.2

Q ss_pred             CeecccCccccccCChHHHHHHHH
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSR   44 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~   44 (223)
                      +|.|+.  |++.|.+...+..|++
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHC
Confidence            467777  8877777777777765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=91.37  E-value=0.064  Score=41.97  Aligned_cols=13  Identities=31%  Similarity=0.754  Sum_probs=9.9

Q ss_pred             ccCCccCCccCCh
Q psy8183          83 HICQYCGKSYTQE   95 (223)
Q Consensus        83 ~~C~~C~~~f~~~   95 (223)
                      .+|+.||.+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5799999877744

>KOG4124|consensus

Probab=90.10  E-value=0.049  Score=44.86  Aligned_cols=73  Identities=30%  Similarity=0.503  Sum_probs=45.4

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHH
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYL   98 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l   98 (223)
                      .++|.|..|.|.+.++....|+.|..+-+      |.--.  ...+ .-+-|.......   |+|+|++|.++++....|
T Consensus       347 ~~~~~~~vp~~~~~~~n~ng~~~~~~~~h------~s~i~--~~s~-~~~ph~~~~~~n---k~~r~~i~~~~~k~~~~l  414 (442)
T KOG4124|consen  347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGH------CSPIT--TPTP-APIPHQGFVVEN---KPYRCEVCSKRYKNLNGL  414 (442)
T ss_pred             cCCCCCCCCcchhhcccCcceeeccccCc------CCCCC--CCCC-CCCCcceeeecc---CcccChhhhhhhccCCCC
Confidence            57899999999999998888887755321      11100  0001 111222222223   889999999988887777


Q ss_pred             HHHHh
Q psy8183          99 SKHMQ  103 (223)
Q Consensus        99 ~~H~~  103 (223)
                      +-|.-
T Consensus       415 ~~~~~  419 (442)
T KOG4124|consen  415 KYHRT  419 (442)
T ss_pred             Cceee
Confidence            66543

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.08  E-value=0.85  Score=31.51  Aligned_cols=27  Identities=22%  Similarity=0.370  Sum_probs=23.5

Q ss_pred             CcccC----CccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHIC----QYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C----~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      .-|.|    ..|++.+.+...|.+|.+.+++
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            34899    9999999999999999988763

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=87.75  E-value=0.43  Score=33.02  Aligned_cols=33  Identities=33%  Similarity=0.667  Sum_probs=24.8

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCc
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDE   64 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~   64 (223)
                      |.| ..|+.  ||+.|...           +..|..|+.||..|.-.
T Consensus         7 GtK-R~Cp~--CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    7 GTK-RTCPS--CGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCc-ccCCC--CcchhccC-----------CCCCccCCCCCCccCcc
Confidence            444 47966  99999763           23688999999998766

The function of members of this family is unknown.

>KOG2893|consensus

Probab=87.25  E-value=0.21  Score=39.09  Aligned_cols=50  Identities=40%  Similarity=0.661  Sum_probs=38.2

Q ss_pred             CCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHH-Hhhhc
Q psy8183          49 DKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKH-MQKHA  106 (223)
Q Consensus        49 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~  106 (223)
                      .|+| |=+|++.|....-|.+|++.       |.|+|.+|.|..-+--.|..| +++|.
T Consensus         9 ~kpw-cwycnrefddekiliqhqka-------khfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen    9 DKPW-CWYCNREFDDEKILIQHQKA-------KHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             CCce-eeecccccchhhhhhhhhhh-------ccceeeeehhhhccCCCceeehhhhhh
Confidence            4666 88899999999999888753       558899999877666677777 44444

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=85.77  E-value=0.41  Score=25.68  Aligned_cols=9  Identities=22%  Similarity=0.604  Sum_probs=5.1

Q ss_pred             ccCCcCccc
Q psy8183          52 YKCNSCYKC   60 (223)
Q Consensus        52 ~~C~~C~~~   60 (223)
                      |+|.+||..
T Consensus         3 ~~C~~CG~i   11 (34)
T cd00729           3 WVCPVCGYI   11 (34)
T ss_pred             EECCCCCCE
Confidence            556666543

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=85.52  E-value=0.26  Score=36.38  Aligned_cols=12  Identities=42%  Similarity=0.952  Sum_probs=5.6

Q ss_pred             ccCCccCCccCC
Q psy8183          83 HICQYCGKSYTQ   94 (223)
Q Consensus        83 ~~C~~C~~~f~~   94 (223)
                      ++|..||++|..
T Consensus        29 ~~c~~c~~~f~~   40 (154)
T PRK00464         29 RECLACGKRFTT   40 (154)
T ss_pred             eeccccCCcceE
Confidence            444444444443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.56  E-value=0.48  Score=28.20  Aligned_cols=28  Identities=18%  Similarity=0.440  Sum_probs=20.7

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHH
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      --||..+.|+-  |+..|.+...+.+|...
T Consensus        12 RDGE~~lrCPR--C~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          12 RDGEEFLRCPR--CGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             cCCceeeeCCc--hhHHHHHhHHHHHHhhH
Confidence            45677778855  88888888888888764

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=83.67  E-value=0.45  Score=28.35  Aligned_cols=29  Identities=17%  Similarity=0.433  Sum_probs=17.6

Q ss_pred             CCCCccCCcCcccccCchhHHhhhhhhcC
Q psy8183          48 TDKPYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus        48 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      |+.-+.|+-|+..|.....+.+|...-++
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            44456666666666666666666654443

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=83.13  E-value=0.91  Score=32.09  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=20.7

Q ss_pred             ccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHH
Q psy8183          52 YKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYL   98 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l   98 (223)
                      ..|+.||++|..           .+.   .|..|++||..|.....+
T Consensus        10 r~Cp~cg~kFYD-----------Lnk---~p~vcP~cg~~~~~~~~~   42 (129)
T TIGR02300        10 RICPNTGSKFYD-----------LNR---RPAVSPYTGEQFPPEEAL   42 (129)
T ss_pred             ccCCCcCccccc-----------cCC---CCccCCCcCCccCcchhh
Confidence            468888877732           222   566788888777655333

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=82.96  E-value=0.74  Score=34.39  Aligned_cols=23  Identities=26%  Similarity=0.790  Sum_probs=15.5

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccC
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCG   89 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~   89 (223)
                      .|.|.+||+.             +-++   -|-+|++||
T Consensus       134 ~~vC~vCGy~-------------~~ge---~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT-------------HEGE---APEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc-------------ccCC---CCCcCCCCC
Confidence            5888888754             3344   667788887

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=82.34  E-value=1.2  Score=24.20  Aligned_cols=14  Identities=14%  Similarity=0.484  Sum_probs=6.8

Q ss_pred             cCCcCcccccCchh
Q psy8183          53 KCNSCYKCFVDETA   66 (223)
Q Consensus        53 ~C~~C~~~f~~~~~   66 (223)
                      .|+.|+..|.-.+.
T Consensus         4 ~Cp~C~~~y~i~d~   17 (36)
T PF13717_consen    4 TCPNCQAKYEIDDE   17 (36)
T ss_pred             ECCCCCCEEeCCHH
Confidence            45555555544443

>KOG4124|consensus

Probab=82.20  E-value=0.31  Score=40.29  Aligned_cols=45  Identities=22%  Similarity=0.303  Sum_probs=32.3

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhh-------------------cccCCCCCCcCCCCCcccCC
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKH-------------------AERSDKRPPIIGIPRAALEN  125 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h-------------------~~~~~~~~~~c~~~~~~~~~  125 (223)
                      ++|.|.+  |.+.++....|+.|...-                   ...++++|++|.........
T Consensus       348 ~~~~~~vp~~~~~~~n~ng~~~~~~~~h~s~i~~~s~~~~ph~~~~~~nk~~r~~i~~~~~k~~~~  413 (442)
T KOG4124|consen  348 KPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYKNLNG  413 (442)
T ss_pred             CCCCCCCCcchhhcccCcceeeccccCcCCCCCCCCCCCCCcceeeeccCcccChhhhhhhccCCC
Confidence            7899976  999999988888886431                   13466888888776554433

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=82.17  E-value=1.2  Score=27.05  Aligned_cols=32  Identities=19%  Similarity=0.389  Sum_probs=19.5

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCC
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGK   90 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~   90 (223)
                      .|.|+.||..-..+..--   | ..+    .+|+|+.||.
T Consensus        27 ~F~CPnCGe~~I~Rc~~C---R-k~g----~~Y~Cp~CGF   58 (61)
T COG2888          27 KFPCPNCGEVEIYRCAKC---R-KLG----NPYRCPKCGF   58 (61)
T ss_pred             EeeCCCCCceeeehhhhH---H-HcC----CceECCCcCc
Confidence            478888886555443321   1 223    6788888885

>PHA00626 hypothetical protein

Probab=82.14  E-value=0.69  Score=27.60  Aligned_cols=14  Identities=21%  Similarity=0.591  Sum_probs=8.9

Q ss_pred             CcccCCccCCccCC
Q psy8183          81 KTHICQYCGKSYTQ   94 (223)
Q Consensus        81 k~~~C~~C~~~f~~   94 (223)
                      ..|+|..||+.|+.
T Consensus        22 nrYkCkdCGY~ft~   35 (59)
T PHA00626         22 DDYVCCDCGYNDSK   35 (59)
T ss_pred             cceEcCCCCCeech
Confidence            45777777766653

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=82.00  E-value=1.9  Score=32.03  Aligned_cols=19  Identities=11%  Similarity=0.251  Sum_probs=8.9

Q ss_pred             CCCeecccCccccccCChHHH
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNL   39 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L   39 (223)
                      ..-|.|+.  |+..|+....+
T Consensus       107 ~~~Y~Cp~--c~~r~tf~eA~  125 (158)
T TIGR00373       107 NMFFICPN--MCVRFTFNEAM  125 (158)
T ss_pred             CCeEECCC--CCcEeeHHHHH
Confidence            34455533  55555544444

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>smart00614 ZnF_BED BED zinc finger

Probab=81.32  E-value=1.1  Score=26.17  Aligned_cols=21  Identities=33%  Similarity=0.942  Sum_probs=14.1

Q ss_pred             ccCCccCCccCCh-----HHHHHHHh
Q psy8183          83 HICQYCGKSYTQE-----TYLSKHMQ  103 (223)
Q Consensus        83 ~~C~~C~~~f~~~-----~~l~~H~~  103 (223)
                      -.|.+|++.+...     +.|.+|++
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            3577777766654     57777776

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=81.05  E-value=1.5  Score=32.65  Aligned_cols=32  Identities=19%  Similarity=0.375  Sum_probs=19.9

Q ss_pred             CCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCc
Q psy8183          48 TDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKS   91 (223)
Q Consensus        48 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~   91 (223)
                      +..-|.|+.|+..|+...++.            ..|.|+.||..
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~------------~~F~Cp~Cg~~  137 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME------------LNFTCPRCGAM  137 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH------------cCCcCCCCCCE
Confidence            344577777777776666653            13677777753

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=80.83  E-value=3.2  Score=28.59  Aligned_cols=56  Identities=25%  Similarity=0.429  Sum_probs=42.4

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHH-hCCC-----------------------------------------CCccC-
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRC-HQTD-----------------------------------------KPYKC-   54 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~-h~~~-----------------------------------------k~~~C-   54 (223)
                      .-+...|..  |+.+..- ..+..|.+. |+..                                         .-|.| 
T Consensus         8 ~~~vlIC~~--C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~   84 (109)
T PF12013_consen    8 EYRVLICRQ--CQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQ   84 (109)
T ss_pred             cCCEEEeCC--CCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeee
Confidence            345678988  9887765 778888874 4310                                         12889 


Q ss_pred             ---CcCcccccCchhHHhhhhhhcC
Q psy8183          55 ---NSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus        55 ---~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                         ..|++.+.+...+.+|.+.+++
T Consensus        85 ~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   85 CDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             cCCCCCCcEeccHHHHHHHHHHhcC
Confidence               9999999999999999988774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=80.79  E-value=8.8  Score=32.07  Aligned_cols=74  Identities=19%  Similarity=0.335  Sum_probs=47.1

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCCC----CccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCC----
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK----PYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGK----   90 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k----~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~----   90 (223)
                      .+.|.|+.     ..-++..|..|...-..+.    --.|..|...|...+.|..|++..+.    +   |.+|++    
T Consensus       189 Kk~F~~E~-----~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE----~---ChICD~v~p~  256 (493)
T COG5236         189 KKDFWNEI-----RLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHE----A---CHICDMVGPI  256 (493)
T ss_pred             cccCccce-----eeeecccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhhh----h---hhhhhccCcc
Confidence            45566543     2234556777755322221    13588999999999999999987764    3   555553    


Q ss_pred             ---ccCChHHHHHHHhh
Q psy8183          91 ---SYTQETYLSKHMQK  104 (223)
Q Consensus        91 ---~f~~~~~l~~H~~~  104 (223)
                         -|.....|..|.+.
T Consensus       257 ~~QYFK~Y~~Le~HF~~  273 (493)
T COG5236         257 RYQYFKSYEDLEAHFRN  273 (493)
T ss_pred             chhhhhCHHHHHHHhhc
Confidence               36677788888764

>KOG2482|consensus

Probab=80.49  E-value=3.6  Score=34.19  Aligned_cols=24  Identities=33%  Similarity=0.728  Sum_probs=21.3

Q ss_pred             CcccCCccCCccCChHHHHHHHhh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      ..+.|-+|.+.|..+..|+.||+.
T Consensus       194 ~r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  194 ERLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             hhheeeeeccccCCcHHHHHHHHh
Confidence            347899999999999999999986

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=80.02  E-value=1.5  Score=33.22  Aligned_cols=30  Identities=23%  Similarity=0.472  Sum_probs=18.0

Q ss_pred             CCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCc
Q psy8183          50 KPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKS   91 (223)
Q Consensus        50 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~   91 (223)
                      .-|.|+.|+..|+....+.            ..|.|+.||-.
T Consensus       116 ~~Y~Cp~C~~rytf~eA~~------------~~F~Cp~Cg~~  145 (178)
T PRK06266        116 MFFFCPNCHIRFTFDEAME------------YGFRCPQCGEM  145 (178)
T ss_pred             CEEECCCCCcEEeHHHHhh------------cCCcCCCCCCC
Confidence            4467777777666555531            23677777753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	223
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-13
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-12
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-09
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		1e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-08
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-08
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-08
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-08
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		9e-08
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		5e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		7e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-06
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		8e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-05
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-05
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		5e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		5e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-05
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		7e-04
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 10  MEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLE 69
            E +RTHTG+KPYKC  P C K+FS   +L  H R H  +KPYKC  C K F     L  
Sbjct: 38  AEHQRTHTGEKPYKC--PECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRA 95
Query: 70  HIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAALENPH 127
           H   H      K + C  CGKS++Q  +L  H + H      + P  G   +  +N H
Sbjct: 96  HQRTHTGE---KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLH 150

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 19  DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
           +KPYKC  P C K+FSQ SNLQ H R H  +KPYKC  C K F   + L +H   H   K
Sbjct: 2   EKPYKC--PECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEK 59
Query: 79  HLKTHICQYCGKSYTQETYLSKHMQKHAER 108
             K   C  CGKS+++  +LS+H + H  +
Sbjct: 60  PYK---CPECGKSFSRSDHLSRHQRTHQNK 86

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 8   LTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC--NSCYKCFVDET 65
           L + +RR HTG+KP+KC   GC K++S+L NL++H R H  +KPY C    C K F + +
Sbjct: 55  LVVHMRR-HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNAS 113
Query: 66  ALLEHIPKHKDSKHLKTHICQY--CGKSYTQETYLSKHMQ 103
              +H  +++   + K ++C+   C K YT  + L KH++
Sbjct: 114 DRAKH--QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 10  MEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC--NSCYKCFVDETAL 67
           +E RR H       C +PGC K +++ S+L++H R H  +KPYKC    C   F     L
Sbjct: 10  LEKRRIHY------CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63
Query: 68  LEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
             H  KH  +K  +   C  C +S+++  +L+ HM++H
Sbjct: 64  TRHYRKHTGAKPFQ---CGVCNRSFSRSDHLALHMKRH 98

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 15  THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC--NSCYKCFVDETALLEHIP 72
            HTG+KP++C   GC K FS   NL++H R H  D+PY C  + C K F   T L  HI 
Sbjct: 56  VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115
Query: 73  KHKDSK 78
            H  +K
Sbjct: 116 THAKAK 121

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 21  PYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHL 80
           P+KC    C K FS+   L++H RCH   KPYKC +C     D ++L +H+  H D +  
Sbjct: 8   PHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65
Query: 81  KTHICQYCGKSYTQETYLSKHMQKHAERS 109
           K  IC Y  ++ +Q   L+ H++ H   S
Sbjct: 66  KCQICPYASRNSSQ---LTVHLRSHTGDS 91

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 19  DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
           ++PY C    C + FSQ +NL +H R H   KP++C  C + F   T L +HI  H   K
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 79  HLKTHICQYCGKSYTQETYLSKHMQKHAERSD 110
                 C  CG+ +       +H + H  + D
Sbjct: 62  PF---ACDICGRKFATLHTRDRHTKIHLRQKD 90

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 19  DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
           ++PY C    C + FSQ +NL +H R H   KP++C  C + F  + +L  HI  H   K
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 79  HLKTHICQYCGKSYTQETYLSKHMQKHAERSD 110
                 C  CG+ +      ++H + H  + D
Sbjct: 62  PF---ACDICGRKFATLHTRTRHTKIHLRQKD 90

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC--NSCYKCFVDETALLEHI 71
           R HTG+KP+ C  PGC K F++  NL+ H R H  +KP+KC    C + F + +   +H+
Sbjct: 83  RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142
Query: 72  PKHKDSK 78
             H   K
Sbjct: 143 HVHTSDK 149

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 20  KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHIPKHKDS 77
           +P+ C +PGC K + +LS+LQ HSR H  +KPY+C+   C + F     L  H  +H   
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG- 63
Query: 78  KHLKTHICQYCGKSYTQETYLSKHMQKHA 106
             +K   C+ C + +++  +L  H + H 
Sbjct: 64  --VKPFQCKTCQRKFSRSDHLKTHTRTHT 90

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 19  DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
           ++PY C    C + FS  SNL  H R H   KP++C  C + F     L  HI  H   K
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 79  HLKTHICQYCGKSYTQETYLSKHMQKHAERSD 110
                 C  CG+ + +     +H + H  + D
Sbjct: 62  PF---ACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 19  DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
           ++PY C    C + FSQ  +L  H R H   KP++C  C + F     L  HI  H   K
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 79  HLKTHICQYCGKSYTQETYLSKHMQKHAERSD 110
                 C  CG+ + +     +H + H  + D
Sbjct: 62  PF---ACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
          RTHTG+KPY C   GC   F++   L  H R H   +P++C  C + F     L  H+ +
Sbjct: 29 RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 88
Query: 74 H 74
          H
Sbjct: 89 H 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
          RTHTG+KPY C   GC   F++   L  H R H   +P++C  C + F     L  H+ +
Sbjct: 28 RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87
Query: 74 H 74
          H
Sbjct: 88 H 88

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 19  DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
           ++PY C    C + FS+ ++L  H R H   KP++C  C + F     L  HI  H   K
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 79  HLKTHICQYCGKSYTQETYLSKHMQKHAERSD 110
                 C  CG+ + +     +H + H  + D
Sbjct: 62  PF---ACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 16  HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS--CYKCFVDETALLEHIPK 73
           HTG+KP+ C+  GC K F+ L +L  HS  H  +K + C+S  C   F  +  + +H  +
Sbjct: 37  HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR 96
Query: 74  HKDSKHLKTHICQY--CGKSYTQETYLSKHMQKHAER 108
             + K +  ++C +  CGK++ +   L  H   H ++
Sbjct: 97  FHNIK-ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 19  DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
           ++PY C    C + FS+ + L  H R H   KP++C  C + F     L  HI  H   K
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 79  HLKTHICQYCGKSYTQETYLSKHMQKHAERSD 110
                 C  CG+ + +     +H + H  + D
Sbjct: 62  PF---ACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 19  DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
           ++PY C    C + FS+   L  H R H   KP++C  C + F     L  HI  H   K
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 79  HLKTHICQYCGKSYTQETYLSKHMQKHAERSD 110
                 C  CG+ + +     +H + H  + D
Sbjct: 62  PF---ACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          +KPY C    C KAFS+ S L  H R H  +KPYKC  C K F   + L+ H
Sbjct: 12 EKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS 77
          + YKC    C K+FS  S+L  H R H  +KPYKC+ C K F+  + L+ H   H  S
Sbjct: 17 RRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS 72

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 29  CVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC 88
           C + F++  NL  H R H  ++PY C+ C+K F  +  L +H   H   K  K   CQ C
Sbjct: 23  CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK---CQEC 79
Query: 89  GKSYTQETYLSKHMQKHAERS 109
           GK + Q   L+ H   H + S
Sbjct: 80  GKGFCQSRTLAVHKTLHMQTS 100

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 7  ELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETA 66
          ELT  IR  HTG KP++CR   C++ FS+  +L +H R H  +KP+ C+ C + F     
Sbjct: 20 ELTRHIR-IHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDE 76
Query: 67 LLEHIPKH 74
             H   H
Sbjct: 77 RKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 7  ELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETA 66
          ELT  IR  HTG KP++CR   C++ FS+  +L +H R H  +KP+ C+ C + F     
Sbjct: 21 ELTRHIR-IHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDE 77
Query: 67 LLEHIPKH 74
             H   H
Sbjct: 78 RKRHTKIH 85

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 29  CVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC 88
           C K+F + S L +H   H   +PY C  C K F  ++ + +H   H      K H CQ C
Sbjct: 7   CGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE---KPHKCQVC 63
Query: 89  GKSYTQETYLSKHMQKHA 106
           GK+++Q + L  H +KH 
Sbjct: 64  GKAFSQSSNLITHSRKHT 81

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 29  CVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC 88
           C K F  + +L  H   H  +KPY C  C   F  +  +  H+  H D    K +ICQ C
Sbjct: 13  CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH-DGSVGKPYICQSC 71
Query: 89  GKSYTQETYLSKHMQK 104
           GK +++  +L+ H+++
Sbjct: 72  GKGFSRPDHLNGHIKQ 87

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 27  PGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ 86
           P C K F     L+ H+R H  +KP++C  C KC+  +  LLEH  ++  ++  +   C 
Sbjct: 11  PTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS 70
Query: 87  YCGKSYTQETYLSKHMQKHA 106
            C +++ +   L  HM  H 
Sbjct: 71  VCQETFRRRMELRLHMVSHT 90

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
          HTG+KP+ C+  GC K F+ L +L  HS  H  +K + C+S
Sbjct: 28 HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDS 68

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
          DKPYKC    C  +F    NL SH   H  +KPY+CN C   F     L  H   H   K
Sbjct: 15 DKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 41  SHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHL-KTHICQYCGKSYTQETYLS 99
           S  R H  +KPY C+ C K F  +  L  H  ++ D   +    +C  CGK++T+   ++
Sbjct: 5   SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMA 64
Query: 100 KHMQKHA 106
           +H    A
Sbjct: 65  RHADNCA 71

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	223
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-23
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-19
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-22
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-21
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-19
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-20
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-17
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-16
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-17
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-17
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-17
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-16
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-17
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-17
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-16
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-17
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-16
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-16
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-16
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-16
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-16
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-16
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-13
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-14
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-13
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	7e-13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-13
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	7e-13
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-12
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-12
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-12
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-12
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-12
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-10
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	8e-09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	8e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	8e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	4e-05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	7e-05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-04
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	5e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-04

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 89.0 bits (222), Expect = 2e-23
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 15  THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKH 74
           +     P+KC    C K FS+   L++H RCH   KPYKC +C     D ++L +H+  H
Sbjct: 2   SSGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

Query: 75  KDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
            D +  K   CQ C  +    + L+ H++ H
Sbjct: 60  SDERPFK---CQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 72.5 bits (179), Expect = 5e-17
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
           R HTG KPYKC+   C  A +  S+L  H R H  ++P+KC  C     + + L  H
Sbjct: 28 MRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 60.9 bits (149), Expect = 1e-12
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
           R H+ ++P+KC+   C  A    S L  H R H  D     
Sbjct: 56 LRIHSDERPFKCQI--CPYASRNSSQLTVHLRSHTGDSGPSS 95

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 89.1 bits (222), Expect = 3e-23
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           R HTG+KPY+C    C + FS+   L+ H R H   KP++C +C + F     L  H   
Sbjct: 29  RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRT 88

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
           H   K         C K + +   L +H   H
Sbjct: 89  HTGEKPFSCRWPS-CQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 79.5 bits (197), Expect = 2e-19
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 17/97 (17%)

Query: 17  TGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS--CYKCFVDETALLEHIPKH 74
           +  +P+ C +PGC K + +LS+LQ HSR H  +KPY+C+   C + F     L       
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQL------- 54

Query: 75  KDSKHLKTH------ICQYCGKSYTQETYLSKHMQKH 105
              +H + H       C+ C + +++  +L  H + H
Sbjct: 55  --KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 56.4 bits (137), Expect = 9e-11
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH 46
            RTHTG+KP+ CR P C K F++   L  H   H
Sbjct: 86  TRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 88.4 bits (220), Expect = 2e-22
 Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 10/98 (10%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHI 71
           R HTG+KP+KC   GC K++S+L NL++H R H  +KPY C    C K F    +     
Sbjct: 60  RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAF----SNASDR 115

Query: 72  PKHKDSKHL--KTHICQY--CGKSYTQETYLSKHMQKH 105
            KH++  H   K ++C+   C K YT  + L KH++  
Sbjct: 116 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH 46
            RTH+ +KPY C+ PGC K ++  S+L+ H +  
Sbjct: 120 NRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 11/94 (11%)

Query: 20  KPYKCRHPGCVKAFSQLSNLQSH---SRCHQTDKPYKCNSC-----YKCFVDETALLEHI 71
              +    GC + F     L  H      H   K + C+        + F  +  L+ H+
Sbjct: 2   TDCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM 59

Query: 72  PKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
            +H   K  K      C KSY++   L  H++ H
Sbjct: 60  RRHTGEKPHKCTFEG-CRKSYSRLENLKTHLRSH 92

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 82.5 bits (205), Expect = 7e-21
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 16  HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHK 75
            +G     C    C K F  + +L  H   H  +KPY C  C   F  +  +  H+  H 
Sbjct: 2   SSGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH- 58

Query: 76  DSKHLKTHICQYCGKSYTQETYLSKHMQK 104
           D    K +ICQ CGK +++  +L+ H+++
Sbjct: 59  DGSVGKPYICQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH--QTDKPYKCNSCYKCFVDETALLEH 70
          + +H+G+KPY C    C   F +   +  H R H     KPY C SC K F     L  H
Sbjct: 27 KLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH 84

Query: 71 I 71
          I
Sbjct: 85 I 85

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 82.1 bits (204), Expect = 1e-20
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
           R      K + C+   C + F++  NL  H R H  ++PY C+ C+K F  +  L +H  
Sbjct: 9   RLPSKTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY 66

Query: 73  KHKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
            H   K  K   CQ CGK + Q   L+ H   H
Sbjct: 67  IHSKEKPFK---CQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           R  H+ +KP+KC+   C K F Q   L  H   H         S
Sbjct: 65  RYIHSKEKPFKCQE--CGKGFCQSRTLAVHKTLHMQTSSPTAAS 106

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 49.7 bits (120), Expect = 2e-08
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 37  SNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQET 96
           S         +T K + C  C + F     LL H   H D +      C  C K++ ++ 
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT---CDICHKAFRRQD 59

Query: 97  YLSKHMQKH 105
           +L  H   H
Sbjct: 60  HLRDHRYIH 68

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 83.3 bits (207), Expect = 4e-20
 Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 17/98 (17%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
               G+KPY C    C K+FS+  +L  H R H  +KPYKC  C K F D+  L      
Sbjct: 14  ALEPGEKPYACPE--CGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL------ 65

Query: 74  HKDSKHLKTH------ICQYCGKSYTQETYLSKHMQKH 105
              ++H +TH       C  CGKS++Q   L  H + H
Sbjct: 66  ---TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 82.5 bits (205), Expect = 6e-20
 Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 17/99 (17%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
           +RTHTG+KPY C    C K+FSQL++L++H R H  +KPYKC  C K F  E  L     
Sbjct: 97  QRTHTGEKPYACPE--CGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL----- 149

Query: 73  KHKDSKHLKTH------ICQYCGKSYTQETYLSKHMQKH 105
                 H +TH       C  CGKS+++   L+ H + H
Sbjct: 150 ----HTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 80.6 bits (200), Expect = 3e-19
 Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
           +RTHTG+KPYKC    C K+FSQ +NL++H R H  +KPY C  C K F     L  H  
Sbjct: 69  QRTHTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR 126

Query: 73  KHKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
            H      K + C  CGKS+++E  L  H + H
Sbjct: 127 THTGE---KPYKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 54.0 bits (131), Expect = 3e-09
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 32  AFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTH------IC 85
           +    S+  + +     +KPY C  C K F     L         ++H +TH       C
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHL---------AEHQRTHTGEKPYKC 52

Query: 86  QYCGKSYTQETYLSKHMQKH 105
             CGKS++ +  L++H + H
Sbjct: 53  PECGKSFSDKKDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 50.5 bits (122), Expect = 4e-08
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKP 51
           +RTHTG+KPYKC    C K+FS+   L  H R H   K 
Sbjct: 153 QRTHTGEKPYKCPE--CGKSFSRRDALNVHQRTHTGKKT 189

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 80.6 bits (200), Expect = 7e-20
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 6/92 (6%)

Query: 16  HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHK 75
            +G    +C    C K F     L+ H+R H  +KP++C  C KC+  +  LLEH  + +
Sbjct: 2   SSGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH--EAR 57

Query: 76  DSKHL--KTHICQYCGKSYTQETYLSKHMQKH 105
           +  +   +   C  C +++ +   L  HM  H
Sbjct: 58  NCMNRSEQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 80.6 bits (200), Expect = 7e-20
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQT---DKPYKCNSCYKCFVDETALLEH 70
           R HTG+KP++C    C K + +  NL  H   +     ++ + C+ C + F     L  H
Sbjct: 28  RKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH 85

Query: 71  IPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQK 104
           +  H      K   C  C + + Q+  L  HM K
Sbjct: 86  MVSHTGEMPYK---CSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 67.1 bits (165), Expect = 1e-14
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 10  MEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLE 69
                 +  ++ + C    C + F +   L+ H   H  + PYKC+SC + F+ +  L  
Sbjct: 55  EARNCMNRSEQVFTCSV--CQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQS 112

Query: 70  H 70
           H
Sbjct: 113 H 113

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 82.3 bits (204), Expect = 9e-20
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHI 71
             HTG+KP+ C+  GC K F+ L +L  HS  H  +K + C+   C   F  +  + +H 
Sbjct: 35  CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF 94

Query: 72  PKHKDSKHLKTHICQY--CGKSYTQETYLSKHMQKH 105
            +  + K    ++C +  CGK++ +   L  H   H
Sbjct: 95  NRFHNIKI-CVYVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 78.8 bits (195), Expect = 2e-18
 Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 19/102 (18%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHI 71
                 K Y C    C  A+++   LQ+H   H  +KP+ C    C K F     L    
Sbjct: 5   ALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL---- 60

Query: 72  PKHKDSKHLKTH------IC--QYCGKSYTQETYLSKHMQKH 105
                ++H  TH       C    C   +T +  + KH  + 
Sbjct: 61  -----TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 75.7 bits (187), Expect = 2e-17
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 8/100 (8%)

Query: 13  RRTHTGDK--PYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALL 68
                  K   Y C    C KAF + + L+ H   H    PY+C    C K F   + L 
Sbjct: 94  FNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK 153

Query: 69  EHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQK-HAE 107
            H   H      K   C + GK++T      KH+ + H +
Sbjct: 154 RHEKVHAGYPCKKDDSCSFVGKTWTL---YLKHVAECHQD 190

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 76.4 bits (189), Expect = 1e-18
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 3/86 (3%)

Query: 20  KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKH 79
           +PY C    C + FSQ  +L  H R H   KP++C  C + F     L  HI  H   K 
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 80  LKTHICQYCGKSYTQETYLSKHMQKH 105
                C  CG+ + +     +H + H
Sbjct: 63  FA---CDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 70.6 bits (174), Expect = 2e-16
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          R HTG KP++CR   C++ FS+  +L +H R H  +KP+ C+ C + F        H
Sbjct: 27 RIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 75.3 bits (186), Expect = 3e-18
 Identities = 13/54 (24%), Positives = 21/54 (38%)

Query: 8  LTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF 61
          L    +  H   K + C  P C K+F+   +L+ H + H   + Y C       
Sbjct: 25 LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 71.8 bits (177), Expect = 5e-17
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQT-DKPYKCN--SCYKCFVDETALLEHIP 72
           +G     C  PGC + FS    L  H +      K + C   +C K F  +  L EH+ 
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 73 KHKDSKHLKTHICQYCGKSY 92
           H D++    +IC++ G S 
Sbjct: 62 LHSDTRD---YICEFSGPSS 78

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 75.9 bits (188), Expect = 3e-18
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
              +GDK Y C+   C K+F+  S    H   H   +PY C  C K F  +  L+ H+  
Sbjct: 3   SGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 59

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHM 102
           H   K  +   C  C K +       +H+
Sbjct: 60  HTGIKPYE---CNICAKRFMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 75.9 bits (188), Expect = 3e-18
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 11/89 (12%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
              H G +PY C    C K F    +L  H + H   KPY+CN C K F+   +   H+ 
Sbjct: 29  MSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV- 85

Query: 73  KHKDSKHL--KTHICQYCGKSYTQETYLS 99
                     K++      ++ T+ +  S
Sbjct: 86  ------TSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.0 bits (100), Expect = 1e-05
 Identities = 5/29 (17%), Positives = 10/29 (34%), Gaps = 2/29 (6%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQS 41
           R   +  K Y+       +  ++ S   S
Sbjct: 83  RHVTSCTKSYEAAK--AEQNTTEASGPSS 109

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 74.8 bits (185), Expect = 5e-18
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 9/71 (12%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
           RTHTG+KP+ C    C + F++    + H        P   +   +       L   + 
Sbjct: 23 IRTHTGEKPFACDI--CGRKFARSDERKRHRDIQ-HILPILEDKVEELLSKNYHLENEV- 78

Query: 73 KHKDSKHLKTH 83
                 LK  
Sbjct: 79 -----ARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 71.0 bits (175), Expect = 1e-16
 Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 20  KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKH 79
           KP++CR   C++ FS+  +L +H R H  +KP+ C+ C + F        H        H
Sbjct: 2   KPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ----H 55

Query: 80  LKTHICQYCGKSYTQETYLSKHMQ 103
           +   +     +  ++  +L   + 
Sbjct: 56  ILPILEDKVEELLSKNYHLENEVA 79

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 73.3 bits (181), Expect = 1e-17
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           + +   P KC    C  + S  + L+ H R H TD+P+KCN C       + L +H+ K
Sbjct: 2  SSGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

Query: 74 H 74
           
Sbjct: 60 F 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
          R H  D+P+KC +  C     Q SNL  H +    D     
Sbjct: 30 RIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSGPS 68

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 74.2 bits (183), Expect = 1e-17
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 9/71 (12%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
           RTHTG+KPYKC   GC   F++   L  H R H   KP++C  C + F     L     
Sbjct: 37 LRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL----- 91

Query: 73 KHKDSKHLKTH 83
              + H+K H
Sbjct: 92 ----ALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 70.0 bits (172), Expect = 5e-16
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 20  KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHIPKHKDS 77
           + + C +PGC K +++ S+L++H R H  +KPYKC    C   F     L  H  KH   
Sbjct: 14  RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG- 72

Query: 78  KHLKTHICQYCGKSYTQETYLSKHMQKH 105
              K   C  C +S+++  +L+ HM++H
Sbjct: 73  --AKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQ 47
           R HTG KP++C    C ++FS+  +L  H + HQ
Sbjct: 67 YRKHTGAKPFQC--GVCNRSFSRSDHLALHMKRHQ 99

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 72.3 bits (178), Expect = 4e-17
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 8/70 (11%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           +HT   PY+C H GC K FS  S L+ H + H      K +SC       T  L+H   
Sbjct: 24 FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH--- 80

Query: 74 HKDSKHLKTH 83
                 + H
Sbjct: 81 -----VAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 65.7 bits (161), Expect = 1e-14
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 22  YKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHIPKHKDSKH 79
           Y C    C KAF + + L+ H   H    PY+C    C K F   + L  H   H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 80  LKTHICQYCGKSYTQETYLSKHMQK 104
            K   C + GK++T      KH+ +
Sbjct: 62  KKDDSCSFVGKTWTL---YLKHVAE 83

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 71.8 bits (177), Expect = 7e-17
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
          RTHTG+KPY C   GC   F++   L  H R H   +P++C  C + F     L      
Sbjct: 28 RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL------ 81

Query: 74 HKDSKHLKTH 83
             + H+K H
Sbjct: 82 ---ALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 69.5 bits (171), Expect = 5e-16
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 16  HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHIPK 73
            T          GC K +++ S+L++H R H  +KPY C+   C   F     L  H  K
Sbjct: 2   RTATHTCDY--AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
           H      +   CQ C +++++  +L+ HM++H
Sbjct: 60  HTG---HRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH 46
           R HTG +P++C+   C +AFS+  +L  H + H
Sbjct: 57 YRKHTGHRPFQCQK--CDRAFSRSDHLALHMKRH 88

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 71.4 bits (176), Expect = 8e-17
 Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 9/83 (10%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH----QTDKPYKCNSCYKCFVDETALLE 69
          RTHTG+KPY C H  C K F Q   L  H + +         + C+ C K F     +  
Sbjct: 8  RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMAR 65

Query: 70 HIPKHKDSKHLKTHICQYCGKSY 92
          H         ++    +  G S 
Sbjct: 66 HADNCAGPDGVE---GENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 38  NLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKD-SKHLKTHICQYCGKSYTQET 96
           +  S  R H  +KPY C+ C K F  +  L  H  ++ D +      +C  CGK++T+  
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 97  YLSKHMQKH 105
            +++H    
Sbjct: 62  TMARHADNC 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 70.6 bits (174), Expect = 1e-16
 Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
               DKPYKC    C  +F    NL SH   H  +KPY+CN C   F     L  H
Sbjct: 10 HMTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY 52
          +  HTG+KPY+C    C   F++ +NL++H+R H  +KPY
Sbjct: 37 KTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 37  SNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQET 96
            +   HS    +DKPYKC+ C   F  +  L  H   H   K  +   C  CG  + +  
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYR---CNICGAQFNRPA 59

Query: 97  YLSKHMQKH 105
            L  H + H
Sbjct: 60  NLKTHTRIH 68

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 72.2 bits (178), Expect = 1e-16
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 2/86 (2%)

Query: 20  KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKH 79
           +   C H GC K F   S ++ H   H   + + C  C K FV+ + L  H   H   K 
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 80  LKTHICQYCGKSYTQETYLSKHMQKH 105
            +      CGK ++ +  L  H++ H
Sbjct: 63  FQCTFEG-CGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 69.5 bits (171), Expect = 2e-15
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 22/102 (21%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS--CYKCFVDETALLEHI 71
            TH G + + C    C KAF + S L+ H   H  +KP++C    C K F  +  L    
Sbjct: 28  HTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL---- 80

Query: 72  PKHKDSKHLKTH------ICQY--CGKSYTQETYLSKHMQKH 105
                  H++ H      +C +  C K + Q T L  H+  H
Sbjct: 81  -----RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYK 53
           R HTGD+PY C   GC K F+Q +NL+SH   H   K  +
Sbjct: 85  RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 71.9 bits (177), Expect = 3e-16
 Identities = 17/43 (39%), Positives = 26/43 (60%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN 55
           +RTHTG+KP+KC   GC + F+  S+ + H   H +DK    +
Sbjct: 112 KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 70.8 bits (174), Expect = 8e-16
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 29/92 (31%)

Query: 14  RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPK 73
           R HTG+KP+ C  PGC K F++  NL+ H R H  +KP+KC                   
Sbjct: 83  RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEF----------------- 125

Query: 74  HKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
                       + C + +   +   KHM  H
Sbjct: 126 ------------EGCDRRFANSSDRKKHMHVH 145

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.5 bits (171), Expect = 3e-16
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSR--CHQTDKPYKCNSCYKCFVDETALLE 69
          +  T  G+  Y+C+   C + ++ +SN   H      +  K Y C  C+K F  +  +  
Sbjct: 1  MEFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTA 58

Query: 70 HIPKH 74
          H+   
Sbjct: 59 HVKII 63

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 69.0 bits (170), Expect = 6e-16
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
                 + YKC    C K+FS  S+L  H R H  +KPYKC+ C K F+  + L+ H
Sbjct: 10 EWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.9 bits (136), Expect = 4e-11
 Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYK 53
          RRTHTG+KPYKC    C KAF Q S+L  H R H    P  
Sbjct: 38 RRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.4 bits (114), Expect = 8e-08
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 35  QLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQ 94
              +        +  + YKC+ C K F   + L +H   H   K  K   C  CGK++ Q
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYK---CDECGKAFIQ 58

Query: 95  ETYLSKHMQKH 105
            ++L  H + H
Sbjct: 59  RSHLIGHHRVH 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 68.7 bits (169), Expect = 7e-16
 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
             H+G+KPY C    C KAFS+ S L  H R H  +KPYKC  C K F   + L+ H
Sbjct: 6  SGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY 52
          +R HTG+KPYKC    C KAFSQ S L +H R H +    
Sbjct: 34 QRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 39  LQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYL 98
               S  H  +KPY C  C K F   + L++H   H   K  K   C  CGK+++Q + L
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYK---CLECGKAFSQNSGL 58

Query: 99  SKHMQKH 105
             H + H
Sbjct: 59  INHQRIH 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH--QTDKPYKCNSCYKCFVDETALLEH 70
           RTH+G+KPY+C    C   F+Q   ++ H      +    + C  C      ++ L  H
Sbjct: 7  GRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64

Query: 71 I 71
          +
Sbjct: 65 L 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 38  NLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETY 97
           +  S  R H  +KPY+C  C+  F     +  HI +   ++++    C +C     +++ 
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH-TENVAKFHCPHCDTVIARKSD 60

Query: 98  LSKHMQKH 105
           L  H++K 
Sbjct: 61  LGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 8/43 (18%), Positives = 13/43 (30%), Gaps = 5/43 (11%)

Query: 13 RRTHTG--DKPYKCRHPGCVKAFSQLSNLQSHSRCHQT-DKPY 52
                     + C H  C    ++ S+L  H R   +   P 
Sbjct: 35 ILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSGPS 75

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 68.2 bits (168), Expect = 1e-15
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
             H+  +PY C++  C K F Q S+++ H+  H  +KP+KC  C K F   + L+ H  
Sbjct: 21 LLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR 78

Query: 73 KH 74
          KH
Sbjct: 79 KH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 61.7 bits (151), Expect = 3e-13
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 22  YKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLK 81
           + C+   C K+F + S L +H   H   +PY C  C K F  ++ +          KH  
Sbjct: 2   FDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDM---------KKHTF 50

Query: 82  TH------ICQYCGKSYTQETYLSKHMQKH 105
            H       CQ CGK+++Q + L  H +KH
Sbjct: 51  IHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 63.5 bits (155), Expect = 4e-14
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KP+ C  PGC   FS+   L  H R H   KP   +S
Sbjct: 4  GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 1e-13
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            +  G+K YKC    C K FSQ S+LQ+H R H  +KP   +S
Sbjct: 4  GSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPSS 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           +  G+K +KCR   C   FSQ S+L+ H   H  +KP   +S
Sbjct: 5  SSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSS 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S       +K +KC  C  CF   ++L  H
Sbjct: 2  SSGSSGMGEKTWKCRECDMCFSQASSLRLH 31

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRC-HQTDKPYKCNSCYKCF 61
             + +  KPY C+   C K FS+  +L  H +  H +++P+KC       
Sbjct: 3  SGSSGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 8  LTMEIRRTHTGDKPYKCRHPGCVKAFSQ 35
          L   I++ HT ++P+KC+    V   S 
Sbjct: 28 LNGHIKQVHTSERPHKCQV--WVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 15/65 (23%), Positives = 16/65 (24%), Gaps = 24/65 (36%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHI-----------CQYCG 89
          S        KPY C SC K F                 HL  HI           CQ   
Sbjct: 2  SSGSSGSVGKPYICQSCGKGF-------------SRPDHLNGHIKQVHTSERPHKCQVWV 48

Query: 90 KSYTQ 94
             + 
Sbjct: 49 SGPSS 53

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.9 bits (151), Expect = 3e-13
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
                 +PY C    C + FS+   L  H R H   KP++C  C + F    +  +H+ 
Sbjct: 11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF----SRSDHL- 65

Query: 73 KHKDSKHLKTH 83
              + H++TH
Sbjct: 66 ----TTHIRTH 72

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 3e-13
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C K ++   NL  H + H  ++P   +S
Sbjct: 4  GSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSS 45

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 61.6 bits (150), Expect = 3e-13
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEH 70
          +   +  + + C HPGC K + + S+L++H+R H  +KP+ C+   C + F     L  H
Sbjct: 9  QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH 68

Query: 71 IPKH 74
             H
Sbjct: 69 RRTH 72

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 3e-13
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG+KPYKC    C KAF++ S L  H + H  ++    +S
Sbjct: 5  SSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPSS 45

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S       +KPYKC+ C K F  ++ L  H
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 4e-13
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C K+F   S+L  H R H  +KP   +S
Sbjct: 4  GSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSS 45

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S       +KPYKC+ C+K F   ++L  H
Sbjct: 2  SSGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 4e-13
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C KAF   S+L  H   H  +KP   +S
Sbjct: 4  GSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPSS 45

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 4e-13
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C KAF   SNL +H   H  +KP   +S
Sbjct: 4  GSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPSS 45

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.6 bits (148), Expect = 4e-13
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C K F    +L +H   H  +KP   +S
Sbjct: 4  GSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSS 45

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S       +KPYKC  C K F+    L  H
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTH 31

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 5e-13
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KP+KC    C K+F   S L  HS  H  +KP   +S
Sbjct: 4  GSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSS 45

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 5e-13
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN 55
            + +G+KPY C    C K FSQ S L +H R H  +KP   +
Sbjct: 4  GSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 6e-13
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + + +KPYKC    C K +++  NL  H R H  +K    +S
Sbjct: 4  GSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 6e-13
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPY C    C KAF+  SNL  H + H   KP   +S
Sbjct: 4  GSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 6e-13
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+K Y C+   C K+FS+   L  H R H  +KP   +S
Sbjct: 4  GSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 6e-13
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG KPY C    C KAFS  S+L +H   H  +KP   +S
Sbjct: 4  GSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 6e-13
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPY C    C KAF   S LQ H R H  +KP   +S
Sbjct: 4  GSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 6e-13
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C KAFSQ S L  H R H  +KP   +S
Sbjct: 4  GSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 7e-13
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + +G+KP+KC    C K F+Q S L SH R H  +KP   +S
Sbjct: 4  GSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSS 45

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 7e-13
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPY+C    C KAF+Q +NL  H R H  +KP   +S
Sbjct: 4  GSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 7e-13
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG++PY C    C KAF+  SNL  H + H  +KP   +S
Sbjct: 4  GSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 59.9 bits (146), Expect = 7e-13
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN 55
           + TG KP++C H  C K+F    NL +H R H  +K    +
Sbjct: 5  SSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 8e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN 55
            + TG +PY+C    C KAF   S+L  H R H  +KP   +
Sbjct: 4  GSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 9e-13
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            +  G K +KC    C K F+Q S+L  H R H  +KP   +S
Sbjct: 4  GSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS 45

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S        K +KCN C K F   ++L  H
Sbjct: 2  SSGSSGAGKKLFKCNECKKTFTQSSSLTVH 31

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 9e-13
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG+KPYKC    C K+F+  S L+ H +CH  ++    +S
Sbjct: 5  SSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S       +KPYKC+ C K F  ++ L  H
Sbjct: 2  SSGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 59.5 bits (145), Expect = 9e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN 55
            + TG+KPY C+   C K+F   S L  H R H  +KP   +
Sbjct: 4  GSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 1e-12
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            +  G  PYKC    C K+FS    L  H R H  +KP   +S
Sbjct: 4  GSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSS 45

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S         PYKC+ C K F  +  LL H
Sbjct: 2  SSGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + +G+KP+KC+   C KAF Q  +L SH R H  +KP   +S
Sbjct: 5  SSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 1e-12
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG KPY+C    C KAFSQ S L  H R H  +KP   +S
Sbjct: 4  GSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPY C    C K+F Q S+L  H R H  +KP   +S
Sbjct: 4  GSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPY+C    C KAFS  ++L  H R H  +KP   +S
Sbjct: 4  GSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 61.3 bits (148), Expect = 1e-12
 Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 4/96 (4%)

Query: 13  RRTHTGDKPYKCRHPGCVKAFSQLSNLQSH--SRCHQTDKPYKCNSCYKCFVDETALLEH 70
               TG   ++C+   C  A+  L  L  H     H  D  ++ ++       +      
Sbjct: 11  GSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSL 68

Query: 71  IPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHA 106
           +         K   C YCG S+     LS HM K  
Sbjct: 69  LEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C K F+Q S+L  H   H  +KP   +S
Sbjct: 4  GSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + +G+KPYKC    C K F+Q S+L +H R H  +KP   +S
Sbjct: 4  GSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG+KP++C    C KAF+  SNL  H R H  +KP   +S
Sbjct: 5  SSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPSS 45

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 1e-12
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C K F+Q S+L +H R H   KP   +S
Sbjct: 4  GSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPY+C    C KAF+  SNL +H + H  +KP   +S
Sbjct: 4  GSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S       +KPY+C  C K F D + L  H
Sbjct: 2  SSGSSGTGEKPYRCAECGKAFTDRSNLFTH 31

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 1e-12
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG KPYKC    C K F+Q S+L  H   H  +KP   +S
Sbjct: 4  GSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 1e-12
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + +G+KP++C    C K F+Q S+L SH R H  +KP   +S
Sbjct: 4  GSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 1e-12
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPY+C    C KAFS   +L  H R H   KP   +S
Sbjct: 4  GSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + +G+KPYKC    C K + +  +L  H R H  +K    +S
Sbjct: 5  SSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSS 45

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN 55
            + TG+KPY+C+   C KAF+Q ++L  H + H  +KP   +
Sbjct: 4  GSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG KPY C    C K FS  S L  H R H   KP   +S
Sbjct: 5  SSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSS 45

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + +G+KP+KC    C K F   S   SH R H  +KP   +S
Sbjct: 5  SSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSS 45

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S       +KP+KC  C K F   +    H
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSH 31

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 2e-12
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+ P+ C    C K F+  +NL  H + H  ++P   +S
Sbjct: 4  GSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + +G+KPY C +  C KAF   + L  H R H  +KP   +S
Sbjct: 5  SSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C K F   S L  H R H  +KP   +S
Sbjct: 4  GSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C K F+Q S+L  H   H  +KP   +S
Sbjct: 4  GSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC+   C KAF   S+L  H   H  ++P   +S
Sbjct: 4  GSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG+KPY+C    C KAFS  S+L +H   H   KP   +S
Sbjct: 5  SSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KP KC    C KAF   S L  H R H  DK    +S
Sbjct: 4  GSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C KAF   S+   H R H   +P   +S
Sbjct: 4  GSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S       +KPYKC  C K F D ++  +H
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNSSCTQH 31

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KP+KC    C K+++Q  +L  H R H  +KP   +S
Sbjct: 4  GSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG+KPY+C    C K+F++ S L  H + H  +KP   +S
Sbjct: 5  SSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+K YKC    C K FS+ S L  H + H  +KP   +S
Sbjct: 4  GSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 3e-12
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C K F+Q S+L  H R H   KP   +S
Sbjct: 4  GSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.3 bits (142), Expect = 3e-12
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
           + TG+KPY+C    C KAF+  SNL  H R H  +     
Sbjct: 5  SSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 3e-12
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPYKC    C K F + S+L  H   H  +KP   +S
Sbjct: 4  GSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 58.3 bits (142), Expect = 3e-12
 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPY+C+   C KAFSQ ++L  H R H  +KP   +S
Sbjct: 4  GSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 3e-12
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + +G+KPYKC    C KAF + ++L  H R H   +P   +S
Sbjct: 4  GSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSS 45

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 3e-12
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + +G++P+KC    C K F + S+L  H R H  +K    +S
Sbjct: 4  GSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 3e-12
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG+ PY+C    C KAFS+   L SH R H  +KP   +S
Sbjct: 5  SSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 3e-12
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG++ Y+C    C KAF Q S L  H R H+ +KP   +S
Sbjct: 4  GSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 3e-12
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG++P+KC    C K+F Q ++L  H R H  +KP   +S
Sbjct: 4  GSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 4e-12
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + +G KPY+C+   C K F Q+ +L  H R H  ++    +S
Sbjct: 4  GSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 4e-12
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KP+ C    C KAFS    L  H R H  +KP   +S
Sbjct: 4  GSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 57.9 bits (141), Expect = 4e-12
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KP+KC    C K FS+ S L  H + H  +KP   +S
Sbjct: 4  GSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 59.0 bits (143), Expect = 4e-12
 Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 7/79 (8%)

Query: 16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH---QTDKPYKCNSCYKCFVDETALLEHIP 72
           +G    +C    C     Q ++L  H R H        + C  C K F    ++  H  
Sbjct: 2  SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS 59

Query: 73 KHKDSKHLKTHICQYCGKS 91
          K   +  L     +  G S
Sbjct: 60 KSHPALLLAP--QESSGPS 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 7/48 (14%), Positives = 13/48 (27%), Gaps = 5/48 (10%)

Query: 13 RRTHT---GDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC 57
          +R H        + C    C K F +  ++ +H               
Sbjct: 27 QRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQES 72

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 5e-12
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG++ Y+C    C KAF++ S L  H R H  +KP   +S
Sbjct: 4  GSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 6e-12
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KP++CR   C K+FS  S L  H R H  + P   +S
Sbjct: 4  GSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 6e-12
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            +  G+KPY C    C KAFS  S L  H R H  +KP   +S
Sbjct: 4  GSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSS 45

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 57.5 bits (140), Expect = 7e-12
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          + + C    C +AF++  +L+ H R H  +KPY C  C + F     L+ H
Sbjct: 1  RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSR 44
           R+HT +KPY C    C +AF++   L  H++
Sbjct: 22 YRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQ 51

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 7e-12
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG K ++C    C KAF++ S L  H + H  +KP   +S
Sbjct: 4  GSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 9e-12
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            +  G+KPY+C    C K+FS    L  H   H  +KP   +S
Sbjct: 4  GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 56.7 bits (138), Expect = 1e-11
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG+KP++C    C K+FS  S L +H R H  +KP   +S
Sbjct: 5  SSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 1e-11
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG+KP++C+   C   FS   +L  H R H+   P   +S
Sbjct: 5  SSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.8 bits (138), Expect = 1e-11
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            +  G++ ++C    C K F Q SN   H R H  +KP   +S
Sbjct: 4  GSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPSS 45

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.7 bits (138), Expect = 1e-11
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
           + TG KPY C    C KAF   S L  H+R H  +     
Sbjct: 5  SSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSS 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 1e-11
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + TG+KPY+C    C K+F + S L  H R H  + P   +S
Sbjct: 5  SSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 1e-11
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + TG+KPY C    C KAF   ++L  H R H  +     +S
Sbjct: 4  GSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 56.0 bits (136), Expect = 2e-11
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
              +G+ PY+C    C KAF++   L SH R H  +     
Sbjct: 2  SSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSS 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 55.2 bits (134), Expect = 4e-11
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
             +G+KP+ C    C KAFS  S L  H + H  +KP   +S
Sbjct: 3  SGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSS 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 55.2 bits (134), Expect = 4e-11
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY 52
            +  G+KPYKC    C   F Q+++L++H   H    P 
Sbjct: 3  SGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPS 40

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.2 bits (134), Expect = 5e-11
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
           + +G+KPY+C    C KAF   S L  H R H        
Sbjct: 5  SSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 54.9 bits (133), Expect = 5e-11
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRC-HQTDKPYKCNS 56
            + TG KPY+C    C KAF Q ++L  H R  H  +KP   +S
Sbjct: 4  GSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 41 SHSRCHQTDKPYKCNSCYKCFVDETALLEH 70
          S        KPY+C  C K F+  T+L+ H
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 54.4 bits (132), Expect = 7e-11
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY 52
           +  G+KPY C    C   F  L  L+SH R H    P 
Sbjct: 4  GSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPS 40

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 1e-10
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
           + +G++PY C    C K F + S+L  H + H  +K    +S
Sbjct: 5  SSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSS 45

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.0 bits (128), Expect = 3e-10
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY 52
            +  G+KPY+C    C KAFSQ  +L  H R H    P 
Sbjct: 3  SGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPS 40

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 4e-10
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
            + TG+ PY+C    C K FS+   L SH + H        
Sbjct: 4  GSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.2 bits (126), Expect = 5e-10
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + +  K ++C    C + F+  S+L  H R H  +KP   +S
Sbjct: 4  GSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSS 45

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 4e-09
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS 56
            + +G+K + C    C K F  +S L+ H R H  +K    +S
Sbjct: 4  GSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSS 45

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 49.1 bits (118), Expect = 8e-09
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY 52
             +G + Y+C+   C K+F Q  +L  H R H    P 
Sbjct: 3  SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPS 39

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 47.7 bits (113), Expect = 5e-08
 Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 10/77 (12%)

Query: 37  SNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQET 96
            +     + H  D+  KC+ C   F+  + L             KT +C+ C K   QE 
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR----------KTPMCEKCRKDSCQEA 53

Query: 97  YLSKHMQKHAERSDKRP 113
            L+K     + +    P
Sbjct: 54  ALNKDEGNESGKKTSGP 70

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 47.3 bits (112), Expect = 8e-08
 Identities = 17/66 (25%), Positives = 22/66 (33%), Gaps = 9/66 (13%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP 72
          ++ H GD+  KC    C   F + S L          K   C  C K    E AL +   
Sbjct: 10 QKIHLGDRSQKCSK--CGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKDEG 60

Query: 73 KHKDSK 78
               K
Sbjct: 61 NESGKK 66

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 46.5 bits (111), Expect = 6e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYK 53
            +  G+ PY C    C K+F+Q  +L  H R      P  
Sbjct: 3  SGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSS 41

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.9 bits (107), Expect = 2e-07
 Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
           + T  K Y C    C KAF+++ +L  H + H        
Sbjct: 5  SSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.6 bits (106), Expect = 4e-07
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
             +G+KPY C    C + FS  + L  H + H        
Sbjct: 3  SGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSS 41

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 43.6 bits (102), Expect = 1e-06
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 22 YKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
          Y C    C     + S L+ H R H   +PY C  C   F  +  L +H+     SK
Sbjct: 2  YICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.5 bits (89), Expect = 7e-05
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK 50
          RTHT  +PY C +  C  +F    NL  H +     K
Sbjct: 22 RTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 35.8 bits (82), Expect = 8e-04
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 52  YKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHA 106
           Y C  C       + L +HI  H D +      C YC  S+  +  L+KHM+  A
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYH---CTYCNFSFKTKGNLTKHMKSKA 53

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.8 bits (102), Expect = 4e-06
 Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 7/94 (7%)

Query: 14  RTHTGDKPYKC--RHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHI 71
            T    +  +   +           S+        +    + C  C   F    +L +HI
Sbjct: 35  LTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHI 94

Query: 72  PKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
              + +K     +C  C K +T       H+ K 
Sbjct: 95  RYTEHTK-----VCPVCKKEFTSTDSALDHVCKK 123

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 42.3 bits (99), Expect = 8e-06
 Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 6/55 (10%)

Query: 6  QELTMEIRRTHTG---DKPYKCRHPGCV---KAFSQLSNLQSHSRCHQTDKPYKC 54
           EL   +   H G      + C    C    K+F     L +H R H  +K    
Sbjct: 39 HELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.0 bits (93), Expect = 5e-05
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 6/66 (9%)

Query: 46  HQTDKPYKCNSCYKCFVDETALLEHIPK-HKDSKHLKTHICQY-----CGKSYTQETYLS 99
            +        SC + F     L+ H+   H        H+C +      GKS+  +  L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 100 KHMQKH 105
            H++ H
Sbjct: 80  NHIRVH 85

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          R  TG KP++C    C ++FS+  +L  H + H
Sbjct: 4  RGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.5 bits (92), Expect = 3e-05
 Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 2/44 (4%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC 57
           +    K   C    C K F  + +L  H   H  +KPY     
Sbjct: 5  SSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.1 bits (91), Expect = 4e-05
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKP 51
          +  G+ P+KC    C + F+Q + L  H R H     
Sbjct: 6  SGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSG 40

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK 50
          K + C   GC K + + S+L++H R H  ++
Sbjct: 7  KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 38.3 bits (89), Expect = 7e-05
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK 50
          DK ++C  PGC K F +  N++SH + H  D+
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK 50
          +P+ C    C K F++   LQ H R H  +K
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 32

 Score = 35.4 bits (81), Expect = 5e-04
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQ 47
          D+PY C HPGC KAF +  +L  H + HQ
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 36.8 bits (84), Expect = 8e-04
 Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 8/84 (9%)

Query: 18  GDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS 77
             + Y+CR   C    S L    SH R  +      C  C   F       EH  K +  
Sbjct: 13  NKEVYQCRL--CNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESKCEYK 68

Query: 78  KHLKTHICQYCGKSYTQETYLSKH 101
           K      C  C +++     + +H
Sbjct: 69  KLT----CLECMRTFKSSFSIWRH 88

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	223
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.88
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.87
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.87
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.87
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.87
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.87
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.86
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.85
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.84
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.83
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.83
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.82
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.81
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.78
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.77
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.77
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.76
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.72
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.72
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.69
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.69
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.69
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.67
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.67
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.66
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.66
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.65
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.65
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.65
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.64
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.63
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.62
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.62
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.62
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.61
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.6
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.6
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.59
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.59
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.58
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.57
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.56
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.56
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.55
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.55
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.54
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.54
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.54
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.53
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.52
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.52
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.51
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.49
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.48
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.46
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.45
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.45
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.45
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.44
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.44
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.4
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.39
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.38
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.37
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.37
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.36
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.34
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.34
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.33
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.31
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.29
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.27
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.27
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.26
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.26
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.26
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.26
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.26
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.25
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.25
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.24
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.24
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.24
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.24
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.23
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.23
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.23
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.22
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.21
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.21
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.2
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.18
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.17
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.17
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.16
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.14
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.13
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.09
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.99
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.99
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.97
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.97
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.95
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.94
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.94
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.92
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.89
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.84
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.78
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.78
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.76
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.75
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.75
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.7
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.64
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.63
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.61
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.57
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.55
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.54
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.4
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.4
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.39
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.39
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.39
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.35
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.35
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.33
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.33
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.32
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.32
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.32
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.3
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.28
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.28
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.27
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.27
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.27
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.27
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.27
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.27
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.27
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.26
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.26
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.26
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.25
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.23
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.22
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.21
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.52
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.5
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.5
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.18
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.46
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.43
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.12
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.08
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.06
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.05
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.28
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.92
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.91
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.05
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.67
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.36
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.25
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.89
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.62
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.05
4i1l_A	93	Scurfin, forkhead box protein P3; FOXP3, dimerizat	90.24
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	89.69
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	88.33
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	87.83
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.99
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.79
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	85.31
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.31
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	85.23
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	85.18
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	84.47
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	84.47
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	83.2
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	82.68
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	82.54

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=4.3e-26  Score=164.58  Aligned_cols=105  Identities=23%  Similarity=0.386  Sum_probs=95.3

Q ss_pred             HHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183           9 TMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus         9 ~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      +.+|+++|.|+++|.|++  |++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|.++   ++|.|.+|
T Consensus        10 ~~h~~~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~C   84 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGE---RRYQCLAC   84 (133)
T ss_dssp             SSEEEEEETTEEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTC---CCEEESSS
T ss_pred             HhhceeecCCCcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCC---ccccCCCC
Confidence            345677899999999988  9999999999999999999999999999999999999999999999998   99999999


Q ss_pred             CCccCChHHHHHHHhhhcccCC------CCCCcCCC
Q psy8183          89 GKSYTQETYLSKHMQKHAERSD------KRPPIIGI  118 (223)
Q Consensus        89 ~~~f~~~~~l~~H~~~h~~~~~------~~~~~c~~  118 (223)
                      ++.|.+...|..|+++|+++.+      +.|..|+.
T Consensus        85 ~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k  120 (133)
T 2lt7_A           85 GKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRS  120 (133)
T ss_dssp             CCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCS
T ss_pred             CCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCc
Confidence            9999999999999999987654      44555554

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.91  E-value=1.1e-24  Score=166.35  Aligned_cols=116  Identities=36%  Similarity=0.649  Sum_probs=90.9

Q ss_pred             CCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCC
Q psy8183           2 DLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLK   81 (223)
Q Consensus         2 ~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k   81 (223)
                      .|..+..|..|+++|.++++|.|+.  |++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++.|.++   +
T Consensus        58 ~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~  132 (190)
T 2i13_A           58 SFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE---K  132 (190)
T ss_dssp             EESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCC---C
T ss_pred             hhCCHHHHHHHHHhcCCCCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCC---C
Confidence            4667777777777777777777766  7777777777777777777777788888888888888888888877777   7


Q ss_pred             cccCCccCCccCChHHHHHHHhhhcccCCCCCCcCCCCCcc
Q psy8183          82 THICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAA  122 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~c~~~~~~  122 (223)
                      +|.|.+|++.|.+...|..|+++|+++.+|.|..|+..+..
T Consensus       133 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~  173 (190)
T 2i13_A          133 PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSR  173 (190)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESS
T ss_pred             CeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCC
Confidence            78888888888888888888888888888888888776553

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=7.7e-24  Score=149.38  Aligned_cols=101  Identities=30%  Similarity=0.597  Sum_probs=61.2

Q ss_pred             CCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCC
Q psy8183           2 DLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLK   81 (223)
Q Consensus         2 ~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k   81 (223)
                      .|..+..|..|+++|.++++|.|+++.|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.|.++   +
T Consensus        17 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~   93 (119)
T 2jp9_A           17 RYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE---K   93 (119)
T ss_dssp             CBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTC---C
T ss_pred             hhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCC---C
Confidence            4555666666666666666666652236666666666666666666666666666666666666666666666655   5


Q ss_pred             cccC--CccCCccCChHHHHHHHhhh
Q psy8183          82 THIC--QYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        82 ~~~C--~~C~~~f~~~~~l~~H~~~h  105 (223)
                      +|.|  .+|++.|.+...|..|+++|
T Consensus        94 ~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           94 PFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CeeCCCCCCccccCCHHHHHHHHhcC
Confidence            5666  55666666666666666543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.90  E-value=5.2e-24  Score=162.55  Aligned_cols=118  Identities=36%  Similarity=0.626  Sum_probs=107.7

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHL   80 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   80 (223)
                      +.|..+..|..|+++|.++++|.|+.  |++.|.....|..|+++|.++++|.|+.|++.|.....|..|++.|.++   
T Consensus        29 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---  103 (190)
T 2i13_A           29 KSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE---  103 (190)
T ss_dssp             --CCSSHHHHHGGGCC---CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTC---
T ss_pred             cccCCHHHHHHHHHHcCCCCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCC---
Confidence            36889999999999999999999988  9999999999999999999999999999999999999999999999998   


Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcccCCCCCCcCCCCCccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPIIGIPRAAL  123 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~c~~~~~~~  123 (223)
                      ++|.|.+|++.|.+...|..|+++|+++.++.|..|+..+...
T Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  146 (190)
T 2i13_A          104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRE  146 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCH
Confidence            8999999999999999999999999999999999999876543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=5.6e-23  Score=146.11  Aligned_cols=104  Identities=29%  Similarity=0.527  Sum_probs=85.7

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc--CcccccCchhHHhhhhhhcCCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS--CYKCFVDETALLEHIPKHKDSK   78 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   78 (223)
                      +.|..+..|..|+++| ++++|.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|.+...|..|++.|.++ 
T Consensus        15 ~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~-   90 (124)
T 1ubd_C           15 KMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD-   90 (124)
T ss_dssp             CEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCC-
T ss_pred             CccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCC-
Confidence            3578888888888888 788888877  8888888888888888888888888875  888888888888888888887 


Q ss_pred             CCCcccCC--ccCCccCChHHHHHHHhhhcccCC
Q psy8183          79 HLKTHICQ--YCGKSYTQETYLSKHMQKHAERSD  110 (223)
Q Consensus        79 ~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  110 (223)
                        ++|.|.  .|++.|.+...|..|+++|+++++
T Consensus        91 --~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           91 --RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             --CCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             --CceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence              888885  488888888888888888887654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.6e-22  Score=143.44  Aligned_cols=102  Identities=25%  Similarity=0.534  Sum_probs=86.4

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHH---hCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRC---HQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~---h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      +.|..+..|..|+++|.++++|.|+.  |++.|.+...|..|++.   +.++++|.|++|++.|.+...|..|++.|.++
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (124)
T 2dlq_A           15 KKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE   92 (124)
T ss_dssp             CCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             CcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCC
Confidence            46888888888888888888899977  99999888889888885   46778888999999998888888998888887


Q ss_pred             CCCCcccCCccCCccCChHHHHHHHhh-hcc
Q psy8183          78 KHLKTHICQYCGKSYTQETYLSKHMQK-HAE  107 (223)
Q Consensus        78 ~~~k~~~C~~C~~~f~~~~~l~~H~~~-h~~  107 (223)
                         ++|.|.+|++.|.+...|..|++. |.+
T Consensus        93 ---~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           93 ---MPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             ---CSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             ---CCccCCCccchhCCHHHHHHHHHHHCCC
Confidence               888898899999988889888875 443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=7.3e-23  Score=144.33  Aligned_cols=104  Identities=30%  Similarity=0.602  Sum_probs=97.7

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC--cCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccC
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYT   93 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~   93 (223)
                      ++++++|.|.+++|++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|++.|.++   ++|.|.+|++.|.
T Consensus         1 a~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~   77 (119)
T 2jp9_A            1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV---KPFQCKTCQRKFS   77 (119)
T ss_dssp             CCSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCC---CCEECTTTCCEES
T ss_pred             CCCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCC---CCccCCccCchhC
Confidence            3688999998778999999999999999999999999999  7999999999999999999998   8999999999999


Q ss_pred             ChHHHHHHHhhhcccCCCCC--CcCCCCCcc
Q psy8183          94 QETYLSKHMQKHAERSDKRP--PIIGIPRAA  122 (223)
Q Consensus        94 ~~~~l~~H~~~h~~~~~~~~--~~c~~~~~~  122 (223)
                      +...|..|+++|+++.++.|  +.|+..+..
T Consensus        78 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  108 (119)
T 2jp9_A           78 RSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR  108 (119)
T ss_dssp             CHHHHHHHHHHHHTCCCEECCSTTCCCEESS
T ss_pred             CHHHHHHHHHHhcCCCCeeCCCCCCccccCC
Confidence            99999999999999999999  789987654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=1.2e-22  Score=149.92  Aligned_cols=109  Identities=23%  Similarity=0.425  Sum_probs=100.9

Q ss_pred             CCCccHHHHHHHHHh-CCCCCC--------eecccCccccccCChHHHHHHHHHhCCCCCccCCc--CcccccCchhHHh
Q psy8183           1 MDLAGQELTMEIRRT-HTGDKP--------YKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS--CYKCFVDETALLE   69 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~-H~~~k~--------~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~   69 (223)
                      +.|..+..|..|+++ |.++++        |.|..  |++.|.....|..|+++|.++++|.|.+  |++.|.+...|.+
T Consensus        33 ~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~  110 (155)
T 2rpc_A           33 RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKI  110 (155)
T ss_dssp             CCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHH
T ss_pred             cccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHH
Confidence            468999999999997 887765        88988  9999999999999999999999999998  9999999999999


Q ss_pred             hhhhhcCCCCCCcccCCc--cCCccCChHHHHHHHhhhcccCCCCCC
Q psy8183          70 HIPKHKDSKHLKTHICQY--CGKSYTQETYLSKHMQKHAERSDKRPP  114 (223)
Q Consensus        70 H~~~h~~~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~  114 (223)
                      |++.|.++   ++|.|.+  |++.|.+...|..|+++|+++++|.|.
T Consensus       111 H~~~h~~~---~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          111 HKRTHTGE---KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHTTTCSS---CSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHhhCCC---CCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            99999998   8999997  999999999999999999999988874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.88  E-value=1.3e-22  Score=154.71  Aligned_cols=120  Identities=24%  Similarity=0.464  Sum_probs=99.3

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC--cCcccccCchhHHhhh-hhhc-C
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHI-PKHK-D   76 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~-~~h~-~   76 (223)
                      +.|..+..|..|+++|.++++|.|.++.|++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|+ +.|. +
T Consensus        22 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~  101 (190)
T 1tf6_A           22 AAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK  101 (190)
T ss_dssp             CBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTT
T ss_pred             chhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3588888889999999888999993223999999999999999888888889998  7999999999999998 4552 3


Q ss_pred             CCCCCcccC--CccCCccCChHHHHHHHhhhcccCCCCCCc--CCCCCccc
Q psy8183          77 SKHLKTHIC--QYCGKSYTQETYLSKHMQKHAERSDKRPPI--IGIPRAAL  123 (223)
Q Consensus        77 ~~~~k~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~--c~~~~~~~  123 (223)
                      .   ++|.|  .+|++.|.+...|..|+++|+++.+|.|..  |+..+...
T Consensus       102 ~---~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~  149 (190)
T 1tf6_A          102 I---CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP  149 (190)
T ss_dssp             T---SCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSH
T ss_pred             c---ceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCH
Confidence            4   78889  889999999999999999888888888877  88876643

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=1.5e-22  Score=149.28  Aligned_cols=119  Identities=24%  Similarity=0.440  Sum_probs=109.2

Q ss_pred             CCCccHHHHHHHHH---hCCCCCCeecccCcc---ccccCChHHHHHHHHHhCCCCCccCCc--CcccccCchhHHhhhh
Q psy8183           1 MDLAGQELTMEIRR---THTGDKPYKCRHPGC---VKAFSQLSNLQSHSRCHQTDKPYKCNS--CYKCFVDETALLEHIP   72 (223)
Q Consensus         1 ~~f~~~~~~~~h~~---~H~~~k~~~C~~p~C---~k~f~~~~~L~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~   72 (223)
                      +.|.++..|..|++   +|.++++|.|++.+|   ++.|.+...|..|+++|.++++|.|++  |++.|.+...|..|++
T Consensus        11 ~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   90 (155)
T 2gli_A           11 QEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR   90 (155)
T ss_dssp             CBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHH
Confidence            46999999999998   799999999986444   499999999999999999999999986  9999999999999999


Q ss_pred             hhcCCCCCCcccCCc--cCCccCChHHHHHHH-hhhcccCCCCCCc--CCCCCcc
Q psy8183          73 KHKDSKHLKTHICQY--CGKSYTQETYLSKHM-QKHAERSDKRPPI--IGIPRAA  122 (223)
Q Consensus        73 ~h~~~~~~k~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~~~--c~~~~~~  122 (223)
                      .|.++   ++|.|.+  |++.|.+...|..|+ ++|.++.+|.|..  |+..+..
T Consensus        91 ~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~  142 (155)
T 2gli_A           91 SHTGE---KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTD  142 (155)
T ss_dssp             HTTTC---CCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESS
T ss_pred             HcCCC---CCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCC
Confidence            99988   8999998  999999999999998 7899999999988  9887653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=1.7e-22  Score=148.98  Aligned_cols=104  Identities=36%  Similarity=0.697  Sum_probs=98.0

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc--CcccccCchhHHhhh-hhhcCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS--CYKCFVDETALLEHI-PKHKDS   77 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~-~~h~~~   77 (223)
                      +.|..+..|..|+++|.++++|.|.+++|++.|.+...|..|+++|.++++|.|++  |++.|.+...|..|+ +.|.++
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~  126 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE  126 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            35899999999999999999999975569999999999999999999999999998  999999999999999 789888


Q ss_pred             CCCCcccCCc--cCCccCChHHHHHHHhhhcc
Q psy8183          78 KHLKTHICQY--CGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        78 ~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~  107 (223)
                         ++|.|.+  |++.|.+...|..|+++|++
T Consensus       127 ---~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          127 ---KPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             ---CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ---CCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence               8999998  99999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.87  E-value=5.1e-22  Score=151.43  Aligned_cols=116  Identities=24%  Similarity=0.388  Sum_probs=105.4

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHH-HHh-CCCCCccC--CcCcccccCchhHHhhhhhhcC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHS-RCH-QTDKPYKC--NSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~-~~h-~~~k~~~C--~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      +.|..+..|..|+++|.++++|.|+.+.|++.|.+...|..|+ +.| .++++|.|  +.|++.|.+...|..|++.|.+
T Consensus        52 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  131 (190)
T 1tf6_A           52 KGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ  131 (190)
T ss_dssp             CCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred             hhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC
Confidence            4699999999999999999999998334999999999999999 566 46789999  8999999999999999999999


Q ss_pred             CCCCCcccCCc--cCCccCChHHHHHHHhhhcccCCCCCCc---CCCCCcc
Q psy8183          77 SKHLKTHICQY--CGKSYTQETYLSKHMQKHAERSDKRPPI---IGIPRAA  122 (223)
Q Consensus        77 ~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~---c~~~~~~  122 (223)
                      +   ++|.|.+  |++.|.+...|..|+++|++   +.|..   |+..+..
T Consensus       132 ~---~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~  176 (190)
T 1tf6_A          132 Q---LPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKT  176 (190)
T ss_dssp             S---CSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSC
T ss_pred             C---CCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCcccc
Confidence            8   9999988  99999999999999999987   88888   7776653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.87  E-value=1.9e-22  Score=135.30  Aligned_cols=89  Identities=29%  Similarity=0.672  Sum_probs=81.7

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHH
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETY   97 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~   97 (223)
                      |+++|.|.++.|++.|.....|..|+++|.++++|.|..|++.|.+...|..|++.|.++   ++|.|.+|++.|.+...
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~   77 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE---KPFACDICGRKFARSDE   77 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCC---CCEECTTTCCEESSHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCC---CCccCCCCCchhCCHHH
Confidence            578999974469999999999999999999999999999999999999999999999998   89999999999999999


Q ss_pred             HHHHHhhhcccC
Q psy8183          98 LSKHMQKHAERS  109 (223)
Q Consensus        98 l~~H~~~h~~~~  109 (223)
                      |..|+++|++++
T Consensus        78 l~~H~~~H~~~k   89 (90)
T 1a1h_A           78 RKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHGGGGC--
T ss_pred             HHHHHHHhcccC
Confidence            999999998764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=3.1e-23  Score=145.62  Aligned_cols=102  Identities=26%  Similarity=0.379  Sum_probs=91.4

Q ss_pred             HHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHH--hCCCCCcc-CCcCcccc--cCchhHHhhhhhhcCCCCCC
Q psy8183           7 ELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRC--HQTDKPYK-CNSCYKCF--VDETALLEHIPKHKDSKHLK   81 (223)
Q Consensus         7 ~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~--h~~~k~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~k   81 (223)
                      ..|..|+++|+++++|.|+.  |++.|.+...|..|+++  |.+.+++. |+.|++.|  .....|..|++.|.++   +
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~---~   79 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ---K   79 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCC---S
T ss_pred             hhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCC---c
Confidence            34678999999999999988  99999999999999999  77777654 99999999  8999999999999998   9


Q ss_pred             cccCCccCCccCChHHHHHHHhhhcccCCCCC
Q psy8183          82 THICQYCGKSYTQETYLSKHMQKHAERSDKRP  113 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  113 (223)
                      +|.|.+|++.|.+...|..|+++|+.......
T Consensus        80 ~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           80 VLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             ceECCCCCCccCCHHHHHHHHHHhCCcccCCC
Confidence            99999999999999999999999886654433

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.86  E-value=1.5e-21  Score=134.95  Aligned_cols=93  Identities=31%  Similarity=0.616  Sum_probs=87.4

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCCh
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQE   95 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~   95 (223)
                      ..++++|.|.+  |++.|.....|..|+++|.++++|.|++|++.|.....|..|++.|.++   ++|.|.+|++.|.+.
T Consensus        12 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~   86 (106)
T 2ee8_A           12 SKTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKE---KPFKCQECGKGFCQS   86 (106)
T ss_dssp             CCCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCC---CTTSCSSSCCCCSSH
T ss_pred             cCCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCC---CCeECCCcCCcccCH
Confidence            35678999988  9999999999999999999999999999999999999999999999998   899999999999999


Q ss_pred             HHHHHHHhhhcccCCCCC
Q psy8183          96 TYLSKHMQKHAERSDKRP  113 (223)
Q Consensus        96 ~~l~~H~~~h~~~~~~~~  113 (223)
                      ..|..|+++|.++.++.+
T Consensus        87 ~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           87 RTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHHHhCCCCCCcC
Confidence            999999999998877653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=7.5e-22  Score=140.01  Aligned_cols=106  Identities=24%  Similarity=0.472  Sum_probs=95.5

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCCh
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQE   95 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~   95 (223)
                      .+++++|.|+.  |++.|.....|..|+++|.++++|.|+.|++.|.+...|..|+..++.....++|.|.+|++.|.+.
T Consensus         2 s~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~   79 (124)
T 2dlq_A            2 SSGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR   79 (124)
T ss_dssp             CCCCSSCCCTT--TCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSH
T ss_pred             CCCCCCCCCCC--CCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCH
Confidence            36889999988  9999999999999999999999999999999999999999999965322222899999999999999


Q ss_pred             HHHHHHHhhhcccCCCCCCcCCCCCccc
Q psy8183          96 TYLSKHMQKHAERSDKRPPIIGIPRAAL  123 (223)
Q Consensus        96 ~~l~~H~~~h~~~~~~~~~~c~~~~~~~  123 (223)
                      ..|..|+++|+++.+|.|..|+..+...
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~  107 (124)
T 2dlq_A           80 MELRLHMVSHTGEMPYKCSSCSQQFMQK  107 (124)
T ss_dssp             HHHHHHHHHHSSSCSEECSSSCCEESSH
T ss_pred             HHHHHHHHHcCCCCCccCCCccchhCCH
Confidence            9999999999999999999999876643

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=9e-22  Score=133.59  Aligned_cols=91  Identities=33%  Similarity=0.662  Sum_probs=86.0

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQ   94 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~   94 (223)
                      .+.++++|.|..  |++.|.+...|..|+++|.++++|.|++|++.|.....|..|++.|.++   ++|.|.+|++.|.+
T Consensus         2 s~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~   76 (96)
T 2dmd_A            2 SSGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE---RPFKCQICPYASRN   76 (96)
T ss_dssp             CCCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCC---CCEECSSSSCEESS
T ss_pred             CCCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCC---CCccCCCCCCccCC
Confidence            357899999988  9999999999999999999999999999999999999999999999988   89999999999999


Q ss_pred             hHHHHHHHhhhcccCC
Q psy8183          95 ETYLSKHMQKHAERSD  110 (223)
Q Consensus        95 ~~~l~~H~~~h~~~~~  110 (223)
                      ...|..|+++|+++..
T Consensus        77 ~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           77 SSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             HHHHHHHHTTCCSCCC
T ss_pred             HHHHHHHHHHhcCCCC
Confidence            9999999999987654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=5.6e-22  Score=142.93  Aligned_cols=93  Identities=20%  Similarity=0.318  Sum_probs=86.1

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCC-
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKH-   79 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-   79 (223)
                      +.|..+..|..|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|++.|.+...|..|++.|+++++ 
T Consensus        30 k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           30 RSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             CEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTT
T ss_pred             CCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCC
Confidence            46999999999999999999999988  999999999999999999999999999999999999999999999987643 


Q ss_pred             --CCcccCCccCCccCCh
Q psy8183          80 --LKTHICQYCGKSYTQE   95 (223)
Q Consensus        80 --~k~~~C~~C~~~f~~~   95 (223)
                        .++|.|.+|++.|...
T Consensus       108 ~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A          108 GDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             SSSCCEEECCCCSSCCCC
T ss_pred             CCCCCeecCCCCchhhhc
Confidence              2679999999988754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=5e-21  Score=135.96  Aligned_cols=103  Identities=26%  Similarity=0.476  Sum_probs=92.4

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCc--cCCccCCh
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQY--CGKSYTQE   95 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~--C~~~f~~~   95 (223)
                      ++++|.|+++.|++.|.+...|..|+++| ++++|.|+.|++.|.....|..|++.|.++   ++|.|.+  |++.|.+.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~   77 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE---KPFQCTFEGCGKRFSLD   77 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCC---CCEECCSTTCCCEESCH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCC---CCeeCCCCCCcCccCCH
Confidence            46889998445999999999999999999 889999999999999999999999999998   8999986  99999999


Q ss_pred             HHHHHHHhhhcccCCCCCC--cCCCCCcccC
Q psy8183          96 TYLSKHMQKHAERSDKRPP--IIGIPRAALE  124 (223)
Q Consensus        96 ~~l~~H~~~h~~~~~~~~~--~c~~~~~~~~  124 (223)
                      ..|..|+++|.++.+|.|+  .|+..+....
T Consensus        78 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~  108 (124)
T 1ubd_C           78 FNLRTHVRIHTGDRPYVCPFDGCNKKFAQST  108 (124)
T ss_dssp             HHHHHHHHHHHCCCCCCCCSTTCCCCCSSTT
T ss_pred             HHHHHHHHHhCCCCceECCCCCCCCccCCHH
Confidence            9999999999999999996  4998876544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=7.2e-22  Score=136.95  Aligned_cols=95  Identities=20%  Similarity=0.315  Sum_probs=87.4

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCc
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKS   91 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~   91 (223)
                      ++++|+++++|.|++  |++.|.....|..|+++|  .++|.|.+|++.|.....|..|++ |.++   ++|.|.+|++.
T Consensus         7 ~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~---~~~~C~~C~~~   78 (107)
T 1wjp_A            7 GASPVENKEVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEY---KKLTCLECMRT   78 (107)
T ss_dssp             CCCCCCCCCCCBCTT--TCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCST---GGGEEGGGTEE
T ss_pred             cCcccCCCcCeECCC--CCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCC---CCccCccccch
Confidence            456899999999988  999999999999999998  478999999999999999999996 8888   99999999999


Q ss_pred             cCChHHHHHHHh-hhcccCCCCCC
Q psy8183          92 YTQETYLSKHMQ-KHAERSDKRPP  114 (223)
Q Consensus        92 f~~~~~l~~H~~-~h~~~~~~~~~  114 (223)
                      |.+...|..|++ +|.++.++.+.
T Consensus        79 f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             CSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             hCCHHHHHHHHHHHcCCCCCCCCC
Confidence            999999999997 88888777664

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=3.1e-21  Score=134.30  Aligned_cols=88  Identities=28%  Similarity=0.560  Sum_probs=84.6

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQ   94 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~   94 (223)
                      +|+++++|.| .  |++.|.+...|..|++.|.++++|.|.+|++.|.....|.+|++.|.++   ++|.|.+|++.|.+
T Consensus         4 ~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~   77 (110)
T 2csh_A            4 GSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI---KPYECNICAKRFMW   77 (110)
T ss_dssp             CCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCC---CCEECSSSCCEESC
T ss_pred             CCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCC---CCeeCCCCcchhcC
Confidence            6899999999 8  9999999999999999999999999999999999999999999999998   89999999999999


Q ss_pred             hHHHHHHHhhhccc
Q psy8183          95 ETYLSKHMQKHAER  108 (223)
Q Consensus        95 ~~~l~~H~~~h~~~  108 (223)
                      ...|..|++.|+..
T Consensus        78 ~~~l~~H~~~~~~~   91 (110)
T 2csh_A           78 RDSFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccc
Confidence            99999999998753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.83  E-value=6.7e-21  Score=125.33  Aligned_cols=82  Identities=34%  Similarity=0.709  Sum_probs=78.5

Q ss_pred             CeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHH
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSK  100 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~  100 (223)
                      +|.|..  |++.|.....|..|+++|.++++|.|+.|++.|.....|..|++.|.++   ++|.|.+|++.|.+...|..
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~   75 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE---KPHKCQVCGKAFSQSSNLIT   75 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTC---CCEECTTTSCEESSHHHHHH
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCC---CCCcCCCcchhhCChHHHHH
Confidence            689988  9999999999999999999999999999999999999999999999998   89999999999999999999


Q ss_pred             HHhhhcc
Q psy8183         101 HMQKHAE  107 (223)
Q Consensus       101 H~~~h~~  107 (223)
                      |+++|++
T Consensus        76 H~~~H~g   82 (82)
T 2kmk_A           76 HSRKHTG   82 (82)
T ss_dssp             HHHHHC-
T ss_pred             HHHhhCC
Confidence            9999864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=2.3e-20  Score=126.33  Aligned_cols=90  Identities=30%  Similarity=0.600  Sum_probs=82.3

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCCh
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQE   95 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~   95 (223)
                      .+++++|.|.+  |++.|.....|..|+++|.++++|.|++|++.|.....|..|++.|+++.. ++|.|.+|++.|.+.
T Consensus         2 s~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~~~C~~C~~~f~~~   78 (95)
T 2yt9_A            2 SSGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG-KPYICQSCGKGFSRP   78 (95)
T ss_dssp             CCCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCC-SSBCCSSSCCCBSSH
T ss_pred             CCCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCC-CceECCCccchhCCH
Confidence            36889999988  999999999999999999999999999999999999999999999987522 789999999999999


Q ss_pred             HHHHHHHh-hhccc
Q psy8183          96 TYLSKHMQ-KHAER  108 (223)
Q Consensus        96 ~~l~~H~~-~h~~~  108 (223)
                      ..|..|++ +|.++
T Consensus        79 ~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           79 DHLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHHHTSCCC
T ss_pred             HHHHHHHHHhcCCC
Confidence            99999996 57653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.82  E-value=3.2e-20  Score=126.73  Aligned_cols=87  Identities=33%  Similarity=0.705  Sum_probs=82.1

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC--cCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCCh
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQE   95 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~   95 (223)
                      .+++|.|.+++|++.|.....|..|+++|.++++|.|.  .|++.|.....|.+|++.|.++   ++|.|.+|++.|.+.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~   88 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA---KPFQCGVCNRSFSRS   88 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSC---CSCBCSSSCCBCSSH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCC---CCeECCCCcCccCCH
Confidence            46789999778999999999999999999999999996  6999999999999999999998   899999999999999


Q ss_pred             HHHHHHHhhhcc
Q psy8183          96 TYLSKHMQKHAE  107 (223)
Q Consensus        96 ~~l~~H~~~h~~  107 (223)
                      ..|..|+++|.+
T Consensus        89 ~~l~~H~~~H~~  100 (100)
T 2ebt_A           89 DHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHHhCC
Confidence            999999999863

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.81  E-value=5.8e-20  Score=122.75  Aligned_cols=86  Identities=30%  Similarity=0.659  Sum_probs=80.8

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC--cCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCCh
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN--SCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQE   95 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~   95 (223)
                      +.++|.|++++|++.|.....|..|+++|.++++|.|+  .|++.|.....|..|++.|.++   ++|.|.+|++.|...
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~   78 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH---RPFQCQKCDRAFSRS   78 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCC---CCEECSSSSCEESSH
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCC---CCccCCCCCcccCCH
Confidence            45789998888999999999999999999999999997  5999999999999999999998   899999999999999


Q ss_pred             HHHHHHHhhhc
Q psy8183          96 TYLSKHMQKHA  106 (223)
Q Consensus        96 ~~l~~H~~~h~  106 (223)
                      ..|..|+++|.
T Consensus        79 ~~l~~H~~~H~   89 (89)
T 2wbs_A           79 DHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHGGGGC
T ss_pred             HHHHHHHHhhC
Confidence            99999999873

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.78  E-value=4.6e-19  Score=130.58  Aligned_cols=104  Identities=21%  Similarity=0.346  Sum_probs=94.4

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHH-hCCCCC--------ccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRC-HQTDKP--------YKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~-h~~~k~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      +.+++.|.|..  |++.|.+...|..|+++ |.++++        |.|..|++.|.....|..|++.|.++   ++|.|.
T Consensus        20 ~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~   94 (155)
T 2rpc_A           20 DEAQLSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE---KPFPCP   94 (155)
T ss_dssp             CTTCCSSSCCC--CCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCC---CSEECS
T ss_pred             chhhccccccc--CCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCC---CcccCC
Confidence            45678899988  99999999999999997 766654        89999999999999999999999998   999999


Q ss_pred             c--cCCccCChHHHHHHHhhhcccCCCCCCc--CCCCCcccC
Q psy8183          87 Y--CGKSYTQETYLSKHMQKHAERSDKRPPI--IGIPRAALE  124 (223)
Q Consensus        87 ~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~--c~~~~~~~~  124 (223)
                      +  |++.|.+...|..|+++|+++.+|.|..  |+..+....
T Consensus        95 ~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~  136 (155)
T 2rpc_A           95 FPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSS  136 (155)
T ss_dssp             CTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHH
T ss_pred             cCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHH
Confidence            8  9999999999999999999999999997  998876443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=6.4e-19  Score=115.09  Aligned_cols=75  Identities=32%  Similarity=0.651  Sum_probs=70.6

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHH-HhCCCCCccCCc--CcccccCchhHHhhhhhhcCCCCCCcccCCccCCcc
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSR-CHQTDKPYKCNS--CYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSY   92 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~-~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f   92 (223)
                      .+++++|.|..++|++.|.+...|..|++ .|.++++|.|++  |++.|.+...|.+|+++|+++   ++|.|.+|++.|
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C~k~F   78 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT---RDYICEFSGPSS   78 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTS---CCCSCCSSSCCC
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCC---CCeeCCCCCCCC
Confidence            46889999998889999999999999999 799999999999  999999999999999999998   999999999998


Q ss_pred             C
Q psy8183          93 T   93 (223)
Q Consensus        93 ~   93 (223)
                      .
T Consensus        79 ~   79 (79)
T 2dlk_A           79 G   79 (79)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.77  E-value=4.4e-20  Score=123.37  Aligned_cols=84  Identities=21%  Similarity=0.442  Sum_probs=79.5

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHH
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYL   98 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l   98 (223)
                      +++|.|+.  |++.|.....|..|+++|.++++|.|+.|++.|.....|..|++.|++    .+|.|..|++.|.....|
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~----~~~~c~~C~~~f~~~~~L   74 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI----LPILEDKVEELLSKNYHL   74 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH----HHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC----CcchHHHHHHHHHHHhhh
Confidence            58999988  999999999999999999999999999999999999999999999985    889999999999999999


Q ss_pred             HHHHhhhccc
Q psy8183          99 SKHMQKHAER  108 (223)
Q Consensus        99 ~~H~~~h~~~  108 (223)
                      ..|++.+++.
T Consensus        75 ~~H~~~~h~~   84 (88)
T 1llm_C           75 ENEVARLKKL   84 (88)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999987643

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.76  E-value=7.5e-19  Score=108.60  Aligned_cols=57  Identities=32%  Similarity=0.767  Sum_probs=45.3

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      ||||.|++  |++.|.....|..|+++|+++++|.|.+||+.|.....|.+|+++|.++
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            67788877  8888888888888888888888888888888888888888888877764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=1e-18  Score=115.81  Aligned_cols=79  Identities=29%  Similarity=0.499  Sum_probs=70.1

Q ss_pred             HHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCC----CCccCCcCcccccCchhHHhhhhhhcCCCCCCccc
Q psy8183           9 TMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD----KPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHI   84 (223)
Q Consensus         9 ~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~----k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~   84 (223)
                      +..|+++|+++++|.|.+  |++.|.....|..|+++|+..    ++|.|.+|++.|.....|..|++.|+++   +++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~---~~~~   77 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP---DGVE   77 (86)
T ss_dssp             TTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC---CSCC
T ss_pred             cccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC---CCcc
Confidence            346889999999999988  999999999999999887665    7899999999999999999999999988   8899


Q ss_pred             CCccCCcc
Q psy8183          85 CQYCGKSY   92 (223)
Q Consensus        85 C~~C~~~f   92 (223)
                      |..|+..|
T Consensus        78 ~~~~~~~~   85 (86)
T 1x6h_A           78 GENSGPSS   85 (86)
T ss_dssp             CCCCCCCC
T ss_pred             cCCCCCCC
Confidence            99998765

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=1.5e-18  Score=107.20  Aligned_cols=58  Identities=26%  Similarity=0.665  Sum_probs=55.4

Q ss_pred             CCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccC
Q psy8183          49 DKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        49 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                      ||||.|++|++.|.....|..|+++|.++   ++|.|.+||+.|.+.+.|..|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~e---kp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGY---RPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTC---CCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCC---cCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            79999999999999999999999999999   99999999999999999999999998763

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.72  E-value=7.4e-18  Score=111.27  Aligned_cols=80  Identities=29%  Similarity=0.475  Sum_probs=74.1

Q ss_pred             CeecccCccccccCChHHHHHHHHHhCCCCCccCCc--CcccccCchhHHhhhhhhcCCCCCCcccCCc---cCCccCCh
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS--CYKCFVDETALLEHIPKHKDSKHLKTHICQY---CGKSYTQE   95 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~---C~~~f~~~   95 (223)
                      ||.|+++.|++.|.....|..|+++|.++++|.|+.  |++.|.....|.+|++.|++      |.|.+   |++.|.+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------~~C~~~~~C~~~f~~~   74 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG------YPCKKDDSCSFVGKTW   74 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS------EECCSCSSCCCEESSH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC------CCCCCCCCCCCccCCH
Confidence            689933349999999999999999999999999998  99999999999999999985      89999   99999999


Q ss_pred             HHHHHHHhhhc
Q psy8183          96 TYLSKHMQKHA  106 (223)
Q Consensus        96 ~~l~~H~~~h~  106 (223)
                      ..|..|+++|+
T Consensus        75 ~~l~~H~~~hh   85 (85)
T 2j7j_A           75 TLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhcC
Confidence            99999999874

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.72  E-value=1.3e-17  Score=115.02  Aligned_cols=80  Identities=30%  Similarity=0.574  Sum_probs=75.7

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHL   80 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   80 (223)
                      +.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|.++++|.|.+|++.|.+...|..|+++|.++   
T Consensus        25 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~---   99 (106)
T 2ee8_A           25 RHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQT---   99 (106)
T ss_dssp             CBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSC---
T ss_pred             CccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCC---
Confidence            46899999999999999999999988  9999999999999999999999999999999999999999999999998   


Q ss_pred             CcccC
Q psy8183          81 KTHIC   85 (223)
Q Consensus        81 k~~~C   85 (223)
                      ++|.+
T Consensus       100 ~~~~~  104 (106)
T 2ee8_A          100 SSPTA  104 (106)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            77754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=5.3e-18  Score=115.58  Aligned_cols=82  Identities=13%  Similarity=0.182  Sum_probs=67.3

Q ss_pred             cccccCChHHHHHHHHHhCCCCCccCCcCccccc-CchhHHhhhhhhcC-CCCCCcccCCccCCccCChHHHHHHHhhhc
Q psy8183          29 CVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFV-DETALLEHIPKHKD-SKHLKTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        29 C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      +...+.....+..|+++|.++++|.|++|++.|. ....|.+|++.|++ +   ++|.|.+|++.|.+...|..|+++|+
T Consensus         2 ss~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~---~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            2 SSGSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQ---DALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHH---HHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCC---CCEECCCCCCccCCHHHHHHHHHHHc
Confidence            3445666667788888888888888988988888 88888889888887 6   88999999999999999999998888


Q ss_pred             ccCCCCC
Q psy8183         107 ERSDKRP  113 (223)
Q Consensus       107 ~~~~~~~  113 (223)
                      ++++...
T Consensus        79 ~~kp~~~   85 (98)
T 2gqj_A           79 SAKPSDA   85 (98)
T ss_dssp             CSCSSCC
T ss_pred             CCCCCCC
Confidence            7765443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=2.2e-17  Score=110.26  Aligned_cols=75  Identities=29%  Similarity=0.598  Sum_probs=71.3

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      +.|..+..|..|+++|.++++|.|..  |++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|+++
T Consensus        14 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           14 RRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ   88 (90)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC-
T ss_pred             CccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhccc
Confidence            36889999999999999999999988  9999999999999999999999999999999999999999999999986

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.69  E-value=2.1e-17  Score=108.34  Aligned_cols=74  Identities=30%  Similarity=0.561  Sum_probs=70.1

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      +.|.....|..|+++|.++++|.|..  |++.|.....|..|+++|.++++|.|+.|++.|.+...|..|+++|+|
T Consensus         9 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A            9 KSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             ccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            46889999999999999999999988  999999999999999999999999999999999999999999999874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=5.2e-17  Score=109.83  Aligned_cols=75  Identities=31%  Similarity=0.561  Sum_probs=72.4

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      +.|..+..|..|+++|.++++|.|+.  |++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+++
T Consensus        16 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   90 (96)
T 2dmd_A           16 KCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGD   90 (96)
T ss_dssp             BCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence            46899999999999999999999988  9999999999999999999999999999999999999999999999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=6.6e-17  Score=110.05  Aligned_cols=76  Identities=33%  Similarity=0.634  Sum_probs=71.1

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      +.|.....|..|+++|.++++|.|.++.|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|.+
T Consensus        25 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           25 KVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            3588999999999999999999996445999999999999999999999999999999999999999999999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.67  E-value=9.7e-17  Score=106.88  Aligned_cols=75  Identities=31%  Similarity=0.613  Sum_probs=70.1

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhc
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHK   75 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~   75 (223)
                      +.|..+..|..|+++|.++++|.|+++.|++.|.....|..|+++|.++++|.|+.|++.|.....|..|++.|.
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           15 KTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             CEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            368899999999999999999999744599999999999999999999999999999999999999999999873

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=7.5e-17  Score=104.77  Aligned_cols=66  Identities=36%  Similarity=0.712  Sum_probs=53.6

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      .+.++++|.|++  |++.|.....|..|+++|.++++|.|++|++.|.....|.+|+++|+++   ++|.|
T Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~---~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS---GPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCC---CCCCC
T ss_pred             cCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCC---CCCCC
Confidence            456778888877  8888888888888888888888888888888888888888888888877   77776

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=1.2e-17  Score=113.89  Aligned_cols=73  Identities=19%  Similarity=0.268  Sum_probs=67.9

Q ss_pred             CccHHHHHHHHHhCCCCCCeecccCccccccC-ChHHHHHHHHHhCC-CCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183           3 LAGQELTMEIRRTHTGDKPYKCRHPGCVKAFS-QLSNLQSHSRCHQT-DKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus         3 f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~-~~~~L~~H~~~h~~-~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      +.....+..|+++|+++++|.|..  |++.|. ....|..|+++|++ +++|.|.+|++.|.+...|.+|++.|+++
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            344556778999999999999988  999999 99999999999998 99999999999999999999999999998

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.1e-16  Score=108.58  Aligned_cols=75  Identities=16%  Similarity=0.231  Sum_probs=50.7

Q ss_pred             cccCChHHHHHHHHHhCCCCCccCCcCcccc-cCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHH-Hhhhccc
Q psy8183          31 KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCF-VDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKH-MQKHAER  108 (223)
Q Consensus        31 k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~  108 (223)
                      ..|.....|..|++.|.++++|.|+.|++.| .....|..|++.| ++   ++|.|.+|++.|.+...|..| +++|.++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~---k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQ---EMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CC---CCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CC---CCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            3455566666676666666777777777777 6777777777776 55   667777777777777777777 6666544


Q ss_pred             C
Q psy8183         109 S  109 (223)
Q Consensus       109 ~  109 (223)
                      .
T Consensus        90 p   90 (96)
T 2ctd_A           90 P   90 (96)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.1e-16  Score=107.21  Aligned_cols=73  Identities=15%  Similarity=0.261  Sum_probs=67.7

Q ss_pred             CCccHHHHHHHHHhCCCCCCeecccCcccccc-CChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhh-hhhhcCC
Q psy8183           2 DLAGQELTMEIRRTHTGDKPYKCRHPGCVKAF-SQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEH-IPKHKDS   77 (223)
Q Consensus         2 ~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f-~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~   77 (223)
                      .|.....|..|+++|.++++|.|+.  |++.| .....|..|+++| ++++|.|.+|++.|.....|..| +++|.++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            3566778899999999999999988  99999 9999999999999 99999999999999999999999 8888763

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.1e-16  Score=109.52  Aligned_cols=69  Identities=20%  Similarity=0.317  Sum_probs=61.8

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHH-Hh---CCCCCccCCcCcccccCchhHHhh-hhhhcCCCCCCcccCCccC
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSR-CH---QTDKPYKCNSCYKCFVDETALLEH-IPKHKDSKHLKTHICQYCG   89 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~-~h---~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~k~~~C~~C~   89 (223)
                      -+|+++|.|++  |++.|.....|..|++ +|   .++++|.|+.|++.|.....|..| +++|.++   ++|.|.++.
T Consensus        13 ~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htge---kpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE---ENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTC---CCEEEEECC
T ss_pred             CCCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCC---CCeeCCccc
Confidence            47899999988  9999999999999998 58   568899999999999999999999 7899998   899998754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=7.4e-17  Score=106.76  Aligned_cols=82  Identities=26%  Similarity=0.491  Sum_probs=72.9

Q ss_pred             HHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCC-CCCcccCCccCCccCChHHHHHHHhhhcccCCCCCCcC
Q psy8183          38 NLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK-HLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPII  116 (223)
Q Consensus        38 ~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~c  116 (223)
                      .|.+|+++|.++++|.|.+|++.|.....|.+|++.++... ..++|.|.+|++.|.+...|..|+++|+++.++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            35678999999999999999999999999999998877642 12689999999999999999999999999999999888


Q ss_pred             CCC
Q psy8183         117 GIP  119 (223)
Q Consensus       117 ~~~  119 (223)
                      +..
T Consensus        82 ~~~   84 (86)
T 1x6h_A           82 GPS   84 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            753

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=4.9e-16  Score=104.74  Aligned_cols=75  Identities=31%  Similarity=0.532  Sum_probs=69.6

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCC--CCccCCcCcccccCchhHHhhhh-hhcCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD--KPYKCNSCYKCFVDETALLEHIP-KHKDS   77 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~--k~~~C~~C~~~f~~~~~l~~H~~-~h~~~   77 (223)
                      +.|.....|..|+++|.++++|.|..  |++.|.+...|..|+++|+++  ++|.|.+|++.|.+...|..|++ .|.++
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           15 KIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             CEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            35888999999999999999999988  999999999999999999987  89999999999999999999996 66654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.63  E-value=4.2e-16  Score=100.38  Aligned_cols=61  Identities=38%  Similarity=0.707  Sum_probs=49.5

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      .+.++++|.|..  |++.|.....|..|+++|.++++|.|.+|++.|.+...|.+|+++|+++
T Consensus        11 ~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           11 MTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             ccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            466778888876  8888888888888888888888888888888888888888888888776

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.2e-16  Score=100.45  Aligned_cols=63  Identities=43%  Similarity=0.808  Sum_probs=46.1

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      .++|+++++|.|++  |++.|.....|..|+++|.++++|.|++|++.|.....|.+|+++|+++
T Consensus         6 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            35677777777766  7777777777777777777777777777777777777777777777654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=4e-16  Score=108.17  Aligned_cols=74  Identities=27%  Similarity=0.494  Sum_probs=70.8

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      +.|..+..|..|+++|.++++|.|..  |++.|.....|..|+++|.++++|.|++|++.|.....|.+|++.|+.
T Consensus        17 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           17 KSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             CEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            46889999999999999999999988  999999999999999999999999999999999999999999999874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=5.3e-16  Score=98.82  Aligned_cols=61  Identities=31%  Similarity=0.573  Sum_probs=48.0

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      +|+++++|.|++  |++.|.....|..|+++|.++++|.|++|++.|.....|.+|++.|+++
T Consensus         3 s~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            3 SGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             SCCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            467778888876  8888888888888888887777788888888888878888888777776

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=6.8e-16  Score=100.17  Aligned_cols=66  Identities=27%  Similarity=0.530  Sum_probs=62.1

Q ss_pred             HhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccCCCCC
Q psy8183          45 CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRP  113 (223)
Q Consensus        45 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  113 (223)
                      .+.++++|.|++|++.|.....|.+|++.|.++   ++|.|.+|++.|.+...|..|+++|+++.+|.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE---KPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS---CSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCC---cCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            356789999999999999999999999999998   899999999999999999999999999988876

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=4.6e-16  Score=107.41  Aligned_cols=78  Identities=17%  Similarity=0.205  Sum_probs=71.7

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhh-hhcCCCC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP-KHKDSKH   79 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~   79 (223)
                      +.|..+..|..|+++|  +++|.|.+  |++.|.....|..|++ |.++++|.|++|++.|.....|.+|++ .|.++  
T Consensus        24 ~~f~~~~~l~~H~~~H--~~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~--   96 (107)
T 1wjp_A           24 AKLSSLLEQGSHERLC--RNAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN--   96 (107)
T ss_dssp             CBCSSHHHHHHHHHHH--HHSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCC--
T ss_pred             CccCCHHHHHHHHHHC--CCCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCC--
Confidence            4689999999999999  47999988  9999999999999996 999999999999999999999999997 88777  


Q ss_pred             CCcccCC
Q psy8183          80 LKTHICQ   86 (223)
Q Consensus        80 ~k~~~C~   86 (223)
                       ++|.|.
T Consensus        97 -~~~~~~  102 (107)
T 1wjp_A           97 -NMAPTS  102 (107)
T ss_dssp             -CCCCCC
T ss_pred             -CCCCCC
Confidence             888764

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.60  E-value=3.6e-17  Score=116.79  Aligned_cols=83  Identities=19%  Similarity=0.275  Sum_probs=72.4

Q ss_pred             CCCCeecccCccccccC------ChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCc
Q psy8183          18 GDKPYKCRHPGCVKAFS------QLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKS   91 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~------~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~   91 (223)
                      .++.+.|+.  |.+.|.      ....|..|+ .|+++++|.|+.|++.|.....|..|+++|  +   ++|.|.+|++.
T Consensus        38 ~~~~~~c~~--~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~---~~~~C~~C~k~  109 (129)
T 2wbt_A           38 EQKRLIRAI--VKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--E---HTKVCPVCKKE  109 (129)
T ss_dssp             HHHHHHHHH--HHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--C---CCCBCTTTCCB
T ss_pred             hhCcccchh--hhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--C---CCCCCCCCCcc
Confidence            346678877  877665      667777776 688899999999999999999999999998  4   89999999999


Q ss_pred             cCChHHHHHHHhhhccc
Q psy8183          92 YTQETYLSKHMQKHAER  108 (223)
Q Consensus        92 f~~~~~l~~H~~~h~~~  108 (223)
                      |.+...|..|+++|++.
T Consensus       110 f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          110 FTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CSSHHHHHHHHHHTTCC
T ss_pred             cCCHHHHHHHHHHHCCc
Confidence            99999999999999864

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=9e-16  Score=98.31  Aligned_cols=64  Identities=33%  Similarity=0.615  Sum_probs=60.1

Q ss_pred             HHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccC
Q psy8183          43 SRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        43 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                      .++|.++++|.|++|++.|.....|.+|++.|.++   ++|.|.+|++.|.+...|..|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~---~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE---KPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS---CCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCC---CCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            45789999999999999999999999999999998   99999999999999999999999998754

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=1.7e-15  Score=97.51  Aligned_cols=64  Identities=28%  Similarity=0.582  Sum_probs=59.8

Q ss_pred             HhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccCCC
Q psy8183          45 CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDK  111 (223)
Q Consensus        45 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  111 (223)
                      .+.++++|.|..|++.|.....|..|++.|.++   ++|.|.+|++.|.+...|..|+++|+++++|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGE---KPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCC---CSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCC---CCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            467789999999999999999999999999998   8999999999999999999999999987654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.6e-15  Score=96.57  Aligned_cols=64  Identities=28%  Similarity=0.449  Sum_probs=59.6

Q ss_pred             HhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccCCC
Q psy8183          45 CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDK  111 (223)
Q Consensus        45 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  111 (223)
                      .|.++++|.|++|++.|.....|.+|++.|.++   ++|.|.+|++.|.+...|..|+++|+++.+.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTD---RPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCS---CSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCC---CCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            367899999999999999999999999999988   8999999999999999999999999987653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=4.8e-16  Score=97.75  Aligned_cols=62  Identities=26%  Similarity=0.627  Sum_probs=49.7

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHHHHH-h-CCCCCccCCcCcccccCchhHHhhhhhhcC
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRC-H-QTDKPYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~-h-~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      +++|+++++|.|+.  |++.|.+...|..|+++ | .++++|.|+.|++.|.+...|..|++.+++
T Consensus         2 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            56788888888877  88888888888888887 6 477888888888888888888888887765

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=8.7e-16  Score=99.65  Aligned_cols=66  Identities=27%  Similarity=0.557  Sum_probs=50.9

Q ss_pred             HHHHHhCCCCCCeecccCccccccCChHHHHHHHH-HhCCC-CCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          10 MEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSR-CHQTD-KPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        10 ~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~-~h~~~-k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      ..|+++|+++++|.|++  |++.|.....|..|++ .|.++ ++|.|++|++.|.+...|..|++.+++.
T Consensus         4 ~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            35777888888888877  8888888888888886 56654 6788888888888888888888776654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.58  E-value=1.7e-15  Score=99.81  Aligned_cols=72  Identities=29%  Similarity=0.496  Sum_probs=67.4

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc---CcccccCchhHHhhhhhhc
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS---CYKCFVDETALLEHIPKHK   75 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~---C~~~f~~~~~l~~H~~~h~   75 (223)
                      +.|..+..|..|+++|.++++|.|++++|++.|.+...|..|+++|++   |.|..   |++.|.....|..|++.|+
T Consensus        11 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           11 KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            468899999999999999999999766799999999999999999987   99999   9999999999999999875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=4.5e-15  Score=96.52  Aligned_cols=71  Identities=25%  Similarity=0.451  Sum_probs=66.5

Q ss_pred             CCCCCccCCc--CcccccCchhHHhhhh-hhcCCCCCCcccCCc--cCCccCChHHHHHHHhhhcccCCCCCCcCCCCC
Q psy8183          47 QTDKPYKCNS--CYKCFVDETALLEHIP-KHKDSKHLKTHICQY--CGKSYTQETYLSKHMQKHAERSDKRPPIIGIPR  120 (223)
Q Consensus        47 ~~~k~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~c~~~~  120 (223)
                      +++++|.|..  |++.|.+...|..|++ .|.++   ++|.|.+  |++.|.+...|..|+++|+++.+|.|..|+..+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~---~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ---KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSC---CCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCC---CCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            5678999997  9999999999999999 78887   9999999  999999999999999999999999999999865

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=4.3e-16  Score=101.11  Aligned_cols=68  Identities=26%  Similarity=0.514  Sum_probs=60.3

Q ss_pred             HHHHHHHhCCCCCccCCcCcccccCchhHHhhhh-hhcCCCCCCcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          39 LQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIP-KHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        39 L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      |.+|+++|.++++|.|++|++.|.....|.+|++ .|.++.  ++|.|.+|++.|.+...|..|+++++..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~--~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENV--AKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSC--SSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCC--CccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            4568899999999999999999999999999997 565432  7899999999999999999999987653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.56  E-value=2.2e-15  Score=91.76  Aligned_cols=56  Identities=34%  Similarity=0.615  Sum_probs=35.4

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhc
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHK   75 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~   75 (223)
                      |+++|.|.+  |++.|.+...|..|+++|.++++|.|+.|++.|.....|..|++.|+
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            356666765  77777666667667666666666666666666666666666666655

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.56  E-value=3e-15  Score=98.90  Aligned_cols=54  Identities=20%  Similarity=0.425  Sum_probs=31.9

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhh
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHI   71 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~   71 (223)
                      +.+.++|.|++  |++.|.+...|.+|+++|+++++|.|++|++.|.+...|.+|+
T Consensus        23 ~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           23 SASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             CCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            34455566655  6666666666666666666666666666666666666666664

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.5e-15  Score=97.44  Aligned_cols=62  Identities=31%  Similarity=0.642  Sum_probs=46.3

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhh
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKH   74 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h   74 (223)
                      ..+|.++++|.|+++.|++.|.....|..|+++|.++++|.|++|++.|.....|.+|+++|
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            34567777888853348888888888888877777777777777777777777777777765

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.55  E-value=3.8e-15  Score=106.20  Aligned_cols=71  Identities=21%  Similarity=0.399  Sum_probs=65.8

Q ss_pred             CCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183           2 DLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus         2 ~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      .|....+|.+|+ .|+++++|.|++  |++.|.....|..|+++|  +++|.|+.|++.|.....|.+|++.|++.
T Consensus        56 ~~~~~~~l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           56 LLDESSYLYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             GTTTHHHHHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             ccCCHHHHHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            356788888888 589999999988  999999999999999999  88999999999999999999999999975

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.54  E-value=5.3e-15  Score=90.05  Aligned_cols=57  Identities=26%  Similarity=0.503  Sum_probs=50.6

Q ss_pred             CCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          48 TDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        48 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++++|.|..|++.|.+...|..|++.|.++   ++|.|.+|++.|.+...|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGE---KPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCC---CCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCC---CCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            468999999999999999999999999998   899999999999999999999999863

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=6.2e-15  Score=95.77  Aligned_cols=57  Identities=25%  Similarity=0.426  Sum_probs=39.8

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCC---CCCccCCcCcccccCchhHHhhhhh
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQT---DKPYKCNSCYKCFVDETALLEHIPK   73 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~---~k~~~C~~C~~~f~~~~~l~~H~~~   73 (223)
                      +|+++++|.|++  |++.|.....|..|+++|.+   +++|.|.+|++.|.....|.+|++.
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~   60 (78)
T 2d9h_A            1 GSSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK   60 (78)
T ss_dssp             CCCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHH
Confidence            467777777766  77777777777777777764   5666666666666666666666643

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.2e-15  Score=103.02  Aligned_cols=70  Identities=17%  Similarity=0.304  Sum_probs=63.1

Q ss_pred             CCCCCccCCcCcccccCchhHHhhhh-hh---cCCCCCCcccCCccCCccCChHHHHHH-HhhhcccCCCCCCcCCCC
Q psy8183          47 QTDKPYKCNSCYKCFVDETALLEHIP-KH---KDSKHLKTHICQYCGKSYTQETYLSKH-MQKHAERSDKRPPIIGIP  119 (223)
Q Consensus        47 ~~~k~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~~~~c~~~  119 (223)
                      .++++|.|..|++.|.....|.+|++ .|   .++   ++|.|.+||+.|.+...|..| +++|.++++|.|.++...
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~e---kpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~~   88 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLN---SSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRN   88 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCS---CCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCCS
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCC---CCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccCC
Confidence            57899999999999999999999998 48   445   899999999999999999999 899999999999875543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=2.9e-15  Score=94.12  Aligned_cols=61  Identities=18%  Similarity=0.525  Sum_probs=56.3

Q ss_pred             HHhCCCCCccCCcCcccccCchhHHhhhhh-h-cCCCCCCcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          44 RCHQTDKPYKCNSCYKCFVDETALLEHIPK-H-KDSKHLKTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        44 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++|.++++|.|+.|++.|.....|..|++. | .++   ++|.|.+|++.|.+...|..|++++++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~---~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNV---KVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSC---CCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCC---cCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            468899999999999999999999999998 5 366   899999999999999999999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=8.1e-15  Score=96.85  Aligned_cols=62  Identities=18%  Similarity=0.397  Sum_probs=55.6

Q ss_pred             HHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHh-hhccc
Q psy8183          44 RCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQ-KHAER  108 (223)
Q Consensus        44 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~  108 (223)
                      ..+...++|.|++|++.|.+...|.+|+++|+++   ++|.|.+|++.|.+...|.+|++ +|.++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAA---QVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCS---SSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCC---CccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3456778899999999999999999999999998   99999999999999999999975 46543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=2e-17  Score=106.06  Aligned_cols=70  Identities=26%  Similarity=0.315  Sum_probs=60.7

Q ss_pred             HHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183           7 ELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus         7 ~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      ..|..|+++|.++++|.|+.  |++.|.....|..       +++|.|+.|++.|.....|..|++.|.++   ++|.|.
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~---~~~~C~   71 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGK---KTSGPS   71 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCC---CCSSCC
T ss_pred             hhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCC---CCCCCC
Confidence            34567888999999999987  9999998888776       67899999999999999999999999888   889998


Q ss_pred             cc
Q psy8183          87 YC   88 (223)
Q Consensus        87 ~C   88 (223)
                      +|
T Consensus        72 ~C   73 (73)
T 2ctu_A           72 SG   73 (73)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=3.3e-15  Score=104.30  Aligned_cols=75  Identities=17%  Similarity=0.115  Sum_probs=69.2

Q ss_pred             CCCccHHHHHHHHHh--CCCCCCee-cccCcccccc--CChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhc
Q psy8183           1 MDLAGQELTMEIRRT--HTGDKPYK-CRHPGCVKAF--SQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHK   75 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~--H~~~k~~~-C~~p~C~k~f--~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~   75 (223)
                      +.|..+..|..|+++  |.+++++. |.+  |++.|  .....|..|+++|.++++|.|++|++.|.....|.+|++.|+
T Consensus        27 k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           27 AAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             CEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred             chhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhC
Confidence            468999999999999  88887765 988  99999  899999999999999999999999999999999999999988


Q ss_pred             CC
Q psy8183          76 DS   77 (223)
Q Consensus        76 ~~   77 (223)
                      ..
T Consensus       105 ~~  106 (115)
T 2dmi_A          105 HY  106 (115)
T ss_dssp             TT
T ss_pred             Cc
Confidence            76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.2e-14  Score=94.36  Aligned_cols=65  Identities=20%  Similarity=0.374  Sum_probs=55.8

Q ss_pred             HhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhh-hcccC
Q psy8183          45 CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQK-HAERS  109 (223)
Q Consensus        45 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~-h~~~~  109 (223)
                      +|+++++|.|++|++.|.....|.+|++.|.+....++|.|.+|++.|.+...|..|++. |.++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            378999999999999999999999999999862111899999999999999999999965 44433

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.49  E-value=3.4e-14  Score=86.41  Aligned_cols=55  Identities=29%  Similarity=0.577  Sum_probs=41.0

Q ss_pred             CeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      ||.|+.  |++.|.....|..|+++|.++++|.|+.|++.|.....|.+|+++|+++
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            467766  7777777777777777777777777777777777777777777777665

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.48  E-value=3.4e-14  Score=86.40  Aligned_cols=56  Identities=30%  Similarity=0.588  Sum_probs=52.8

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccC
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                      ||.|+.|++.|.....|..|++.|.++   ++|.|.+|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDV---RPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSC---CCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCC---CCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            589999999999999999999999998   99999999999999999999999988653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.46  E-value=4.9e-15  Score=98.59  Aligned_cols=73  Identities=19%  Similarity=0.368  Sum_probs=68.1

Q ss_pred             CCCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcC
Q psy8183           1 MDLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus         1 ~~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      +.|..+..|..|+++|+++++|.|+.  |++.|.....|..|+++|++ .+|.|+.|++.|.....|..|++.+++
T Consensus        11 k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           11 RNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             CEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence            46899999999999999999999988  99999999999999999885 789999999999999999999987764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=7.3e-14  Score=85.86  Aligned_cols=55  Identities=31%  Similarity=0.780  Sum_probs=34.3

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhh-hhhcC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHI-PKHKD   76 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~-~~h~~   76 (223)
                      ++|.|+.  |++.|.+...|..|+++|+++++|.|+.|++.|.+...|.+|+ +.|.+
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            3566655  6666666666666666666666666666666666666666664 34444

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=2.2e-14  Score=91.89  Aligned_cols=65  Identities=25%  Similarity=0.571  Sum_probs=57.2

Q ss_pred             HHHHHH-HhCCCCCccCC--cCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhc
Q psy8183          39 LQSHSR-CHQTDKPYKCN--SCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        39 L~~H~~-~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      |..|+. +|.++++|.|+  .|++.|.....|.+|++.|.++   ++|.|.+|++.|.+...|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQ---KPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCC---CCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCC---CCeECCCCCchhCCHHHHHHHHHhcC
Confidence            444544 47889999997  5999999999999999999998   89999999999999999999999874

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=9.4e-14  Score=85.36  Aligned_cols=56  Identities=23%  Similarity=0.619  Sum_probs=51.8

Q ss_pred             CCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHH-hhhccc
Q psy8183          50 KPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHM-QKHAER  108 (223)
Q Consensus        50 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~-~~h~~~  108 (223)
                      ++|.|+.|++.|.....|..|++.|.++   ++|.|.+|++.|.+...|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE---KPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS---CSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCC---CCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5799999999999999999999999988   8999999999999999999997 567654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=1.3e-16  Score=102.11  Aligned_cols=71  Identities=24%  Similarity=0.413  Sum_probs=65.2

Q ss_pred             hHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccCCCCCCc
Q psy8183          36 LSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRPPI  115 (223)
Q Consensus        36 ~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  115 (223)
                      ...|..|+++|.++++|.|+.|++.|.....|..       +   ++|.|.+|++.|.+...|..|+++|+++.+|.|..
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~---~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------R---KTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------S---SSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------C---CCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            4567889999999999999999999999998876       4   89999999999999999999999999999999987


Q ss_pred             C
Q psy8183         116 I  116 (223)
Q Consensus       116 c  116 (223)
                      |
T Consensus        73 C   73 (73)
T 2ctu_A           73 G   73 (73)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.44  E-value=1.3e-13  Score=87.95  Aligned_cols=59  Identities=32%  Similarity=0.691  Sum_probs=44.6

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc--CcccccCchhHHhhhhhh
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS--CYKCFVDETALLEHIPKH   74 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h   74 (223)
                      +.+.++|.|.+++|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45567788876668888888888888888887777888854  888887777777777654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=9.8e-14  Score=79.83  Aligned_cols=44  Identities=36%  Similarity=0.573  Sum_probs=39.7

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            567899999999987  99999999999999999999999999887

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=4e-13  Score=90.29  Aligned_cols=59  Identities=22%  Similarity=0.372  Sum_probs=30.9

Q ss_pred             ccCCcCcccccCchhHHhhhhh-hcCCCCCCc--------ccCCccCCccCChHHHHHHHhhhcccCCCCC
Q psy8183          52 YKCNSCYKCFVDETALLEHIPK-HKDSKHLKT--------HICQYCGKSYTQETYLSKHMQKHAERSDKRP  113 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~k~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  113 (223)
                      |.|..|++.|.....|.+|++. |.++   ++        |.|.+|++.|.....|..|+++|+++++|.|
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~---~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGG---PEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCC---TTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CcccccccccCCHHHHHHHHHHhccCC---CCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            3444555555555555555444 4333   22        5555555555555555556555555555555

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.2e-13  Score=80.20  Aligned_cols=45  Identities=36%  Similarity=0.583  Sum_probs=40.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3678899999999987  99999999999999999999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.1e-13  Score=80.32  Aligned_cols=45  Identities=36%  Similarity=0.588  Sum_probs=39.8

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3678899999999977  99999999999999999999999999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.39  E-value=1.1e-13  Score=80.50  Aligned_cols=44  Identities=39%  Similarity=0.639  Sum_probs=38.5

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            677888889999977  99999999999999888888888988877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.5e-13  Score=79.80  Aligned_cols=45  Identities=40%  Similarity=0.622  Sum_probs=40.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999987  99999999999999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.39  E-value=1.3e-13  Score=80.17  Aligned_cols=45  Identities=42%  Similarity=0.720  Sum_probs=39.6

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3678899999999977  99999999999999999999999999877

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=80.22  Aligned_cols=45  Identities=40%  Similarity=0.635  Sum_probs=39.9

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3678899999999977  99999999999999999999999999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.3e-13  Score=80.08  Aligned_cols=45  Identities=42%  Similarity=0.656  Sum_probs=40.0

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3678899999999987  99999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.5e-13  Score=79.76  Aligned_cols=45  Identities=36%  Similarity=0.639  Sum_probs=40.5

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            3678899999999987  99999999999999999999999999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=79.95  Aligned_cols=45  Identities=40%  Similarity=0.653  Sum_probs=40.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            3678899999999987  99999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1e-13  Score=80.58  Aligned_cols=44  Identities=34%  Similarity=0.567  Sum_probs=38.0

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            677888888888877  89888888888888888888888888876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.38  E-value=1.3e-13  Score=80.15  Aligned_cols=45  Identities=38%  Similarity=0.610  Sum_probs=39.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3678888999999977  99999999999999989988899998877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=80.21  Aligned_cols=44  Identities=39%  Similarity=0.630  Sum_probs=38.3

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            677888889999977  99999999999999888888888888877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=80.26  Aligned_cols=45  Identities=40%  Similarity=0.649  Sum_probs=39.7

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3678899999999977  99999999999999999999999999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.3e-13  Score=80.14  Aligned_cols=45  Identities=40%  Similarity=0.589  Sum_probs=39.8

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3678899999999987  99999999999999999999999999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.5e-13  Score=79.80  Aligned_cols=45  Identities=40%  Similarity=0.665  Sum_probs=39.8

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            3678899999999977  99999999999999999999999999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=80.22  Aligned_cols=45  Identities=38%  Similarity=0.629  Sum_probs=39.8

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3678899999999987  99999999999999999999999999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=80.32  Aligned_cols=44  Identities=41%  Similarity=0.640  Sum_probs=37.3

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            677888888888877  88888888888888888888888888876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.6e-13  Score=79.72  Aligned_cols=45  Identities=38%  Similarity=0.609  Sum_probs=39.6

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678899999999977  99999999999999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.38  E-value=1.2e-13  Score=80.30  Aligned_cols=44  Identities=36%  Similarity=0.579  Sum_probs=36.9

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            677888888888877  88888888888888888888888888876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=80.20  Aligned_cols=45  Identities=29%  Similarity=0.519  Sum_probs=40.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999987  99999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.4e-13  Score=80.02  Aligned_cols=44  Identities=41%  Similarity=0.613  Sum_probs=38.1

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|++  |++.|.+...|.+|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            677888888899977  99999988889999888888888888877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.8e-13  Score=79.48  Aligned_cols=45  Identities=36%  Similarity=0.664  Sum_probs=39.4

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4678889999999977  99999999999999999999999999887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.7e-13  Score=79.62  Aligned_cols=45  Identities=36%  Similarity=0.634  Sum_probs=40.1

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4678899999999987  99999999999999999999999999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.4e-13  Score=80.00  Aligned_cols=44  Identities=36%  Similarity=0.597  Sum_probs=38.7

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            677888999999977  99999999999999989998899998887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.38  E-value=1.2e-13  Score=80.15  Aligned_cols=45  Identities=40%  Similarity=0.572  Sum_probs=39.0

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3677888899999977  99999999999999888988888988877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.9e-13  Score=79.35  Aligned_cols=45  Identities=36%  Similarity=0.586  Sum_probs=39.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3678889999999977  99999999999999999998899998887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.8e-13  Score=79.50  Aligned_cols=45  Identities=40%  Similarity=0.653  Sum_probs=40.9

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            3678899999999988  99999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.9e-13  Score=79.33  Aligned_cols=44  Identities=36%  Similarity=0.605  Sum_probs=39.8

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|++|
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            678899999999987  99999999999999999999999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2e-13  Score=79.28  Aligned_cols=45  Identities=24%  Similarity=0.316  Sum_probs=40.7

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4678899999999988  99999999999999999999999999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=79.84  Aligned_cols=45  Identities=38%  Similarity=0.567  Sum_probs=38.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677888888888877  88888888888888888888888888877

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.3e-13  Score=80.06  Aligned_cols=44  Identities=32%  Similarity=0.533  Sum_probs=37.2

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            567888888888877  88888888888888888888888888877

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.5e-13  Score=79.82  Aligned_cols=44  Identities=39%  Similarity=0.631  Sum_probs=38.6

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            677888999999977  99999999999999888988889998877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.9e-13  Score=79.34  Aligned_cols=45  Identities=40%  Similarity=0.690  Sum_probs=40.0

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999977  99999999999999999999999999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.37  E-value=1.6e-13  Score=79.64  Aligned_cols=45  Identities=38%  Similarity=0.637  Sum_probs=39.0

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3678888999999977  99999999999999888988888988877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.9e-13  Score=79.34  Aligned_cols=45  Identities=40%  Similarity=0.524  Sum_probs=39.9

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4678899999999977  99999999999999999999999999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.6e-13  Score=79.72  Aligned_cols=45  Identities=27%  Similarity=0.462  Sum_probs=39.5

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3678889999999977  99999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.7e-13  Score=79.68  Aligned_cols=44  Identities=39%  Similarity=0.624  Sum_probs=38.3

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            567888889999977  99999999999999888888888988877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.7e-13  Score=79.52  Aligned_cols=45  Identities=29%  Similarity=0.436  Sum_probs=39.6

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3678899999999977  99999999999999999999999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.36  E-value=2.3e-13  Score=79.02  Aligned_cols=44  Identities=36%  Similarity=0.585  Sum_probs=39.1

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577899999999987  99999999999999999999999999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.6e-13  Score=79.72  Aligned_cols=44  Identities=34%  Similarity=0.648  Sum_probs=39.9

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            678899999999977  99999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.6e-13  Score=79.71  Aligned_cols=45  Identities=47%  Similarity=0.721  Sum_probs=37.8

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3677888888888877  88888888888888888888888888877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.3e-13  Score=80.13  Aligned_cols=45  Identities=42%  Similarity=0.675  Sum_probs=38.6

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3677888888999977  99999988999999888888888888877

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.2e-13  Score=79.14  Aligned_cols=44  Identities=32%  Similarity=0.551  Sum_probs=39.5

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            577899999999977  99999999999999999999999999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.5e-13  Score=78.86  Aligned_cols=45  Identities=40%  Similarity=0.688  Sum_probs=38.8

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3678888999999977  99999999999999988988889988865

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4e-13  Score=77.98  Aligned_cols=44  Identities=41%  Similarity=0.668  Sum_probs=39.6

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            678899999999987  99999999999999999999999999875

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.4e-13  Score=79.89  Aligned_cols=45  Identities=36%  Similarity=0.643  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3667788888888877  88888888888888888888888888776

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=7.3e-13  Score=83.11  Aligned_cols=58  Identities=24%  Similarity=0.453  Sum_probs=43.9

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC-cCcccccCchhHHhhhhhhcCC
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN-SCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~-~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      ..++++|.|++  |++.|. ...|..|+++ .++++|.|+ .|++.|.....|..|+++|-..
T Consensus         5 ~C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            5 SSGKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             cCCCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            34667788866  888888 7778888777 777778887 7888887777788887776654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.34  E-value=9.9e-13  Score=79.13  Aligned_cols=47  Identities=30%  Similarity=0.611  Sum_probs=38.9

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHH-HhCCCCCccCCcCcccccC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSR-CHQTDKPYKCNSCYKCFVD   63 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~-~h~~~k~~~C~~C~~~f~~   63 (223)
                      .|+++++|.|++  |++.|.....|..|++ +|.++++|.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            467788888877  8888888888888886 7888888888888888865

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.33  E-value=2e-12  Score=86.85  Aligned_cols=61  Identities=23%  Similarity=0.347  Sum_probs=56.7

Q ss_pred             CeecccCccccccCChHHHHHHHHH-hCCCCC--------ccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRC-HQTDKP--------YKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~-h~~~k~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      .|.|..  |++.|.....|..|+++ |.++++        |.|+.|++.|.....|.+|+++|+++   ++|.|.
T Consensus        25 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   94 (95)
T 2ej4_A           25 SRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE---KSGPSS   94 (95)
T ss_dssp             SSSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTC---CCCSSC
T ss_pred             CCcccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCC---CCCCCC
Confidence            467877  99999999999999998 888887        99999999999999999999999998   899986

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.6e-13  Score=78.45  Aligned_cols=44  Identities=41%  Similarity=0.601  Sum_probs=38.2

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHH-HhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSR-CHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~-~h~~~k~~~C~~C   57 (223)
                      |+++|+++++|.|++  |++.|.....|..|++ +|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            677888888999977  9999999999999988 8888888888877

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=9.8e-13  Score=82.50  Aligned_cols=58  Identities=19%  Similarity=0.349  Sum_probs=52.9

Q ss_pred             CCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC-ccCCccCChHHHHHHHhhhcccC
Q psy8183          47 QTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ-YCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        47 ~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~-~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                      .++++|.|..|++.|. ...|..|+++ .++   ++|.|. .|++.|.....|..|+++|....
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~---~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPR---LPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSS---SEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCC---cCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            4578999999999999 9999999998 777   999999 99999999999999999986543

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.29  E-value=1.1e-12  Score=76.15  Aligned_cols=44  Identities=39%  Similarity=0.671  Sum_probs=39.1

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3678899999999987  9999999999999999999999999874

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.29  E-value=1e-12  Score=74.66  Aligned_cols=42  Identities=31%  Similarity=0.589  Sum_probs=37.3

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567899999999977  999999999999999999999999884

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1e-12  Score=76.19  Aligned_cols=44  Identities=39%  Similarity=0.653  Sum_probs=39.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3678899999999987  9999999999999999999999999874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=2.6e-12  Score=74.10  Aligned_cols=43  Identities=26%  Similarity=0.441  Sum_probs=38.7

Q ss_pred             HhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCc
Q psy8183          14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCY   58 (223)
Q Consensus        14 ~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~   58 (223)
                      .+|+++++|.|++  |++.|.....|..|+++|+++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3688999999987  999999999999999999999999999986

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=74.13  Aligned_cols=42  Identities=26%  Similarity=0.538  Sum_probs=37.0

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567899999999987  999999999999999999999998874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=75.55  Aligned_cols=44  Identities=41%  Similarity=0.660  Sum_probs=39.1

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999987  9999999999999999999999999874

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.5e-12  Score=75.46  Aligned_cols=44  Identities=39%  Similarity=0.730  Sum_probs=39.1

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3678899999999987  9999999999999999999999999874

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.27  E-value=1.1e-12  Score=76.16  Aligned_cols=44  Identities=27%  Similarity=0.350  Sum_probs=32.1

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCC---SSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            556677777777777777777777777777777776   77777766

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.27  E-value=6.7e-13  Score=77.01  Aligned_cols=44  Identities=27%  Similarity=0.459  Sum_probs=27.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSC---CCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            455566666666666666666666666666666655   56666655

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=75.77  Aligned_cols=44  Identities=36%  Similarity=0.616  Sum_probs=38.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3678899999999977  9999999999999999999999998864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.8e-12  Score=75.16  Aligned_cols=43  Identities=42%  Similarity=0.663  Sum_probs=37.7

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      +++|+++++|.|++  |++.|.....|..|+++|+++++|.|++|
T Consensus         4 ~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46788899999977  99999999999999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.27  E-value=1.2e-12  Score=75.95  Aligned_cols=44  Identities=23%  Similarity=0.358  Sum_probs=29.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.....|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSS---SCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCC---CCcCCCCC
Confidence            455666666666666666666666666666666666   66666665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=9.2e-13  Score=76.42  Aligned_cols=44  Identities=20%  Similarity=0.297  Sum_probs=29.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCS---SCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            455666666666666666666666666666666666   66666665

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=76.06  Aligned_cols=44  Identities=30%  Similarity=0.432  Sum_probs=29.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCC---CCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCC---CCCCCCCC
Confidence            455666666666666666666666666666666666   66666665

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=76.23  Aligned_cols=43  Identities=35%  Similarity=0.583  Sum_probs=36.2

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      +++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46788888888877  88888888888888888888888888877

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.6e-12  Score=75.40  Aligned_cols=44  Identities=39%  Similarity=0.631  Sum_probs=38.4

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            3678899999999987  9999999999999999999999998864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.5e-12  Score=75.50  Aligned_cols=44  Identities=43%  Similarity=0.697  Sum_probs=38.5

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3678899999999987  9999999999999999999999998874

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.7e-12  Score=75.23  Aligned_cols=44  Identities=34%  Similarity=0.554  Sum_probs=39.6

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3678899999999988  9999999999999999999999999874

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.7e-12  Score=75.22  Aligned_cols=44  Identities=36%  Similarity=0.610  Sum_probs=38.5

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3677899999999987  9999999999999999999999998874

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.4e-12  Score=75.66  Aligned_cols=43  Identities=30%  Similarity=0.616  Sum_probs=37.2

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            677888889999977  9999999999999988898888888864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=75.73  Aligned_cols=43  Identities=42%  Similarity=0.678  Sum_probs=36.7

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      |+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            677888888888877  8888888888888888888888888864

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=7.2e-13  Score=76.85  Aligned_cols=44  Identities=25%  Similarity=0.378  Sum_probs=29.5

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.....|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGK---KPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSC---CCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCC---CCCCCCCC
Confidence            555666666666766766666666666666666666   66666665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8e-13  Score=76.61  Aligned_cols=44  Identities=20%  Similarity=0.292  Sum_probs=29.0

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGE---NPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTS---CCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            455666666666666666666666666666666665   66666665

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=9e-13  Score=76.40  Aligned_cols=44  Identities=25%  Similarity=0.356  Sum_probs=28.2

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGE---RHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCC---SSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCC---CCCCCCCC
Confidence            455566666666666666666666666666666665   66666655

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.26  E-value=3.8e-12  Score=81.08  Aligned_cols=57  Identities=23%  Similarity=0.542  Sum_probs=52.5

Q ss_pred             hCCCCCccCCc--CcccccCchhHHhhhhhhcCCCCCCcccCCc--cCCccCChHHHHHHHhhh
Q psy8183          46 HQTDKPYKCNS--CYKCFVDETALLEHIPKHKDSKHLKTHICQY--CGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        46 h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h  105 (223)
                      ....++|.|..  |++.|.....|.+|++.|.++   ++|.|.+  |++.|.+...|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGE---KPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSS---CSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCC---CCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45678999998  999999999999999999998   9999975  999999999999999875

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=9.5e-13  Score=75.59  Aligned_cols=44  Identities=27%  Similarity=0.436  Sum_probs=30.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEE---KPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSS---CSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            345666677777777777777777777777777666   66777665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.6e-12  Score=75.30  Aligned_cols=44  Identities=41%  Similarity=0.699  Sum_probs=38.5

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3678899999999987  9999999999999999999999998864

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.2e-12  Score=75.90  Aligned_cols=44  Identities=25%  Similarity=0.377  Sum_probs=30.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTC---CCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            455666677777777777777777777777777666   66777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.2e-12  Score=75.92  Aligned_cols=44  Identities=25%  Similarity=0.358  Sum_probs=29.7

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSS---SCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCC---CCCCCCCC
Confidence            555666666677777777777777777776666666   66666665

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=75.22  Aligned_cols=44  Identities=36%  Similarity=0.664  Sum_probs=37.1

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3677888888888877  8888888888888888888888888864

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-12  Score=75.95  Aligned_cols=44  Identities=25%  Similarity=0.431  Sum_probs=30.0

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCC---CTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            556666666777777777777777777777766666   66666665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.5e-12  Score=75.57  Aligned_cols=44  Identities=27%  Similarity=0.342  Sum_probs=28.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGE---KTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSC---CCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCC---CCCCCCCC
Confidence            445566666666666666666666666666666665   66666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.4e-12  Score=75.63  Aligned_cols=44  Identities=25%  Similarity=0.443  Sum_probs=31.2

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGE---KPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCS---CSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCC---CCCCCCCC
Confidence            456667777777777777777777777777777766   67777665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.26  E-value=1.2e-12  Score=75.93  Aligned_cols=44  Identities=27%  Similarity=0.387  Sum_probs=29.1

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGE---KPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCC---CCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCC---CCCCCCCC
Confidence            555666666666666666666666666666666666   66666655

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.4e-12  Score=75.56  Aligned_cols=44  Identities=45%  Similarity=0.728  Sum_probs=36.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3677888888888877  8888888888888888888888888864

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.4e-12  Score=75.57  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=30.0

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQ---KPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCC---CCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            556666667777777777777777777777766666   66666665

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2e-12  Score=74.93  Aligned_cols=42  Identities=31%  Similarity=0.690  Sum_probs=37.3

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      |+++|+++++|.|++  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            678899999999977  999999999999999999999999886

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.6e-12  Score=75.26  Aligned_cols=44  Identities=41%  Similarity=0.673  Sum_probs=37.9

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            3678889999999977  9999999999999998998889988864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=74.77  Aligned_cols=43  Identities=30%  Similarity=0.563  Sum_probs=38.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778899999999987  999999999999999999999999885

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.3e-12  Score=73.86  Aligned_cols=43  Identities=37%  Similarity=0.655  Sum_probs=38.4

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4678899999999987  999999999999999999999999885

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=75.57  Aligned_cols=43  Identities=42%  Similarity=0.688  Sum_probs=36.1

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            677888888888877  8888888888888888888888888864

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=75.87  Aligned_cols=44  Identities=30%  Similarity=0.452  Sum_probs=32.5

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGV---KPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCC---CSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            566677777777777777777777777777777776   77777766

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.1e-12  Score=76.01  Aligned_cols=44  Identities=30%  Similarity=0.422  Sum_probs=29.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCC---CCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCC---CCCCCCCC
Confidence            555666666677777777777777777776666666   66666665

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=75.66  Aligned_cols=43  Identities=40%  Similarity=0.663  Sum_probs=35.8

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            567888888888877  8888888888888888888888888864

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.3e-12  Score=75.69  Aligned_cols=44  Identities=27%  Similarity=0.395  Sum_probs=30.5

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTC---CCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            455666777777777777777777777777777666   66777665

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.8e-12  Score=75.06  Aligned_cols=44  Identities=43%  Similarity=0.743  Sum_probs=38.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999977  9999999999999999999999998864

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.25  E-value=1.2e-12  Score=75.85  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=29.8

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGV---KPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSC---CCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            555666666777777777777777777777666666   66666665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=75.89  Aligned_cols=44  Identities=30%  Similarity=0.463  Sum_probs=28.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSS---SCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCC---CCCCCCCC
Confidence            455566666666666666666666666666666665   66666655

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.2e-12  Score=74.75  Aligned_cols=43  Identities=35%  Similarity=0.637  Sum_probs=38.5

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4678899999999987  999999999999999999999999886

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.5e-12  Score=75.44  Aligned_cols=44  Identities=25%  Similarity=0.378  Sum_probs=28.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAE---KPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCC---CSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            455566666666666666666666666666666665   66666655

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.8e-12  Score=75.16  Aligned_cols=44  Identities=39%  Similarity=0.711  Sum_probs=36.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.+...|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3677888888888877  8888888888888888888888888863

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=75.90  Aligned_cols=44  Identities=27%  Similarity=0.403  Sum_probs=30.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCC---CCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            455666677777777777777777777777777666   66777665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.7e-12  Score=75.23  Aligned_cols=44  Identities=25%  Similarity=0.353  Sum_probs=29.7

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.....|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCC---SCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCC---CCCCCCCC
Confidence            555666666677777777777767777776666666   66666665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.5e-12  Score=75.45  Aligned_cols=44  Identities=30%  Similarity=0.449  Sum_probs=29.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.....|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGE---KPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTC---SCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCC---CCCCCCCC
Confidence            455666666666666666666666666666666665   66666665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=75.85  Aligned_cols=44  Identities=23%  Similarity=0.415  Sum_probs=28.2

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTS---CCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCC---CCCCCCCC
Confidence            455566666666666666666666666666666665   66666655

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=75.90  Aligned_cols=44  Identities=27%  Similarity=0.324  Sum_probs=26.5

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.....|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCC---SCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            445556666666666666666666666666666655   55666555

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.7e-12  Score=75.25  Aligned_cols=44  Identities=43%  Similarity=0.694  Sum_probs=37.3

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3677888888999977  9999998899999988888888888864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.9e-12  Score=75.05  Aligned_cols=43  Identities=44%  Similarity=0.661  Sum_probs=36.6

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      |+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            677888888888877  8888888888888888888888888864

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.25  E-value=1.5e-12  Score=75.41  Aligned_cols=44  Identities=27%  Similarity=0.408  Sum_probs=29.7

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGE---KPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSC---CCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCC---CCCCCCCC
Confidence            555666666777777777777777777777666666   66666665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=9e-13  Score=76.47  Aligned_cols=44  Identities=18%  Similarity=0.239  Sum_probs=28.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCS---CCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            455666666666666666666666666666666665   66666655

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.2e-12  Score=75.83  Aligned_cols=44  Identities=25%  Similarity=0.451  Sum_probs=27.1

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCS---SCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCC---CCCCCCCC
Confidence            455566666666666666666666666666666655   56666555

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=4.7e-12  Score=74.10  Aligned_cols=43  Identities=26%  Similarity=0.482  Sum_probs=35.7

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcc
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYK   59 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~   59 (223)
                      .|.++++|.|++  |++.|.+...|..|+++|+++++|.|++|++
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            367788888877  8888888888888888888888888888875

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.6e-12  Score=73.72  Aligned_cols=43  Identities=26%  Similarity=0.550  Sum_probs=37.9

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3678899999999987  999999999999999999999999884

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=75.57  Aligned_cols=44  Identities=25%  Similarity=0.398  Sum_probs=29.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQ---RPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSC---CCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            455666666777777777777777777777666666   66666665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.6e-12  Score=75.33  Aligned_cols=44  Identities=25%  Similarity=0.393  Sum_probs=29.7

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGE---KPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSC---CSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            555666666677777777777777777776666666   66666665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=75.43  Aligned_cols=44  Identities=30%  Similarity=0.408  Sum_probs=29.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGY---RPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCC---CSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCC---CCCCCCCC
Confidence            455666666666666666666666666666666666   66666665

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=4.7e-12  Score=76.08  Aligned_cols=47  Identities=32%  Similarity=0.513  Sum_probs=42.2

Q ss_pred             HhCCCCCccCCcCcccccCchhHHhhhh-hhcCCCCCCcccCCccCCccCC
Q psy8183          45 CHQTDKPYKCNSCYKCFVDETALLEHIP-KHKDSKHLKTHICQYCGKSYTQ   94 (223)
Q Consensus        45 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~k~~~C~~C~~~f~~   94 (223)
                      .|.++++|.|++|++.|.....|.+|++ .|.++   ++|.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~---k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE---RPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCC---CCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCC---CCccCCCCCCCCCC
Confidence            3677899999999999999999999997 88888   89999999999975

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.2e-12  Score=75.85  Aligned_cols=44  Identities=30%  Similarity=0.459  Sum_probs=29.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.....|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGG---KPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSC---CCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCC---CCCCCCCC
Confidence            455666666666666666666666666666666666   66666665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.4e-12  Score=75.60  Aligned_cols=45  Identities=24%  Similarity=0.386  Sum_probs=35.6

Q ss_pred             HHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          41 SHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        41 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      +|+++|+++++|.|++|++.|.....|.+|+++|.++   ++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSC---CSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            3566777888888888888888888888888888877   77888776

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.24  E-value=1.4e-13  Score=85.45  Aligned_cols=54  Identities=19%  Similarity=0.420  Sum_probs=42.9

Q ss_pred             HHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHH
Q psy8183          10 MEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALL   68 (223)
Q Consensus        10 ~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~   68 (223)
                      ..|+++|+++++|.|+.  |++.|.....|.   ++|.++++|.|+.|++.|.....+.
T Consensus         3 ~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            35778888888888877  888888877776   7788888888888888887766543

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.4e-12  Score=75.67  Aligned_cols=44  Identities=27%  Similarity=0.482  Sum_probs=26.0

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.+...|..|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFRE---KSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHST---TSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCC---CCCCCCCC
Confidence            445555566666666666666666666666666555   55666554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.7e-12  Score=75.24  Aligned_cols=44  Identities=27%  Similarity=0.384  Sum_probs=30.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDD---KHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSC---CCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            556666777777777777777777777777777666   66777665

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2e-12  Score=74.10  Aligned_cols=43  Identities=35%  Similarity=0.525  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3677888888888877  888888888888888888888888874

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.23  E-value=3.2e-12  Score=72.49  Aligned_cols=41  Identities=29%  Similarity=0.572  Sum_probs=37.4

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC   54 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C   54 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            567899999999988  99999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.9e-12  Score=75.07  Aligned_cols=44  Identities=25%  Similarity=0.401  Sum_probs=31.8

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGE---KPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCC---CCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            566677777777777777777777777777777766   67777766

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.9e-12  Score=75.05  Aligned_cols=44  Identities=23%  Similarity=0.374  Sum_probs=30.5

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.....|.+|++.|.++   ++|.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGE---KPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCS---SCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCC---CCCCCCCC
Confidence            455666777777777777777777777777777666   66777665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.3e-12  Score=75.77  Aligned_cols=44  Identities=27%  Similarity=0.478  Sum_probs=28.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTS---CCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            455666666666666666666666666666666665   66666654

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.7e-12  Score=75.19  Aligned_cols=44  Identities=23%  Similarity=0.206  Sum_probs=29.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|+.|++.|.....|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGE---KCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCS---CSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            555666666666766776666666666666666666   66666665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.1e-12  Score=74.71  Aligned_cols=46  Identities=37%  Similarity=0.622  Sum_probs=39.6

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSC   57 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C   57 (223)
                      |.++|+++++|.|.++.|++.|.....|..|+++|+++++|+|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4568899999999733499999999999999999999999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.22  E-value=2.5e-12  Score=74.55  Aligned_cols=44  Identities=27%  Similarity=0.378  Sum_probs=30.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTRE---KPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCS---SCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            455666677777777777777777777777777666   66777665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2.1e-12  Score=74.80  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=28.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.....|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQ---KNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCC---SCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            455566666666666666666666666666666665   66666655

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3e-12  Score=73.41  Aligned_cols=43  Identities=19%  Similarity=0.373  Sum_probs=37.5

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4678899999999977  999999999999999999999998884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.2e-12  Score=73.22  Aligned_cols=41  Identities=32%  Similarity=0.621  Sum_probs=36.5

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC   54 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C   54 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            567899999999987  99999999999999999999998887

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.2e-12  Score=74.82  Aligned_cols=44  Identities=32%  Similarity=0.618  Sum_probs=37.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3677888888999977  9999999889999988888888888863

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.7e-12  Score=75.29  Aligned_cols=44  Identities=27%  Similarity=0.425  Sum_probs=31.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|+++++|.|++|++.|.+...|..|++.|.++   ++|.|.+|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGE---KPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSC---CCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCC---CCCCCCCC
Confidence            556677777777777777777777777777777766   67777666

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.5e-12  Score=75.51  Aligned_cols=44  Identities=23%  Similarity=0.326  Sum_probs=32.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGE---RPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSC---CSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCC---CCCCCCCC
Confidence            556677777777777777777777777777777776   77777766

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.4e-12  Score=73.88  Aligned_cols=44  Identities=41%  Similarity=0.663  Sum_probs=38.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3678899999999987  9999999999999999999999998863

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3.1e-12  Score=74.16  Aligned_cols=44  Identities=27%  Similarity=0.409  Sum_probs=37.7

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCC-CCCccCCc
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQT-DKPYKCNS   56 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~-~k~~~C~~   56 (223)
                      .|+++|+++++|.|+.  |++.|.....|..|+++|++ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3678889999999977  99999999999999999988 88888863

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.2e-12  Score=74.78  Aligned_cols=44  Identities=25%  Similarity=0.280  Sum_probs=28.1

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGE---KLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCC---CCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCC---CCCCCCCC
Confidence            345566666666666666666666666666666665   66666655

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3e-12  Score=74.21  Aligned_cols=42  Identities=40%  Similarity=0.730  Sum_probs=34.8

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      |+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788888888877  888888888888888888888888876

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.7e-12  Score=72.86  Aligned_cols=41  Identities=34%  Similarity=0.634  Sum_probs=34.2

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC   54 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C   54 (223)
                      |+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            567788888888877  88888888888888888888888877

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.21  E-value=1.8e-12  Score=77.96  Aligned_cols=49  Identities=22%  Similarity=0.291  Sum_probs=29.9

Q ss_pred             CCccHHHHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCc
Q psy8183           2 DLAGQELTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY   52 (223)
Q Consensus         2 ~f~~~~~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~   52 (223)
                      .|.....|..|+++|+++++|.|..  |++.|.....|..|+++|+++++|
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCC
Confidence            4555555556666666666666655  666666666666666666666554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2e-12  Score=73.29  Aligned_cols=41  Identities=39%  Similarity=0.677  Sum_probs=32.6

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC   54 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C   54 (223)
                      |+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            567788888888876  88888888888888888888888776

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.5e-12  Score=74.16  Aligned_cols=44  Identities=27%  Similarity=0.456  Sum_probs=29.2

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhh-hhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIP-KHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.....|.+|++ .|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~---k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE---KPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTS---CSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCC---CCCCCCCC
Confidence            4556666666666666666666666666666 66665   66666665

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=5.2e-12  Score=72.42  Aligned_cols=42  Identities=19%  Similarity=0.296  Sum_probs=36.6

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      |+++|+++++|.|+.  |++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567888999999977  999999999999999999999998884

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.8e-12  Score=74.27  Aligned_cols=43  Identities=30%  Similarity=0.571  Sum_probs=37.5

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3678899999999977  999999999999999999888888885

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.4e-12  Score=73.96  Aligned_cols=44  Identities=25%  Similarity=0.423  Sum_probs=28.8

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCC---CSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            455666666666666666666666666666666665   66666654

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.9e-12  Score=72.92  Aligned_cols=43  Identities=26%  Similarity=0.495  Sum_probs=37.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      .|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3678889999999977  999999999999999999988888873

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=71.77  Aligned_cols=42  Identities=33%  Similarity=0.539  Sum_probs=36.7

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      +++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            46788999999977  9999999999999999999999998864

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.6e-12  Score=71.53  Aligned_cols=43  Identities=33%  Similarity=0.488  Sum_probs=37.7

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCN   55 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~   55 (223)
                      .|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            3678899999999987  999999999999999999999988773

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=1.9e-11  Score=69.71  Aligned_cols=41  Identities=22%  Similarity=0.432  Sum_probs=35.5

Q ss_pred             HhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        14 ~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      ++|+++++|.|+.  |++.|.....|..|+++|+++++|.|++
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4688899999977  9999999999999999999999998864

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.17  E-value=4.9e-13  Score=82.94  Aligned_cols=54  Identities=19%  Similarity=0.374  Sum_probs=45.4

Q ss_pred             HHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHH
Q psy8183          39 LQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYL   98 (223)
Q Consensus        39 L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l   98 (223)
                      |..|+++|.++++|.|+.|++.|.....|.   +.|.++   ++|.|.+|++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~---k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMT---GTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTT---TEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCC---CCEECCCCCCccccCccc
Confidence            446788899999999999999999888876   778887   899999999999876554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9e-12  Score=71.79  Aligned_cols=42  Identities=36%  Similarity=0.685  Sum_probs=37.2

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      .++|+++++|.|++  |++.|.....|..|+++|+++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            46789999999988  9999999999999999999999999864

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.14  E-value=3.5e-11  Score=74.82  Aligned_cols=41  Identities=34%  Similarity=0.630  Sum_probs=35.6

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHH-HHhCCCCCccCCc
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHS-RCHQTDKPYKCNS   56 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~-~~h~~~k~~~C~~   56 (223)
                      .+|+|||.|.+++|+++|.+..+|.+|+ ++|+++|||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            5789999998777999999999999997 5899999998864

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.13  E-value=7.4e-12  Score=75.18  Aligned_cols=47  Identities=17%  Similarity=0.314  Sum_probs=23.7

Q ss_pred             cccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          31 KAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        31 k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      +.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|.++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   50 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            34444444555555555555555555555555555555555555444

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.13  E-value=1e-11  Score=71.91  Aligned_cols=42  Identities=24%  Similarity=0.392  Sum_probs=23.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGE---KPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTS---CSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCC---CCCCCC
Confidence            444555555555555555555555555555555555   555554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.13  E-value=2.6e-11  Score=70.85  Aligned_cols=42  Identities=26%  Similarity=0.266  Sum_probs=35.0

Q ss_pred             hCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCC
Q psy8183          46 HQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGK   90 (223)
Q Consensus        46 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~   90 (223)
                      |.++++|.|++|++.|.....|.+|+++|.++   ++|.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGE---KPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSC---CCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCC---CCccCCCCCC
Confidence            56678888888888888888888888888887   8888888875

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.3e-11  Score=71.38  Aligned_cols=42  Identities=31%  Similarity=0.524  Sum_probs=23.1

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.....|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGE---KPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTS---SCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCC---CCCCCC
Confidence            444555555555555555555555555555555555   555554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.3e-11  Score=71.42  Aligned_cols=42  Identities=21%  Similarity=0.421  Sum_probs=23.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGE---RPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCC---CCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCC---CCCCCC
Confidence            444555555555555555555555555555555555   555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=71.61  Aligned_cols=42  Identities=29%  Similarity=0.408  Sum_probs=30.3

Q ss_pred             HHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          44 RCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        44 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      ++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGE---KPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSS---CCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCC---CCCCCCCC
Confidence            4566777777777777777777777777777766   67777766

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.2e-11  Score=71.65  Aligned_cols=42  Identities=24%  Similarity=0.443  Sum_probs=20.8

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGE---KPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSS---SCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCC---CCCCCC
Confidence            344444555555555555555555555555555444   444443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.6e-11  Score=71.02  Aligned_cols=42  Identities=29%  Similarity=0.471  Sum_probs=22.3

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGE---KPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCC---CCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCC---CCCCCC
Confidence            344455555555555555555555555555555554   455553

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.6e-11  Score=70.94  Aligned_cols=42  Identities=24%  Similarity=0.460  Sum_probs=22.7

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.+...|..|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGE---NPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSS---CCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCC---CCCCCC
Confidence            444555555555555555555555555555555554   555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.12  E-value=1.4e-11  Score=69.81  Aligned_cols=40  Identities=25%  Similarity=0.507  Sum_probs=23.7

Q ss_pred             HHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          43 SRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        43 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      +++|+++++|.|+.|++.|.+...|.+|+++|.++   ++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C   41 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGE---SGPSS   41 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCC---CSCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCC---CCCCC
Confidence            44555566666666666666666666666666555   55555

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.4e-11  Score=71.27  Aligned_cols=42  Identities=26%  Similarity=0.470  Sum_probs=25.9

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGE---RPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSC---CSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCC---CCCCCC
Confidence            345566666666666666666666666666666655   566654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.4e-11  Score=71.35  Aligned_cols=42  Identities=26%  Similarity=0.422  Sum_probs=26.5

Q ss_pred             HHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          44 RCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        44 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      ++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTRE---KPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHC---CCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            3456666666666666666666666666666665   56666655

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.1e-11  Score=67.95  Aligned_cols=39  Identities=31%  Similarity=0.614  Sum_probs=33.8

Q ss_pred             HhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccC
Q psy8183          14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC   54 (223)
Q Consensus        14 ~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C   54 (223)
                      ++|+++++|.|++  |++.|.....|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4688889999977  99999999999999888888888877

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.5e-11  Score=71.18  Aligned_cols=42  Identities=31%  Similarity=0.501  Sum_probs=23.7

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGE---KPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCS---CCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCC---CCCCCC
Confidence            444555555555555555555555555555555555   555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=71.54  Aligned_cols=42  Identities=21%  Similarity=0.420  Sum_probs=24.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|+++++|.|+.|++.|.+...|..|+++|.++   ++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGE---KPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCC---CCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCC---CCCCCC
Confidence            445555556666666666666666666666655555   555554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=3.6e-11  Score=69.18  Aligned_cols=42  Identities=24%  Similarity=0.401  Sum_probs=31.3

Q ss_pred             HhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccC
Q psy8183          45 CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCG   89 (223)
Q Consensus        45 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~   89 (223)
                      .|+++++|.|+.|++.|.....|.+|+++|.++   ++|.|.+||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~---~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS---VGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCC---CCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCC---CCCCCcCCC
Confidence            466777777777777777777777777777776   777777775

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.8e-11  Score=70.85  Aligned_cols=42  Identities=24%  Similarity=0.433  Sum_probs=21.8

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGE---KPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTC---CCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCC---CCCCCC
Confidence            344455555555555555555555555555555544   455543

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.3e-11  Score=71.37  Aligned_cols=42  Identities=29%  Similarity=0.534  Sum_probs=22.9

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|++.|.++   ++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGE---KPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSC---CCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCC---CCCCCC
Confidence            444555555555555555555555555555555554   555554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.5e-11  Score=71.17  Aligned_cols=42  Identities=21%  Similarity=0.435  Sum_probs=23.1

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGE---KPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSC---CCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCC---CCCCCC
Confidence            444555555555555555555555555555555554   555554

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.8e-11  Score=69.23  Aligned_cols=40  Identities=28%  Similarity=0.521  Sum_probs=24.0

Q ss_pred             HHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          43 SRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        43 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      +++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVK---SGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCC---SSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCC---CCCCC
Confidence            44555666666666666666666666666666655   55554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.4e-11  Score=71.23  Aligned_cols=42  Identities=31%  Similarity=0.502  Sum_probs=21.8

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.....|.+|++.|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGE---KPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCC---SCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCC---CCCCCC
Confidence            344455555555555555555555555555555554   455543

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.8e-11  Score=70.84  Aligned_cols=42  Identities=26%  Similarity=0.354  Sum_probs=23.2

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.....|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGE---KPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSS---CCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCC---CCCCCC
Confidence            444555555555555555555555555555555555   555554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.5e-11  Score=71.12  Aligned_cols=42  Identities=26%  Similarity=0.507  Sum_probs=21.9

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~---~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGE---KPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCC---CCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCC---CCCCCC
Confidence            344455555555555555555555555555555554   455543

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.6e-11  Score=71.03  Aligned_cols=42  Identities=29%  Similarity=0.478  Sum_probs=23.8

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.....|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGE---KPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSC---CSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCC---CCcCCC
Confidence            444555555555555555555555555555555555   555554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.7e-11  Score=70.93  Aligned_cols=42  Identities=31%  Similarity=0.477  Sum_probs=22.8

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|+++++|.|+.|++.|.+...|.+|++.|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGE---KPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCS---CCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCC---CCCCCC
Confidence            444555555555555555555555555555555554   555554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.6e-11  Score=70.98  Aligned_cols=42  Identities=24%  Similarity=0.485  Sum_probs=23.5

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGE---KPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSS---SSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCC---CCCCCC
Confidence            444555555555555555555555555555555555   555554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2e-11  Score=70.59  Aligned_cols=42  Identities=26%  Similarity=0.393  Sum_probs=21.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.+...|.+|+++|.++   ++|.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGE---KPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSS---CCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCC---CCCCCC
Confidence            344455555555555555555555555555555554   455543

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.2e-11  Score=70.48  Aligned_cols=42  Identities=24%  Similarity=0.449  Sum_probs=22.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGE---RSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSC---CSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCC---CCCCCC
Confidence            344455555555555555555555555555555554   555543

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.7e-11  Score=70.88  Aligned_cols=42  Identities=26%  Similarity=0.493  Sum_probs=23.7

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.....|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGE---KPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSC---CSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCC---CCCCCC
Confidence            444555555555555555555555555555555555   555554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.8e-11  Score=70.84  Aligned_cols=42  Identities=29%  Similarity=0.405  Sum_probs=26.7

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcC-CCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKD-SKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+ +   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~---~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGV---KSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCC---TTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCC---CCCCCC
Confidence            45556666666666666666666666666666665 5   566664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-11  Score=71.59  Aligned_cols=42  Identities=29%  Similarity=0.463  Sum_probs=23.2

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|++|++.|.....|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQE---TLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSC---CSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCC---CCCCCC
Confidence            444555555555555555555555555555555555   555553

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.5e-11  Score=71.17  Aligned_cols=42  Identities=26%  Similarity=0.483  Sum_probs=24.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|++|++.|.....|.+|+++|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGE---RHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCC---CBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCC---CCCCCC
Confidence            445555555666666666666666666666655555   555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.5e-11  Score=69.42  Aligned_cols=41  Identities=27%  Similarity=0.452  Sum_probs=21.6

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      |+++|.++++|.|++|++.|.....|..|+++|.++   ++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGE---SGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCS---SSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCC---CCCCC
Confidence            344455555555555555555555555555555554   45554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.9e-11  Score=69.99  Aligned_cols=41  Identities=22%  Similarity=0.466  Sum_probs=26.2

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      |+++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQ---SGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSS---CSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCC---CCCCC
Confidence            455566666666666666666666666666666665   56665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.4e-11  Score=68.73  Aligned_cols=41  Identities=32%  Similarity=0.583  Sum_probs=26.5

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      |+++|.++++|.|+.|++.|.....|.+|+++|.++   ++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGS---GPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCC---SCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCC---CCCCC
Confidence            455566666666666666666666666666666665   56655

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1.9e-11  Score=69.97  Aligned_cols=41  Identities=20%  Similarity=0.480  Sum_probs=24.5

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      |+++|.++++|.|+.|++.|.....|.+|++.|.++   ++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARK---SGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCC---CSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCC---CCCCC
Confidence            445555666666666666666666666666666555   55555

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.8e-11  Score=69.16  Aligned_cols=41  Identities=27%  Similarity=0.546  Sum_probs=20.4

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      |+++|.++++|.|+.|++.|.....|.+|+++|.++   ++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGE---SGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTS---SCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCC---CCCCC
Confidence            344444555555555555555555555555555444   44444

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=2.9e-11  Score=68.44  Aligned_cols=40  Identities=28%  Similarity=0.419  Sum_probs=22.9

Q ss_pred             HHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          43 SRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        43 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      +++|.++++|.|+.|++.|.....|.+|++.|.++   ++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGS---GPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCC---SSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCC---CCCCC
Confidence            44555555566666666666666666665555555   55554

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.8e-11  Score=69.42  Aligned_cols=41  Identities=27%  Similarity=0.512  Sum_probs=24.7

Q ss_pred             HHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          43 SRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        43 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      +++|.++++|.|++|++.|.+...|.+|++.|.++   ++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGE---KPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCS---CCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCC---CCCCCC
Confidence            44555666666666666666666666666666655   556554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=3.9e-11  Score=68.65  Aligned_cols=41  Identities=22%  Similarity=0.400  Sum_probs=20.9

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      |+++|.++++|.|+.|++.|.....|..|+++|.++   ++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAK---SGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCC---CCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCC---CCcCC
Confidence            344455555555555555555555555555555544   44544

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.2e-11  Score=79.56  Aligned_cols=64  Identities=17%  Similarity=0.234  Sum_probs=51.3

Q ss_pred             HHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183           9 TMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus         9 ~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      |..|+++|.+++++.|++  |++.|. ...|..|+ .|.+++++.|+.|++.|. ...|..|+++|.++
T Consensus         5 L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            456777888888888877  888884 88888888 788888888888888776 47788888887765

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.6e-11  Score=68.63  Aligned_cols=35  Identities=37%  Similarity=0.633  Sum_probs=17.5

Q ss_pred             HHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          43 SRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        43 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      +++|.++++|.|+.|++.|.....|.+|++.|.++
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   37 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGS   37 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCC
Confidence            33444455555555555555555555555555444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.04  E-value=3.8e-11  Score=67.91  Aligned_cols=40  Identities=25%  Similarity=0.396  Sum_probs=21.1

Q ss_pred             HHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          43 SRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        43 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      +++|.++++|.|+.|++.|.+...|..|+++|.++   ++|.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~---k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQS---GPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCC---CCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCC---CCCCC
Confidence            34455555555555555555555555555555554   45544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.7e-11  Score=69.41  Aligned_cols=42  Identities=29%  Similarity=0.475  Sum_probs=25.7

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |+++|.++++|.|+.|++.|.....|.+|++.|.++   ++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGK---KPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCC---CCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCC---CCCCCC
Confidence            445566666666666666666666666666666655   556654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=6.2e-11  Score=67.82  Aligned_cols=40  Identities=20%  Similarity=0.351  Sum_probs=20.4

Q ss_pred             HHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          43 SRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        43 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      +++|.++++|.|++|++.|.....|..|+++|.++   ++|.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGE---SGPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTS---CCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCC---CCCCC
Confidence            34444555555555555555555555555555544   44544

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=66.57  Aligned_cols=41  Identities=20%  Similarity=0.482  Sum_probs=21.2

Q ss_pred             hhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccCCCCC
Q psy8183          70 HIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRP  113 (223)
Q Consensus        70 H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  113 (223)
                      |+++|.++   ++|.|.+|++.|.+...|..|+++|.++.+|.|
T Consensus         3 h~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            3 SGSSGSGE---RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCSCSSCC---CSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCcCCCCC---CCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444   455555555555555555555555555555444

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.4e-11  Score=68.41  Aligned_cols=41  Identities=24%  Similarity=0.373  Sum_probs=29.5

Q ss_pred             HHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        42 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      |+++|.++++|.|++|++.|.+...|.+|+++|.++   ++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~---~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRK---SGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCC---CCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCC---CCCCC
Confidence            556677777777777777777777777777777766   66665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.4e-10  Score=67.02  Aligned_cols=39  Identities=18%  Similarity=0.394  Sum_probs=21.8

Q ss_pred             HhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          45 CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        45 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      +|.++++|.|+.|++.|.+...|..|++.|.++   ++|.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGE---KPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSC---CCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCC---CCCCCC
Confidence            455555555555555555555555555555555   555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8.5e-11  Score=68.44  Aligned_cols=43  Identities=21%  Similarity=0.298  Sum_probs=30.7

Q ss_pred             HHHhCCCCCccCC--cCcccccCchhHHhhhhhhcCCCCCCcccCCcc
Q psy8183          43 SRCHQTDKPYKCN--SCYKCFVDETALLEHIPKHKDSKHLKTHICQYC   88 (223)
Q Consensus        43 ~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C   88 (223)
                      .++|+++++|.|.  .|++.|.....|.+|+++|.++   ++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGV---KPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCC---CSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCC---CCCCCCCC
Confidence            3456677777776  6777777777777777777776   67777766

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.99  E-value=2.2e-10  Score=65.15  Aligned_cols=39  Identities=21%  Similarity=0.365  Sum_probs=24.8

Q ss_pred             HhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          45 CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        45 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      +|+++++|.|+.|++.|.....|.+|++.|.++   ++|.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSD---KSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCT---TCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCC---CCccCC
Confidence            455666666666666666666666666666665   666664

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.7e-10  Score=66.51  Aligned_cols=41  Identities=22%  Similarity=0.434  Sum_probs=20.7

Q ss_pred             hhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccCCCCC
Q psy8183          70 HIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKRP  113 (223)
Q Consensus        70 H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  113 (223)
                      |+++|.++   ++|.|.+|++.|.+...|..|+++|.++.+|.|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGE---KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCC---CSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCC---CCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444   455555555555555555555555555444444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.3e-11  Score=79.40  Aligned_cols=67  Identities=19%  Similarity=0.289  Sum_probs=59.1

Q ss_pred             HHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccC
Q psy8183          37 SNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        37 ~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                      ..|..|+++|.+++++.|..|++.| ....|..|+ .+.++   ++|.|..|++.|.+ ..|..|+++|.++.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~---~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGA---RTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHH---CEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCC---CceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            4567788889999999999999999 489999999 88888   99999999998884 89999999987653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=6e-10  Score=61.66  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=29.9

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      .+++++||.|++++|++.|.+...|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            36789999997667999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=4.3e-10  Score=61.98  Aligned_cols=37  Identities=30%  Similarity=0.693  Sum_probs=31.9

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCc
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY   52 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~   52 (223)
                      |+++++|.|.++.|++.|.+...|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6788999998446999999999999999999888876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.95  E-value=5.3e-10  Score=62.05  Aligned_cols=37  Identities=22%  Similarity=0.460  Sum_probs=30.9

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccC
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC   54 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C   54 (223)
                      |+++++|.|++  |++.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            67888889977  99999888888889888888888765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.6e-10  Score=61.89  Aligned_cols=37  Identities=22%  Similarity=0.495  Sum_probs=32.2

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCC
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKP   51 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~   51 (223)
                      +++|+++++|.|+.  |++.|.....|..|+++|+++++
T Consensus         1 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            35789999999987  99999999999999999988764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.8e-10  Score=64.46  Aligned_cols=40  Identities=25%  Similarity=0.358  Sum_probs=20.6

Q ss_pred             hhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcccCCCC
Q psy8183          70 HIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAERSDKR  112 (223)
Q Consensus        70 H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  112 (223)
                      |+++|.++   ++|.|.+|++.|.+...|..|+++|+++.+|.
T Consensus         3 H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            3 SGSSGSGE---KPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCC---CSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCcccCCC---cCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            44445544   55555555555555555555555555544443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=4.5e-11  Score=79.32  Aligned_cols=59  Identities=17%  Similarity=0.328  Sum_probs=47.0

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      .++|+++++|.|++  |++.|.....|..|+++|+++++|+|..|.    ....|..|.+.|.+.
T Consensus        17 ~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           17 NGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             ccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            45688899999977  999999999999999999888889887654    455666777777653

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=66.81  Aligned_cols=40  Identities=25%  Similarity=0.473  Sum_probs=25.5

Q ss_pred             HHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          44 RCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        44 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      ++|.++++|.|.+|++.|.+...|.+|+++|.++   ++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGE---KSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSC---CCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCC---CCCCCC
Confidence            3456666666666666666666666666666665   666664

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=4.1e-10  Score=63.21  Aligned_cols=38  Identities=24%  Similarity=0.366  Sum_probs=24.6

Q ss_pred             HhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccC
Q psy8183          45 CHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHIC   85 (223)
Q Consensus        45 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C   85 (223)
                      +|.++++|.|+.|++.|.....|..|++.|.++   ++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGS---GPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCC---SCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCC---CCcCC
Confidence            456666666666666666666666666666665   56655

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.89  E-value=5.5e-10  Score=61.12  Aligned_cols=36  Identities=33%  Similarity=0.617  Sum_probs=29.2

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      |+++|+++++|.|+.  |++.|.+...|..|+++|.++
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            567888888888877  888888888888888887653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.87  E-value=1.9e-09  Score=57.98  Aligned_cols=35  Identities=29%  Similarity=0.481  Sum_probs=30.0

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKP   51 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~   51 (223)
                      +|+++++|.|..  |++.|.+...|..|+++|+++++
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            478889999977  99999999999999999888764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.84  E-value=2.2e-09  Score=57.82  Aligned_cols=35  Identities=29%  Similarity=0.677  Sum_probs=29.2

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKP   51 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~   51 (223)
                      +|+++++|.|..  |++.|.....|..|+++|+++++
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            478888899977  99999888888989888887764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.78  E-value=4.4e-09  Score=57.55  Aligned_cols=36  Identities=28%  Similarity=0.531  Sum_probs=29.9

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      .|+++++|.|.+++|++.|.....|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478899999974459999999999999999988764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.78  E-value=9e-10  Score=63.90  Aligned_cols=39  Identities=33%  Similarity=0.659  Sum_probs=29.7

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      |..+|+++++|.|+++.|++.|.....|..|+++|++++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            445688888888864458888888888888888887754

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.76  E-value=5.3e-09  Score=57.04  Aligned_cols=35  Identities=20%  Similarity=0.399  Sum_probs=23.8

Q ss_pred             hhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          70 HIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        70 H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      |++.|.++   ++|.|.+|++.|.+...|..|+++|.+
T Consensus         2 H~~~h~~~---k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGI---KPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCS---SSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCC---CCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            55666666   667777777777777777777766654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.75  E-value=4.9e-09  Score=58.01  Aligned_cols=31  Identities=26%  Similarity=0.516  Sum_probs=17.4

Q ss_pred             CCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          47 QTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        47 ~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      +++++|.|+.|++.|.....|..|+++|.++
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   32 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRD   32 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCC
Confidence            4455555555555555555555555555555

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=9.7e-11  Score=77.70  Aligned_cols=58  Identities=12%  Similarity=0.213  Sum_probs=46.1

Q ss_pred             HHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          43 SRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        43 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      .++|.++++|.|++|++.|.....|..|+++|.++   ++|.|..|.    ....|..|.++|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~e---kp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEE---FQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHH---HHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCC---CCcccchhh----hHHHHHhhhccccc
Confidence            45688889999999999999999999999999888   889987654    35556667776654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=9.7e-09  Score=55.52  Aligned_cols=34  Identities=38%  Similarity=0.647  Sum_probs=29.1

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      +|+++++|.|..  |++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCCC
Confidence            588889999977  9999999999999998888764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=5.3e-09  Score=57.07  Aligned_cols=35  Identities=29%  Similarity=0.424  Sum_probs=28.9

Q ss_pred             HhCCCCCCeecccCccccccCCh-HHHHHHHHHhCCCC
Q psy8183          14 RTHTGDKPYKCRHPGCVKAFSQL-SNLQSHSRCHQTDK   50 (223)
Q Consensus        14 ~~H~~~k~~~C~~p~C~k~f~~~-~~L~~H~~~h~~~k   50 (223)
                      ++|+++++|.|+.  |++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCCC
Confidence            4688888888977  99888888 88888888887653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=8.7e-09  Score=55.82  Aligned_cols=35  Identities=37%  Similarity=0.628  Sum_probs=29.5

Q ss_pred             HhCCCCCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        14 ~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      ++|+++++|.|.+  |++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCC--CCchhCCHHHHHHHHHHhccCC
Confidence            3588899999977  9999999999999998887753

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3.7e-09  Score=57.85  Aligned_cols=35  Identities=17%  Similarity=0.282  Sum_probs=29.4

Q ss_pred             HHhCCCCCCeecccCccccccCChHHHHHH-HHHhCCC
Q psy8183          13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSH-SRCHQTD   49 (223)
Q Consensus        13 ~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H-~~~h~~~   49 (223)
                      |++|+++++|.|+.  |++.|.....|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCC--CCcccCCHHHHHHHHHHHccCc
Confidence            35788999999977  99999999999999 8888754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=7.4e-09  Score=56.10  Aligned_cols=35  Identities=17%  Similarity=0.341  Sum_probs=28.5

Q ss_pred             HhCCCCCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        14 ~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      +.|+++++|.|..  |++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCCC
Confidence            3578888888877  8888888888888888887653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.70  E-value=1.3e-08  Score=54.19  Aligned_cols=32  Identities=22%  Similarity=0.414  Sum_probs=25.0

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCCCcc
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYK   53 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~   53 (223)
                      ++|.|++  |++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4678876  8888888888888888888877764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.9e-08  Score=54.35  Aligned_cols=34  Identities=29%  Similarity=0.475  Sum_probs=28.1

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      +|+++++|.|+.  |++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCCC
Confidence            477888888877  8888888888888888887764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1e-08  Score=55.81  Aligned_cols=27  Identities=19%  Similarity=0.621  Sum_probs=14.4

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++|.|.+|++.|.+...|..|+++|++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            8 RSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            455555555555555555555555544

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.64  E-value=1.5e-08  Score=58.90  Aligned_cols=34  Identities=29%  Similarity=0.592  Sum_probs=27.0

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHH-HhCCCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSR-CHQTDK   50 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~-~h~~~k   50 (223)
                      +|+++++|.|.+  |++.|.....|..|++ +|.++.
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCC
Confidence            588888999977  9999999999999988 887764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2.8e-08  Score=53.71  Aligned_cols=34  Identities=32%  Similarity=0.599  Sum_probs=28.2

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      .|+++++|.|++  |++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHHhCCCC
Confidence            467888899977  9999998888988988887753

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.63  E-value=3.4e-08  Score=52.43  Aligned_cols=30  Identities=27%  Similarity=0.510  Sum_probs=18.8

Q ss_pred             cccCCccCCccCChHHHHHHHhhhcccCCC
Q psy8183          82 THICQYCGKSYTQETYLSKHMQKHAERSDK  111 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  111 (223)
                      +|.|.+|++.|.....|..|+++|.++.++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            566666666666666666666666655544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.61  E-value=2.6e-08  Score=61.93  Aligned_cols=36  Identities=17%  Similarity=0.217  Sum_probs=23.5

Q ss_pred             CcccCCc--cCCccCChHHHHHHH-hhhcccCCCCCCcC
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHM-QKHAERSDKRPPII  116 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~~~c  116 (223)
                      |||.|..  |+++|.+.+.|.+|+ ++|++++++.|...
T Consensus        26 KPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           26 RPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             CCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            6677754  777777777777775 46666666666543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.59  E-value=2.4e-08  Score=53.50  Aligned_cols=28  Identities=18%  Similarity=0.425  Sum_probs=15.0

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ++|.|.+|++.|.+...|..|+++|+++
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            4555555555555555555555555443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.57  E-value=4.1e-08  Score=52.64  Aligned_cols=28  Identities=18%  Similarity=0.648  Sum_probs=15.9

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ++|.|.+|++.|.+...|..|+++|+++
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            5555555555555555555555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.55  E-value=3.4e-08  Score=53.73  Aligned_cols=32  Identities=31%  Similarity=0.574  Sum_probs=26.5

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      +.|++||.|+.  |+++|.+.++|.+|+       +|.|..
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcC-------CeECcC
Confidence            56889999977  999999999999997       566653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=1e-07  Score=59.31  Aligned_cols=42  Identities=17%  Similarity=0.219  Sum_probs=33.3

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcc
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYK   59 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~   59 (223)
                      .|.++++|.|.+  |++.|.+...|..|+++|+++. ..|.++..
T Consensus         7 ~~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            7 GLREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             SCCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            467889999987  9999999999999999998764 45555543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=4.3e-08  Score=53.45  Aligned_cols=32  Identities=25%  Similarity=0.461  Sum_probs=20.4

Q ss_pred             hhcCCCCCCcccCCccCCccCChHHHHHH-Hhhhcc
Q psy8183          73 KHKDSKHLKTHICQYCGKSYTQETYLSKH-MQKHAE  107 (223)
Q Consensus        73 ~h~~~~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~  107 (223)
                      .|.++   ++|.|..|++.|.+...|..| +++|.+
T Consensus         3 ~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSG---HLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSS---CEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCC---cCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            45555   666666666666666666666 666543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=9.8e-08  Score=52.56  Aligned_cols=27  Identities=22%  Similarity=0.359  Sum_probs=18.1

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  107 (223)
                      +||.|.+  |++.|.+.+.|.+|+++|++
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            6666664  67777766667677666654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1.1e-07  Score=51.16  Aligned_cols=27  Identities=26%  Similarity=0.485  Sum_probs=16.8

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++|.|.+|++.|.....|..|+++|.+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            566666666666666666666666554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.5e-07  Score=50.63  Aligned_cols=28  Identities=36%  Similarity=0.751  Sum_probs=18.7

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ++|.|.+|++.|.+...|..|+++|.++
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            6666777777777777777776666543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=8.6e-08  Score=51.69  Aligned_cols=27  Identities=22%  Similarity=0.479  Sum_probs=16.6

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++|.|.+|++.|.....|..|+++|.+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            8 LLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            556666666666666666666665543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=8.6e-08  Score=52.05  Aligned_cols=27  Identities=22%  Similarity=0.599  Sum_probs=15.3

Q ss_pred             CcccCCccCCccCCh-HHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQE-TYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~-~~l~~H~~~h~~  107 (223)
                      ++|.|.+|++.|.+. ..|..|+++|.+
T Consensus         8 k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            8 RAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            555555555555555 555555555543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.1e-07  Score=51.32  Aligned_cols=27  Identities=26%  Similarity=0.572  Sum_probs=16.5

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++|.|.+|++.|.+...|..|+++|.+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            8 KPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             CSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            556666666666666666666665543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=1.3e-07  Score=51.60  Aligned_cols=30  Identities=33%  Similarity=0.636  Sum_probs=15.8

Q ss_pred             CcccCC--ccCCccCChHHHHHHHhhhcccCC
Q psy8183          81 KTHICQ--YCGKSYTQETYLSKHMQKHAERSD  110 (223)
Q Consensus        81 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  110 (223)
                      ++|.|.  .|++.|.+...|..|+++|.++.+
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             cceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            455555  255555555555555555554443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=2.1e-07  Score=48.65  Aligned_cols=31  Identities=48%  Similarity=1.019  Sum_probs=22.0

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      +++|.|.++.|++.|.....|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4677776223888888777788887777765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=2.1e-07  Score=50.08  Aligned_cols=27  Identities=30%  Similarity=0.717  Sum_probs=18.0

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++|.|.+|++.|.....|..|+++|.+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            666666666666666666666666654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.39  E-value=3.2e-07  Score=56.98  Aligned_cols=29  Identities=31%  Similarity=0.564  Sum_probs=24.3

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcccC
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                      ++|.|.+|++.|.+...|..|+++|+++.
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            88888888888888888888888888753

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=2.4e-07  Score=47.33  Aligned_cols=30  Identities=40%  Similarity=0.734  Sum_probs=22.9

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      +++|.|..  |++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDY--CGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            46788877  8888888888888888777653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.39  E-value=1.3e-07  Score=54.75  Aligned_cols=32  Identities=31%  Similarity=0.566  Sum_probs=21.6

Q ss_pred             hcCCCCCCcccCCccCCccCChHHHHHHHh-hhccc
Q psy8183          74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQ-KHAER  108 (223)
Q Consensus        74 h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~  108 (223)
                      |.++   ++|.|.+|++.|.+...|..|++ +|.++
T Consensus         2 Ht~~---kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRD---KPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTT---SCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCC---cCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            4455   67777777777777777777777 66654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.35  E-value=3.7e-07  Score=46.29  Aligned_cols=27  Identities=19%  Similarity=0.763  Sum_probs=18.7

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++|.|.+|++.|.....|..|+++|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            356777777777777777777777654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.35  E-value=2.7e-07  Score=47.88  Aligned_cols=31  Identities=35%  Similarity=0.738  Sum_probs=22.0

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      ++|.|+++.|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            4677862238888888888888887777653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.33  E-value=2.7e-07  Score=46.88  Aligned_cols=27  Identities=22%  Similarity=0.466  Sum_probs=17.2

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++|.|.+|++.|.....|..|+++|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            356666666666666666666666654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.33  E-value=4.4e-07  Score=45.98  Aligned_cols=28  Identities=29%  Similarity=0.783  Sum_probs=20.3

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      ++|.|+.  |++.|.....|..|+++|+++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence            4677766  777777777777777777664

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.32  E-value=2.2e-07  Score=50.42  Aligned_cols=24  Identities=21%  Similarity=0.418  Sum_probs=11.9

Q ss_pred             CCCCccCCcCcccccCchhHHhhh
Q psy8183          48 TDKPYKCNSCYKCFVDETALLEHI   71 (223)
Q Consensus        48 ~~k~~~C~~C~~~f~~~~~l~~H~   71 (223)
                      +++||.|+.|++.|.+.+.|.+|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            444555555555555555554444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.32  E-value=3.1e-07  Score=46.65  Aligned_cols=28  Identities=25%  Similarity=0.514  Sum_probs=19.4

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      ++|.|+.  |++.|.....|..|+++|+++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhcCC
Confidence            4677766  777777777777777776654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.32  E-value=1.6e-08  Score=53.35  Aligned_cols=27  Identities=30%  Similarity=0.503  Sum_probs=13.9

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      +|.|+.|++.|.....|.+|+++|.++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccC
Confidence            445555555555555555555555544

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.30  E-value=4.4e-07  Score=45.88  Aligned_cols=28  Identities=32%  Similarity=0.616  Sum_probs=18.3

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3566767777777777777776666543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.28  E-value=5.5e-07  Score=45.01  Aligned_cols=27  Identities=30%  Similarity=0.698  Sum_probs=20.5

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQ   47 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~   47 (223)
                      +++|.|+.  |++.|.....|..|+++|+
T Consensus         1 ek~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSL--CPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCC--cChhhCCHHHHHHHHHHcc
Confidence            46788866  8888888888888877763

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.28  E-value=6.1e-07  Score=45.72  Aligned_cols=27  Identities=26%  Similarity=0.550  Sum_probs=17.3

Q ss_pred             cccCCccCCccCChHHHHHHHhhhccc
Q psy8183          82 THICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      +|.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            466666666666666666666666543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.27  E-value=4.9e-07  Score=45.76  Aligned_cols=28  Identities=29%  Similarity=0.641  Sum_probs=19.4

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ++|.|.+|++.|.....|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3567777777777777777777776653

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.27  E-value=5.1e-07  Score=45.68  Aligned_cols=29  Identities=45%  Similarity=0.826  Sum_probs=21.5

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      ++|.|+.  |++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcCCC
Confidence            4677866  8888888888888887776653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.27  E-value=5.2e-07  Score=46.01  Aligned_cols=28  Identities=32%  Similarity=0.775  Sum_probs=20.1

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ++|.|.+|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5677777777777777777777776643

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.27  E-value=7.9e-08  Score=50.55  Aligned_cols=31  Identities=19%  Similarity=0.352  Sum_probs=18.2

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCCCc
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY   52 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~   52 (223)
                      ++|.|+.  |++.|.....|..|+++|+++++|
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCCCC
Confidence            3556655  666666666666666666655554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.27  E-value=5.7e-07  Score=44.82  Aligned_cols=26  Identities=27%  Similarity=0.586  Sum_probs=17.8

Q ss_pred             cccCCccCCccCChHHHHHHHhhhcc
Q psy8183          82 THICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      +|.|.+|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46677777777777777777776654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.27  E-value=1.7e-07  Score=54.00  Aligned_cols=37  Identities=27%  Similarity=0.475  Sum_probs=24.7

Q ss_pred             hhhhhhcCCCCCCcccCC--ccCCccCChHHHHHHHhhhccc
Q psy8183          69 EHIPKHKDSKHLKTHICQ--YCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        69 ~H~~~h~~~~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      .|+..|.++   ++|.|.  .|++.|.+.+.|..|+++|.++
T Consensus         8 ~~~~~H~~~---k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPD---KTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETT---TEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCC---CCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            344556666   777774  5777777777777777777653

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.27  E-value=1.3e-06  Score=53.84  Aligned_cols=52  Identities=31%  Similarity=0.529  Sum_probs=34.0

Q ss_pred             eecccCccccccCChHHHHHHHH-HhCCCC------CccCC--cCcccccCchhHHhhhhh
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSR-CHQTDK------PYKCN--SCYKCFVDETALLEHIPK   73 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~-~h~~~k------~~~C~--~C~~~f~~~~~l~~H~~~   73 (223)
                      |.|.|.+|++.|.+...|..|+. .|.+.+      .|.|.  -|++.+.....|..|++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            56888888888888888888874 676554      45554  355555555555555543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=4.7e-07  Score=45.26  Aligned_cols=25  Identities=24%  Similarity=0.566  Sum_probs=18.9

Q ss_pred             CcccCCccCCccCChHHHHHHHhhh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      ++|.|.+|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            6677777777777777777777765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.26  E-value=6.9e-07  Score=45.51  Aligned_cols=29  Identities=28%  Similarity=0.582  Sum_probs=19.3

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      ++|.|..  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCC--CCCccCCHHHHHHHHHHHccCC
Confidence            3566766  7777777777777777666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=4.5e-07  Score=45.68  Aligned_cols=26  Identities=23%  Similarity=0.641  Sum_probs=19.3

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      ++|.|.+|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            56777777777777777777777664

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=4.3e-07  Score=45.52  Aligned_cols=26  Identities=35%  Similarity=0.787  Sum_probs=20.0

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHh
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      +++|.|+.  |++.|.....|..|+++|
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCC--CCcccCCHHHHHHHHHhc
Confidence            46788876  888888888888887766

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.26  E-value=6.3e-07  Score=48.60  Aligned_cols=28  Identities=39%  Similarity=0.825  Sum_probs=18.3

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ++|.|.+  |++.|.+.+.|..|+++|.++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            6666663  777777666677776666543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.25  E-value=5.3e-07  Score=45.41  Aligned_cols=27  Identities=37%  Similarity=0.766  Sum_probs=19.8

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQ   47 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~   47 (223)
                      +++|.|..  |++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSV--CGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSS--SCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHhcC
Confidence            46777766  7777777777777777665

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.23  E-value=5.4e-07  Score=45.55  Aligned_cols=28  Identities=46%  Similarity=0.831  Sum_probs=17.7

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      ++|.|+.  |++.|.....|..|+++|+++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhccC
Confidence            3566655  666666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.22  E-value=8.2e-07  Score=45.92  Aligned_cols=28  Identities=32%  Similarity=0.851  Sum_probs=18.4

Q ss_pred             CcccCC--ccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQ--YCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ++|.|.  .|++.|.+...|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356675  6777777777777777666543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=3.6e-07  Score=45.84  Aligned_cols=25  Identities=20%  Similarity=0.426  Sum_probs=17.7

Q ss_pred             CcccCCccCCccCChHHHHHHHhhh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      ++|.|.+|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5677777777777777777777665

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.7e-07  Score=47.75  Aligned_cols=26  Identities=35%  Similarity=0.733  Sum_probs=16.9

Q ss_pred             cccCCccCCccCChHHHHHHHhhhcc
Q psy8183          82 THICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      +|.|.+|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            56666666666666666666666654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=1.9e-07  Score=47.60  Aligned_cols=28  Identities=46%  Similarity=0.774  Sum_probs=19.4

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      ++|.|+.  |++.|.....|..|+++|+++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3577766  777777777777777776654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=1.9e-07  Score=47.85  Aligned_cols=28  Identities=43%  Similarity=0.880  Sum_probs=19.6

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      ++|.|..  |++.|.....|..|+++|+++
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIH--CQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5677766  777777777777777776654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.18  E-value=1.3e-06  Score=45.42  Aligned_cols=28  Identities=25%  Similarity=0.604  Sum_probs=19.0

Q ss_pred             CcccCC--ccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQ--YCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ++|.|.  .|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            566776  6777777777777777766543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.4e-07  Score=45.96  Aligned_cols=25  Identities=36%  Similarity=0.893  Sum_probs=16.8

Q ss_pred             CcccCCccCCccCChHHHHHHHhhh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      ++|.|.+|++.|.+...|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3566777777777777777776655

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=3e-07  Score=47.08  Aligned_cols=27  Identities=22%  Similarity=0.587  Sum_probs=18.4

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ++|.|.+|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            566777777777777777777766654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.12  E-value=1.2e-06  Score=44.67  Aligned_cols=26  Identities=23%  Similarity=0.627  Sum_probs=15.6

Q ss_pred             cccCCccCCccCChHHHHHH-Hhhhcc
Q psy8183          82 THICQYCGKSYTQETYLSKH-MQKHAE  107 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H-~~~h~~  107 (223)
                      +|.|..|++.|.+...|..| +++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            46666666666666666666 455543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.08  E-value=1.5e-06  Score=43.18  Aligned_cols=26  Identities=38%  Similarity=0.827  Sum_probs=15.3

Q ss_pred             CeecccCccccccCChHHHHHHHHHhCC
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      +|.|..  |++.|.....|..|+++|++
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcCC
Confidence            356655  66666666666666666553

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=1.5e-06  Score=44.32  Aligned_cols=27  Identities=30%  Similarity=0.655  Sum_probs=16.2

Q ss_pred             CeecccCccccccCChHHHHHH-HHHhCCC
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSH-SRCHQTD   49 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H-~~~h~~~   49 (223)
                      +|.|..  |++.|.+...|..| +++|.++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGL--CNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTT--TCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcc--cCcccCChHHHHHHHHHHccCC
Confidence            566655  66666666666666 4555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.05  E-value=2.8e-06  Score=42.81  Aligned_cols=29  Identities=24%  Similarity=0.588  Sum_probs=22.1

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      ++|.|.++.|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            46888733488888888888888888753

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.28  E-value=7.1e-07  Score=44.14  Aligned_cols=25  Identities=52%  Similarity=0.906  Sum_probs=17.0

Q ss_pred             CCeecccCccccccCChHHHHHHHHHh
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      ++|.|+.  |++.|.....|..|+++|
T Consensus         1 kp~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            4567766  777777777777776665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.92  E-value=4e-06  Score=42.22  Aligned_cols=25  Identities=28%  Similarity=0.773  Sum_probs=17.2

Q ss_pred             cccCC--ccCCccCChHHHHHHHhhhc
Q psy8183          82 THICQ--YCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        82 ~~~C~--~C~~~f~~~~~l~~H~~~h~  106 (223)
                      +|.|.  .|++.|...+.|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56677  77777777777777776664

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.91  E-value=2.8e-05  Score=47.80  Aligned_cols=46  Identities=11%  Similarity=0.152  Sum_probs=40.9

Q ss_pred             CCCccHHHHHHHH-HhCCCCC------CeecccCccccccCChHHHHHHHHHh
Q psy8183           1 MDLAGQELTMEIR-RTHTGDK------PYKCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus         1 ~~f~~~~~~~~h~-~~H~~~k------~~~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      +.|.+.+.|..|+ +.|.+.+      .|.|.|.+|++.+.....|..|+++.
T Consensus        11 ~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           11 ESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4699999999998 5898766      89999999999999999999999864

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.05  E-value=0.00036  Score=48.94  Aligned_cols=92  Identities=15%  Similarity=0.285  Sum_probs=58.4

Q ss_pred             ccHHHHHHHHHhCCC-CCCeecccCccccccCChHHHHHHH--HHhCCC-CCccCCc------CcccccCchhHHhhhhh
Q psy8183           4 AGQELTMEIRRTHTG-DKPYKCRHPGCVKAFSQLSNLQSHS--RCHQTD-KPYKCNS------CYKCFVDETALLEHIPK   73 (223)
Q Consensus         4 ~~~~~~~~h~~~H~~-~k~~~C~~p~C~k~f~~~~~L~~H~--~~h~~~-k~~~C~~------C~~~f~~~~~l~~H~~~   73 (223)
                      ..+..+...+..... .+++.|..  |+..|.+...+..|.  +.|... +.|.+..      -++.+....    +...
T Consensus        14 ~~~~~~~~~~~e~~~~~~~~~C~~--C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~   87 (127)
T 1zu1_A           14 VGKDAVNSLIRENSHIFSDTQCKV--CSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEIS   87 (127)
T ss_dssp             CSHHHHHHHHHHTTTTBCSSEETT--TTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCS
T ss_pred             cchHHHhhhhccccccCCCCcCcC--CCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccc
Confidence            344555555554433 46799988  999999999999998  456422 2233311      122222111    1122


Q ss_pred             hcCCCCCCcccCCccCCccCChHHHHHHHhh
Q psy8183          74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        74 h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      ..+.   +.|.|.+|++.|.+...+..|+..
T Consensus        88 ~~~~---~~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           88 DGED---RSKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             SCCC---TTTEETTTTEECSSHHHHHHHHTS
T ss_pred             cCCC---CCeEcCCCCCEeCCHHHHHHHHCC
Confidence            2333   788999999999999999999853

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.67  E-value=0.00033  Score=48.56  Aligned_cols=31  Identities=23%  Similarity=0.397  Sum_probs=22.2

Q ss_pred             HHhCCCCCccCCcCcccccCchhHHhhhhhh
Q psy8183          44 RCHQTDKPYKCNSCYKCFVDETALLEHIPKH   74 (223)
Q Consensus        44 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h   74 (223)
                      ..|+|+++|.|..|++.|.+...|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            3467777777777777777777777777644

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.36  E-value=0.004  Score=45.72  Aligned_cols=83  Identities=22%  Similarity=0.333  Sum_probs=55.3

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHH
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLS   99 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~   99 (223)
                      ....|+..||+..+. ...|..|... -..++..|+.|+..+ .+..|..|+...-..   +...|..|+..+.. ..|.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~---r~~~C~~C~~~~~~-~~l~  153 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHILKDCPR---RQVSCDNCAASMAF-EDKE  153 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHHHTCTT---CEEECTTTCCEEEG-GGHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhhhhCCC---CCeECCCCCCccCH-HHHH
Confidence            446776667887765 4567777642 234567788888777 456677887654444   67788888887754 5678


Q ss_pred             HHHhhhcccC
Q psy8183         100 KHMQKHAERS  109 (223)
Q Consensus       100 ~H~~~h~~~~  109 (223)
                      .|..++.++.
T Consensus       154 ~H~~~~~~~~  163 (170)
T 3hcs_A          154 IHDQNCPLAL  163 (170)
T ss_dssp             HHHTTCCC--
T ss_pred             hHHHhCcChh
Confidence            8887776543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.25  E-value=0.00098  Score=46.19  Aligned_cols=30  Identities=23%  Similarity=0.533  Sum_probs=26.8

Q ss_pred             hhhcCCCCCCcccCCccCCccCChHHHHHHHhh
Q psy8183          72 PKHKDSKHLKTHICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        72 ~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      ..|.|+   ++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tGe---kpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGG---GLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGG---GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCC---cceEcccCcchhCCHHHHHHHHhh
Confidence            456777   999999999999999999999876

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.89  E-value=0.0058  Score=34.25  Aligned_cols=25  Identities=24%  Similarity=0.437  Sum_probs=22.1

Q ss_pred             CcccCCccCCccCChHHHHHHHhhh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      ..|.|+.|+..|.....|+.|++..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5689999999999999999999854

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.62  E-value=0.022  Score=31.93  Aligned_cols=23  Identities=22%  Similarity=0.377  Sum_probs=20.2

Q ss_pred             CCeecccCccccccCChHHHHHHHH
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSR   44 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~   44 (223)
                      .+|.|+.  |+..|.....|+.||+
T Consensus        11 ~~~~CPr--Cn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPR--CNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTT--TCCCCSSHHHHHHHHH
T ss_pred             CceeCCc--ccccccchHHHHhhhh
Confidence            5689966  9999999999999988

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.05  E-value=0.095  Score=27.36  Aligned_cols=25  Identities=32%  Similarity=0.413  Sum_probs=18.8

Q ss_pred             cccCCccCCccCChHHHHHHHhhhc
Q psy8183          82 THICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      .|.|++|-+.|.....|..|....+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            4778888888888888888876544

>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}

Probab=90.24  E-value=0.09  Score=33.83  Aligned_cols=23  Identities=30%  Similarity=0.798  Sum_probs=17.8

Q ss_pred             ecccCccccccCChHHHHHHHHH
Q psy8183          23 KCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        23 ~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      .|.||||++.|.+...+.+|..+
T Consensus        14 ~CkWPGCe~~~ed~~~FlkHL~~   36 (93)
T 4i1l_A           14 VCKWPGCEKVFEEPEEFLKHCQA   36 (93)
T ss_dssp             ----CCSTTTTHHHHHHHHHHHH
T ss_pred             cccCCCCCCcccCHHHHHHHhhc
Confidence            69999999999999999999875

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=89.69  E-value=0.44  Score=34.54  Aligned_cols=65  Identities=14%  Similarity=0.174  Sum_probs=48.3

Q ss_pred             HHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhhcCC
Q psy8183           8 LTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus         8 ~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      .+..|.. .=.-++..|+  +|+..+ .+..|..|....-..+.-.|..|+..+.. ..|..|...+.|.
T Consensus        98 ~l~~H~~-~C~~~~v~C~--~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~  162 (170)
T 3hcs_A           98 HLEDHQA-HCEFALMDCP--QCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLA  162 (170)
T ss_dssp             GHHHHHT-TCTTSEEECT--TTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC-
T ss_pred             HHHHHHh-cCCceeeECC--CCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcCh
Confidence            3455653 2234677895  599988 57779999987777788899999988754 6678999888876

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=88.33  E-value=0.3  Score=25.42  Aligned_cols=22  Identities=23%  Similarity=0.594  Sum_probs=11.0

Q ss_pred             ccCCcCcccccCchhHHhhhhh
Q psy8183          52 YKCNSCYKCFVDETALLEHIPK   73 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~   73 (223)
                      |.|++|-+.|.+...|..|...
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHHh
Confidence            4455555555555555555433

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=87.83  E-value=0.16  Score=31.84  Aligned_cols=38  Identities=21%  Similarity=0.620  Sum_probs=16.8

Q ss_pred             ccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccC
Q psy8183          52 YKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYT   93 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~   93 (223)
                      |.|+.||..+. +..+..|.....+.   ..|.|-.|++.|.
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~---~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNC---ECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTC---CEEEETTTTEEEE
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCC---CcEEecccCCeeC
Confidence            44555554332 33444444433332   3345555555554

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.99  E-value=0.33  Score=31.14  Aligned_cols=26  Identities=27%  Similarity=0.663  Sum_probs=20.6

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcccC
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                      .-..|-+||+.|.   .|.+|+.++++..
T Consensus        20 d~iiClecGK~fK---~LkRHL~~~hglt   45 (87)
T 2jsp_A           20 DHIVCLECGGSFK---SLKRHLTTHHSMT   45 (87)
T ss_dssp             SCEECTBTCCEES---BHHHHHHHTTCSC
T ss_pred             CceEecccchhhH---HHHHHHHHccCCC
Confidence            4468999999999   4779999976543

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.79  E-value=0.56  Score=23.75  Aligned_cols=22  Identities=32%  Similarity=0.783  Sum_probs=15.8

Q ss_pred             cCCccCCccCChHHHHHHHhhh
Q psy8183          84 ICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        84 ~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      .|..|.+.|+...+|.+|++.-
T Consensus        11 hcrfckkkysdvknlikhire~   32 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            4777777777777777777653

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=85.31  E-value=0.24  Score=27.79  Aligned_cols=12  Identities=33%  Similarity=0.678  Sum_probs=6.7

Q ss_pred             CccCCcCccccc
Q psy8183          51 PYKCNSCYKCFV   62 (223)
Q Consensus        51 ~~~C~~C~~~f~   62 (223)
                      .|+|.+||+.|.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            356666665553

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.31  E-value=0.57  Score=23.72  Aligned_cols=22  Identities=41%  Similarity=0.748  Sum_probs=19.8

Q ss_pred             eecccCccccccCChHHHHHHHHH
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      -.|..  |.+.|++..+|..|++.
T Consensus        10 qhcrf--ckkkysdvknlikhire   31 (37)
T 2elu_A           10 QHCRF--CKKKYSDVKNLIKHIRD   31 (37)
T ss_dssp             CEETT--TTEECSSHHHHHHHHHH
T ss_pred             HHHHH--HHHHHHHHHHHHHHHHH
Confidence            46988  99999999999999985

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=85.23  E-value=0.3  Score=30.64  Aligned_cols=48  Identities=17%  Similarity=0.339  Sum_probs=36.6

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhh
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHI   71 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~   71 (223)
                      -.|.|+.  |+..++ +..|..|...-.+-..|.|-.|++.|.. ..++.|-
T Consensus         9 V~F~C~~--Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A            9 VFFTCNA--CGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             CEEEESS--SCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             eEEEcCC--CCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            3489977  998877 5679999876666567999999999985 4455553

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=85.18  E-value=1.6  Score=22.81  Aligned_cols=25  Identities=16%  Similarity=0.327  Sum_probs=18.4

Q ss_pred             CCCeecccCccccccCChHHHHHHHHH
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      ...+.|..  |+..|.....+..|.+.
T Consensus         6 ~~~~~C~~--C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCST--CDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETT--TTEECSSHHHHHHHHHH
T ss_pred             cCcCeecc--ccceehhhHHHhhhhee
Confidence            34577877  88888888888888664

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=84.47  E-value=0.6  Score=24.44  Aligned_cols=24  Identities=21%  Similarity=0.304  Sum_probs=18.9

Q ss_pred             CcccCCccCCccCChHHHHHHHhh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      ..+.|..|+-+|.....+..|.+.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            567788888888888888888764

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=84.47  E-value=0.65  Score=25.85  Aligned_cols=12  Identities=50%  Similarity=1.456  Sum_probs=6.1

Q ss_pred             ccCCcCcccccC
Q psy8183          52 YKCNSCYKCFVD   63 (223)
Q Consensus        52 ~~C~~C~~~f~~   63 (223)
                      |.|..||+.|..
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            555556555543

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=83.20  E-value=2.9  Score=24.01  Aligned_cols=46  Identities=22%  Similarity=0.397  Sum_probs=29.3

Q ss_pred             cCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCC-ccCChHHHHHHHhh
Q psy8183          53 KCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGK-SYTQETYLSKHMQK  104 (223)
Q Consensus        53 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~-~f~~~~~l~~H~~~  104 (223)
                      .|++|.........|..|.......      +|++|-. ...+.+.|..|.++
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g------qCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING------QCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT------BCTTTCCBCCSSHHHHHHHHTT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC------CCCcccCcCCcCHHHHHHHHHH
Confidence            5777777666777777777666543      4666642 44566777777654

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=82.68  E-value=0.84  Score=30.28  Aligned_cols=12  Identities=33%  Similarity=0.844  Sum_probs=7.4

Q ss_pred             CcccCCccCCcc
Q psy8183          81 KTHICQYCGKSY   92 (223)
Q Consensus        81 k~~~C~~C~~~f   92 (223)
                      .+|+|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            456666666666

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=82.54  E-value=1.2  Score=29.30  Aligned_cols=22  Identities=23%  Similarity=0.696  Sum_probs=11.3

Q ss_pred             CccCC---cCcccccCchhHHhhhh
Q psy8183          51 PYKCN---SCYKCFVDETALLEHIP   72 (223)
Q Consensus        51 ~~~C~---~C~~~f~~~~~l~~H~~   72 (223)
                      -|.|.   -|.++|.+...|+.|+.
T Consensus        58 if~C~~~~~CkrtyLs~rdlqaHI~   82 (101)
T 3vk6_A           58 LFMCSIVQGCKRTYLSQRDLQAHIN   82 (101)
T ss_dssp             CCCCCCCCCCCCCCSSHHHHHHHHH
T ss_pred             EEECCCCCCHHHHhcCHHHHHHHHH
Confidence            45554   25555555555555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	223
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.004
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-07
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	8e-07
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	9e-07
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	1e-06
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	6e-04
d2glia4	31	g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (113), Expect = 1e-08
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 22 YKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKC 54
          + C  P C K+F+   +L+ H + H   + Y C
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 6e-08
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK 50
          RTH+G+KPY+C    C   F+Q   ++ H     T+ 
Sbjct: 1  RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTEN 35

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 1e-07
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKH 74
          DK Y C+   C K+F+  S    H   H   +PY C  C K F  +  L+ H+  H
Sbjct: 1  DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 5e-06
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 49  DKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKH 105
           DK Y C  C K F  ++    H+  H   +      C  CGK +  + +L  HM+ H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG---CGVCGKKFKMKHHLVGHMKIH 53

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (104), Expect = 2e-07
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY 52
          RTHTG+KPY C H  C K F Q   L  H + +  D  +
Sbjct: 1  RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRY-HDPNF 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (73), Expect = 0.004
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 44 RCHQTDKPYKCNSCYKCFVDETALLEHIPKHKDSK 78
          R H  +KPY C+ C K F  +  L  H  ++ D  
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (103), Expect = 3e-07
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 17 TGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQT-DKPYKCN 55
          +  KPY C+   C K FS+  +L  H +   T ++P+KC 
Sbjct: 1  SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.004
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 8  LTMEIRRTHTGDKPYKC 24
          L   I++ HT ++P+KC
Sbjct: 21 LNGHIKQVHTSERPHKC 37

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (102), Expect = 4e-07
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 19 DKPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          D+PY C HPGC KAF +  +L  H + H
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (100), Expect = 7e-07
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          H+G+KPY C    C KAFS+ S L  H R H
Sbjct: 2  HSGEKPYGCVE--CGKAFSRSSILVQHQRVH 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 8e-07
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          KP+KC   GC K++S+L NL++H R H
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.9 bits (99), Expect = 9e-07
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          +PY C    C + FS+ ++L  H R H
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 1e-06
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          KP++C   GC K FS   NL++H R H
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 2e-06
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          +PY C   GC K F+Q +NL+SH   H
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 2e-06
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          +P+ C    C K F++   LQ H R H
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          R  TG KP++C    C ++FS+  +L  H + H
Sbjct: 4  RGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 42 HSRCHQTDKPYKCNSCYKCFVDETALLEHIPKH 74
           +R     KP++C  C + F     L  H  +H
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (89), Expect = 3e-05
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 9  TMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK 50
          +++       DK ++C  PGC K F +  N++SH + H  D+
Sbjct: 6  SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 4e-05
 Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 2/34 (5%)

Query: 13 RRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH 46
                 + YKC   G   +FS  S+L  H R H
Sbjct: 4  EWQQRERRRYKCDECGK--SFSHSSDLSKHRRTH 35

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCH 46
           +G +P+ CR   C+ AF+  +N   H + H
Sbjct: 2  SSGKRPFVCRI--CLSAFTTKANCARHLKVH 30

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.9 bits (81), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          KP++CR   C++ FS+  +L +H R H
Sbjct: 2  KPFQCRI--CMRNFSRSDHLTTHIRTH 26

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.5 bits (80), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          + + C    C +AF++  +L+ H R H
Sbjct: 1  RSFVCEV--CTRAFARQEHLKRHYRSH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 6e-04
 Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCH 46
          KPYKC    C KAFSQ S L +H R H
Sbjct: 1  KPYKCLE--CGKAFSQNSGLINHQRIH 25

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (75), Expect = 0.002
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHS-RCHQTD 49
          KPY C H GC KAFS  S+   H  R H  +
Sbjct: 1  KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 31

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK 50
          K + C    C K F +  +L  H + HQ  K
Sbjct: 1  KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	223
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.68
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.65
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.36
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.34
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.34
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.32
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.3
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.3
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.27
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.26
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.24
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.24
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.24
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.21
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.2
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.17
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.14
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.13
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.13
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.11
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.07
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.07
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.06
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.04
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.03
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.03
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.96
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.94
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.89
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.84
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.84
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.82
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.8
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.7
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.63
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.6
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.59
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.56
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.52
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.5
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.49
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.41
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.38
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.34
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.33
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.3
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	98.19
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.1
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.96
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.96
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.88
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.87
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.81
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.8
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.79
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.77
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.76
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.75
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.7
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.67
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.67
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.59
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.57
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.55
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.53
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.45
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.44
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.42
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.41
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.4
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.27
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.26
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.25
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.24
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.23
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.21
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.17
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.1
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.06
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.99
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.97
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.94
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.91
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.9
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.8
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.73
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.62
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.36
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.31
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.23
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.96
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.95
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.85
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.55
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.24
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.19
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.12
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.97
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.18
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.99
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.88
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.68
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.54
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.1
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.27
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.13
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	91.49
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.43
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.39
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.13
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.26
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	89.81
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.57
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.34
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	88.8
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	88.7
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	88.48
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.59
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	86.77
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.03
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	85.56
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	85.06
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	84.44
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.69
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	82.78
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	81.69
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	81.08
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	80.29

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.9e-17  Score=98.17  Aligned_cols=53  Identities=36%  Similarity=0.659  Sum_probs=41.8

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCCCCccCCcCcccccCchhHHhhhhhh
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNSCYKCFVDETALLEHIPKH   74 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h   74 (223)
                      ||+|.| .  ||+.|.....|..|+++|+++++|.|..|++.|.....|.+|+++|
T Consensus         1 EK~y~C-~--Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-C--CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            577888 4  8888888888888888888888888888888888888888887765

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=3.3e-17  Score=97.17  Aligned_cols=53  Identities=32%  Similarity=0.609  Sum_probs=51.0

Q ss_pred             CCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhh
Q psy8183          49 DKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        49 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      ||+|+|+ ||+.|.....|.+|+++|.++   +||.|.+||+.|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~e---kpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGL---RPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCC---CSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccc---cCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 999999999999999999999   9999999999999999999999886

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.6e-13  Score=73.20  Aligned_cols=35  Identities=29%  Similarity=0.727  Sum_probs=33.2

Q ss_pred             eecccCccccccCChHHHHHHHHHhCCCCCccCCc
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCHQTDKPYKCNS   56 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~~C~~   56 (223)
                      |.|++|+|+++|.+...|++|+++|+++|||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            88999999999999999999999999999999974

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.9e-13  Score=72.88  Aligned_cols=37  Identities=38%  Similarity=0.836  Sum_probs=31.4

Q ss_pred             CCCCeecccCccccccCChHHHHHHHH-HhCCCCCccCCc
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSR-CHQTDKPYKCNS   56 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~-~h~~~k~~~C~~   56 (223)
                      -+|||.|++  ||+.|.+..+|.+|++ +|+++|||+|++
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            478899987  9999999999999976 699999998874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.1e-13  Score=75.25  Aligned_cols=37  Identities=32%  Similarity=0.620  Sum_probs=32.2

Q ss_pred             HHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          11 EIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        11 ~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      .|+++|+++|||.|++  |||+|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            4778899999999977  999999999999999998875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4.5e-13  Score=69.81  Aligned_cols=33  Identities=48%  Similarity=0.874  Sum_probs=30.0

Q ss_pred             hCCCCCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          15 THTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        15 ~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      +|+|+|||.|.+  |+++|.+.+.|..|+++|++|
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            589999999988  999999999999999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=8.2e-13  Score=70.65  Aligned_cols=34  Identities=47%  Similarity=0.813  Sum_probs=30.7

Q ss_pred             HhCCCCCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        14 ~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      |+|+|||||.|.+  |+++|.....|..|+++|+++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            6899999999988  999999999999999999865

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.30  E-value=7.9e-14  Score=79.18  Aligned_cols=42  Identities=31%  Similarity=0.623  Sum_probs=35.9

Q ss_pred             HHHHHHHhCCCCCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183           8 LTMEIRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus         8 ~~~~h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      ++.+|+. |+|++||.|.+++|++.|.+.++|..|+++|+++|
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3455664 99999999998899999999999999999999875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.1e-12  Score=67.42  Aligned_cols=31  Identities=35%  Similarity=0.738  Sum_probs=29.1

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      |||.|++|+|++.|.+.++|.+|+++|+++|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899999999999999999999999999985

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=6.8e-13  Score=71.48  Aligned_cols=35  Identities=34%  Similarity=0.662  Sum_probs=29.3

Q ss_pred             HHHhCCCCCCeecccCccccccCChHHHHHHHHHhCC
Q psy8183          12 IRRTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        12 h~~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      |.|+|+|||||.|++  |++.|.++.+|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            467888888888877  88888888888888888853

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.2e-12  Score=71.00  Aligned_cols=37  Identities=27%  Similarity=0.541  Sum_probs=26.5

Q ss_pred             hhhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          69 EHIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        69 ~H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      +|+++|.++   |||.|.+||++|.+.++|.+|+++|+++
T Consensus         2 rH~~~Ht~e---kpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRER---RRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCS---CSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCC---CCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            466677776   7777777777777777777777777654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.2e-12  Score=65.52  Aligned_cols=30  Identities=47%  Similarity=0.922  Sum_probs=28.1

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      |||.|++|||+++|.+.++|++|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            689999999999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.8e-12  Score=65.95  Aligned_cols=30  Identities=47%  Similarity=0.836  Sum_probs=28.3

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      |||.|++++|+++|.+.++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            689999999999999999999999999885

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=4.2e-12  Score=66.95  Aligned_cols=32  Identities=31%  Similarity=0.770  Sum_probs=28.5

Q ss_pred             CCCCCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          16 HTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        16 H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      |+|||||+|++  |++.|.+..+|.+|+++|+++
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCCc
Confidence            78999999988  999999999999999998765

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.9e-12  Score=67.43  Aligned_cols=33  Identities=39%  Similarity=0.774  Sum_probs=28.2

Q ss_pred             HhCCCCCCeecccCccccccCChHHHHHHHHHhCC
Q psy8183          14 RTHTGDKPYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        14 ~~H~~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      |+|+|||||.|++  |++.|.+..+|+.|++.+++
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccccC
Confidence            5799999999988  99999999999999876544

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.4e-12  Score=68.61  Aligned_cols=35  Identities=43%  Similarity=0.759  Sum_probs=20.5

Q ss_pred             CCCccCCcCcccccCchhHHhhhh-hhcCCCCCCcccCC
Q psy8183          49 DKPYKCNSCYKCFVDETALLEHIP-KHKDSKHLKTHICQ   86 (223)
Q Consensus        49 ~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~k~~~C~   86 (223)
                      +|||+|..||+.|.....|.+|++ +|.++   |||.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~e---kpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSE---RPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCC---CCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCC---cCcCCc
Confidence            455666666666666666666654 45555   556554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.17  E-value=8.3e-12  Score=64.32  Aligned_cols=31  Identities=48%  Similarity=1.019  Sum_probs=28.5

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      ||||.|++|||++.|.+..+|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            6899999999999999999999999999753

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=7.4e-12  Score=62.95  Aligned_cols=29  Identities=34%  Similarity=0.751  Sum_probs=27.3

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      |||.|++|||++.|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            68999999999999999999999999975

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.5e-11  Score=63.88  Aligned_cols=32  Identities=28%  Similarity=0.597  Sum_probs=20.6

Q ss_pred             hcCCCCCCcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          74 HKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        74 h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      |+++   |||.|.+||++|.+.+.|..|+++|+++
T Consensus         2 HTge---kpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGE---KPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTC---CCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCC---CCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            5555   6666666666666666666666666653

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=7.5e-12  Score=62.21  Aligned_cols=28  Identities=46%  Similarity=0.879  Sum_probs=26.4

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQ   47 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~   47 (223)
                      |||.|++|||+|.|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899999999999999999999999985

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=1.8e-11  Score=65.73  Aligned_cols=34  Identities=21%  Similarity=0.438  Sum_probs=23.0

Q ss_pred             hhhhhcCCCCCCcccCCccCCccCChHHHHHHHhhhc
Q psy8183          70 HIPKHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        70 H~~~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      |.+.|+++   |||.|.+|+++|.+.+.|..|+++|.
T Consensus         2 h~R~HTge---KPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGI---KPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCS---SSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCc---cCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            45666666   66777777777777777777766664

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.1e-11  Score=64.34  Aligned_cols=32  Identities=25%  Similarity=0.584  Sum_probs=17.1

Q ss_pred             hhcCCCCCCcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          73 KHKDSKHLKTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        73 ~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      +|+++   |||+|.+||++|.+.+.|..|+++|++
T Consensus         2 ~HTge---kPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGE---KPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCC---CCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCC---CCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            44555   555555555555555555555555543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.07  E-value=4.3e-11  Score=60.37  Aligned_cols=28  Identities=18%  Similarity=0.740  Sum_probs=19.7

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      |||.|.+|++.|.+.+.|.+|+++|+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4677777777777777777777777665

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.07  E-value=3.9e-11  Score=60.52  Aligned_cols=29  Identities=31%  Similarity=0.793  Sum_probs=22.0

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      |||.|++  |++.|.+.+.|.+|+++|+|+|
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            5777766  7777777777777777777764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=3.8e-11  Score=59.86  Aligned_cols=28  Identities=39%  Similarity=0.915  Sum_probs=22.7

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      ||||.|++  |+++|.+..+|..|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            67888877  88888888888888888865

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=5.5e-11  Score=59.24  Aligned_cols=27  Identities=22%  Similarity=0.652  Sum_probs=21.6

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      |||+|.+|++.|.+.+.|.+|+++|++
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            778888888888888888888888764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=7.9e-11  Score=61.95  Aligned_cols=27  Identities=19%  Similarity=0.674  Sum_probs=18.6

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      |||+|.+|++.|.+.++|.+|+++|++
T Consensus         6 kPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           6 RPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             ccccCCCCCCcccChHHHHHHccccCC
Confidence            667777777777777777777766654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=7.5e-11  Score=59.36  Aligned_cols=28  Identities=32%  Similarity=0.676  Sum_probs=18.8

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      |||.|.+|++.|.+.+.|.+|+++|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4566666776677666677776666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=8.2e-11  Score=59.21  Aligned_cols=29  Identities=34%  Similarity=0.700  Sum_probs=20.4

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      |||.|.+  |++.|.+.+.|.+|+++|+++|
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            5677766  7777777777777777777664

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.7e-10  Score=61.35  Aligned_cols=29  Identities=24%  Similarity=0.471  Sum_probs=16.2

Q ss_pred             hhcCCCCCCcccCCccCCccCChHHHHHHHhh
Q psy8183          73 KHKDSKHLKTHICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        73 ~h~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      +|+|+   |||.|.+|++.|.+.++|++|++.
T Consensus         2 ~HTge---kP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           2 THSGE---KPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSCC---CSEECTTTCCEESCHHHHHHHHHH
T ss_pred             ccCCC---CCEeCCCCcccccchHHHHHHccc
Confidence            45555   555555555555555555555544

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.9e-10  Score=55.83  Aligned_cols=26  Identities=35%  Similarity=0.645  Sum_probs=20.9

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      |||+|..|||.|.+.+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888774

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.89  E-value=1.3e-10  Score=65.57  Aligned_cols=39  Identities=23%  Similarity=0.506  Sum_probs=25.9

Q ss_pred             hHHhhhhhhcCCCCCCcccCCc--cCCccCChHHHHHHHhhhccc
Q psy8183          66 ALLEHIPKHKDSKHLKTHICQY--CGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        66 ~l~~H~~~h~~~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      .|.+|+. |.++   +||.|.+  |++.|.+.+.|..|+++|+++
T Consensus         6 ~l~~h~~-h~ge---kpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPD---KTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETT---TEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCC---CCeECCcCCCCccccCchHHHhhcccccCC
Confidence            3455553 6666   7777766  777777777777777777664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=9.9e-10  Score=55.49  Aligned_cols=28  Identities=36%  Similarity=0.797  Sum_probs=20.5

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      |||+|.+  |+++|.+.+.|++|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4677776  777777777777777777654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=7e-10  Score=53.79  Aligned_cols=26  Identities=62%  Similarity=0.968  Sum_probs=21.0

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQ   47 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~   47 (223)
                      |||+|.+  |||+|...+.|..|+++|+
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCCC
Confidence            6788877  8888888888888888774

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1e-09  Score=55.53  Aligned_cols=28  Identities=29%  Similarity=0.708  Sum_probs=21.2

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      |||.|.+  |+++|.+.+.|++|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5777866  888888888888888877764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=9.2e-10  Score=58.24  Aligned_cols=32  Identities=34%  Similarity=0.718  Sum_probs=18.9

Q ss_pred             ccCCc--CcccccCchhHHhhhhhhcCCCCCCcccCC
Q psy8183          52 YKCNS--CYKCFVDETALLEHIPKHKDSKHLKTHICQ   86 (223)
Q Consensus        52 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~   86 (223)
                      |.|+.  |++.|.+...|++|+++|+++   |||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htge---kpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDT---RDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTS---CCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCC---CCEeCC
Confidence            45554  666666666666666666665   566554

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=4.9e-09  Score=53.40  Aligned_cols=28  Identities=32%  Similarity=0.851  Sum_probs=17.7

Q ss_pred             CcccCC--ccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQ--YCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      |||.|+  .|+++|.+.++|.+|+++|+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            456664  3666666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=6.6e-09  Score=51.90  Aligned_cols=27  Identities=19%  Similarity=0.643  Sum_probs=20.2

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  107 (223)
                      |||+|.+  |+++|.+.+.|.+|+++|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5677766  77888888888888777764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.8e-08  Score=48.66  Aligned_cols=29  Identities=38%  Similarity=0.881  Sum_probs=26.7

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      |||.|..+||+|.|.+.+.|+.|+++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            68999999999999999999999998664

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.59  E-value=1.8e-08  Score=51.51  Aligned_cols=27  Identities=26%  Similarity=0.615  Sum_probs=19.7

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  107 (223)
                      |||.|.+  |+++|.+.++|++|+++|..
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            6777766  77777777777777777764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.1e-08  Score=50.47  Aligned_cols=26  Identities=35%  Similarity=0.828  Sum_probs=17.7

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~  106 (223)
                      |||.|.+  |+|+|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4667766  7777777777777777663

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.4e-08  Score=45.92  Aligned_cols=22  Identities=41%  Similarity=0.847  Sum_probs=9.2

Q ss_pred             cCCcCcccccCchhHHhhhhhh
Q psy8183          53 KCNSCYKCFVDETALLEHIPKH   74 (223)
Q Consensus        53 ~C~~C~~~f~~~~~l~~H~~~h   74 (223)
                      +|++|++.|++++.|+.|++.|
T Consensus         3 kc~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGC
T ss_pred             ccchhhhHhcchhHHHHHhhcc
Confidence            3444444444444444444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.50  E-value=3e-08  Score=47.16  Aligned_cols=30  Identities=40%  Similarity=0.887  Sum_probs=28.2

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      |||.|.++||.|.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            689999999999999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=4e-08  Score=46.75  Aligned_cols=26  Identities=23%  Similarity=0.640  Sum_probs=22.2

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      +||.|.+||+.|.+.+..++|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            78888888888888888888888874

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.41  E-value=1.1e-07  Score=44.95  Aligned_cols=27  Identities=48%  Similarity=0.942  Sum_probs=25.4

Q ss_pred             CCeecccCccccccCChHHHHHHHHHh
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      .||.|+++||++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            589999999999999999999999987

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.38  E-value=8.7e-08  Score=45.54  Aligned_cols=27  Identities=26%  Similarity=0.583  Sum_probs=17.8

Q ss_pred             CCCccCCcCcccccCchhHHhhhhhhc
Q psy8183          49 DKPYKCNSCYKCFVDETALLEHIPKHK   75 (223)
Q Consensus        49 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   75 (223)
                      +|||.|++||+.|.+.+..++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            456666677766766666666666653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=7.7e-08  Score=46.84  Aligned_cols=30  Identities=50%  Similarity=0.976  Sum_probs=26.5

Q ss_pred             CCeecccCccccccCChHHHHHHH-HHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHS-RCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~-~~h~~~   49 (223)
                      |||.|++|||.|+|+..+.-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            689999999999999999999997 788653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.6e-07  Score=46.32  Aligned_cols=31  Identities=35%  Similarity=0.704  Sum_probs=27.2

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCCCCc
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTDKPY   52 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k~~   52 (223)
                      +...|+.  |||.|.+...|.+|...|+++|||
T Consensus         4 k~~~ce~--cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEI--CGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETT--TTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHH--HHHHHHHHHHHHhhhcccCCCCCC
Confidence            4567987  999999999999999999999987

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.5e-07  Score=43.22  Aligned_cols=26  Identities=46%  Similarity=0.935  Sum_probs=23.8

Q ss_pred             CeecccCccccccCChHHHHHHHHHhCC
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      |++|+.  |++.|+++..|+.||+.|+|
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            578988  99999999999999999875

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=7.1e-07  Score=45.91  Aligned_cols=30  Identities=37%  Similarity=0.832  Sum_probs=27.7

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHHhC
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRCHQ   47 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~h~   47 (223)
                      .+|||.|..|||+..|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            589999999999999999999999998874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=7.4e-07  Score=42.90  Aligned_cols=23  Identities=22%  Similarity=0.585  Sum_probs=8.6

Q ss_pred             cccCCccCCccCChHHHHHHHhh
Q psy8183          82 THICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      ||.|++|+.+|.+++.+.-|.+.
T Consensus         3 p~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           3 PYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHH
T ss_pred             CcccchHHHHhhccccceEeeec
Confidence            33333333333333333333333

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=2.3e-06  Score=41.17  Aligned_cols=26  Identities=35%  Similarity=0.696  Sum_probs=20.9

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~  106 (223)
                      |||.|.+  |+++|...++|++|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5788877  8888888888888888755

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=3.9e-06  Score=40.33  Aligned_cols=28  Identities=32%  Similarity=0.708  Sum_probs=14.7

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      ||||.|+.  |+..|+++..+..|.+.|-|
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccC
Confidence            34555544  55555555555555555543

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=6e-06  Score=38.98  Aligned_cols=26  Identities=31%  Similarity=0.680  Sum_probs=17.6

Q ss_pred             ccCCccCCccCChHHHHHHHhhhccc
Q psy8183          83 HICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      |.|.+||......+.|++|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            56777777777777777777766654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4.7e-06  Score=38.93  Aligned_cols=25  Identities=32%  Similarity=0.810  Sum_probs=15.3

Q ss_pred             ccCCccCCccCChHHHHHHHhhhcc
Q psy8183          83 HICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ..|..||+.|...+.|++|.-+|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3566666666666666666666554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=5.5e-06  Score=38.90  Aligned_cols=26  Identities=23%  Similarity=0.544  Sum_probs=12.4

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      +||+|..|.+.-...+.|..|++.|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CcceeeecccccCCchheEEeeeccc
Confidence            44444444444444444444444444

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=6.9e-06  Score=38.35  Aligned_cols=26  Identities=35%  Similarity=0.599  Sum_probs=16.7

Q ss_pred             eecccCccccccCChHHHHHHHHHhCCC
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      +.|.+  |||+|...+.|++|...|+++
T Consensus         3 hvc~e--cgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAE--CGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTT--TCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHH--HhHHHHHHHHHHHHhhcccCC
Confidence            45655  666666666666666666653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=7.8e-06  Score=38.05  Aligned_cols=26  Identities=27%  Similarity=0.554  Sum_probs=22.2

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      +||+|..|.+.-...++|++|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78888888888888888888888874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1.2e-05  Score=37.96  Aligned_cols=27  Identities=30%  Similarity=0.498  Sum_probs=20.3

Q ss_pred             eecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      |.|++  |+......+-|+.|+++|++++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCCC
Confidence            67766  8877777777888888777653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=6.8e-06  Score=40.41  Aligned_cols=26  Identities=31%  Similarity=0.428  Sum_probs=14.1

Q ss_pred             ccCCcCcccccCchhHHhhhhhhcCC
Q psy8183          52 YKCNSCYKCFVDETALLEHIPKHKDS   77 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~h~~~   77 (223)
                      ..|+.||+.|.....|.+|...|.++
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~e   31 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGE   31 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCC
Confidence            34555555555555555555555555

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.3e-05  Score=37.99  Aligned_cols=24  Identities=33%  Similarity=0.634  Sum_probs=18.1

Q ss_pred             CCeecccCccccccCChHHHHHHHHH
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      +||.|.+  |.....+.++|+.|+++
T Consensus         1 kpy~cqy--c~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHH
T ss_pred             CCccccc--cccccccchhhhhhhhc
Confidence            5777777  77777777777777775

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.3e-05  Score=41.67  Aligned_cols=26  Identities=19%  Similarity=0.499  Sum_probs=22.5

Q ss_pred             CCcccCCccCCccCChHHHHHHHhhh
Q psy8183          80 LKTHICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        80 ~k~~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      .|||.|.+|+|.|.+++++.+|....
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhhhh
Confidence            38999999999999999999997553

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1e-05  Score=40.65  Aligned_cols=30  Identities=30%  Similarity=0.593  Sum_probs=25.2

Q ss_pred             CCeecccCcccc---ccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVK---AFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k---~f~~~~~L~~H~~~h~~~   49 (223)
                      |.|.|.|.+|.+   .|..++.|..|||.|+||
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            358899999965   588999999999999875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.5e-05  Score=37.35  Aligned_cols=27  Identities=37%  Similarity=0.673  Sum_probs=13.4

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      +||+|+.  |...-...+.|.-|.+.|+|
T Consensus         2 rpfkcql--csy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQI--CPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHTTCCS
T ss_pred             Ccceeee--cccccCCchheEEeeecccC
Confidence            4455544  55555555555555554443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.59  E-value=3e-05  Score=35.61  Aligned_cols=26  Identities=35%  Similarity=0.611  Sum_probs=21.5

Q ss_pred             ecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          23 KCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        23 ~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      .|+.  |.+.|.++..|+-|-+.|+|++
T Consensus         2 qcp~--c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--hHHHHHHhHhhhhccccccCCC
Confidence            5766  8888888888888888888874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.57  E-value=2.8e-05  Score=40.11  Aligned_cols=29  Identities=21%  Similarity=0.602  Sum_probs=23.3

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcccC
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAERS  109 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  109 (223)
                      +.|+|.+|++.|.+-..|--|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            67888888888888888888888886543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.55  E-value=3.2e-05  Score=34.92  Aligned_cols=24  Identities=29%  Similarity=0.672  Sum_probs=19.1

Q ss_pred             ccCCccCCccCChHHHHHHHhhhc
Q psy8183          83 HICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578888888888888888888763

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=4.5e-05  Score=34.99  Aligned_cols=25  Identities=32%  Similarity=0.644  Sum_probs=18.2

Q ss_pred             cCCccCCccCChHHHHHHHhhhccc
Q psy8183          84 ICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        84 ~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      +|+.|.+.|.++..|+.|-+.|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4777777777777777777777664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=6.1e-05  Score=35.64  Aligned_cols=26  Identities=31%  Similarity=0.575  Sum_probs=16.9

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      +||.|.+|.......++|+.|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            45666667666666666776666543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=6.4e-05  Score=34.87  Aligned_cols=26  Identities=46%  Similarity=0.818  Sum_probs=21.6

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQ   47 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~   47 (223)
                      |||+|..  |..+-.+.+.|+.|.++|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            6888888  8888888888888888875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.42  E-value=5.7e-05  Score=34.08  Aligned_cols=23  Identities=43%  Similarity=0.875  Sum_probs=14.0

Q ss_pred             ccCCcCcccccCchhHHhhhhhh
Q psy8183          52 YKCNSCYKCFVDETALLEHIPKH   74 (223)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~H~~~h   74 (223)
                      |+|..|.+.|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666555

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.41  E-value=3.8e-05  Score=37.13  Aligned_cols=23  Identities=30%  Similarity=0.683  Sum_probs=19.6

Q ss_pred             cccCCccCCccCChHHHHHHHhh
Q psy8183          82 THICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      ||.|.+|++.|.+++-|.+|...
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            68899999999999999998765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.40  E-value=4.9e-05  Score=35.70  Aligned_cols=25  Identities=24%  Similarity=0.502  Sum_probs=19.7

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhh
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h  105 (223)
                      .||.|..  |++.|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677854  888888888888888876

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=0.00016  Score=33.97  Aligned_cols=29  Identities=21%  Similarity=0.552  Sum_probs=18.4

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      +..|.|..  |...|+++-.|+.||..|+|+
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            34566666  666666666666666666653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=3.8e-05  Score=37.14  Aligned_cols=26  Identities=27%  Similarity=0.674  Sum_probs=18.9

Q ss_pred             CcccCCc--cCCccCChHHHHHHH-hhhc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHM-QKHA  106 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~-~~h~  106 (223)
                      |||.|.+  |.|.|+..+...+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4677776  778888777777776 6664

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00012  Score=34.42  Aligned_cols=23  Identities=35%  Similarity=0.766  Sum_probs=19.1

Q ss_pred             CeecccCccccccCChHHHHHHHHH
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      ||.|.+  |+..|..+.+|..||+.
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHS
T ss_pred             Ccccce--eeeeEeeccchhHhhhh
Confidence            688887  88888888888888874

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.24  E-value=0.00011  Score=34.51  Aligned_cols=26  Identities=23%  Similarity=0.537  Sum_probs=14.2

Q ss_pred             CccCCcCcccccCchhHHhhhhhhcC
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHKD   76 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~~   76 (223)
                      .|.|.+|...|.++-.|+.||..|+|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            35555555555555555555555554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00012  Score=34.53  Aligned_cols=27  Identities=37%  Similarity=0.653  Sum_probs=18.3

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      +||+|.+|.....+.++|..|++..++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            467777777777777777777766443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.21  E-value=0.00014  Score=37.41  Aligned_cols=30  Identities=27%  Similarity=0.697  Sum_probs=21.6

Q ss_pred             CCCeecccCccccccCChHHHHHHHHHhCCCC
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSRCHQTDK   50 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~k   50 (223)
                      .+.|+|.+  |++.|.+-..|--||+.|..++
T Consensus         3 ~r~~~C~~--C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSF--CKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTT--TCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCC--CCCccCCcccccchHhhhcchH
Confidence            35577877  8888887777877877775543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.17  E-value=0.00015  Score=34.67  Aligned_cols=30  Identities=30%  Similarity=0.535  Sum_probs=26.8

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhCCC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQTD   49 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~~~   49 (223)
                      |.|.|..|+|+..|.....|..|.-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            579999999999999999999999888875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00014  Score=34.15  Aligned_cols=23  Identities=35%  Similarity=0.729  Sum_probs=20.8

Q ss_pred             cccCCccCCccCChHHHHHHHhh
Q psy8183          82 THICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      ||.|..|...|.++.+|.+|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68899999999999999999975

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.00026  Score=32.65  Aligned_cols=23  Identities=30%  Similarity=0.642  Sum_probs=18.7

Q ss_pred             cccCCccCCccCChHHHHHHHhh
Q psy8183          82 THICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      ||+|..||+.|-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57888888888888888888654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00023  Score=36.37  Aligned_cols=27  Identities=37%  Similarity=0.750  Sum_probs=23.8

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  107 (223)
                      |||.|..  |+.+|.+.+.|..|...|.-
T Consensus         5 kPF~C~~pGC~q~F~neDhL~vHk~KH~m   33 (38)
T d1bhia_           5 KPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CceecCCCCccccccchHHHHHhhhhhee
Confidence            8999954  99999999999999998863

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.97  E-value=0.00019  Score=34.65  Aligned_cols=25  Identities=32%  Similarity=0.768  Sum_probs=17.9

Q ss_pred             CccCCcCcccccCchhHHhhhhhhc
Q psy8183          51 PYKCNSCYKCFVDETALLEHIPKHK   75 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~~h~   75 (223)
                      ||.|.+|++.|.+++-|.+|...-+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            5777778888887777777765433

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.94  E-value=0.00027  Score=32.48  Aligned_cols=26  Identities=35%  Similarity=0.689  Sum_probs=23.2

Q ss_pred             eecccCccccccCChHHHHHHHHHhC
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCHQ   47 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h~   47 (223)
                      |.|..++|+++|+.-..|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            78999999999999999999987774

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.0004  Score=32.55  Aligned_cols=23  Identities=35%  Similarity=0.784  Sum_probs=20.8

Q ss_pred             ecccCccccccCChHHHHHHHHH
Q psy8183          23 KCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        23 ~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      .|+.|||++.|+.+..|.-|.+.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            58999999999999999999874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00039  Score=35.96  Aligned_cols=24  Identities=38%  Similarity=0.785  Sum_probs=12.5

Q ss_pred             CCCCeecccCccccccCChHHHHHHH
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHS   43 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~   43 (223)
                      |-|||.|..  |+|.|.-+..+.+|.
T Consensus         2 GiKPYeC~~--C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNI--CAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSS--SCCEESCHHHHHHHH
T ss_pred             CCCceeccc--hhhhhhhHHHHHHhh
Confidence            445555544  555555555555553

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00048  Score=32.41  Aligned_cols=24  Identities=38%  Similarity=0.670  Sum_probs=16.2

Q ss_pred             CCeecccCccccccCChHHHHHHHHH
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      +||+|.+  |..-.++.++|..|++.
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHH
T ss_pred             CCcccce--ecccccCcchHHHHHHH
Confidence            4677766  77666677777777664

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.73  E-value=0.00047  Score=32.39  Aligned_cols=27  Identities=30%  Similarity=0.554  Sum_probs=18.2

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  107 (223)
                      +||.|.+  |.|.|.+.-.|.+|.-+|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            3566654  77777777777777776665

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00062  Score=33.54  Aligned_cols=27  Identities=26%  Similarity=0.711  Sum_probs=23.1

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      -.|.|..|||.|.++..+.+|-....+
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCC
Confidence            458999999999999999999877654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.36  E-value=0.0011  Score=30.48  Aligned_cols=22  Identities=41%  Similarity=1.025  Sum_probs=14.9

Q ss_pred             CccCCcCcccccCchhHHhhhh
Q psy8183          51 PYKCNSCYKCFVDETALLEHIP   72 (223)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~H~~   72 (223)
                      ||+|..||+.|-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4667777777777777766653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.31  E-value=0.0012  Score=29.58  Aligned_cols=22  Identities=27%  Similarity=0.570  Sum_probs=18.3

Q ss_pred             cccCCccCCccCChHHHHHHHh
Q psy8183          82 THICQYCGKSYTQETYLSKHMQ  103 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~  103 (223)
                      ||+|..|...|..+..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6888888888888888888864

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0015  Score=30.34  Aligned_cols=24  Identities=38%  Similarity=0.794  Sum_probs=21.5

Q ss_pred             ecccCccccccCChHHHHHHHHHh
Q psy8183          23 KCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus        23 ~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      .|+.-||+|.|.+.+.++.|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            588788999999999999998887

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.96  E-value=0.0037  Score=27.96  Aligned_cols=22  Identities=50%  Similarity=0.925  Sum_probs=16.8

Q ss_pred             CeecccCccccccCChHHHHHHHH
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSR   44 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~   44 (223)
                      ||+|..  |...|.++..|..||.
T Consensus         2 pykcss--csqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCcccH--HHHHHHHHHHHHHHHH
Confidence            677866  8888888877877765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.95  E-value=0.0028  Score=33.87  Aligned_cols=26  Identities=31%  Similarity=0.627  Sum_probs=23.6

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      -.|.|.+|+|.|.....|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45889999999999999999999885

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0032  Score=29.09  Aligned_cols=24  Identities=25%  Similarity=0.441  Sum_probs=18.1

Q ss_pred             ccCCccCCccCChHHHHHHHhhhc
Q psy8183          83 HICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      -+|..|.++.+.+..|+.|.++|-
T Consensus         3 ekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGC
T ss_pred             ccCcccccccCcHHHHHHhhcccc
Confidence            457778888888888888877763

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.55  E-value=0.0055  Score=27.48  Aligned_cols=22  Identities=32%  Similarity=0.836  Sum_probs=17.3

Q ss_pred             eecccCccccccCChHHHHHHHHH
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      |.|+.  |-+.|.++.++..|.++
T Consensus         2 ypcp~--cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEE
Confidence            77866  88888888888888764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.24  E-value=0.0081  Score=26.90  Aligned_cols=22  Identities=23%  Similarity=0.623  Sum_probs=12.9

Q ss_pred             ccCCccCCccCChHHHHHHHhh
Q psy8183          83 HICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      |.|+.|-+.|.+++++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4566666666666666666554

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.0064  Score=27.95  Aligned_cols=23  Identities=22%  Similarity=0.509  Sum_probs=20.4

Q ss_pred             cccCCccCCccCChHHHHHHHhh
Q psy8183          82 THICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      .|.|+.|+....+++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            37899999999999999999875

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.12  E-value=0.0082  Score=27.37  Aligned_cols=24  Identities=29%  Similarity=0.812  Sum_probs=18.0

Q ss_pred             ccCCc--cCCccCChHHHHHHHhhhc
Q psy8183          83 HICQY--CGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        83 ~~C~~--C~~~f~~~~~l~~H~~~h~  106 (223)
                      |.|..  |++.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            55643  8888888888888887764

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.97  E-value=0.011  Score=29.22  Aligned_cols=19  Identities=21%  Similarity=0.522  Sum_probs=11.7

Q ss_pred             CccCChHHHHHHHhhhccc
Q psy8183          90 KSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        90 ~~f~~~~~l~~H~~~h~~~  108 (223)
                      +.|.....|..|+|.|+++
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3466666666666666653

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.026  Score=25.95  Aligned_cols=23  Identities=35%  Similarity=0.602  Sum_probs=13.6

Q ss_pred             eecccCccccccCChHHHHHHHHHh
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRCH   46 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~h   46 (223)
                      -+|.+  |.+...++..|+.|.|+|
T Consensus         3 ekc~e--csyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSE--CSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSS--SSCEESSHHHHHHHHGGG
T ss_pred             ccCcc--cccccCcHHHHHHhhccc
Confidence            45544  666666666666666655

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.99  E-value=0.025  Score=27.64  Aligned_cols=26  Identities=19%  Similarity=0.534  Sum_probs=18.5

Q ss_pred             CeecccCccccccCChHHHHHHHHHhCC
Q psy8183          21 PYKCRHPGCVKAFSQLSNLQSHSRCHQT   48 (223)
Q Consensus        21 ~~~C~~p~C~k~f~~~~~L~~H~~~h~~   48 (223)
                      .|.|..  |+|.|.++..+.+|-....|
T Consensus         4 afvcsk--cgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSK--CGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSS--SCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecc--cccchhcchHHHHHhhhcCC
Confidence            477866  88888888877777665443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.02  Score=30.49  Aligned_cols=26  Identities=27%  Similarity=0.502  Sum_probs=20.7

Q ss_pred             CCeecccCccccccCChHHHHHHHHHhC
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRCHQ   47 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~h~   47 (223)
                      -.|.|-.  |+|.|.+...|+.|...|-
T Consensus         5 ~l~pCG~--CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGL--CGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTT--TCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccc--cccccCCHHHHhHhHHhcC
Confidence            3578877  8888888888888877763

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.68  E-value=0.029  Score=26.52  Aligned_cols=27  Identities=37%  Similarity=0.830  Sum_probs=15.9

Q ss_pred             CcccCCc--cCCccCChHHHHHHHhhhcc
Q psy8183          81 KTHICQY--CGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        81 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  107 (223)
                      |.|.|..  |+-.|.....|.-|+-.|++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            3455643  66666666666666666554

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.54  E-value=0.062  Score=24.94  Aligned_cols=26  Identities=27%  Similarity=0.607  Sum_probs=20.7

Q ss_pred             CCeecccCccccccCChHHHHHHHHH
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      +-|.|+..+|.-.|..+.+++.|...
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CCccccCCCcceEEeehHHHHHHHhh
Confidence            34788877888888888888888764

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.10  E-value=0.035  Score=26.81  Aligned_cols=23  Identities=22%  Similarity=0.583  Sum_probs=18.8

Q ss_pred             CcccCCccCCccCChHHHHHHHh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQ  103 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~  103 (223)
                      ..|.|.-||-+|+..+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45888889988988888888864

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.27  E-value=0.063  Score=26.24  Aligned_cols=26  Identities=23%  Similarity=0.528  Sum_probs=18.8

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~  106 (223)
                      ..|.|.+|.+.|...+++-+|.-+-+
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            45778888888888887777765533

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.059  Score=24.77  Aligned_cols=20  Identities=25%  Similarity=0.610  Sum_probs=16.8

Q ss_pred             ccCCccCChHHHHHHHhhhc
Q psy8183          87 YCGKSYTQETYLSKHMQKHA  106 (223)
Q Consensus        87 ~C~~~f~~~~~l~~H~~~h~  106 (223)
                      -|+|.|...+.+++|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            38899999999999988773

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.49  E-value=0.097  Score=28.34  Aligned_cols=28  Identities=39%  Similarity=0.797  Sum_probs=25.6

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHH
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      .-+||.|-+.||..+|.-..+|..|.+.
T Consensus        17 pyrpyrcvhqgc~aaftiq~nlilhy~a   44 (61)
T d1x3ca1          17 PYRPYRCVHQGCFAAFTIQQNLILHYQA   44 (61)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHH
T ss_pred             CCCceeeeccchhhhhhhhhhHHHHHHH
Confidence            4589999999999999999999999885

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.43  E-value=0.026  Score=32.40  Aligned_cols=6  Identities=33%  Similarity=1.093  Sum_probs=2.6

Q ss_pred             cccccC
Q psy8183          29 CVKAFS   34 (223)
Q Consensus        29 C~k~f~   34 (223)
                      |++.|.
T Consensus        20 C~~~ys   25 (62)
T d1vd4a_          20 CSSTFT   25 (62)
T ss_dssp             SCCEEE
T ss_pred             CCCCcc
Confidence            444444

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.39  E-value=0.091  Score=25.27  Aligned_cols=23  Identities=30%  Similarity=0.692  Sum_probs=20.3

Q ss_pred             ecccCccccccCChHHHHHHHHH
Q psy8183          23 KCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        23 ~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      .|.|.+|+..|.+...|..|+..
T Consensus         3 nChW~~C~~eFdtQd~LV~Hinn   25 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHINS   25 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHH
T ss_pred             cccccccccccCCHHHHHHHccc
Confidence            47788899999999999999985

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.11  Score=23.68  Aligned_cols=22  Identities=32%  Similarity=0.679  Sum_probs=17.7

Q ss_pred             eecccCccccccCChHHHHHHHHH
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      |.|+.  |+....+++.|.-|++.
T Consensus         3 ~qcph--c~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPH--CDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSS--SSCEESSHHHHHHHHHH
T ss_pred             ccCCc--chhheeehhhhhHHhhh
Confidence            77865  88888888888888875

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.26  E-value=0.039  Score=32.22  Aligned_cols=24  Identities=25%  Similarity=0.581  Sum_probs=21.0

Q ss_pred             CcccCCccCCccCChHHHHHHHhh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      -.|-|..|+|.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            347899999999999999999865

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=89.81  E-value=0.069  Score=26.97  Aligned_cols=10  Identities=30%  Similarity=0.311  Sum_probs=5.2

Q ss_pred             CCccCCcCcc
Q psy8183          50 KPYKCNSCYK   59 (223)
Q Consensus        50 k~~~C~~C~~   59 (223)
                      +.|.|.+||.
T Consensus         4 ~~~vC~vCGy   13 (36)
T d1yuza2           4 KFHLCPICGY   13 (36)
T ss_dssp             CEEECSSSCC
T ss_pred             CEEECCCCCC
Confidence            3455555554

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.57  E-value=0.2  Score=23.16  Aligned_cols=23  Identities=22%  Similarity=0.618  Sum_probs=15.7

Q ss_pred             cccCC--ccCCccCChHHHHHHHhh
Q psy8183          82 THICQ--YCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        82 ~~~C~--~C~~~f~~~~~l~~H~~~  104 (223)
                      .|.|+  .|+..|..+.++++|...
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhh
Confidence            35664  377777777777777654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.34  E-value=0.1  Score=25.13  Aligned_cols=23  Identities=35%  Similarity=0.599  Sum_probs=17.9

Q ss_pred             CCeecccCccccccCChHHHHHHHH
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSR   44 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~   44 (223)
                      -.|.|.-  ||..|++.+.|..|+.
T Consensus         7 arf~c~p--cgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLP--CGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTT--TCCBCSCHHHHHHHTT
T ss_pred             cceeccc--cceeecChhHHHhhhh
Confidence            3578865  8888888888888854

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.80  E-value=0.31  Score=22.44  Aligned_cols=22  Identities=23%  Similarity=0.487  Sum_probs=14.6

Q ss_pred             ccCCccCCccCChHHHHHHHhh
Q psy8183          83 HICQYCGKSYTQETYLSKHMQK  104 (223)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~  104 (223)
                      |.|..||+...+...++-|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            5677777777777777666544

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.70  E-value=0.19  Score=24.47  Aligned_cols=26  Identities=27%  Similarity=0.815  Sum_probs=16.7

Q ss_pred             CCCCeecccCccccccCChHHHHHHHHH
Q psy8183          18 GDKPYKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        18 ~~k~~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      |+..|.|..  |.+.|...+++-+|..+
T Consensus         5 g~~~yRC~~--C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKV--CSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTT--TCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeeh--hhHHHHHHHHHHHHHHh
Confidence            344566666  77776666666666654

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.48  E-value=0.084  Score=26.83  Aligned_cols=9  Identities=33%  Similarity=0.670  Sum_probs=4.7

Q ss_pred             CccCCcCcc
Q psy8183          51 PYKCNSCYK   59 (223)
Q Consensus        51 ~~~C~~C~~   59 (223)
                      .|.|.+||.
T Consensus         5 ~~~C~vCG~   13 (37)
T d1nnqa2           5 VYICPICGY   13 (37)
T ss_dssp             EEECTTTCC
T ss_pred             EEECCCCCC
Confidence            355555554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.59  E-value=0.38  Score=22.15  Aligned_cols=22  Identities=27%  Similarity=0.730  Sum_probs=15.2

Q ss_pred             eecccCccccccCChHHHHHHHHH
Q psy8183          22 YKCRHPGCVKAFSQLSNLQSHSRC   45 (223)
Q Consensus        22 ~~C~~p~C~k~f~~~~~L~~H~~~   45 (223)
                      |.|..  |||..++...++.|+..
T Consensus         3 ftc~h--cgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHH--CGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSS--SCCCCSSHHHHHHHHHH
T ss_pred             eechh--HHHHHhhccCceEEEee
Confidence            66766  77777777777777654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.77  E-value=0.28  Score=25.81  Aligned_cols=22  Identities=23%  Similarity=0.498  Sum_probs=9.6

Q ss_pred             cccCCccCCccCChHHHHHHHh
Q psy8183          82 THICQYCGKSYTQETYLSKHMQ  103 (223)
Q Consensus        82 ~~~C~~C~~~f~~~~~l~~H~~  103 (223)
                      |-.|++|+-...+..+|++|+.
T Consensus        24 patcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          24 PATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHH
Confidence            3444444444444444444443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.03  E-value=0.11  Score=30.23  Aligned_cols=23  Identities=30%  Similarity=0.608  Sum_probs=18.9

Q ss_pred             CCeecccCccccccCChHHHHHHHH
Q psy8183          20 KPYKCRHPGCVKAFSQLSNLQSHSR   44 (223)
Q Consensus        20 k~~~C~~p~C~k~f~~~~~L~~H~~   44 (223)
                      -.|-|..  |++.|.+...|..|++
T Consensus        14 gqfYCv~--C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLA--CARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETT--TTEECSSHHHHHHHTT
T ss_pred             CEEeccc--ccCccCCHHHHHHHHc
Confidence            3478877  9999999999888876

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.56  E-value=0.14  Score=29.18  Aligned_cols=37  Identities=24%  Similarity=0.465  Sum_probs=26.1

Q ss_pred             CCCccCCcCcccccCchhHHhhhhhhcCCCCCCcccCCccCCc
Q psy8183          49 DKPYKCNSCYKCFVDETALLEHIPKHKDSKHLKTHICQYCGKS   91 (223)
Q Consensus        49 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~k~~~C~~C~~~   91 (223)
                      ...|+|+.|+++|..-..+..   .-...   ..|.|.+|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~~---~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPMT---GTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETTT---TEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcCC---CeEEecCCCCE
Confidence            456999999999977666532   22222   56999999853

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=85.06  E-value=0.18  Score=25.51  Aligned_cols=9  Identities=22%  Similarity=0.261  Sum_probs=4.0

Q ss_pred             cccCCccCC
Q psy8183          82 THICQYCGK   90 (223)
Q Consensus        82 ~~~C~~C~~   90 (223)
                      .-.|+.||.
T Consensus        22 ~g~CD~cg~   30 (37)
T d2ak3a2          22 MGIDDLTGE   30 (37)
T ss_dssp             TTBCTTTCC
T ss_pred             cCCccCCCC
Confidence            334444443

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.44  E-value=0.43  Score=23.27  Aligned_cols=25  Identities=36%  Similarity=0.679  Sum_probs=17.9

Q ss_pred             CcccCCccCCccCChHHHHHHHhhh
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKH  105 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h  105 (223)
                      +-|.|+.|-+-..+...|.+|+...
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~KC   30 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMKKC   30 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHT
T ss_pred             eeeeehhhhhhhCCHHHHHHHHHhC
Confidence            6677777777777777777777543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.69  E-value=0.26  Score=27.95  Aligned_cols=28  Identities=25%  Similarity=0.498  Sum_probs=24.6

Q ss_pred             CcccCCccCCccCChHHHHHHHhhhccc
Q psy8183          81 KTHICQYCGKSYTQETYLSKHMQKHAER  108 (223)
Q Consensus        81 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  108 (223)
                      ..|+|..|.-.|.....|..|+..|.++
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            5699999999999999999999888765

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=82.78  E-value=0.17  Score=26.90  Aligned_cols=10  Identities=40%  Similarity=0.929  Sum_probs=5.2

Q ss_pred             ccCCcCcccc
Q psy8183          52 YKCNSCYKCF   61 (223)
Q Consensus        52 ~~C~~C~~~f   61 (223)
                      |.|..||+.|
T Consensus         4 y~C~~CgyiY   13 (45)
T d6rxna_           4 YVCNVCGYEY   13 (45)
T ss_dssp             EEETTTCCEE
T ss_pred             eEeCCCCeEE
Confidence            5555555444

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.69  E-value=0.81  Score=22.22  Aligned_cols=24  Identities=33%  Similarity=0.620  Sum_probs=17.9

Q ss_pred             CCCeecccCccccccCChHHHHHHHH
Q psy8183          19 DKPYKCRHPGCVKAFSQLSNLQSHSR   44 (223)
Q Consensus        19 ~k~~~C~~p~C~k~f~~~~~L~~H~~   44 (223)
                      .+.|.|+.  |=|-..++..|.+|+.
T Consensus         5 pkLyiCEf--CLKYmks~~~l~RH~~   28 (33)
T d1m36a_           5 PKLYLCEF--CLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             Ceeeeehh--hhhhhCCHHHHHHHHH
Confidence            35677877  8887788888888765

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=81.08  E-value=0.25  Score=33.95  Aligned_cols=42  Identities=29%  Similarity=0.531  Sum_probs=28.4

Q ss_pred             hhHHhhhhhhcCCC-C---CCcccCCccCCccCChHHHHHHHhhhcc
Q psy8183          65 TALLEHIPKHKDSK-H---LKTHICQYCGKSYTQETYLSKHMQKHAE  107 (223)
Q Consensus        65 ~~l~~H~~~h~~~~-~---~k~~~C~~C~~~f~~~~~l~~H~~~h~~  107 (223)
                      ..|..|++.---.- .   +.-|+|..||+ |....+|.+|++.|..
T Consensus       125 grlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG~  170 (218)
T d2czra1         125 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHGI  170 (218)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTTC
T ss_pred             HHHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcCc
Confidence            34667765432110 0   13478999998 7788999999998853

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.29  E-value=0.88  Score=20.09  Aligned_cols=20  Identities=20%  Similarity=0.630  Sum_probs=12.5

Q ss_pred             cCCccCCccCChHHHHHHHh
Q psy8183          84 ICQYCGKSYTQETYLSKHMQ  103 (223)
Q Consensus        84 ~C~~C~~~f~~~~~l~~H~~  103 (223)
                      .|++|..+|.+..--..|..
T Consensus         2 vcpycslrf~sp~lk~ehe~   21 (26)
T d1wjpa2           2 VCPYCSLRFFSPELKQEHES   21 (26)
T ss_dssp             CCTTTCCCBSSHHHHHHHHH
T ss_pred             CCCcceeeeCCHHHhhHhhh
Confidence            46777777776665555543