Psyllid ID: psy818
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 214 | 2.2.26 [Sep-21-2011] | |||||||
| Q2TA03 | 259 | Ubiquitin-conjugating enz | yes | N/A | 0.724 | 0.598 | 0.780 | 7e-71 | |
| Q8N2K1 | 259 | Ubiquitin-conjugating enz | yes | N/A | 0.724 | 0.598 | 0.774 | 1e-70 | |
| Q6P073 | 259 | Ubiquitin-conjugating enz | yes | N/A | 0.724 | 0.598 | 0.774 | 3e-70 | |
| P33296 | 250 | Ubiquitin-conjugating enz | yes | N/A | 0.845 | 0.724 | 0.5 | 3e-49 | |
| Q6FQK7 | 246 | Ubiquitin-conjugating enz | yes | N/A | 0.915 | 0.796 | 0.482 | 9e-48 | |
| Q9FK29 | 243 | Probable ubiquitin-conjug | yes | N/A | 0.752 | 0.662 | 0.527 | 3e-47 | |
| Q6CMG6 | 251 | Ubiquitin-conjugating enz | yes | N/A | 0.719 | 0.613 | 0.561 | 6e-47 | |
| Q74Z34 | 242 | Ubiquitin-conjugating enz | yes | N/A | 0.738 | 0.652 | 0.527 | 7e-47 | |
| Q6BYG4 | 242 | Ubiquitin-conjugating enz | yes | N/A | 0.696 | 0.615 | 0.593 | 3e-46 | |
| Q9SHI7 | 237 | Ubiquitin-conjugating enz | no | N/A | 0.738 | 0.666 | 0.525 | 3e-46 |
| >sp|Q2TA03|UB2J2_BOVIN Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 266 bits (680), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 121/155 (78%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKRQLAAQSLVFNLKDKVFCELFPEVVEEI 167
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Catalyzes the covalent attachment of ubiquitin to other proteins. Seems to function in the selective degradation of misfolded membrane proteins from the endoplasmic reticulum (ERAD). Bos taurus (taxid: 9913) EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: 1EC: 9 |
| >sp|Q8N2K1|UB2J2_HUMAN Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 265 bits (678), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 120/155 (77%), Positives = 137/155 (88%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLA +SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEI 167
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Catalyzes the covalent attachment of ubiquitin to other proteins. Seems to function in the selective degradation of misfolded membrane proteins from the endoplasmic reticulum (ERAD). Homo sapiens (taxid: 9606) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 9 |
| >sp|Q6P073|UB2J2_MOUSE Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 264 bits (674), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 120/155 (77%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ ++QLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKKQLAAQSLVFNLKDKVFCELFPEVVEEI 167
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In case of infection by the murid herpesvirus 4, its association with the viral E3 ligase K3 mediates ubiquitination of host surface class I (MHC-I) H-2D(b)/H2-D1 and H-2K(b)/H2-K1 molecules before they exit the endoplasmic reticulum, leading to their degradation by the ERAD system, thus blocking the immune detection of virus-infected cells. The complex formed with the murid herpesvirus 4 protein K3 mediates ubiquitination of lysine, as well as serine and threonine residues present in the cytoplasmic tail of surface class I molecules and promotes ubiquitination of hydroxylated serine or threonine residues via ester bonds instead of the classical isopeptide linkage. Mus musculus (taxid: 10090) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 9 |
| >sp|P33296|UBC6_YEAST Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBC6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 194 bits (494), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 125/184 (67%), Gaps = 3/184 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M++K A RL ++Y + ++P PY++A PN NILEW Y++ GP +T Y+GG Y G L
Sbjct: 1 MATKQ--AHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTL 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
FP D+P+KPP+I MITPNGRFK NTRLCLSMSD+HPDTWNP WSVSTIL GLLSFM
Sbjct: 59 TFPSDYPYKPPAIRMITPNGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTSD 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFN-LNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDK 179
T GSI SD++++ LA S+ +N + F +FP++VQ L K ++ + +
Sbjct: 119 EATTGSITTSDHQKKTLARNSISYNTFQNVRFKLIFPEVVQENVETLEKRKLDEGDAANT 178
Query: 180 FDKS 183
D++
Sbjct: 179 GDET 182
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Catalyzes the covalent attachment of ubiquitin to other proteins. Functions in degradation of misfolded or regulated proteins localized in the endoplasmic reticulum (ER) lumen or membrane via the ubiquitin-proteasome system. Cognate E2 conjugating enzyme for the DOA10 ubiquitin ligase complex, which is part of the ERAD-C pathway responsible for the rapid degradation of membrane proteins with misfolded cytoplasmic domains. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 9 |
| >sp|Q6FQK7|UBC6_CANGA Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=UBC6 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 189 bits (481), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 135/203 (66%), Gaps = 7/203 (3%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M++K A RL ++Y + ++P P++IA PN NILEW YV+ GP +T Y+GG Y G L
Sbjct: 1 MATKQ--AQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTL 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
FP D+P+KPP+I MITPNGRFK NTRLCLSMSD+HPDTWNP WSV+TIL GLLSFM
Sbjct: 59 TFPSDYPYKPPAIRMITPNGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMTGD 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFN-LNDKNFCELFPDLVQ-SISPGLVKSQIFKS-SLG 177
T GSI + E++ LA +S+ +N N F +FP++V+ +I+ + Q K S+
Sbjct: 119 ESTTGSITTTQQEKKILAKKSMYYNTFNSTRFKLVFPEIVEKNITELQRRKQEEKDMSMF 178
Query: 178 DKFDKSLYEA--HPCLQAEDIAN 198
+K + L +A ++ +DI N
Sbjct: 179 EKKEDPLVKAAREKAIEVKDIVN 201
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Catalyzes the covalent attachment of ubiquitin to other proteins. Functions in degradation of misfolded or regulated proteins localized in the endoplasmic reticulum (ER) lumen or membrane via the ubiquitin-proteasome system. Cognate E2 conjugating enzyme for the DOA10 ubiquitin ligase complex, which is part of the ERAD-C pathway responsible for the rapid degradation of membrane proteins with misfolded cytoplasmic domains. Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 9 |
| >sp|Q9FK29|UBC33_ARATH Probable ubiquitin-conjugating enzyme E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 116/163 (71%), Gaps = 2/163 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+ K C RL+++Y L K+P+ +V+A P+P +ILEW YV+ G E T + GG Y GK+
Sbjct: 1 MAEKAC--IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKI 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
FP ++P+KPP I M TPNGRF T ++CLSMSDFHP++WNP WSVS+ILTGLLSFM++
Sbjct: 59 KFPPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDN 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSIS 163
SPT GS+ S E+++LA SL FN F +LFP+ V+ S
Sbjct: 119 SPTTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYS 161
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Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 9 |
| >sp|Q6CMG6|UBC6_KLULA Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=UBC6 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 187 bits (474), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL ++Y + +P P++IA P+ NILEW YV+ GP +T YE G Y G L FP D+P
Sbjct: 6 ANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYP 65
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
F PP+I MITPNGRFK NTRLCLSMSD+HP+ WNPAWSV TIL GLLSFM T GS+
Sbjct: 66 FNPPAIRMITPNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMTGDEQTTGSV 125
Query: 128 EMSDYERRQLAARSLRFNL-NDKNFCELFPDLVQS 161
SD ++R LA +S FN ++ F +FPDL +S
Sbjct: 126 STSDKDKRTLAKKSKHFNTYSNFKFKNMFPDLRES 160
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Catalyzes the covalent attachment of ubiquitin to other proteins. Functions in degradation of misfolded or regulated proteins localized in the endoplasmic reticulum (ER) lumen or membrane via the ubiquitin-proteasome system. Cognate E2 conjugating enzyme for the DOA10 ubiquitin ligase complex, which is part of the ERAD-C pathway responsible for the rapid degradation of membrane proteins with misfolded cytoplasmic domains. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 9 |
| >sp|Q74Z34|UBC6_ASHGO Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC6 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 186 bits (473), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+S+ A RL ++Y + ++P PY++A P NIL W YV+ GP T YE G Y G L
Sbjct: 1 MASRQ--AYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTL 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
VFP D+PF PP+I M+TPNGRF+ NTRLCLSMSD+HPDTWNP+WSV+TILTGLLSFM
Sbjct: 59 VFPNDYPFNPPAIRMLTPNGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTD 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKN-FCELFPDLVQ 160
++G++E +D +R+ AA+S N FC++FP+L +
Sbjct: 119 ESSIGTMESTDSTKRKYAAKSKEHNATRSPIFCQIFPELAE 159
|
Catalyzes the covalent attachment of ubiquitin to other proteins. Functions in degradation of misfolded or regulated proteins localized in the endoplasmic reticulum (ER) lumen or membrane via the ubiquitin-proteasome system. Cognate E2 conjugating enzyme for the DOA10 ubiquitin ligase complex, which is part of the ERAD-C pathway responsible for the rapid degradation of membrane proteins with misfolded cytoplasmic domains. Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 9 |
| >sp|Q6BYG4|UBC6_DEBHA Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=UBC6 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
RL ++Y + +P PYV A+PN NILEW YV+ GP +T +E G Y G L FP ++PFKP
Sbjct: 9 RLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKP 68
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMS 130
PSI MITPNGRF NTRLCLSMSD+HPDTWNPAWSV+TILTGLLSFM T GSI S
Sbjct: 69 PSISMITPNGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMTGDESTTGSITTS 128
Query: 131 DYERRQLAARSLRF-NLNDKNFCELFPDLV 159
D +++LA S + N ++ F + FPDLV
Sbjct: 129 DNVKKRLARSSKEWNNAENQRFTKQFPDLV 158
|
Catalyzes the covalent attachment of ubiquitin to other proteins. Functions in degradation of misfolded or regulated proteins localized in the endoplasmic reticulum (ER) lumen or membrane via the ubiquitin-proteasome system. Cognate E2 conjugating enzyme for the DOA10 ubiquitin ligase complex, which is part of the ERAD-C pathway responsible for the rapid degradation of membrane proteins with misfolded cytoplasmic domains. Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 9 |
| >sp|Q9SHI7|UBC34_ARATH Ubiquitin-conjugating enzyme E2 34 OS=Arabidopsis thaliana GN=UBC34 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 184 bits (467), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 115/160 (71%), Gaps = 2/160 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+ K C RL+++Y L K+P+ +V+A P+P +ILEW YV+ G E T + GG Y GK+
Sbjct: 1 MAEKAC--IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKI 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
FP ++P+KPP I M TPNGRF T ++CLSMSDFHP++WNP WSVS+ILTGLLSFM++
Sbjct: 59 KFPPEYPYKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDT 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQ 160
SPT GS+ + E+++LA SL FN F +LFP+ V+
Sbjct: 119 SPTTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVE 158
|
Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 214 | ||||||
| 242247133 | 222 | ubiquitin-conjugating enzyme E2 j2-like | 0.817 | 0.788 | 0.725 | 6e-73 | |
| 332025422 | 230 | Ubiquitin-conjugating enzyme E2 J2 [Acro | 0.757 | 0.704 | 0.759 | 1e-71 | |
| 91082969 | 225 | PREDICTED: similar to ubiquitin conjugat | 0.934 | 0.888 | 0.645 | 3e-71 | |
| 307179804 | 232 | Ubiquitin-conjugating enzyme E2 J2 [Camp | 0.794 | 0.732 | 0.720 | 2e-70 | |
| 383851191 | 230 | PREDICTED: ubiquitin-conjugating enzyme | 0.775 | 0.721 | 0.734 | 5e-70 | |
| 395526151 | 259 | PREDICTED: ubiquitin-conjugating enzyme | 0.724 | 0.598 | 0.793 | 6e-70 | |
| 126329475 | 259 | PREDICTED: ubiquitin-conjugating enzyme | 0.724 | 0.598 | 0.787 | 2e-69 | |
| 301788914 | 259 | PREDICTED: ubiquitin-conjugating enzyme | 0.724 | 0.598 | 0.787 | 2e-69 | |
| 307196252 | 230 | Ubiquitin-conjugating enzyme E2 J2 [Harp | 0.794 | 0.739 | 0.711 | 2e-69 | |
| 432859696 | 261 | PREDICTED: ubiquitin-conjugating enzyme | 0.724 | 0.593 | 0.787 | 2e-69 |
| >gi|242247133|ref|NP_001156134.1| ubiquitin-conjugating enzyme E2 j2-like [Acyrthosiphon pisum] gi|239788395|dbj|BAH70882.1| ACYPI003183 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 152/175 (86%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+ K AT RLKQDY++LK DP+PYVIAEPNP+NILEW+YVV GP+++ Y GG YLG+L
Sbjct: 1 MAPKTSSATLRLKQDYIRLKNDPVPYVIAEPNPSNILEWYYVVSGPDDSPYAGGYYLGRL 60
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
VFPRDFPFKPPSIYMITPNGRFKTNTRLCLS+SD+HPDTWNPAWSVSTILTGLLSFM+E
Sbjct: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSISDYHPDTWNPAWSVSTILTGLLSFMLEN 120
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSS 175
SPT+GSIEM+DYERRQLAA+SL N+ D+NFCELFP+L +I + K + +++
Sbjct: 121 SPTMGSIEMTDYERRQLAAQSLESNVCDENFCELFPELTMTIQNEIEKRNLARAN 175
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332025422|gb|EGI65589.1| Ubiquitin-conjugating enzyme E2 J2 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 123/162 (75%), Positives = 144/162 (88%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+ K ATARL+QDY++LK+DP+PYV+AEP P+NILEW YVVIGPE T YEGG Y GKL
Sbjct: 1 MNRKTNSATARLRQDYLRLKRDPVPYVLAEPVPSNILEWHYVVIGPEKTPYEGGFYHGKL 60
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
+FP +FPF+PPSIYMITPNGRFK NTRLCLS+SDFHPDTWNPAWSVSTILTGLLSFM+E+
Sbjct: 61 IFPGEFPFQPPSIYMITPNGRFKVNTRLCLSISDFHPDTWNPAWSVSTILTGLLSFMIEK 120
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
SPTLGSI +DYE+RQLAA+SL +NL DK FCELFP+ V++I
Sbjct: 121 SPTLGSINTTDYEKRQLAAQSLEYNLRDKMFCELFPETVETI 162
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91082969|ref|XP_973818.1| PREDICTED: similar to ubiquitin conjugating enzyme E2, J2 [Tribolium castaneum] gi|270007042|gb|EFA03490.1| hypothetical protein TcasGA2_TC013489 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/200 (64%), Positives = 152/200 (76%)
Query: 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFP 63
K AT+RLKQDY++LK+DP+PY+ AEP P+NILEW YVV GPENT YEGG Y GKLVFP
Sbjct: 5 KTNSATSRLKQDYLRLKRDPVPYITAEPLPSNILEWHYVVCGPENTPYEGGFYHGKLVFP 64
Query: 64 RDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
R+FPFKPPSIYMITPNGRF+TN +LCLS+SDFHPDTWNPAWSVSTILTGLLSFM+E+SPT
Sbjct: 65 REFPFKPPSIYMITPNGRFRTNKKLCLSISDFHPDTWNPAWSVSTILTGLLSFMLEKSPT 124
Query: 124 LGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKS 183
LGSIE S+Y++RQ A SL FNL DK FC+LFPD V I L + +++ + S
Sbjct: 125 LGSIETSEYDKRQFAYHSLEFNLKDKEFCDLFPDTVTKIQDVLTQRSNMNNNVAENQKTS 184
Query: 184 LYEAHPCLQAEDIANTVEFI 203
A P I N + FI
Sbjct: 185 RSVAEPSNFQSCITNLIVFI 204
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307179804|gb|EFN67994.1| Ubiquitin-conjugating enzyme E2 J2 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 146/172 (84%), Gaps = 2/172 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEW--FYVVIGPENTQYEGGMYLG 58
M+ K ATARLKQDY++LKKDP+PYV+AEP P+NILEW YVV+GPE T YEGG Y G
Sbjct: 1 MNRKTNSATARLKQDYLRLKKDPVPYVLAEPVPSNILEWQVHYVVVGPEKTPYEGGFYHG 60
Query: 59 KLVFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMV 118
KL+FP +FPF+PPSIYM TPNGRFK NTRLCLS+SDFHPDTWNPAWSVSTILTGLLSFM+
Sbjct: 61 KLIFPGEFPFQPPSIYMTTPNGRFKVNTRLCLSISDFHPDTWNPAWSVSTILTGLLSFMI 120
Query: 119 ERSPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQ 170
E+SPTLGSI +DYE+RQLAA+SL +NL DK FCELFP+ V++I L + +
Sbjct: 121 EKSPTLGSINTTDYEKRQLAAQSLEYNLRDKMFCELFPETVEAIKTELERRR 172
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383851191|ref|XP_003701122.1| PREDICTED: ubiquitin-conjugating enzyme E2 J2-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 122/166 (73%), Positives = 141/166 (84%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+ ATARLKQDY++LKKDP+PYV+AEP P+NILEW YVV GPE T YEGG Y GKL
Sbjct: 1 MNRTTNSATARLKQDYLRLKKDPVPYVLAEPVPSNILEWHYVVKGPEKTPYEGGFYHGKL 60
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
+FP +FPF+PPSIYM TPNGRFK NTRLCLS+SDFHPDTWNPAWSVSTILTGLLSFM+E+
Sbjct: 61 IFPGEFPFQPPSIYMTTPNGRFKVNTRLCLSISDFHPDTWNPAWSVSTILTGLLSFMIEK 120
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGL 166
SPTLGSI +DYE++QLAA+SL +NL DK FCELFP+ V+ I L
Sbjct: 121 SPTLGSINTTDYEKKQLAAQSLEYNLKDKMFCELFPETVEVIKAEL 166
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|395526151|ref|XP_003765232.1| PREDICTED: ubiquitin-conjugating enzyme E2 J2 [Sarcophilus harrisii] | Back alignment and taxonomy information |
|---|
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 123/155 (79%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SDY ++QLAA+SL FNL DK FCELFPDLV+ I
Sbjct: 133 ETSDYTKKQLAAQSLAFNLKDKVFCELFPDLVEEI 167
|
Source: Sarcophilus harrisii Species: Sarcophilus harrisii Genus: Sarcophilus Family: Dasyuridae Order: Dasyuromorphia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|126329475|ref|XP_001365337.1| PREDICTED: ubiquitin-conjugating enzyme E2 J2-like [Monodelphis domestica] | Back alignment and taxonomy information |
|---|
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/155 (78%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SDY +RQLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDYTKRQLAAQSLSFNLKDKVFCELFPEVVEEI 167
|
Source: Monodelphis domestica Species: Monodelphis domestica Genus: Monodelphis Family: Didelphidae Order: Didelphimorphia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|301788914|ref|XP_002929870.1| PREDICTED: ubiquitin-conjugating enzyme E2 J2-like [Ailuropoda melanoleuca] | Back alignment and taxonomy information |
|---|
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/155 (78%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKLVFPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLVFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKRQLAAQSLAFNLKDKVFCELFPEVVEEI 167
|
Source: Ailuropoda melanoleuca Species: Ailuropoda melanoleuca Genus: Ailuropoda Family: Ursidae Order: Carnivora Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|307196252|gb|EFN77898.1| Ubiquitin-conjugating enzyme E2 J2 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 144/170 (84%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+ K A+ARLKQDY++LKKDP+PYV+AEP P+NILEW YVV GPE T YEGG Y GKL
Sbjct: 1 MNRKTNSASARLKQDYLRLKKDPVPYVLAEPVPSNILEWHYVVKGPEKTPYEGGFYHGKL 60
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
+FP +FPF+PPSIYM TPNGRFK NTRLCLS+SDFHPDTWNPAWSVSTILTGLLSFM+E+
Sbjct: 61 IFPGEFPFQPPSIYMTTPNGRFKVNTRLCLSISDFHPDTWNPAWSVSTILTGLLSFMIEK 120
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQ 170
SPTLGSI +D E++QLAA+SL +NL DK FCELFP+ V++I L + +
Sbjct: 121 SPTLGSISTTDDEKKQLAAQSLEYNLKDKMFCELFPETVEAIEAELERRK 170
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|432859696|ref|XP_004069219.1| PREDICTED: ubiquitin-conjugating enzyme E2 J2-like isoform 1 [Oryzias latipes] | Back alignment and taxonomy information |
|---|
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/155 (78%), Positives = 137/155 (88%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEKTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SDY +RQL+A+SL FNL DK FCELFPD+V I
Sbjct: 133 ETSDYTKRQLSAQSLAFNLKDKVFCELFPDVVDEI 167
|
Source: Oryzias latipes Species: Oryzias latipes Genus: Oryzias Family: Adrianichthyidae Order: Beloniformes Class: Actinopterygii Phylum: Chordata Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 214 | ||||||
| UNIPROTKB|J9NYP5 | 259 | UBE2J2 "Uncharacterized protei | 0.724 | 0.598 | 0.787 | 2.2e-66 | |
| UNIPROTKB|E1BZ66 | 259 | UBE2J2 "Uncharacterized protei | 0.724 | 0.598 | 0.774 | 4.5e-66 | |
| UNIPROTKB|Q2TA03 | 259 | UBE2J2 "Ubiquitin-conjugating | 0.724 | 0.598 | 0.780 | 4.5e-66 | |
| UNIPROTKB|F1RJF5 | 259 | UBE2J2 "Uncharacterized protei | 0.724 | 0.598 | 0.780 | 4.5e-66 | |
| ZFIN|ZDB-GENE-070410-28 | 259 | ube2j2 "ubiquitin-conjugating | 0.724 | 0.598 | 0.767 | 4.5e-66 | |
| UNIPROTKB|B1AMF0 | 196 | UBE2J2 "Ubiquitin-conjugating | 0.752 | 0.821 | 0.754 | 5.8e-66 | |
| UNIPROTKB|Q8N2K1 | 259 | UBE2J2 "Ubiquitin-conjugating | 0.752 | 0.621 | 0.754 | 5.8e-66 | |
| MGI|MGI:2153608 | 259 | Ube2j2 "ubiquitin-conjugating | 0.724 | 0.598 | 0.774 | 9.4e-66 | |
| RGD|1359523 | 259 | Ube2j2 "ubiquitin-conjugating | 0.724 | 0.598 | 0.774 | 9.4e-66 | |
| UNIPROTKB|G3V8L8 | 271 | Ube2j2 "Protein Ube2j2" [Rattu | 0.724 | 0.571 | 0.774 | 9.4e-66 |
| UNIPROTKB|J9NYP5 UBE2J2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 122/155 (78%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKLVFPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLVFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKRQLAAQSLTFNLKDKVFCELFPEVVEEI 167
|
|
| UNIPROTKB|E1BZ66 UBE2J2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 120/155 (77%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPETTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E S++ +RQLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSEFAKRQLAAQSLAFNLKDKVFCELFPEVVEEI 167
|
|
| UNIPROTKB|Q2TA03 UBE2J2 "Ubiquitin-conjugating enzyme E2 J2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 121/155 (78%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKRQLAAQSLVFNLKDKVFCELFPEVVEEI 167
|
|
| UNIPROTKB|F1RJF5 UBE2J2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 121/155 (78%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKRQLAAQSLVFNLKDKVFCELFPEVVEEI 167
|
|
| ZFIN|ZDB-GENE-070410-28 ube2j2 "ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 119/155 (76%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW Y+V GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYLVRGPEKTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLA++SL FN+ DK FCELFPD+V+ I
Sbjct: 133 ETSDFTKRQLASQSLAFNIKDKVFCELFPDVVEEI 167
|
|
| UNIPROTKB|B1AMF0 UBE2J2 "Ubiquitin-conjugating enzyme E2 J2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 123/163 (75%), Positives = 140/163 (85%)
Query: 2 SSKHCGATA--RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGK 59
SSK TA RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GK
Sbjct: 5 SSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGK 64
Query: 60 LVFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
L+FPR+FPFKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE
Sbjct: 65 LIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVE 124
Query: 120 RSPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
+ PTLGSIE SD+ +RQLA +SL FNL DK FCELFP++V+ I
Sbjct: 125 KGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEI 167
|
|
| UNIPROTKB|Q8N2K1 UBE2J2 "Ubiquitin-conjugating enzyme E2 J2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 123/163 (75%), Positives = 140/163 (85%)
Query: 2 SSKHCGATA--RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGK 59
SSK TA RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GK
Sbjct: 5 SSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGK 64
Query: 60 LVFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
L+FPR+FPFKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE
Sbjct: 65 LIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVE 124
Query: 120 RSPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
+ PTLGSIE SD+ +RQLA +SL FNL DK FCELFP++V+ I
Sbjct: 125 KGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEI 167
|
|
| MGI|MGI:2153608 Ube2j2 "ubiquitin-conjugating enzyme E2J 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 120/155 (77%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ ++QLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKKQLAAQSLVFNLKDKVFCELFPEVVEEI 167
|
|
| RGD|1359523 Ube2j2 "ubiquitin-conjugating enzyme E2, J2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 120/155 (77%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ ++QLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKKQLAAQSLVFNLKDKVFCELFPEVVEEI 167
|
|
| UNIPROTKB|G3V8L8 Ube2j2 "Protein Ube2j2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 120/155 (77%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 25 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 84
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 85 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 144
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ ++QLAA+SL FNL DK FCELFP++V+ I
Sbjct: 145 ETSDFTKKQLAAQSLVFNLKDKVFCELFPEVVEEI 179
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6CMG6 | UBC6_KLULA | 6, ., 3, ., 2, ., 1, 9 | 0.5612 | 0.7196 | 0.6135 | yes | N/A |
| Q6BYG4 | UBC6_DEBHA | 6, ., 3, ., 2, ., 1, 9 | 0.5933 | 0.6962 | 0.6157 | yes | N/A |
| Q6FQK7 | UBC6_CANGA | 6, ., 3, ., 2, ., 1, 9 | 0.4827 | 0.9158 | 0.7967 | yes | N/A |
| Q54LP7 | UB2J2_DICDI | 6, ., 3, ., 2, ., 1, 9 | 0.5093 | 0.7336 | 0.6514 | yes | N/A |
| P33296 | UBC6_YEAST | 6, ., 3, ., 2, ., 1, 9 | 0.5 | 0.8457 | 0.724 | yes | N/A |
| Q2TA03 | UB2J2_BOVIN | 6, ., 3, ., 2, ., 1, 9 | 0.7806 | 0.7242 | 0.5984 | yes | N/A |
| Q9FK29 | UBC33_ARATH | 6, ., 3, ., 2, ., 1, 9 | 0.5276 | 0.7523 | 0.6625 | yes | N/A |
| Q8N2K1 | UB2J2_HUMAN | 6, ., 3, ., 2, ., 1, 9 | 0.7741 | 0.7242 | 0.5984 | yes | N/A |
| O42646 | UBC6_SCHPO | 6, ., 3, ., 2, ., 1, 9 | 0.55 | 0.7336 | 0.6916 | yes | N/A |
| Q74Z34 | UBC6_ASHGO | 6, ., 3, ., 2, ., 1, 9 | 0.5279 | 0.7383 | 0.6528 | yes | N/A |
| Q6P073 | UB2J2_MOUSE | 6, ., 3, ., 2, ., 1, 9 | 0.7741 | 0.7242 | 0.5984 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.3.2.19 | 0.946 |
| 3rd Layer | 6.3.2 | 0.963 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 214 | |||
| cd00195 | 141 | cd00195, UBCc, Ubiquitin-conjugating enzyme E2, ca | 7e-40 | |
| COG5078 | 153 | COG5078, COG5078, Ubiquitin-protein ligase [Posttr | 4e-33 | |
| pfam00179 | 139 | pfam00179, UQ_con, Ubiquitin-conjugating enzyme | 5e-33 | |
| smart00212 | 145 | smart00212, UBCc, Ubiquitin-conjugating enzyme E2, | 7e-31 | |
| PLN00172 | 147 | PLN00172, PLN00172, ubiquitin conjugating enzyme; | 4e-17 | |
| PTZ00390 | 152 | PTZ00390, PTZ00390, ubiquitin-conjugating enzyme; | 2e-13 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 2e-11 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 6e-08 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 7e-07 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 0.001 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 0.003 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 0.003 |
| >gnl|CDD|238117 cd00195, UBCc, Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 7e-40
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
RL+++ LKKDP + AEP N+LEW + GP +T YEGG++ + FP D+PFKP
Sbjct: 3 RLQKELKDLKKDPPSGISAEPVEENLLEWHGTIRGPPDTPYEGGIFKLDIEFPEDYPFKP 62
Query: 71 PSIYMIT--PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
P + +T + N ++CLS+ H W+PA+++ T+L L S + E +P
Sbjct: 63 PKVRFVTKIYHPNVDENGKICLSILKTH--GWSPAYTLRTVLLSLQSLLNEPNP 114
|
This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin protein ligase enzymes, E3. This pathway regulates many fundamental cellular processes. There are also other E2s which form thiol-ester linkages without the use of E3s as well as several UBC homologs (TSG101, Mms2, Croc-1 and similar proteins) which lack the active site cysteine essential for ubiquitination and appear to function in DNA repair pathways which were omitted from the scope of this CD. Length = 141 |
| >gnl|CDD|227410 COG5078, COG5078, Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 4e-33
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGK 59
MSS A RL ++ KL+KDP P + A P + N+ W + GP +T YEGG++
Sbjct: 1 MSSP--SALKRLLKELKKLQKDPPPGISAGPVDDDNLFHWEATITGPPDTPYEGGIFKLT 58
Query: 60 LVFPRDFPFKPPSIYMITPNGRFK--TNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
L FP D+PFKPP + T + +CL + D W+P +++ TIL L S +
Sbjct: 59 LEFPEDYPFKPPKVRFTTKIFHPNVDPSGNVCLDILK---DRWSPVYTLETILLSLQSLL 115
Query: 118 VE 119
+
Sbjct: 116 LS 117
|
Length = 153 |
| >gnl|CDD|215772 pfam00179, UQ_con, Ubiquitin-conjugating enzyme | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 5e-33
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
RL+++ +L KDP P + A P N+ EW +IGPE T YEGG++ + FP D+PFKP
Sbjct: 1 RLQKELKELLKDPPPGISAFPVDDNLFEWEVTIIGPEGTPYEGGVFKLDIEFPEDYPFKP 60
Query: 71 PSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
P + T PN + +CL + + W+PA ++ +L + S +
Sbjct: 61 PKVKFTTKIYHPN--VDPSGEICLDI--LKDENWSPALTIEQVLLSIQSLL 107
|
Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine. Length = 139 |
| >gnl|CDD|214562 smart00212, UBCc, Ubiquitin-conjugating enzyme E2, catalytic domain homologues | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 7e-31
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNP-ANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFK 69
RL ++ +L+KDP P A P N+LEW ++GP T YEGG++ + FP D+PFK
Sbjct: 1 RLLKELKELRKDPPPGFTAYPVDDENLLEWTGTIVGPPGTPYEGGVFKLTIEFPEDYPFK 60
Query: 70 PPSIYMITP--NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
PP + IT + ++ +CL + + W+PA ++ T+L L S + E
Sbjct: 61 PPKVKFITKIYHPNVDSSGEICLDIL--KQEKWSPALTLETVLLSLQSLLSE 110
|
Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. This pathway functions in regulating many fundamental processes required for cell viability.TSG101 is one of several UBC homologues that lacks this active site cysteine. Length = 145 |
| >gnl|CDD|177768 PLN00172, PLN00172, ubiquitin conjugating enzyme; Provisional | Back alignment and domain information |
|---|
Score = 74.8 bits (183), Expect = 4e-17
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT R+++++ L KDP A P+ N+ W +IGP ++ Y GG++ ++FP D+P
Sbjct: 2 ATKRIQKEHKDLLKDPPSNCSAGPSDENLFRWTASIIGPSDSPYAGGVFFLSILFPPDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
FKPP + T PN +N +CL D D W+PA +VS +L + S + + +P
Sbjct: 62 FKPPKVQFTTKIYHPN--INSNGSICL---DILRDQWSPALTVSKVLLSISSLLTDPNP 115
|
Length = 147 |
| >gnl|CDD|240397 PTZ00390, PTZ00390, ubiquitin-conjugating enzyme; Provisional | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 2e-13
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ R++++ L DP P + AEP+P N + ++ GP+ T YEGG Y +L P +P
Sbjct: 3 ISKRIEKETQNLANDPPPGIKAEPDPGNYRHFKILMEGPDGTPYEGGYYKLELFLPEQYP 62
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTIL 110
+PP + +T PN R+CL D D W+PA + T+L
Sbjct: 63 MEPPKVRFLTKIYHPN--IDKLGRICL---DILKDKWSPALQIRTVL 104
|
Length = 152 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 2e-11
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKS--LYEAHPCLQAEDIANTVEFILSSPPHVQV 212
SISPGLV+++ + +K+ YE+ PCL+ ED+AN V ++LS+PPHVQ+
Sbjct: 187 ATSISPGLVETEFAFKLHDNDPEKAAATYESIPCLKPEDVANAVLYVLSTPPHVQI 242
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 6e-08
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 20/85 (23%)
Query: 134 RRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFK----SSLGDKFDKSLYEAHP 189
R++LA +R V ISPGLV++ F ++ DK
Sbjct: 168 RQELAGTGIR---------------VTVISPGLVETTEFSTVRFEGDDERADKVYKGGTA 212
Query: 190 CLQAEDIANTVEFILSSPPHVQVSR 214
L EDIA V F + P HV ++
Sbjct: 213 -LTPEDIAEAVLFAATQPQHVNINE 236
|
Length = 246 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 7e-07
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 159 VQSISPGLVKSQI----FKSSLGDKFD-KSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213
V +I PGLV+++ F GDK +YE L EDIA T+ ++ S P HV ++
Sbjct: 176 VTNIEPGLVETEFSLVRFH---GDKEKADKVYEGVEPLTPEDIAETILWVASRPAHVNIN 232
Query: 214 R 214
Sbjct: 233 D 233
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.001
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPC----LQAEDIANTVEFILSSPPHVQV 212
V I PG V ++ + + K YE LQAEDIA V + +++P HV V
Sbjct: 177 VVVIEPGTVDTE-LRDHITHTITKEAYEERISTIRKLQAEDIAAAVRYAVTAPHHVTV 233
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 0.003
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 126 SIEMSDYERRQLAA----RSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFD 181
++ ++ Y + A R+L F+L K V +++PG VK+ S L + +
Sbjct: 143 NVRIAAYGSSKAAVNHMTRNLAFDLGPKGI------RVNAVAPGAVKTDALASVLTPEIE 196
Query: 182 KSLYEAHPCL---QAEDIANTVEFILSSPPHVQVS 213
+++ + P + EDIAN F L SP VS
Sbjct: 197 RAMLKHTPLGRLGEPEDIANAALF-LCSPASAWVS 230
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.003
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V +++PGLV + + ++ +K L A P E++A V F+ S
Sbjct: 171 VNAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLAS 220
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 214 | |||
| KOG0894|consensus | 244 | 100.0 | ||
| KOG0417|consensus | 148 | 100.0 | ||
| COG5078 | 153 | Ubiquitin-protein ligase [Posttranslational modifi | 100.0 | |
| KOG0419|consensus | 152 | 100.0 | ||
| PTZ00390 | 152 | ubiquitin-conjugating enzyme; Provisional | 100.0 | |
| PLN00172 | 147 | ubiquitin conjugating enzyme; Provisional | 100.0 | |
| KOG0426|consensus | 165 | 99.97 | ||
| KOG0421|consensus | 175 | 99.97 | ||
| KOG0424|consensus | 158 | 99.97 | ||
| KOG0425|consensus | 171 | 99.97 | ||
| KOG0418|consensus | 200 | 99.96 | ||
| PF00179 | 140 | UQ_con: Ubiquitin-conjugating enzyme; InterPro: IP | 99.96 | |
| cd00195 | 141 | UBCc Ubiquitin-conjugating enzyme E2, catalytic (U | 99.95 | |
| KOG0428|consensus | 314 | 99.95 | ||
| KOG0427|consensus | 161 | 99.94 | ||
| smart00212 | 145 | UBCc Ubiquitin-conjugating enzyme E2, catalytic do | 99.94 | |
| KOG0422|consensus | 153 | 99.93 | ||
| KOG0416|consensus | 189 | 99.88 | ||
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.87 | |
| KOG0420|consensus | 184 | 99.85 | ||
| KOG0423|consensus | 223 | 99.85 | ||
| KOG1200|consensus | 256 | 99.76 | ||
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.65 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.63 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.62 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.6 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.59 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.56 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.55 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.55 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.53 | |
| KOG1207|consensus | 245 | 99.53 | ||
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.52 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.51 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.51 | |
| KOG0895|consensus | 1101 | 99.49 | ||
| KOG1205|consensus | 282 | 99.48 | ||
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.47 | |
| KOG0725|consensus | 270 | 99.46 | ||
| PRK07985 | 294 | oxidoreductase; Provisional | 99.46 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.45 | |
| KOG0895|consensus | 1101 | 99.44 | ||
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.43 | |
| KOG4169|consensus | 261 | 99.43 | ||
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.42 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.42 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.42 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.41 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.41 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.4 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.4 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.4 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.4 | |
| KOG0896|consensus | 138 | 99.39 | ||
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.38 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.37 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.35 | |
| KOG1201|consensus | 300 | 99.33 | ||
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.33 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.33 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.32 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.31 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.31 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.29 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.28 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.28 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.28 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.28 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.26 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.26 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.26 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.25 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.24 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.24 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.23 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.23 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.23 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.22 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.2 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.19 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.19 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.18 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.18 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.18 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.18 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.18 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.17 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.16 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.15 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.14 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.13 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.13 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.12 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.12 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.09 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.08 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.06 | |
| KOG0429|consensus | 258 | 99.06 | ||
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.05 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.05 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.03 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.02 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.99 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.99 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.98 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.97 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.96 | |
| KOG1611|consensus | 249 | 98.94 | ||
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.94 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.93 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.92 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.92 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.92 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.91 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.91 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.85 | |
| KOG1209|consensus | 289 | 98.85 | ||
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.84 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.84 | |
| KOG1204|consensus | 253 | 98.84 | ||
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.84 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.83 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.82 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.8 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.79 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.78 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.77 | |
| KOG1610|consensus | 322 | 98.76 | ||
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.75 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.72 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.7 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.7 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.69 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.67 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.67 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.65 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.61 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.61 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.61 | |
| KOG1199|consensus | 260 | 98.59 | ||
| PRK08017 | 256 | oxidoreductase; Provisional | 98.55 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.54 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.54 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.53 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.51 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.5 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.48 | |
| KOG1210|consensus | 331 | 98.48 | ||
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.48 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.45 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.42 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.42 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.36 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.35 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.33 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.33 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.29 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.18 | |
| KOG1014|consensus | 312 | 98.14 | ||
| KOG0897|consensus | 122 | 98.13 | ||
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.87 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.82 | |
| KOG1208|consensus | 314 | 97.8 | ||
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.76 | |
| PF14461 | 133 | Prok-E2_B: Prokaryotic E2 family B | 97.71 | |
| PF08694 | 161 | UFC1: Ubiquitin-fold modifier-conjugating enzyme 1 | 97.6 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.48 | |
| KOG3357|consensus | 167 | 97.34 | ||
| PF05743 | 121 | UEV: UEV domain; InterPro: IPR008883 The N-termina | 97.26 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 97.1 | |
| PF05773 | 113 | RWD: RWD domain; InterPro: IPR006575 The RWD eukar | 96.97 | |
| smart00591 | 107 | RWD domain in RING finger and WD repeat containing | 96.72 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.37 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 95.62 | |
| KOG2391|consensus | 365 | 95.6 | ||
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 95.04 | |
| PF14462 | 122 | Prok-E2_E: Prokaryotic E2 family E | 92.98 | |
| KOG0309|consensus | 1081 | 91.73 | ||
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 91.21 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 90.53 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 88.49 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 87.94 | |
| KOG4018|consensus | 215 | 87.15 | ||
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 86.14 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 84.2 | |
| KOG4022|consensus | 236 | 81.94 | ||
| PF14457 | 162 | Prok-E2_A: Prokaryotic E2 family A | 81.57 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 81.48 |
| >KOG0894|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=240.71 Aligned_cols=159 Identities=66% Similarity=1.194 Sum_probs=152.8
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
+.+..+.|||+|||+.|+++|+++|.+.+..+|+.+||.+|.||+||||+||.|+..|.||++||++||.|++.||||+|
T Consensus 1 ma~k~a~kRl~keY~~l~k~Pv~~i~A~P~p~nILEWHYvl~GpedTPy~GG~YhGkl~FP~eyP~KPPaI~MiTPNGRF 80 (244)
T KOG0894|consen 1 MASKAAVKRLQKEYRALCKDPVPYIVARPNPNNILEWHYVLRGPEDTPYYGGYYHGKLIFPPEYPFKPPAITMITPNGRF 80 (244)
T ss_pred CcchHHHHHHHHHHHHHHhCCchhhccCCCccceeeeEEEeeCCCCCCccCceeeeEEeCCCCCCCCCCeeEEECCCCce
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCCCCCCCcCcHHHHHHHHHHHHHhhccCcchhhhCcccccc
Q psy818 83 KTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQS 161 (214)
Q Consensus 83 h~ng~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v~i~S~a~~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~ 161 (214)
.+|-++|+++.|+.++.|+++|.|..++..++.+|.+.++..||+....+.....|..++.+.+.+..+++++|..|..
T Consensus 81 ktntRLCLSiSDfHPdsWNP~WsVStILtGLlSFM~e~~pTtGSI~tS~~~kr~lA~~SlaFN~kn~~F~~lFPE~Vee 159 (244)
T KOG0894|consen 81 KTNTRLCLSISDFHPDSWNPGWSVSTILTGLLSFMTEDSPTTGSIETSDQDKRMLAKSSLAFNLKNPKFCELFPEVVEE 159 (244)
T ss_pred ecCceEEEeccccCcCcCCCcccHHHHHHHHHHHHhcCCCccCcccccHHHHHHHHHhhhhhccCChHHHHHhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999885543
|
|
| >KOG0417|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=222.84 Aligned_cols=109 Identities=33% Similarity=0.772 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC--
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN-- 85 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n-- 85 (214)
+.+||.||+++|++++++||++.++++|+++|+++|.||.|||||||+|++.|.||++||++||+|+|.|+ |||||
T Consensus 2 a~~RI~kE~~~l~~dp~~~~~~~~~~dnl~~w~a~I~GP~~SpYEgG~F~l~I~~p~~YP~~PPkV~F~Tk--IyHPNI~ 79 (148)
T KOG0417|consen 2 ASKRIIKELQDLLRDPPPGCSAGPVGDNLFHWQATILGPPGSPYEGGVFFLEIHFPEDYPFKPPKVRFLTK--IYHPNID 79 (148)
T ss_pred cHHHHHHHHHHHhcCCCCCCccCCCCCceeeEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCceEeecc--cccCCcC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999 99998
Q ss_pred --CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 --TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 --g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.||++++. ++|++.++++.++.+++.+|.+++
T Consensus 80 ~~G~IclDILk---~~WsPAl~i~~VllsI~sLL~~Pn 114 (148)
T KOG0417|consen 80 SNGRICLDILK---DQWSPALTISKVLLSICSLLSDPN 114 (148)
T ss_pred ccccchHHhhh---ccCChhhHHHHHHHHHHHHhcCCC
Confidence 899999986 679999999999999999999987
|
|
| >COG5078 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=222.39 Aligned_cols=118 Identities=36% Similarity=0.691 Sum_probs=108.8
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCC-CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPA-NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
+++.+.+||++|++.|++++++++++.+.++ |+++|+++|.||++||||||+|++.|.||++||++||+|+|.++ +|
T Consensus 2 ~s~~a~~RL~kE~~~l~~~~~~~~~a~p~~d~~l~~w~~~i~GP~dtpYegg~f~~~l~fP~~YP~~PPkv~F~t~--i~ 79 (153)
T COG5078 2 SSPSALKRLLKELKKLQKDPPPGISAGPVDDDNLFHWEATITGPPDTPYEGGIFKLTLEFPEDYPFKPPKVRFTTK--IF 79 (153)
T ss_pred CchhHHHHHHHHHHHHhcCCCCceEEEECCCCcceeEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeeccC--Cc
Confidence 3445999999999999999999999999988 99999999999999999999999999999999999999999999 99
Q ss_pred cCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCCCCCCCc
Q psy818 83 KTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIE 128 (214)
Q Consensus 83 h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v~i~S~a 128 (214)
||| |.+|+++++ ++|++++++..++..++.+|.++ |..|-+
T Consensus 80 HPNV~~~G~vCLdIL~---~~WsP~~~l~sILlsl~slL~~P--N~~~Pl 124 (153)
T COG5078 80 HPNVDPSGNVCLDILK---DRWSPVYTLETILLSLQSLLLSP--NPDSPL 124 (153)
T ss_pred CCCcCCCCCChhHHHh---CCCCccccHHHHHHHHHHHHcCC--CCCCCC
Confidence 997 899999987 89999999999999999999884 444443
|
|
| >KOG0419|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=199.63 Aligned_cols=113 Identities=33% Similarity=0.716 Sum_probs=107.7
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
|+..|.+||++|+++|+++++.|++..|.++|+++|.+.|.||.+|||+||+|+|.|.|+++||.+||.|+|.+. +||
T Consensus 1 MstpArrrLmrDfkrlqedpp~gisa~P~~~niM~W~a~I~Gp~~tp~e~gtFkLtl~FteeYpnkPP~VrFvs~--mFH 78 (152)
T KOG0419|consen 1 MSTPARRRLMRDFKRLQEDPPAGISAAPVENNIMEWNAVIFGPQDTPFEGGTFKLTLEFTEEYPNKPPTVRFVSK--MFH 78 (152)
T ss_pred CCchHHHHHHHHHHHhhcCCCCCccCCCCccceeeeeeeEEcCCCCCcCCceEEEEEEcccccCCCCCeeEeeee--ccC
Confidence 577899999999999999999999999999999999999999999999999999999999999999999999998 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.+|+++++ ..|++.+++..++.+++.++.+++
T Consensus 79 PNvya~G~iClDiLq---NrWsp~Ydva~ILtsiQslL~dPn 117 (152)
T KOG0419|consen 79 PNVYADGSICLDILQ---NRWSPTYDVASILTSIQSLLNDPN 117 (152)
T ss_pred CCcCCCCcchHHHHh---cCCCCchhHHHHHHHHHHHhcCCC
Confidence 87 999999986 689999999999999999998765
|
|
| >PTZ00390 ubiquitin-conjugating enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=203.45 Aligned_cols=109 Identities=31% Similarity=0.710 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC--
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN-- 85 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n-- 85 (214)
+.|||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ +||||
T Consensus 3 ~~kRl~~E~~~l~~~~~~~i~~~~~~~d~~~w~~~i~GP~~tpY~gg~f~~~i~~p~~YP~~pP~v~F~t~--i~HPNV~ 80 (152)
T PTZ00390 3 ISKRIEKETQNLANDPPPGIKAEPDPGNYRHFKILMEGPDGTPYEGGYYKLELFLPEQYPMEPPKVRFLTK--IYHPNID 80 (152)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEECCCCccEEEEEEEcCCCCCCcCcEEEEEEECccccCCCCCEEEEecC--CeeceEC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred --CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 --TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 --g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. ++|++.+++..++.+++.+|..++
T Consensus 81 ~~G~iCl~iL~---~~W~p~~ti~~iL~~i~~ll~~P~ 115 (152)
T PTZ00390 81 KLGRICLDILK---DKWSPALQIRTVLLSIQALLSAPE 115 (152)
T ss_pred CCCeEECccCc---ccCCCCCcHHHHHHHHHHHHhCCC
Confidence 899999875 789999999999999999998865
|
|
| >PLN00172 ubiquitin conjugating enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=201.99 Aligned_cols=109 Identities=34% Similarity=0.756 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC--
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN-- 85 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n-- 85 (214)
+.+||++|+++|++++++++++.++++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|+ +||||
T Consensus 2 a~~Rl~kE~~~l~~~~~~~~~~~~~~~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPNv~ 79 (147)
T PLN00172 2 ATKRIQKEHKDLLKDPPSNCSAGPSDENLFRWTASIIGPSDSPYAGGVFFLSILFPPDYPFKPPKVQFTTK--IYHPNIN 79 (147)
T ss_pred hHHHHHHHHHHHHhCCCCCeEEEECCCChheEEEEEECCCCCCCCCCEEEEEEECCcccCCCCCEEEEecC--cccceEC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999 88986
Q ss_pred --CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 --TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 --g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. ++|++.+++..++.++..+|.+++
T Consensus 80 ~~G~iCl~il~---~~W~p~~ti~~il~~i~~ll~~P~ 114 (147)
T PLN00172 80 SNGSICLDILR---DQWSPALTVSKVLLSISSLLTDPN 114 (147)
T ss_pred CCCEEEcccCc---CCCCCcCcHHHHHHHHHHHHhCCC
Confidence 899999875 689999999999999999998765
|
|
| >KOG0426|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=181.06 Aligned_cols=116 Identities=33% Similarity=0.689 Sum_probs=105.1
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeec-CCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPN-PANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~-~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
|+..++|||++||++|.+++|+||.+.|. ++|+++|.|.|.||++|+|+||.|-.++.||.|||..||+++|.-- +|
T Consensus 1 m~~~AlkRLm~EykqLt~~~P~GIvAgP~~EdnfF~W~cLI~GP~~T~f~~GvfpA~l~FP~DYPLsPPkm~Ftc~--~f 78 (165)
T KOG0426|consen 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPINEDNFFEWECLIQGPEDTCFEGGVFPARLSFPLDYPLSPPKMRFTCE--MF 78 (165)
T ss_pred CchhHHHHHHHHHHHHccCCCCcceeCCCCccceeeeeeeeeCCCCCcccCCccceeeecCCCCCCCCCceeeecc--cc
Confidence 45679999999999999999999999877 5789999999999999999999999999999999999999999876 88
Q ss_pred cCC----CceeeecC----------CCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 83 KTN----TRLCLSMS----------DFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 83 h~n----g~ic~~~l----------~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
||| |.+|.+++ +++.+.|+++..+..++..+..++.+++
T Consensus 79 HPNiy~dG~VCISILHaPGDDP~~YEls~ERWSPVQSvEKILLSV~SMLaEPN 131 (165)
T KOG0426|consen 79 HPNIYPDGRVCISILHAPGDDPMGYELSAERWSPVQSVEKILLSVVSMLAEPN 131 (165)
T ss_pred cCcccCCCeEEEEEeeCCCCCCccchhhhhcCChHHHHHHHHHHHHHHHcCCC
Confidence 887 99999876 3455789999999999999999887754
|
|
| >KOG0421|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=184.52 Aligned_cols=117 Identities=33% Similarity=0.640 Sum_probs=108.4
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecC
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT 84 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ 84 (214)
.+...|||++||..|.-...+||++.|+++|++.|..+|.||++|+|+|-.|++.+.||.+||++||+|+|+|| .|||
T Consensus 27 ~~~V~KRLq~ELm~Lmms~~~gISAFP~~dnlf~WvGtItGp~dTvyegl~yklSl~Fp~~YPy~pP~vkFltp--c~HP 104 (175)
T KOG0421|consen 27 GHSVTKRLQSELMGLMMSNTPGISAFPESDNLFKWVGTITGPKDTVYEGLKYKLSLSFPNNYPYKPPTVKFLTP--CFHP 104 (175)
T ss_pred CchHHHHHHHHHHHHHhcCCCCcccCcCcCceeEEeeEeeCCCCccccCcEEEEEEecCCCCCCCCCeeEeecc--ccCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred C----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCCCCCCCc
Q psy818 85 N----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIE 128 (214)
Q Consensus 85 n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v~i~S~a 128 (214)
| |.||++|+. +.|+..++|..++..++.++-++ |++|--
T Consensus 105 NVD~~GnIcLDILk---dKWSa~YdVrTILLSiQSLLGEP--Nn~SPL 147 (175)
T KOG0421|consen 105 NVDLSGNICLDILK---DKWSAVYDVRTILLSIQSLLGEP--NNSSPL 147 (175)
T ss_pred CccccccchHHHHH---HHHHHHHhHHHHHHHHHHHhCCC--CCCCcc
Confidence 9 899999886 89999999999999999988664 455543
|
|
| >KOG0424|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-30 Score=180.33 Aligned_cols=122 Identities=30% Similarity=0.522 Sum_probs=109.4
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNP-----ANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
||..++.||+.|-+.+.++.+-|++++|.. .|++.|+|.|.|++||+||||.|.+.+.||++||++||+++|.+|
T Consensus 1 ~s~~~~~rl~eErk~wrk~hp~gf~AkP~~~~dg~~nl~~Wec~IPG~~~t~wEGg~y~l~v~F~~dyP~~PPkckF~~p 80 (158)
T KOG0424|consen 1 MSGIALNRLAEERKKWRKDHPFGFYAKPVKNADGTLNLMNWECGIPGKKGTPWEGGLYKLTVNFPDDYPSSPPKCKFKPP 80 (158)
T ss_pred CcchHHHHHHHHHHHHhhcCCCceeeeccCCCCCcceeEEEEeecCCCCCCcCcCceEEEEEeCCccCCCCCCccccCCC
Confidence 467789999999999999999999998874 379999999999999999999999999999999999999999999
Q ss_pred CceecCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCCCCCCCcCc
Q psy818 79 NGRFKTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMS 130 (214)
Q Consensus 79 ~~~~h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v~i~S~a~~ 130 (214)
+|||| |.||+++++- ..+|++.+++.+++..++.+|.. +|+.|.|-.
T Consensus 81 --l~HPNVypsgtVcLsiL~e-~~~W~paitikqiL~gIqdLL~~--Pn~~~pAq~ 131 (158)
T KOG0424|consen 81 --LFHPNVYPSGTVCLSILNE-EKDWRPAITIKQILLGIQDLLDT--PNITSPAQT 131 (158)
T ss_pred --CcCCCcCCCCcEehhhhcc-ccCCCchhhHHHHHHHHHHHhcC--CCCCCchhh
Confidence 99998 8999999873 34699999999999999999866 456666643
|
|
| >KOG0425|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=183.04 Aligned_cols=122 Identities=27% Similarity=0.558 Sum_probs=107.8
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCC-CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPA-NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
+..+..-|+++|++|++++.+|+++.+.++ |+++|.+.|.||++|+||||.|+..+.||.|||++||+++|.++ +||
T Consensus 3 ~~~a~~ll~~qlk~L~~~pv~gf~~glvd~~dif~WeV~i~gppdTlYeGG~FkA~m~FP~dYP~sPP~~rF~s~--mwH 80 (171)
T KOG0425|consen 3 SSQASLLLLKQLKELQEEPVEGFSVGLVDDSDIFEWEVAIIGPPDTLYEGGFFKAHMKFPQDYPLSPPTFRFTSK--MWH 80 (171)
T ss_pred cchhHHHHHHHHHHHhcCCCCccccccccCCceeEEEEEEEcCCCccccCceeEEEEeCcccCCCCCCceeeehh--hcC
Confidence 344788899999999999999999987765 99999999999999999999999999999999999999999999 999
Q ss_pred CC----CceeeecCCC----------CCCCCcCcccHHHHHHHHHHhhccCCCCCCCCcCc
Q psy818 84 TN----TRLCLSMSDF----------HPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMS 130 (214)
Q Consensus 84 ~n----g~ic~~~l~~----------~~e~w~~~~~vn~~l~a~~~~m~~~~v~i~S~a~~ 130 (214)
|| |.+|.+|+.- ..|.|.++.++..++..++.+|.+ +|+.|-|..
T Consensus 81 PNvy~~G~vCISILH~pgdD~~gyE~~~erW~Pv~tvetIllSiIsmL~~--PN~~SPANV 139 (171)
T KOG0425|consen 81 PNVYEDGDVCISILHPPGDDPSGYELPSERWLPVQTVETILLSIISMLNS--PNDESPANV 139 (171)
T ss_pred CCcCCCCCEEEEeecCCCCCcccCCChhhccCCccchhHhHHHHHHHHcC--CCCCCccch
Confidence 97 9999997732 235799999999999999998866 566676633
|
|
| >KOG0418|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=187.88 Aligned_cols=137 Identities=27% Similarity=0.504 Sum_probs=113.6
Q ss_pred chHHHHHHHHHHHHHhcCC---CCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCce
Q psy818 5 HCGATARLKQDYMKLKKDP---IPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGR 81 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~---~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~ 81 (214)
+. +.+||++|++++.+++ ..||.+...++|+.+....|.||+|||||||+|.++|++|++|||+||+|+|.|+ |
T Consensus 2 ~~-~~~ri~~e~k~v~~~~eisq~~I~ve~vn~~~~~ikG~I~GP~~TPYEGG~FeldI~iPe~YPF~pPkv~F~Tk--I 78 (200)
T KOG0418|consen 2 SN-AFKRINREQKEVLDDPEISQAGIIVEMVNENLKEIKGHIAGPEDTPYEGGVFELDIKIPENYPFKPPKVKFITK--I 78 (200)
T ss_pred cc-HHHHHHHHHHHhccChhhhhcceEEEEccCChhhceeEecCCCCCCCCCceEEEEEecCCCCCCCCCceeeeee--e
Confidence 44 8999999999999988 5699999999999999999999999999999999999999999999999999999 9
Q ss_pred ecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCCC------CCCCcCcHHHHHHHHHHHHHhhcc
Q psy818 82 FKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT------LGSIEMSDYERRQLAARSLRFNLN 147 (214)
Q Consensus 82 ~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v~------i~S~a~~~Y~a~K~a~~~~~~~l~ 147 (214)
|||| |.||++++. ++|.+.+++..++..++.+|..+.+. +.+..-..|..-+.-.+-+|...+
T Consensus 79 wHPnVSs~tGaICLDilk---d~Wa~slTlrtvLislQalL~~pEp~dPqDavva~qy~~n~~~F~~TAr~WT~~fA 152 (200)
T KOG0418|consen 79 WHPNVSSQTGAICLDILK---DQWAASLTLRTVLISLQALLCAPEPKDPQDAVVAEQYVDNYEMFYKTARYWTTEFA 152 (200)
T ss_pred ecCCCCcccccchhhhhh---cccchhhhHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 9998 899998775 89999999998888888888765521 111111245444444455555554
|
|
| >PF00179 UQ_con: Ubiquitin-conjugating enzyme; InterPro: IPR000608 The post-translational attachment of ubiquitin (IPR000626 from INTERPRO) to proteins (ubiquitinylation) alters the function, location or trafficking of a protein, or targets it to the 26S proteasome for degradation [, , ] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=181.67 Aligned_cols=107 Identities=36% Similarity=0.893 Sum_probs=95.5
Q ss_pred HHHHHHHHHhcCCCCCeEEeecCC-CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC----
Q psy818 11 RLKQDYMKLKKDPIPYVIAEPNPA-NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN---- 85 (214)
Q Consensus 11 rl~~e~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n---- 85 (214)
||++|+++|+++++.|+.+.+.++ |+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 1 Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~YP~~pP~v~f~t~--i~HPni~~~ 78 (140)
T PF00179_consen 1 RLQKELKELQKNPPPGISVQPSEDDNLFEWHVTIFGPPGTPYEGGIFKFRISFPPDYPFSPPKVRFLTP--IFHPNIDEN 78 (140)
T ss_dssp HHHHHHHHHHHSHTTTEEEEEESTTETTEEEEEEEBETTSTTTTSEEEEEEEETTTTTTS--EEEESSS---SBTTB-TT
T ss_pred CHHHHHHHHhhCCCCCEEEEECCCCChheEEEEEeccCccceecccccccccccccccccccccccccc--ccccccccc
Confidence 899999999999999999998886 99999999999999999999999999999999999999999998 89987
Q ss_pred CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. .+.|++.+++..++.++..+|.++.
T Consensus 79 G~icl~~l~--~~~W~p~~~i~~il~~i~~ll~~p~ 112 (140)
T PF00179_consen 79 GRICLDILN--PESWSPSYTIESILLSIQSLLSEPN 112 (140)
T ss_dssp SBBGHGGGT--TTTC-TTSHHHHHHHHHHHHHHSTC
T ss_pred ccchhhhhh--cccCCcccccccHHHHHHHHHhCCC
Confidence 899998764 3459999999999999999997663
|
Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade []. The E1 enzyme mediates an ATP-dependent transfer of a thioester-linked ubiquitin molecule to a cysteine residue on the E2 enzyme. The E2 enzyme (6.3.2.19 from EC) then either transfers the ubiquitin moiety directly to a substrate, or to an E3 ligase, which can also ubiquitinylate a substrate. There are several different E2 enzymes (over 30 in humans), which are broadly grouped into four classes, all of which have a core catalytic domain (containing the active site cysteine), and some of which have short N- and C-terminal amino acid extensions: class I enzymes consist of just the catalytic core domain (UBC), class II possess a UBC and a C-terminal extension, class III possess a UBC and an N-terminal extension, and class IV possess a UBC and both N- and C-terminal extensions. These extensions appear to be important for some subfamily function, including E2 localisation and protein-protein interactions []. In addition, there are proteins with an E2-like fold that are devoid of catalytic activity, but which appear to assist in poly-ubiquitin chain formation.; GO: 0016881 acid-amino acid ligase activity; PDB: 2AAK_A 3SY2_C 1FBV_C 3SQV_C 1C4Z_D 1JAT_B 2GMI_B 2H2Y_D 2R0J_A 3E95_B .... |
| >cd00195 UBCc Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=177.53 Aligned_cols=108 Identities=39% Similarity=0.793 Sum_probs=100.4
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC----
Q psy818 10 ARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN---- 85 (214)
Q Consensus 10 ~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n---- 85 (214)
|||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.++ +||+|
T Consensus 2 ~Rl~~E~~~l~~~~~~~~~v~~~~~~~~~w~~~i~g~~~t~y~g~~~~~~~~~p~~yP~~pP~v~f~~~--i~HpnV~~~ 79 (141)
T cd00195 2 KRLQKELKDLKKDPPSGISAEPVEENLLEWHGTIRGPPDTPYEGGIFKLDIEFPEDYPFKPPKVRFVTK--IYHPNVDEN 79 (141)
T ss_pred chHHHHHHHHHhCCCCCeEEEECCCChhEEEEEEecCCCCCccCCEEEEEEECCCccCCCCCeEEEeCC--cccCCCCCC
Confidence 799999999999999999999999999999999999999999999999999999999999999999988 88886
Q ss_pred CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|+++++. +.|++.+++..++.++..+|.++.
T Consensus 80 G~icl~~l~~--~~W~p~~~l~~il~~i~~~l~~p~ 113 (141)
T cd00195 80 GKICLSILKT--HGWSPAYTLRTVLLSLQSLLNEPN 113 (141)
T ss_pred CCCchhhcCC--CCcCCcCcHHHHHHHHHHHHhCCC
Confidence 8999998752 359999999999999999998654
|
This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin protein ligase enzymes, E3. This pathway regulates many fundamental cellular processes. There are also other E2s which form thiol-ester linkages without the use of E3s as well as several UBC homologs (TSG101, Mms2, Croc-1 and similar proteins) which lack the active site cysteine essential for ubiquitination and appear to function in DNA repair pathways which were omitted from the scope of this CD. |
| >KOG0428|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=183.10 Aligned_cols=127 Identities=43% Similarity=0.937 Sum_probs=115.1
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
+..+.+.|||++|.++|+ +|-..+...+.++|+++|+++|.||.||-||||+||.+|.||.|||++||.+..+||||.|
T Consensus 7 N~KnpaVkRlmkEa~El~-~Ptd~yha~plEdNlFEWhFtiRGp~dtdFeGGiYHGRI~lPadYPmKPPs~iLLTpNGRF 85 (314)
T KOG0428|consen 7 NLKNPAVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTIRGPPDTDFEGGIYHGRIVLPADYPMKPPSIILLTPNGRF 85 (314)
T ss_pred cccCHHHHHHHHHHHHhc-CchhhhhhccchhceeeEEEEeeCCCCCCccCceeeeeEecCCCCCCCCCeEEEEcCCCce
Confidence 346789999999999998 6777778899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeeecCCCCCCCCcCcccHHHHHHHHHHhhccC-CCCCCCCcCc
Q psy818 83 KTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER-SPTLGSIEMS 130 (214)
Q Consensus 83 h~ng~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~-~v~i~S~a~~ 130 (214)
..|-.||+++....+|.|.+.|.+...+.+++.+|-.. +-.+||+.-.
T Consensus 86 E~nkKiCLSISgyHPEtWqPSWSiRTALlAlIgFmPt~p~GAlGSlDYp 134 (314)
T KOG0428|consen 86 EVNKKICLSISGYHPETWQPSWSIRTALLALIGFMPTKPEGALGSLDYP 134 (314)
T ss_pred eeCceEEEEecCCCccccCcchhHHHHHHHHHccccCCCCCccccCcCC
Confidence 99999999999999999999999999999999988544 3556776633
|
|
| >KOG0427|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=159.21 Aligned_cols=111 Identities=25% Similarity=0.528 Sum_probs=101.0
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcC---Cce
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITP---NGR 81 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~---~~~ 81 (214)
+..+.+||+|||.++|.+||.|+... ..+|+.+|.+.+.|.+||.|+|.+|.|.++||+.||++.|.|.|..+ +.+
T Consensus 13 s~~at~RLqKEl~e~q~~pP~G~~~~-v~dnlqqWii~v~Ga~GTLYa~e~~qLq~~F~~~YP~esPqVmF~~~~P~HPH 91 (161)
T KOG0427|consen 13 SKIATNRLQKELSEWQNNPPTGFKHR-VTDNLQQWIIEVTGAPGTLYANETYQLQVEFPEHYPMESPQVMFVGPAPLHPH 91 (161)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcceee-cccchheeEEEEecCCceeecCcEEEEEEecCCCCCCCCCeEEEecCCCCCCc
Confidence 35688999999999999999999888 78999999999999999999999999999999999999999999985 235
Q ss_pred ecCCCceeeecCCCCCCCCcCcccHHHHHHHHHHhhcc
Q psy818 82 FKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119 (214)
Q Consensus 82 ~h~ng~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~ 119 (214)
.+.||.||++++. ++|.+.+.++.++..++.++..
T Consensus 92 iYSNGHICL~iL~---d~WsPAmsv~SvClSIlSMLSS 126 (161)
T KOG0427|consen 92 IYSNGHICLDILY---DSWSPAMSVQSVCLSILSMLSS 126 (161)
T ss_pred eecCCeEEEEeec---ccCCcchhhHHHHHHHHHHHcc
Confidence 5679999999875 8899999999999999987754
|
|
| >smart00212 UBCc Ubiquitin-conjugating enzyme E2, catalytic domain homologues | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-26 Score=169.04 Aligned_cols=108 Identities=37% Similarity=0.754 Sum_probs=98.9
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecCC-CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC---
Q psy818 10 ARLKQDYMKLKKDPIPYVIAEPNPA-NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN--- 85 (214)
Q Consensus 10 ~rl~~e~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n--- 85 (214)
+||++|++++++++++|+.+.+.++ |+++|+++|.||++|||+||.|++.|.||++||++||+|+|.++ +||+|
T Consensus 1 ~Rl~~E~~~~~~~~~~~~~v~~~~~~~~~~w~~~i~gp~~~~y~g~~f~~~l~~p~~yP~~pP~v~f~~~--i~Hp~i~~ 78 (145)
T smart00212 1 KRLLKELKELLKDPPPGISAYPVDEDNLLEWTGTIVGPPGTPYEGGIFKLTIEFPPDYPFKPPKVKFITK--IYHPNVDS 78 (145)
T ss_pred ChHHHHHHHHHhCCCCCeEEEECCCCChheEEEEEEcCCCCCcCCcEEEEEEECCcccCCCCCEEEEeCC--ceEeeECC
Confidence 5999999999999999999888765 99999999999999999999999999999999999999999998 78875
Q ss_pred -CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 -TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 -g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. .+.|++.+++..++..+..+|.++.
T Consensus 79 ~G~icl~~l~--~~~W~p~~~l~~il~~i~~~l~~p~ 113 (145)
T smart00212 79 SGEICLDILK--QEKWSPATTLETVLLSIQSLLSEPN 113 (145)
T ss_pred CCCEehhhcC--CCCCCCCCcHHHHHHHHHHHHhCCC
Confidence 999999764 2689999999999999999887754
|
Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. This pathway functions in regulating many fundamental processes required for cell viability.TSG101 is one of several UBC homologues that lacks this active site cysteine. |
| >KOG0422|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-26 Score=160.21 Aligned_cols=110 Identities=28% Similarity=0.659 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCeE-EeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC
Q psy818 7 GATARLKQDYMKLKKDPIPYVI-AEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~-~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n 85 (214)
.+.+||+||+.+|++++...+. +..++.|++.|.+.|. |.+-||..|.|+++|.||.+|||+||+|+|.|+ +||+|
T Consensus 2 ~a~~Rl~kEL~dl~~~~~~~~rn~~~~e~nll~wt~lli-pd~ppY~kgaF~l~I~fp~eYPFKPP~i~f~tk--iYHpN 78 (153)
T KOG0422|consen 2 AAPRRLRKELADLQKNKMKFFRNIEVDEANLLKWTGLLI-PDKPPYNKGAFRLEIDFPVEYPFKPPKIKFKTK--IYHPN 78 (153)
T ss_pred chhHHHHHHHHHHHhccHHHHhhhhcccccceeEEeEec-CCCCCccCcceEEEeeCCCCCCCCCCeeeeeee--eccCC
Confidence 4789999999999999877554 3556789999999999 899999999999999999999999999999999 99998
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. .|.|.+...+.+++++++.++.++.
T Consensus 79 VDe~gqvClPiis--~EnWkP~T~teqVlqaLi~liN~P~ 116 (153)
T KOG0422|consen 79 VDEKGQVCLPIIS--AENWKPATRTEQVLQALIALINDPE 116 (153)
T ss_pred CCCCCceeeeeee--cccccCcccHHHHHHHHHHHhcCCC
Confidence 899999864 5899999999999999999998876
|
|
| >KOG0416|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-23 Score=149.62 Aligned_cols=104 Identities=27% Similarity=0.596 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC--
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN-- 85 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n-- 85 (214)
..|||..|...|..... .+..+++++.+++|.+.||++|||+||+|++++.+|++||++.|+|.|.++ |||||
T Consensus 4 ~~rRid~Dv~KL~~s~y---eV~~ind~m~ef~V~f~GP~ds~YegGvWkv~V~lPd~YP~KSPSIGFvnK--IfHPNID 78 (189)
T KOG0416|consen 4 GKRRIDTDVMKLLMSDY---EVTIINDGMQEFYVKFHGPKDSPYEGGVWKVRVELPDNYPFKSPSIGFVNK--IFHPNID 78 (189)
T ss_pred cccchhhHHHHHHhcCC---eEEEecCcccEEEEEeeCCCCCcccCceEEEEEECCCCCCCCCCcccceee--ccCCCch
Confidence 45899999999876443 466678889999999999999999999999999999999999999999999 99999
Q ss_pred ---CceeeecCCCCCCCCcCcccHHHHHHHHHHhhcc
Q psy818 86 ---TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119 (214)
Q Consensus 86 ---g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~ 119 (214)
|.+|++... ..|++++++-.+.-.++|.+..
T Consensus 79 e~SGsVCLDViN---QtWSp~yDL~NIfetfLPQLL~ 112 (189)
T KOG0416|consen 79 EASGSVCLDVIN---QTWSPLYDLVNIFETFLPQLLR 112 (189)
T ss_pred hccCccHHHHHh---hhhhHHHHHHHHHHHHhHHHhc
Confidence 899999765 5799999999999999998864
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6e-23 Score=161.09 Aligned_cols=131 Identities=29% Similarity=0.398 Sum_probs=105.9
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++| |+|+- .++.+.+.++|+.++++| +.+++++|.|.+++ +|+||++|. .||++|+++.
T Consensus 83 DiLvN-NAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~ 161 (246)
T COG4221 83 DILVN-NAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVR 161 (246)
T ss_pred cEEEe-cCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHH
Confidence 43444 55443 347778889999999999 67999999999886 899999987 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCc---hhhHhHHhhCCCCChHhHHHHHHHHhcCCCccccCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD---KFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVSR 214 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~~ 214 (214)
+|+..|| .++.+. ||.+|+||.+.|..+...... ....+.+....+++|||||++|+|.+++|.|++|+|
T Consensus 162 ~fs~~LR----~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~vnI~e 236 (246)
T COG4221 162 AFSLGLR----QELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHVNINE 236 (246)
T ss_pred HHHHHHH----HHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCccccce
Confidence 9999999 777554 999999999977655433222 233444556668999999999999999999999986
|
|
| >KOG0420|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=142.36 Aligned_cols=109 Identities=27% Similarity=0.596 Sum_probs=92.0
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEe-ec-CCCcc--cEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCc
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAE-PN-PANIL--EWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNG 80 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~-~~-~~~~~--~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~ 80 (214)
.+.++-||++|+.++.- |++++.. ++ .+++. +++++|. |+++.|+||.|.|.+.+|+.||++||+|+|+|+
T Consensus 26 ~s~a~lrl~~di~elnL--p~t~~~s~~~~~~d~~~~~~elti~-PdEGyY~gGkf~F~~~v~~~Yp~~PPKVkCltk-- 100 (184)
T KOG0420|consen 26 VSAALLRLKKDILELNL--PPTCSLSFPDSPDDLNNLEFELTIT-PDEGYYQGGKFRFKFKVPNAYPHEPPKVKCLTK-- 100 (184)
T ss_pred ccHHHHHHHhhhhhccC--CCccccccccCCcccccceEEEEEc-cCcceecCceEEEEEECCCCCCCCCCeeeeeec--
Confidence 35677788888888755 6666532 22 23443 5999998 999999999999999999999999999999999
Q ss_pred eecCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 81 RFKTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 81 ~~h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
+|||| |.+|+.|+. ++|+|+.++|.++..+..++.++.
T Consensus 101 V~HPNId~~GnVCLnILR---edW~P~lnL~sIi~GL~~LF~epn 142 (184)
T KOG0420|consen 101 VYHPNIDLDGNVCLNILR---EDWRPVLNLNSIIYGLQFLFLEPN 142 (184)
T ss_pred cccCCcCCcchHHHHHHH---hcCccccchHHHHHHHHHHhccCC
Confidence 99998 999999986 789999999999999999988865
|
|
| >KOG0423|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=4e-22 Score=145.58 Aligned_cols=111 Identities=24% Similarity=0.530 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
-.+|.|.+|++.|...||.||.+.++++|++...+.|.||.||||++|.|++.+.+..|||.+||+-.|+|+ |||||
T Consensus 10 ~vik~~~kEl~~l~~~PPdGIKV~~NeeD~tdiqa~IeGP~GTPYa~GlFRmKL~L~kDFP~sPPKgYFlTK--IFHPNV 87 (223)
T KOG0423|consen 10 NVIKQLAKELKSLDESPPDGIKVVVNEEDFTDIQADIEGPVGTPYANGLFRMKLALSKDFPHSPPKGYFLTK--IFHPNV 87 (223)
T ss_pred HHHHHHHHHHHhcccCCCCceEEecChHHhHHHHhhccCCCCCccccceeeehhhhcCCCCCCCCcceeeee--eccCCc
Confidence 467889999999999999999999999999999999999999999999999999999999999999999999 99996
Q ss_pred ---CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCC
Q psy818 86 ---TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122 (214)
Q Consensus 86 ---g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v 122 (214)
|.||...+. .+|.+.+.+.+++..+..+++.+.+
T Consensus 88 aaNGEICVNtLK---kDW~p~LGirHvLltikCLLI~PnP 124 (223)
T KOG0423|consen 88 AANGEICVNTLK---KDWNPSLGIRHVLLTIKCLLIEPNP 124 (223)
T ss_pred ccCceehhhhhh---cccCcccchhhHhhhhheeeecCCh
Confidence 899998765 7899999999998888888888763
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-19 Score=136.53 Aligned_cols=128 Identities=18% Similarity=0.237 Sum_probs=97.1
Q ss_pred EcCCceecCCCceeee--cCCCCCCCCcCcccHH-----HHHHHHHHhhcc--CC----CCCCCCcCc-------HHHHH
Q psy818 76 ITPNGRFKTNTRLCLS--MSDFHPDTWNPAWSVS-----TILTGLLSFMVE--RS----PTLGSIEMS-------DYERR 135 (214)
Q Consensus 76 ~t~~~~~h~ng~ic~~--~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~--~~----v~i~S~a~~-------~Y~a~ 135 (214)
.+|+++++ +++|-.+ ++.+..++|+.++.+| .+++++.+.|.. ++ +|+||+.|. .|+|+
T Consensus 89 g~psvlVn-cAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAs 167 (256)
T KOG1200|consen 89 GTPSVLVN-CAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAAS 167 (256)
T ss_pred CCCcEEEE-cCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhh
Confidence 34554444 4556544 6678889999999999 668888877433 22 899999987 89999
Q ss_pred HHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCC---CCChHhHHHHHHHHhcCCCc
Q psy818 136 QLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 136 K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p~~ 209 (214)
|+++.+|+++.+ .|++.. |||.|+||++.|+|.+... +....+.....| ++++||||++|+||+|.-+.
T Consensus 168 K~GvIgftktaA----rEla~knIrvN~VlPGFI~tpMT~~mp-~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ss 241 (256)
T KOG1200|consen 168 KGGVIGFTKTAA----RELARKNIRVNVVLPGFIATPMTEAMP-PKVLDKILGMIPMGRLGEAEEVANLVLFLASDASS 241 (256)
T ss_pred cCceeeeeHHHH----HHHhhcCceEeEeccccccChhhhhcC-HHHHHHHHccCCccccCCHHHHHHHHHHHhccccc
Confidence 999999999999 777655 9999999999999987532 222333333333 56999999999999986544
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.6e-17 Score=131.28 Aligned_cols=115 Identities=14% Similarity=0.097 Sum_probs=87.3
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+.++++| .++++++++|.+.+ ++++|.++. .|+++|+|+.+|+++++ .|+.+
T Consensus 104 ~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r~la----~el~~ 179 (271)
T PRK06505 104 RYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLA----ADYGP 179 (271)
T ss_pred ChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhhHHHHHHHHHHHH----HHHhh
Confidence 45567788999999999 56889999998655 788888764 79999999999999999 78876
Q ss_pred c--cccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
. |||+|+||.++|++.......... ...... ...++|||||++++||+|.++.
T Consensus 180 ~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~ 238 (271)
T PRK06505 180 QGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSS 238 (271)
T ss_pred cCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCcccc
Confidence 4 999999999999875422111111 111111 2256999999999999996543
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.3e-16 Score=126.69 Aligned_cols=115 Identities=22% Similarity=0.145 Sum_probs=87.8
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+..+++| .++++++|+|.+.+ ++++|.++. .|+++|+|+.+|+++++ .|+.+
T Consensus 102 ~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~ 177 (252)
T PRK06079 102 NVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLA----RDLGK 177 (252)
T ss_pred CcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHHHHHHHHHHHH----HHhhh
Confidence 45667778899999999 56889999997666 788888764 79999999999999999 77766
Q ss_pred c--cccccCccchhhhhccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
. +||+|+||.++|++.......+. ....... ..+++|||||++++||+|..++
T Consensus 178 ~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~ 236 (252)
T PRK06079 178 KGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLST 236 (252)
T ss_pred cCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccc
Confidence 4 99999999999997643222211 1111111 2357999999999999987543
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.6e-16 Score=128.10 Aligned_cols=114 Identities=18% Similarity=0.145 Sum_probs=86.9
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+.++++| .++++++|.|.+++ ++++|.++. .|+++|+|+.+|+++++ .|+.+
T Consensus 102 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~ 177 (274)
T PRK08415 102 SFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLA----VDLGK 177 (274)
T ss_pred ccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhHHHHHHHHHHHHH----HHhhh
Confidence 45667778999999999 67899999998766 788888764 79999999999999999 77766
Q ss_pred c--cccccCccchhhhhccccCCchhhHhH----HhhCCCCChHhHHHHHHHHhcCCC
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGDKFDKSL----YEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~~~~~~~----~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
. |||+|+||.++|++............. ......++|||||++++||+|...
T Consensus 178 ~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~ 235 (274)
T PRK08415 178 KGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLS 235 (274)
T ss_pred cCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhh
Confidence 4 999999999999875422111111111 111235699999999999999643
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.2e-16 Score=124.99 Aligned_cols=115 Identities=15% Similarity=0.109 Sum_probs=87.2
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+.++++| .+++++.++|.+.+ ++++|.++. .|+++|+|+.+|+++++ .|+.+
T Consensus 105 ~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~ 180 (260)
T PRK06603 105 RYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLA----NDMGE 180 (260)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhHHHHHHHHHHHHH----HHhhh
Confidence 45567778999999999 56888899997666 788888754 79999999999999999 77766
Q ss_pred c--cccccCccchhhhhccccCC-chhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 157 D--LVQSISPGLVKSQIFKSSLG-DKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
. |||+|+||.++|++...... .+........ ..+++|||||++++||+|....
T Consensus 181 ~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~ 239 (260)
T PRK06603 181 NNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSK 239 (260)
T ss_pred cCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccc
Confidence 4 99999999999987542211 1111111111 2356999999999999996543
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.2e-16 Score=127.84 Aligned_cols=127 Identities=19% Similarity=0.114 Sum_probs=95.1
Q ss_pred CceecCCCc---eeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTR---LCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~---ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|. .+.++.+.+.++|+.++++| .++++++|.|+++| +|++|.++. .|+++|+|+.
T Consensus 122 DiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~ 201 (303)
T PLN02730 122 DILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALE 201 (303)
T ss_pred CEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHH
Confidence 556776542 13567788889999999999 67899999998777 788887753 6999999999
Q ss_pred HHHhhccCcchhhhCc---ccccccCccchhhhhccccCC-chhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFP---DLVQSISPGLVKSQIFKSSLG-DKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~---~~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+|+++++ .|+.+ .|||+|+||.++|++...... +......... ....+|+|||++++||+|..+.
T Consensus 202 ~l~~~la----~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~ 273 (303)
T PLN02730 202 SDTRVLA----FEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLAS 273 (303)
T ss_pred HHHHHHH----HHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999 88864 399999999999998754211 1111111111 2356999999999999996543
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.8e-16 Score=126.90 Aligned_cols=128 Identities=16% Similarity=0.034 Sum_probs=94.2
Q ss_pred CCceecCCCce---eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHH
Q psy818 78 PNGRFKTNTRL---CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAA 139 (214)
Q Consensus 78 ~~~~~h~ng~i---c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~ 139 (214)
.++++|+.|.. ..++.+++.++|+.++++| .++++++|+|++++ ++++|+++. .|+++|+|+
T Consensus 120 lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl 199 (299)
T PRK06300 120 IDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAAL 199 (299)
T ss_pred CcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHH
Confidence 35566654421 3457788889999999999 67899999998776 777776653 699999999
Q ss_pred HHHHhhccCcchhhhCc---ccccccCccchhhhhccccCCchhh-HhHHh---hCCCCChHhHHHHHHHHhcCCCc
Q psy818 140 RSLRFNLNDKNFCELFP---DLVQSISPGLVKSQIFKSSLGDKFD-KSLYE---AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~---~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~---~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.+++++++ .|+.+ .|||+|+||.++|++.......+.. ..... .....+|||||++++||+|....
T Consensus 200 ~~lt~~la----~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~ 272 (299)
T PRK06300 200 ESDTKVLA----WEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLAS 272 (299)
T ss_pred HHHHHHHH----HHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999 77754 3999999999999986432111111 11111 12356999999999999997543
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-15 Score=123.84 Aligned_cols=115 Identities=20% Similarity=0.187 Sum_probs=88.0
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+.++++| .++++++|.|.+.+ ++++|.++. .|+++|+|+.+++++++ .|+.+
T Consensus 106 ~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~ 181 (258)
T PRK07370 106 DFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLA----AELGP 181 (258)
T ss_pred cchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhHHHHHHHHHHHHHH----HHhCc
Confidence 46677788999999999 67899999998766 788888764 79999999999999999 77776
Q ss_pred c--cccccCccchhhhhccccCC-chhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 157 D--LVQSISPGLVKSQIFKSSLG-DKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
. +||+|+||.++|++...... .+........ ...++|||||++++||+|.+.+
T Consensus 182 ~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~ 240 (258)
T PRK07370 182 KNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLAS 240 (258)
T ss_pred CCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhc
Confidence 4 99999999999987543211 1111111111 2356999999999999996543
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.6e-16 Score=124.77 Aligned_cols=127 Identities=16% Similarity=0.143 Sum_probs=92.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~ 166 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAG 166 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHH
Confidence 3345543321 1235667778999999999 56899999997653 789998864 69999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC----------chhhHhHHhh---CCCCChHhHHHHHHHHhcC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG----------DKFDKSLYEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~----------~~~~~~~~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
++++++ .|+.+. |||+|+||.++|++...... ++........ ...++|||||++++||+|.
T Consensus 167 l~~~la----~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~ 242 (263)
T PRK08339 167 LVRTLA----KELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASD 242 (263)
T ss_pred HHHHHH----HHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcc
Confidence 999999 788764 99999999999997542110 1111111111 2256899999999999997
Q ss_pred CCc
Q psy818 207 PPH 209 (214)
Q Consensus 207 p~~ 209 (214)
.+.
T Consensus 243 ~~~ 245 (263)
T PRK08339 243 LGS 245 (263)
T ss_pred hhc
Confidence 543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.1e-15 Score=122.59 Aligned_cols=112 Identities=16% Similarity=0.189 Sum_probs=84.7
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc--
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD-- 157 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~-- 157 (214)
+.+.++|+..+++| .++++++|+|.+++ ++++|.++. .|+++|+|+.+++++++ .++.+.
T Consensus 107 ~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~~gI 182 (260)
T PRK06997 107 GLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLA----VSLGPKGI 182 (260)
T ss_pred hcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHH----HHhcccCe
Confidence 45667899999999 56899999996655 788887764 79999999999999999 777764
Q ss_pred cccccCccchhhhhccccCC-chhhHhHHh---hCCCCChHhHHHHHHHHhcCCCc
Q psy818 158 LVQSISPGLVKSQIFKSSLG-DKFDKSLYE---AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 158 ~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
|||+|+||.++|++...... ......... ....++|||||++++||+|.+++
T Consensus 183 rVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~ 238 (260)
T PRK06997 183 RANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLAS 238 (260)
T ss_pred EEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCcccc
Confidence 99999999999986542211 111111111 12356999999999999997543
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.2e-15 Score=121.68 Aligned_cols=115 Identities=16% Similarity=0.141 Sum_probs=86.0
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+.++++| .+++.++++|.+.+ ++++|.++. .|+++|+|+.+++++++ .++.+
T Consensus 107 ~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~~la----~el~~ 182 (272)
T PRK08159 107 RYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLA----VDLGP 182 (272)
T ss_pred CcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHHHHHHHHHHHH----HHhcc
Confidence 35566778999999999 66888999997666 788887654 79999999999999999 77766
Q ss_pred c--cccccCccchhhhhccccCCchhhHhHH----hhCCCCChHhHHHHHHHHhcCCCc
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGDKFDKSLY----EAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~----~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
. |||+|+||.++|++.............. .....++|||||++++||+|....
T Consensus 183 ~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~ 241 (272)
T PRK08159 183 KNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSR 241 (272)
T ss_pred cCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCcccc
Confidence 4 9999999999998754221111111111 112256999999999999996543
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-16 Score=127.27 Aligned_cols=113 Identities=23% Similarity=0.391 Sum_probs=88.2
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+..+++| .+++++.++|.+++ ++++|.++. .|+++|+|+.+++++++ .+++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA----~el~~ 167 (241)
T PF13561_consen 92 PLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLA----KELAP 167 (241)
T ss_dssp SGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHH----HHHGG
T ss_pred ChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHHHH----HHhcc
Confidence 45556668899999999 67899999888877 778888654 89999999999999999 89999
Q ss_pred -c--cccccCccchhhhhccccCCchhh-HhHHhhCC---CCChHhHHHHHHHHhcCC
Q psy818 157 -D--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAHP---CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 157 -~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~~---~~~pedvA~~v~fl~s~p 207 (214)
. |||+|+||+++|++.......+.. .......| ..+|||||++++||+|..
T Consensus 168 ~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~ 225 (241)
T PF13561_consen 168 KKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDA 225 (241)
T ss_dssp HGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGG
T ss_pred ccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCcc
Confidence 4 999999999999986543222222 22222333 358999999999999965
|
... |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.6e-15 Score=121.05 Aligned_cols=114 Identities=18% Similarity=0.153 Sum_probs=85.6
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc-
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP- 156 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~- 156 (214)
+.+.+.++|...+++| .++++++|+|.+.+ +|++|.++. .|+++|+|+.+|+++++ .++.+
T Consensus 107 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~~ 182 (257)
T PRK08594 107 FLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLA----NDLGKD 182 (257)
T ss_pred cccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHHHHHHHHHHHHHH----HHhhhc
Confidence 4566778899999988 46788999997766 789998764 89999999999999999 77766
Q ss_pred -ccccccCccchhhhhccccCC-chhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 157 -DLVQSISPGLVKSQIFKSSLG-DKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 157 -~~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.|||+|+||.++|++...... +......... ....+|||||++++||+|..+.
T Consensus 183 gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~ 240 (257)
T PRK08594 183 GIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSR 240 (257)
T ss_pred CCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccc
Confidence 399999999999986532111 1111111111 2356999999999999997543
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.2e-15 Score=120.61 Aligned_cols=114 Identities=20% Similarity=0.184 Sum_probs=86.6
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+.++++| .+++.++|.|.+.+ ++++|.++. .|+++|+|+.+++++++ .++.+
T Consensus 107 ~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~ 182 (258)
T PRK07533 107 RVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLA----AELGP 182 (258)
T ss_pred CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHHHHHHHHHHHHHHH----HHhhh
Confidence 35566778999999999 67899999997655 788887754 79999999999999999 77766
Q ss_pred c--cccccCccchhhhhccccCC-chhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 157 D--LVQSISPGLVKSQIFKSSLG-DKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
. +||+|+||.++|++...... +......... ..+.+|||||++++||+|.+.
T Consensus 183 ~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~ 240 (258)
T PRK07533 183 KGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAA 240 (258)
T ss_pred cCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhh
Confidence 4 99999999999998643211 1111111111 235699999999999998653
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.3e-15 Score=120.75 Aligned_cols=126 Identities=17% Similarity=0.231 Sum_probs=91.7
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.| +. .++.+.+.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+
T Consensus 85 D~lv~~ag-~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~ 163 (251)
T PRK12481 85 DILINNAG-IIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAV 163 (251)
T ss_pred CEEEECCC-cCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHH
Confidence 44566443 33 235566778999999999 5688999988653 3 788998754 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.+++++++ .++.+. |||+|+||.++|++.......... ...... ...++|||||++++||+|...+
T Consensus 164 ~~l~~~la----~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~ 235 (251)
T PRK12481 164 MGLTRALA----TELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASD 235 (251)
T ss_pred HHHHHHHH----HHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999 777654 999999999999976543211111 111122 2256999999999999986544
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.6e-15 Score=121.27 Aligned_cols=112 Identities=15% Similarity=0.098 Sum_probs=83.7
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc-
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD- 157 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~- 157 (214)
+.+.+.|+.++++| .+++++.|+|.+++ ++++|.++. .|+++|+|+.++++.++ .++.+.
T Consensus 107 ~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la----~e~~~~g 182 (261)
T PRK08690 107 SISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTA----ACLGKEG 182 (261)
T ss_pred hcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchhHHHHHHHHHHHHH----HHhhhcC
Confidence 45557899999888 56788999987653 688888754 79999999999999999 777764
Q ss_pred -cccccCccchhhhhccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 158 -LVQSISPGLVKSQIFKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 158 -~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
|||+|+||.++|++......... ....... ..+++|||||++++||+|.+..
T Consensus 183 IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~ 239 (261)
T PRK08690 183 IRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSS 239 (261)
T ss_pred eEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence 99999999999987643221111 1111111 2356999999999999996543
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.3e-15 Score=118.18 Aligned_cols=126 Identities=21% Similarity=0.224 Sum_probs=92.6
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.+++
T Consensus 90 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~ 169 (252)
T PRK12747 90 DILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMT 169 (252)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHHHHHHHHH
Confidence 5566754422 2235566677899999999 66888999998766 889998865 7999999999999
Q ss_pred hhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHh----hCCCCChHhHHHHHHHHhcCCC
Q psy818 144 FNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYE----AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 144 ~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~----~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++ .++.+. |||+|+||.++|++......+........ .....+|||||++++||+|..+
T Consensus 170 ~~la----~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 236 (252)
T PRK12747 170 FTLA----KQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDS 236 (252)
T ss_pred HHHH----HHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccc
Confidence 9999 666553 99999999999998654322222111111 1235699999999999998643
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.5e-16 Score=114.64 Aligned_cols=168 Identities=20% Similarity=0.288 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCCCce
Q psy818 9 TARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTNTRL 88 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ng~i 88 (214)
..|=+.++..|-+..|.- +.|...|+..|+++..+-- +-+|. ++.++ |+++
T Consensus 37 vaR~~a~L~sLV~e~p~~--I~Pi~~Dls~wea~~~~l~----------------~v~pi----------dgLVN-NAgv 87 (245)
T KOG1207|consen 37 VARNEANLLSLVKETPSL--IIPIVGDLSAWEALFKLLV----------------PVFPI----------DGLVN-NAGV 87 (245)
T ss_pred EecCHHHHHHHHhhCCcc--eeeeEecccHHHHHHHhhc----------------ccCch----------hhhhc-cchh
Confidence 345566677776655432 3555666666776654310 11111 33444 5544
Q ss_pred --eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHHHHHHhhccCc
Q psy818 89 --CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAARSLRFNLNDK 149 (214)
Q Consensus 89 --c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~ 149 (214)
..++.+.+.+.+++.+++| .+.+.+..-+..++ +|+||.++. .||++|+|+.++|++++
T Consensus 88 A~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lA-- 165 (245)
T KOG1207|consen 88 ATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLA-- 165 (245)
T ss_pred hhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHHH--
Confidence 3468888889999999999 45555444454443 899999866 89999999999999999
Q ss_pred chhhhCcc--cccccCccchhhhhccccCCchhhHh-HHhhCC---CCChHhHHHHHHHHhcCCCc
Q psy818 150 NFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKS-LYEAHP---CLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 150 ~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~-~~~~~~---~~~pedvA~~v~fl~s~p~~ 209 (214)
.|++|. |||++.|..+-|.|.+..+.++...+ .....| +.+.|+|.++++||+|..+.
T Consensus 166 --lELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ss 229 (245)
T KOG1207|consen 166 --LELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSS 229 (245)
T ss_pred --HhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcC
Confidence 999988 99999999999999887776655433 323333 45899999999999997643
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-14 Score=118.21 Aligned_cols=113 Identities=14% Similarity=0.109 Sum_probs=82.9
Q ss_pred CCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc-
Q psy818 93 SDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD- 157 (214)
Q Consensus 93 l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~- 157 (214)
.+.+.++|+..+++| .+++++.++|..++ ++++|.++. .|+++|+|+.+++++++ .|+.+.
T Consensus 106 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~~g 181 (262)
T PRK07984 106 NAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMA----NAMGPEG 181 (262)
T ss_pred hhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHHHHH----HHhcccC
Confidence 345667899999999 46778888776555 688887753 89999999999999999 787764
Q ss_pred -cccccCccchhhhhccccCCchh-hHhHH---hhCCCCChHhHHHHHHHHhcCCCc
Q psy818 158 -LVQSISPGLVKSQIFKSSLGDKF-DKSLY---EAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 158 -~vn~v~pg~~~t~~~~~~~~~~~-~~~~~---~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
|||+|+||.++|++......... ..... ....+++|||||++++||+|....
T Consensus 182 IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~ 238 (262)
T PRK07984 182 VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA 238 (262)
T ss_pred cEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccc
Confidence 99999999999986532111111 11111 112356999999999999987543
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.8e-15 Score=117.88 Aligned_cols=117 Identities=21% Similarity=0.195 Sum_probs=91.1
Q ss_pred eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchh
Q psy818 89 CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 89 c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
..++.+.+.++-..++++| .++++++|.|.+++ +||+|.+|. .|+|+|+++.+|+.+|+ .
T Consensus 97 ~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~----~ 172 (265)
T COG0300 97 FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALR----E 172 (265)
T ss_pred ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHH----H
Confidence 3457777777778889999 67899999999875 899999988 89999999999999999 6
Q ss_pred hhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccc
Q psy818 153 ELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQ 211 (214)
Q Consensus 153 e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~ 211 (214)
|+.+. +|.+++||.+.|++++. .... ..........++||+||+.+++.+.......
T Consensus 173 EL~~~gV~V~~v~PG~~~T~f~~~-~~~~-~~~~~~~~~~~~~~~va~~~~~~l~~~k~~i 231 (265)
T COG0300 173 ELKGTGVKVTAVCPGPTRTEFFDA-KGSD-VYLLSPGELVLSPEDVAEAALKALEKGKREI 231 (265)
T ss_pred HhcCCCeEEEEEecCccccccccc-cccc-cccccchhhccCHHHHHHHHHHHHhcCCceE
Confidence 66554 89999999999999862 1111 1111112336899999999999988755443
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.9e-14 Score=116.64 Aligned_cols=114 Identities=20% Similarity=0.092 Sum_probs=82.7
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc------HHHHHHHHHHHHHhhccCcchhhhCcc-
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS------DYERRQLAARSLRFNLNDKNFCELFPD- 157 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~------~Y~a~K~a~~~~~~~l~~~~~~e~~~~- 157 (214)
+.+.+.++|..++++| .+++.++|+|++.+ ++++|.+.. .|+++|+|+.+|+++++ .|+.+.
T Consensus 105 ~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~~g 180 (256)
T PRK07889 105 FLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYDWMGVAKAALESTNRYLA----RDLGPRG 180 (256)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCCccchhHHHHHHHHHHHHHHH----HHhhhcC
Confidence 4556667888999999 56889999998655 555544321 68999999999999999 777654
Q ss_pred -cccccCccchhhhhccccCCchhh-HhHHhhC----CCCChHhHHHHHHHHhcCCCc
Q psy818 158 -LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAH----PCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 158 -~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~----~~~~pedvA~~v~fl~s~p~~ 209 (214)
|||+|+||.++|++.......... ....... ...+|||||++++||+|.+..
T Consensus 181 Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~ 238 (256)
T PRK07889 181 IRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFP 238 (256)
T ss_pred eEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccc
Confidence 999999999999976432211111 1111111 246999999999999997643
|
|
| >KOG0895|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.3e-14 Score=128.16 Aligned_cols=112 Identities=20% Similarity=0.441 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC--
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN-- 85 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n-- 85 (214)
-.+..+.|++.|..+.+.+|.++..++.+....+.|.||.||||++|.|+|++.||++||..||.|++.+-...++||
T Consensus 852 ~~~~~~~~~~~~~~~~~~~~~vr~~e~r~d~~~~~~~g~~~tpy~~~~f~fd~~~~~~yp~~pp~~~~~s~~~r~npnly 931 (1101)
T KOG0895|consen 852 WAKKVQTEWKILPLSLPSGIFVRAYEDRMDLLRAVIVGAAGTPYQDGLFFFDFQFPQDYPSSPPLVHYHSGGVRLNPNLY 931 (1101)
T ss_pred HHHHHHHHHHhhhccCCCceEEEechHHHHHHHHHhhCCCCCccccceEEEEeecCCCCCCCCCceEeecCceeeCcccc
Confidence 345567788888888899999999999999999999999999999999999999999999999999999865567776
Q ss_pred --CceeeecCCC----CCCCCcCcccHHHHHHHHHHhhcc
Q psy818 86 --TRLCLSMSDF----HPDTWNPAWSVSTILTGLLSFMVE 119 (214)
Q Consensus 86 --g~ic~~~l~~----~~e~w~~~~~vn~~l~a~~~~m~~ 119 (214)
|.+|++++.+ ..|.|++.-.+-+++..++.+...
T Consensus 932 ~~g~vc~s~l~tw~g~~~e~w~~~s~~lq~l~s~q~l~l~ 971 (1101)
T KOG0895|consen 932 EDGKVCLSLLNTWHGRGNEVWNPSSSILQVLVSIQGLVLN 971 (1101)
T ss_pred cccceehhhhccccCCCccccCcchhHHHHHHHhhhhhcc
Confidence 8999997754 347899976666666666655443
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-14 Score=117.65 Aligned_cols=128 Identities=23% Similarity=0.297 Sum_probs=95.4
Q ss_pred CceecCCCceeee--cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLCLS--MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic~~--~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
|++++ |+|+-.. ..+.+.+++++++++| .++++++|.|++++ ++++|++|. .|+|||+|+.
T Consensus 93 DvLVN-NAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~ 171 (282)
T KOG1205|consen 93 DVLVN-NAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALE 171 (282)
T ss_pred CEEEe-cCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHHH
Confidence 43444 5544332 3345567899999999 78999999999874 899999988 7999999999
Q ss_pred HHHhhccCcchhhhCccccc---ccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHH--HHHHHhcCCCccccC
Q psy818 141 SLRFNLNDKNFCELFPDLVQ---SISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIAN--TVEFILSSPPHVQVS 213 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~~vn---~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~--~v~fl~s~p~~~~i~ 213 (214)
+|..+|| .|+.+..++ .|+||+|+|++........... ....+..+++|++. .+++..+.|.+..+.
T Consensus 172 ~f~etLR----~El~~~~~~i~i~V~PG~V~Te~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (282)
T KOG1205|consen 172 GFFETLR----QELIPLGTIIIILVSPGPIETEFTGKELLGEEGK--SQQGPFLRTEDVADPEAVAYAISTPPCRQVE 243 (282)
T ss_pred HHHHHHH----HHhhccCceEEEEEecCceeecccchhhcccccc--ccccchhhhhhhhhHHHHHHHHhcCcccchh
Confidence 9999999 888775322 6999999999765432211111 22334578888876 999999999887764
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.7e-14 Score=114.91 Aligned_cols=127 Identities=18% Similarity=0.197 Sum_probs=91.7
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..+..+.+.++|+.++++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 167 (260)
T PRK07063 88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLG 167 (260)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHHH
Confidence 4466654422 1234456668899999999 66899999997653 788888754 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC---c-h-hhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG---D-K-FDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~---~-~-~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .++.+. |||+|+||+++|++...... + . ........ ....+|||||++++||+|...+
T Consensus 168 ~~~~la----~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~ 241 (260)
T PRK07063 168 LTRALG----IEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAP 241 (260)
T ss_pred HHHHHH----HHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 999999 777664 99999999999997643211 1 1 11111111 2356999999999999997654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.1e-14 Score=115.97 Aligned_cols=125 Identities=15% Similarity=0.168 Sum_probs=89.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc---------HHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS---------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~---------~Y~a~K~a 138 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++.+.|.++ + ++++|.++. .|+++|+|
T Consensus 88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaa 167 (253)
T PRK05867 88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAA 167 (253)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHH
Confidence 44666554322 235566678899999998 6688899988664 2 677776531 69999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHh---hCCCCChHhHHHHHHHHhcCCCc
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYE---AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+.+++++++ .++.+. +||+|+||.++|++..... ........ ...+.+|||||++++||+|....
T Consensus 168 l~~~~~~la----~e~~~~gI~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~ 237 (253)
T PRK05867 168 VIHLTKAMA----VELAPHKIRVNSVSPGYILTELVEPYT--EYQPLWEPKIPLGRLGRPEELAGLYLYLASEASS 237 (253)
T ss_pred HHHHHHHHH----HHHhHhCeEEEEeecCCCCCcccccch--HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccC
Confidence 999999999 677653 9999999999999865321 11111111 12356999999999999997543
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.9e-14 Score=115.68 Aligned_cols=115 Identities=21% Similarity=0.249 Sum_probs=83.9
Q ss_pred ecCCCCCCCCcCcccHH------HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHHHHHhhccCcchh
Q psy818 91 SMSDFHPDTWNPAWSVS------TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn------~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
++++.+.+.|+.++++| .+.+.+.+++.+.+ ++++|.++. .|+++|+|+.+++++++ .
T Consensus 105 ~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA----~ 180 (270)
T KOG0725|consen 105 SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLA----K 180 (270)
T ss_pred ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchhHHHHHHHHHHHHH----H
Confidence 57889999999999999 34555666666533 556666543 79999999999999999 8
Q ss_pred hhCcc--cccccCccchhhhhccccCCch---hhHhH------HhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 153 ELFPD--LVQSISPGLVKSQIFKSSLGDK---FDKSL------YEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 153 e~~~~--~vn~v~pg~~~t~~~~~~~~~~---~~~~~------~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
|+.+. |||+|+||.+.|++........ ...+. ......++|+|||.+++||++....
T Consensus 181 El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~as 248 (270)
T KOG0725|consen 181 ELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDAS 248 (270)
T ss_pred HHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCcccc
Confidence 88876 9999999999999722111111 11111 1122356999999999999998644
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.5e-14 Score=115.86 Aligned_cols=115 Identities=13% Similarity=0.185 Sum_probs=86.9
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|..++++| .+++++.+.|.+.+ +++||.++. .|+++|+|+.++++.++ .++.+
T Consensus 144 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la----~el~~ 219 (294)
T PRK07985 144 DIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLA----KQVAE 219 (294)
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHH----HHHhH
Confidence 35667778999999999 57889999987666 788998764 79999999999999999 77765
Q ss_pred c--cccccCccchhhhhccccC-CchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 157 D--LVQSISPGLVKSQIFKSSL-GDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~-~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
. +||+|+||.++|++..... ........... ...++|||||++++||+|..+.
T Consensus 220 ~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~ 278 (294)
T PRK07985 220 KGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESS 278 (294)
T ss_pred hCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcC
Confidence 3 9999999999999753211 11111111111 2256999999999999997654
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.9e-14 Score=111.58 Aligned_cols=100 Identities=9% Similarity=0.084 Sum_probs=81.0
Q ss_pred CCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc---HHHHHHHHHHHHHhhccCcchhhhCcc--cccccC
Q psy818 96 HPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS---DYERRQLAARSLRFNLNDKNFCELFPD--LVQSIS 163 (214)
Q Consensus 96 ~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~---~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~ 163 (214)
+.++|+.++++| .+++++++.|.+.+ ++++|.+.. .|+++|+|+.+++++++ .++.+. |||+|+
T Consensus 94 ~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~Y~asKaal~~~~~~la----~e~~~~gI~v~~v~ 169 (223)
T PRK05884 94 TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENPPAGSAEAAIKAALSNWTAGQA----AVFGTRGITINAVA 169 (223)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCCccccHHHHHHHHHHHHHHH----HHhhhcCeEEEEEe
Confidence 357899999999 67899999998766 788887743 89999999999999999 677653 999999
Q ss_pred ccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 164 PGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 164 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
||.++|++.+.. ...+..+|||||++++||+|.++.
T Consensus 170 PG~v~t~~~~~~----------~~~p~~~~~~ia~~~~~l~s~~~~ 205 (223)
T PRK05884 170 CGRSVQPGYDGL----------SRTPPPVAAEIARLALFLTTPAAR 205 (223)
T ss_pred cCccCchhhhhc----------cCCCCCCHHHHHHHHHHHcCchhh
Confidence 999999864321 112335999999999999997644
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.5e-14 Score=113.20 Aligned_cols=127 Identities=15% Similarity=0.178 Sum_probs=89.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~ 167 (254)
T PRK06114 88 TLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGV 167 (254)
T ss_pred CEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHH
Confidence 44666544321 235566678899999999 56788899887653 778887642 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.+++++++ .++.+. +||+|+||.++|++.......+........ ....+|||||++++||+|...+
T Consensus 168 ~~l~~~la----~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~ 238 (254)
T PRK06114 168 IHLSKSLA----MEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAAS 238 (254)
T ss_pred HHHHHHHH----HHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 99999999 666653 999999999999976431111111111112 2356999999999999987543
|
|
| >KOG0895|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.3e-13 Score=121.29 Aligned_cols=115 Identities=22% Similarity=0.482 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcC-CceecC
Q psy818 6 CGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITP-NGRFKT 84 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~-~~~~h~ 84 (214)
....+|+++|++-+.++.++|+.+++.+..++..++.|.||.||||++|+|.|+|.||..||..||++++++. ...++|
T Consensus 281 ~~~skrv~ke~~llskdlpEgifvrp~e~RMd~I~alIig~~gtPy~~glf~Fdiq~P~~yPa~pp~v~~lt~~~~R~nP 360 (1101)
T KOG0895|consen 281 KNWSKKVAKELKLLSKDLPEGIFVRPDEGRMDLIKALIIGPDGTPYADGLFLFDIQFPDTYPAVPPHVKYLTGGGVRLNP 360 (1101)
T ss_pred hhhHHHHHHHhhhhcccCCCCccccccccccceeeeEEecCCCCCCcCCceeeEeecCCCCCCCCceeEEeeccceeecC
Confidence 3467899999999999999999999999999999999999999999999999999999999999999999996 445555
Q ss_pred ----CCceeeecCCC----CCCCCcCc-ccHHHHHHHHHHhhccC
Q psy818 85 ----NTRLCLSMSDF----HPDTWNPA-WSVSTILTGLLSFMVER 120 (214)
Q Consensus 85 ----ng~ic~~~l~~----~~e~w~~~-~~vn~~l~a~~~~m~~~ 120 (214)
||.||++++.. ..+.|.+. -.+.+++..++.++...
T Consensus 361 NlYn~GKVcLslLgTwtg~~~e~wtp~~~sl~qvL~sIQ~Li~~e 405 (1101)
T KOG0895|consen 361 NLYNDGKVCLSLLGTWTGSRREKWTPNGSSLLQVLESIQGLILNE 405 (1101)
T ss_pred CcccCceEEeeeeeecccccccCCCccccchhhhhhhhhhhhccc
Confidence 49999986532 23578777 44556776666666554
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.2e-14 Score=115.59 Aligned_cols=113 Identities=14% Similarity=0.213 Sum_probs=82.6
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccC--C--CCCCCCcC----------cHHHHHHHHHHHHHhhccCcchh
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVER--S--PTLGSIEM----------SDYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--~--v~i~S~a~----------~~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
+.+.+.++|..++++| .+++++++.|.++ + ++++|..+ ..|+++|+|+.+++++++ .
T Consensus 116 ~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La----~ 191 (305)
T PRK08303 116 VWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLA----H 191 (305)
T ss_pred hhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHH----H
Confidence 4455667899998888 5688999999765 3 68888542 279999999999999999 7
Q ss_pred hhCcc--cccccCccchhhhhccccCC--chhhHhHHhh----CCCCChHhHHHHHHHHhcCCC
Q psy818 153 ELFPD--LVQSISPGLVKSQIFKSSLG--DKFDKSLYEA----HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 153 e~~~~--~vn~v~pg~~~t~~~~~~~~--~~~~~~~~~~----~~~~~pedvA~~v~fl~s~p~ 208 (214)
++.+. |||+|+||.++|++...... .......... ....+|||||++++||+|.+.
T Consensus 192 el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~ 255 (305)
T PRK08303 192 ELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYVGRAVAALAADPD 255 (305)
T ss_pred HhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHHHHHHHHHHHHcCcc
Confidence 88774 99999999999997532111 1111111111 123489999999999999874
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.3e-14 Score=107.93 Aligned_cols=115 Identities=13% Similarity=0.141 Sum_probs=86.7
Q ss_pred CCCCcCcccHH-----HHHHHHHHhhccCC-------CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc
Q psy818 97 PDTWNPAWSVS-----TILTGLLSFMVERS-------PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD 157 (214)
Q Consensus 97 ~e~w~~~~~vn-----~~l~a~~~~m~~~~-------v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~ 157 (214)
+.+|++++++| .-+..++|+|.++. +|+||++|. .|+|+|+|+.+|||++++...-.-.+.
T Consensus 96 dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV 175 (261)
T KOG4169|consen 96 DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGV 175 (261)
T ss_pred chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehhhhhhhhHhhcCE
Confidence 36799999999 44788999996643 899999998 899999999999999986532222355
Q ss_pred cccccCccchhhhhccccC-------CchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccc
Q psy818 158 LVQSISPGLVKSQIFKSSL-------GDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQ 211 (214)
Q Consensus 158 ~vn~v~pg~~~t~~~~~~~-------~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~ 211 (214)
+++++|||+++|++..... .++...+..+..+...|+++|.-++-+...+.+-.
T Consensus 176 ~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~NGa 236 (261)
T KOG4169|consen 176 RFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPKNGA 236 (261)
T ss_pred EEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhccCCc
Confidence 9999999999998765431 12223334444556789999999988887765543
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.2e-14 Score=113.58 Aligned_cols=126 Identities=17% Similarity=0.219 Sum_probs=90.6
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... ..+.+.+.+.|+.++++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~ 163 (272)
T PRK08589 84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVIN 163 (272)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHHHHHH
Confidence 44666554332 234556667899999999 56889999997654 788888754 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCch--hh-HhHH-------hhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDK--FD-KSLY-------EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~--~~-~~~~-------~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.++|++.+...... .. .... ....+.+|||||++++||+|.+.
T Consensus 164 l~~~la----~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 238 (272)
T PRK08589 164 FTKSIA----IEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS 238 (272)
T ss_pred HHHHHH----HHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchh
Confidence 999999 677653 9999999999999865422111 00 1110 11124589999999999998754
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-13 Score=111.38 Aligned_cols=127 Identities=13% Similarity=0.170 Sum_probs=91.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|..- ..+.+.+.++|+.++++| .+++++.+.|.++ + ++++|.++. .|+++|+|+.
T Consensus 87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~ 166 (253)
T PRK08993 87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVM 166 (253)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHH
Confidence 45666544221 235566778899999999 5688889988654 3 788887654 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHh---hCCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYE---AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~---~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++.++ .++.+. +||+|+||.++|++.......... ..... ....++|||||++++||+|.+..
T Consensus 167 ~~~~~la----~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~ 237 (253)
T PRK08993 167 GVTRLMA----NEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASD 237 (253)
T ss_pred HHHHHHH----HHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999 666653 999999999999876432211111 11111 22356999999999999997644
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.7e-14 Score=115.74 Aligned_cols=124 Identities=13% Similarity=0.182 Sum_probs=86.6
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYERR 135 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~a~ 135 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++
T Consensus 94 d~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as 173 (286)
T PRK07791 94 DVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAA 173 (286)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCCchhhHHH
Confidence 3455644322 1235667778999999999 5678899988642 3 688888754 89999
Q ss_pred HHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh-CCCCChHhHHHHHHHHhcCCC
Q psy818 136 QLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA-HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 136 K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~-~~~~~pedvA~~v~fl~s~p~ 208 (214)
|+|+.+++++++ .|+.+. |||+|+|| +.|++..... .......... ....+|||||++++||+|...
T Consensus 174 Kaal~~l~~~la----~el~~~gIrVn~v~Pg-~~T~~~~~~~-~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~ 243 (286)
T PRK07791 174 KAGIAALTLVAA----AELGRYGVTVNAIAPA-ARTRMTETVF-AEMMAKPEEGEFDAMAPENVSPLVVWLGSAES 243 (286)
T ss_pred HHHHHHHHHHHH----HHHHHhCeEEEEECCC-CCCCcchhhH-HHHHhcCcccccCCCCHHHHHHHHHHHhCchh
Confidence 999999999999 777654 99999999 7887653211 1000000000 124699999999999998654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-13 Score=112.07 Aligned_cols=114 Identities=17% Similarity=0.102 Sum_probs=84.7
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
+.+.+.++|...+++| .+++.+++.|.+.+ ++++|.++. .|+++|+|+.+++++++ .++.
T Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la----~el~ 184 (260)
T PRK08416 109 FMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAA----TELG 184 (260)
T ss_pred hhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccchhhHHHHHHHHHHHH----HHhh
Confidence 4455667888888888 45788899887653 788888754 79999999999999999 7776
Q ss_pred cc--cccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 156 PD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 156 ~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+. +||+|+||.++|++.......... ...... ..+.+|||||++++||++.+++
T Consensus 185 ~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~ 244 (260)
T PRK08416 185 EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKAS 244 (260)
T ss_pred hhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhh
Confidence 53 999999999999986533221111 111111 2256999999999999987644
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.3e-13 Score=111.24 Aligned_cols=127 Identities=14% Similarity=0.130 Sum_probs=91.0
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~ 139 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 164 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGL 164 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHH
Confidence 4566654422 1245566778899999999 46788899997653 778887542 799999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHh----hCCCCChHhHHHHHHHHhcCCCc
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYE----AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~----~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.+++++++ .++.+ .+||+|+||.++|++............... .....+|||||++++||+|.+..
T Consensus 165 ~~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 236 (254)
T PRK07478 165 IGLTQVLA----AEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAAS 236 (254)
T ss_pred HHHHHHHH----HHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 99999999 67665 499999999999997653221111111111 12356999999999999987644
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.5e-13 Score=111.33 Aligned_cols=127 Identities=12% Similarity=0.115 Sum_probs=87.0
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhcc-C--C--CCCCCCcCc-------HHHHHHHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVE-R--S--PTLGSIEMS-------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~-~--~--v~i~S~a~~-------~Y~a~K~a 138 (214)
++++|+.|... ..+.+.+.++|...+++| .+++.+++.|.+ + + ++++|.++. .|+++|+|
T Consensus 78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa 157 (259)
T PRK08340 78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAG 157 (259)
T ss_pred CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHH
Confidence 44566544321 135556667888887777 456777887753 2 3 788888764 79999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccC---------C-chh-hHhHHhh---CCCCChHhHHHHHHH
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---------G-DKF-DKSLYEA---HPCLQAEDIANTVEF 202 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---------~-~~~-~~~~~~~---~~~~~pedvA~~v~f 202 (214)
+.+++++++ .++.+. +||+|+||.++|++..... . ++. ....... ..+++|||||++++|
T Consensus 158 ~~~~~~~la----~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~f 233 (259)
T PRK08340 158 LVQLAKGVS----RTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAF 233 (259)
T ss_pred HHHHHHHHH----HHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHH
Confidence 999999999 777654 9999999999998753211 0 110 0111111 235699999999999
Q ss_pred HhcCCCc
Q psy818 203 ILSSPPH 209 (214)
Q Consensus 203 l~s~p~~ 209 (214)
|+|.+.+
T Consensus 234 L~s~~~~ 240 (259)
T PRK08340 234 LLSENAE 240 (259)
T ss_pred HcCcccc
Confidence 9997643
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-13 Score=111.30 Aligned_cols=127 Identities=13% Similarity=0.200 Sum_probs=90.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.+
T Consensus 74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~ 153 (258)
T PRK06398 74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLG 153 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHH
Confidence 55666544322 245566778899999999 56889999996543 788888754 89999999999
Q ss_pred HHhhccCcchhhhCc-ccccccCccchhhhhccccCC-----chh-hH----hHH---hhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP-DLVQSISPGLVKSQIFKSSLG-----DKF-DK----SLY---EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~-~~vn~v~pg~~~t~~~~~~~~-----~~~-~~----~~~---~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+||+|+||.++|++...... +.. .. ... ......+|||||++++||+|..
T Consensus 154 ~~~~la----~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~ 229 (258)
T PRK06398 154 LTRSIA----VDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL 229 (258)
T ss_pred HHHHHH----HHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence 999999 67666 499999999999997643210 111 00 001 1122459999999999999975
Q ss_pred Cc
Q psy818 208 PH 209 (214)
Q Consensus 208 ~~ 209 (214)
.+
T Consensus 230 ~~ 231 (258)
T PRK06398 230 AS 231 (258)
T ss_pred cC
Confidence 43
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.2e-13 Score=110.52 Aligned_cols=127 Identities=13% Similarity=0.149 Sum_probs=90.4
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++|+.|.. ...+.+.+.++|...+++| .+++.+++.|... + ++++|..+. .|+++|+|+.
T Consensus 99 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~ 178 (262)
T PRK07831 99 DVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVM 178 (262)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHHHH
Confidence 4456654421 1235566668899999888 5678889988754 3 677776653 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++++++ .++.+. +||+|+||.+.|++.......+........ ....+|||||++++||+|....
T Consensus 179 ~~~~~la----~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~ 248 (262)
T PRK07831 179 ALTRCSA----LEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSS 248 (262)
T ss_pred HHHHHHH----HHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 9999999 777664 999999999999976533222222222121 2356999999999999997643
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-13 Score=111.39 Aligned_cols=125 Identities=17% Similarity=0.116 Sum_probs=86.9
Q ss_pred CceecCCCcee--eecCCCCCCC----CcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDT----WNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQL 137 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~----w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~ 137 (214)
++++|+.|... .++.+.+.++ |+.++++| .+++++++.|.+++ ++++|.++. .|+++|+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~ 161 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKH 161 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHHH
Confidence 44666544221 2343444444 88888888 56888999887643 788887754 7999999
Q ss_pred HHHHHHhhccCcchhhhCcc-cccccCccchhhhhccccC-C---------chhhHhHHh---hCCCCChHhHHHHHHHH
Q psy818 138 AARSLRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSL-G---------DKFDKSLYE---AHPCLQAEDIANTVEFI 203 (214)
Q Consensus 138 a~~~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~-~---------~~~~~~~~~---~~~~~~pedvA~~v~fl 203 (214)
|+.++++.++ .++.+. |||+|+||.++|++..... . ......... .....+|||||++++||
T Consensus 162 a~~~~~~~la----~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl 237 (263)
T PRK06200 162 AVVGLVRQLA----YELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLL 237 (263)
T ss_pred HHHHHHHHHH----HHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhhe
Confidence 9999999999 777665 9999999999998753211 0 001111111 12356999999999999
Q ss_pred hcCC
Q psy818 204 LSSP 207 (214)
Q Consensus 204 ~s~p 207 (214)
+|.+
T Consensus 238 ~s~~ 241 (263)
T PRK06200 238 ASRR 241 (263)
T ss_pred eccc
Confidence 9866
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-13 Score=112.00 Aligned_cols=106 Identities=19% Similarity=0.176 Sum_probs=79.0
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc-cccc
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD-LVQS 161 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~-~vn~ 161 (214)
++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+++++++ .++.+. |||+
T Consensus 106 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la----~e~~~~irvn~ 181 (262)
T TIGR03325 106 EAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELA----FELAPYVRVNG 181 (262)
T ss_pred HHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHH----HhhccCeEEEE
Confidence 3699999988 67899999996543 677776643 79999999999999999 777775 9999
Q ss_pred cCccchhhhhcccc-C--Cch-----hhHhHH----hhCCCCChHhHHHHHHHHhcCC
Q psy818 162 ISPGLVKSQIFKSS-L--GDK-----FDKSLY----EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 162 v~pg~~~t~~~~~~-~--~~~-----~~~~~~----~~~~~~~pedvA~~v~fl~s~p 207 (214)
|+||.++|++.... . ... ...... ......+|||||++++||+|.+
T Consensus 182 i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~ 239 (262)
T TIGR03325 182 VAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRG 239 (262)
T ss_pred EecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCC
Confidence 99999999876421 0 010 011111 1223569999999999999964
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.9e-13 Score=112.17 Aligned_cols=127 Identities=13% Similarity=0.129 Sum_probs=92.1
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|...+ ++++|.++. .|+++|+|+.++
T Consensus 136 D~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~ 215 (300)
T PRK06128 136 DILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAIVAF 215 (300)
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHHHHH
Confidence 4566654422 2346667778999999999 57889999987655 788888765 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccC-CchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL-GDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~-~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++.++ .++.+. +||+|+||.++|++..... ..+........ ..+++|+|||.+++||++..+.
T Consensus 216 ~~~la----~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~ 284 (300)
T PRK06128 216 TKALA----KQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESS 284 (300)
T ss_pred HHHHH----HHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999 666543 9999999999999754311 11111111111 2356999999999999997543
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.3e-13 Score=110.58 Aligned_cols=127 Identities=19% Similarity=0.208 Sum_probs=88.4
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
++++|+.|.......+.+.++|+..+++| .+++++.+.|.++ + ++++|.++. .|+++|+|+.+++
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~ 161 (261)
T PRK08265 82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLT 161 (261)
T ss_pred CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHH
Confidence 44566443221122344567899999988 5688889988633 3 788888754 7999999999999
Q ss_pred hhccCcchhhhCcc--cccccCccchhhhhccccCCchh--hHhHH----hhCCCCChHhHHHHHHHHhcCCCc
Q psy818 144 FNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF--DKSLY----EAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 144 ~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~--~~~~~----~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+.++ .++.+. +||+|+||.++|++......... ..... ....+.+|||||++++||+|.+..
T Consensus 162 ~~la----~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~ 231 (261)
T PRK08265 162 RSMA----MDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAAS 231 (261)
T ss_pred HHHH----HHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCcccc
Confidence 9999 677653 99999999999997653221111 11111 112356999999999999987543
|
|
| >KOG0896|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.8e-12 Score=91.68 Aligned_cols=112 Identities=21% Similarity=0.258 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHhcCCCC-CeEEeecC-CC--cccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCC---
Q psy818 7 GATARLKQDYMKLKKDPIP-YVIAEPNP-AN--ILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPN--- 79 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~-~~~~~~~~-~~--~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~--- 79 (214)
+..-||.+|+.+-++--.+ .++...++ +| +..|..+|.||+.|+||+.+|.|.|.+.++||-.||.|+|.++.
T Consensus 5 Prnfrlleele~g~kg~g~~~~s~gl~d~~dmtl~rWtg~IiGPprT~yEnRiysLKI~Cgp~YPe~PP~vrf~tkinm~ 84 (138)
T KOG0896|consen 5 PRNFRLLEELEEGEKGIGDGTVSWGLEDDDDMTLTRWTGTIIGPPRTMYENRIYSLKIECGPKYPELPPTVRFGTKINMN 84 (138)
T ss_pred ccchhhhhhhccccccccCceeeccccCCCcceEeeeccceeCCCCcccccceeeEEEecCCCCCCCCceeEEEEEeeec
Confidence 3445899999888775444 44555444 33 57999999999999999999999999999999999999999972
Q ss_pred ceecCCCceeeecCCCCCCCCcCcccHHHHHHHHHHhhcc
Q psy818 80 GRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119 (214)
Q Consensus 80 ~~~h~ng~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~ 119 (214)
++-+.||.+-..... -.+.|...+.+..++..+.+.|..
T Consensus 85 gvn~~~g~Vd~~~i~-~L~~W~~~y~~~~vl~~lr~~m~~ 123 (138)
T KOG0896|consen 85 GVNSSNGVVDPRDIT-VLARWQRSYSIKMVLGQLRKEMMS 123 (138)
T ss_pred ccccCCCccCccccc-hhhcccccchhhHHHHhhhHHHHH
Confidence 122223333221111 137899999999888888877654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.3e-13 Score=120.80 Aligned_cols=126 Identities=17% Similarity=0.232 Sum_probs=91.1
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|...+ ++++|.++. .|+++|+|+.++
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l 424 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTML 424 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHH
Confidence 3455544422 1235566778899999999 66899999995545 889998765 899999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCc-h-hhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD-K-FDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~-~-~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++.++ .++.+. +||+|+||.++|++....... . ........ ....+|||||++++||++.+.
T Consensus 425 ~~~la----~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~ 493 (520)
T PRK06484 425 SRSLA----CEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAA 493 (520)
T ss_pred HHHHH----HHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999 677654 999999999999986532211 1 11111111 234699999999999998654
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-13 Score=110.22 Aligned_cols=126 Identities=17% Similarity=0.166 Sum_probs=89.8
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|...+++| .+++.+++.|++.+ ++++|.++. .|+++|+|+.+
T Consensus 89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~~ 168 (265)
T PRK07062 89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLN 168 (265)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHHH
Confidence 4466654432 1235566677899999998 56889999998753 788888764 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC-----c---hhh-HhHH-----hhCCCCChHhHHHHHHHHhc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG-----D---KFD-KSLY-----EAHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~-----~---~~~-~~~~-----~~~~~~~pedvA~~v~fl~s 205 (214)
++++++ .++.+. +||+|+||.++|+++..... . ... .... ....+.+|||||++++||+|
T Consensus 169 ~~~~la----~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s 244 (265)
T PRK07062 169 LVKSLA----TELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLAS 244 (265)
T ss_pred HHHHHH----HHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhC
Confidence 999999 666553 99999999999987543110 0 000 1110 11225699999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
...
T Consensus 245 ~~~ 247 (265)
T PRK07062 245 PLS 247 (265)
T ss_pred chh
Confidence 643
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.7e-13 Score=108.08 Aligned_cols=127 Identities=17% Similarity=0.261 Sum_probs=90.5
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+-|... .++.+.+.++|+..+++| .+++++.+.|.+++ ++++|..+. .|+++|+|+.+
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 167 (254)
T PRK08085 88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKM 167 (254)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHH
Confidence 44566544321 235566678899999999 56788888886543 778887643 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhH-Hhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSL-YEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~-~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .++.+ .+||+|+||.++|++............. ... ...++|||||++++||+|...+
T Consensus 168 ~~~~la----~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~ 237 (254)
T PRK08085 168 LTRGMC----VELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASD 237 (254)
T ss_pred HHHHHH----HHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 999999 67665 3999999999999976543222111111 111 2256999999999999997543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.4e-13 Score=108.86 Aligned_cols=108 Identities=14% Similarity=0.166 Sum_probs=79.4
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC-------------------------------------cHHH
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM-------------------------------------SDYE 133 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~-------------------------------------~~Y~ 133 (214)
++|+.++++| .+++.+.+.|..++ ++++|.++ ..|+
T Consensus 91 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 170 (275)
T PRK06940 91 ASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQ 170 (275)
T ss_pred hhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhH
Confidence 5699999999 66889999997665 66666543 2699
Q ss_pred HHHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCc---hhhHhHHhh---CCCCChHhHHHHHHHHhc
Q psy818 134 RRQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD---KFDKSLYEA---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~---~~~~~~~~~---~~~~~pedvA~~v~fl~s 205 (214)
++|+|+.++++.++ .++.+ .|||+|+||.++|++....... +........ ...++|||||++++||+|
T Consensus 171 asKaa~~~~~~~la----~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s 246 (275)
T PRK06940 171 IAKRANALRVMAEA----VKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMG 246 (275)
T ss_pred HHHHHHHHHHHHHH----HHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcC
Confidence 99999999999999 67765 3999999999999976432211 111111111 235699999999999998
Q ss_pred CCCc
Q psy818 206 SPPH 209 (214)
Q Consensus 206 ~p~~ 209 (214)
....
T Consensus 247 ~~~~ 250 (275)
T PRK06940 247 PRGS 250 (275)
T ss_pred cccC
Confidence 6543
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.7e-13 Score=107.16 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=89.5
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--C--CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--S--PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--~--v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++.+.|.++ + ++++|..+. .|+++|+|+.+
T Consensus 83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~ 162 (259)
T PRK06125 83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMA 162 (259)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHH
Confidence 55667554322 245667778999999999 5688899999765 3 677877654 78999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccC--------Cchh-hHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL--------GDKF-DKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~--------~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
++++++ .++.+. +||+|+||.++|++..... .+.. ....... ....+|+|||++++||++..
T Consensus 163 ~~~~la----~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 238 (259)
T PRK06125 163 FTRALG----GKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPR 238 (259)
T ss_pred HHHHHH----HHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCch
Confidence 999999 666553 9999999999998643211 1111 1111111 22468999999999999865
Q ss_pred C
Q psy818 208 P 208 (214)
Q Consensus 208 ~ 208 (214)
.
T Consensus 239 ~ 239 (259)
T PRK06125 239 S 239 (259)
T ss_pred h
Confidence 3
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.5e-13 Score=107.34 Aligned_cols=126 Identities=17% Similarity=0.176 Sum_probs=89.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .+++.+++.|.+++ ++++|.++. .|+++|+|+.
T Consensus 81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~ 160 (255)
T PRK06463 81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGII 160 (255)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHH
Confidence 45666544322 235556677899999999 45789999997543 788887542 6999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCch---hh-HhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDK---FD-KSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~---~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+ .+||+|+||.++|++.......+ .. ...... ....+|||+|++++||++.+.
T Consensus 161 ~~~~~la----~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 233 (255)
T PRK06463 161 ILTRRLA----FELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDA 233 (255)
T ss_pred HHHHHHH----HHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhh
Confidence 9999999 67665 39999999999999864321111 11 111111 224699999999999998764
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.8e-13 Score=108.77 Aligned_cols=118 Identities=16% Similarity=0.184 Sum_probs=90.2
Q ss_pred cCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHh
Q psy818 83 KTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRF 144 (214)
Q Consensus 83 h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~ 144 (214)
-+|+++ |.++++.++++.+.++++| .++++++|.|.+.+ |+|+|++|. +||++|+|+.||.+
T Consensus 119 VNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhe 198 (300)
T KOG1201|consen 119 VNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHE 198 (300)
T ss_pred EeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHHHH
Confidence 346555 4568889999999999999 67999999998854 899999988 89999999999999
Q ss_pred hccCcchhhhCcc-cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 145 NLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 145 ~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
+|..|.-..-..+ +..+|+|+.++|.|.+.. .......|.++|+.+|+.|+-....
T Consensus 199 sL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~------~~~~~l~P~L~p~~va~~Iv~ai~~ 255 (300)
T KOG1201|consen 199 SLSMELRALGKDGIKTTLVCPYFINTGMFDGA------TPFPTLAPLLEPEYVAKRIVEAILT 255 (300)
T ss_pred HHHHHHHhcCCCCeeEEEEeeeeccccccCCC------CCCccccCCCCHHHHHHHHHHHHHc
Confidence 9985533322332 677799999999988641 1111234568999999988765543
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=6e-13 Score=106.29 Aligned_cols=120 Identities=13% Similarity=0.184 Sum_probs=83.5
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|.... ...+.+.++|+.++++| .+++.+++.|.+. + ++++|.++. .|+++|+|+
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal 155 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL 155 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence 446665443211 23455567899999998 5678889988753 2 677777643 799999999
Q ss_pred HHHHhhccCcchhhhCcc-cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhc
Q psy818 140 RSLRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s 205 (214)
.++++.++ .++.+. |||+|+||.+.|+... .+......... ....+|||||+++.||++
T Consensus 156 ~~l~~~~a----~e~~~~irvn~v~Pg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 218 (236)
T PRK06483 156 DNMTLSFA----AKLAPEVKVNSIAPALILFNEGD---DAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT 218 (236)
T ss_pred HHHHHHHH----HHHCCCcEEEEEccCceecCCCC---CHHHHHHHhccCccccCCCHHHHHHHHHHHhc
Confidence 99999999 777665 9999999998765321 11111111111 124599999999999997
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.9e-13 Score=106.47 Aligned_cols=127 Identities=15% Similarity=0.244 Sum_probs=90.5
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|..- .++.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 172 (258)
T PRK06935 93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAG 172 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHH
Confidence 44666544321 234555667899999988 56889999997754 778887653 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHH---hhCCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLY---EAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~---~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .++.+. +||+|+||.++|++.......... .... .....++|||||++++||+|...+
T Consensus 173 ~~~~la----~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~ 242 (258)
T PRK06935 173 LTKAFA----NELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASD 242 (258)
T ss_pred HHHHHH----HHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhc
Confidence 999999 777653 999999999999875432211111 1111 122356999999999999997543
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-12 Score=105.02 Aligned_cols=125 Identities=19% Similarity=0.217 Sum_probs=88.2
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.......+.+.++|+..+++| .+++++.+.|.+.+ +++||.++. .|+++|+|+.++
T Consensus 90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 169 (255)
T PRK06113 90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL 169 (255)
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence 45667555322222245557788888888 56888888886532 778887764 899999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++++ .++.+. +||+|+||.++|++................ ...++|||+|++++||++..
T Consensus 170 ~~~la----~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 235 (255)
T PRK06113 170 VRNMA----FDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA 235 (255)
T ss_pred HHHHH----HHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 99998 666553 999999999999876543222221211122 22569999999999999865
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-12 Score=104.53 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=91.3
Q ss_pred CCceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHH
Q psy818 78 PNGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 78 ~~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
.++++|+.|... .++.+.+.+.|+..+++| .+++++.+.|.++ + ++++|.++. .|+++|+++
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 155 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGL 155 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHH
Confidence 355677655322 234556667899999988 5678888888753 3 788888754 799999999
Q ss_pred HHHHhhccCcchhhhCcc-cccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 140 RSLRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.++++.++ .++.+. +||+|+||.++|++......+... ...... ....+|||||++++||++.+..
T Consensus 156 ~~l~~~la----~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~ 226 (252)
T PRK07856 156 LNLTRSLA----VEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLAS 226 (252)
T ss_pred HHHHHHHH----HHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccC
Confidence 99999999 777665 999999999999876432222111 111111 2246999999999999987643
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-12 Score=106.85 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=82.3
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
+.+.+.++|+..+++| .+++.+++.|.+.+ ++++|.++. .|+++|+|+.+++++++ .++.
T Consensus 118 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la----~e~~ 193 (278)
T PRK08277 118 FFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLA----VHFA 193 (278)
T ss_pred cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHH----HHhC
Confidence 4455667899999998 45778889887653 788888765 79999999999999999 6766
Q ss_pred c--ccccccCccchhhhhccccCCc------hhhHhHHh---hCCCCChHhHHHHHHHHhcC
Q psy818 156 P--DLVQSISPGLVKSQIFKSSLGD------KFDKSLYE---AHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 156 ~--~~vn~v~pg~~~t~~~~~~~~~------~~~~~~~~---~~~~~~pedvA~~v~fl~s~ 206 (214)
+ .+||+|+||.+.|++....... ........ ...+.+|||||++++||+|.
T Consensus 194 ~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~ 255 (278)
T PRK08277 194 KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADE 255 (278)
T ss_pred ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCc
Confidence 5 3999999999999875432110 11111111 12356999999999999997
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.2e-12 Score=103.82 Aligned_cols=114 Identities=21% Similarity=0.230 Sum_probs=82.3
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
+.+.+.++|...+++| .+++++++.|...+ ++++|..+. .|+++|+|+.++++.++ .++.
T Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la----~~~~ 178 (253)
T PRK08642 103 ADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLA----AELG 178 (253)
T ss_pred cccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHHHHHHHHHHHHH----HHhC
Confidence 4455667788888888 56888898886543 677776533 79999999999999999 6766
Q ss_pred cc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 156 PD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 156 ~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+. +||+|+||+++|+.......+......... ....+|+|||++++||++.++.
T Consensus 179 ~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 237 (253)
T PRK08642 179 PYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWAR 237 (253)
T ss_pred ccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhc
Confidence 54 999999999999754332222211111111 2256999999999999997643
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.4e-12 Score=109.67 Aligned_cols=126 Identities=12% Similarity=0.099 Sum_probs=90.9
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.+++ ++++|..+. .|+++|+|+.+
T Consensus 86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~ 165 (330)
T PRK06139 86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRG 165 (330)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHH
Confidence 4456644321 2235666778899999999 56788999998754 788888754 79999999999
Q ss_pred HHhhccCcchhhhCc---ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFP---DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~---~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .|+.+ .+|++|+||.++|++....... .........+..+|||+|+++++++..|++
T Consensus 166 ~~~sL~----~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~~pe~vA~~il~~~~~~~~ 231 (330)
T PRK06139 166 FSEALR----GELADHPDIHVCDVYPAFMDTPGFRHGANY-TGRRLTPPPPVYDPRRVAKAVVRLADRPRA 231 (330)
T ss_pred HHHHHH----HHhCCCCCeEEEEEecCCccCccccccccc-ccccccCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 999999 66543 4999999999999976432110 001111122356999999999999988765
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2e-12 Score=104.19 Aligned_cols=127 Identities=14% Similarity=0.124 Sum_probs=89.3
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++|+.|.. ..++.+.+.++|+..+++| .++++++++|.+.+ ++++|..+. .|+++|+++.
T Consensus 87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~ 166 (252)
T PRK07035 87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVI 166 (252)
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHH
Confidence 3455554432 1234455567788888888 56788889987653 678887653 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHh---hCCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYE---AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~---~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++++++ .++.+. +||+|+||.++|++.......... ..... .....+|||||++++||+|....
T Consensus 167 ~~~~~l~----~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 237 (252)
T PRK07035 167 SMTKAFA----KECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASS 237 (252)
T ss_pred HHHHHHH----HHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCcccc
Confidence 9999999 666653 999999999999886543322211 11111 12356999999999999997643
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.6e-12 Score=102.44 Aligned_cols=126 Identities=18% Similarity=0.188 Sum_probs=89.7
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++|+.|... .++.+.+.++|...+++| .+++++++.|.+++ ++++|.++. .|+++|+++.
T Consensus 69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 148 (235)
T PRK06550 69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALA 148 (235)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHH
Confidence 45667544321 345566677899999999 56888888887643 778887653 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+ .+||+|+||.++|++.......... ...... ....+|||+|++++||+|.+.
T Consensus 149 ~~~~~la----~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~ 218 (235)
T PRK06550 149 GFTKQLA----LDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKA 218 (235)
T ss_pred HHHHHHH----HHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhh
Confidence 9999999 66654 3999999999999876433222111 111111 224699999999999998764
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3e-12 Score=103.54 Aligned_cols=126 Identities=15% Similarity=0.204 Sum_probs=90.7
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|...+++| .++++++++|.+++ ++++|.++. .|+++|+++.+
T Consensus 90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~ 169 (257)
T PRK09242 90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQ 169 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHHHH
Confidence 4466765532 1235566778899999998 56888899997643 788888754 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhh-HhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFD-KSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+ .+||+|+||.++|++.......... ....... ...+|||||.+++||++...
T Consensus 170 ~~~~la----~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 238 (257)
T PRK09242 170 MTRNLA----VEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAA 238 (257)
T ss_pred HHHHHH----HHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999999 66644 3999999999999986543322221 1111222 24599999999999998653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3e-12 Score=103.61 Aligned_cols=126 Identities=12% Similarity=0.156 Sum_probs=88.4
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-----HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-----DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-----~Y~a~K~a~~~~ 142 (214)
+.++|+.|.. ..++.+.+.++|...+++| .+++.+++.|.+++ +++||.++. .|+++|+|+.++
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y~~sK~a~~~~ 165 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPYSAAKGGVNAL 165 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCccHHHHHHHHHH
Confidence 4466755432 2346667778899999988 46788999997653 788888653 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhcccc-----CCc--h-----hhHhHHhhC---CCCChHhHHHHHHHHhc
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS-----LGD--K-----FDKSLYEAH---PCLQAEDIANTVEFILS 205 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~-----~~~--~-----~~~~~~~~~---~~~~pedvA~~v~fl~s 205 (214)
++.++ .++.+. +||+|+||.+.|++.... ... . ......... ..++|||||++++||+|
T Consensus 166 ~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 241 (260)
T PRK12823 166 TASLA----FEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLAS 241 (260)
T ss_pred HHHHH----HHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcC
Confidence 99999 666553 999999999999752110 000 0 001111111 24689999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
...
T Consensus 242 ~~~ 244 (260)
T PRK12823 242 DEA 244 (260)
T ss_pred ccc
Confidence 753
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-12 Score=105.21 Aligned_cols=123 Identities=15% Similarity=0.174 Sum_probs=88.4
Q ss_pred CceecCCCc-eeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTR-LCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~-ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+-|. ...++.+.+.++|+.++++| .+.+++++.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 177 (256)
T PRK12859 98 HILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDA 177 (256)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCCchHHHHHHHHHHH
Confidence 445554442 12345667778899999999 45678889987543 788888865 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .++.+ .+||+|+||.++|++... ......... ....+|+|+|++++||++...+
T Consensus 178 l~~~la----~~~~~~~i~v~~v~PG~i~t~~~~~----~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~ 242 (256)
T PRK12859 178 LTSSLA----AEVAHLGITVNAINPGPTDTGWMTE----EIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAE 242 (256)
T ss_pred HHHHHH----HHhhhhCeEEEEEEEccccCCCCCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 999999 66655 399999999999985431 111111111 2245999999999999987644
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.4e-12 Score=102.50 Aligned_cols=126 Identities=15% Similarity=0.201 Sum_probs=87.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|..- .++.+.+.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~ 161 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVA 161 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHH
Confidence 44556443221 224445557898889988 5688888888653 2 778887643 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHH---hhCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLY---EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~---~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+. +||+|+||.+.|++.+........ .... ......+|||||++++||+|.+.
T Consensus 162 ~~~~~la----~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 231 (248)
T TIGR01832 162 GLTKLLA----NEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSAS 231 (248)
T ss_pred HHHHHHH----HHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 9999999 677653 999999999999976432211111 1111 12235699999999999998654
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.2e-12 Score=103.13 Aligned_cols=127 Identities=16% Similarity=0.160 Sum_probs=89.9
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|...+++| .+++++.+.|.+.+ ++++|.++. .|+++|+|+.+
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 170 (255)
T PRK06841 91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVG 170 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHH
Confidence 4566755532 2334455567888888888 66888888887643 778887643 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++.++ .++.+ .+||+|+||.++|++................ ....+|||+|++++||++.++.
T Consensus 171 ~~~~la----~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 239 (255)
T PRK06841 171 MTKVLA----LEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAA 239 (255)
T ss_pred HHHHHH----HHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 999999 66654 3999999999999876533221111111111 2356999999999999997644
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.5e-12 Score=99.39 Aligned_cols=119 Identities=8% Similarity=0.070 Sum_probs=87.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
++++|+.|.. ..++.+.+.++|...+++| .+++++.+.|.+.+ ++++|..+. .|+++|+|+.+++
T Consensus 57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~ 136 (199)
T PRK07578 57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFV 136 (199)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHH
Confidence 4566654421 2335566677899999988 56888899998766 677877754 7999999999999
Q ss_pred hhccCcchhhhC-cccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 144 FNLNDKNFCELF-PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 144 ~~l~~~~~~e~~-~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++ .|+. +.+||+|+||.++|++... ........+++|||+|+.+.++++...
T Consensus 137 ~~la----~e~~~gi~v~~i~Pg~v~t~~~~~-------~~~~~~~~~~~~~~~a~~~~~~~~~~~ 191 (199)
T PRK07578 137 KAAA----LELPRGIRINVVSPTVLTESLEKY-------GPFFPGFEPVPAARVALAYVRSVEGAQ 191 (199)
T ss_pred HHHH----HHccCCeEEEEEcCCcccCchhhh-------hhcCCCCCCCCHHHHHHHHHHHhccce
Confidence 9999 5552 2399999999999876421 011122235799999999999998753
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.9e-12 Score=102.02 Aligned_cols=127 Identities=13% Similarity=0.122 Sum_probs=88.0
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. -.++.+.+.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+.
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~ 159 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL 159 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence 4566654421 1245566778899999999 5688898888653 3 788888765 6999999999
Q ss_pred HHHhhccCcchhhhCc---ccccccCccchhhhh-ccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFP---DLVQSISPGLVKSQI-FKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~---~~vn~v~pg~~~t~~-~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++++++ .++.+ .+||+|+||.++|.. .......+. ....... ....+|||+|+++.||++.+++
T Consensus 160 ~~~~~la----~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 232 (252)
T PRK07677 160 AMTRTLA----VEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAA 232 (252)
T ss_pred HHHHHHH----HHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 9999999 66643 499999999998542 221111111 1111111 1256999999999999987543
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.2e-12 Score=105.10 Aligned_cols=128 Identities=13% Similarity=0.106 Sum_probs=91.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|.+++ ++++|.++. .|+++|+++.++
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~ 166 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAF 166 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHHHHHH
Confidence 44566544321 245667778899999999 66888999886643 788888754 899999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccCCc-hhhHhHHhh-----CCCCChHhHHHHHHHHhcCCCcc
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD-KFDKSLYEA-----HPCLQAEDIANTVEFILSSPPHV 210 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~-~~~~~~~~~-----~~~~~pedvA~~v~fl~s~p~~~ 210 (214)
+++++ .++.+ .+||+++||.++|++....... ......... ...++|||+|++++++++.....
T Consensus 167 ~~~l~----~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~ 238 (296)
T PRK05872 167 ANALR----LEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARR 238 (296)
T ss_pred HHHHH----HHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCE
Confidence 99999 55544 3999999999999986543222 111111111 12469999999999999876543
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.6e-12 Score=101.62 Aligned_cols=125 Identities=11% Similarity=0.142 Sum_probs=88.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~ 142 (214)
+.++|+.|..- .+..+.+.++|+..+++| .+++.+.+.|...+ ++++|..+. .|+++|+++.++
T Consensus 77 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~ 156 (237)
T PRK12742 77 DILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGM 156 (237)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHH
Confidence 44666544321 234455667899999999 45678888887655 777877652 799999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhH---HhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSL---YEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~---~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++.++ .++.+ .+||+|+||.++|++..... ...... .......+|||+|+++.||+|....
T Consensus 157 ~~~la----~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~ 222 (237)
T PRK12742 157 ARGLA----RDFGPRGITINVVQPGPIDTDANPANG--PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEAS 222 (237)
T ss_pred HHHHH----HHHhhhCeEEEEEecCcccCCcccccc--HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence 99998 66655 49999999999998754311 111111 1112356999999999999987643
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.8e-12 Score=101.50 Aligned_cols=104 Identities=16% Similarity=0.108 Sum_probs=77.7
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
..+.+.+.|..++++| .+++.+++.|.++ + +++||.++. .|+++|+|+.+++++++ .++
T Consensus 93 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la----~el 168 (246)
T PRK05599 93 RAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLA----DSL 168 (246)
T ss_pred hhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHH----HHh
Confidence 3344445666777777 4467788888653 3 788998765 79999999999999999 666
Q ss_pred Ccc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 155 FPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 155 ~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
.+. +||+++||.++|++...... .....+|||+|+.++++++...
T Consensus 169 ~~~~I~v~~v~PG~v~T~~~~~~~~---------~~~~~~pe~~a~~~~~~~~~~~ 215 (246)
T PRK05599 169 HGSHVRLIIARPGFVIGSMTTGMKP---------APMSVYPRDVAAAVVSAITSSK 215 (246)
T ss_pred cCCCceEEEecCCcccchhhcCCCC---------CCCCCCHHHHHHHHHHHHhcCC
Confidence 543 99999999999997542110 0013689999999999998753
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2e-12 Score=105.05 Aligned_cols=112 Identities=14% Similarity=0.200 Sum_probs=80.6
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD 157 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~ 157 (214)
+.+.++|+.++++| .+++++.+.|.+++ ++++|.++. .|+++|+|+.+++++++ .++.+.
T Consensus 104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la----~e~~~~ 179 (266)
T PRK06171 104 ELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWA----KELGKH 179 (266)
T ss_pred cCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHH----HHhhhc
Confidence 45667899999998 66888999997653 788888754 79999999999999999 666653
Q ss_pred --cccccCccchh-hhhccccC----------CchhhHhHHh------hCCCCChHhHHHHHHHHhcCCCc
Q psy818 158 --LVQSISPGLVK-SQIFKSSL----------GDKFDKSLYE------AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 158 --~vn~v~pg~~~-t~~~~~~~----------~~~~~~~~~~------~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+||+|+||.++ |++..... ......+... ....++|||||++++||+|..++
T Consensus 180 gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~ 250 (266)
T PRK06171 180 NIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRAS 250 (266)
T ss_pred CeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccc
Confidence 99999999986 55432110 0011111111 12356999999999999997544
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.3e-12 Score=102.74 Aligned_cols=107 Identities=14% Similarity=0.121 Sum_probs=79.8
Q ss_pred CCCCcCcccHH-----HHHHHHHHhhccC----C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc-
Q psy818 97 PDTWNPAWSVS-----TILTGLLSFMVER----S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD- 157 (214)
Q Consensus 97 ~e~w~~~~~vn-----~~l~a~~~~m~~~----~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~- 157 (214)
.++|+..+++| .+++.+++.|.+. + ++++|.++. .|+++|+|+.+++++++ .++.+.
T Consensus 111 ~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la----~e~~~~~ 186 (256)
T TIGR01500 111 STQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLA----LEEKNPN 186 (256)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHHHHH----HHhcCCC
Confidence 36788999999 5678899998753 3 688888754 79999999999999999 666553
Q ss_pred -cccccCccchhhhhccccCC---chhh----HhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 158 -LVQSISPGLVKSQIFKSSLG---DKFD----KSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 158 -~vn~v~pg~~~t~~~~~~~~---~~~~----~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+||+|+||+++|++...... +... .........++|||+|++++||++..
T Consensus 187 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~~~~ 244 (256)
T TIGR01500 187 VRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLLEKD 244 (256)
T ss_pred eEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC
Confidence 99999999999998653211 1111 11112234679999999999999753
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-11 Score=99.24 Aligned_cols=109 Identities=16% Similarity=0.067 Sum_probs=77.6
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC----------------------------------cHHHHHH
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM----------------------------------SDYERRQ 136 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~----------------------------------~~Y~a~K 136 (214)
+.|+.++++| .+++.+++.|...+ +++||.++ ..|+++|
T Consensus 62 ~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 141 (241)
T PRK12428 62 APVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSK 141 (241)
T ss_pred CCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence 5688899988 57888899887655 78888754 1799999
Q ss_pred HHHHHHHhhcc-CcchhhhCcccccccCccchhhhhccccCCc---hhhHh-HHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 137 LAARSLRFNLN-DKNFCELFPDLVQSISPGLVKSQIFKSSLGD---KFDKS-LYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 137 ~a~~~~~~~l~-~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~---~~~~~-~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+.++++.++ .+ ..-.+.|||+|+||.+.|++....... ..... ........+|||||++++||+|.+.
T Consensus 142 ~a~~~~~~~la~~e--~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~ 216 (241)
T PRK12428 142 EALILWTMRQAQPW--FGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAA 216 (241)
T ss_pred HHHHHHHHHHHHHh--hhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhh
Confidence 99999999998 43 122234999999999999986542211 00001 0111224689999999999998654
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.4e-12 Score=101.52 Aligned_cols=126 Identities=16% Similarity=0.215 Sum_probs=88.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.+.|+..+++| .+++++++.|.+. + ++++|.++. .|+++|+|+.
T Consensus 87 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~ 166 (261)
T PRK08936 87 DVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVK 166 (261)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHH
Confidence 45667544322 124455667899999999 4567888888653 3 788887653 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+ .+||+|+||.++|++......... ....... ....+|||+|+++.||+|.+.
T Consensus 167 ~~~~~la----~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 236 (261)
T PRK08936 167 LMTETLA----MEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEA 236 (261)
T ss_pred HHHHHHH----HHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 9999999 56654 399999999999997643222211 1111111 224599999999999999754
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.3e-12 Score=106.89 Aligned_cols=126 Identities=20% Similarity=0.257 Sum_probs=90.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|.+++ +++||..+. .|+++|+++.+
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~ 166 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRG 166 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHH
Confidence 4456654422 2335566778899999998 56889999998753 889998765 79999999999
Q ss_pred HHhhccCcchhhhC----cccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELF----PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~----~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .|+. +.+|++|+||.++|++...... ..........+..+|||||++++|+++.|.+
T Consensus 167 ~~~~l~----~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~-~~~~~~~~~~~~~~pe~vA~~i~~~~~~~~~ 233 (334)
T PRK07109 167 FTDSLR----CELLHDGSPVSVTMVQPPAVNTPQFDWARS-RLPVEPQPVPPIYQPEVVADAILYAAEHPRR 233 (334)
T ss_pred HHHHHH----HHHhhcCCCeEEEEEeCCCccCchhhhhhh-hccccccCCCCCCCHHHHHHHHHHHHhCCCc
Confidence 999999 5543 3489999999999987643110 0000000112346999999999999998754
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.9e-12 Score=100.78 Aligned_cols=126 Identities=13% Similarity=0.143 Sum_probs=88.9
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|..- .++.+.+.++|+.++++| .+++++++.|.+++ ++++|..+. .|+++|+|+.
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~ 165 (253)
T PRK06172 86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVI 165 (253)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHH
Confidence 44666544321 224556668899999988 45678888886543 778887654 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCC-chhh-HhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG-DKFD-KSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~-~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+ .+|++|+||.++|++...... .... ...... ....+|+|+|+.++||++...
T Consensus 166 ~~~~~la----~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~ 236 (253)
T PRK06172 166 GLTKSAA----IEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGA 236 (253)
T ss_pred HHHHHHH----HHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccc
Confidence 9999999 67755 399999999999998764322 1111 111111 224699999999999999753
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.9e-12 Score=102.36 Aligned_cols=126 Identities=17% Similarity=0.242 Sum_probs=87.8
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a 138 (214)
++++|+.|... ..+.+.+.++|...+++| .+++++++.|.+.+ ++++|.++. .|+++|+|
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a 158 (260)
T PRK06523 79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAA 158 (260)
T ss_pred CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHH
Confidence 55666544321 224455667899999999 56788899997653 778887643 79999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCC--------c-hh-hHhHH------hhCCCCChHhHHHHH
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG--------D-KF-DKSLY------EAHPCLQAEDIANTV 200 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~--------~-~~-~~~~~------~~~~~~~pedvA~~v 200 (214)
+.++++.++ .++.+. +||+|+||.++|++...... + .. ..... ......+|||||+++
T Consensus 159 ~~~l~~~~a----~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~ 234 (260)
T PRK06523 159 LSTYSKSLS----KEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELI 234 (260)
T ss_pred HHHHHHHHH----HHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHH
Confidence 999999999 677653 99999999999987532110 0 00 01110 111246999999999
Q ss_pred HHHhcCCC
Q psy818 201 EFILSSPP 208 (214)
Q Consensus 201 ~fl~s~p~ 208 (214)
+||+|...
T Consensus 235 ~~l~s~~~ 242 (260)
T PRK06523 235 AFLASDRA 242 (260)
T ss_pred HHHhCccc
Confidence 99998653
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.7e-12 Score=101.07 Aligned_cols=126 Identities=17% Similarity=0.235 Sum_probs=89.2
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|..- .++.+.+.++|+..+++| .+++++.+.|.+.+ ++++|.++. .|+++|+|+.
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~ 165 (255)
T PRK05717 86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLL 165 (255)
T ss_pred CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence 55677654321 234456667899999999 67888899886653 788887754 7999999999
Q ss_pred HHHhhccCcchhhhCcc-cccccCccchhhhhccccCCchhhH---hHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFDK---SLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~~---~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+. +||+++||.++|++........... ........++|+|||++++||++...
T Consensus 166 ~~~~~la----~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 233 (255)
T PRK05717 166 ALTHALA----ISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQA 233 (255)
T ss_pred HHHHHHH----HHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 9999999 666554 9999999999998643221111111 01111235699999999999998653
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7e-12 Score=101.25 Aligned_cols=126 Identities=13% Similarity=0.185 Sum_probs=89.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++.+.|.+++ ++++|..+. .|+++|+++.+
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~ 168 (255)
T PRK07523 89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGN 168 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHHH
Confidence 44666544332 234455667899999999 57888888887643 778887643 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHh-h---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYE-A---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~-~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+ .+||+|+||.++|++............... . ....+|||||++++||++...
T Consensus 169 ~~~~~a----~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 237 (255)
T PRK07523 169 LTKGMA----TDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDAS 237 (255)
T ss_pred HHHHHH----HHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 999999 66554 399999999999997654322221111111 1 225589999999999998653
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.2e-11 Score=99.64 Aligned_cols=131 Identities=24% Similarity=0.356 Sum_probs=90.9
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|.-|.. ..+..+.+.++|+.++++| .+++.+++.|.+.+ +++||.++. .|+++|+++.
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~ 155 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVR 155 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHH
Confidence 4466654421 1234455667888999988 56888899887654 678887644 8999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhc-cccC-Cch-hhHhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIF-KSSL-GDK-FDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~-~~~~-~~~-~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
++++.++ .++.+ .+||+|+||.+.+... .... ... ..........+++|||||++++||++.|.+..+.
T Consensus 156 ~~~~~l~----~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~ 229 (248)
T PRK10538 156 QFSLNLR----TDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAHVNIN 229 (248)
T ss_pred HHHHHHH----HHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCcccch
Confidence 9999999 66655 3999999999974433 2111 111 1111222334679999999999999999887654
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-11 Score=101.92 Aligned_cols=126 Identities=17% Similarity=0.193 Sum_probs=89.1
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.. ..++.+.+.++|...+++| .+++++.+.|...+ ++++|.++. .|+++|+|+.++
T Consensus 126 D~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l 205 (290)
T PRK06701 126 DILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAF 205 (290)
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence 4456644321 1235556667888999998 66888888886655 788887754 799999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++ .++.+ .+|++|+||.++|++............... ....++|+|||++++||++..+
T Consensus 206 ~~~la----~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~ 272 (290)
T PRK06701 206 TRSLA----QSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDS 272 (290)
T ss_pred HHHHH----HHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCccc
Confidence 99999 66654 399999999999987653222211111111 1225689999999999999764
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.6e-12 Score=101.05 Aligned_cols=127 Identities=14% Similarity=0.169 Sum_probs=88.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++.+++.|.+. + ++++|.++. .|+++|+++.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR 160 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence 4466655432 2335555667899999988 4577888888653 2 678887653 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCC--------chh--hHhHHhh---CCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG--------DKF--DKSLYEA---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~--------~~~--~~~~~~~---~~~~~pedvA~~v~fl~s 205 (214)
++++.++ .++.+. +||+|+||.++|++...... ... ....... ..+.+|||||++++||+|
T Consensus 161 ~~~~~la----~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~ 236 (256)
T PRK08643 161 GLTQTAA----RDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAG 236 (256)
T ss_pred HHHHHHH----HHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999 666554 99999999999987643210 000 1111111 224589999999999998
Q ss_pred CCCc
Q psy818 206 SPPH 209 (214)
Q Consensus 206 ~p~~ 209 (214)
....
T Consensus 237 ~~~~ 240 (256)
T PRK08643 237 PDSD 240 (256)
T ss_pred cccc
Confidence 7643
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-11 Score=110.73 Aligned_cols=127 Identities=17% Similarity=0.134 Sum_probs=91.2
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.++ + +++||.++. .|+++|+|+.
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~ 473 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVL 473 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHH
Confidence 4456644422 1235667778999999999 6688999999764 3 789998865 8999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCC----chhh---HhHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG----DKFD---KSLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~----~~~~---~~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+ .+|++|+||.++|++...... .+.. ..... .....+|||||++++++++.+.
T Consensus 474 ~~~~~l~----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 474 MLSECLR----AELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNK 549 (582)
T ss_pred HHHHHHH----HHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence 9999999 66654 399999999999988654211 0000 01111 1123599999999999998865
Q ss_pred c
Q psy818 209 H 209 (214)
Q Consensus 209 ~ 209 (214)
.
T Consensus 550 ~ 550 (582)
T PRK05855 550 A 550 (582)
T ss_pred C
Confidence 4
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-11 Score=100.92 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=87.9
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--C--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--S--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
+.++|+.|... .++.+.+.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 175 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAV 175 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHH
Confidence 45667544321 235566678899999999 5678888888654 3 788887753 799999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCch-----hhH---hHHh-h----CCCCChHhHHHHHHHHh
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDK-----FDK---SLYE-A----HPCLQAEDIANTVEFIL 204 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~-----~~~---~~~~-~----~~~~~pedvA~~v~fl~ 204 (214)
.++++.++ .++.+ .+||+++||.+.|++........ ... .... . ...++|+|||++++||+
T Consensus 176 ~~~~~~la----~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~ 251 (280)
T PLN02253 176 LGLTRSVA----AELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLA 251 (280)
T ss_pred HHHHHHHH----HHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhc
Confidence 99999999 66654 39999999999998643221111 000 0101 1 12368999999999999
Q ss_pred cCCC
Q psy818 205 SSPP 208 (214)
Q Consensus 205 s~p~ 208 (214)
|...
T Consensus 252 s~~~ 255 (280)
T PLN02253 252 SDEA 255 (280)
T ss_pred Cccc
Confidence 8654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-11 Score=109.00 Aligned_cols=126 Identities=18% Similarity=0.204 Sum_probs=90.7
Q ss_pred CceecCCCcee----eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--C---CCCCCCcCc-------HHHHHHH
Q psy818 79 NGRFKTNTRLC----LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--S---PTLGSIEMS-------DYERRQL 137 (214)
Q Consensus 79 ~~~~h~ng~ic----~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--~---v~i~S~a~~-------~Y~a~K~ 137 (214)
++++|+-| ++ .++.+.+.++|+.++++| .++++++++|.++ + ++++|.++. .|+++|+
T Consensus 81 D~li~nag-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKa 159 (520)
T PRK06484 81 DVLVNNAG-VTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKA 159 (520)
T ss_pred CEEEECCC-cCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHH
Confidence 44566433 32 235566778899999999 5789999999653 2 788888765 8999999
Q ss_pred HHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchh--hHhHH---hhCCCCChHhHHHHHHHHhcCCCc
Q psy818 138 AARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF--DKSLY---EAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 138 a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~--~~~~~---~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
|+.+++++++ .|+.+. +|++|+||.++|++......... ..... ......+|||||++++||++.+..
T Consensus 160 al~~l~~~la----~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~ 234 (520)
T PRK06484 160 AVISLTRSLA----CEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQAS 234 (520)
T ss_pred HHHHHHHHHH----HHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999999 777653 99999999999998653221111 11111 112245999999999999997643
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=6e-12 Score=100.39 Aligned_cols=114 Identities=12% Similarity=0.055 Sum_probs=82.2
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc----HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS----DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~----~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|...+++| .+++.++++|.++ + ++++|..+. .|+++|+|+.++
T Consensus 85 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~Y~asKaal~~~ 164 (227)
T PRK08862 85 DVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQDLTGVESSNALVSGF 164 (227)
T ss_pred CEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCcchhHHHHHHHHHH
Confidence 45666655433 235566667888887777 4578889999753 3 788887655 799999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++++ .|+.+ .|||+|+||+++|+... ........ -||++.++.||+|.+
T Consensus 165 ~~~la----~el~~~~Irvn~v~PG~i~t~~~~---~~~~~~~~--------~~~~~~~~~~l~~~~ 216 (227)
T PRK08862 165 THSWA----KELTPFNIRVGGVVPSIFSANGEL---DAVHWAEI--------QDELIRNTEYIVANE 216 (227)
T ss_pred HHHHH----HHHhhcCcEEEEEecCcCcCCCcc---CHHHHHHH--------HHHHHhheeEEEecc
Confidence 99999 67765 39999999999998321 11111111 179999999999854
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.5e-11 Score=99.37 Aligned_cols=127 Identities=18% Similarity=0.237 Sum_probs=88.5
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|..+. ++.+.+.++|+.++++| .+++++.+.|.++ + ++++|..+. .|+++|+++.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 161 (257)
T PRK07067 82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVI 161 (257)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHH
Confidence 456676554432 35555667898888888 6688888888654 2 678887543 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccC---------CchhhH-hHHhh---CCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---------GDKFDK-SLYEA---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---------~~~~~~-~~~~~---~~~~~pedvA~~v~fl~s 205 (214)
++++.++ .++.+. +||+|.||.++|++.+... ...... ..... ....+|||||++++||++
T Consensus 162 ~~~~~la----~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 237 (257)
T PRK07067 162 SYTQSAA----LALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS 237 (257)
T ss_pred HHHHHHH----HHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhC
Confidence 9999999 666544 9999999999998754311 000111 11111 225589999999999999
Q ss_pred CCCc
Q psy818 206 SPPH 209 (214)
Q Consensus 206 ~p~~ 209 (214)
.+..
T Consensus 238 ~~~~ 241 (257)
T PRK07067 238 ADAD 241 (257)
T ss_pred cccc
Confidence 7643
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.1e-11 Score=98.65 Aligned_cols=125 Identities=16% Similarity=0.193 Sum_probs=87.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... ..+.+.+.++|..++++| .+++++.+.|.++ + ++++|..+. .|+++|+++.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 161 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALG 161 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHH
Confidence 44666554321 234455667899999998 5678888888653 2 778887654 8999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+ .+||+|+||.++|++..... .......... ....+|||||+++.||++.+.
T Consensus 162 ~l~~~la----~~~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 229 (256)
T PRK12743 162 GLTKAMA----LELVEHGILVNAVAPGAIATPMNGMDD-SDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGA 229 (256)
T ss_pred HHHHHHH----HHhhhhCeEEEEEEeCCccCccccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 9999999 66654 49999999999998764321 1111111111 224699999999999998654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.2e-11 Score=99.00 Aligned_cols=127 Identities=14% Similarity=0.211 Sum_probs=89.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|..++++| .+++.+++.|.+.+ ++++|.++. .|+++|+|+.+
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~ 168 (265)
T PRK07097 89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKM 168 (265)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHH
Confidence 5566755422 1234566667899999998 56788899887653 778887643 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCC-----c--hhhHhHHh---hCCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG-----D--KFDKSLYE---AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~-----~--~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .++.+ .+||+|+||.+.|++...... . ........ ....++|+|+|++++||++.+++
T Consensus 169 l~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 244 (265)
T PRK07097 169 LTKNIA----SEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASN 244 (265)
T ss_pred HHHHHH----HHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccC
Confidence 999999 66654 499999999999987643211 1 11111111 12356899999999999997543
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2e-11 Score=101.58 Aligned_cols=123 Identities=13% Similarity=0.172 Sum_probs=85.8
Q ss_pred CceecCCCceee--ecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---------C--CCCCCCcCc-------HHH
Q psy818 79 NGRFKTNTRLCL--SMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---------S--PTLGSIEMS-------DYE 133 (214)
Q Consensus 79 ~~~~h~ng~ic~--~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---------~--v~i~S~a~~-------~Y~ 133 (214)
++++|+.| +.. .+.+.+.++|+..+++| .+++++.++|.++ + ++++|.++. .|+
T Consensus 91 D~li~nAG-~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 169 (306)
T PRK07792 91 DIVVNNAG-ITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYG 169 (306)
T ss_pred CEEEECCC-CCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHH
Confidence 55666544 332 35566678899999998 5678888888642 3 678887754 799
Q ss_pred HHHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 134 RRQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++|+|+.++++.++ .++.+ .+||+|+||. .|.+.......... .......+++|||||.+++||+|...
T Consensus 170 asKaal~~l~~~la----~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~-~~~~~~~~~~pe~va~~v~~L~s~~~ 240 (306)
T PRK07792 170 AAKAGITALTLSAA----RALGRYGVRANAICPRA-RTAMTADVFGDAPD-VEAGGIDPLSPEHVVPLVQFLASPAA 240 (306)
T ss_pred HHHHHHHHHHHHHH----HHhhhcCeEEEEECCCC-CCchhhhhccccch-hhhhccCCCCHHHHHHHHHHHcCccc
Confidence 99999999999999 66654 4999999994 77765432211110 00112335799999999999998654
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.1e-11 Score=98.28 Aligned_cols=104 Identities=17% Similarity=0.136 Sum_probs=72.5
Q ss_pred CCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 99 TWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 99 ~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
+|..++++| .+++++.+.|... + ++++|..+. .|+++|+|+.+++++++ .++.+
T Consensus 118 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la----~e~~~ 193 (267)
T TIGR02685 118 QVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAA----LELAP 193 (267)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCCcccchhHHHHHHHHHHHHHHH----HHHhh
Confidence 377888888 5678888888542 1 566666543 89999999999999999 66655
Q ss_pred --ccccccCccchhhhhccccCCchhhHhHHhh----CCCCChHhHHHHHHHHhcCCCc
Q psy818 157 --DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA----HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 157 --~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.+||+|+||.+.|+... ........... ....+|||+|++++||++.++.
T Consensus 194 ~gi~v~~v~PG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 249 (267)
T TIGR02685 194 LQIRVNGVAPGLSLLPDAM---PFEVQEDYRRKVPLGQREASAEQIADVVIFLVSPKAK 249 (267)
T ss_pred hCeEEEEEecCCccCcccc---chhHHHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccC
Confidence 39999999998655221 11111111111 1246999999999999987644
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.5e-11 Score=98.31 Aligned_cols=113 Identities=16% Similarity=0.249 Sum_probs=79.6
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHH-HhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLL-SFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~-~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
+.+.+.++|+.++++| .++++++ +.+.+++ ++++|.++. .|+++|+|+.+++++++ .++
T Consensus 92 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la----~e~ 167 (239)
T TIGR01831 92 FPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALA----VEL 167 (239)
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHH----HHH
Confidence 4455667899999988 3456554 4444322 778887643 89999999999999999 555
Q ss_pred Cc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCcc
Q psy818 155 FP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPHV 210 (214)
Q Consensus 155 ~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~~ 210 (214)
.+ .+|++++||.++|++..... + ........ ....+|||+|++++||++.+++.
T Consensus 168 ~~~gi~v~~v~Pg~v~t~~~~~~~-~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 226 (239)
T TIGR01831 168 AKRKITVNCIAPGLIDTEMLAEVE-H-DLDEALKTVPMNRMGQPAEVASLAGFLMSDGASY 226 (239)
T ss_pred hHhCeEEEEEEEccCccccchhhh-H-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcC
Confidence 44 39999999999999875321 1 11111111 23569999999999999976543
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.1e-11 Score=98.05 Aligned_cols=127 Identities=14% Similarity=0.146 Sum_probs=89.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|..|... ..+.+.+.++|..++++| .+++++.+.|.+. + ++++|.++. .|+++|+++.
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 168 (263)
T PRK07814 89 DIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALA 168 (263)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHHH
Confidence 55777654321 224556667888899988 5678888888653 2 788887764 8999999999
Q ss_pred HHHhhccCcchhhhCcc-cccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++.++ .++.+. +||+|+||.+.|++.......... ...... ....+|||||++++|+++..+.
T Consensus 169 ~~~~~~~----~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 238 (263)
T PRK07814 169 HYTRLAA----LDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGS 238 (263)
T ss_pred HHHHHHH----HHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 9999999 666665 999999999999865432111111 111111 2245999999999999986543
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.5e-11 Score=96.31 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=89.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++.+.|...+ ++++|.++. .|+++|+++.+++
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~ 164 (245)
T PRK12937 85 DVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLV 164 (245)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHHHH
Confidence 45677655432 234455567898888888 55788888887655 777877643 7999999999999
Q ss_pred hhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCCCc
Q psy818 144 FNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 144 ~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~~ 209 (214)
+.++ .++.+ .+|++|+||+++|++................. ...+|+|+|++++||++.+..
T Consensus 165 ~~~a----~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~ 231 (245)
T PRK12937 165 HVLA----NELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGA 231 (245)
T ss_pred HHHH----HHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 9998 56554 38999999999999854322222222222222 245999999999999987643
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-11 Score=97.69 Aligned_cols=107 Identities=11% Similarity=0.121 Sum_probs=78.6
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcC----------cHHHHHHHHHHHHHhhccCcchh
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEM----------SDYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~----------~~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
+.+.+.+.|...+++| .+++.+++.|.+.+ ++++|..+ ..|+++|+|+.+++++++ .
T Consensus 89 ~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la----~ 164 (235)
T PRK09009 89 LQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLS----I 164 (235)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHH----H
Confidence 3445556788889988 67889999887653 45555432 179999999999999999 5
Q ss_pred hhC----cccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 153 ELF----PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 153 e~~----~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++. ..+||+|+||.++|++..... .........+|||+|+.++|+++.+.
T Consensus 165 e~~~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~a~~~~~l~~~~~ 218 (235)
T PRK09009 165 EWQRSLKHGVVLALHPGTTDTALSKPFQ------QNVPKGKLFTPEYVAQCLLGIIANAT 218 (235)
T ss_pred HhhcccCCeEEEEEcccceecCCCcchh------hccccCCCCCHHHHHHHHHHHHHcCC
Confidence 544 349999999999999864311 01111224699999999999999864
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.3e-11 Score=101.90 Aligned_cols=103 Identities=14% Similarity=0.075 Sum_probs=81.1
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHHHHHHHhhccCcchhh
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLAARSLRFNLNDKNFCE 153 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a~~~~~~~l~~~~~~e 153 (214)
+.+.+.++|+.++++| .++++++|.|.+++ +++||.++. .|+++|+|+.+++++++ .|
T Consensus 150 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~----~E 225 (320)
T PLN02780 150 FHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLY----VE 225 (320)
T ss_pred cccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHH----HH
Confidence 5566778899999999 67899999997654 788887652 79999999999999999 77
Q ss_pred hCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 154 LFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 154 ~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+.+ .+|++|+||.++|++.... . ......+||++|+.++..+...
T Consensus 226 l~~~gI~V~~v~PG~v~T~~~~~~--~-------~~~~~~~p~~~A~~~~~~~~~~ 272 (320)
T PLN02780 226 YKKSGIDVQCQVPLYVATKMASIR--R-------SSFLVPSSDGYARAALRWVGYE 272 (320)
T ss_pred HhccCeEEEEEeeCceecCccccc--C-------CCCCCCCHHHHHHHHHHHhCCC
Confidence 765 3999999999999986421 0 0111368999999999888653
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4e-11 Score=96.79 Aligned_cols=126 Identities=13% Similarity=0.144 Sum_probs=86.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----------C--CCCCCCcCc-------HHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----------S--PTLGSIEMS-------DYE 133 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----------~--v~i~S~a~~-------~Y~ 133 (214)
++++|..|.. ..++.+.+.++|+.++++| .+++++.+.|.+. + ++++|..+. .|+
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 167 (258)
T PRK06949 88 DILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYC 167 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHH
Confidence 4456644321 1224455567788888888 5677788777533 2 567776643 799
Q ss_pred HHHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHH---hhCCCCChHhHHHHHHHHhcCCC
Q psy818 134 RRQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLY---EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~---~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++|+++.++++.++ .++.+ .+|++|+||.++|++.............. ......+|||||+++.||+|.++
T Consensus 168 ~sK~a~~~~~~~la----~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~ 243 (258)
T PRK06949 168 MSKAAVVHMTRAMA----LEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADES 243 (258)
T ss_pred HHHHHHHHHHHHHH----HHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence 99999999999998 56544 39999999999998765332222111111 22236699999999999999654
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.8e-11 Score=97.34 Aligned_cols=125 Identities=17% Similarity=0.193 Sum_probs=85.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++.+.|.+.+ ++++|..+. .|+++|+++.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~ 163 (263)
T PRK08226 84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIV 163 (263)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHH
Confidence 44666555322 234455567788888888 56778888886543 677776542 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCC-------chhhHhHHhhCC---CCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG-------DKFDKSLYEAHP---CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~-------~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p 207 (214)
++++.++ .++.+ .+||+|+||.++|++...... ...........+ ..+|||||+++.||+|..
T Consensus 164 ~~~~~la----~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~ 238 (263)
T PRK08226 164 GLTKSLA----VEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDE 238 (263)
T ss_pred HHHHHHH----HHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCch
Confidence 9999999 66654 399999999999987643211 111111111112 459999999999999864
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.14 E-value=4e-11 Score=96.45 Aligned_cols=126 Identities=18% Similarity=0.254 Sum_probs=86.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|... .++.+.+.++|...+++| .+++++.+.|.+++ ++++|..+. .|+++|+++.+
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 157 (252)
T PRK08220 78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTS 157 (252)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHH
Confidence 44566544322 234455667888889888 56888888887653 677777643 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchh---------hHhHH---hhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKF---------DKSLY---EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~---------~~~~~---~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+||+++||.+.|++......... ..... ....+++|||||++++||++..
T Consensus 158 ~~~~la----~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 233 (252)
T PRK08220 158 LAKCVG----LELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDL 233 (252)
T ss_pred HHHHHH----HHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcch
Confidence 999999 66544 499999999999987543211100 00111 1123569999999999999875
Q ss_pred C
Q psy818 208 P 208 (214)
Q Consensus 208 ~ 208 (214)
.
T Consensus 234 ~ 234 (252)
T PRK08220 234 A 234 (252)
T ss_pred h
Confidence 4
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.3e-11 Score=97.18 Aligned_cols=125 Identities=15% Similarity=0.123 Sum_probs=87.3
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|.. ..++.+.+.++|+..+++| .+++.+++.|++.+ +++||.++. .|+++|+++.+
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 155 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEG 155 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHH
Confidence 4466654422 1235566678899999999 45789999997654 788887653 69999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccC--------Cchhh-------HhHH---hhCCCCChHhHHHHHH
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL--------GDKFD-------KSLY---EAHPCLQAEDIANTVE 201 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~--------~~~~~-------~~~~---~~~~~~~pedvA~~v~ 201 (214)
++++++ .++.+. +|+.|+||.++|++..... ..... .... ......+|+|||++++
T Consensus 156 ~~~~l~----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~ 231 (273)
T PRK06182 156 FSDALR----LEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAIS 231 (273)
T ss_pred HHHHHH----HHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHH
Confidence 999999 565543 9999999999998653110 00000 0111 1123569999999999
Q ss_pred HHhcCC
Q psy818 202 FILSSP 207 (214)
Q Consensus 202 fl~s~p 207 (214)
++++..
T Consensus 232 ~~~~~~ 237 (273)
T PRK06182 232 KAVTAR 237 (273)
T ss_pred HHHhCC
Confidence 999863
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.7e-11 Score=96.40 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=88.5
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|..- .++.+.+.++|+..+++| .+++++++.|...+ ++++|.++. .|+++|+++.+
T Consensus 90 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 169 (256)
T PRK06124 90 DILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTG 169 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHHH
Confidence 34566554321 235556667899999988 56788888886543 778887754 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHh-h---CCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYE-A---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~-~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++.++ .++.+ .+||+|+||.++|++............... . ....+|||+|++++||++.+..
T Consensus 170 ~~~~la----~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~ 239 (256)
T PRK06124 170 LMRALA----AEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAAS 239 (256)
T ss_pred HHHHHH----HHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence 999998 66654 399999999999987543221111111111 1 2256899999999999997643
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.3e-11 Score=96.38 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=86.5
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|..+. ++.+.+.++|+..+++| .+++++.+.|.+++ ++++|.++. .|+++|+|+.++
T Consensus 88 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l 167 (264)
T PRK07576 88 DVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDML 167 (264)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHHHHHH
Confidence 445665443332 34555667888888888 66888888887553 778887653 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchh-hhhccccCCchhhHh-HHh---hCCCCChHhHHHHHHHHhcCCCc
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVK-SQIFKSSLGDKFDKS-LYE---AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~-t~~~~~~~~~~~~~~-~~~---~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++++ .++.+. +|++|+||.++ |+............. ... .....+|+|||+.++||++.+.+
T Consensus 168 ~~~la----~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 237 (264)
T PRK07576 168 TRTLA----LEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMAS 237 (264)
T ss_pred HHHHH----HHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhc
Confidence 99999 666543 99999999986 553322222111111 111 12245899999999999987543
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.1e-11 Score=95.94 Aligned_cols=126 Identities=17% Similarity=0.187 Sum_probs=88.5
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|.+++ ++++|.++. .|+++|+++.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 158 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVR 158 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHH
Confidence 55677655432 235566677888999998 45678888886643 677887643 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCch---------h-hHhHHh---hCCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDK---------F-DKSLYE---AHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~---------~-~~~~~~---~~~~~~pedvA~~v~fl~s 205 (214)
++++.++ .++.+ .+|+.++||.++|++........ . ...... .....+|||+|+++.||++
T Consensus 159 ~~~~~l~----~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~ 234 (254)
T TIGR02415 159 GLTQTAA----QELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLAS 234 (254)
T ss_pred HHHHHHH----HHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcc
Confidence 9999998 66654 38999999999998764321110 0 011111 1235699999999999999
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
.+.
T Consensus 235 ~~~ 237 (254)
T TIGR02415 235 EDS 237 (254)
T ss_pred ccc
Confidence 875
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.8e-11 Score=97.13 Aligned_cols=123 Identities=15% Similarity=0.147 Sum_probs=88.1
Q ss_pred CCceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcC---------cHHHHHHHH
Q psy818 78 PNGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEM---------SDYERRQLA 138 (214)
Q Consensus 78 ~~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~---------~~Y~a~K~a 138 (214)
.+.++|+-|.. +.++.+.+.++|+.++++| .+++++++.|++++ ++++|..+ ..|+++|+|
T Consensus 91 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a 170 (273)
T PRK08278 91 IDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYG 170 (273)
T ss_pred CCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchhHHHHHH
Confidence 35567755432 3345566667899999988 67889999987653 56776542 289999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCcc-chhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPG-LVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg-~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+.+++++++ .++.+. +||+|+|| .++|++........ .......+|+|||++++||++.++.
T Consensus 171 ~~~~~~~la----~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~-----~~~~~~~~p~~va~~~~~l~~~~~~ 235 (273)
T PRK08278 171 MSLCTLGLA----EEFRDDGIAVNALWPRTTIATAAVRNLLGGD-----EAMRRSRTPEIMADAAYEILSRPAR 235 (273)
T ss_pred HHHHHHHHH----HHhhhcCcEEEEEeCCCccccHHHHhccccc-----ccccccCCHHHHHHHHHHHhcCccc
Confidence 999999999 677653 99999999 68887654321111 0112357999999999999997653
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.8e-11 Score=95.58 Aligned_cols=129 Identities=14% Similarity=0.156 Sum_probs=90.5
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.... .+.+.+.++|+..+++| .+++++++.|.+. + ++++|..+. .|+++|+|+.
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 159 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR 159 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence 556776553322 34566778899999999 5688899988653 3 678887653 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccC------CchhhHhHHh--hCCCCChHhHHHHHHHHhcCCCcc
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSL------GDKFDKSLYE--AHPCLQAEDIANTVEFILSSPPHV 210 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~------~~~~~~~~~~--~~~~~~pedvA~~v~fl~s~p~~~ 210 (214)
++.+.++ .++.+ .+|++|+||.++|++..... ..+....... ....++|||||++++++++.++..
T Consensus 160 ~~~~~l~----~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~~~ 235 (272)
T PRK07832 160 GLSEVLR----FDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKNRYL 235 (272)
T ss_pred HHHHHHH----HHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcCCeE
Confidence 9999999 55544 39999999999998765321 0111111111 123579999999999999876554
Q ss_pred c
Q psy818 211 Q 211 (214)
Q Consensus 211 ~ 211 (214)
+
T Consensus 236 ~ 236 (272)
T PRK07832 236 V 236 (272)
T ss_pred E
Confidence 3
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.6e-11 Score=96.58 Aligned_cols=126 Identities=17% Similarity=0.226 Sum_probs=88.0
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|.. ...+.+.+.++|+.++++| .+++.+++.|.+.+ +++||.++. .|+++|+|+.+
T Consensus 78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 157 (277)
T PRK05993 78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEG 157 (277)
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHH
Confidence 3456643321 2235566667899999999 45788999998764 788998764 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCc---------hhh--------HhHH---hhC-CCCChHhHHH
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD---------KFD--------KSLY---EAH-PCLQAEDIAN 198 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~---------~~~--------~~~~---~~~-~~~~pedvA~ 198 (214)
++++++ .++.+. +|++|+||.++|++....... ... .... ... ..++||+||+
T Consensus 158 ~~~~l~----~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 233 (277)
T PRK05993 158 LSLTLR----MELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYA 233 (277)
T ss_pred HHHHHH----HHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHH
Confidence 999999 666543 999999999999876532100 000 0000 011 1368999999
Q ss_pred HHHHHhcCCC
Q psy818 199 TVEFILSSPP 208 (214)
Q Consensus 199 ~v~fl~s~p~ 208 (214)
.++..+..++
T Consensus 234 ~i~~a~~~~~ 243 (277)
T PRK05993 234 VLLHALTAPR 243 (277)
T ss_pred HHHHHHcCCC
Confidence 9999987653
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.5e-11 Score=95.89 Aligned_cols=120 Identities=15% Similarity=0.094 Sum_probs=89.5
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ...+.+.+.+.|..++++| .+++.+++.|.+++ +++||.++. .|+++|+++.+
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 159 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVG 159 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHH
Confidence 4456654422 2235566667899999999 56889999998765 788998765 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .++.+ .+|++|+||.++|++...... ....+..+|+|+|++++++++.+..
T Consensus 160 ~~~~l~----~el~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 160 FTDAAR----LELRGTGVHVSVVLPSFVNTELIAGTGG-------AKGFKNVEPEDVAAAIVGTVAKPRP 218 (273)
T ss_pred HHHHHH----HHhhccCcEEEEEeCCcCcchhhccccc-------ccCCCCCCHHHHHHHHHHHHhCCCC
Confidence 999999 55544 389999999999987643210 1122457999999999999987654
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.9e-11 Score=95.22 Aligned_cols=126 Identities=13% Similarity=0.249 Sum_probs=88.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|..- .++.+.+.++|+.++++| .+++++.+.|.+.+ ++++|.++. .|+++|+++.+
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~ 162 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG 162 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHH
Confidence 55677654321 234455667899999998 55788889887654 778887654 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHh---hCCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYE---AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++.++ .++.+ .++|+|+||.+.|++..... ......... .....+|||+|+++.||+|.++.
T Consensus 163 ~~~~l~----~~~~~~gi~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~ 230 (246)
T PRK12938 163 FTMSLA----QEVATKGVTVNTVSPGYIGTDMVKAIR-PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESG 230 (246)
T ss_pred HHHHHH----HHhhhhCeEEEEEEecccCCchhhhcC-hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccC
Confidence 999998 55544 38999999999998765321 111111111 12246999999999999987643
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.8e-11 Score=95.28 Aligned_cols=124 Identities=14% Similarity=0.182 Sum_probs=84.4
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCC-CCCcCc------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTL-GSIEMS------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i-~S~a~~------~Y~a~K~a~~~~~ 143 (214)
+.++|+.|.. ..++.+.+.++|..++++| .+++++.+.|.+.+ +++ +|..+. .|+++|+|+.+++
T Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~a~~~~~ 170 (257)
T PRK12744 91 DIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAPVEHFT 170 (257)
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHHHHHHHH
Confidence 4466654421 1234555667899999999 56788899887665 333 554332 7999999999999
Q ss_pred hhccCcchhhhCc--ccccccCccchhhhhccccCCchhh---HhHHhh-----CCCCChHhHHHHHHHHhcC
Q psy818 144 FNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFD---KSLYEA-----HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 144 ~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~---~~~~~~-----~~~~~pedvA~~v~fl~s~ 206 (214)
++++ .++.+ .+||.++||.+.|++.......... ...... ....+|+|||+++.||++.
T Consensus 171 ~~la----~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 239 (257)
T PRK12744 171 RAAS----KEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD 239 (257)
T ss_pred HHHH----HHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc
Confidence 9999 67665 3999999999999875432111100 000000 1356899999999999995
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.7e-10 Score=94.25 Aligned_cols=126 Identities=11% Similarity=0.052 Sum_probs=89.5
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.... ++.+.+.++|+..+++| .+++.+++.|++.+ +++||.++. .|+++|+++.+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~ 158 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEG 158 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHH
Confidence 557776554322 35566667899999999 46788888887643 778887654 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCC----c---hhh----HhHHhhCCC-CChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG----D---KFD----KSLYEAHPC-LQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~----~---~~~----~~~~~~~~~-~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+|+.++||.+.|++...... . ... ......... ++|+|+|++++++++.+
T Consensus 159 ~~~~la----~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~ 234 (275)
T PRK08263 159 MSEALA----QEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE 234 (275)
T ss_pred HHHHHH----HHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC
Confidence 999998 55544 399999999999987642110 0 000 111122335 89999999999999875
Q ss_pred C
Q psy818 208 P 208 (214)
Q Consensus 208 ~ 208 (214)
.
T Consensus 235 ~ 235 (275)
T PRK08263 235 N 235 (275)
T ss_pred C
Confidence 3
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.1e-11 Score=94.25 Aligned_cols=128 Identities=14% Similarity=0.218 Sum_probs=89.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHHH-----HHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVST-----ILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn~-----~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|..- ..+.+.+.++|..++++|. +++.+++.|.+.+ +++||.++. .|+++|+++.+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 55677644322 2345556678888999983 6889999998753 778887754 89999999999
Q ss_pred HHhhccCcchhhhCc----ccccccCccchhhhhccccC---Cch-hhHhHHhh---CCCCChHhHHHHHHHHhcCCCcc
Q psy818 142 LRFNLNDKNFCELFP----DLVQSISPGLVKSQIFKSSL---GDK-FDKSLYEA---HPCLQAEDIANTVEFILSSPPHV 210 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~----~~vn~v~pg~~~t~~~~~~~---~~~-~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~~ 210 (214)
++++++ .++.+ .+|++|+||.++|++..... ... ........ ..+.+|||||++++||++.+...
T Consensus 161 ~~~~la----~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 236 (251)
T PRK07069 161 LTKSIA----LDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRF 236 (251)
T ss_pred HHHHHH----HHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccC
Confidence 999998 55432 48999999999998764321 111 11111111 23568999999999999876543
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1e-10 Score=93.87 Aligned_cols=127 Identities=20% Similarity=0.280 Sum_probs=87.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
++++|+.|... .++.+.+.++|...+++| .+++++.+.|...+ ++++|.++. .|+++|+++.+++
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~ 161 (249)
T PRK06500 82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLA 161 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHH
Confidence 45677654322 234455667888899988 66888898886655 666775542 8999999999999
Q ss_pred hhccCcchhhhCc--ccccccCccchhhhhccccC-Cc---hhh-HhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 144 FNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSL-GD---KFD-KSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 144 ~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~-~~---~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++ .++.+ .+|++++||.++|++..... .. ... ...... ....+|+|+|++++||++.+..
T Consensus 162 ~~la----~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 233 (249)
T PRK06500 162 KTLS----GELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESA 233 (249)
T ss_pred HHHH----HHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 9998 56543 38999999999998764321 11 111 111111 1245999999999999986553
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.8e-11 Score=94.61 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=89.2
Q ss_pred CCceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 78 PNGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 78 ~~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
.++++|+-|..- .++.+.+.++|+..+++| .+++.+++.|.+++ ++++|.++. .|+++|+++.
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~ 163 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA 163 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence 355666544221 123445556788888888 56788889887653 778887643 8999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcccc
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i 212 (214)
++++.++ .++.+ .++++|.||.++|++...... .........++|||+|++++||++.|....+
T Consensus 164 ~~~~~~a----~e~~~~gi~v~~i~pg~i~t~~~~~~~~----~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 229 (241)
T PRK07454 164 AFTKCLA----EEERSHGIRVCTITLGAVNTPLWDTETV----QADFDRSAMLSPEQVAQTILHLAQLPPSAVI 229 (241)
T ss_pred HHHHHHH----HHhhhhCCEEEEEecCcccCCccccccc----ccccccccCCCHHHHHHHHHHHHcCCcccee
Confidence 9999998 55544 399999999999987542110 1111123457999999999999999876544
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1e-10 Score=95.83 Aligned_cols=126 Identities=16% Similarity=0.140 Sum_probs=88.7
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ...+.+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.
T Consensus 85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 164 (275)
T PRK05876 85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVV 164 (275)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHH
Confidence 4466754432 2346667778899999999 6688999999765 2 788998765 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCC---chh-h-------HhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG---DKF-D-------KSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~---~~~-~-------~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++++++ .++.+ .+|++|+||.++|++...... ... . .........++|+|||++++-.+...
T Consensus 165 ~~~~~l~----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~ 240 (275)
T PRK05876 165 GLAETLA----REVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 (275)
T ss_pred HHHHHHH----HHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC
Confidence 9999999 56544 399999999999987543110 000 0 00001112579999999999887665
Q ss_pred C
Q psy818 208 P 208 (214)
Q Consensus 208 ~ 208 (214)
+
T Consensus 241 ~ 241 (275)
T PRK05876 241 R 241 (275)
T ss_pred C
Confidence 4
|
|
| >KOG0429|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=1e-09 Score=84.05 Aligned_cols=106 Identities=20% Similarity=0.347 Sum_probs=84.3
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCC--CCCeEEEEcCCceecCC--
Q psy818 10 ARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPF--KPPSIYMITPNGRFKTN-- 85 (214)
Q Consensus 10 ~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~--~pP~v~f~t~~~~~h~n-- 85 (214)
-.|..|+....+.+..||++.|.-.|-+.|..+|.+.+ +.|.||+|+|.|.+|++||. .-|+|.|.+. +|||-
T Consensus 22 y~llAEf~lV~~ekL~gIyviPSyan~l~WFGViFvr~-GiyaggVFRFtIliPdnfPdd~dlPrvvF~q~--vfHP~ic 98 (258)
T KOG0429|consen 22 YALLAEFVLVCREKLDGIYVIPSYANKLLWFGVIFVRK-GIYAGGVFRFTILIPDNFPDDSDLPRVVFEQS--VFHPLIC 98 (258)
T ss_pred HHHHHHHHHHHhccCCceEEcccccccceEEEEEEEec-ccccCceEEEEEEcCccCCCcCCCCeEEeecc--ccccccC
Confidence 36778889999999999999999999999999999754 67999999999999999995 5899999998 89982
Q ss_pred ---CceeeecCCCCCCCCcCccc-HHHHHHHHHHhhccCC
Q psy818 86 ---TRLCLSMSDFHPDTWNPAWS-VSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ---g~ic~~~l~~~~e~w~~~~~-vn~~l~a~~~~m~~~~ 121 (214)
+..|+.- ...+|+.--+ +.++++.++..+.+..
T Consensus 99 p~skeLdl~r---af~eWRk~ehhiwqvL~ylqriF~dpd 135 (258)
T KOG0429|consen 99 PKSKELDLNR---AFPEWRKEEHHIWQVLVYLQRIFYDPD 135 (258)
T ss_pred CCccceeHhh---hhhhhhccccHHHHHHHHHHHHhcCcc
Confidence 3444331 1134875543 4477888888887765
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-10 Score=92.10 Aligned_cols=123 Identities=20% Similarity=0.186 Sum_probs=82.5
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
++++|+.|.. ..++.+.+.++|..++++| .+++ .+.|...+ ++++|.++. .|+++|+++.+++
T Consensus 71 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~ 148 (230)
T PRK07041 71 DHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALA 148 (230)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHH
Confidence 4456654321 1234455567888899988 2333 34454444 778887764 7999999999999
Q ss_pred hhccCcchhhhCcccccccCccchhhhhccccCCc---hhhHhHHh---hCCCCChHhHHHHHHHHhcCC
Q psy818 144 FNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD---KFDKSLYE---AHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 144 ~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~---~~~~~~~~---~~~~~~pedvA~~v~fl~s~p 207 (214)
+.++ .++.+.||++++||.++|++....... ........ .....+|||||++++||++.+
T Consensus 149 ~~la----~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 214 (230)
T PRK07041 149 RGLA----LELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANG 214 (230)
T ss_pred HHHH----HHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence 9999 777778999999999999876432111 11111111 122458999999999999864
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-10 Score=93.74 Aligned_cols=126 Identities=17% Similarity=0.166 Sum_probs=85.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|..|... ..+.+.+.++|+..+++| .+++++.+.|.+++ ++++|.++. .|+++|+|+.
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~ 162 (259)
T PRK12384 83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGV 162 (259)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHHH
Confidence 45677654322 235566667888888888 46888999886543 677776643 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccch-hhhhccccCC---------chhhHhH-Hhh---CCCCChHhHHHHHHHHh
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLV-KSQIFKSSLG---------DKFDKSL-YEA---HPCLQAEDIANTVEFIL 204 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~-~t~~~~~~~~---------~~~~~~~-~~~---~~~~~pedvA~~v~fl~ 204 (214)
+++++++ .++.+. +||+|+||.+ .+++...... .+..... ... ...++|+||+++++||+
T Consensus 163 ~l~~~la----~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~ 238 (259)
T PRK12384 163 GLTQSLA----LDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYA 238 (259)
T ss_pred HHHHHHH----HHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHc
Confidence 9999999 665444 9999999964 6665432111 1111111 111 23569999999999999
Q ss_pred cCCC
Q psy818 205 SSPP 208 (214)
Q Consensus 205 s~p~ 208 (214)
+...
T Consensus 239 ~~~~ 242 (259)
T PRK12384 239 SPKA 242 (259)
T ss_pred Cccc
Confidence 8754
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.3e-10 Score=92.94 Aligned_cols=118 Identities=11% Similarity=0.070 Sum_probs=85.2
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|...+++| .+++++++.|.+.+ ++++|..+. .|+++|+|+.
T Consensus 89 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~ 168 (239)
T PRK08703 89 DGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALN 168 (239)
T ss_pred CEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHHHHH
Confidence 4566754421 2245556667888899998 46888899887643 677776654 6999999999
Q ss_pred HHHhhccCcchhhhC---cccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 141 SLRFNLNDKNFCELF---PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~---~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
++++.++ .++. ..+|++|.||.++|++.......... ....+++|||..++|+++.
T Consensus 169 ~~~~~la----~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 169 YLCKVAA----DEWERFGNLRANVLVPGPINSPQRIKSHPGEAK------SERKSYGDVLPAFVWWASA 227 (239)
T ss_pred HHHHHHH----HHhccCCCeEEEEEecCcccCccccccCCCCCc------cccCCHHHHHHHHHHHhCc
Confidence 9999999 5554 24999999999999875432111111 1236999999999999984
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.8e-10 Score=92.50 Aligned_cols=128 Identities=18% Similarity=0.152 Sum_probs=88.9
Q ss_pred CCceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 78 PNGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 78 ~~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
.++++|..|.. ..++.+.+.+.|...+++| .+++++++.|.+++ ++++|..+. .|+++|+++.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~ 162 (250)
T PRK08063 83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALE 162 (250)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHH
Confidence 35567755432 2345566667788888888 66888999987643 777886543 8999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhH-hHHh---hCCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDK-SLYE---AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~-~~~~---~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++++++ .++.+ .++|+|+||.+.|++........... .... ....++++|+|++++|+++.+.+
T Consensus 163 ~~~~~~~----~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~ 233 (250)
T PRK08063 163 ALTRYLA----VELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEAD 233 (250)
T ss_pred HHHHHHH----HHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 9999998 66644 39999999999998764321111111 1111 12357999999999999987643
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.5e-10 Score=93.48 Aligned_cols=125 Identities=16% Similarity=0.153 Sum_probs=84.1
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|..-. .+.+.. ++|+..+++| .+++.+.+.|.+.. ++++|.++. .|+++|+++.++
T Consensus 85 d~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 163 (258)
T PRK08628 85 DGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLAL 163 (258)
T ss_pred CEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHHH
Confidence 456676543211 122223 6788888888 45677788776543 677877643 899999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccC---Cchh--hHhHHhh----CCCCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSL---GDKF--DKSLYEA----HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~---~~~~--~~~~~~~----~~~~~pedvA~~v~fl~s~p~ 208 (214)
++.++ .++.+ .+||+|.||.+.|++..... .... ....... ....+|+|||++++||++...
T Consensus 164 ~~~l~----~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 236 (258)
T PRK08628 164 TREWA----VALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERS 236 (258)
T ss_pred HHHHH----HHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhh
Confidence 99998 66654 39999999999998754311 1111 1111111 135699999999999998753
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.5e-10 Score=93.19 Aligned_cols=128 Identities=21% Similarity=0.238 Sum_probs=89.4
Q ss_pred CCceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHH
Q psy818 78 PNGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 78 ~~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
.++++|+.|.. ..++.+.+.++|..++++| .+++++.+.|.+.+ ++++|.++. .|+++|+++
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 166 (276)
T PRK05875 87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAV 166 (276)
T ss_pred CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHHH
Confidence 35577765532 1234455667788888888 56777888886543 778887653 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.++.+.++ .++.+. +++.|+||.++|++.......... ...... ...++|+|||++++||++.+..
T Consensus 167 ~~~~~~~~----~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 238 (276)
T PRK05875 167 DHLMKLAA----DELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAAS 238 (276)
T ss_pred HHHHHHHH----HHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 99999998 666543 899999999999876533222111 111111 1245899999999999998754
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=5.4e-10 Score=93.25 Aligned_cols=126 Identities=12% Similarity=0.074 Sum_probs=86.0
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcC-------------------c
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEM-------------------S 130 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~-------------------~ 130 (214)
+.++|+.| +.....+.+.++|+..+++| .+++.+++.|.+.+ ++++|.++ .
T Consensus 101 D~li~nAg-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
T PRK06196 101 DILINNAG-VMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWL 179 (315)
T ss_pred CEEEECCC-CCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence 44556443 33222344567899999999 56888999887653 77887643 1
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhh-HhHHh-----h-CCCCChHhHHHHHH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFD-KSLYE-----A-HPCLQAEDIANTVE 201 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~-----~-~~~~~pedvA~~v~ 201 (214)
.|+++|+|+..+++.++ .++.+ .+|++|+||.+.|++.......... ..... . ....+|||+|++++
T Consensus 180 ~Y~~SK~a~~~~~~~la----~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 255 (315)
T PRK06196 180 AYGQSKTANALFAVHLD----KLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQV 255 (315)
T ss_pred HHHHHHHHHHHHHHHHH----HHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHH
Confidence 69999999999999998 55543 4999999999999976432211110 00000 0 12468999999999
Q ss_pred HHhcCCCc
Q psy818 202 FILSSPPH 209 (214)
Q Consensus 202 fl~s~p~~ 209 (214)
||++.|..
T Consensus 256 ~l~~~~~~ 263 (315)
T PRK06196 256 WAATSPQL 263 (315)
T ss_pred HHhcCCcc
Confidence 99987643
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.9e-10 Score=100.50 Aligned_cols=126 Identities=14% Similarity=0.180 Sum_probs=85.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhh--ccCC--CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFM--VERS--PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m--~~~~--v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|..- ..+.+.+.+.|+.++++| .+++++.+.+ ...+ +++||.++. .|+++|+++.+
T Consensus 286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~ 365 (450)
T PRK08261 286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIG 365 (450)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHH
Confidence 45666544221 124556678899999999 5677777743 3334 788887653 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCc-hhh-HhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD-KFD-KSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~-~~~-~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+ .++|+|+||.++|++....... ... ..........+|+|||++++||+|...
T Consensus 366 ~~~~la----~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~ 432 (450)
T PRK08261 366 LVQALA----PLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPAS 432 (450)
T ss_pred HHHHHH----HHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhh
Confidence 999998 55544 4999999999999876532111 111 111111224589999999999998543
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.6e-10 Score=91.91 Aligned_cols=125 Identities=13% Similarity=0.079 Sum_probs=87.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++.+ +++||.++. .|+++|+++.+
T Consensus 80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~ 159 (277)
T PRK06180 80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEG 159 (277)
T ss_pred CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHH
Confidence 55777655432 235555667888999999 56888899887654 788887654 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCC------chh---hHh------HHhhCCCCChHhHHHHHHHHh
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG------DKF---DKS------LYEAHPCLQAEDIANTVEFIL 204 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~------~~~---~~~------~~~~~~~~~pedvA~~v~fl~ 204 (214)
++++++ .++.+ .+|++|+||.+.|++...... ... ... ......+.+|+|+|+++++++
T Consensus 160 ~~~~la----~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l 235 (277)
T PRK06180 160 ISESLA----KEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAV 235 (277)
T ss_pred HHHHHH----HHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence 999998 56543 499999999999876432110 000 000 011123569999999999999
Q ss_pred cCC
Q psy818 205 SSP 207 (214)
Q Consensus 205 s~p 207 (214)
+.+
T Consensus 236 ~~~ 238 (277)
T PRK06180 236 ESD 238 (277)
T ss_pred cCC
Confidence 865
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.9e-10 Score=90.50 Aligned_cols=125 Identities=16% Similarity=0.214 Sum_probs=86.3
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-----C--CCCCCCcCc--------HHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-----S--PTLGSIEMS--------DYERRQ 136 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-----~--v~i~S~a~~--------~Y~a~K 136 (214)
++++|+.|... ..+.+.+.++|..++++| .+++++++.|.++ + ++++|.++. .|+++|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK 161 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence 45677654322 235555667888999999 4578888888643 2 678887542 599999
Q ss_pred HHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCC---CCChHhHHHHHHHHhcCC
Q psy818 137 LAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p 207 (214)
+++.++++.++ .++.+ .+|++|+||.+.|++.................+ ..+|||+|++++||++..
T Consensus 162 aa~~~~~~~la----~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~ 233 (248)
T PRK06123 162 GAIDTMTIGLA----KEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDE 233 (248)
T ss_pred HHHHHHHHHHH----HHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999999998 66654 399999999999987543211111111111122 358999999999999864
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.1e-10 Score=91.15 Aligned_cols=127 Identities=18% Similarity=0.246 Sum_probs=85.2
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-----C--CCCCCCcCc--------HHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-----S--PTLGSIEMS--------DYERRQ 136 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-----~--v~i~S~a~~--------~Y~a~K 136 (214)
++++|+.|.. ..++.+.+.++|..++++| .+++++++.|..+ + ++++|.++. .|+++|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK 161 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence 4566754422 1234455667788888888 4456777777543 2 677776532 699999
Q ss_pred HHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 137 LAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++.++++.++ .++.+ .+|+++.||.++|++................ ....+|||+|+.++|+++.+..
T Consensus 162 ~~~~~~~~~la----~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~ 235 (248)
T PRK06947 162 GAVDTLTLGLA----KELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAAS 235 (248)
T ss_pred HHHHHHHHHHH----HHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 99999999998 56554 3999999999999975421111111111111 1246899999999999998753
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.5e-10 Score=90.91 Aligned_cols=127 Identities=13% Similarity=0.026 Sum_probs=89.4
Q ss_pred CCceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 78 PNGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 78 ~~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
.++++|+.|... ..+.+.+.++|+.++++| .+++++++.|++.+ ++++|.++. .|+++|+++.
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 153 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE 153 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence 355677655332 234555667899999998 56889999997764 788888754 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCch-h----h---H---hHHh--hCCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDK-F----D---K---SLYE--AHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~-~----~---~---~~~~--~~~~~~pedvA~~v~fl~s 205 (214)
++++.++ .++.+ .+|++|+||.+.|++........ . . . .... .....+|+++|+.++++++
T Consensus 154 ~~~~~l~----~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~ 229 (270)
T PRK06179 154 GYSESLD----HEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAAL 229 (270)
T ss_pred HHHHHHH----HHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHc
Confidence 9999999 55543 38999999999998765322110 0 0 0 0000 1124589999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
.+.
T Consensus 230 ~~~ 232 (270)
T PRK06179 230 GPW 232 (270)
T ss_pred CCC
Confidence 763
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-10 Score=91.68 Aligned_cols=121 Identities=17% Similarity=0.233 Sum_probs=86.4
Q ss_pred CceecCCCc--eeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTR--LCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~--ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|. .+.++.+.+.+.|...+++| .+++++.+.|.+.+ ++++|.++. .|+++|+++.
T Consensus 94 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 173 (247)
T PRK08945 94 DGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATE 173 (247)
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHHHHH
Confidence 456675442 22345556667899889998 46888888887654 677776643 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++.+.++ .++.+ .++++++||.+.|++........ ......+|||||++++|+++.+++
T Consensus 174 ~~~~~~~----~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (247)
T PRK08945 174 GMMQVLA----DEYQGTNLRVNCINPGGTRTAMRASAFPGE------DPQKLKTPEDIMPLYLYLMGDDSR 234 (247)
T ss_pred HHHHHHH----HHhcccCEEEEEEecCCccCcchhhhcCcc------cccCCCCHHHHHHHHHHHhCcccc
Confidence 9999998 44443 38999999999887643221111 112357999999999999987654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-10 Score=93.05 Aligned_cols=112 Identities=19% Similarity=0.195 Sum_probs=79.1
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-----------------HHHHHHHHHHHHHh
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-----------------DYERRQLAARSLRF 144 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-----------------~Y~a~K~a~~~~~~ 144 (214)
.+.+.+.+.|...+++| .+++++++.|.+++ +++||.++. .|+++|+|+.++++
T Consensus 101 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~ 180 (256)
T PRK09186 101 KFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTK 180 (256)
T ss_pred ccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHH
Confidence 34556667788888888 56889999997654 778886542 49999999999999
Q ss_pred hccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 145 NLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 145 ~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
.++ .++.+. +||.++||.+.++..... .............++|||||++++|+++...
T Consensus 181 ~la----~e~~~~~i~v~~i~Pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 240 (256)
T PRK09186 181 YLA----KYFKDSNIRVNCVSPGGILDNQPEAF--LNAYKKCCNGKGMLDPDDICGTLVFLLSDQS 240 (256)
T ss_pred HHH----HHhCcCCeEEEEEecccccCCCCHHH--HHHHHhcCCccCCCCHHHhhhhHhheecccc
Confidence 999 666543 899999998765431110 0000111112235799999999999998654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.6e-10 Score=89.94 Aligned_cols=125 Identities=17% Similarity=0.153 Sum_probs=86.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|..- ..+.+.+.++|+.++++| .+++++.+.|...+ ++++|.++. .|+++|+++.+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 158 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRG 158 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence 44667544321 224455567788899998 56788888887653 678887643 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
++++++ .++.+ .+|++|.||.++|++...................++|+|+|+++++++..+
T Consensus 159 ~~~~l~----~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 159 LTEALD----LEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHH----HHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhCC
Confidence 999998 55554 399999999999987653111111111111222468999999999999655
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.4e-10 Score=91.04 Aligned_cols=127 Identities=14% Similarity=0.160 Sum_probs=90.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... ..+.+.+.++|+.++++| .+++.+++.|.+.+ ++++|.++. .|+++|+++.+
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~ 158 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVA 158 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence 45677544322 235555667899899988 56788899887654 678888754 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCc-hhhHh---HHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD-KFDKS---LYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~-~~~~~---~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .++.+. +|++|+||.++|++....... ..... ......+++|+|+|+.++..+.....
T Consensus 159 ~~~~l~----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~~~ 228 (270)
T PRK05650 159 LSETLL----VELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKGEF 228 (270)
T ss_pred HHHHHH----HHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCCE
Confidence 999999 666543 899999999999876543211 11111 11123357999999999999987654
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.2e-10 Score=90.32 Aligned_cols=124 Identities=15% Similarity=0.260 Sum_probs=85.7
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.... .+.+.+.+.|...+++| .+++++++.|.+.+ +++||.++. .|+++|+|+.+
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 165 (247)
T PRK12935 86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLG 165 (247)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHH
Confidence 457776554332 23344556788888888 56788888886542 788887653 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHH---hhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLY---EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~---~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+++.+.||.++|++..... ........ .....+.|||+|++++|+++..
T Consensus 166 ~~~~l~----~~~~~~~i~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~~ 231 (247)
T PRK12935 166 FTKSLA----LELAKTNVTVNAICPGFIDTEMVAEVP-EEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDG 231 (247)
T ss_pred HHHHHH----HHHHHcCcEEEEEEeCCCcChhhhhcc-HHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999998 55544 38999999999988754321 11111111 1123579999999999999753
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.4e-10 Score=90.96 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=83.2
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.+.|+..+++| .+++++.+.|...+ ++++|..+. .|+++|+|+.+
T Consensus 89 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~ 168 (258)
T PRK09134 89 TLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWT 168 (258)
T ss_pred CEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHHH
Confidence 5567765422 2335556667888888888 56788888886542 566665332 79999999999
Q ss_pred HHhhccCcchhhhCc-ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP-DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~-~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+|++++||.+.|..... .......... ....+|+|+|++++|+++.+
T Consensus 169 ~~~~la----~~~~~~i~v~~i~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 231 (258)
T PRK09134 169 ATRTLA----QALAPRIRVNAIGPGPTLPSGRQS---PEDFARQHAATPLGRGSTPEEIAAAVRYLLDAP 231 (258)
T ss_pred HHHHHH----HHhcCCcEEEEeecccccCCcccC---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence 999998 66655 499999999987753211 1111111111 12458999999999999865
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.4e-10 Score=88.89 Aligned_cols=126 Identities=15% Similarity=0.226 Sum_probs=86.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|...+++| .+++++++.|++.+ ++++|.+.. .|+++|+++.++
T Consensus 70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~Y~~sK~a~~~~ 149 (234)
T PRK07577 70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDRTSYSAAKSALVGC 149 (234)
T ss_pred cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCchHHHHHHHHHHHH
Confidence 44666554321 224444567788888888 56788889887653 677776532 899999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccCC--chhhHhHHhhCC---CCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG--DKFDKSLYEAHP---CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~--~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p~ 208 (214)
++.++ .++.+ .+|++|+||.+.|++...... ...........+ ..+|||+|+++++|++.+.
T Consensus 150 ~~~~a----~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 218 (234)
T PRK07577 150 TRTWA----LELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDA 218 (234)
T ss_pred HHHHH----HHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999 55544 399999999999987643211 111111111122 3489999999999998763
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.3e-10 Score=90.48 Aligned_cols=112 Identities=12% Similarity=0.135 Sum_probs=81.1
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
+.+.+.++|...+++| .+++.+++.|.+. + ++++|.++. .|+++|+|+.++++.++ .++
T Consensus 97 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la----~e~ 172 (251)
T PRK06924 97 IEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVA----TEQ 172 (251)
T ss_pred cccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHHHH----HHh
Confidence 5566677888888888 5688888988763 2 678887654 79999999999999998 444
Q ss_pred C----cccccccCccchhhhhccccC---Cch--hh---HhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 155 F----PDLVQSISPGLVKSQIFKSSL---GDK--FD---KSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 155 ~----~~~vn~v~pg~~~t~~~~~~~---~~~--~~---~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
. +.+|++|.||.++|++..... ... .. ..........+|||||++++||++.+
T Consensus 173 ~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 237 (251)
T PRK06924 173 EEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE 237 (251)
T ss_pred hhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc
Confidence 2 349999999999998754211 111 01 11112234679999999999999874
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.9e-10 Score=91.93 Aligned_cols=124 Identities=13% Similarity=0.139 Sum_probs=83.8
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|.. ..++.+.+.++|+..+++| .+++++.+.|..++ ++++|.++. .|+++|+|+.+
T Consensus 97 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (256)
T PRK12748 97 SILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEA 176 (256)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCCchHHHHHHHHHHH
Confidence 4466654421 2334455566788888888 56778888876542 778887653 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+|++++||.++|++........ ...........+|+|+|+++.||++..
T Consensus 177 ~~~~la----~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~l~~~~ 239 (256)
T PRK12748 177 FTKSLA----PELAEKGITVNAVNPGPTDTGWITEELKHH-LVPKFPQGRVGEPVDAARLIAFLVSEE 239 (256)
T ss_pred HHHHHH----HHHHHhCeEEEEEEeCcccCCCCChhHHHh-hhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999 55543 49999999999988643211000 001111122468999999999999864
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.7e-10 Score=88.80 Aligned_cols=124 Identities=16% Similarity=0.195 Sum_probs=87.3
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.... .+.+.+.++|+..+++| .+++.+++.|.+.+ ++++|..+. .|+++|+|+.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 456776665432 24455667899988888 56778888886543 778887754 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+++.++||.+.|++..... ........... ...+++|||+++.||++.+
T Consensus 162 ~~~~l~----~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 227 (245)
T PRK12824 162 FTKALA----SEGARYGITVNCIAPGYIATPMVEQMG-PEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEA 227 (245)
T ss_pred HHHHHH----HHHHHhCeEEEEEEEcccCCcchhhcC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999998 55544 38999999999988754321 11111111111 2459999999999999765
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.9e-10 Score=86.83 Aligned_cols=88 Identities=20% Similarity=0.251 Sum_probs=70.4
Q ss_pred ecCCCceeeec---CCCCCCCCcCcccHH-----HHHHHHHHhhccCC---------------CCCCCCcCc--------
Q psy818 82 FKTNTRLCLSM---SDFHPDTWNPAWSVS-----TILTGLLSFMVERS---------------PTLGSIEMS-------- 130 (214)
Q Consensus 82 ~h~ng~ic~~~---l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---------------v~i~S~a~~-------- 130 (214)
+-+|++++.+. .+.+.+.|...+++| .++|+++|++++.. +|++|.++.
T Consensus 88 LinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~ 167 (249)
T KOG1611|consen 88 LINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGG 167 (249)
T ss_pred EEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCCCcc
Confidence 34577887763 334445699999999 67899999997532 578777754
Q ss_pred --HHHHHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhcc
Q psy818 131 --DYERRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFK 173 (214)
Q Consensus 131 --~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~ 173 (214)
+|..+|+|+..|+++++ .++.++ .|.+++||+|.|+|..
T Consensus 168 ~~AYrmSKaAlN~f~ksls----~dL~~~~ilv~sihPGwV~TDMgg 210 (249)
T KOG1611|consen 168 LSAYRMSKAALNMFAKSLS----VDLKDDHILVVSIHPGWVQTDMGG 210 (249)
T ss_pred hhhhHhhHHHHHHHHHHhh----hhhcCCcEEEEEecCCeEEcCCCC
Confidence 89999999999999999 788776 6788999999999875
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=7.3e-10 Score=89.01 Aligned_cols=125 Identities=22% Similarity=0.175 Sum_probs=86.0
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
++++|+.|.. -.++.+.+.+.|+..+++| .+++++.+.|.+.+ ++++|.++. .|+++|+++.+++
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~ 165 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLT 165 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHHHHH
Confidence 5567755421 1224444555677777877 56788888887765 788888764 7999999999999
Q ss_pred hhccCcchhhhCcc-cccccCccchhhhhccccC---C--chh-hHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 144 FNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSL---G--DKF-DKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 144 ~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~---~--~~~-~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+.++ .++.+. +++.+.||.++|++..... . ... ..........++|||+|++++++++.+
T Consensus 166 ~~l~----~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~ 232 (252)
T PRK06077 166 KYLA----LELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIE 232 (252)
T ss_pred HHHH----HHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCcc
Confidence 9998 666554 8999999999998753221 1 000 111111123579999999999999755
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.8e-10 Score=88.24 Aligned_cols=125 Identities=17% Similarity=0.138 Sum_probs=87.3
Q ss_pred CceecCCCcee----eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc----HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC----LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS----DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic----~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~----~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.+.|+..+++| .+++++++.|.+.+ ++++|.++. .|+++|+|+..
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~Y~~sK~a~~~ 164 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNFYGLAKVGLNG 164 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCccccHHHHHHHHH
Confidence 55777655321 123444556788888888 56888899886642 788887654 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
++++++ .++.. .+++.++||.++|++................. ...+|+|+|++++++++.+
T Consensus 165 ~~~~l~----~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 231 (250)
T PRK07774 165 LTQQLA----RELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDE 231 (250)
T ss_pred HHHHHH----HHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence 999998 55543 38999999999998765332222222222222 2458999999999999875
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.5e-10 Score=89.43 Aligned_cols=126 Identities=17% Similarity=0.194 Sum_probs=84.8
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a 138 (214)
++++|+.|..- ..+.+.+.+.|+..+++| .+++.+++.|.+.+ ++++|..+. .|+++|+|
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaa 160 (255)
T PRK06057 81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGG 160 (255)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHH
Confidence 44666544321 123344556788888888 56788888886543 667775431 69999999
Q ss_pred HHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCc--hhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 139 ARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD--KFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~--~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.++++.++ .++.+ .+|++|+||.++|++....... ......... ....+|+|+|+++.||++...
T Consensus 161 l~~~~~~l~----~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 233 (255)
T PRK06057 161 VLAMSRELG----VQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDA 233 (255)
T ss_pred HHHHHHHHH----HHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999999998 55554 4999999999999876543221 111111111 125699999999999998653
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.1e-09 Score=88.64 Aligned_cols=126 Identities=15% Similarity=0.227 Sum_probs=85.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHh-hccCC----CCCCCCcC-----------cHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSF-MVERS----PTLGSIEM-----------SDYERRQ 136 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~-m~~~~----v~i~S~a~-----------~~Y~a~K 136 (214)
++++|+.|... .+..+.+.+.|+.++++| .+++++.+. |.+++ ++++|.++ ..|+++|
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sK 170 (259)
T PRK08213 91 DILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSK 170 (259)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHH
Confidence 45677655432 224445557788888888 567777776 55443 66777542 3799999
Q ss_pred HHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 137 LAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++.+++++++ .++.+ .++++++||.++|++....... ........ ...++|||||++++||++..+.
T Consensus 171 a~~~~~~~~~a----~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 243 (259)
T PRK08213 171 GAVINFTRALA----AEWGPHGIRVNAIAPGFFPTKMTRGTLER-LGEDLLAHTPLGRLGDDEDLKGAALLLASDASK 243 (259)
T ss_pred HHHHHHHHHHH----HHhcccCEEEEEEecCcCCCcchhhhhHH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999998 66654 3999999999999865432211 11111111 1245899999999999987643
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.3e-10 Score=89.40 Aligned_cols=126 Identities=15% Similarity=0.201 Sum_probs=85.3
Q ss_pred CCceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 78 PNGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 78 ~~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
.++++|+.|..- .++.+.+.++|+.++++| .+++++.+.|.+++ ++++|.++. .|+++|+|+.
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~ 160 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMI 160 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHH
Confidence 355677654321 224445557888888888 45778877775432 788887643 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHH---hhCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLY---EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~---~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+ .++++++||.++|++.... ......... ......+|+|+|+++.||++.+.
T Consensus 161 ~~~~~la----~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~ 228 (245)
T PRK12936 161 GFSKSLA----QEIATRNVTVNCVAPGFIESAMTGKL-NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEA 228 (245)
T ss_pred HHHHHHH----HHhhHhCeEEEEEEECcCcCchhccc-ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccc
Confidence 9999998 55543 4999999999999875432 111111111 11224589999999999998654
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.4e-10 Score=89.76 Aligned_cols=125 Identities=16% Similarity=0.205 Sum_probs=86.7
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|...+++| .+++++.+.|.+.+ ++++|.++. .|+++|+++.+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~ 163 (258)
T PRK07890 84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLA 163 (258)
T ss_pred cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHHH
Confidence 4566755432 1234455667899999988 56788888886543 778887654 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCC---------chh-hHhHHh---hCCCCChHhHHHHHHHHhcC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG---------DKF-DKSLYE---AHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~---------~~~-~~~~~~---~~~~~~pedvA~~v~fl~s~ 206 (214)
+++.++ .++.+ .+||+++||.+.|+....... ... ...... .....+|||||++++||++.
T Consensus 164 l~~~~a----~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~ 239 (258)
T PRK07890 164 ASQSLA----TELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASD 239 (258)
T ss_pred HHHHHH----HHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCH
Confidence 999999 66644 499999999998886532110 011 111111 12245899999999999986
Q ss_pred C
Q psy818 207 P 207 (214)
Q Consensus 207 p 207 (214)
.
T Consensus 240 ~ 240 (258)
T PRK07890 240 L 240 (258)
T ss_pred h
Confidence 4
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.3e-09 Score=90.80 Aligned_cols=125 Identities=14% Similarity=0.158 Sum_probs=85.4
Q ss_pred CceecCCCceee---ecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C--CCCCCCcC---------------
Q psy818 79 NGRFKTNTRLCL---SMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S--PTLGSIEM--------------- 129 (214)
Q Consensus 79 ~~~~h~ng~ic~---~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~--v~i~S~a~--------------- 129 (214)
++++|+ +++.. ++.+.+.++|+.++++| .+++.+++.|.+. + +++||.++
T Consensus 77 D~lInn-AG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 155 (308)
T PLN00015 77 DVLVCN-AAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANL 155 (308)
T ss_pred CEEEEC-CCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccch
Confidence 445554 44432 34456678899999999 5689999999653 3 77888643
Q ss_pred ---------------------------cHHHHHHHHHHHHHhhccCcchhhhC---cccccccCccch-hhhhccccCCc
Q psy818 130 ---------------------------SDYERRQLAARSLRFNLNDKNFCELF---PDLVQSISPGLV-KSQIFKSSLGD 178 (214)
Q Consensus 130 ---------------------------~~Y~a~K~a~~~~~~~l~~~~~~e~~---~~~vn~v~pg~~-~t~~~~~~~~~ 178 (214)
.+|+++|+|...+++.++ .++. +.+|++++||++ .|++.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la----~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~ 231 (308)
T PLN00015 156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFH----RRYHEETGITFASLYPGCIATTGLFREHIPL 231 (308)
T ss_pred hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHH----HhhcccCCeEEEEecCCcccCccccccccHH
Confidence 159999999888889998 5553 349999999999 78876432111
Q ss_pred hhh-H---hHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 179 KFD-K---SLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 179 ~~~-~---~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
... . .........+||+.|+.++||++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~ 265 (308)
T PLN00015 232 FRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPS 265 (308)
T ss_pred HHHHHHHHHHHHhcccccHHHhhhhhhhhccccc
Confidence 000 0 00111225799999999999998754
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.2e-09 Score=87.67 Aligned_cols=127 Identities=17% Similarity=0.174 Sum_probs=88.4
Q ss_pred CCceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHH
Q psy818 78 PNGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 78 ~~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
.++++|..|... .++.+.+.++|...+++| .+++.+++.|.+.+ +++||..+. .|+.+|+++
T Consensus 82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~ 161 (251)
T PRK07231 82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAV 161 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHH
Confidence 355667554321 234455667888888888 46888888886553 678887653 799999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCc---hhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD---KFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~---~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
..+.+.++ .++.+ .+|++++||.+.|++....... ......... ....+|||+|++++||++.+.
T Consensus 162 ~~~~~~~a----~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 234 (251)
T PRK07231 162 ITLTKALA----AELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEA 234 (251)
T ss_pred HHHHHHHH----HHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999998 56655 3999999999999876543221 111111111 224599999999999998664
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-09 Score=87.94 Aligned_cols=126 Identities=15% Similarity=0.179 Sum_probs=85.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|..|... .++.+.+.++|+..+++| .+++++.+.|.+.+ ++++|.++. .|+++|+|+.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVA 161 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHH
Confidence 44566554332 123444556788888888 55778888886643 678887653 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCC----ch-hhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG----DK-FDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~----~~-~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+ .+++.++||.+.|++...... .. ........ ....+|+|||+++.||++.+.
T Consensus 162 ~~~~la----~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 234 (250)
T TIGR03206 162 FSKTMA----REHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDA 234 (250)
T ss_pred HHHHHH----HHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCccc
Confidence 999998 55543 489999999999987543221 11 11111111 124699999999999998764
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.4e-09 Score=87.02 Aligned_cols=126 Identities=18% Similarity=0.234 Sum_probs=86.8
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.... +..+.+.++|+..+++| .+++++.+.|.++ + +++||.++. .|+++|+++.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~ 158 (245)
T PRK07060 79 DGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALD 158 (245)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHH
Confidence 556776554322 23344556788888888 5677888887654 2 678887643 8999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
.+.+.++ .++.+ .+++++.||.+.|++....+..... ...... ....+|+|+|++++||++.+.
T Consensus 159 ~~~~~~a----~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~ 228 (245)
T PRK07060 159 AITRVLC----VELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAA 228 (245)
T ss_pred HHHHHHH----HHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence 9999998 56544 4899999999999875432222111 111111 225699999999999998764
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.7e-09 Score=86.64 Aligned_cols=126 Identities=21% Similarity=0.256 Sum_probs=86.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|..- ..+.+.+.+.|...+.+| .+++++.+.|.+++ ++++|.++. .|+++|+++.+
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~ 165 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIG 165 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHH
Confidence 45667654321 234445556788888888 56788888887732 778887643 69999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+ .+|+.|.||.++|++................ ....+|+|||++++|+++.+.
T Consensus 166 ~~~~l~----~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 233 (250)
T PRK12939 166 MTRSLA----RELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAA 233 (250)
T ss_pred HHHHHH----HHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 999998 55543 3899999999999876532211111111111 224699999999999998653
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.9e-09 Score=86.35 Aligned_cols=125 Identities=14% Similarity=0.251 Sum_probs=84.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHH-HhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLL-SFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~-~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++|+.|... .++.+.+.++|...+++| .+++++. +.|.+.+ ++++|.++. .|+++|+++.
T Consensus 89 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~ 168 (249)
T PRK12827 89 DILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLI 168 (249)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHHHHHH
Confidence 45667654322 234455567788888888 5567777 5555443 778887653 8999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
.+.+.++ .++.+ .++++++||.++|++....................+++|+|++++||++..
T Consensus 169 ~~~~~l~----~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 233 (249)
T PRK12827 169 GLTKTLA----NELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDA 233 (249)
T ss_pred HHHHHHH----HHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcCcc
Confidence 9999998 55543 389999999999987643221111111111122459999999999999764
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.6e-09 Score=87.38 Aligned_cols=127 Identities=17% Similarity=0.175 Sum_probs=84.9
Q ss_pred CceecCCCceee--ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL--SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic~--~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++|+.| ++. ...+.+.+.|...+++| .+++++++.|..++ ++++|..+. .|+++|+++.
T Consensus 89 d~vi~~Ag-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 167 (274)
T PRK07775 89 EVLVSGAG-DTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLE 167 (274)
T ss_pred CEEEECCC-cCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHH
Confidence 45677544 332 24444556787777887 56777888776543 678887643 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCch---hhHhHH-----hhCCCCChHhHHHHHHHHhcCCCcc
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDK---FDKSLY-----EAHPCLQAEDIANTVEFILSSPPHV 210 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~---~~~~~~-----~~~~~~~pedvA~~v~fl~s~p~~~ 210 (214)
++.+.++ .++.+ .+|+.++||.+.|++........ ...... .....+.+||+|++++++++.+...
T Consensus 168 ~l~~~~~----~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~~~ 243 (274)
T PRK07775 168 AMVTNLQ----MELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETPRGA 243 (274)
T ss_pred HHHHHHH----HHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCCCCC
Confidence 9999998 55543 48999999999887543211110 001000 1122679999999999999987644
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.8e-09 Score=89.28 Aligned_cols=99 Identities=15% Similarity=0.182 Sum_probs=75.0
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHHHHHhhccCcchhhhCc--cc
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAARSLRFNLNDKNFCELFP--DL 158 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~~~~~~l~~~~~~e~~~--~~ 158 (214)
++|+..+++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.+++++++ .++.+ .+
T Consensus 141 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la----~e~~~~gI~ 216 (293)
T PRK05866 141 HDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIE----TEWGDRGVH 216 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHH----HHhcccCcE
Confidence 4567788888 56888999997654 678876422 69999999999999999 66654 49
Q ss_pred ccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 159 vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
|++++||.++|++...... ....+.++||++|+.++..+...
T Consensus 217 v~~v~pg~v~T~~~~~~~~-------~~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 217 STTLYYPLVATPMIAPTKA-------YDGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred EEEEEcCcccCcccccccc-------ccCCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999998753210 01123479999999999988764
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.5e-09 Score=86.47 Aligned_cols=126 Identities=14% Similarity=0.136 Sum_probs=87.8
Q ss_pred CCceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHHHHH
Q psy818 78 PNGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 78 ~~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
.++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+. + ++++|.++. .|+++|+++.+
T Consensus 73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~ 152 (274)
T PRK05693 73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHA 152 (274)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHH
Confidence 355777655322 234555667899999998 5688889988665 3 788887754 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCc---------hhh---Hh---HH--hhCCCCChHhHHHHHHH
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD---------KFD---KS---LY--EAHPCLQAEDIANTVEF 202 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~---------~~~---~~---~~--~~~~~~~pedvA~~v~f 202 (214)
++++++ .++.+ .+|++++||.++|++....... ... .. .. ....+.+|+++|+.++-
T Consensus 153 ~~~~l~----~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 228 (274)
T PRK05693 153 LSDALR----LELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLA 228 (274)
T ss_pred HHHHHH----HHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 999998 66554 4999999999999876532110 000 00 00 01224689999999998
Q ss_pred HhcCC
Q psy818 203 ILSSP 207 (214)
Q Consensus 203 l~s~p 207 (214)
.+..+
T Consensus 229 ~~~~~ 233 (274)
T PRK05693 229 AVQQS 233 (274)
T ss_pred HHhCC
Confidence 88754
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.9e-09 Score=87.28 Aligned_cols=118 Identities=14% Similarity=0.160 Sum_probs=84.2
Q ss_pred CceecCCCceeee---cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLCLS---MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic~~---~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.| ++.. ..+.+.++|..++++| .+++.+++.|.+.+ ++++|.++. .|+++|+++
T Consensus 80 d~lv~~ag-~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~ 158 (257)
T PRK07024 80 DVVIANAG-ISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAA 158 (257)
T ss_pred CEEEECCC-cCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHH
Confidence 55666544 3321 1123456788899998 56788889887654 788888754 699999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.+++++++ .++.+ .+|++++||.+.|++..... .......+||++|+.++.++.....
T Consensus 159 ~~~~~~l~----~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~~a~~~~~~l~~~~~ 218 (257)
T PRK07024 159 IKYLESLR----VELRPAGVRVVTIAPGYIRTPMTAHNP--------YPMPFLMDADRFAARAARAIARGRR 218 (257)
T ss_pred HHHHHHHH----HHhhccCcEEEEEecCCCcCchhhcCC--------CCCCCccCHHHHHHHHHHHHhCCCc
Confidence 99999998 55544 49999999999998653210 0011135899999999999987654
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.5e-09 Score=87.50 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=85.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... ..+.+.+.++|+..+++| .+++++++.|++.+ ++++|.++. .|+++|+++.+
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~ 162 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEG 162 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHHH
Confidence 44667544222 123445556788888888 55788888887654 677877543 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCC--------ch----hhHhHH-----hhCCCCChHhHHHHHHH
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG--------DK----FDKSLY-----EAHPCLQAEDIANTVEF 202 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~--------~~----~~~~~~-----~~~~~~~pedvA~~v~f 202 (214)
++++++ .++.+ .+|+.++||.++|++...... .. ...... ....+++|+|+|+++++
T Consensus 163 ~~~~l~----~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 238 (280)
T PRK06914 163 FSESLR----LELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVE 238 (280)
T ss_pred HHHHHH----HHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence 999998 55544 389999999999987542110 00 001110 11235799999999999
Q ss_pred HhcCCC
Q psy818 203 ILSSPP 208 (214)
Q Consensus 203 l~s~p~ 208 (214)
+++.+.
T Consensus 239 ~~~~~~ 244 (280)
T PRK06914 239 IAESKR 244 (280)
T ss_pred HHcCCC
Confidence 999874
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.9e-10 Score=84.94 Aligned_cols=91 Identities=19% Similarity=0.229 Sum_probs=75.5
Q ss_pred eecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHHHHHHHh
Q psy818 81 RFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLAARSLRF 144 (214)
Q Consensus 81 ~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a~~~~~~ 144 (214)
++++.|..|. +.+|.+.+.-+..+++| .+++++..++.+. | +|++|+++. .|+|+|+|+.++++
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~ 164 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYAR 164 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhh
Confidence 4555577785 58888889999999999 7899998666554 4 899999976 89999999999999
Q ss_pred hccCcchhhhCcc--cccccCccchhhhhcccc
Q psy818 145 NLNDKNFCELFPD--LVQSISPGLVKSQIFKSS 175 (214)
Q Consensus 145 ~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~ 175 (214)
+|+ .|+.|. +|..+.+|-+.|++.+..
T Consensus 165 tLr----lEl~PFgv~Vin~itGGv~T~Ia~k~ 193 (289)
T KOG1209|consen 165 TLR----LELKPFGVRVINAITGGVATDIADKR 193 (289)
T ss_pred hcE----EeeeccccEEEEecccceecccccCC
Confidence 999 777776 788888999999877653
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3e-09 Score=86.28 Aligned_cols=124 Identities=16% Similarity=0.180 Sum_probs=86.3
Q ss_pred CCceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 78 PNGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 78 ~~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
.++++|..|..- .++.+.+.++|...+++| .+++.+.+.|.+++ ++++|.++. .|+++|+++.
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 160 (263)
T PRK09072 81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALR 160 (263)
T ss_pred CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHH
Confidence 355677544321 234455556788888888 56788888887763 677777643 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+ .+|++++||.++|++...... ..... ......+|+|+|+.+++++....
T Consensus 161 ~~~~~l~----~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-~~~~~--~~~~~~~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 161 GFSEALR----RELADTGVRVLYLAPRATRTAMNSEAVQ-ALNRA--LGNAMDDPEDVAAAVLQAIEKER 223 (263)
T ss_pred HHHHHHH----HHhcccCcEEEEEecCcccccchhhhcc-ccccc--ccCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999 66544 389999999999987543211 00000 01235699999999999998753
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.8e-09 Score=85.41 Aligned_cols=111 Identities=14% Similarity=0.158 Sum_probs=77.1
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhh-h
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCE-L 154 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e-~ 154 (214)
+.+.+.++|+..+++| .+++.+.+.|.+.+ +++||.++. .|+++|+++.++++.++ .+ .
T Consensus 94 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~----~~~~ 169 (243)
T PRK07023 94 LATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVA----LDAN 169 (243)
T ss_pred cccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHH----hcCC
Confidence 4455667889999988 45788888887543 778888654 79999999999999998 44 1
Q ss_pred CcccccccCccchhhhhccccC--C-c--hhh---HhHHhhCCCCChHhHHH-HHHHHhcC
Q psy818 155 FPDLVQSISPGLVKSQIFKSSL--G-D--KFD---KSLYEAHPCLQAEDIAN-TVEFILSS 206 (214)
Q Consensus 155 ~~~~vn~v~pg~~~t~~~~~~~--~-~--~~~---~~~~~~~~~~~pedvA~-~v~fl~s~ 206 (214)
...++++|+||.++|++..... . + ... ..........+|+|+|+ ++.||.+.
T Consensus 170 ~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~ 230 (243)
T PRK07023 170 RALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSD 230 (243)
T ss_pred CCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcc
Confidence 2349999999999998753211 0 0 000 11111233579999999 56777764
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.9e-09 Score=84.09 Aligned_cols=127 Identities=17% Similarity=0.182 Sum_probs=89.4
Q ss_pred CCceecCCCceee--ec--CCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHH
Q psy818 78 PNGRFKTNTRLCL--SM--SDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQ 136 (214)
Q Consensus 78 ~~~~~h~ng~ic~--~~--l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K 136 (214)
.+.+.|+.|..-. .. ...+.++|++-+++| .+...+++.+++. + +|+||.++. .||.+|
T Consensus 83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K 162 (253)
T KOG1204|consen 83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK 162 (253)
T ss_pred eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence 3446776553321 11 134557899999999 3456788888776 3 899999876 899999
Q ss_pred HHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCc----h----hhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 137 LAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD----K----FDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~----~----~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+|...+.+.++.| |....+|-+++||.++|+|....... + ..++.......++|...|..+.+|+..-
T Consensus 163 aAr~m~f~~lA~E---Ep~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 163 AARNMYFMVLASE---EPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKG 238 (253)
T ss_pred HHHHHHHHHHhhc---CccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhc
Confidence 9999999999944 22244889999999999987533211 1 1233334445789999999999998653
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.3e-09 Score=85.45 Aligned_cols=126 Identities=20% Similarity=0.188 Sum_probs=85.7
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
+.++|.-|.. ...+.+.+.+.|+..+++| .+++.+.+.|...+ ++++|..+. .|+++|+|+.+++
T Consensus 92 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 171 (254)
T PRK12746 92 DILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMT 171 (254)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhhHHHHHHHH
Confidence 3456654421 1224445566788888888 56788888887665 777887653 6999999999999
Q ss_pred hhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHH----hhCCCCChHhHHHHHHHHhcCCC
Q psy818 144 FNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLY----EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 144 ~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~----~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.++ .++.+ .+|+.++||.+.|++.............. ......+++|||+++.++++.+.
T Consensus 172 ~~~~----~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 238 (254)
T PRK12746 172 LPLA----KHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDS 238 (254)
T ss_pred HHHH----HHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence 9998 56554 38999999999998764322211111111 11234599999999999998754
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.2e-09 Score=86.72 Aligned_cols=127 Identities=17% Similarity=0.269 Sum_probs=85.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|..- ..+.+.+.+.|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+++.
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 165 (260)
T PRK06198 86 DALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALA 165 (260)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHH
Confidence 44566544211 124455667888888888 5578888988654 3 677887653 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhcccc---C-C--chhhHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS---L-G--DKFDKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~---~-~--~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++.++ .++.+. +|++++||.+.|++.... . . .......... ....+|||+|++++||++.+.+
T Consensus 166 ~~~~~~a----~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~ 241 (260)
T PRK06198 166 TLTRNAA----YALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESG 241 (260)
T ss_pred HHHHHHH----HHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhC
Confidence 9999998 566543 899999999988763211 0 0 1111111111 1246999999999999986643
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.9e-09 Score=96.69 Aligned_cols=126 Identities=17% Similarity=0.147 Sum_probs=84.4
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++.+++.|+..+ ++++|.++. .|+++|+|+.
T Consensus 495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKaA~~ 574 (676)
T TIGR02632 495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEA 574 (676)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHHHHH
Confidence 4456654422 1335556667899999988 45678888887642 678887643 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhh--hhccccCC----------chhhHhHHhhC----CCCChHhHHHHHHH
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKS--QIFKSSLG----------DKFDKSLYEAH----PCLQAEDIANTVEF 202 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t--~~~~~~~~----------~~~~~~~~~~~----~~~~pedvA~~v~f 202 (214)
++++.++ .++.+. +||+|+||.+.+ .++..... .......+... ...+|||||++++|
T Consensus 575 ~l~r~lA----~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~ 650 (676)
T TIGR02632 575 HLARCLA----AEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFF 650 (676)
T ss_pred HHHHHHH----HHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHH
Confidence 9999999 677654 999999998753 33221110 11111111121 24699999999999
Q ss_pred HhcCCC
Q psy818 203 ILSSPP 208 (214)
Q Consensus 203 l~s~p~ 208 (214)
|++...
T Consensus 651 L~s~~~ 656 (676)
T TIGR02632 651 LASSKS 656 (676)
T ss_pred HhCCcc
Confidence 998643
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.4e-09 Score=83.91 Aligned_cols=125 Identities=16% Similarity=0.204 Sum_probs=85.9
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.... .+.+.+.+.|...+++| .+++++++.|.+.+ ++++|.++. .|+++|+++..
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~ 159 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG 159 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence 456676543221 23344556788888888 45788899887654 678887644 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.+.++ .++.+ .+++.+.||.+.|++..... .......... ....+|+|+|+++.||++.+.
T Consensus 160 ~~~~la----~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 226 (242)
T TIGR01829 160 FTKALA----QEGATKGVTVNTISPGYIATDMVMAMR-EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEA 226 (242)
T ss_pred HHHHHH----HHhhhhCeEEEEEeeCCCcCccccccc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 999998 55543 38999999999998764321 1111111111 224699999999999998754
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.8e-09 Score=84.66 Aligned_cols=115 Identities=11% Similarity=0.003 Sum_probs=77.8
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C---CCCCCCcCc------HHHHHHHHH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S---PTLGSIEMS------DYERRQLAA 139 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~---v~i~S~a~~------~Y~a~K~a~ 139 (214)
.++++|+.|.. ...+.+.++|+..+++| .+++++++.|.++ + +.++|.++. .|+++|+|+
T Consensus 80 iDilVnnAG~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~~~~~Y~aSKaal 157 (245)
T PRK12367 80 LDVLILNHGIN--PGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPALSPSYEISKRLI 157 (245)
T ss_pred CCEEEECCccC--CcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCCCCchhHHHHHHH
Confidence 45567755432 22344567899999999 6789999999652 2 223444332 699999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
..+. +++.+...+... .+|+.++||.++|++.. ...++|||+|+.++++++..+.
T Consensus 158 ~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~--------------~~~~~~~~vA~~i~~~~~~~~~ 214 (245)
T PRK12367 158 GQLV-SLKKNLLDKNERKKLIIRKLILGPFRSELNP--------------IGIMSADFVAKQILDQANLGLY 214 (245)
T ss_pred HHHH-HHHHHHHHhhcccccEEEEecCCCcccccCc--------------cCCCCHHHHHHHHHHHHhcCCc
Confidence 6654 555322233333 38899999999887521 1147999999999999988765
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.2e-09 Score=85.10 Aligned_cols=120 Identities=17% Similarity=0.165 Sum_probs=84.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|... ..+.+.+.++|...+++| .+++++.+.|.+.+ ++++|..+. .|+++|+++.+
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 157 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA 157 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence 44666544321 223344445666777777 56788889887643 778887653 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHV 210 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~ 210 (214)
++++++ .++.+ .+|++|+||.++|++..... .......+|||+|+.++.+++.+...
T Consensus 158 ~~~~l~----~el~~~gi~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~a~~i~~~~~~~~~~ 216 (243)
T PRK07102 158 FLSGLR----NRLFKSGVHVLTVKPGFVRTPMTAGLK--------LPGPLTAQPEEVAKDIFRAIEKGKDV 216 (243)
T ss_pred HHHHHH----HHhhccCcEEEEEecCcccChhhhccC--------CCccccCCHHHHHHHHHHHHhCCCCE
Confidence 999998 55554 39999999999998654311 01122578999999999999987543
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.8e-09 Score=84.96 Aligned_cols=127 Identities=16% Similarity=0.157 Sum_probs=85.1
Q ss_pred CceecCCCcee-eecCCC-CCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDF-HPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~-~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|..- ..+.+. +.+.|...+++| .+++.+.+.|.+.+ ++++|..+. .|+++|+++.+
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~ 159 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHG 159 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHH
Confidence 45667654322 224444 456677788888 55788888876543 677776643 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh--H-hHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD--K-SLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~--~-~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++.++ .++.+. +++++.||.+.|++.......... . ........++|+|+|++++++++....
T Consensus 160 ~~~~l~----~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~~ 228 (263)
T PRK06181 160 FFDSLR----IELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARRKR 228 (263)
T ss_pred HHHHHH----HHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCCCC
Confidence 999998 555443 899999999999876532211100 0 000112457999999999999986543
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.7e-09 Score=83.31 Aligned_cols=108 Identities=19% Similarity=0.248 Sum_probs=75.1
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc------HHHHHHHHHHHHHhhccCcchhhhCc-
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS------DYERRQLAARSLRFNLNDKNFCELFP- 156 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~------~Y~a~K~a~~~~~~~l~~~~~~e~~~- 156 (214)
+.+.+.|..++++| .+++.+.+.|.+. + ++++|.+.. .|+++|+|+.+++++++ .++.+
T Consensus 109 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~Y~~sK~a~~~l~~~la----~~~~~~ 184 (253)
T PRK08217 109 KMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTNYSASKAGVAAMTVTWA----KELARY 184 (253)
T ss_pred cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCCCchhHHHHHHHHHHHHHHH----HHHHHc
Confidence 34456777777777 4567788888654 2 566665432 89999999999999999 55544
Q ss_pred -ccccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcC
Q psy818 157 -DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSS 206 (214)
Q Consensus 157 -~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~ 206 (214)
.++++++||.+.|++..... +.......... ...+|||+|+++.||++.
T Consensus 185 ~i~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~ 237 (253)
T PRK08217 185 GIRVAAIAPGVIETEMTAAMK-PEALERLEKMIPVGRLGEPEEIAHTVRFIIEN 237 (253)
T ss_pred CcEEEEEeeCCCcCccccccC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcC
Confidence 49999999999998764321 11111111111 245999999999999964
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.78 E-value=8.2e-09 Score=80.69 Aligned_cols=115 Identities=19% Similarity=0.121 Sum_probs=81.8
Q ss_pred eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--C---CCCCCcCc----HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 90 LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--P---TLGSIEMS----DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 90 ~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v---~i~S~a~~----~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
.+++|++.|.|...+++. .+.+++.++|.+.+ + ..+|.-.. ..+.+|+++++-+|-|+ .+++
T Consensus 102 G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGvAKAaLEasvRyLA----~dlG 177 (259)
T COG0623 102 GDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLA----ADLG 177 (259)
T ss_pred CcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHHHHHHHHHHHHHHH----HHhC
Confidence 346677889999999988 67889999998765 2 12221111 67889999999999999 8888
Q ss_pred cc--cccccCccchhhhhccccCCchhhHhHHhh----CCCCChHhHHHHHHHHhcCCC
Q psy818 156 PD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA----HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 156 ~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~pedvA~~v~fl~s~p~ 208 (214)
+. |||+|+-|+++|--.....+-...-..... ....++|||+++++||+|.=+
T Consensus 178 ~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLs 236 (259)
T COG0623 178 KEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLS 236 (259)
T ss_pred ccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchh
Confidence 77 999999999998544332221111111122 224599999999999999643
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.4e-09 Score=83.96 Aligned_cols=127 Identities=15% Similarity=0.163 Sum_probs=86.9
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|..|.... .+.+.+.++|...+++| .+++.+++.|++.+ ++++|..+. .|+++|+++.+
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~ 162 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIAS 162 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHH
Confidence 456776553322 23445567788888888 45678888887653 678887543 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCC----chhhHhHHhh----CCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG----DKFDKSLYEA----HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~----~~~~~~~~~~----~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+.+.++ .++.+ .+|++++||.+.|++...... .......... ....+|+|+|++++++++.+..
T Consensus 163 ~~~~l~----~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~ 236 (252)
T PRK06138 163 LTRAMA----LDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESS 236 (252)
T ss_pred HHHHHH----HHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 999998 55543 499999999999887543221 1111111111 1245899999999999998763
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.1e-09 Score=83.90 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=77.1
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc--c
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP--D 157 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~--~ 157 (214)
+.+.++|+.++++| .+++++.++|...+ ++++|.++. .|+++|+++.++++.++ .++.+ .
T Consensus 89 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~----~e~~~~gi 164 (240)
T PRK06101 89 KVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQ----LDLRPKGI 164 (240)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHH----HHHHhcCc
Confidence 34567788999999 56888888886555 778887654 79999999999999998 55544 3
Q ss_pred cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 158 LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 158 ~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+|+++.||.+.|++...... .....++|||+|+.++..+...
T Consensus 165 ~v~~v~pg~i~t~~~~~~~~--------~~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 165 EVVTVFPGFVATPLTDKNTF--------AMPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred eEEEEeCCcCCCCCcCCCCC--------CCCcccCHHHHHHHHHHHHhcC
Confidence 89999999999987643110 0111369999999998877654
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.4e-09 Score=84.02 Aligned_cols=126 Identities=16% Similarity=0.168 Sum_probs=88.1
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|..|..-. .+.+.+.++|...+++| .+++++.+.|.+.+ ++++|.++. .|+++|+++.+
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 165 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLG 165 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence 346665443211 24445567788888888 46788888886653 677776643 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
+.+.++ .++.+ .+++.|.||.+.|++........ .......+++|+|+.++.+++.+..+.++
T Consensus 166 ~~~~~a----~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~a~~~~~~l~~~~~~~~~ 230 (239)
T PRK07666 166 LTESLM----QEVRKHNIRVTALTPSTVATDMAVDLGLTD-----GNPDKVMQPEDLAEFIVAQLKLNKRTFIK 230 (239)
T ss_pred HHHHHH----HHhhccCcEEEEEecCcccCcchhhccccc-----cCCCCCCCHHHHHHHHHHHHhCCCceEEE
Confidence 999998 55544 38999999999998654211000 01123479999999999999998766543
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=2e-09 Score=87.80 Aligned_cols=74 Identities=19% Similarity=0.292 Sum_probs=64.7
Q ss_pred CCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc--c
Q psy818 96 HPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD--L 158 (214)
Q Consensus 96 ~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~ 158 (214)
+.++|..++++| .++++++|++++. | ||++|+.|. .||+||+|+.+++.++| .|+.+. .
T Consensus 127 ~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR----~EL~~fGV~ 202 (322)
T KOG1610|consen 127 TVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLR----RELRPFGVK 202 (322)
T ss_pred cHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhHHHHHHHHHHHH----HHHHhcCcE
Confidence 446788999999 7799999999775 4 999999988 79999999999999999 777765 8
Q ss_pred ccccCccchhhhhcc
Q psy818 159 VQSISPGLVKSQIFK 173 (214)
Q Consensus 159 vn~v~pg~~~t~~~~ 173 (214)
|..|.||..+|++..
T Consensus 203 VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 203 VSIIEPGFFKTNLAN 217 (322)
T ss_pred EEEeccCccccccCC
Confidence 888999999988764
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=8.6e-09 Score=81.41 Aligned_cols=130 Identities=19% Similarity=0.271 Sum_probs=87.0
Q ss_pred CCceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHH
Q psy818 78 PNGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 78 ~~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
.++++|..|.... .+.+.+.++|...+++| .+++.+++.|.+.+ ++++|.++. .|+++|+++.+
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~ 151 (227)
T PRK08219 72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRA 151 (227)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence 3556776553322 23344556788888877 34677777776644 677777654 79999999999
Q ss_pred HHhhccCcchhhhCc-ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 142 LRFNLNDKNFCELFP-DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~-~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
+.+.++ .+..+ .+++++.||.+.+++........ ..........+++|+|++++++++.++...+.
T Consensus 152 ~~~~~~----~~~~~~i~~~~i~pg~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~~ 218 (227)
T PRK08219 152 LADALR----EEEPGNVRVTSVHPGRTDTDMQRGLVAQE--GGEYDPERYLRPETVAKAVRFAVDAPPDAHIT 218 (227)
T ss_pred HHHHHH----HHhcCCceEEEEecCCccchHhhhhhhhh--ccccCCCCCCCHHHHHHHHHHHHcCCCCCccc
Confidence 999998 55555 69999999998877543211100 00111123579999999999999998765543
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=8.6e-09 Score=82.46 Aligned_cols=126 Identities=17% Similarity=0.186 Sum_probs=83.2
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-----C--CCCCCCcCc--------HHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-----S--PTLGSIEMS--------DYERRQ 136 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-----~--v~i~S~a~~--------~Y~a~K 136 (214)
++++|..|.. ..++.+.+.++|+..+++| .+++++++.|.+. + ++++|.++. .|+++|
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK 160 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK 160 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence 4466654432 1234445556788888888 4567777877653 2 778886532 699999
Q ss_pred HHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCC---CCChHhHHHHHHHHhcCCC
Q psy818 137 LAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++++.++ .++.+ .++++++||.+.|++.................+ ..+|+|||++++|+++.+.
T Consensus 161 ~~~~~~~~~l~----~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 233 (247)
T PRK09730 161 GAIDTLTTGLS----LEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKA 233 (247)
T ss_pred HHHHHHHHHHH----HHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhh
Confidence 99999999998 55543 389999999999986543211111111111112 3489999999999998753
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.9e-09 Score=94.31 Aligned_cols=98 Identities=20% Similarity=0.296 Sum_probs=76.2
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc--ccc
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP--DLV 159 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~--~~v 159 (214)
++|+.++++| .+++++++.|++.+ ++++|.++. .|+++|+|+.+++++++ .++.+ .+|
T Consensus 472 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la----~e~~~~~i~v 547 (657)
T PRK07201 472 HDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAA----SETLSDGITF 547 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHH----HHHHhhCCcE
Confidence 4688888888 56788899997664 788888754 79999999999999999 66654 399
Q ss_pred cccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 160 QSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 160 n~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
|+|+||.++|++..... .......++||++|+.++..+..
T Consensus 548 ~~v~pg~v~T~~~~~~~-------~~~~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 548 TTIHMPLVRTPMIAPTK-------RYNNVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred EEEECCcCcccccCccc-------cccCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999864311 01122357999999999987654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.1e-08 Score=82.76 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=73.4
Q ss_pred cccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc--ccccccCc
Q psy818 103 AWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP--DLVQSISP 164 (214)
Q Consensus 103 ~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~p 164 (214)
.+++| .+++.+++.|.+++ ++++|.++. .|+++|+|+.+++++++ .++.+ .+|++|+|
T Consensus 114 ~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l~----~el~~~~i~v~~v~P 189 (253)
T PRK07904 114 IAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLG----EALREYGVRVLVVRP 189 (253)
T ss_pred HHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHH----HHHhhcCCEEEEEee
Confidence 46777 44688999998764 788888763 69999999999999998 55554 39999999
Q ss_pred cchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcc
Q psy818 165 GLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHV 210 (214)
Q Consensus 165 g~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~ 210 (214)
|.++|++...... .....+|||+|+.++.++..+++.
T Consensus 190 g~v~t~~~~~~~~---------~~~~~~~~~~A~~i~~~~~~~~~~ 226 (253)
T PRK07904 190 GQVRTRMSAHAKE---------APLTVDKEDVAKLAVTAVAKGKEL 226 (253)
T ss_pred CceecchhccCCC---------CCCCCCHHHHHHHHHHHHHcCCCE
Confidence 9999987653210 112469999999999999877554
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=7.9e-09 Score=83.22 Aligned_cols=125 Identities=16% Similarity=0.208 Sum_probs=84.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... ..+.+.+.++|...+++| .+++.+++.|.+.+ +++||.++. .|+++|+++.+
T Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~ 162 (258)
T PRK12429 83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIG 162 (258)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHH
Confidence 44566544322 224445556777777777 55888999997654 677887644 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCc----------hhhHhHH----hhCCCCChHhHHHHHHHHhc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD----------KFDKSLY----EAHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~----------~~~~~~~----~~~~~~~pedvA~~v~fl~s 205 (214)
+++.++ .++.+ .+|++++||.+.|++....... ....... ....+++++|+|++++||++
T Consensus 163 ~~~~l~----~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~ 238 (258)
T PRK12429 163 LTKVVA----LEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLAS 238 (258)
T ss_pred HHHHHH----HHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcC
Confidence 999998 55543 4899999999998775422110 0001111 11236799999999999998
Q ss_pred CC
Q psy818 206 SP 207 (214)
Q Consensus 206 ~p 207 (214)
.+
T Consensus 239 ~~ 240 (258)
T PRK12429 239 FA 240 (258)
T ss_pred cc
Confidence 64
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.9e-09 Score=83.47 Aligned_cols=126 Identities=17% Similarity=0.201 Sum_probs=84.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhh-ccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFM-VERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m-~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|..- ....+.+.+.|+..+++| .+++++++.| .+.+ +++||..+. .|+++|+++.
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~ 165 (262)
T PRK13394 86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLL 165 (262)
T ss_pred CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence 45667554321 123334456788888888 4588889998 5443 678887543 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCc----------hhhHhHHh----hCCCCChHhHHHHHHHHh
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD----------KFDKSLYE----AHPCLQAEDIANTVEFIL 204 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~----------~~~~~~~~----~~~~~~pedvA~~v~fl~ 204 (214)
++++.++ .++.+ .+++++.||.+.|++....... ........ .....+++|+|++++|++
T Consensus 166 ~~~~~la----~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~ 241 (262)
T PRK13394 166 GLARVLA----KEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLS 241 (262)
T ss_pred HHHHHHH----HHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc
Confidence 9999998 55543 4999999999998865322111 00111111 123669999999999999
Q ss_pred cCCC
Q psy818 205 SSPP 208 (214)
Q Consensus 205 s~p~ 208 (214)
+.+.
T Consensus 242 ~~~~ 245 (262)
T PRK13394 242 SFPS 245 (262)
T ss_pred Cccc
Confidence 8753
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.1e-08 Score=82.33 Aligned_cols=121 Identities=19% Similarity=0.303 Sum_probs=86.3
Q ss_pred cCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-CCCCCCcC-------cHHHHHHHHHHHHHhhc
Q psy818 83 KTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-PTLGSIEM-------SDYERRQLAARSLRFNL 146 (214)
Q Consensus 83 h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-v~i~S~a~-------~~Y~a~K~a~~~~~~~l 146 (214)
.+|+++. .++.+.+.++|+.++++| .+++.+.++|.++. ++++|.++ ..|+++|+|+.++++.+
T Consensus 91 vnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l 170 (251)
T COG1028 91 VNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKAL 170 (251)
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhcCCCCCcchHHHHHHHHHHHHHHH
Confidence 3454443 367777889999999999 44677777777444 78888874 38999999999999999
Q ss_pred cCcchhhhCc--ccccccCccchhhhhccccCCchh--hHhHH---hhCCCCChHhHHHHHHHHhcCC
Q psy818 147 NDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKF--DKSLY---EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 147 ~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~--~~~~~---~~~~~~~pedvA~~v~fl~s~p 207 (214)
+ .++.+ .+|++|+||.+.|++......... ..... .......|+++++.+.|+.+..
T Consensus 171 ~----~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (251)
T COG1028 171 A----LELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDE 234 (251)
T ss_pred H----HHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9 66654 499999999999988764322110 00110 1113457999999999998664
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.8e-08 Score=80.19 Aligned_cols=123 Identities=15% Similarity=0.194 Sum_probs=85.0
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
+.++|+.|.. ..++.+.+.++|...+++| .+++++++.|.... +++||.++. .|+++|+++.++
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~ 163 (237)
T PRK07326 84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGF 163 (237)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHH
Confidence 4466654422 1234445556777778777 56788888884332 678887653 799999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcccc
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i 212 (214)
++.++ .++.. .+++.+.||.+.|++....... ......+++|+|+.++++++.|+....
T Consensus 164 ~~~~~----~~~~~~gi~v~~v~pg~~~t~~~~~~~~~-------~~~~~~~~~d~a~~~~~~l~~~~~~~~ 224 (237)
T PRK07326 164 SEAAM----LDLRQYGIKVSTIMPGSVATHFNGHTPSE-------KDAWKIQPEDIAQLVLDLLKMPPRTLP 224 (237)
T ss_pred HHHHH----HHhcccCcEEEEEeeccccCcccccccch-------hhhccCCHHHHHHHHHHHHhCCccccc
Confidence 99998 55533 3899999999988765432111 011136899999999999999876544
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.7e-08 Score=78.99 Aligned_cols=105 Identities=15% Similarity=0.068 Sum_probs=72.9
Q ss_pred CCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC------------cHHHHHHHHHHHHHhhccCcchhhhCc--c
Q psy818 99 TWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM------------SDYERRQLAARSLRFNLNDKNFCELFP--D 157 (214)
Q Consensus 99 ~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~------------~~Y~a~K~a~~~~~~~l~~~~~~e~~~--~ 157 (214)
.|...+++| .+++++.+.|...+ ++++|..+ ..|+++|+++..+.+.++ .++.+ .
T Consensus 101 ~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~----~~~~~~~i 176 (248)
T PRK07806 101 DEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALR----PELAEKGI 176 (248)
T ss_pred CcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHH----HHhhccCe
Confidence 356666666 67888999886554 67777432 179999999999999998 66655 3
Q ss_pred cccccCccchhhhhccccC---Cchhh-HhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 158 LVQSISPGLVKSQIFKSSL---GDKFD-KSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 158 ~vn~v~pg~~~t~~~~~~~---~~~~~-~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+||+|+||.+.|++..... ..... ........+.+|+|||++++|+++.+
T Consensus 177 ~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 230 (248)
T PRK07806 177 GFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAP 230 (248)
T ss_pred EEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhcc
Confidence 9999999998887543211 11111 11112224679999999999999854
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.5e-08 Score=83.11 Aligned_cols=127 Identities=15% Similarity=0.082 Sum_probs=85.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYERR 135 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~a~ 135 (214)
+.++|+.|... ..+.+.+.++|+..+++| .+++++++.|.+. + ++++|.++. .|+++
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 164 (287)
T PRK06194 85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVS 164 (287)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHH
Confidence 45677654322 224455667899899988 5688888988653 3 678888754 69999
Q ss_pred HHHHHHHHhhccCcchhhhC----cccccccCccchhhhhccccCCch--------h------hHhHHhh---CCCCChH
Q psy818 136 QLAARSLRFNLNDKNFCELF----PDLVQSISPGLVKSQIFKSSLGDK--------F------DKSLYEA---HPCLQAE 194 (214)
Q Consensus 136 K~a~~~~~~~l~~~~~~e~~----~~~vn~v~pg~~~t~~~~~~~~~~--------~------~~~~~~~---~~~~~pe 194 (214)
|+++.+++++++ .++. ..|++++.||.+.|.+........ . ....... ....+++
T Consensus 165 K~a~~~~~~~l~----~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 240 (287)
T PRK06194 165 KHAVVSLTETLY----QDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAE 240 (287)
T ss_pred HHHHHHHHHHHH----HHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHH
Confidence 999999999998 4443 238999999999998764321100 0 0000011 1136999
Q ss_pred hHHHHHHHHhcCCCc
Q psy818 195 DIANTVEFILSSPPH 209 (214)
Q Consensus 195 dvA~~v~fl~s~p~~ 209 (214)
|+|+.++.++.....
T Consensus 241 dva~~i~~~~~~~~~ 255 (287)
T PRK06194 241 EVAQLVFDAIRAGRF 255 (287)
T ss_pred HHHHHHHHHHHcCCe
Confidence 999999998865543
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.1e-08 Score=79.23 Aligned_cols=125 Identities=17% Similarity=0.286 Sum_probs=82.2
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
+.++|..|.... ++.+.+.++|+..+++| .+++++.+.|...+ ++++|..+. .|+++|+++..+
T Consensus 87 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~ 166 (249)
T PRK09135 87 DALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEML 166 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHHHHH
Confidence 557776553221 23333445677788888 56788888886543 444544322 899999999999
Q ss_pred HhhccCcchhhhCcc-cccccCccchhhhhccccCCchhhHhHHhhCC---CCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p 207 (214)
.+.++ .++.+. +++++.||.+.++..................+ ..+++|+|+++.++++..
T Consensus 167 ~~~l~----~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 231 (249)
T PRK09135 167 TRSLA----LELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLADA 231 (249)
T ss_pred HHHHH----HHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence 99998 666554 89999999999887533222221111212222 348999999999998753
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.9e-08 Score=81.21 Aligned_cols=125 Identities=20% Similarity=0.266 Sum_probs=83.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~------~Y~a~K~a~~~~ 142 (214)
+.++|..|..- .++.+.+.+.|...+++| .+++++.+.|.+++ ++++|.++. .|+++|+++.++
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~y~~sK~a~~~~ 158 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYSAAKAGLIHY 158 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCCCcccHHHHHHHHHH
Confidence 45666544321 234445556787777777 56777778876543 667776432 799999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccCCc-hhh-HhHHh---hCCCCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD-KFD-KSLYE---AHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~-~~~-~~~~~---~~~~~~pedvA~~v~fl~s~p 207 (214)
++.++ .++.+ .+|++++||.+.|++....... ... ..... ....+.++|+|++++||++.+
T Consensus 159 ~~~~a----~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 226 (257)
T PRK07074 159 TKLLA----VEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPA 226 (257)
T ss_pred HHHHH----HHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCch
Confidence 99999 66665 4999999999998875432111 111 11111 123579999999999999754
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=2e-08 Score=80.23 Aligned_cols=125 Identities=19% Similarity=0.236 Sum_probs=85.5
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|..|.... ++.+.+.+.|+..+.+| .+++.+.+.|.+.+ ++++|..+. .|+++|+++..
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~ 164 (247)
T PRK05565 85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNA 164 (247)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHHHH
Confidence 456675543321 23445567788888888 46888888887663 677776542 79999999999
Q ss_pred HHhhccCcchhhhC--cccccccCccchhhhhccccCCchhhHhH---HhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLGDKFDKSL---YEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~~~~~~~~---~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.+.++ .++. ..++++++||.++|++....... ..... .......+|+|+|+.+++|++...
T Consensus 165 ~~~~~~----~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 231 (247)
T PRK05565 165 FTKALA----KELAPSGIRVNAVAPGAIDTEMWSSFSEE-DKEGLAEEIPLGRLGKPEEIAKVVLFLASDDA 231 (247)
T ss_pred HHHHHH----HHHHHcCeEEEEEEECCccCccccccChH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence 999998 4443 33899999999998876432211 11111 111224699999999999998764
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.6e-08 Score=81.42 Aligned_cols=124 Identities=15% Similarity=0.204 Sum_probs=83.3
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYE 133 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~ 133 (214)
++++|+.|..- .++.+.+.+.|+..+++| .+++++.+.|.++ + ++++|..+. .|+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 161 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC 161 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence 45677544211 124455567788888888 5677888887642 1 667887653 799
Q ss_pred HHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHh----hCCCCChHhHHHHHHHHhcCC
Q psy818 134 RRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYE----AHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~----~~~~~~pedvA~~v~fl~s~p 207 (214)
++|+++.++++.++ .++.+. +|++++||.+.|++..... +........ .....+|+|+|+++.|+++..
T Consensus 162 ~sK~a~~~~~~~l~----~~~~~~gi~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~ 236 (256)
T PRK12745 162 ISKAGLSMAAQLFA----ARLAEEGIGVYEVRPGLIKTDMTAPVT-AKYDALIAKGLVPMPRWGEPEDVARAVAALASGD 236 (256)
T ss_pred HHHHHHHHHHHHHH----HHHHHhCCEEEEEecCCCcCccccccc-hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCc
Confidence 99999999999998 555443 8999999999988654321 111111111 112448999999999999754
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.2e-08 Score=79.55 Aligned_cols=125 Identities=6% Similarity=-0.000 Sum_probs=84.4
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|.... ...+.+.++|+..+++| .+++++++.|++.+ +++||.++. .|+++|+++.+
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 157 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG 157 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence 557776543221 23344556788888888 66888888887654 778887753 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCC--------chh---hHhHHhhC---CCCChHhHHHHHHHHhc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG--------DKF---DKSLYEAH---PCLQAEDIANTVEFILS 205 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~--------~~~---~~~~~~~~---~~~~pedvA~~v~fl~s 205 (214)
+.+.++ .++.+ .+++.+.||.+.|++...... ... ........ ...+|+|+|++++.++.
T Consensus 158 ~~~~l~----~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~ 233 (276)
T PRK06482 158 FVEAVA----QEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASAD 233 (276)
T ss_pred HHHHHH----HHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHc
Confidence 999998 66544 388999999998876432111 000 11111111 13689999999999987
Q ss_pred CC
Q psy818 206 SP 207 (214)
Q Consensus 206 ~p 207 (214)
.+
T Consensus 234 ~~ 235 (276)
T PRK06482 234 QT 235 (276)
T ss_pred CC
Confidence 64
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.8e-08 Score=77.93 Aligned_cols=126 Identities=17% Similarity=0.239 Sum_probs=84.5
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|..|.... .+.+.+.+.|...+++| .+++.+.+.+.+.+ +++||..+. .|+++|+++.+
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~ 165 (249)
T PRK12825 86 DILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVG 165 (249)
T ss_pred CEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHHH
Confidence 446665552221 13344556788888887 55778888886654 677877643 79999999999
Q ss_pred HHhhccCcchhhhC--cccccccCccchhhhhccccCCchhhHh--HHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLGDKFDKS--LYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~~~~~~~--~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++. ..+++.+.||.+.+++............ ........+++|+|+.+.|+++.+.
T Consensus 166 ~~~~~~----~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 232 (249)
T PRK12825 166 LTKALA----RELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDAS 232 (249)
T ss_pred HHHHHH----HHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999998 4443 3489999999999987654322111111 0111224589999999999998753
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.3e-08 Score=90.76 Aligned_cols=124 Identities=19% Similarity=0.243 Sum_probs=85.7
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++.+.|+++ + ++++|.++. .|+++|+++.
T Consensus 500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~ 579 (681)
T PRK08324 500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAEL 579 (681)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHH
Confidence 4456654422 1235566778899999999 5678888888773 3 678887653 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccch--hhhhccccCC----------chhhHhHHhh----CCCCChHhHHHHHHH
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLV--KSQIFKSSLG----------DKFDKSLYEA----HPCLQAEDIANTVEF 202 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~--~t~~~~~~~~----------~~~~~~~~~~----~~~~~pedvA~~v~f 202 (214)
++++.++ .++.+ .+||+|+||.+ .|.++..... .......+.. ....+|+|||++++|
T Consensus 580 ~l~~~la----~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~ 655 (681)
T PRK08324 580 HLVRQLA----LELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVF 655 (681)
T ss_pred HHHHHHH----HHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHH
Confidence 9999998 67665 39999999999 7776532210 0000011111 125699999999999
Q ss_pred HhcC
Q psy818 203 ILSS 206 (214)
Q Consensus 203 l~s~ 206 (214)
|++.
T Consensus 656 l~s~ 659 (681)
T PRK08324 656 LASG 659 (681)
T ss_pred HhCc
Confidence 9963
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=7e-08 Score=80.59 Aligned_cols=128 Identities=13% Similarity=0.160 Sum_probs=84.4
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------------------H
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------------------D 131 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------------------~ 131 (214)
++++|+.|....+..+.+.++|+.++++| .+++.+++.|.+.. ++++|.++. .
T Consensus 95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 174 (313)
T PRK05854 95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRA 174 (313)
T ss_pred cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhh
Confidence 44566444322233355678899999999 55788899887543 778887531 6
Q ss_pred HHHHHHHHHHHHhhccCcchhhhC--cccccccCccchhhhhccccCC-----chhhHhHH---hh-C-CCCChHhHHHH
Q psy818 132 YERRQLAARSLRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLG-----DKFDKSLY---EA-H-PCLQAEDIANT 199 (214)
Q Consensus 132 Y~a~K~a~~~~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~-----~~~~~~~~---~~-~-~~~~pedvA~~ 199 (214)
|+++|+|+..+++.++.+ .+.. +.+||+++||.++|++...... ........ .. . ..-++++-|..
T Consensus 175 Y~~SK~a~~~~~~~la~~--~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~ 252 (313)
T PRK05854 175 YSQSKIAVGLFALELDRR--SRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILP 252 (313)
T ss_pred hHHHHHHHHHHHHHHHHH--hhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHHHHHH
Confidence 999999999999999732 1222 3499999999999987643110 00111111 11 1 12388999999
Q ss_pred HHHHhcCCC
Q psy818 200 VEFILSSPP 208 (214)
Q Consensus 200 v~fl~s~p~ 208 (214)
++|++..|.
T Consensus 253 ~l~~a~~~~ 261 (313)
T PRK05854 253 ALYAATSPD 261 (313)
T ss_pred hhheeeCCC
Confidence 999987664
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.4e-09 Score=78.88 Aligned_cols=106 Identities=18% Similarity=0.234 Sum_probs=80.2
Q ss_pred CCCCCcCcccHH-----HHHHHHHHhhccCC----------CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhh
Q psy818 96 HPDTWNPAWSVS-----TILTGLLSFMVERS----------PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCE 153 (214)
Q Consensus 96 ~~e~w~~~~~vn-----~~l~a~~~~m~~~~----------v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e 153 (214)
+.|++++++++| .+++...-+|-+.. +|..|+++. +|+++|+|+.+++--++ .+
T Consensus 109 ~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaaysaskgaivgmtlpia----rd 184 (260)
T KOG1199|consen 109 DLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAYSASKGAIVGMTLPIA----RD 184 (260)
T ss_pred cHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhhhcccCceEeeechhh----hh
Confidence 347899999999 56777777775421 789999866 89999999999999998 77
Q ss_pred hCcc--cccccCccchhhhhccccCCchhhHhHH-hhC----CCCChHhHHHHHHHHhcCC
Q psy818 154 LFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLY-EAH----PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 154 ~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~-~~~----~~~~pedvA~~v~fl~s~p 207 (214)
+.+. |+++|+||..+|++.... .+ ....+. +.. +.+.|.|-|..|.-....|
T Consensus 185 la~~gir~~tiapglf~tpllssl-pe-kv~~fla~~ipfpsrlg~p~eyahlvqaiienp 243 (260)
T KOG1199|consen 185 LAGDGIRFNTIAPGLFDTPLLSSL-PE-KVKSFLAQLIPFPSRLGHPHEYAHLVQAIIENP 243 (260)
T ss_pred cccCceEEEeecccccCChhhhhh-hH-HHHHHHHHhCCCchhcCChHHHHHHHHHHHhCc
Confidence 7766 999999999999987532 22 122221 122 2569999999998887766
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=1e-07 Score=76.70 Aligned_cols=124 Identities=19% Similarity=0.215 Sum_probs=83.5
Q ss_pred ceecCCCceee--ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 80 GRFKTNTRLCL--SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 80 ~~~h~ng~ic~--~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+++|+.| .+. ++.+.+.++|+..+++| .+++.+++.|.+.+ ++++|.++. .|+++|+++..
T Consensus 77 ~ii~~ag-~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~ 155 (256)
T PRK08017 77 GLFNNAG-FGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEA 155 (256)
T ss_pred EEEECCC-CCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence 3566544 322 34455667788888888 45667788887654 677877654 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCch----hhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDK----FDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~----~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.++++ .++.+ .+++.++||.+.|++........ ...........+.|||+|+++..+++.+.
T Consensus 156 ~~~~l~----~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 156 WSDALR----MELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred HHHHHH----HHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence 999998 44433 38999999999888765322111 00011111235799999999999998764
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.54 E-value=8.3e-08 Score=80.17 Aligned_cols=124 Identities=14% Similarity=0.191 Sum_probs=82.7
Q ss_pred CceecCCCceeee---cCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C--CCCCCCcC---------------
Q psy818 79 NGRFKTNTRLCLS---MSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S--PTLGSIEM--------------- 129 (214)
Q Consensus 79 ~~~~h~ng~ic~~---~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~--v~i~S~a~--------------- 129 (214)
++++|+.| +..+ ..+.+.++|+.++++| .+++.+++.|.+. + +++||.++
T Consensus 83 D~lI~nAG-~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 161 (314)
T TIGR01289 83 DALVCNAA-VYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL 161 (314)
T ss_pred CEEEECCC-ccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence 44556444 4322 2345667899999999 5688999999754 3 67777643
Q ss_pred -------------------------cHHHHHHHHHHHHHhhccCcchhhhC---cccccccCccch-hhhhccccCCchh
Q psy818 130 -------------------------SDYERRQLAARSLRFNLNDKNFCELF---PDLVQSISPGLV-KSQIFKSSLGDKF 180 (214)
Q Consensus 130 -------------------------~~Y~a~K~a~~~~~~~l~~~~~~e~~---~~~vn~v~pg~~-~t~~~~~~~~~~~ 180 (214)
..|+++|+|...+++.++ .++. +.+|++|+||.+ +|++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la----~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~ 237 (314)
T TIGR01289 162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELH----RRFHDETGITFASLYPGCIADTGLFREHVPLFR 237 (314)
T ss_pred cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHH----HHhccCCCeEEEEecCCcccCCcccccccHHHH
Confidence 159999999999999997 4442 349999999998 6887653211100
Q ss_pred --hHhH--HhhCCCCChHhHHHHHHHHhcCC
Q psy818 181 --DKSL--YEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 181 --~~~~--~~~~~~~~pedvA~~v~fl~s~p 207 (214)
.... .......+||+.|+.+++++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~ 268 (314)
T TIGR01289 238 TLFPPFQKYITKGYVSEEEAGERLAQVVSDP 268 (314)
T ss_pred HHHHHHHHHHhccccchhhhhhhhHHhhcCc
Confidence 0000 00112468999999999988764
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.1e-07 Score=76.37 Aligned_cols=115 Identities=12% Similarity=0.096 Sum_probs=80.5
Q ss_pred CceecCCCceee--ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHH
Q psy818 79 NGRFKTNTRLCL--SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic~--~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~ 139 (214)
++++|+. +++. .+.+.+.+.|...+++| .+++++.+.|.+.+ ++++|.++. .|+++|+++
T Consensus 83 d~vi~~a-g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 161 (248)
T PRK08251 83 DRVIVNA-GIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV 161 (248)
T ss_pred CEEEECC-CcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence 4466643 3332 23334445677778888 55778888886643 677776532 799999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
.++.+.++ .++.. .+|++|+||.++|++...... ....++|||.|+.++..+...
T Consensus 162 ~~~~~~l~----~~~~~~~i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 162 ASLGEGLR----AELAKTPIKVSTIEPGYIRSEMNAKAKS---------TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred HHHHHHHH----HHhcccCcEEEEEecCcCcchhhhcccc---------CCccCCHHHHHHHHHHHHhcC
Confidence 99999998 55543 389999999999987643210 112478999999998887764
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.3e-08 Score=76.85 Aligned_cols=126 Identities=17% Similarity=0.214 Sum_probs=83.6
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|..|..+. ++.+.+.++|...+++| .+++++.+.|.+++ ++++|..+. .|+++|+++.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~ 164 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLV 164 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHH
Confidence 446666554332 23344556777778777 56788888886653 667776643 7999999999
Q ss_pred HHHhhccCcchhhhC--cccccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
++.+.++ .++. +.+++.+.||.+.++.................. ....++|+|+++.+|++.+.
T Consensus 165 ~~~~~~~----~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 233 (251)
T PRK12826 165 GFTRALA----LELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEA 233 (251)
T ss_pred HHHHHHH----HHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 9999998 4543 348889999999988654322111011111111 24699999999999997653
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.1e-07 Score=76.30 Aligned_cols=124 Identities=12% Similarity=0.097 Sum_probs=79.4
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcC--------------------
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEM-------------------- 129 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~-------------------- 129 (214)
++++|+.|.. ....+.+.++|...+++| .+++.+++.|++.+ +++||.++
T Consensus 97 D~li~nAg~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~ 175 (306)
T PRK06197 97 DLLINNAGVM-YTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRV 175 (306)
T ss_pred CEEEECCccc-cCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcH
Confidence 4566654432 223345668899999999 45788999987653 67777641
Q ss_pred cHHHHHHHHHHHHHhhccCcchhhhCc--ccccc--cCccchhhhhccccCCchh-hHhHHhhCCCCChHhHHHHHHHHh
Q psy818 130 SDYERRQLAARSLRFNLNDKNFCELFP--DLVQS--ISPGLVKSQIFKSSLGDKF-DKSLYEAHPCLQAEDIANTVEFIL 204 (214)
Q Consensus 130 ~~Y~a~K~a~~~~~~~l~~~~~~e~~~--~~vn~--v~pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~pedvA~~v~fl~ 204 (214)
..|+++|+|+..+++.++ .++.+ .+|++ ++||.++|++......... ...........+||+-|..+++++
T Consensus 176 ~~Y~~SK~a~~~~~~~la----~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 251 (306)
T PRK06197 176 AAYGQSKLANLLFTYELQ----RRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRAA 251 (306)
T ss_pred HHHHHHHHHHHHHHHHHH----HHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHHh
Confidence 179999999999999998 66643 35665 4799999998654211100 011111111236777777777777
Q ss_pred cCC
Q psy818 205 SSP 207 (214)
Q Consensus 205 s~p 207 (214)
..+
T Consensus 252 ~~~ 254 (306)
T PRK06197 252 TDP 254 (306)
T ss_pred cCC
Confidence 655
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.5e-07 Score=75.02 Aligned_cols=123 Identities=14% Similarity=0.228 Sum_probs=80.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|..|..- ....+.+.+.|...+++| .+++++.+.+.+.+ +.++|.++. .|+++|+++.+
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~ 164 (248)
T PRK05557 85 DILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIG 164 (248)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHHH
Confidence 44666554321 123344456677777777 56777888876653 667776533 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
+.+.++ .++.+ .++++++||.++|++..... .......... ....+++|+|+++.+|++.
T Consensus 165 ~~~~~a----~~~~~~~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 229 (248)
T PRK05557 165 FTKSLA----RELASRGITVNAVAPGFIETDMTDALP-EDVKEAILAQIPLGRLGQPEEIASAVAFLASD 229 (248)
T ss_pred HHHHHH----HHhhhhCeEEEEEecCccCCccccccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999988 44433 38899999999887654321 1111111111 1246899999999999976
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.5e-07 Score=81.14 Aligned_cols=98 Identities=16% Similarity=0.149 Sum_probs=71.2
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC--------CCCCCCcC-----cHHHHHHHHHHHHHhhccCcchhhhC
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS--------PTLGSIEM-----SDYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--------v~i~S~a~-----~~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
+.+.++|+.++++| .+++++++.|++++ +|++|... ..|+++|+|+.+++. ++ .+..
T Consensus 260 ~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~~~~~~~Y~ASKaAl~~l~~-l~----~~~~ 334 (406)
T PRK07424 260 ERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVNPAFSPLYELSKRALGDLVT-LR----RLDA 334 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccccCCCchHHHHHHHHHHHHHH-HH----HhCC
Confidence 45567899999999 67899999997642 34443211 169999999999985 43 2334
Q ss_pred cccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcc
Q psy818 156 PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHV 210 (214)
Q Consensus 156 ~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~ 210 (214)
+..|.++.||.++|++.. ...++|||+|+.++++++..+..
T Consensus 335 ~~~I~~i~~gp~~t~~~~--------------~~~~spe~vA~~il~~i~~~~~~ 375 (406)
T PRK07424 335 PCVVRKLILGPFKSNLNP--------------IGVMSADWVAKQILKLAKRDFRN 375 (406)
T ss_pred CCceEEEEeCCCcCCCCc--------------CCCCCHHHHHHHHHHHHHCCCCE
Confidence 667888889988776521 12479999999999999887654
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.7e-08 Score=79.33 Aligned_cols=120 Identities=17% Similarity=0.154 Sum_probs=86.3
Q ss_pred CceecCCC-ceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNT-RLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng-~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++++.| .+|.-+.+.+.+..+..+++| .+++++++.|+++. +.++|.++. +|+++|+|+.
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alr 193 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALR 193 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHH
Confidence 33556543 445557788889999999999 67999999998865 567887766 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCC-chhhHhHHhh-CCCCChHhHHHHHHH
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG-DKFDKSLYEA-HPCLQAEDIANTVEF 202 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~~-~~~~~pedvA~~v~f 202 (214)
++...++ .|+.++ .|....|+.+.|+.+..... .+..-..... ....++||+|.+++-
T Consensus 194 gLa~~l~----qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~ 255 (331)
T KOG1210|consen 194 GLAEALR----QELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVK 255 (331)
T ss_pred HHHHHHH----HHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHh
Confidence 9999999 666544 78888999998886643211 1111111111 225699999999864
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=9.6e-08 Score=75.86 Aligned_cols=120 Identities=18% Similarity=0.306 Sum_probs=81.4
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|..|.... .+.+.+.++|...+++| .+++++.+.|.+.+ ++++|..+. .|+++|+++..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~ 163 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVAR 163 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHH
Confidence 456675554332 23344456677777777 56788888886543 678887643 79999999999
Q ss_pred HHhhccCcchhhhC--cccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.+.++ .++. ..+++.+.||.+.+++........ ......+++|||++++|+++.+.
T Consensus 164 ~~~~~a----~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~------~~~~~~~~~dva~~~~~~l~~~~ 222 (239)
T PRK12828 164 LTEALA----AELLDRGITVNAVLPSIIDTPPNRADMPDA------DFSRWVTPEQIAAVIAFLLSDEA 222 (239)
T ss_pred HHHHHH----HHhhhcCeEEEEEecCcccCcchhhcCCch------hhhcCCCHHHHHHHHHHHhCccc
Confidence 999988 4443 348999999999887543211110 11124689999999999998653
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.5e-07 Score=73.15 Aligned_cols=110 Identities=11% Similarity=0.120 Sum_probs=77.7
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc----------HHHHHHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS----------DYERRQL 137 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~----------~Y~a~K~ 137 (214)
++++|..|..- ....+.+.++|+..+++| .+++++.+.|.+. + ++++|.++. .|+++|+
T Consensus 72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~ 151 (222)
T PRK06953 72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKA 151 (222)
T ss_pred CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHH
Confidence 55666543221 123345667899999999 5678888888553 3 677776542 3999999
Q ss_pred HHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhc
Q psy818 138 AARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 138 a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s 205 (214)
++.++.+.++ .+..+.+||+|+||.++|++... ..++.+++.++.+.-++.
T Consensus 152 a~~~~~~~~~----~~~~~i~v~~v~Pg~i~t~~~~~-------------~~~~~~~~~~~~~~~~~~ 202 (222)
T PRK06953 152 ALNDALRAAS----LQARHATCIALHPGWVRTDMGGA-------------QAALDPAQSVAGMRRVIA 202 (222)
T ss_pred HHHHHHHHHh----hhccCcEEEEECCCeeecCCCCC-------------CCCCCHHHHHHHHHHHHH
Confidence 9999999998 55545599999999999987532 123677888888777543
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.3e-07 Score=75.02 Aligned_cols=92 Identities=20% Similarity=0.092 Sum_probs=67.3
Q ss_pred CCceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc----------HHHHHH
Q psy818 78 PNGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS----------DYERRQ 136 (214)
Q Consensus 78 ~~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~----------~Y~a~K 136 (214)
.+.++|+.|... .++.+.+.++|...+++| .+++++++.|... + ++++|..+. .|+++|
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK 151 (225)
T PRK08177 72 FDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASK 151 (225)
T ss_pred CCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHH
Confidence 355777655432 124455667888888888 5678888888755 3 566665432 699999
Q ss_pred HHHHHHHhhccCcchhhhCc--ccccccCccchhhhhcc
Q psy818 137 LAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFK 173 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~ 173 (214)
+++.++++.++ .++.+ .+||+|+||+++|++..
T Consensus 152 ~a~~~~~~~l~----~e~~~~~i~v~~i~PG~i~t~~~~ 186 (225)
T PRK08177 152 AALNSMTRSFV----AELGEPTLTVLSMHPGWVKTDMGG 186 (225)
T ss_pred HHHHHHHHHHH----HHhhcCCeEEEEEcCCceecCCCC
Confidence 99999999999 56554 49999999999999754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.8e-07 Score=74.19 Aligned_cols=126 Identities=11% Similarity=0.101 Sum_probs=82.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|... .++.+.+.+.|++.+++| .+++.+++.|.+.+ +++||..+. .|+++|+++.+
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~ 154 (257)
T PRK09291 75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA 154 (257)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence 45677654321 234455667788888888 45677888887654 678887654 79999999999
Q ss_pred HHhhccCcchhhhC--cccccccCccchhhhhccccCC------chhhH--hHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLG------DKFDK--SLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~------~~~~~--~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++. +.+++.|+||.+.|++...... +.... .... .....+++|+++.++-++..+.
T Consensus 155 ~~~~l~----~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (257)
T PRK09291 155 IAEAMH----AELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPADT 230 (257)
T ss_pred HHHHHH----HHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCCC
Confidence 999998 5553 3489999999998876432110 00000 0000 1123589999988888776553
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.8e-07 Score=73.40 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=72.7
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHHHhhccCcchhhhC--ccccc
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSLRFNLNDKNFCELF--PDLVQ 160 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~~~~l~~~~~~e~~--~~~vn 160 (214)
+.|+.++++| .+++.+++.|.+.+ ++++|..+. .|+++|+++..+.+.++ .++. ..+++
T Consensus 101 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~----~~~~~~gi~v~ 176 (238)
T PRK05786 101 SGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILA----SELLGRGIRVN 176 (238)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHHH----HHHhhcCeEEE
Confidence 4566677777 56888888887655 667776542 69999999999999998 5553 34999
Q ss_pred ccCccchhhhhccccCCchhhHhHHh-hCCCCChHhHHHHHHHHhcCCC
Q psy818 161 SISPGLVKSQIFKSSLGDKFDKSLYE-AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 161 ~v~pg~~~t~~~~~~~~~~~~~~~~~-~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+||.+.|++... ........ ......++|+|++++|+++.+.
T Consensus 177 ~i~pg~v~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~ 221 (238)
T PRK05786 177 GIAPTTISGDFEPE----RNWKKLRKLGDDMAPPEDFAKVIIWLLTDEA 221 (238)
T ss_pred EEecCccCCCCCch----hhhhhhccccCCCCCHHHHHHHHHHHhcccc
Confidence 99999998875321 00011101 1124689999999999998654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.35 E-value=5.9e-07 Score=71.36 Aligned_cols=125 Identities=15% Similarity=0.263 Sum_probs=81.2
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|..|..-. .+.+.+.+.|...+++| .+++.+.+.|...+ +.+||.++. .|+++|+++..
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~ 157 (239)
T TIGR01830 78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIG 157 (239)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHH
Confidence 456676553221 13344456777788877 45677777775432 677887543 79999999999
Q ss_pred HHhhccCcchhhhC--cccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.+.++ .++. ..+++.+.||.+.|++.... ........... ....+++|+|+.++++++...
T Consensus 158 ~~~~l~----~~~~~~g~~~~~i~pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 224 (239)
T TIGR01830 158 FTKSLA----KELASRNITVNAVAPGFIDTDMTDKL-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEA 224 (239)
T ss_pred HHHHHH----HHHhhcCeEEEEEEECCCCChhhhhc-ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCccc
Confidence 999998 4432 33889999999988765432 11111111111 225689999999999997653
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.5e-07 Score=73.66 Aligned_cols=124 Identities=15% Similarity=0.273 Sum_probs=81.6
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|..|.... +..+.+.++|...++.| .+++++.+.|.+.+ +.+||..+. .|+.+|+++..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~ 163 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIG 163 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHH
Confidence 556776554322 23344556677777777 55778888886544 667776543 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+. +++.+.||.+.++..... ........... ....+++|+|+.++|+++..
T Consensus 164 ~~~~l~----~~~~~~~i~~~~i~pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~ 229 (246)
T PRK05653 164 FTKALA----LELASRGITVNAVAPGFIDTDMTEGL-PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDA 229 (246)
T ss_pred HHHHHH----HHHhhcCeEEEEEEeCCcCCcchhhh-hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 999998 555433 889999999988765321 11111111111 22468999999999999753
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.3e-07 Score=73.63 Aligned_cols=125 Identities=15% Similarity=0.282 Sum_probs=79.6
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|..|..-. ...+.+.++|+.++.+| .+++.+++.|.+.+ +.+||.++. .|+++|+++.+
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~ 159 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG 159 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence 346665443211 12233445667777777 45777888886543 667776532 79999999999
Q ss_pred HHhhccCcchhhhC--cccccccCccchhhhhccccCC----------chhhHh-HH---hhCCCCChHhHHHHHHHHhc
Q psy818 142 LRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLG----------DKFDKS-LY---EAHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 142 ~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~----------~~~~~~-~~---~~~~~~~pedvA~~v~fl~s 205 (214)
+++.++ .++. ..+|++++||.+.+++...... ...... .. .....++++|+|++++++++
T Consensus 160 ~~~~~~----~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~ 235 (255)
T TIGR01963 160 LTKVLA----LEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLAS 235 (255)
T ss_pred HHHHHH----HHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcC
Confidence 999988 4443 3389999999998876432110 000000 10 11236799999999999998
Q ss_pred CC
Q psy818 206 SP 207 (214)
Q Consensus 206 ~p 207 (214)
.+
T Consensus 236 ~~ 237 (255)
T TIGR01963 236 DA 237 (255)
T ss_pred cc
Confidence 64
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.29 E-value=9.8e-07 Score=70.28 Aligned_cols=114 Identities=16% Similarity=0.137 Sum_probs=79.2
Q ss_pred CceecCCCc-e-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTR-L-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~-i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++|..|. . ...+.+.+.++|...+++| .+++++.+.|...+ ++++|..+. .|+++|+++.
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~ 154 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAW 154 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHH
Confidence 556776553 1 1234555667888888888 56778888886553 667776643 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
++.+.++ .++.+ .+++++.||.++|++..... ....+++++|+.++..+...
T Consensus 155 ~~~~~l~----~~~~~~~i~~~~v~pg~v~t~~~~~~~-----------~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 155 SLTQALR----AELAPQGTRVLGVHPGPIDTDMAAGLD-----------APKASPADVARQILDALEAG 208 (238)
T ss_pred HHHHHHH----HHhhhcCeEEEEEeCCcccccccccCC-----------cCCCCHHHHHHHHHHHHhCC
Confidence 9999998 56543 38999999999988753211 11356777777776665544
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.3e-06 Score=70.63 Aligned_cols=124 Identities=19% Similarity=0.280 Sum_probs=79.6
Q ss_pred CceecCCCce-e-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRL-C-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~i-c-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|..|.. - ..+.+.+.++|..++++| .+++++.+.|... + +.++|.++. .|+++|+++
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~ 167 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAV 167 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHH
Confidence 4466654432 1 123344556788888888 4567777776543 2 456665542 699999999
Q ss_pred HHHHhhccCcchhhhC--cccccccCccchhhhhccccCCc----------hhhHhHHhh---CCCCChHhHHHHHHHHh
Q psy818 140 RSLRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLGD----------KFDKSLYEA---HPCLQAEDIANTVEFIL 204 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~~----------~~~~~~~~~---~~~~~pedvA~~v~fl~ 204 (214)
..+.+.++ .++. ..+++++.||.+.|++....... ......... .....+||+|+++.+++
T Consensus 168 ~~~~~~l~----~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~ 243 (264)
T PRK12829 168 VGLVKSLA----IELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLA 243 (264)
T ss_pred HHHHHHHH----HHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 99999998 4443 34899999999988765432110 001111111 12568999999999998
Q ss_pred cC
Q psy818 205 SS 206 (214)
Q Consensus 205 s~ 206 (214)
+.
T Consensus 244 ~~ 245 (264)
T PRK12829 244 SP 245 (264)
T ss_pred Cc
Confidence 74
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=98.14 E-value=8.9e-07 Score=72.42 Aligned_cols=89 Identities=22% Similarity=0.197 Sum_probs=70.5
Q ss_pred eecCCCceee----ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 81 RFKTNTRLCL----SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 81 ~~h~ng~ic~----~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.-+|.+++. .+++.+.+..+..+++| .+++.++|.|.+++ +|+||.+|. .|+++|+.+.
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~ 208 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVD 208 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHH
Confidence 4444555544 25565555677888888 67899999998865 899999988 8999999999
Q ss_pred HHHhhccCcchhhhC--cccccccCccchhhhhcc
Q psy818 141 SLRFNLNDKNFCELF--PDLVQSISPGLVKSQIFK 173 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~ 173 (214)
.|+.+|+ .|+. +..|-++.|+++.|.|..
T Consensus 209 ~~S~~L~----~Ey~~~gI~Vq~v~p~~VaTkm~~ 239 (312)
T KOG1014|consen 209 FFSRCLQ----KEYESKGIFVQSVIPYLVATKMAK 239 (312)
T ss_pred HHHHHHH----HHHHhcCeEEEEeehhheeccccc
Confidence 9999999 5554 448889999999998764
|
|
| >KOG0897|consensus | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.7e-06 Score=57.61 Aligned_cols=71 Identities=20% Similarity=0.443 Sum_probs=55.8
Q ss_pred EEEEEECCCCCCCCCCeEEEEcCC---ceecCCCceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCCCCCCCc
Q psy818 56 YLGKLVFPRDFPFKPPSIYMITPN---GRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIE 128 (214)
Q Consensus 56 f~~~i~fp~~YP~~pP~v~f~t~~---~~~h~ng~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v~i~S~a 128 (214)
.-+.+.|+.|||+.||.++...|. |-+--||.||+.++. .+.|...++|..++.++...+.+.+--+.+-+
T Consensus 13 ill~~~f~~~fp~~ppf~rvv~p~~~~Gyvl~ggAIcmellt--~qgwssay~Ve~vi~qiaatlVkG~~ri~~~a 86 (122)
T KOG0897|consen 13 ILLLDIFDDNFPFMPPFPRVVKPLEDEGYVLEGGAICMELLT--KQGWSSAYEVERVIMQIAATLVKGGARIEFPA 86 (122)
T ss_pred eEeeeecccCCCCCCCcceeeeecccCCEEecchhhHHHHHc--cccccchhhHHHHHHHHHHHhhccceeEecCc
Confidence 346788999999999999999982 223346889998864 58999999999999998888887764444444
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.2e-05 Score=65.62 Aligned_cols=125 Identities=13% Similarity=0.146 Sum_probs=79.4
Q ss_pred CceecCCCceeee---cCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C--CCCCCCcC---------------
Q psy818 79 NGRFKTNTRLCLS---MSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S--PTLGSIEM--------------- 129 (214)
Q Consensus 79 ~~~~h~ng~ic~~---~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~--v~i~S~a~--------------- 129 (214)
++++|+. ++... ..+.+.++|+..+++| .+++.+++.|++. + +++||.+.
T Consensus 85 D~li~nA-g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~ 163 (322)
T PRK07453 85 DALVCNA-AVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA 163 (322)
T ss_pred cEEEECC-cccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence 4456643 33322 2344667899999999 5688889988654 2 66666421
Q ss_pred ---------------------------cHHHHHHHHHHHHHhhccCcchhhhC---cccccccCccch-hhhhccccCCc
Q psy818 130 ---------------------------SDYERRQLAARSLRFNLNDKNFCELF---PDLVQSISPGLV-KSQIFKSSLGD 178 (214)
Q Consensus 130 ---------------------------~~Y~a~K~a~~~~~~~l~~~~~~e~~---~~~vn~v~pg~~-~t~~~~~~~~~ 178 (214)
..|+.+|++...+++.++ .++. +.+|++++||.+ .|++.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la----~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~ 239 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELH----RRYHESTGITFSSLYPGCVADTPLFRNTPPL 239 (322)
T ss_pred chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHH----HhhcccCCeEEEEecCCcccCCcccccCCHH
Confidence 169999999999999998 4442 349999999998 57765432110
Q ss_pred h-hhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 179 K-FDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 179 ~-~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
. ........ ....+++.-|+.+++++..|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (322)
T PRK07453 240 FQKLFPWFQKNITGGYVSQELAGERVAQVVADPE 273 (322)
T ss_pred HHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcc
Confidence 0 00010001 112477888888888887653
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.82 E-value=8.8e-06 Score=63.00 Aligned_cols=87 Identities=15% Similarity=0.108 Sum_probs=60.3
Q ss_pred ecCCCceeeec--C--CCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 82 FKTNTRLCLSM--S--DFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 82 ~h~ng~ic~~~--l--~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
.-+|+||.... . +-..+.-...+.+| +++..++|++.++. +|+||--+. .||++|+|+.+
T Consensus 82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHs 161 (245)
T COG3967 82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHS 161 (245)
T ss_pred eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHH
Confidence 34467776542 1 11112233456666 67899999998874 899998766 79999999999
Q ss_pred HHhhccCcchhhhCcccccccCccchhhh
Q psy818 142 LRFNLNDKNFCELFPDLVQSISPGLVKSQ 170 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~~vn~v~pg~~~t~ 170 (214)
++.+||.. .+-....|-.+.|..|+|.
T Consensus 162 yt~aLR~Q--lk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 162 YTLALREQ--LKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHH--hhhcceEEEEecCCceecC
Confidence 99999833 2222347777888888875
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=97.80 E-value=3.6e-05 Score=64.26 Aligned_cols=120 Identities=20% Similarity=0.176 Sum_probs=85.3
Q ss_pred cCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcC----c----------------HHH
Q psy818 83 KTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEM----S----------------DYE 133 (214)
Q Consensus 83 h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~----~----------------~Y~ 133 (214)
.+|+|+...-...+.|..+..+.+| .++..++|.|+... ||++|..+ . +|+
T Consensus 119 InNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~ 198 (314)
T KOG1208|consen 119 INNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYA 198 (314)
T ss_pred EeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccchhHHH
Confidence 3477776554466678899999999 56889999998653 78888664 1 499
Q ss_pred HHHHHHHHHHhhccCcchhhhC-cccccccCccchhhhhccccCCchhhHhHHhh--CCC-CChHhHHHHHHHHhcCCC
Q psy818 134 RRQLAARSLRFNLNDKNFCELF-PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEA--HPC-LQAEDIANTVEFILSSPP 208 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~-~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~--~~~-~~pedvA~~v~fl~s~p~ 208 (214)
.+|.+...+++.++ ..+. ...++++.||.+.|....+. .......... .+. -+++.-|+.++|++-.|.
T Consensus 199 ~SKla~~l~~~eL~----k~l~~~V~~~~~hPG~v~t~~l~r~--~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~ 271 (314)
T KOG1208|consen 199 LSKLANVLLANELA----KRLKKGVTTYSVHPGVVKTTGLSRV--NLLLRLLAKKLSWPLTKSPEQGAATTCYAALSPE 271 (314)
T ss_pred HhHHHHHHHHHHHH----HHhhcCceEEEECCCcccccceecc--hHHHHHHHHHHHHHhccCHHHHhhheehhccCcc
Confidence 99999999999998 4554 34889999999999833331 1111111111 111 378999999999998884
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.76 E-value=1.1e-05 Score=82.90 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=66.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCCCCCCCCcCc-------HHHHHHHHHHHHHhh
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERSPTLGSIEMS-------DYERRQLAARSLRFN 145 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~v~i~S~a~~-------~Y~a~K~a~~~~~~~ 145 (214)
++++|+.|... ..+.+.+.++|+.++++| .+++++.+.+...=+++||++|. .|+++|+++.++++.
T Consensus 2123 DgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~ 2202 (2582)
T TIGR02813 2123 TGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQ 2202 (2582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 44666544221 236677889999999999 33444444332222789999875 899999999999999
Q ss_pred ccCcchhhhCcccccccCccchhhhhcc
Q psy818 146 LNDKNFCELFPDLVQSISPGLVKSQIFK 173 (214)
Q Consensus 146 l~~~~~~e~~~~~vn~v~pg~~~t~~~~ 173 (214)
++ .+....+|++|+||.++|.|..
T Consensus 2203 la----~~~~~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2203 LK----ALNPSAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred HH----HHcCCcEEEEEECCeecCCccc
Confidence 98 6665569999999999998753
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PF14461 Prok-E2_B: Prokaryotic E2 family B | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00013 Score=53.33 Aligned_cols=67 Identities=30% Similarity=0.716 Sum_probs=54.3
Q ss_pred CCcEEEEEEECCCCCCCCCCeEEEEcCCc-----eecCCCceeeecCCCCCCCCcCcccHHHHHHHHHHhhc
Q psy818 52 EGGMYLGKLVFPRDFPFKPPSIYMITPNG-----RFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMV 118 (214)
Q Consensus 52 ~gg~f~~~i~fp~~YP~~pP~v~f~t~~~-----~~h~ng~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~ 118 (214)
.|+.|.+.|.||++||..||.|....+.. +...+|.+|..-.+...+.|++.-.+..+++.+...+.
T Consensus 34 ~~~~~~l~l~~p~~FP~~pp~v~l~d~~~~~~~pHv~~~G~LCl~~~~~~~D~~~P~~~~~~~l~~a~~lL~ 105 (133)
T PF14461_consen 34 GGGPFPLRLVFPDDFPYLPPRVYLEDPKQFPLLPHVESDGKLCLLDEELVLDPWDPEGIIADCLERAIRLLE 105 (133)
T ss_pred CCeEEEEEEEECCcccCcCCEEEecCccccCccCeEcCCCeEEEecCCcccCccCHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999998876431 34457999985446677889998888888888777775
|
|
| >PF08694 UFC1: Ubiquitin-fold modifier-conjugating enzyme 1; InterPro: IPR014806 Ubiquitin-like (UBL) post-translational modifiers are covalently linked to most, if not all, target protein(s) through an enzymatic cascade analogous to ubiquitylation, consisting of E1 (activating), E2 (conjugating), and E3 (ligating) enzymes | Back alignment and domain information |
|---|
Probab=97.60 E-value=3e-05 Score=55.80 Aligned_cols=80 Identities=26% Similarity=0.443 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcE----------EEEEEECCCCCCCCCCeEEEE
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGM----------YLGKLVFPRDFPFKPPSIYMI 76 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~----------f~~~i~fp~~YP~~pP~v~f~ 76 (214)
.-..||.+||..|.+ ++..++++-..|.-.=.-+.||-|.|-. |.+++.+|..||..||-|..-
T Consensus 24 ~W~~RLKEEy~aLI~------Yv~~nK~~DndWF~lesn~~GT~W~GkCW~~h~l~kYEF~~eFdIP~tYP~t~pEi~lP 97 (161)
T PF08694_consen 24 LWVQRLKEEYQALIK------YVENNKENDNDWFRLESNKEGTRWFGKCWYIHNLLKYEFDLEFDIPVTYPTTAPEIALP 97 (161)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHHHTT---EEEEE-TTSSEEEEEEEEEETTEEEEEEEEEE--TTTTTS----B-G
T ss_pred HHHHHHHHHHHHHHH------HHHhcccccCCeEEeccCCCCCccccEEEEEeeeeeEEEeeecCCCccCCCCCcceecc
Confidence 456899999999865 1222223333444333445555555432 567778899999999999877
Q ss_pred cCCc---eecCCCceeeec
Q psy818 77 TPNG---RFKTNTRLCLSM 92 (214)
Q Consensus 77 t~~~---~~h~ng~ic~~~ 92 (214)
.-+| -.+-.|.||+..
T Consensus 98 eLdGKTaKMYRGGkIClt~ 116 (161)
T PF08694_consen 98 ELDGKTAKMYRGGKICLTD 116 (161)
T ss_dssp GGTTT-SSBCCCCBB---T
T ss_pred ccCCchhhhhcCceEeeec
Confidence 6332 233468999974
|
Ubiquitin-fold modifier 1 (Ufm1) a ubiquitin-like protein is activated by a novel E1-like enzyme, Uba5, by forming a high-energy thioester bond. Activated Ufm1 is then transferred to its cognate E2-like enzyme, Ufc1, in a similar thioester linkage. This family represents the E2-like enzyme [].; PDB: 2Z6P_A 2K07_A 2Z6O_A 3EVX_D 3KPA_A. |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.48 E-value=1.2e-05 Score=60.45 Aligned_cols=67 Identities=18% Similarity=0.212 Sum_probs=50.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
+.++|+.|... .++.+.+.+.|+.++++| .+.+++++ ...+ ++++|.++. .|+++|+|+.+|+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~ 159 (167)
T PF00106_consen 82 DILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLT 159 (167)
T ss_dssp SEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccCCCCChhHHHHHHHHHHHH
Confidence 33555444322 345566678899999999 55777777 3344 888888876 8999999999999
Q ss_pred hhcc
Q psy818 144 FNLN 147 (214)
Q Consensus 144 ~~l~ 147 (214)
++++
T Consensus 160 ~~la 163 (167)
T PF00106_consen 160 QSLA 163 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9998
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG3357|consensus | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00027 Score=50.09 Aligned_cols=89 Identities=25% Similarity=0.508 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcE----------EEEEEECCCCCCCCCCeEEEE
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGM----------YLGKLVFPRDFPFKPPSIYMI 76 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~----------f~~~i~fp~~YP~~pP~v~f~ 76 (214)
.-.+||.+|++.|.+ +++.++++-..|.-.=..+.||-|-|.. |.+++.+|-.||..+|.+...
T Consensus 27 ~wvqrlkeey~sli~------yvqnnk~~d~dwfrlesn~egtrwfgkcwy~hnllkyefdvefdipityp~tapeialp 100 (167)
T KOG3357|consen 27 LWVQRLKEEYQSLIA------YVQNNKSNDNDWFRLESNKEGTRWFGKCWYVHNLLKYEFDVEFDIPITYPTTAPEIALP 100 (167)
T ss_pred HHHHHHHHHHHHHHH------HHHhCcccCCcceEeccCccccceehhhhHhhhhhhheeeeeeccccccCCCCcccccc
Confidence 346899999999965 1222344445565555667788887743 566777899999999999776
Q ss_pred cCCc---eecCCCceeeecCCCCCCCCcCcccHH
Q psy818 77 TPNG---RFKTNTRLCLSMSDFHPDTWNPAWSVS 107 (214)
Q Consensus 77 t~~~---~~h~ng~ic~~~l~~~~e~w~~~~~vn 107 (214)
.-++ ..+-.|.||+. +.+++.+.-|
T Consensus 101 eldgktakmyrggkiclt------~hfkplwarn 128 (167)
T KOG3357|consen 101 ELDGKTAKMYRGGKICLT------DHFKPLWARN 128 (167)
T ss_pred ccCchhhhhhcCceEeec------cccchhhhhc
Confidence 5333 23446899986 4466655544
|
|
| >PF05743 UEV: UEV domain; InterPro: IPR008883 The N-terminal ubiquitin E2 variant (UEV) domain is ~145 amino acid residues in length and shows significant sequence similarity to E2 ubiquitin ligases but is unable to catalyze ubiquitin transfer as it lacks the active site cysteine that forms the transient thioester bond with the C terminus of ubiquitin (Ub) | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0013 Score=47.23 Aligned_cols=74 Identities=22% Similarity=0.546 Sum_probs=45.1
Q ss_pred EEEEECCCCCCCCCcEEE--EEEECCCCCCCCCCeEEEEcC-------CceecCCCceeeecCCCCCCCCcC-cccHHHH
Q psy818 40 FYVVIGPENTQYEGGMYL--GKLVFPRDFPFKPPSIYMITP-------NGRFKTNTRLCLSMSDFHPDTWNP-AWSVSTI 109 (214)
Q Consensus 40 ~~~i~gp~~t~y~gg~f~--~~i~fp~~YP~~pP~v~f~t~-------~~~~h~ng~ic~~~l~~~~e~w~~-~~~vn~~ 109 (214)
-..+.|--.-.|+|..|. +.|-+|.+||..||.+..... +..+.+||.+.++.+ ++|+. ..++..+
T Consensus 32 LL~L~Gtipi~y~g~~y~iPi~Iwlp~~yP~~pP~v~v~pt~~m~I~~~~~Vd~~G~v~~pyL----~~W~~~~s~L~~l 107 (121)
T PF05743_consen 32 LLCLYGTIPITYKGSTYNIPICIWLPENYPYSPPIVYVRPTPSMVIKPSHHVDSNGRVYLPYL----QNWNPPSSNLVDL 107 (121)
T ss_dssp EEEEEEEEEECCTTCCEEEEEEEEE-TTTTTSSSEEEE-GCCTECCGGCCCB-TTSBB-SHHH----HT--TTTS-HHHH
T ss_pred EEEEecCcccccCCcccceeEEEEEcccCCCCCCEEEEeCCCCCCcCCCCeECCCCCEeCchh----ccCCCCCCCHHHH
Confidence 333444222479999986 566699999999999977642 224556788888865 47888 6666666
Q ss_pred HHHHHHhh
Q psy818 110 LTGLLSFM 117 (214)
Q Consensus 110 l~a~~~~m 117 (214)
++.+...+
T Consensus 108 v~~l~~~F 115 (121)
T PF05743_consen 108 VQELQAVF 115 (121)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHHH
Confidence 66666554
|
Nevertheless, at least some UEVs have retained the ability to bind Ub, and appear to act either as cofactors in ubiquitylation reactions, or as ubiquitin sensors. UEV domains also frequently contain other protein recognition motifs, and may generally serve to couple protein and Ub binding functions to facilitate the formation of multiprotein complexes [, , , ]. The UEV domain consists of a twisted four-stranded antiparallel beta-sheet having a meander topology, with four alpha-helices packed against one face of the sheet. The UEV fold is generally similar to canonical E2 ligases in the hydrophobic core and 'active site' regions, but differs significantly at both its N- and C-termini [, ]. The UEV domain is found in the eukaryotic tumour susceptibility gene 101 protein (TSG101). Altered transcripts of this gene have been detected in sporadic breast cancers and many other Homo sapiens malignancies. However, the involvement of this gene in neoplastic transformation and tumourigenesis is still elusive. TSG101 is required for normal cell function of embryonic and adult tissues but this gene is not a tumour suppressor for sporadic forms of breast cancer [].; GO: 0006464 protein modification process, 0015031 protein transport; PDB: 3R3Q_A 3R42_A 1UZX_A 3OBX_A 3OBS_A 3P9H_A 2F0R_A 3P9G_A 3OBQ_A 3OBU_A .... |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00058 Score=61.18 Aligned_cols=105 Identities=6% Similarity=-0.055 Sum_probs=63.0
Q ss_pred CCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhC--cccccccCc
Q psy818 99 TWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELF--PDLVQSISP 164 (214)
Q Consensus 99 ~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~--~~~vn~v~p 164 (214)
+|...+++| ..++.++..+...+ |+++|.++. .| ..|+++..+.+.+. .++. +.+++.|+|
T Consensus 176 d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~-~sk~~~~~~KraaE----~~L~~sGIrvTIVRP 250 (576)
T PLN03209 176 DVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAIL-NLFWGVLCWKRKAE----EALIASGLPYTIVRP 250 (576)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccch-hhHHHHHHHHHHHH----HHHHHcCCCEEEEEC
Confidence 466677777 23455555554433 788887652 23 36777777777666 3333 348999999
Q ss_pred cchhhhhccccCCchhh--HhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 165 GLVKSQIFKSSLGDKFD--KSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 165 g~~~t~~~~~~~~~~~~--~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
|.+.+++.......... .........++++|||++++||++.+.
T Consensus 251 G~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~ 296 (576)
T PLN03209 251 GGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRR 296 (576)
T ss_pred CeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCch
Confidence 99887643211000000 000111224699999999999999764
|
|
| >PF05773 RWD: RWD domain; InterPro: IPR006575 The RWD eukaryotic domain is found in RING finger (IPR001841 from INTERPRO) and WD repeat (IPR001680 from INTERPRO) containing proteins and DEXDc-like helicase (IPR001410 from INTERPRO) subfamily related to the ubiquitin-conjugating enzymes domain (IPR000608 from INTERPRO) | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0024 Score=44.75 Aligned_cols=69 Identities=12% Similarity=0.050 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEEC--CCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 9 TARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIG--PENTQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~g--p~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
..+.+.|+..|+.-.+..+ ......+...+.+.+.. ...+.-....+++.+.||++||..+|.|.+..+
T Consensus 3 ~e~~~~EieaL~sIy~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~p~~YP~~~P~i~l~~~ 73 (113)
T PF05773_consen 3 EEQQEEEIEALQSIYPDDF-IEIESKSPPSLEVKLDESSSSFESSSFPSVTLHFTLPPGYPESPPKISLESP 73 (113)
T ss_dssp HHHHHHHHHHHHHHSSSSE-SSSTSSSSEEEEEEE--CEECCTTTTSEEEEEEEEE-SSTTSS--EEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCc-cccccCCCCceeeeecccccccccccceeEEEEEeCCCcCCCcCCEEEEEcC
Confidence 3467889999988655544 22233445556666632 233445567899999999999999999987764
|
; GO: 0005515 protein binding; PDB: 2EBM_A 2EBK_A 2DAX_A 2DAW_A 2DAY_A 2DMF_A 1UKX_A 2YZ0_A. |
| >smart00591 RWD domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.011 Score=40.89 Aligned_cols=64 Identities=13% Similarity=0.081 Sum_probs=36.9
Q ss_pred HHHHHhcCCCCCeEEeecCCCcccEEEEEECCCC-CCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 15 DYMKLKKDPIPYVIAEPNPANILEWFYVVIGPEN-TQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 15 e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~-t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
|+..|+.-.+..+.....+.+...+.+.+....+ +.-..-.+.+.+.||++||..+|.|.+.+.
T Consensus 1 EieaL~sIy~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~l~~~~p~~YP~~~P~i~~~~~ 65 (107)
T smart00591 1 ELEALESIYPEDFEVIDEDARIPEITIKLSPSSDEGEDQYVSLTLQVKLPENYPDEAPPISLLNS 65 (107)
T ss_pred ChHHHHhhccceeEEecCCCCccEEEEEEecCCCCCCccceEEEEEEECCCCCCCCCCCeEEECC
Confidence 3455555444444333222222244455432211 123445689999999999999999988764
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0081 Score=52.64 Aligned_cols=74 Identities=18% Similarity=0.116 Sum_probs=55.4
Q ss_pred HHHHHHHHHhhccCC--CCCCCCcCc----HHHHHHHHHHHHHhhccCcchhhhCc-ccccccCccchhhhhccccCCch
Q psy818 107 STILTGLLSFMVERS--PTLGSIEMS----DYERRQLAARSLRFNLNDKNFCELFP-DLVQSISPGLVKSQIFKSSLGDK 179 (214)
Q Consensus 107 n~~l~a~~~~m~~~~--v~i~S~a~~----~Y~a~K~a~~~~~~~l~~~~~~e~~~-~~vn~v~pg~~~t~~~~~~~~~~ 179 (214)
...++++++.|...+ ++++|..+. .|+++|+|+.+++++++ .|+.. .++|.|.|+.
T Consensus 103 ~~~~~~~l~~l~~~griv~i~s~~~~~~~~~~~~akaal~gl~rsla----~E~~~gi~v~~i~~~~------------- 165 (450)
T PRK08261 103 YEFFHPVLRSLAPCGRVVVLGRPPEAAADPAAAAAQRALEGFTRSLG----KELRRGATAQLVYVAP------------- 165 (450)
T ss_pred HHHHHHHHHhccCCCEEEEEccccccCCchHHHHHHHHHHHHHHHHH----HHhhcCCEEEEEecCC-------------
Confidence 356777788887665 777877653 79999999999999999 67622 3888886653
Q ss_pred hhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 180 FDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 180 ~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
..++++++++.|++|...
T Consensus 166 -----------~~~~~~~~~~~~l~s~~~ 183 (450)
T PRK08261 166 -----------GAEAGLESTLRFFLSPRS 183 (450)
T ss_pred -----------CCHHHHHHHHHHhcCCcc
Confidence 346788888888888543
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.009 Score=44.40 Aligned_cols=84 Identities=12% Similarity=0.068 Sum_probs=51.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHHHH-HHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhh
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVSTI-LTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFN 145 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn~~-l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~ 145 (214)
+.++|..|... ..+.+.+.++|+..+++|.. ...+...+...+ ++++|..+. .|+++|+++.++.+.
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~ 162 (180)
T smart00822 83 RGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALAAH 162 (180)
T ss_pred eEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHHHH
Confidence 44667554321 23455666788888888822 223333333322 667776543 799999999999988
Q ss_pred ccCcchhhhCcccccccCccchh
Q psy818 146 LNDKNFCELFPDLVQSISPGLVK 168 (214)
Q Consensus 146 l~~~~~~e~~~~~vn~v~pg~~~ 168 (214)
++ .. ..++.++.||.++
T Consensus 163 ~~----~~--~~~~~~~~~g~~~ 179 (180)
T smart00822 163 RR----AR--GLPATSINWGAWA 179 (180)
T ss_pred HH----hc--CCceEEEeecccc
Confidence 76 22 2246777787653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >KOG2391|consensus | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.11 Score=43.34 Aligned_cols=77 Identities=18% Similarity=0.412 Sum_probs=53.8
Q ss_pred CcccEEEEEECCCCCCCCCcEEEEEEE--CCCCCCCCCCeEEEEcC-C------ceecCCCceeeecCCCCCCCCcC-cc
Q psy818 35 NILEWFYVVIGPENTQYEGGMYLGKLV--FPRDFPFKPPSIYMITP-N------GRFKTNTRLCLSMSDFHPDTWNP-AW 104 (214)
Q Consensus 35 ~~~~w~~~i~gp~~t~y~gg~f~~~i~--fp~~YP~~pP~v~f~t~-~------~~~h~ng~ic~~~l~~~~e~w~~-~~ 104 (214)
+++....+|. .+|+|.+|.+-|. +.+.||+.||.+..... + -.+++||.|-++.+ .+|++ ..
T Consensus 51 ~ll~~~GTIp----~~~~G~tYnIPV~iWlldtyP~~pP~c~VnPT~~M~ik~~~hVd~nG~V~LPYL----h~W~~pss 122 (365)
T KOG2391|consen 51 LLLQLDGTIP----VPYQGVTYNIPVIIWLLDTYPYYPPICYVNPTSTMIIKVHEHVDPNGKVYLPYL----HNWDPPSS 122 (365)
T ss_pred chhhccCccc----ccccCCcccceEEEEecccCCCCCCeEEecCCchhhhHHhhccCCCCeEechhh----ccCCCccc
Confidence 4455444444 6899999886655 79999999999966531 1 24567899999987 47884 56
Q ss_pred cHHHHHHHHHHhhcc
Q psy818 105 SVSTILTGLLSFMVE 119 (214)
Q Consensus 105 ~vn~~l~a~~~~m~~ 119 (214)
++-.+++.+...+.+
T Consensus 123 dLv~Liq~l~a~f~~ 137 (365)
T KOG2391|consen 123 DLVGLIQELIAAFSE 137 (365)
T ss_pred hHHHHHHHHHHHhcC
Confidence 666666666665544
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.046 Score=45.79 Aligned_cols=123 Identities=12% Similarity=-0.021 Sum_probs=66.2
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc----HHHHHHHHHHHHHhhccC
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS----DYERRQLAARSLRFNLND 148 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~----~Y~a~K~a~~~~~~~l~~ 148 (214)
.+.++|..|....+..+ .+....+++| ..+..++..+...+ +++||.... .|+++|++...+.+.++.
T Consensus 75 iD~Vih~Ag~~~~~~~~---~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p~~~Y~~sK~~~E~l~~~~~~ 151 (324)
T TIGR03589 75 VDYVVHAAALKQVPAAE---YNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPINLYGATKLASDKLFVAANN 151 (324)
T ss_pred CCEEEECcccCCCchhh---cCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 35677865432112211 1223456676 22333333333333 677776543 799999999999887652
Q ss_pred cchhhhCcccccccCccchhhhhccccCCchhhHhHHhh------------CCCCChHhHHHHHHHHhcCC
Q psy818 149 KNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEA------------HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 149 ~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~------------~~~~~pedvA~~v~fl~s~p 207 (214)
. ..-.+.+++++.||.+..+.. ... .......... ...+.++|+|++++.++...
T Consensus 152 ~--~~~~gi~~~~lR~g~v~G~~~-~~i-~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~ 218 (324)
T TIGR03589 152 I--SGSKGTRFSVVRYGNVVGSRG-SVV-PFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM 218 (324)
T ss_pred h--ccccCcEEEEEeecceeCCCC-CcH-HHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC
Confidence 1 112234888899998765311 000 0000000000 11468999999999988653
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF14462 Prok-E2_E: Prokaryotic E2 family E | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.62 Score=33.36 Aligned_cols=52 Identities=15% Similarity=0.292 Sum_probs=39.7
Q ss_pred CeEEeecCCCcccEEEEEEC--CCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 26 YVIAEPNPANILEWFYVVIG--PENTQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 26 ~~~~~~~~~~~~~w~~~i~g--p~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
|+......+.-..|.+ |.| -+.+.|....-.+.|.+|+.||..+|..-+..|
T Consensus 13 g~~~E~v~eg~~~~li-i~~~~LP~G~y~~~~~dili~iP~gYP~~~~DmfY~~P 66 (122)
T PF14462_consen 13 GLRWETVTEGGRRWLI-IKGYPLPEGKYNHNEVDILILIPPGYPDAPLDMFYVYP 66 (122)
T ss_pred CceEEEEEeCCccEEE-EeCCcCCCCccCccceEEEEECCCCCCCCCCCcEEECC
Confidence 4555555555566766 655 445669999999999999999999998877776
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.81 Score=42.26 Aligned_cols=67 Identities=16% Similarity=0.192 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcE-EEEEEECCCCCCCC-CCeEEEEcC
Q psy818 10 ARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGM-YLGKLVFPRDFPFK-PPSIYMITP 78 (214)
Q Consensus 10 ~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~-f~~~i~fp~~YP~~-pP~v~f~t~ 78 (214)
+-|.+|+.-+-. ..+++.++..+-.-..-.+++.+|-.-- +|-+ .++.|.||.+||.+ ||+++|..+
T Consensus 423 QnLgeE~S~Ig~-k~~nV~fEkidva~Rsctvsln~p~~~~-d~y~flrm~V~FP~nYPn~a~P~Fq~e~~ 491 (1081)
T KOG0309|consen 423 QNLGEEFSLIGV-KIRNVNFEKIDVADRSCTVSLNCPNHRV-DDYIFLRMLVKFPANYPNNAAPSFQFENP 491 (1081)
T ss_pred hhHHhHHhHhhc-cccccceEeeccccceEEEEecCCCCcc-ccceeEEEEEeccccCCCCCCCceEEecC
Confidence 456666666633 2334444433333455666777665443 3333 47889999999996 899999875
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.62 Score=38.71 Aligned_cols=121 Identities=16% Similarity=0.170 Sum_probs=63.2
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-CCCCCCcC-----------------------
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-PTLGSIEM----------------------- 129 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-v~i~S~a~----------------------- 129 (214)
+.++|..|.... ..+.+.|...+++| .+++++.+.+.... +++||.++
T Consensus 79 d~vih~A~~~~~---~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~ 155 (325)
T PLN02989 79 ETVFHTASPVAI---TVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPS 155 (325)
T ss_pred CEEEEeCCCCCC---CCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchh
Confidence 557776553221 22335677777777 45566555442222 56666532
Q ss_pred ------cHHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCC--chhhHhHHhh--------CCCCCh
Q psy818 130 ------SDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLG--DKFDKSLYEA--------HPCLQA 193 (214)
Q Consensus 130 ------~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~--~~~~~~~~~~--------~~~~~p 193 (214)
..|+.+|.+.+.+.+... .+. .-.+..+.|+.+-.+....... .......... ...+..
T Consensus 156 ~~~~~~~~Y~~sK~~~E~~~~~~~----~~~-~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v 230 (325)
T PLN02989 156 FAEERKQWYVLSKTLAEDAAWRFA----KDN-EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDV 230 (325)
T ss_pred HhcccccchHHHHHHHHHHHHHHH----HHc-CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEH
Confidence 149999998887776654 221 2234445555544332211000 0011111111 123468
Q ss_pred HhHHHHHHHHhcCC
Q psy818 194 EDIANTVEFILSSP 207 (214)
Q Consensus 194 edvA~~v~fl~s~p 207 (214)
+|+|++++.++..+
T Consensus 231 ~Dva~a~~~~l~~~ 244 (325)
T PLN02989 231 RDVALAHVKALETP 244 (325)
T ss_pred HHHHHHHHHHhcCc
Confidence 99999999988765
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=90.53 E-value=0.33 Score=40.04 Aligned_cols=105 Identities=10% Similarity=-0.017 Sum_probs=57.5
Q ss_pred CCcCcccHH-----HHHHHHHHhhccCC-CCCCCCcCc-----------------------------HHHHHHHHHHHHH
Q psy818 99 TWNPAWSVS-----TILTGLLSFMVERS-PTLGSIEMS-----------------------------DYERRQLAARSLR 143 (214)
Q Consensus 99 ~w~~~~~vn-----~~l~a~~~~m~~~~-v~i~S~a~~-----------------------------~Y~a~K~a~~~~~ 143 (214)
.|+..+++| .+++++.+.+.-+. |++||.++. .|+.+|...+.+.
T Consensus 95 ~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~ 174 (297)
T PLN02583 95 YDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTA 174 (297)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHH
Confidence 466677777 45666665542122 666665321 3677777776666
Q ss_pred hhccCcchhhhCcccccccCccchhhhhccccCCc-hhhHhHHh--hCCCCChHhHHHHHHHHhcCCC
Q psy818 144 FNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD-KFDKSLYE--AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 144 ~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~-~~~~~~~~--~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.++ .. ....+++++|+.+-.+........ ........ .......+|||++.+.++..|.
T Consensus 175 ~~~~----~~-~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~ 237 (297)
T PLN02583 175 WALA----MD-RGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVS 237 (297)
T ss_pred HHHH----HH-hCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcc
Confidence 5553 22 134778888888765532210000 00000000 1124689999999999987653
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=88.49 E-value=0.59 Score=37.43 Aligned_cols=51 Identities=10% Similarity=0.052 Sum_probs=30.6
Q ss_pred cccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 156 PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 156 ~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.+++.+.||.+.++............. .....++++|||+.++.++..+.
T Consensus 172 gi~~~iirpg~~~~~~~~~~~~~~~~~~--~~~~~i~~~dvA~~~~~~~~~~~ 222 (251)
T PLN00141 172 GINYTIVRPGGLTNDPPTGNIVMEPEDT--LYEGSISRDQVAEVAVEALLCPE 222 (251)
T ss_pred CCcEEEEECCCccCCCCCceEEECCCCc--cccCcccHHHHHHHHHHHhcChh
Confidence 4488889999876553211100000000 01124799999999999998765
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=87.94 E-value=0.34 Score=40.26 Aligned_cols=74 Identities=22% Similarity=0.309 Sum_probs=52.0
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhcc---CC-------CCCCCCcCc----HHHHHHHHHHHHHhhccCcch
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVE---RS-------PTLGSIEMS----DYERRQLAARSLRFNLNDKNF 151 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~---~~-------v~i~S~a~~----~Y~a~K~a~~~~~~~l~~~~~ 151 (214)
++.+++.+.|...++.+ .++++++|+|+. ++ +.+.|.-+. ..+....++.++...|+
T Consensus 108 Pie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~~Lr---- 183 (299)
T PF08643_consen 108 PIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFHSPESIVSSALSSFFTSLR---- 183 (299)
T ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCccCHHHHHHHHHHHHHHHHH----
Confidence 45667778899988877 568999999988 33 344333322 67778889999999999
Q ss_pred hhhCcc--cccccCccchh
Q psy818 152 CELFPD--LVQSISPGLVK 168 (214)
Q Consensus 152 ~e~~~~--~vn~v~pg~~~ 168 (214)
.|+.+. .|..+.-|..+
T Consensus 184 rEl~~~~I~V~~i~LG~l~ 202 (299)
T PF08643_consen 184 RELRPHNIDVTQIKLGNLD 202 (299)
T ss_pred HHhhhcCCceEEEEeeeec
Confidence 666644 55555555544
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >KOG4018|consensus | Back alignment and domain information |
|---|
Probab=87.15 E-value=2.6 Score=33.06 Aligned_cols=66 Identities=11% Similarity=0.080 Sum_probs=40.8
Q ss_pred HHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCC--CCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENT--QYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 11 rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t--~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
-..+|+..|..-.+..+.. ..+.++..+.++|.--.+. -|.| .+.+.+.++.+||.+||-+.+..+
T Consensus 6 eQe~E~EaLeSIY~de~~~-i~~~~~~~f~v~iq~e~~e~d~~~~-~~~l~~s~tEnYPDe~Pli~~~~~ 73 (215)
T KOG4018|consen 6 EQEEELEALESIYPDEFKH-INSEDPPIFEVTIQYEEGENDEPKG-SFILVFSLTENYPDEAPLIEAFEN 73 (215)
T ss_pred HHHHHHHHHHHhccchhhh-hhccCCccceeeeecccccCCCccc-cEEEEEEccCCCCCCCcceecccc
Confidence 3566777777755543311 1233444466666522221 2333 799999999999999999955544
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=86.14 E-value=1.4 Score=37.16 Aligned_cols=72 Identities=11% Similarity=0.040 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhC------cccccccCccchhhhhcc--ccCCchhhHhHHh-----------hCCCC
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELF------PDLVQSISPGLVKSQIFK--SSLGDKFDKSLYE-----------AHPCL 191 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~------~~~vn~v~pg~~~t~~~~--~~~~~~~~~~~~~-----------~~~~~ 191 (214)
.|+++|.+...+.+.++ .+.. ..++..+.|+.+-.+... ...-......... ...++
T Consensus 151 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i 226 (349)
T TIGR02622 151 PYSSSKACAELVIASYR----SSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQ 226 (349)
T ss_pred cchhHHHHHHHHHHHHH----HHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCccccee
Confidence 69999999999988876 3332 236777777765443110 0000000010000 11145
Q ss_pred ChHhHHHHHHHHhcC
Q psy818 192 QAEDIANTVEFILSS 206 (214)
Q Consensus 192 ~pedvA~~v~fl~s~ 206 (214)
..+|+|++++.++..
T Consensus 227 ~v~D~a~a~~~~~~~ 241 (349)
T TIGR02622 227 HVLEPLSGYLLLAEK 241 (349)
T ss_pred eHHHHHHHHHHHHHH
Confidence 788999999887753
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=84.20 E-value=1.2 Score=37.23 Aligned_cols=77 Identities=16% Similarity=0.060 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcc-cccccCccchhhhh---ccc----c-CCchh--h-HhHHhhCCCCChHhHHH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPD-LVQSISPGLVKSQI---FKS----S-LGDKF--D-KSLYEAHPCLQAEDIAN 198 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~---~~~----~-~~~~~--~-~~~~~~~~~~~pedvA~ 198 (214)
.|+.+|.+.+.+.+.++...-...... .+|...|+...+.+ ... . .+... . ........++..+|+|+
T Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~ 240 (340)
T PLN02653 161 PYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVE 240 (340)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHH
Confidence 799999999999888762210111112 45666665322110 000 0 00000 0 00000112468999999
Q ss_pred HHHHHhcCC
Q psy818 199 TVEFILSSP 207 (214)
Q Consensus 199 ~v~fl~s~p 207 (214)
+++.++...
T Consensus 241 a~~~~~~~~ 249 (340)
T PLN02653 241 AMWLMLQQE 249 (340)
T ss_pred HHHHHHhcC
Confidence 999998764
|
|
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=81.94 E-value=1.2 Score=33.79 Aligned_cols=43 Identities=21% Similarity=0.234 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhcccc
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS 175 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~ 175 (214)
.|+.+|+|+..++++|+.+ ..-.|. .+-+|.|-..+|+|.++.
T Consensus 142 GYGMAKaAVHqLt~SLaak--~SGlP~gsaa~~ilPVTLDTPMNRKw 186 (236)
T KOG4022|consen 142 GYGMAKAAVHQLTSSLAAK--DSGLPDGSAALTILPVTLDTPMNRKW 186 (236)
T ss_pred chhHHHHHHHHHHHHhccc--ccCCCCCceeEEEeeeeccCcccccc
Confidence 8999999999999999866 333343 677788988899987654
|
|
| >PF14457 Prok-E2_A: Prokaryotic E2 family A | Back alignment and domain information |
|---|
Probab=81.57 E-value=1.9 Score=32.59 Aligned_cols=59 Identities=25% Similarity=0.524 Sum_probs=41.4
Q ss_pred EEEECCCCCCCCCCeEEEEcCC---ceecCC-------CceeeecCCCCCCCCcCcccHHHHHHHHHHhhc
Q psy818 58 GKLVFPRDFPFKPPSIYMITPN---GRFKTN-------TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMV 118 (214)
Q Consensus 58 ~~i~fp~~YP~~pP~v~f~t~~---~~~h~n-------g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~ 118 (214)
+.|.|+.+||..+|.|.++.++ ..-|.| ...|+.- .+..+|.+...+..++..+...+.
T Consensus 57 ~~i~~~~~~~~~~P~v~~lR~dFP~~lpH~~~~~~~~p~~lCl~~--~~~~e~~~~~g~~~~l~rl~~Wl~ 125 (162)
T PF14457_consen 57 VAIVFPPDSPLSAPEVPALRKDFPGNLPHQNPGPEGEPVSLCLYE--GPWSEWRPSWGPEGFLDRLFDWLR 125 (162)
T ss_pred EEEEecCCCCCCCccchhhHhhCCCCCCccCCCCCCCCccceEec--CCHHHhhhccCHHHHHHHHHHHHH
Confidence 6789999999999987777632 123444 2457653 334678899998888777777764
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=81.48 E-value=0.54 Score=40.56 Aligned_cols=37 Identities=14% Similarity=-0.046 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhc
Q psy818 132 YERRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIF 172 (214)
Q Consensus 132 Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~ 172 (214)
-+++|+++++-++.|+ .++++. |+|++..|.+.|.-.
T Consensus 240 mG~AKa~LE~~~r~La----~~L~~~giran~i~~g~~~T~As 278 (398)
T PRK13656 240 IGKAKKDLDRTALALN----EKLAAKGGDAYVSVLKAVVTQAS 278 (398)
T ss_pred HHHHHHHHHHHHHHHH----HHhhhcCCEEEEEecCcccchhh
Confidence 4799999999999999 777765 999999999988644
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 214 | ||||
| 2f4w_A | 187 | Human Ubiquitin-Conjugating Enzyme E2 J2 Length = 1 | 3e-71 | ||
| 3oj4_A | 153 | Crystal Structure Of The A20 Znf4, Ubiquitin And Ub | 1e-13 | ||
| 2yho_B | 149 | The Idol-Ube2d Complex Mediates Sterol-Dependent De | 1e-13 | ||
| 2c4p_A | 165 | Crystal Structure Of Human Ubiquitin-Conjugating En | 1e-13 | ||
| 1y6l_A | 149 | Human Ubiquitin Conjugating Enzyme E2e2 Length = 14 | 2e-13 | ||
| 4ii2_C | 163 | Crystal Structure Of Ubiquitin Activating Enzyme 1 | 3e-13 | ||
| 2oxq_A | 152 | Structure Of The Ubch5 :chip U-Box Complex Length = | 3e-13 | ||
| 2ayv_A | 166 | Crystal Structure Of A Putative Ubiquitin-Conjugati | 5e-13 | ||
| 2aak_A | 152 | Ubiquitin Conjugating Enzyme From Arabidopsis Thali | 7e-13 | ||
| 1jas_A | 152 | Hsubc2b Length = 152 | 9e-13 | ||
| 1ayz_A | 169 | Crystal Structure Of The Saccharomyces Cerevisiae U | 1e-12 | ||
| 3bzh_A | 194 | Crystal Structure Of Human Ubiquitin-Conjugating En | 1e-12 | ||
| 4ap4_B | 153 | Rnf4 - Ubch5a - Ubiquitin Heterotrimeric Complex Le | 1e-12 | ||
| 1z2u_A | 150 | The 1.1a Crystallographic Structure Of Ubiquitin- C | 2e-12 | ||
| 1q34_A | 163 | Crystal Structures Of Two Ubc (E2) Enzymes Of The U | 2e-12 | ||
| 1z3d_A | 157 | Protein Crystal Growth Improvement Leading To The 2 | 2e-12 | ||
| 3l1y_A | 157 | Crystal Structure Of Human Ubc4 E2 Conjugating Enzy | 4e-12 | ||
| 1qcq_A | 148 | Ubiquitin Conjugating Enzyme Length = 148 | 4e-12 | ||
| 3eb6_B | 149 | Structure Of The Ciap2 Ring Domain Bound To Ubch5b | 5e-12 | ||
| 2esk_A | 149 | Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b, Wil | 5e-12 | ||
| 3tgd_A | 152 | Crystal Structure Of The Human Ubiquitin-Conjugatin | 6e-12 | ||
| 1ur6_A | 147 | Nmr Based Structural Model Of The Ubch5b-Cnot4 Comp | 6e-12 | ||
| 2c4o_B | 165 | Crystal Structure Of Human Ubiquitin-Conjugating En | 6e-12 | ||
| 2esq_A | 149 | Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Muta | 7e-12 | ||
| 2esp_A | 149 | Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Muta | 9e-12 | ||
| 3rpg_A | 149 | Bmi1RING1B-Ubch5c Complex Structure Length = 149 | 1e-11 | ||
| 2eso_A | 149 | Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Muta | 1e-11 | ||
| 3l1z_A | 157 | Crystal Structure Of The U-Box Domain Of Human E4b | 1e-11 | ||
| 2fuh_A | 146 | Solution Structure Of The Ubch5cUB NON-Covalent Com | 1e-11 | ||
| 1x23_A | 155 | Crystal Structure Of Ubch5c Length = 155 | 1e-11 | ||
| 4gpr_A | 151 | Crystal Structure Of Ehubc5, A Ubiquitin Conjugatin | 2e-11 | ||
| 3jvz_A | 146 | E2~ubiquitin-Hect Length = 146 | 2e-11 | ||
| 4ddg_A | 399 | Crystal Structure Of Human Otub1UBCH5B~UBUB Length | 2e-11 | ||
| 3a33_A | 150 | Ubch5b~ubiquitin Conjugate Length = 150 | 3e-11 | ||
| 4auq_A | 147 | Structure Of Birc7-Ubch5b-Ub Complex. Length = 147 | 4e-11 | ||
| 3ugb_A | 147 | Ubch5c~ubiquitin Conjugate Length = 147 | 7e-11 | ||
| 2c4o_A | 165 | Crystal Structure Of Human Ubiquitin-Conjugating En | 1e-10 | ||
| 3e95_A | 151 | Crystal Structure Of The Plasmodium Falciparum Ubiq | 1e-10 | ||
| 2r0j_A | 149 | Crystal Structure Of The Putative Ubiquitin Conjuga | 1e-10 | ||
| 3hct_B | 155 | Crystal Structure Of Traf6 In Complex With Ubc13 In | 2e-10 | ||
| 3fsh_A | 168 | Crystal Structure Of The Ubiquitin Conjugating Enzy | 2e-10 | ||
| 2kly_A | 167 | Solution Structure Of Human Ubiquitin Conjugating E | 2e-10 | ||
| 2e2c_A | 156 | E2-C, An Ubiquitin Conjugating Enzyme Required For | 3e-10 | ||
| 2pwq_A | 216 | Crystal Structure Of A Putative Ubiquitin Conjugati | 4e-10 | ||
| 4epo_B | 155 | Crystal Structure Of Rnf8 Bound To The Ubc13MMS2 HE | 4e-10 | ||
| 3h8k_A | 164 | Crystal Structure Of Ube2g2 Complxed With The G2br | 4e-10 | ||
| 2c2v_B | 154 | Crystal Structure Of The Chip-Ubc13-Uev1a Complex L | 4e-10 | ||
| 2cyx_A | 170 | Structure Of Human Ubiquitin-Conjugating Enzyme E2 | 4e-10 | ||
| 1j7d_B | 152 | Crystal Structure Of Hmms2-Hubc13 Length = 152 | 4e-10 | ||
| 3von_C | 148 | Crystalstructure Of The Ubiquitin Protease Length = | 6e-10 | ||
| 1jat_A | 155 | Mms2UBC13 UBIQUITIN CONJUGATING ENZYME COMPLEX Leng | 6e-10 | ||
| 1jbb_A | 153 | Ubiquitin Conjugating Enzyme, Ubc13 Length = 153 | 7e-10 | ||
| 2ucz_A | 165 | Ubiquitin Conjugating Enzyme (Ubc7) From Saccharomy | 7e-10 | ||
| 2h2y_A | 136 | Crystal Structure Of Ubiquitin Conjugating Enzyme E | 1e-09 | ||
| 1yh2_A | 169 | Ubiquitin-Conjugating Enzyme Hspc150 Length = 169 | 1e-09 | ||
| 2fo3_A | 125 | Plasmodium Vivax Ubiquitin Conjugating Enzyme E2 Le | 2e-09 | ||
| 2gmi_A | 152 | Mms2UBC13~UBIQUITIN Length = 152 | 6e-09 | ||
| 4fh1_A | 153 | S. Cerevisiae Ubc13-N79a Length = 153 | 8e-09 | ||
| 2awf_A | 172 | Structure Of Human Ubiquitin-Conjugating Enzyme E2 | 2e-08 | ||
| 2ob4_A | 180 | Human Ubiquitin-Conjugating Enzyme Cdc34 Length = 1 | 3e-08 | ||
| 3rz3_A | 183 | Human Cdc34 E2 In Complex With Cc0651 Inhibitor Len | 3e-08 | ||
| 1pzv_A | 164 | Crystal Structures Of Two Ubc (E2) Enzymes Of The U | 3e-08 | ||
| 2f4z_A | 193 | Toxoplasma Gondii Ubiquitin Conjugating Enzyme Tgtw | 4e-07 | ||
| 1i7k_A | 179 | Crystal Structure Of Human Mitotic-Specific Ubiquit | 6e-07 | ||
| 2grp_A | 161 | Crystal Structure Of Human Rangap1-Ubc9-Y87a Length | 1e-06 | ||
| 2gro_A | 161 | Crystal Structure Of Human Rangap1-Ubc9-N85q Length | 1e-06 | ||
| 1zdn_A | 158 | Ubiquitin-Conjugating Enzyme E2s Length = 158 | 2e-06 | ||
| 2grr_A | 161 | Crystal Structure Of Human Rangap1-Ubc9-D127s Lengt | 2e-06 | ||
| 1kps_A | 159 | Structural Basis For E2-Mediated Sumo Conjugation R | 2e-06 | ||
| 2grn_A | 161 | Crystal Structure Of Human Rangap1-Ubc9 Length = 16 | 2e-06 | ||
| 2grq_A | 161 | Crystal Structure Of Human Rangap1-Ubc9-D127a Lengt | 2e-06 | ||
| 2o25_C | 160 | Ubiquitin-Conjugating Enzyme E2-25 Kda Complexed Wi | 2e-06 | ||
| 1u9a_A | 160 | Human Ubiquitin-Conjugating Enzyme Ubc9 Length = 16 | 2e-06 | ||
| 3a4s_A | 163 | The Crystal Structure Of The Sld2:ubc9 Complex Leng | 2e-06 | ||
| 1z5s_A | 158 | Crystal Structure Of A Complex Between Ubc9, Sumo-1 | 3e-06 | ||
| 1yrv_A | 169 | Novel Ubiquitin-Conjugating Enzyme Length = 169 | 5e-06 | ||
| 2uyz_A | 158 | Non-Covalent Complex Between Ubc9 And Sumo1 Length | 1e-05 | ||
| 3sqv_C | 156 | Crystal Structure Of E. Coli O157:h7 E3 Ubiquitin L | 1e-05 | ||
| 1c4z_D | 154 | Structure Of E6ap: Insights Into Ubiquitination Pat | 1e-05 | ||
| 1fxt_A | 149 | Structure Of A Conjugating Enzyme-Ubiquitin Thioles | 1e-05 | ||
| 1tte_A | 215 | The Structure Of A Class Ii Ubiquitin-Conjugating E | 2e-05 | ||
| 3uio_A | 158 | Complex Between Human Rangap1-Sumo2, Ubc9 And The I | 5e-05 | ||
| 3rcz_B | 163 | Rad60 Sld2 Ubc9 Complex Length = 163 | 5e-05 | ||
| 1yf9_A | 171 | Structural Analysis Of Leishmania Major Ubiquitin C | 6e-05 | ||
| 1xg5_A | 279 | Structure Of Human Putative Dehydrogenase Mgc4172 I | 6e-05 | ||
| 2gjd_A | 157 | Distinct Functional Domains Of Ubc9 Dictate Cell Su | 8e-05 | ||
| 3ong_B | 159 | Crystal Structure Of Uba2ufd-ubc9: Insights Into E1 | 9e-05 | ||
| 3e46_A | 253 | Crystal Structure Of Ubiquitin-Conjugating Enzyme E | 1e-04 | ||
| 1wzv_A | 155 | Crystal Structure Of Ubch8 Length = 155 | 1e-04 | ||
| 2kjh_A | 152 | Nmr Based Structural Model Of The Ubch8-Ubiquitin C | 1e-04 | ||
| 3k9p_A | 217 | The Crystal Structure Of E2-25k And Ubiquitin Compl | 1e-04 | ||
| 1yla_A | 202 | Ubiquitin-Conjugating Enzyme E2-25 Kda (Huntington | 2e-04 | ||
| 3k9o_A | 201 | The Crystal Structure Of E2-25k And Ubb+1 Complex L | 2e-04 | ||
| 2bep_A | 159 | Crystal Structure Of Ubiquitin Conjugating Enzyme E | 2e-04 | ||
| 2a7l_A | 136 | Structure Of The Human Hypothetical Ubiquitin-Conju | 2e-04 | ||
| 3o2u_A | 190 | S. Cerevisiae Ubc12 Length = 190 | 3e-04 | ||
| 2y9o_A | 172 | Pex4p-Pex22p Mutant I Structure Length = 172 | 4e-04 | ||
| 2y9p_A | 172 | Pex4p-Pex22p Mutant Ii Structure Length = 172 | 6e-04 | ||
| 2y9m_A | 172 | Pex4p-Pex22p Structure Length = 172 | 6e-04 | ||
| 3ceg_A | 323 | Crystal Structure Of The Ubc Domain Of Baculoviral | 8e-04 |
| >pdb|2F4W|A Chain A, Human Ubiquitin-Conjugating Enzyme E2 J2 Length = 187 | Back alignment and structure |
|
| >pdb|3OJ4|A Chain A, Crystal Structure Of The A20 Znf4, Ubiquitin And Ubch5a Complex Length = 153 | Back alignment and structure |
|
| >pdb|2YHO|B Chain B, The Idol-Ube2d Complex Mediates Sterol-Dependent Degradation Of The Ldl Receptor Length = 149 | Back alignment and structure |
|
| >pdb|2C4P|A Chain A, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme Ubch5a Length = 165 | Back alignment and structure |
|
| >pdb|1Y6L|A Chain A, Human Ubiquitin Conjugating Enzyme E2e2 Length = 149 | Back alignment and structure |
|
| >pdb|4II2|C Chain C, Crystal Structure Of Ubiquitin Activating Enzyme 1 (uba1) In Complex With The Ub E2 Ubc4, Ubiquitin, And Atp/mg Length = 163 | Back alignment and structure |
|
| >pdb|2OXQ|A Chain A, Structure Of The Ubch5 :chip U-Box Complex Length = 152 | Back alignment and structure |
|
| >pdb|2AYV|A Chain A, Crystal Structure Of A Putative Ubiquitin-Conjugating Enzyme E2 From Toxoplasma Gondii Length = 166 | Back alignment and structure |
|
| >pdb|2AAK|A Chain A, Ubiquitin Conjugating Enzyme From Arabidopsis Thaliana Length = 152 | Back alignment and structure |
|
| >pdb|1JAS|A Chain A, Hsubc2b Length = 152 | Back alignment and structure |
|
| >pdb|1AYZ|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Ubiquitin- Conjugating Enzyme Rad6 (Ubc2) At 2.6a Resolution Length = 169 | Back alignment and structure |
|
| >pdb|3BZH|A Chain A, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme E2 E1 Length = 194 | Back alignment and structure |
|
| >pdb|4AP4|B Chain B, Rnf4 - Ubch5a - Ubiquitin Heterotrimeric Complex Length = 153 | Back alignment and structure |
|
| >pdb|1Z2U|A Chain A, The 1.1a Crystallographic Structure Of Ubiquitin- Conjugating Enzyme (Ubc-2) From Caenorhabditis Elegans: Functional And Evolutionary Significance Length = 150 | Back alignment and structure |
|
| >pdb|1Q34|A Chain A, Crystal Structures Of Two Ubc (E2) Enzymes Of The Ubiquitin- Conjugating System In Caenorhabditis Elegans Length = 163 | Back alignment and structure |
|
| >pdb|1Z3D|A Chain A, Protein Crystal Growth Improvement Leading To The 2.5a Crystallographic Structure Of Ubiquitin-Conjugating Enzyme (Ubc-1) From Caenorhabditis Elegans Length = 157 | Back alignment and structure |
|
| >pdb|3L1Y|A Chain A, Crystal Structure Of Human Ubc4 E2 Conjugating Enzyme Length = 157 | Back alignment and structure |
|
| >pdb|1QCQ|A Chain A, Ubiquitin Conjugating Enzyme Length = 148 | Back alignment and structure |
|
| >pdb|3EB6|B Chain B, Structure Of The Ciap2 Ring Domain Bound To Ubch5b Length = 149 | Back alignment and structure |
|
| >pdb|2ESK|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b, Wild-Type Length = 149 | Back alignment and structure |
|
| >pdb|3TGD|A Chain A, Crystal Structure Of The Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Length = 152 | Back alignment and structure |
|
| >pdb|1UR6|A Chain A, Nmr Based Structural Model Of The Ubch5b-Cnot4 Complex Length = 147 | Back alignment and structure |
|
| >pdb|2C4O|B Chain B, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme Ubch5b Length = 165 | Back alignment and structure |
|
| >pdb|2ESQ|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Mutant Ser94gly Length = 149 | Back alignment and structure |
|
| >pdb|2ESP|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Mutant Ile88ala Length = 149 | Back alignment and structure |
|
| >pdb|3RPG|A Chain A, Bmi1RING1B-Ubch5c Complex Structure Length = 149 | Back alignment and structure |
|
| >pdb|2ESO|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Mutant Ile37ala Length = 149 | Back alignment and structure |
|
| >pdb|3L1Z|A Chain A, Crystal Structure Of The U-Box Domain Of Human E4b Ubiquitin Ligase In Complex With Ubch5c E2 Ubiquitin Conjugating Enzyme Length = 157 | Back alignment and structure |
|
| >pdb|2FUH|A Chain A, Solution Structure Of The Ubch5cUB NON-Covalent Complex Length = 146 | Back alignment and structure |
|
| >pdb|1X23|A Chain A, Crystal Structure Of Ubch5c Length = 155 | Back alignment and structure |
|
| >pdb|4GPR|A Chain A, Crystal Structure Of Ehubc5, A Ubiquitin Conjugating Enzyme From Entamoeba Histolytica Length = 151 | Back alignment and structure |
|
| >pdb|3JVZ|A Chain A, E2~ubiquitin-Hect Length = 146 | Back alignment and structure |
|
| >pdb|4DDG|A Chain A, Crystal Structure Of Human Otub1UBCH5B~UBUB Length = 399 | Back alignment and structure |
|
| >pdb|3A33|A Chain A, Ubch5b~ubiquitin Conjugate Length = 150 | Back alignment and structure |
|
| >pdb|4AUQ|A Chain A, Structure Of Birc7-Ubch5b-Ub Complex. Length = 147 | Back alignment and structure |
|
| >pdb|3UGB|A Chain A, Ubch5c~ubiquitin Conjugate Length = 147 | Back alignment and structure |
|
| >pdb|2C4O|A Chain A, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme Ubch5b Length = 165 | Back alignment and structure |
|
| >pdb|3E95|A Chain A, Crystal Structure Of The Plasmodium Falciparum Ubiquitin Conjugating Enzyme Complex, Pfubc13-Pfuev1a Length = 151 | Back alignment and structure |
|
| >pdb|2R0J|A Chain A, Crystal Structure Of The Putative Ubiquitin Conjugating Enzyme, Pfe1350c, From Plasmodium Falciparum Length = 149 | Back alignment and structure |
|
| >pdb|3HCT|B Chain B, Crystal Structure Of Traf6 In Complex With Ubc13 In The P1 Space Group Length = 155 | Back alignment and structure |
|
| >pdb|3FSH|A Chain A, Crystal Structure Of The Ubiquitin Conjugating Enzyme Ube2g2 Bound To The G2br Domain Of Ubiquitin Ligase Gp78 Length = 168 | Back alignment and structure |
|
| >pdb|2KLY|A Chain A, Solution Structure Of Human Ubiquitin Conjugating Enzyme Ube2g2 Length = 167 | Back alignment and structure |
|
| >pdb|2E2C|A Chain A, E2-C, An Ubiquitin Conjugating Enzyme Required For The Destruction Of Mitotic Cyclins Length = 156 | Back alignment and structure |
|
| >pdb|2PWQ|A Chain A, Crystal Structure Of A Putative Ubiquitin Conjugating Enzyme From Plasmodium Yoelii Length = 216 | Back alignment and structure |
|
| >pdb|4EPO|B Chain B, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2 HETERODIMER Length = 155 | Back alignment and structure |
|
| >pdb|3H8K|A Chain A, Crystal Structure Of Ube2g2 Complxed With The G2br Domain Of Gp78 At 1.8-A Resolution Length = 164 | Back alignment and structure |
|
| >pdb|2C2V|B Chain B, Crystal Structure Of The Chip-Ubc13-Uev1a Complex Length = 154 | Back alignment and structure |
|
| >pdb|2CYX|A Chain A, Structure Of Human Ubiquitin-Conjugating Enzyme E2 G2 (Ube2g2UBC7) Length = 170 | Back alignment and structure |
|
| >pdb|1J7D|B Chain B, Crystal Structure Of Hmms2-Hubc13 Length = 152 | Back alignment and structure |
|
| >pdb|3VON|C Chain C, Crystalstructure Of The Ubiquitin Protease Length = 148 | Back alignment and structure |
|
| >pdb|1JAT|A Chain A, Mms2UBC13 UBIQUITIN CONJUGATING ENZYME COMPLEX Length = 155 | Back alignment and structure |
|
| >pdb|1JBB|A Chain A, Ubiquitin Conjugating Enzyme, Ubc13 Length = 153 | Back alignment and structure |
|
| >pdb|2UCZ|A Chain A, Ubiquitin Conjugating Enzyme (Ubc7) From Saccharomyces Cerevisiae Length = 165 | Back alignment and structure |
|
| >pdb|2H2Y|A Chain A, Crystal Structure Of Ubiquitin Conjugating Enzyme E2 From Plasmodium Falciparum Length = 136 | Back alignment and structure |
|
| >pdb|1YH2|A Chain A, Ubiquitin-Conjugating Enzyme Hspc150 Length = 169 | Back alignment and structure |
|
| >pdb|2FO3|A Chain A, Plasmodium Vivax Ubiquitin Conjugating Enzyme E2 Length = 125 | Back alignment and structure |
|
| >pdb|2GMI|A Chain A, Mms2UBC13~UBIQUITIN Length = 152 | Back alignment and structure |
|
| >pdb|4FH1|A Chain A, S. Cerevisiae Ubc13-N79a Length = 153 | Back alignment and structure |
|
| >pdb|2AWF|A Chain A, Structure Of Human Ubiquitin-Conjugating Enzyme E2 G1 Length = 172 | Back alignment and structure |
|
| >pdb|2OB4|A Chain A, Human Ubiquitin-Conjugating Enzyme Cdc34 Length = 180 | Back alignment and structure |
|
| >pdb|3RZ3|A Chain A, Human Cdc34 E2 In Complex With Cc0651 Inhibitor Length = 183 | Back alignment and structure |
|
| >pdb|1PZV|A Chain A, Crystal Structures Of Two Ubc (E2) Enzymes Of The Ubiquitin- Conjugating System In Caenorhabditis Elegans Length = 164 | Back alignment and structure |
|
| >pdb|2F4Z|A Chain A, Toxoplasma Gondii Ubiquitin Conjugating Enzyme Tgtwinscan_2721- E2 Domain Length = 193 | Back alignment and structure |
|
| >pdb|1I7K|A Chain A, Crystal Structure Of Human Mitotic-Specific Ubiquitin- Conjugating Enzyme, Ubch10 Length = 179 | Back alignment and structure |
|
| >pdb|2GRP|A Chain A, Crystal Structure Of Human Rangap1-Ubc9-Y87a Length = 161 | Back alignment and structure |
|
| >pdb|2GRO|A Chain A, Crystal Structure Of Human Rangap1-Ubc9-N85q Length = 161 | Back alignment and structure |
|
| >pdb|1ZDN|A Chain A, Ubiquitin-Conjugating Enzyme E2s Length = 158 | Back alignment and structure |
|
| >pdb|2GRR|A Chain A, Crystal Structure Of Human Rangap1-Ubc9-D127s Length = 161 | Back alignment and structure |
|
| >pdb|1KPS|A Chain A, Structural Basis For E2-Mediated Sumo Conjugation Revealed By A Complex Between Ubiquitin Conjugating Enzyme Ubc9 And Rangap1 Length = 159 | Back alignment and structure |
|
| >pdb|2GRN|A Chain A, Crystal Structure Of Human Rangap1-Ubc9 Length = 161 | Back alignment and structure |
|
| >pdb|2GRQ|A Chain A, Crystal Structure Of Human Rangap1-Ubc9-D127a Length = 161 | Back alignment and structure |
|
| >pdb|2O25|C Chain C, Ubiquitin-Conjugating Enzyme E2-25 Kda Complexed With Sumo-1- Conjugating Enzyme Ubc9 Length = 160 | Back alignment and structure |
|
| >pdb|1U9A|A Chain A, Human Ubiquitin-Conjugating Enzyme Ubc9 Length = 160 | Back alignment and structure |
|
| >pdb|3A4S|A Chain A, The Crystal Structure Of The Sld2:ubc9 Complex Length = 163 | Back alignment and structure |
|
| >pdb|1Z5S|A Chain A, Crystal Structure Of A Complex Between Ubc9, Sumo-1, Rangap1 And Nup358RANBP2 Length = 158 | Back alignment and structure |
|
| >pdb|1YRV|A Chain A, Novel Ubiquitin-Conjugating Enzyme Length = 169 | Back alignment and structure |
|
| >pdb|2UYZ|A Chain A, Non-Covalent Complex Between Ubc9 And Sumo1 Length = 158 | Back alignment and structure |
|
| >pdb|3SQV|C Chain C, Crystal Structure Of E. Coli O157:h7 E3 Ubiquitin Ligase, Nlel, With A Human E2, Ubch7 Length = 156 | Back alignment and structure |
|
| >pdb|1C4Z|D Chain D, Structure Of E6ap: Insights Into Ubiquitination Pathway Length = 154 | Back alignment and structure |
|
| >pdb|1FXT|A Chain A, Structure Of A Conjugating Enzyme-Ubiquitin Thiolester Complex Length = 149 | Back alignment and structure |
|
| >pdb|1TTE|A Chain A, The Structure Of A Class Ii Ubiquitin-Conjugating Enzyme, Ubc1 Length = 215 | Back alignment and structure |
|
| >pdb|3UIO|A Chain A, Complex Between Human Rangap1-Sumo2, Ubc9 And The Ir1 Domain From Ranbp2 Containing Ir2 Motif Ii Length = 158 | Back alignment and structure |
|
| >pdb|3RCZ|B Chain B, Rad60 Sld2 Ubc9 Complex Length = 163 | Back alignment and structure |
|
| >pdb|1YF9|A Chain A, Structural Analysis Of Leishmania Major Ubiquitin Conjugating Enzyme E2 Length = 171 | Back alignment and structure |
|
| >pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279 | Back alignment and structure |
|
| >pdb|2GJD|A Chain A, Distinct Functional Domains Of Ubc9 Dictate Cell Survival And Resistance To Genotoxic Stress Length = 157 | Back alignment and structure |
|
| >pdb|3ONG|B Chain B, Crystal Structure Of Uba2ufd-ubc9: Insights Into E1-e2 Interactions In Sumo Pathways Length = 159 | Back alignment and structure |
|
| >pdb|3E46|A Chain A, Crystal Structure Of Ubiquitin-Conjugating Enzyme E2-25kda (Huntington Interacting Protein 2) M172a Mutant Length = 253 | Back alignment and structure |
|
| >pdb|1WZV|A Chain A, Crystal Structure Of Ubch8 Length = 155 | Back alignment and structure |
|
| >pdb|2KJH|A Chain A, Nmr Based Structural Model Of The Ubch8-Ubiquitin Complex Length = 152 | Back alignment and structure |
|
| >pdb|3K9P|A Chain A, The Crystal Structure Of E2-25k And Ubiquitin Complex Length = 217 | Back alignment and structure |
|
| >pdb|1YLA|A Chain A, Ubiquitin-Conjugating Enzyme E2-25 Kda (Huntington Interacting Protein 2) Length = 202 | Back alignment and structure |
|
| >pdb|3K9O|A Chain A, The Crystal Structure Of E2-25k And Ubb+1 Complex Length = 201 | Back alignment and structure |
|
| >pdb|2BEP|A Chain A, Crystal Structure Of Ubiquitin Conjugating Enzyme E2-25k Length = 159 | Back alignment and structure |
|
| >pdb|2A7L|A Chain A, Structure Of The Human Hypothetical Ubiquitin-Conjugating Enzyme, Loc55284 Length = 136 | Back alignment and structure |
|
| >pdb|3O2U|A Chain A, S. Cerevisiae Ubc12 Length = 190 | Back alignment and structure |
|
| >pdb|2Y9O|A Chain A, Pex4p-Pex22p Mutant I Structure Length = 172 | Back alignment and structure |
|
| >pdb|2Y9P|A Chain A, Pex4p-Pex22p Mutant Ii Structure Length = 172 | Back alignment and structure |
|
| >pdb|2Y9M|A Chain A, Pex4p-Pex22p Structure Length = 172 | Back alignment and structure |
|
| >pdb|3CEG|A Chain A, Crystal Structure Of The Ubc Domain Of Baculoviral Iap Repeat- Containing Protein 6 Length = 323 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1 Length = 187 | Back alignment and structure |
|---|
Score = 218 bits (558), Expect = 4e-73
Identities = 120/163 (73%), Positives = 137/163 (84%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 15 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 74
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 75 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 134
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQ 170
E SD+ +RQLA +SL FNL DK FCELFP++V+ I
Sbjct: 135 ETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQKAQD 177
|
| >1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 Length = 169 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-27
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
MS+ A RL +D+ ++K+D P V A P P N++ W ++IGP +T YE G + L
Sbjct: 1 MSTP---ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLL 57
Query: 61 VFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSF 116
F ++P KPP + ++ PN N +CL + + W P + V++ILT + S
Sbjct: 58 EFDEEYPNKPPHVKFLSEMFHPN--VYANGEICLDILQ---NRWTPTYDVASILTSIQSL 112
Query: 117 MVE 119
+
Sbjct: 113 FND 115
|
| >2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A Length = 152 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-27
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
MS+ A RL +D+ +L++DP + P NI+ W V+ GP++T ++GG + L
Sbjct: 1 MST---PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSL 57
Query: 61 VFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSF 116
F D+P KPP++ ++ PN + +CL D + W+P + V+ ILT + S
Sbjct: 58 QFSEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSL 112
Query: 117 MVE 119
+ +
Sbjct: 113 LCD 115
|
| >2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1 Length = 156 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 4e-27
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
S + + RL+Q+ L P + A P+ N+ +W + GP++T YE Y L
Sbjct: 4 SKERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLE 63
Query: 62 FPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
FP D+P+KPP + T PN + +CL D + W ++ V TIL L S +
Sbjct: 64 FPSDYPYKPPVVKFTTPCWHPN--VDQSGNICL---DILKENWTASYDVRTILLSLQSLL 118
Query: 118 VE 119
E
Sbjct: 119 GE 120
|
| >2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7} Length = 136 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 6e-27
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R++++ K+P + +P+NI W +G ENT Y +Y K++FP ++P
Sbjct: 21 ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYP 80
Query: 68 FKPPSIYMIT-----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
KPP +Y + + +N +CLS+ D +NP+ S+S ++ ++S +
Sbjct: 81 LKPPIVYFLQKPPKHTH--VYSNGDICLSVLG---DDYNPSLSISGLILSIISMLSS 132
|
| >1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1 Length = 169 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 6e-27
Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
S H A L +D+ LK++ + A+P +++EW + G +N+ ++G ++ +
Sbjct: 17 RGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTI 76
Query: 61 VFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSF 116
F ++ + PP + IT PN + C+ D +P+ WN +++S+IL L
Sbjct: 77 HFTSEYNYAPPVVKFITIPFHPN-VDPHTGQPCIDFLD-NPEKWNTNYTLSSILLALQVM 134
Query: 117 MVE 119
+
Sbjct: 135 LSN 137
|
| >2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1 Length = 125 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 4e-26
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M + A R++++ +P + +P NI W +G ENT Y +Y K+
Sbjct: 4 MGN----ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKI 59
Query: 61 VFPRDFPFKPPSIYMIT-----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLS 115
+FP D+P KPP +Y + + +N +CLS+ D +NP+ S+S ++ ++S
Sbjct: 60 IFPDDYPLKPPIVYFLQKPPKHTH--VYSNGDICLSLLG---DDYNPSLSISGLVLSIIS 114
Query: 116 FMVE 119
+
Sbjct: 115 MLSS 118
|
| >2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 5e-26
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
G R+ ++ +L +P+P + AEP+ +N + V+ GP+++ +EGG + +L P ++
Sbjct: 5 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEY 64
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
P P + +T PN R+CL D D W+PA + T+L + + + +P
Sbjct: 65 PMAAPKVRFMTKIYHPN--VDKLGRICL---DILKDKWSPALQIRTVLLSIQALLSAPNP 119
|
| >1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1 Length = 179 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 6e-26
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
RL+Q+ M L + A P N+ +W + G T YE Y L FP +
Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGY 89
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
P+ P++ +T PN T + L D + W+ + V TIL + S + E
Sbjct: 90 PYNAPTVKFLTPCYHPN--VDTQGNISL---DILKEKWSALYDVRTILLSIQSLLGE 141
|
| >3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} PDB: 3fsh_A 2cyx_A 2kly_A Length = 164 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 7e-26
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 28/163 (17%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
A RL +Y +L +P ++A P N N EW +++GPE+T +E G++ L FP D+
Sbjct: 4 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDY 63
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLS----------MSDFHPDTWNPAWSVSTILTG 112
P PP + PN + R+C+S + + W+P SV IL
Sbjct: 64 PLSPPKMRFTCEMFHPN--IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLS 121
Query: 113 LLSFMVE---RSPTLGSI------EMSDYER--RQLAARSLRF 144
++S + E S + + + +Q+ +SL
Sbjct: 122 VVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLGL 164
|
| >1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 8e-26
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
+ + + ++ L DP + PN ++ + + GPE T Y GG++ KL
Sbjct: 7 VENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKL 66
Query: 61 VFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSF 116
+ +DFP PP Y +T PN N +C+ + W + +L +
Sbjct: 67 LLGKDFPASPPKGYFLTKIFHPN--VGANGEICV---NVLKRDWTAELGIRHVLLTIKCL 121
Query: 117 MVE 119
++
Sbjct: 122 LIH 124
|
| >3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A Length = 167 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 9e-26
Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
+ + L ++ +L+ + N L F + + P+ Y+GG + +
Sbjct: 9 TRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETE 68
Query: 62 FPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSM---SDFHPDTWNPAWSVSTILTGLL 114
P + PP + +T PN +CLS+ W P ++ ++ GL
Sbjct: 69 VPDAYNMVPPKVKCLTKIWHPN--ITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLN 126
Query: 115 SFMVE 119
S +
Sbjct: 127 SLFTD 131
|
| >2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A Length = 149 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 2e-25
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
G R+ ++ L +P P ++A P P N + ++ GP+ T YEGG Y +L P +
Sbjct: 1 GIPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQY 60
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
P +PP + +T PN R+CL D D W+PA + T+L + + +
Sbjct: 61 PMEPPKVRFLTKIYHPN--IDKLGRICL---DILKDKWSPALQIRTVLLSIQALLSS 112
|
| >1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1 Length = 169 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 2e-25
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+RLK++ L +P P + + + + ++G NT YE G++ +++ P +P
Sbjct: 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYP 64
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSM-SDFHPDTWNPAWSVSTILTGLLSFMVE 119
F+PP I +T PN + R+CL + W P+ +++T+LT + M E
Sbjct: 65 FEPPQIRFLTPIYHPN--IDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSE 119
|
| >2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii} Length = 216 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 2e-25
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
+ + RL+++ ++ + + + A +N EW + GPE T YEGG + +
Sbjct: 17 LYFQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAI 76
Query: 61 VFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSF 116
P D+P+ PP I +T PN +T +CL D + W+PA ++ T L + +
Sbjct: 77 TIPNDYPYNPPKIKFVTKIWHPNISSQTG-AICL---DVLKNEWSPALTIRTALLSIQAL 132
Query: 117 MVE 119
+ +
Sbjct: 133 LSD 135
|
| >1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A Length = 155 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 2e-25
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
A+ R+ ++ L+K P PY+ + AN+L W + ++ P+ Y + ++ FP ++
Sbjct: 5 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVW-HALLLPDQPPYHLKAFNLRISFPPEY 63
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
PFKPP I T PN N ++CL + + W P +L L +
Sbjct: 64 PFKPPMIKFTTKIYHPN--VDENGQICLPI--ISSENWKPCTKTCQVLEALNVLVNR 116
|
| >1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ... Length = 150 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 3e-25
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R++++ L +DP A P ++ W ++GP + Y+GG++ + FP D+P
Sbjct: 5 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 64
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
FKPP + T PN +N +CL D W+PA ++S +L + S + +
Sbjct: 65 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCD 115
|
| >3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A Length = 183 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 3e-25
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGK 59
M S + L + L+++P+ + ++ W + GP NT YEGG + +
Sbjct: 3 MGSP--SSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKAR 60
Query: 60 LVFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLS----------MSDFHPDTWNPAWS 105
L FP D+P+ PP+ +T PN +C+S + + WNP +
Sbjct: 61 LKFPIDYPYSPPAFRFLTKMWHPN--IYETGDVCISILHPPVDDPQSGELPSERWNPTQN 118
Query: 106 VSTILTGLLSFMVE 119
V TIL ++S + E
Sbjct: 119 VRTILLSVISLLNE 132
|
| >1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F Length = 155 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 3e-25
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
R+ ++ KL DP+P + AEP+ N+ + + GPE + YE G++ +L P D+
Sbjct: 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDY 64
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
P + P + +T PN R+CL D W+PA + T+L + + +
Sbjct: 65 PMEAPKVRFLTKIYHPN--IDRLGRICL---DVLKTNWSPALQIRTVLLSIQALLAS 116
|
| >2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1 Length = 166 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 3e-25
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
GA R+ ++ L KDP A P ++ W ++GPE++ Y GG++ + FP D+
Sbjct: 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDY 80
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
PFKPP + T PN + +CL D D W+PA ++S +L + S + +
Sbjct: 81 PFKPPKVNFTTKIYHPN--INSQGAICL---DILKDQWSPALTISKVLLSISSLLTD 132
|
| >2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1 Length = 165 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 4e-25
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 31/170 (18%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGK 59
MS A RL ++ +L KD P ++A P + NI W ++ GP +T Y G++ K
Sbjct: 1 MSK---TAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAK 57
Query: 60 LVFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLS----------MSDFHPDTWNPAWS 105
L FP+D+P PP + PN N +C+S M + + W+P S
Sbjct: 58 LEFPKDYPLSPPKLTFTPSILHPN--IYPNGEVCISILHSPGDDPNMYELAEERWSPVQS 115
Query: 106 VSTILTGLLSFMVE---RSPTLGSI------EMSDYER--RQLAARSLRF 144
V IL ++S + E S ++ER + +SL F
Sbjct: 116 VEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLGF 165
|
| >2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A Length = 165 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 5e-25
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R+ ++ L +DP A P ++ W ++GP ++ Y+GG++ + FP D+P
Sbjct: 20 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 79
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
FKPP + T PN +N +CL D W+PA ++S +L + S + +
Sbjct: 80 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCD 130
|
| >2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 5e-25
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPA--NILEWFYVVIGPENTQYEGGMYLG 58
M+S RL+++ + L+ DP P + +I +W + G T YEG +
Sbjct: 20 MAS----MQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQL 75
Query: 59 KLVFPRDFPFKPPSIYMITPNGRF----KTNTRLCLSMSDFHPDTWNPAWSVSTILTGLL 114
F +PF P + N +N +CL + W+PA SV ++ ++
Sbjct: 76 LFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICL---SILTEDWSPALSVQSVCLSII 132
Query: 115 SFM 117
S +
Sbjct: 133 SML 135
|
| >2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A Length = 172 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 6e-25
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 17/127 (13%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
+ L++ +L K+P+ A + ++ W ++IGP +T YEGG++ L FP+D+
Sbjct: 18 GSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDY 77
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLS----------MSDFHPDTWNPAWSVSTILTG 112
P +PP + IT PN N +C+S + + W P +V TI+
Sbjct: 78 PLRPPKMKFITEIWHPN--VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMIS 135
Query: 113 LLSFMVE 119
++S + +
Sbjct: 136 VISMLAD 142
|
| >1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C Length = 154 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 1e-24
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
A+ RL ++ +++K + + AN+L W +I P+N Y+ G + ++ FP ++
Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTW-QGLIVPDNPPYDKGAFRIEINFPAEY 61
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
PFKPP I T PN ++CL + + W PA ++ L++ + +
Sbjct: 62 PFKPPKITFKTKIYHPN--IDEKGQVCLPV--ISAENWKPATKTDQVIQSLIALVND 114
|
| >2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A Length = 161 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 2e-24
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 17/129 (13%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEP-----NPANILEWFYVVIGPENTQYEGGM 55
MS A +RL Q+ +KD +A P N++ W + G + T +EGG+
Sbjct: 4 MSGI---ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGL 60
Query: 56 YLGKLVFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDT-WNPAWSVSTIL 110
+ +++F D+P PP PN + +CLS+ D W PA ++ IL
Sbjct: 61 FKLRMLFKDDYPSSPPKCKFEPPLFHPN--VYPSGTVCLSI--LEEDKDWRPAITIKQIL 116
Query: 111 TGLLSFMVE 119
G+ + E
Sbjct: 117 LGIQELLNE 125
|
| >3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A Length = 194 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-24
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
+ R++++ + DP P A P NI EW ++GP + YEGG++ + F ++
Sbjct: 48 TSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEY 107
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
PFKPP + T N + +CL D D W+PA ++S +L + S + +
Sbjct: 108 PFKPPKVTFRTRIYHCN--INSQGVICL---DILKDNWSPALTISKVLLSICSLLTD 159
|
| >2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B Length = 157 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 3e-24
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEP-----NPANILEWFYVVIGPENTQYEGGM 55
MSS RL+++ K +KD A+P ++ +W + G E T + GG+
Sbjct: 1 MSSL---CLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGV 57
Query: 56 YLGKLVFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDT-WNPAWSVSTIL 110
Y + +P ++P KPP + PN + +CLS+ + D W PA ++ I+
Sbjct: 58 YPITVEYPNEYPSKPPKVKFPAGFYHPN--VYPSGTICLSI--LNEDQDWRPAITLKQIV 113
Query: 111 TGLLSFMVE 119
G+ +
Sbjct: 114 LGVQDLLDS 122
|
| >3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C Length = 190 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 8e-24
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEW----FYVVIGPENTQYEGGMY 56
+ A RLK+D L P + +P + V++ P+ Y G
Sbjct: 23 IQPNLSAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSI 82
Query: 57 LGKLVFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTG 112
L F +P +PP + + PN +CL + + W+PA + +I+TG
Sbjct: 83 NFNLDFNEVYPIEPPKVVCLKKIFHPN--IDLKGNVCL---NILREDWSPALDLQSIITG 137
Query: 113 LLSFMVE 119
LL +E
Sbjct: 138 LLFLFLE 144
|
| >1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A Length = 149 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 9e-24
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
R+ ++ +K DP ++ E + ++I +GP T YEGG ++ + P ++
Sbjct: 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEY 61
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
PFKPP + T PN +CL D + W+P ++ + L L + +
Sbjct: 62 PFKPPKMQFDTKVYHPN-ISSVTGAICL---DILKNAWSPVITLKSALISLQALLQS 114
|
| >3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} Length = 163 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 1e-23
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 15/128 (11%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEP-----NPANILEWFYVVIGPENTQYEGGM 55
SS RL+++ + ++D A+P +++ W + G T +EGG+
Sbjct: 7 HSSL---CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGL 63
Query: 56 YLGKLVFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILT 111
Y + FP ++P +PP PN + +CLS+ + + W PA ++ IL
Sbjct: 64 YKLTMAFPEEYPTRPPKCRFTPPLFHPN--VYPSGTVCLSILN-EEEGWKPAITIKQILL 120
Query: 112 GLLSFMVE 119
G+ + +
Sbjct: 121 GIQDLLDD 128
|
| >4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A Length = 399 | Back alignment and structure |
|---|
Score = 95.8 bits (238), Expect = 2e-23
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R+ ++ L +DP A P ++ W ++GP ++ Y+GG++ + FP D+P
Sbjct: 4 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 63
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
FKPP + T PN +N + L D W+PA ++S +L + S + + +P
Sbjct: 64 FKPPKVAFTTRIYHPN--INSNGSISL---DILRSQWSPALTISKVLLSICSLLCDPNP 117
|
| >1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1 Length = 215 | Back alignment and structure |
|---|
Score = 91.8 bits (228), Expect = 3e-23
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
R+ ++ +K DP ++ E + ++I +GP T YEGG ++ + P ++
Sbjct: 3 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEY 62
Query: 67 PFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
PFKPP + T PN +CL D + W+P ++ + L L + +
Sbjct: 63 PFKPPKMQFDTKVYHPN-ISSVTGAICL---DILRNAWSPVITLKSALISLQALLQS 115
|
| >2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A Length = 172 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 6e-23
Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 23/136 (16%)
Query: 1 MSSKHCGATARLKQDYMKLKK---------DPIPYVIAEPNPA---NILEWFYVVIGPEN 48
M+ +R+ ++Y + K +P +I NP ++ +W ++ GP +
Sbjct: 3 MAD---TCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSD 59
Query: 49 TQYEGGMYLGKLVFPRDFPFKPPSIYMIT-----PNGRFKTNTRLCLSMSDFHPDTWNPA 103
T YE + + P +P PP I + N + T +CL++ P+ W P
Sbjct: 60 TPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATG-EICLNI--LKPEEWTPV 116
Query: 104 WSVSTILTGLLSFMVE 119
W + + + + E
Sbjct: 117 WDLLHCVHAVWRLLRE 132
|
| >2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1 Length = 180 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 8e-23
Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
S K A R+++D +L + +P ++L + +VI P+ Y+ G ++
Sbjct: 21 SKKASAAQLRIQKDINELNLPKTCDISF-SDPDDLLNF-KLVICPDEGFYKSGKFVFSFK 78
Query: 62 FPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
+ +P PP + T PN + L + + W P ++++I+ GL
Sbjct: 79 VGQGYPHDPPKVKCETMVYHPN--IDLEGNVAL---NILREDWKPVLTINSIIYGLQYLF 133
Query: 118 VE 119
+E
Sbjct: 134 LE 135
|
| >3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A Length = 201 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 1e-22
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 1 MSSKHCGATARLK---QDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYL 57
M++ A R+K ++ +K ++ + + N E + GP +T YEGG Y
Sbjct: 2 MANI---AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQ 58
Query: 58 GKLVFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGL 113
++ P +PF PP + IT PN +CL D D W A ++ T+L L
Sbjct: 59 LEIKIPETYPFNPPKVRFITKIWHPNIS-SVTGAICL---DILKDQWAAAMTLRTVLLSL 114
Query: 114 LSFMVERSP 122
+ + P
Sbjct: 115 QALLAAAEP 123
|
| >2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A Length = 159 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 2e-22
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 1 MSSKHCGATARLKQDYMKLKKD---PIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYL 57
M++ A R+K+++ ++ K + + N E + GP +T YEGG Y
Sbjct: 5 MANI---AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQ 61
Query: 58 GKLVFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGL 113
++ P +PF PP + IT PN +CL D D W A ++ T+L L
Sbjct: 62 LEIKIPETYPFNPPKVRFITKIWHPN-ISSVTGAICL---DILKDQWAAAMTLRTVLLSL 117
Query: 114 LSFMVE 119
+ +
Sbjct: 118 QALLAA 123
|
| >1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1 Length = 160 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 2e-22
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+S A R+++D +L + +P ++L + +VI P+ Y+ G ++
Sbjct: 3 MAS---AAQLRIQKDINELNLPKTCDISF-SDPDDLLNF-KLVICPDEGFYKSGKFVFSF 57
Query: 61 VFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSF 116
+ +P PP + T PN +CL + + W P ++++I+ GL
Sbjct: 58 KVGQGYPHDPPKVKCETMVYHPN--IDLEGNVCL---NILREDWKPVLTINSIIYGLQYL 112
Query: 117 MVE 119
+E
Sbjct: 113 FLE 115
|
| >1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B Length = 138 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 3e-22
Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 11/126 (8%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIA----EPNPANILEWFYVVIGPENTQYEGGMY 56
MS RL ++ K +K P + + + + +W ++GP ++ +E +Y
Sbjct: 2 MSKVP--RNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIY 59
Query: 57 LGKLVFPRDFPFKPPSIYMITP---NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGL 113
+ ++P PP + I+ T + W A+++ T+L L
Sbjct: 60 SLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFH--TLRDWKRAYTMETLLLDL 117
Query: 114 LSFMVE 119
M
Sbjct: 118 RKEMAT 123
|
| >2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum} Length = 152 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 4e-22
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
L + K + E N + ++ + GP T YEGG++ + P D+PF
Sbjct: 3 SLTRKQCDFTKLIMAGYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFAS 62
Query: 71 PSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTIL 110
PSI + PN + + +CL D TW P +S+ +
Sbjct: 63 PSIGFMNKLLHPN-VDEASGSVCL---DVINQTWTPLYSLVNVF 102
|
| >2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1 Length = 193 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 8e-22
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFP 63
R V A+ +I W + GP T YEGG + +V P
Sbjct: 42 ADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIP 101
Query: 64 RDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
D+P+ PP + +T PN +T +CL D W+PA ++ T L + + + +
Sbjct: 102 PDYPYNPPKMKFVTKIWHPNISSQTG-AICL---DILKHEWSPALTIRTALLSIQAMLAD 157
|
| >2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A Length = 160 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 1e-21
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 14/122 (11%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP----NPANILEWFYVVIGPENTQYEGGMYLGKLVFP 63
RL ++ + +K ++ + W ++IGP T YE +Y K+
Sbjct: 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECG 85
Query: 64 RDFPFKPPSIYMIT----PNGRFKTN--TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
+P PP + +T +S+ W ++S+ +L L M
Sbjct: 86 PKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV----LAKWQNSYSIKVVLQELRRLM 141
Query: 118 VE 119
+
Sbjct: 142 MS 143
|
| >2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 1e-21
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 14/122 (11%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP----NPANILEWFYVVIGPENTQYEGGMYLGKLVFP 63
RL ++ + +K ++ + W ++IGP T YE +Y K+
Sbjct: 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECG 95
Query: 64 RDFPFKPPSIYMIT----PNGRFKTN--TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
+P PP + +T +S+ W ++S+ +L L M
Sbjct: 96 PKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL----AKWQNSYSIKVVLQELRRLM 151
Query: 118 VE 119
+
Sbjct: 152 MS 153
|
| >2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens} Length = 179 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 8e-21
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
MSS R+ D +KL + I + E+ GP+ T YEGG++ ++
Sbjct: 20 MSSPS-PGKRRMDTDVIKLIESKHEVTILG----GLNEFVVKFYGPQGTPYEGGVWKVRV 74
Query: 61 VFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLS 115
P +PFK PSI + PN + +CL D TW + ++ I L
Sbjct: 75 DLPDKYPFKSPSIGFMNKIFHPNIDEASG-TVCL---DVINQTWTALYDLTNIFESFLP 129
|
| >3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A* Length = 253 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 9e-21
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M++ R ++ +K ++ + + N E + GP +T YEGG Y ++
Sbjct: 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEI 113
Query: 61 VFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSF 116
P +PF PP + IT PN +CL D D W A ++ T+L L +
Sbjct: 114 KIPETYPFNPPKVRFITKIWHPN-ISSVTGAICL---DILKDQWAAAMTLRTVLLSLQAL 169
Query: 117 MVE 119
+
Sbjct: 170 LAA 172
|
| >2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C Length = 156 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 5e-20
Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 19/122 (15%)
Query: 8 ATARLKQDYMKLKKDPIPYVIA----EPNPANILEWFYVVIGPENTQYEGGMYLGKLVFP 63
+ RL + + +K + ++ + + W + G T +E +Y +
Sbjct: 22 RSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCD 81
Query: 64 RDFPFKPPS------IYM--ITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLS 115
++P PP+ I M + G R+ + + WN +++ TIL L
Sbjct: 82 DNYPDSPPTVKFDTKIEMSCVDNCG------RVIKNNLHILKN-WNRNYTIETILISLRQ 134
Query: 116 FM 117
M
Sbjct: 135 EM 136
|
| >1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1 Length = 171 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 3e-19
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ R + DYM+L ++ + E++ GPE T YE G ++ + P D+P
Sbjct: 13 SNRRREMDYMRLCNSTRKVYPSD----TVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYP 68
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTIL 110
FK PSI PN ++ +CL D TW P + + I
Sbjct: 69 FKSPSIGFCNRILHPNVDERSG-SVCL---DVINQTWTPMYQLENIF 111
|
| >4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi} Length = 167 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 4e-19
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 26/133 (19%)
Query: 1 MSSKHCGATARLKQDYMKLKKD------------PIPYVIAEPNPANILEWFYVVIGPEN 48
M + + R+ +D L ++ P I + I W V P +
Sbjct: 5 MKN---ISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPAD 61
Query: 49 TQY--EGGMYLGKLVFPRDFPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNP 102
+ Y G Y ++F D+P +PP++ +T P +C M + D W P
Sbjct: 62 SVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPL--VTGEGGICDRMVN---DFWTP 116
Query: 103 AWSVSTILTGLLS 115
S ++ +L
Sbjct: 117 DQHASDVIKLVLD 129
|
| >1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A Length = 186 | Back alignment and structure |
|---|
Score = 80.0 bits (197), Expect = 6e-19
Identities = 21/139 (15%), Positives = 49/139 (35%), Gaps = 20/139 (14%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPY---VIAEPNPANILEWFYVVIG-PENTQYEGGM-- 55
S A+ RL ++ + + E ++ +W + ++ +
Sbjct: 22 VSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQI 81
Query: 56 ---------YLGKLVFPRDFPFKPPSIYMITP---NGRFKTNTRLCLSMSDFHPDTWNPA 103
L F +FPF PP + ++ P G LC+ + W+ A
Sbjct: 82 LKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMEL--LTKQGWSSA 139
Query: 104 WSVSTILTGLLSFMVERSP 122
+S+ +++ + + +V+
Sbjct: 140 YSIESVIMQINATLVKGKA 158
|
| >3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens} Length = 323 | Back alignment and structure |
|---|
Score = 74.3 bits (182), Expect = 4e-16
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 17/130 (13%)
Query: 1 MSSKHCGATARLKQDYMKLKKDP----IPYVIAEPNPANILEWFYVVIGPENTQYEGGMY 56
+ RL Q+ + L V + + ++ GP +T Y G +
Sbjct: 70 NDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCF 129
Query: 57 LGKLVFPRDFPFKPPSIYMITPNG---RFKTNT----RLCLSM----SDFHPDTWNPAWS 105
+ FP+D+P PP + + T G RF N ++CLS+ + WNP
Sbjct: 130 EFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQ-- 187
Query: 106 VSTILTGLLS 115
S+ L L+S
Sbjct: 188 TSSFLQVLVS 197
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-13
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDK--SLYEAHPCLQAEDIANTVEFILSSPPHVQVSR 214
ISPG+V++Q +K + YE CL+ ED+A V ++LS+P H+Q+
Sbjct: 214 ATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGD 271
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 4e-11
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDK----SLYEAHPCLQAEDIANTVEFILSSPPHVQVSR 214
V I PG ++ + + K LQA+DIA V + +++P H V
Sbjct: 180 VVVIEPGTTDTE-LRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVTAPHHATVHE 238
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 8e-11
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 134 RRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQA 193
R++ A +R V ++SPG + + + L D + ++
Sbjct: 161 RKEEANNGIR---------------VSTVSPGPTNTPMLQG-LMDSQGTNFRPEIY-IEP 203
Query: 194 EDIANTVEFILSSPPHVQVS 213
++IAN + F++ + Q++
Sbjct: 204 KEIANAIRFVIDAGETTQIT 223
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 1e-10
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDK----SLYEAHPCLQAEDIANTVEFILSSPPHVQVSR 214
V I PGLV F S++ K D Y+ L ED++ V ++ + P HV ++
Sbjct: 172 VTDIEPGLVGGTEF-SNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINT 230
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-10
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Query: 159 VQSISPGLVKSQ----IFKSSLGD--KFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212
V I+PGLV+++ ++ G+ + +Y+ L A+D+A+ + + S + +
Sbjct: 213 VILIAPGLVETEFSLVRYR---GNEEQAKN-VYKDTTPLMADDVADLIVYATSRKQNTVI 268
Query: 213 SR 214
+
Sbjct: 269 AD 270
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 7e-10
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 159 VQSISPGLVKS----QIFKSSLGD--KFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212
V ++ PGL +S F GD ++DK Y +Q EDIA T+ +I++ P H+ +
Sbjct: 196 VTNLEPGLCESEFSLVRFG---GDQARYDK-TYAGAHPIQPEDIAETIFWIMNQPAHLNI 251
Query: 213 SR 214
+
Sbjct: 252 NS 253
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 1e-09
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 159 VQSISPGLVKS----QIFKSSLGDKFD-KSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213
V ++PG+V+S I + Y A LQ DIA V ++ +P V +
Sbjct: 176 VTCVNPGVVESELAGTITH---EETMAAMDTYRAIA-LQPADIARAVRQVIEAPQSVDTT 231
Query: 214 R 214
Sbjct: 232 E 232
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-09
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEA-----HPCLQAEDIANTVEFILSSPPHVQVS 213
V +I+P VK++ S + K Y+A L A+D+A V F P +V +
Sbjct: 184 VMTIAPSAVKTE-LLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIR 242
Query: 214 R 214
Sbjct: 243 E 243
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 2e-09
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVSR 214
V ++ PG V + F + L+ ED+A V F L P H VS
Sbjct: 175 VVNVLPGSVDTG---------FAGNTPGQAWKLKPEDVAQAVLFALEMPGHAMVSE 221
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 4e-09
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213
+ PG V + S K K + L+ ++IA V +L P V+V
Sbjct: 174 FFELRPGAVDTYFGGS----KPGKPKEKG--YLKPDEIAEAVRCLLKLPKDVRVE 222
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 5e-08
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213
V ++ PG V + + K + +Q +D+ NT+ +L+ +V +
Sbjct: 183 VTTLCPGWVNTD-----MAKKAGTPFKDEEM-IQPDDLLNTIRCLLNLSENVCIK 231
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 9e-08
Identities = 10/55 (18%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213
+ ++ PG + ++ +++S + + AED A + L++ + VS
Sbjct: 168 IIAVYPGGMATEFWETS------GKSLDTSSFMSAEDAALMIHGALANIGNGYVS 216
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 5e-07
Identities = 13/80 (16%), Positives = 21/80 (26%), Gaps = 22/80 (27%)
Query: 134 RRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQA 193
R ++R + PG V + + D+ + +
Sbjct: 173 RLYARKCNVRIT---------------DVQPGAVYTP-MWGKVDDEMQALM------MMP 210
Query: 194 EDIANTVEFILSSPPHVQVS 213
EDIA V P V
Sbjct: 211 EDIAAPVVQAYLQPSRTVVE 230
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 1e-04
Identities = 7/55 (12%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213
+ ++ P ++S+ + ++ + + ED A + L + V+
Sbjct: 173 LVNLYPSGIRSEFWDNT-------DHVDPSGFMTPEDAAAYMLDALEARSSCHVT 220
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 214 | |||
| 2f4w_A | 187 | Ubiquitin-conjugating enzyme E2, J2; endoplasmic r | 100.0 | |
| 2fo3_A | 125 | Ubiquitin-conjugating enzyme; SGC, UBC, structural | 100.0 | |
| 1ayz_A | 169 | UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin | 100.0 | |
| 2h2y_A | 136 | Ubiquitin-conjugating enzyme; structural genomics, | 100.0 | |
| 1zdn_A | 158 | Ubiquitin-conjugating enzyme E2S; structural genom | 100.0 | |
| 4gpr_A | 151 | Ubiquitin-conjugating enzyme family protein; ubiqu | 100.0 | |
| 1yh2_A | 169 | HSPC150 protein similar to ubiquitin-conjugating e | 100.0 | |
| 2e2c_A | 156 | Ubiquitin conjugating enzyme; ubiquitin conjugatio | 100.0 | |
| 2ayv_A | 166 | Ubiquitin-conjugating enzyme E2; structural genomi | 100.0 | |
| 2ucz_A | 165 | UBC7, ubiquitin conjugating enzyme; ubiquitin conj | 100.0 | |
| 2c4o_A | 165 | Ubiquitin-conjugating enzyme E2 D2; thioesterifica | 100.0 | |
| 1z2u_A | 150 | Ubiquitin-conjugating enzyme E2 2; PSI, secsg, pro | 100.0 | |
| 2aak_A | 152 | UBC1, ubiquitin conjugating enzyme; ubiquitin conj | 100.0 | |
| 2c2v_B | 154 | Ubiquitin-conjugating enzyme E2 N; chaperone, heat | 100.0 | |
| 1yrv_A | 169 | Ubiquitin-conjugating ligase MGC351130; structural | 100.0 | |
| 2a7l_A | 136 | Hypothetical ubiquitin-conjugating enzyme LOC55284 | 100.0 | |
| 3rz3_A | 183 | Ubiquitin-conjugating enzyme E2 R1; ubiquitin conj | 100.0 | |
| 3h8k_A | 164 | Ubiquitin-conjugating enzyme E2 G2; alpha beta, al | 100.0 | |
| 3rcz_B | 163 | SUMO-conjugating enzyme UBC9; SUMO-like domain, pr | 100.0 | |
| 2awf_A | 172 | Ubiquitin-conjugating enzyme E2 G1; ligase, UBL co | 100.0 | |
| 1i7k_A | 179 | Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A | 100.0 | |
| 2bep_A | 159 | Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 | 100.0 | |
| 1jat_A | 155 | Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, lig | 100.0 | |
| 2r0j_A | 149 | Ubiquitin carrier protein; ubiquitin conjugating, | 100.0 | |
| 2pwq_A | 216 | Ubiquitin conjugating enzyme; structural genomics | 100.0 | |
| 2gjd_A | 157 | Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT | 100.0 | |
| 2grr_A | 161 | Ubiquitin-conjugating enzyme E2 I; ubiquitin, conj | 99.98 | |
| 3bzh_A | 194 | Ubiquitin-conjugating enzyme E2 E1; structural gen | 99.98 | |
| 1fxt_A | 149 | Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NM | 99.98 | |
| 2f4z_A | 193 | Tgtwinscan_2721 - E2 domain; ubiquitin conjugating | 99.98 | |
| 3k9o_A | 201 | Ubiquitin-conjugating enzyme E2 K; E2-25K, complex | 99.97 | |
| 2a4d_A | 160 | Ubiquitin-conjugating enzyme E2 variant 1; alterna | 99.97 | |
| 1wzv_A | 155 | Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A | 99.97 | |
| 2y9m_A | 172 | Ubiquitin-conjugating enzyme E2-21 kDa; ligase-tra | 99.97 | |
| 2q0v_A | 156 | Ubiquitin-conjugating enzyme E2, putative; malaria | 99.97 | |
| 3e46_A | 253 | Ubiquitin-conjugating enzyme E2-25 kDa; huntington | 99.97 | |
| 3fn1_B | 167 | NEDD8-conjugating enzyme UBE2F; ligase, ATP-bindin | 99.97 | |
| 1jat_B | 138 | Ubiquitin-conjugating enzyme variant MMS2; UEV, li | 99.97 | |
| 1y8x_A | 160 | Ubiquitin-conjugating enzyme E2 M; ubiquitin-conju | 99.97 | |
| 2nvu_C | 180 | NEDD8-conjugating enzyme UBC12; multifunction macr | 99.97 | |
| 1tte_A | 215 | Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiq | 99.97 | |
| 2hlw_A | 170 | Ubiquitin-conjugating enzyme E2 variant 1; ubiquit | 99.97 | |
| 1zuo_A | 186 | Hypothetical protein LOC92912; ligase, ubiquitin-c | 99.97 | |
| 1c4z_D | 154 | UBCH7, ubiquitin conjugating enzyme E2; bilobal st | 99.96 | |
| 4ds2_A | 167 | Ubiquitin-conjugating enzyme E2, putative; structu | 99.96 | |
| 4ddg_A | 399 | Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI | 99.96 | |
| 2onu_A | 152 | Ubiquitin-conjugating enzyme, putative; UBC, plasm | 99.96 | |
| 3ceg_A | 323 | Baculoviral IAP repeat-containing protein 6; apopt | 99.96 | |
| 3o2u_A | 190 | NEDD8-conjugating enzyme UBC12; E2 conjugase, liga | 99.96 | |
| 2z5d_A | 179 | Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, lig | 99.96 | |
| 1yf9_A | 171 | Ubiquitin carrier protein 4; SGPP, structural geno | 99.96 | |
| 2z6o_A | 172 | UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, p | 99.87 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.86 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.86 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.84 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.83 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.82 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.81 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.8 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.77 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.75 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.66 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.66 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.65 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.65 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.65 | |
| 3kpa_A | 168 | Probable ubiquitin fold modifier conjugating ENZY; | 99.64 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.63 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.63 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.62 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.62 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.62 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.62 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.61 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.61 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.6 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.6 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.6 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.59 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.59 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.59 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.58 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.58 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.58 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.58 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.58 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.58 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.58 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.57 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.57 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.57 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.57 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.57 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.57 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.57 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.57 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.57 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.57 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.57 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.57 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.57 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.57 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.57 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.56 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.56 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.56 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.56 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.56 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.56 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.56 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.55 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.55 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.55 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.55 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.55 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.55 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.55 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.55 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.55 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.55 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.54 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.54 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.54 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.54 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.54 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.54 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.54 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.54 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.53 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.53 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.53 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.53 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.52 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.52 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.52 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.52 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.51 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.51 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.5 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.5 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.5 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.5 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.5 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.5 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.5 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.5 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.49 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.49 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.49 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.49 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.49 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.49 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.49 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.49 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.49 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.49 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.48 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.48 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.48 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.48 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.48 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.48 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.48 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.48 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.48 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.47 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.47 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.47 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.47 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.47 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.47 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.47 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.47 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.47 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.46 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.46 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.45 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.45 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.45 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.45 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.45 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.45 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.45 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.45 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.44 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.44 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.44 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.44 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.44 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.44 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.43 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.43 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.43 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.43 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.43 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.43 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.43 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.42 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.42 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.42 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.42 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.42 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.41 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.41 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.41 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.41 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.4 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.4 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.4 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.39 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.39 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.39 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.39 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.39 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.39 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.39 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.39 | |
| 3r3q_A | 162 | Suppressor protein STP22 of temperature-sensitive | 99.38 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.38 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.38 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.37 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.35 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.35 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.34 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.34 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.34 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.33 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.32 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.31 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.3 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.3 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.29 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.28 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.28 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.27 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.26 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.26 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.25 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.25 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.25 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.25 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.24 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.23 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.23 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.23 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.22 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.22 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.21 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.21 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.2 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.19 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.19 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.18 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.17 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.17 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.16 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.12 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.1 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.1 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.1 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.09 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.09 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.09 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.08 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.07 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.07 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.06 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.04 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.95 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.91 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.9 | |
| 3obq_A | 146 | Tumor susceptibility gene 101 protein; protein tra | 98.89 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.83 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.78 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 98.74 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 98.26 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.18 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.16 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.02 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 97.81 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 97.5 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 97.5 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.19 | |
| 2yz0_A | 138 | Serine/threonine-protein kinase GCN2; A-B-B-B-B-A- | 97.04 | |
| 2ebm_A | 128 | RWD domain-containing protein 1; alpha+beta sandwi | 97.03 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 96.83 | |
| 2day_A | 128 | Ring finger protein 25; ligase, metal-binding, UB1 | 96.83 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 96.68 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 96.64 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 96.63 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 96.48 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 96.44 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 96.43 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 96.39 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 96.36 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 96.29 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 96.28 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 96.21 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 96.19 | |
| 2daw_A | 154 | RWD domain containing protein 2; alpha+beta sandwi | 96.03 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 96.02 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 96.01 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 95.9 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 95.83 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 95.8 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 95.69 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 95.56 | |
| 1ukx_A | 137 | GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple | 95.49 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 95.44 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 95.33 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 95.3 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 95.24 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 95.19 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 95.18 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 95.1 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 94.89 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 94.88 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 94.74 | |
| 2ebk_A | 128 | RWD domain-containing protein 3; alpha+beta sandwi | 94.58 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 94.22 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 94.17 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 93.91 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 93.32 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 93.23 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 93.15 | |
| 2dax_A | 152 | Protein C21ORF6; RWD domain, alpha+beta sandwich f | 93.13 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 92.97 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 92.76 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 92.74 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 92.61 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 92.6 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 92.1 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 91.96 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 91.89 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 91.27 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 91.22 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 90.81 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 90.68 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 90.55 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 90.49 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 90.41 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 90.31 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 90.21 | |
| 3zqs_A | 186 | E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A | 89.43 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 88.95 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 88.16 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 88.12 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 87.61 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 86.95 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 85.94 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 85.93 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 84.88 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 81.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 80.2 |
| >2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=233.20 Aligned_cols=155 Identities=77% Similarity=1.348 Sum_probs=131.0
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecC
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT 84 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ 84 (214)
++.+.+||++|+++|++++++||.+.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+|++||+
T Consensus 12 ~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~~~~~~~ 91 (187)
T 2f4w_A 12 PTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKC 91 (187)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCSSBCT
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCCCceecc
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred CCceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCCCCCCCcCcHHHHHHHHHHHHHhhccCcchhhhCcccc
Q psy818 85 NTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLV 159 (214)
Q Consensus 85 ng~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v~i~S~a~~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~v 159 (214)
||.||+++++...+.|++.+++..++.+++.+|.++++..+++....+...+.|..+..+.+.+..+++.+|..+
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~~~~~~f~~~fp~~~ 166 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVV 166 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHHTCHHHHHHCHHHH
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCcccccChHHHHHHHHHHHHHhhcCchHHHhhHHHH
Confidence 999999998765689999999999999999999999888888877778888888888888887665666666533
|
| >2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-34 Score=204.75 Aligned_cols=111 Identities=29% Similarity=0.598 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCce-ecC
Q psy818 6 CGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGR-FKT 84 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~-~h~ 84 (214)
+.+.+||++|+++|++++++|+++.++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ + |||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~--i~~HP 82 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQK--PPKHT 82 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSS--CCCBT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCC--CCCCC
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999998 5 888
Q ss_pred C----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 85 N----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 85 n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 83 nv~~~G~iCl~iL~---~~W~P~~~i~~vl~si~~ll~~p~ 120 (125)
T 2fo3_A 83 HVYSNGDICLSLLG---DDYNPSLSISGLVLSIISMLSSAK 120 (125)
T ss_dssp TBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHC---
T ss_pred cCCCCCEEEchhcC---CCCCCCCcHHHHHHHHHHHHhCcc
Confidence 6 899999885 789999999999999999987654
|
| >1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=213.75 Aligned_cols=113 Identities=33% Similarity=0.690 Sum_probs=105.8
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
|++.+.+||++|+++|++++++||.+.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~--i~H 78 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSE--MFH 78 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccC--Ccc
Confidence 356789999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.||++++. +.|++.+++..++.+++.+|.+++
T Consensus 79 PNI~~~G~ICl~iL~---~~WsP~~~i~~vL~si~~ll~~Pn 117 (169)
T 1ayz_A 79 PNVYANGEICLDILQ---NRWTPTYDVASILTSIQSLFNDPN 117 (169)
T ss_dssp TTBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHTCCC
T ss_pred CCCCCCCeEeehhhc---cCCCCcCcHHHHHHHHHHHHhCCC
Confidence 87 899999875 789999999999999999998765
|
| >2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=205.02 Aligned_cols=111 Identities=29% Similarity=0.600 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCce-ecC
Q psy818 6 CGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGR-FKT 84 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~-~h~ 84 (214)
+.+.+||++|+++|++++++|+++.++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ + |||
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~--i~~HP 96 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQK--PPKHT 96 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSS--CCCCT
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCC--CCCCC
Confidence 4688999999999999999999999999999999999999999999999999999999999999999999998 5 887
Q ss_pred C----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 85 N----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 85 n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
| |.+|++++. ++|++.+++..++.+++.+|.++.
T Consensus 97 nv~~~G~ICl~iL~---~~WsP~~ti~~vL~si~sll~~p~ 134 (136)
T 2h2y_A 97 HVYSNGDICLSVLG---DDYNPSLSISGLILSIISMLSSAK 134 (136)
T ss_dssp TBCTTCCBCCGGGT---TTCCTTCCHHHHHHHHHHHHSSSC
T ss_pred cCCCCCEEECcccc---CCCCCCCcHHHHHHHHHHHHhCcC
Confidence 6 899999885 789999999999999999887653
|
| >1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=211.29 Aligned_cols=115 Identities=23% Similarity=0.478 Sum_probs=108.6
Q ss_pred CCCchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCce
Q psy818 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGR 81 (214)
Q Consensus 2 ~~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~ 81 (214)
..++..+.+||++|+++|++++++||++.++++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ +
T Consensus 8 ~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i 85 (158)
T 1zdn_A 8 ENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTK--I 85 (158)
T ss_dssp CCSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--C
T ss_pred cccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccC--c
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred ecCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 82 FKTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 82 ~h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|||| |.+|++++. ++|++.+++..++..++.+|.+++
T Consensus 86 ~HPnv~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn 126 (158)
T 1zdn_A 86 FHPNVGANGEICVNVLK---RDWTAELGIRHVLLTIKCLLIHPN 126 (158)
T ss_dssp CCTTBCTTSBBCHHHHT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred ccCCCCCCCEEehhhcC---CCCCCCCcHHHHHHHHHHHHhCCC
Confidence 9987 899999875 789999999999999999998876
|
| >4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=208.52 Aligned_cols=113 Identities=27% Similarity=0.663 Sum_probs=106.5
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
++..+.+||++|+++|+++++.||++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||
T Consensus 1 sa~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i~H 78 (151)
T 4gpr_A 1 SAAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTK--VYH 78 (151)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCB
T ss_pred CchHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecC--ccc
Confidence 356899999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 79 Pnv~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~ 117 (151)
T 4gpr_A 79 PNINKNGVICLDILK---DQWSPALTLSRVLLSISSLLTDPN 117 (151)
T ss_dssp TTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHCCC
T ss_pred ceECCCCEEEccccc---CCCCCCCcHHHHHHHHHHHhcCCC
Confidence 87 899999875 789999999999999999998865
|
| >1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=211.47 Aligned_cols=116 Identities=28% Similarity=0.627 Sum_probs=108.3
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecC
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT 84 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ 84 (214)
|+.+.+||++|+++|++++++||++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HP 79 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTP--IYHP 79 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecC--Cccc
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999 8998
Q ss_pred C----CceeeecCCCCC-CCCcCcccHHHHHHHHHHhhccCCC
Q psy818 85 N----TRLCLSMSDFHP-DTWNPAWSVSTILTGLLSFMVERSP 122 (214)
Q Consensus 85 n----g~ic~~~l~~~~-e~w~~~~~vn~~l~a~~~~m~~~~v 122 (214)
| |.||++++.... ++|++.+++..++.+++.+|.++++
T Consensus 80 Nv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~ 122 (169)
T 1yh2_A 80 NIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNP 122 (169)
T ss_dssp TBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCT
T ss_pred cCCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCC
Confidence 7 899999886544 7899999999999999999988653
|
| >2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=209.98 Aligned_cols=113 Identities=32% Similarity=0.619 Sum_probs=106.1
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
+++.+.+||++|+++|++++++||++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||
T Consensus 6 ~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~H 83 (156)
T 2e2c_A 6 ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTP--CWH 83 (156)
T ss_dssp SCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCB
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCC--ccc
Confidence 446799999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 84 Pnv~~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~pn 122 (156)
T 2e2c_A 84 PNVDQSGNICLDILK---ENWTASYDVRTILLSLQSLLGEPN 122 (156)
T ss_dssp TTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHTTSCC
T ss_pred CCCccCceEECcccc---ccCCCCCcHHHHHHHHHHHHhCCC
Confidence 86 899999875 789999999999999999998765
|
| >2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=211.00 Aligned_cols=113 Identities=31% Similarity=0.716 Sum_probs=106.3
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
.++.+.+||++|+++|++++++||++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~--i~H 95 (166)
T 2ayv_A 18 YFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTK--IYH 95 (166)
T ss_dssp -CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CCB
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccC--CcC
Confidence 456789999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.||++++. ++|++.+++..++.+++.+|.+++
T Consensus 96 PNI~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pn 134 (166)
T 2ayv_A 96 PNINSQGAICLDILK---DQWSPALTISKVLLSISSLLTDPN 134 (166)
T ss_dssp TTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CcCCCCCeEEccccc---ccCCCCCcHHHHHHHHHHHHhCCC
Confidence 87 899999886 789999999999999999998865
|
| >2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=211.01 Aligned_cols=116 Identities=31% Similarity=0.630 Sum_probs=106.0
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecC-CCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNP-ANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
|++.+.+||++|+++|++++++||++.+.+ +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~--i~ 78 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPS--IL 78 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CS
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCC--Cc
Confidence 456899999999999999999999999875 799999999999999999999999999999999999999999999 89
Q ss_pred cCC----CceeeecCCC----------CCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 83 KTN----TRLCLSMSDF----------HPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 83 h~n----g~ic~~~l~~----------~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
||| |.||++++.. ..+.|++.+++..++.+++.+|.+++
T Consensus 79 HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn 131 (165)
T 2ucz_A 79 HPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPN 131 (165)
T ss_dssp CTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCC
T ss_pred cCCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCC
Confidence 986 8999998842 24789999999999999999998765
|
| >2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-33 Score=209.79 Aligned_cols=114 Identities=27% Similarity=0.675 Sum_probs=107.0
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
...+.+.+||++|+++|++++++||++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|
T Consensus 15 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~--i~ 92 (165)
T 2c4o_A 15 PRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR--IY 92 (165)
T ss_dssp -CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CC
T ss_pred cCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecC--Cc
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred cCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 83 KTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 83 h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
||| |.||++++. ++|++.+++..++.+++.+|.+++
T Consensus 93 HPnV~~~G~ICl~iL~---~~W~P~~ti~~vL~si~~ll~~pn 132 (165)
T 2c4o_A 93 HPNINSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPN 132 (165)
T ss_dssp BTTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCcCCCCCeEeehhhc---CCCCCcCcHHHHHHHHHHHHhCCC
Confidence 987 899999886 789999999999999999998765
|
| >1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=207.89 Aligned_cols=112 Identities=28% Similarity=0.674 Sum_probs=106.1
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecC
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT 84 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ 84 (214)
|+.+.+||++|+++|++++++|+++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HP 79 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTR--IYHP 79 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecC--cccC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999 8998
Q ss_pred C----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 85 N----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 85 n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 80 nv~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn 117 (150)
T 1z2u_A 80 NINSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPN 117 (150)
T ss_dssp TBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred cCCCCCeEeecccc---CCCCCCCCHHHHHHHHHHHhhCCC
Confidence 7 899999876 789999999999999999998765
|
| >2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=207.93 Aligned_cols=113 Identities=31% Similarity=0.705 Sum_probs=106.1
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
|++.+.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~H 78 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSR--MFH 78 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecC--ccc
Confidence 456789999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 79 Pnv~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~ 117 (152)
T 2aak_A 79 PNIYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPN 117 (152)
T ss_dssp TTBCTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHTSCC
T ss_pred CCCCCCCEEechhhc---CCCCCCCcHHHHHHHHHHHHhCCC
Confidence 86 899999875 789999999999999999998765
|
| >2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=210.43 Aligned_cols=113 Identities=27% Similarity=0.648 Sum_probs=106.3
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
+|..+.+||++|+++|++++++|+++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~H 79 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTK--IYH 79 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecC--ccc
Confidence 455778999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 80 Pnv~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn 118 (154)
T 2c2v_B 80 PNVDKLGRICLDILK---DKWSPALQIRTVLLSIQALLSAPN 118 (154)
T ss_dssp TTBCTTCBBCCHHHH---TSCCTTCCHHHHHHHHHHHTTSCC
T ss_pred CcCccCCeEEchhcc---CCCCCCCcHHHHHHHHHHHHhCCC
Confidence 87 899999875 789999999999999999998865
|
| >1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=212.91 Aligned_cols=116 Identities=26% Similarity=0.545 Sum_probs=107.8
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
.|++.+.+||++|+++|++++++||.+.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|
T Consensus 19 ~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~--i~ 96 (169)
T 1yrv_A 19 SMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITI--PF 96 (169)
T ss_dssp GGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSC--CC
T ss_pred ccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCC--Cc
Confidence 4667899999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred cCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 83 KTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 83 h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
||| |.+|++++. ..++|++.+++..++.+++.+|.+++
T Consensus 97 HPNI~~~~G~ICL~iL~-~~~~WsP~~ti~~vL~sI~sll~~Pn 139 (169)
T 1yrv_A 97 HPNVDPHTGQPCIDFLD-NPEKWNTNYTLSSILLALQVMLSNPV 139 (169)
T ss_dssp CTTBCTTTCCBCCHHHH-CGGGCCTTCCHHHHHHHHHHHHTSCC
T ss_pred cCcccCCCCeEeehhhc-CCcCCCCcCCHHHHHHHHHHHHhCCC
Confidence 987 789999875 34789999999999999999998765
|
| >2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=205.31 Aligned_cols=104 Identities=25% Similarity=0.575 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHhcCCCCCeEEe--ecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee--cC
Q psy818 9 TARLKQDYMKLKKDPIPYVIAE--PNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF--KT 84 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~~~~~~--~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~--h~ 84 (214)
.+||++|+++|++++++|+++. ++++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+ +| ||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~--i~~~HP 101 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGE--NIPVHP 101 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESS--CCCCBT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCC--CcCCCc
Confidence 3999999999999999999865 788999999999999999999999999999999999999999999999 66 98
Q ss_pred C----CceeeecCCCCCCCCcCcccHHHHHHHHHHhh
Q psy818 85 N----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117 (214)
Q Consensus 85 n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m 117 (214)
| |.||++++. ++|++.+++..++.+++.+|
T Consensus 102 NV~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~slL 135 (136)
T 2a7l_A 102 HVYSNGHICLSILT---EDWSPALSVQSVCLSIISML 135 (136)
T ss_dssp TBCTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHT
T ss_pred cCCCCCeEEchhcC---CCCCCCCcHHHHHHHHHHHh
Confidence 6 899999885 78999999999999988776
|
| >3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=212.28 Aligned_cols=118 Identities=27% Similarity=0.592 Sum_probs=105.2
Q ss_pred CCCchHHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCc
Q psy818 2 SSKHCGATARLKQDYMKLKKDPIPYVIAE-PNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNG 80 (214)
Q Consensus 2 ~~~~~~~~~rl~~e~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~ 80 (214)
+++++.+.|||++|+++|++++++||++. ++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 am~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-- 79 (183)
T 3rz3_A 2 AMGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTK-- 79 (183)
T ss_dssp ---CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--
T ss_pred CCcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCC--
Confidence 45667899999999999999999999998 678899999999999999999999999999999999999999999999
Q ss_pred eecCC----CceeeecCCC----------CCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 81 RFKTN----TRLCLSMSDF----------HPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 81 ~~h~n----g~ic~~~l~~----------~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
+|||| |.+|++++.. ..+.|++.+++..++.+++.+|.+++
T Consensus 80 i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn 134 (183)
T 3rz3_A 80 MWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPN 134 (183)
T ss_dssp CCCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCC
Confidence 89987 9999998752 13789999999999999999998765
|
| >3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=208.12 Aligned_cols=114 Identities=32% Similarity=0.649 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCC-CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecC
Q psy818 6 CGATARLKQDYMKLKKDPIPYVIAEPNPA-NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT 84 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ 84 (214)
+.+.+||++|+++|++++++||++.+.++ |+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HP 79 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCE--MFHP 79 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CCCT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCC--CccC
Confidence 57899999999999999999999998866 99999999999999999999999999999999999999999999 9998
Q ss_pred C----CceeeecCCC----------CCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 85 N----TRLCLSMSDF----------HPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 85 n----g~ic~~~l~~----------~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
| |.+|++++.. ..+.|++.+++..++.+++.+|.+++
T Consensus 80 NV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn 130 (164)
T 3h8k_A 80 NIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPN 130 (164)
T ss_dssp TBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCC
Confidence 7 8999998853 23789999999999999999998865
|
| >3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-33 Score=208.88 Aligned_cols=114 Identities=25% Similarity=0.587 Sum_probs=105.4
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCC-----CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCC
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPA-----NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPN 79 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~ 79 (214)
|..+.+||+||+++|++++++||++.+.++ |+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~- 86 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPP- 86 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCC-
Confidence 567999999999999999999999998865 99999999999999999999999999999999999999999999
Q ss_pred ceecCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 80 GRFKTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 80 ~~~h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
+|||| |.+|++++. ..+.|++.+++..++.+++.+|.+++
T Consensus 87 -i~HPnV~~~G~iCl~iL~-~~~~W~p~~ti~~vL~~i~~ll~~P~ 130 (163)
T 3rcz_B 87 -LFHPNVYPSGTVCLSILN-EEEGWKPAITIKQILLGIQDLLDDPN 130 (163)
T ss_dssp -CCSTTBCTTSBBCCGGGC-TTTTCCTTCCHHHHHHHHHHHHTSCC
T ss_pred -CccCCCCCCCcEeccccC-CCCCcCCcCcHHHHHHHHHHHHhCCC
Confidence 99998 999999886 33579999999999999999997765
|
| >2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=208.65 Aligned_cols=117 Identities=27% Similarity=0.609 Sum_probs=106.5
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCeEEeecC-CCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCce
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPYVIAEPNP-ANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGR 81 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~ 81 (214)
..++.+.+||++|+++|++++++||++.+.+ +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +
T Consensus 13 ~~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~--i 90 (172)
T 2awf_A 13 GLVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITE--I 90 (172)
T ss_dssp CCCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--C
T ss_pred CChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCC--C
Confidence 4567899999999999999999999999875 799999999999999999999999999999999999999999999 8
Q ss_pred ecCC----CceeeecCCC----------CCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 82 FKTN----TRLCLSMSDF----------HPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 82 ~h~n----g~ic~~~l~~----------~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|||| |.||++++.. ..+.|++.+++..++..++.+|.+++
T Consensus 91 ~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn 144 (172)
T 2awf_A 91 WHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPN 144 (172)
T ss_dssp CCTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-
T ss_pred ccCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcC
Confidence 9987 8999998753 23689999999999999999998764
|
| >1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=211.43 Aligned_cols=113 Identities=27% Similarity=0.500 Sum_probs=104.8
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
+++.+.+||++|+++|++++++||++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~--i~H 104 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTP--CYH 104 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSC--CCS
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecC--Ccc
Confidence 467789999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.||++++. +.|++.+++..++.+++.+|.+++
T Consensus 105 PNV~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~Pn 143 (179)
T 1i7k_A 105 PNVDTQGNISLDILK---EKWSALYDVRTILLSIQSLLGEPN 143 (179)
T ss_dssp TTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CccccCCeEEcccCc---CcCCCCCCHHHHHHHHHHHHhCCC
Confidence 87 899999875 789999999999999999998765
|
| >2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-32 Score=205.27 Aligned_cols=113 Identities=27% Similarity=0.512 Sum_probs=105.1
Q ss_pred CchHHHHHHHHHHHHHhcC---CCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCc
Q psy818 4 KHCGATARLKQDYMKLKKD---PIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNG 80 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~ 80 (214)
|++.+.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-- 82 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK-- 82 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCC--
Confidence 5678999999999999985 57899999999999999999999999999999999999999999999999999999
Q ss_pred eecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 81 RFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 81 ~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
+|||| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 83 i~HPni~~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~ 125 (159)
T 2bep_A 83 IWHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAE 125 (159)
T ss_dssp CCBTTBCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCccCCCCCCCEEeChhhh---ccCCCCCcHHHHHHHHHHHHhCCC
Confidence 89986 789999875 789999999999999999998875
|
| >1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-33 Score=207.03 Aligned_cols=112 Identities=28% Similarity=0.621 Sum_probs=105.3
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecC
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT 84 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ 84 (214)
+..+.+||++|+++|++++++||++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|||
T Consensus 3 ~~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HP 80 (155)
T 1jat_A 3 AASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTK--IYHP 80 (155)
T ss_dssp CCSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSC--CCBT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecc--cccC
Confidence 34577999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred C----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 85 N----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 85 n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 81 nv~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~ 118 (155)
T 1jat_A 81 NIDRLGRICLDVLK---TNWSPALQIRTVLLSIQALLASPN 118 (155)
T ss_dssp TBCTTCCBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCCEEEchhhc---cCCCCCCCHHHHHHHHHHHHhCCC
Confidence 7 899999885 789999999999999999998865
|
| >2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=203.98 Aligned_cols=108 Identities=30% Similarity=0.691 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC---
Q psy818 9 TARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN--- 85 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n--- 85 (214)
.+||++|+++|++++++|+++.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPnv~~ 80 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTK--IYHPNIDK 80 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSC--CCBTTBCT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccC--CccCCCCC
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred -CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 -TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 -g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 81 ~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~ 114 (149)
T 2r0j_A 81 LGRICLDILK---DKWSPALQIRTVLLSIQALLSSPE 114 (149)
T ss_dssp TCBBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCC
T ss_pred CCEEechhcC---CCCCCCCcHHHHHHHHHHHHhCCC
Confidence 899999886 789999999999999999998875
|
| >2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=215.32 Aligned_cols=115 Identities=26% Similarity=0.616 Sum_probs=107.3
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
.+++.+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +|
T Consensus 19 ~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~--i~ 96 (216)
T 2pwq_A 19 FQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTK--IW 96 (216)
T ss_dssp CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CC
T ss_pred cccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCC--Cc
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred cCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCC
Q psy818 83 KTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122 (214)
Q Consensus 83 h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v 122 (214)
||| |.||++++. ++|++.+++..++.+++.+|.++++
T Consensus 97 HPNI~~~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp 138 (216)
T 2pwq_A 97 HPNISSQTGAICLDVLK---NEWSPALTIRTALLSIQALLSDPQP 138 (216)
T ss_dssp BTTBCTTTCBBCCHHHH---HHCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred CCCCcCCCCEEEchhhc---ccCCCCCcHHHHHHHHHHHHhCCCC
Confidence 986 789999875 6799999999999999999988753
|
| >2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=204.95 Aligned_cols=115 Identities=24% Similarity=0.476 Sum_probs=104.0
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNP-----ANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
|++.+.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 356789999999999999999999998764 489999999999999999999999999999999999999999999
Q ss_pred CceecCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 79 NGRFKTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 79 ~~~~h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
+|||| |.+|++++.. .+.|++.+++..++.+++.+|.+++
T Consensus 81 --i~HPnv~~~G~iCl~iL~~-~~~W~p~~~i~~vl~~i~~ll~~p~ 124 (157)
T 2gjd_A 81 --FYHPNVYPSGTICLSILNE-DQDWRPAITLKQIVLGVQDLLDSPN 124 (157)
T ss_dssp --CCCTTBCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHTSCC
T ss_pred --CccCCCCCCCcEeeecccC-CCCCCCCCcHHHHHHHHHHHHhCCC
Confidence 89987 8999998863 2479999999999999999997754
|
| >2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-32 Score=205.51 Aligned_cols=117 Identities=29% Similarity=0.541 Sum_probs=105.6
Q ss_pred CCCchHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEE
Q psy818 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNP-----ANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMI 76 (214)
Q Consensus 2 ~~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 76 (214)
+.|++.+.+||++|+++|++++++|+.+.+.+ +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.
T Consensus 2 ~~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 2 SHMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE 81 (161)
T ss_dssp --CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred CcccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence 35677899999999999999999999998763 6899999999999999999999999999999999999999999
Q ss_pred cCCceecCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 77 TPNGRFKTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 77 t~~~~~h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|+ +|||| |.+|++++.. .+.|++.+++..++..++.+|.+++
T Consensus 82 t~--i~HPnv~~~G~iCl~iL~~-~~~W~p~~~i~~vl~~i~~ll~~p~ 127 (161)
T 2grr_A 82 PP--LFHPNVYPSGTVCLSILEE-DKDWRPAITIKQILLGIQELLNEPN 127 (161)
T ss_dssp SC--CCSTTBCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred cC--cccCCCCCCCeEeehhcCC-CCCcCCCCcHHHHHHHHHHHHhCCC
Confidence 99 89987 8999998763 3589999999999999999998764
|
| >3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A | Back alignment and structure |
|---|
Probab=99.98 E-value=5.7e-32 Score=208.37 Aligned_cols=111 Identities=30% Similarity=0.702 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC
Q psy818 6 CGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN 85 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n 85 (214)
+.+.+||++|+++|++++++||.+.++++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~--i~HPN 124 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTR--IYHCN 124 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCBTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCC--Cccce
Confidence 4588999999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.||++++. ++|++.+++..++..++.+|.+++
T Consensus 125 V~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pn 161 (194)
T 3bzh_A 125 INSQGVICLDILK---DNWSPALTISKVLLSICSLLTDCN 161 (194)
T ss_dssp BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred ECCCCceechhhh---ccCCCcCcHHHHHHHHHHHHhCCC
Confidence 899999875 789999999999999999998865
|
| >1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=204.36 Aligned_cols=109 Identities=25% Similarity=0.543 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCC-CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPA-NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
+.+||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ +||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPni 79 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTK--VYHPNI 79 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSC--CCBTTB
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCC--CccCCC
Confidence 579999999999999999999999887 99999999999999999999999999999999999999999999 89986
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 80 ~~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~ 116 (149)
T 1fxt_A 80 SSVTGAICLDILK---NAWSPVITLKSALISLQALLQSPE 116 (149)
T ss_dssp CSSSCCBCCHHHH---TSCCTTCCHHHHHHHHHHHHHSCC
T ss_pred cCCCCeEeCCcCC---CCCCCCCcHHHHHHHHHHHHhCCC
Confidence 889999875 789999999999999999998865
|
| >2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-32 Score=209.27 Aligned_cols=111 Identities=26% Similarity=0.538 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHHHHhcCCC-------------CCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCe
Q psy818 6 CGATARLKQDYMKLKKDPI-------------PYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPS 72 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~-------------~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~ 72 (214)
+.+.+||++|+++|+++++ .||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~ 110 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK 110 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence 4588999999999999887 799999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCceecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 73 IYMITPNGRFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 73 v~f~t~~~~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|+|.|+ +|||| |.||++++. ++|++.+++..++.+++.+|.+++
T Consensus 111 V~F~T~--i~HPNI~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pn 159 (193)
T 2f4z_A 111 MKFVTK--IWHPNISSQTGAICLDILK---HEWSPALTIRTALLSIQAMLADPV 159 (193)
T ss_dssp EEESSC--CCBTTBCTTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCC
T ss_pred EEEecC--CccCCCcCCCCEEECcccc---ccCCCCCCHHHHHHHHHHHHhCCC
Confidence 999999 89986 789999875 679999999999999999998865
|
| >3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-32 Score=209.68 Aligned_cols=114 Identities=27% Similarity=0.527 Sum_probs=104.5
Q ss_pred CchHHHHHHHHHHHHHhcCC---CCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCc
Q psy818 4 KHCGATARLKQDYMKLKKDP---IPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNG 80 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~---~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~ 80 (214)
|++.+.+||++|+++|++++ +.|+++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~-- 79 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK-- 79 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccC--
Confidence 56678999999999999873 6799999999999999999999999999999999999999999999999999999
Q ss_pred eecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCC
Q psy818 81 RFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122 (214)
Q Consensus 81 ~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v 122 (214)
+|||| |.||++++. ++|++.+++..++.+++.+|.++++
T Consensus 80 i~HPnv~~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~p~p 123 (201)
T 3k9o_A 80 IWHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEP 123 (201)
T ss_dssp CCBTTBCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred cccCCCcCCCCeeeCcccc---cCCCCCCCHHHHHHHHHHHhcCCCC
Confidence 89986 889999875 7899999999999999999988763
|
| >2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-32 Score=200.92 Aligned_cols=113 Identities=19% Similarity=0.280 Sum_probs=100.6
Q ss_pred CchHHHHHHHHHHHHHhcCCCCC-eEEee-cCCC--cccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCC
Q psy818 4 KHCGATARLKQDYMKLKKDPIPY-VIAEP-NPAN--ILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPN 79 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~-~~~~~-~~~~--~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~ 79 (214)
....+.+||++|+++|++++++| +++.+ +++| +++|+++|.||++||||||.|+++|.||++||++||+|+|.|+
T Consensus 22 v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~- 100 (160)
T 2a4d_A 22 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK- 100 (160)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC-
T ss_pred eechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecC-
Confidence 44679999999999999998888 77876 4554 8999999999999999999999999999999999999999999
Q ss_pred ceecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhcc
Q psy818 80 GRFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119 (214)
Q Consensus 80 ~~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~ 119 (214)
+|||| |.+|+++++.. ++|++.+++..++.+++.+|.+
T Consensus 101 -i~HPNV~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~ 143 (160)
T 2a4d_A 101 -INMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMS 143 (160)
T ss_dssp -CCCTTBCTTTCBBCGGGSHHH-HTCCTTCCHHHHHHHHHHHHTS
T ss_pred -ceeCCEECCCCEEehhhcCCc-cCCCccCcHHHHHHHHHHHHcc
Confidence 88875 88999877532 6799999999999999998854
|
| >1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=199.74 Aligned_cols=110 Identities=26% Similarity=0.609 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEE-eecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC
Q psy818 7 GATARLKQDYMKLKKDPIPYVIA-EPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~-~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n 85 (214)
.+.+||++|+++|++++++|+.+ .++++|+++|+++|. |++|||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPn 80 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTK--IYHPN 80 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSC--CCBTT
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCC--CccCc
Confidence 57899999999999999999999 788999999999999 999999999999999999999999999999999 89986
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|+++++ .++|++.+++..++.+++.+|.+++
T Consensus 81 V~~~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~ 118 (155)
T 1wzv_A 81 VDENGQICLPIIS--SENWKPCTKTCQVLEALNVLVNRPN 118 (155)
T ss_dssp BCTTCBCCCGGGC--TTTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCeEeecCCC--ccCCCCCCcHHHHHHHHHHHHhCCC
Confidence 899999874 4789999999999999999998765
|
| >2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=200.66 Aligned_cols=114 Identities=20% Similarity=0.500 Sum_probs=101.6
Q ss_pred CchHHHHHHHHHHHHHhc-C-C------CC---CeEEee-cCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCC
Q psy818 4 KHCGATARLKQDYMKLKK-D-P------IP---YVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPP 71 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~-~-~------~~---~~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP 71 (214)
|++.+.+||++|+++|++ + + +. ++.+.+ +++|+++|+++|.||++|||+||.|+|+|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 457899999999999998 5 3 33 467777 7889999999999999999999999999999999999999
Q ss_pred eEEEEc-CCceecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 72 SIYMIT-PNGRFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 72 ~v~f~t-~~~~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
+|+|.| + +|||| |.+|++++. .++|++.+++..++.+++.+|.+++
T Consensus 83 ~v~f~t~~--i~HPni~~~~G~iCl~iL~--~~~W~p~~~i~~vL~si~~ll~~p~ 134 (172)
T 2y9m_A 83 KISFMQNN--ILHCNVKSATGEICLNILK--PEEWTPVWDLLHCVHAVWRLLREPV 134 (172)
T ss_dssp EEEECTTS--CCCTTEETTTTEECCGGGS--TTTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred EEEEeeCC--eecCCCcCCCCEEeccccC--CCCCCCcCcHHHHHHHHHHHHhCCC
Confidence 999999 8 89987 789999874 4789999999999999999998865
|
| >2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=197.25 Aligned_cols=113 Identities=19% Similarity=0.302 Sum_probs=101.9
Q ss_pred CCchHHHHHHHHHHHHHhcC-CCCCeEEeecC-C--CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 3 SKHCGATARLKQDYMKLKKD-PIPYVIAEPNP-A--NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
..+..+.+||++|+++|+++ +++|+++.+.+ + |+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~ 96 (156)
T 2q0v_A 17 QGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTK 96 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcc
Confidence 45567899999999999998 78899998853 3 59999999999999999999999999999999999999999999
Q ss_pred CceecCC----Cce---eeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 79 NGRFKTN----TRL---CLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 79 ~~~~h~n----g~i---c~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
+|||| |.+ |+++++ +|++.+++..++.+++.+|.+++
T Consensus 97 --i~HPNV~~~G~icisCL~iL~----~WsP~~ti~~vL~sI~~ll~~Pn 140 (156)
T 2q0v_A 97 --IEMSCVDNCGRVIKNNLHILK----NWNRNYTIETILISLRQEMLSSA 140 (156)
T ss_dssp --CCCTTBCTTSBBCGGGSHHHH----TCCTTCCHHHHHHHHHHHTTSTT
T ss_pred --cccCCCccCCeEehhhccccc----CCCCcCcHHHHHHHHHHHHhCCC
Confidence 89987 899 777764 59999999999999999998765
|
| >3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=210.27 Aligned_cols=115 Identities=27% Similarity=0.527 Sum_probs=106.4
Q ss_pred CCchHHHHHHHHHHHHHhcC---CCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCC
Q psy818 3 SKHCGATARLKQDYMKLKKD---PIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPN 79 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~ 79 (214)
.|++.+.+||++||++|+++ ++.||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 53 ~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~- 131 (253)
T 3e46_A 53 DMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK- 131 (253)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC-
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCC-
Confidence 35678999999999999987 46799999999999999999999999999999999999999999999999999999
Q ss_pred ceecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCC
Q psy818 80 GRFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122 (214)
Q Consensus 80 ~~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v 122 (214)
+|||| |.||++++. ++|++.+++..++..++.+|.++++
T Consensus 132 -i~HPNV~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp 175 (253)
T 3e46_A 132 -IWHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEP 175 (253)
T ss_dssp -CCBTTBCTTTCBBCCGGGT---TCCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred -CccCCccCCCCeeeccccc---CCCCCCCCHHHHHHHHHHHhcCCCC
Confidence 89986 889999875 7899999999999999999988763
|
| >3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-31 Score=199.06 Aligned_cols=114 Identities=19% Similarity=0.364 Sum_probs=104.1
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCeEEeec-CCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCce
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPYVIAEPN-PANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGR 81 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~-~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~ 81 (214)
...+.+.+||++|+++|++++++||++.+. ++|++.|+++| ||++|||+||.|+|+|.||++||++||+|+|.|+ +
T Consensus 10 ~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i 86 (167)
T 3fn1_B 10 RRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTK--I 86 (167)
T ss_dssp CCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSC--C
T ss_pred cchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCC--c
Confidence 455789999999999999999999999854 67899999999 8999999999999999999999999999999999 8
Q ss_pred ecCC----CceeeecCCCC---CCCCcCcccHHHHHHHHHHhhcc
Q psy818 82 FKTN----TRLCLSMSDFH---PDTWNPAWSVSTILTGLLSFMVE 119 (214)
Q Consensus 82 ~h~n----g~ic~~~l~~~---~e~w~~~~~vn~~l~a~~~~m~~ 119 (214)
|||| |.||++++... .++|++.+++..++.+++.+|.+
T Consensus 87 ~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~ 131 (167)
T 3fn1_B 87 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTD 131 (167)
T ss_dssp CCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTT
T ss_pred ccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcC
Confidence 9987 89999987642 46899999999999999999987
|
| >1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=193.94 Aligned_cols=111 Identities=17% Similarity=0.253 Sum_probs=97.1
Q ss_pred chHHHHHHHHHHHHHhcC-CCCCeEEeecC-C--CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCc
Q psy818 5 HCGATARLKQDYMKLKKD-PIPYVIAEPNP-A--NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNG 80 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~ 80 (214)
+..+.+||++|+++|+++ +++|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 4 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-- 81 (138)
T 1jat_B 4 KVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK-- 81 (138)
T ss_dssp CCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC--
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc--
Confidence 457889999999999998 78899998853 3 59999999999999999999999999999999999999999999
Q ss_pred eecCC-----Cce--eeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 81 RFKTN-----TRL--CLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 81 ~~h~n-----g~i--c~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
+|||| |.+ |+++++ +|++.+++..++.+++.+|.+++
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~----~W~p~~~i~~vl~~i~~ll~~pn 125 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR----DWKRAYTMETLLLDLRKEMATPA 125 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH----TCCTTCCHHHHHHHHHHHHTSHH
T ss_pred cccCCEeCCCCEEeeecccCC----CCCCcCcHHHHHHHHHHHHcCCC
Confidence 89986 677 787753 79999999999999999987753
|
| >1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=195.96 Aligned_cols=109 Identities=21% Similarity=0.495 Sum_probs=100.8
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAE-PNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
.+.+.+||++|+++| ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|+ +||
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~H 78 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM--VYH 78 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSC--CCB
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecC--Ccc
Confidence 467899999999999 467899998 7889999999998 9999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 79 Pnv~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~Pn 117 (160)
T 1y8x_A 79 PNIDLEGNVCLNILR---EDWKPVLTINSIIYGLQYLFLEPN 117 (160)
T ss_dssp TTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CcCCCCCeEEcccch---hhccCCCCHHHHHHHHHHHHhCCC
Confidence 87 899999886 789999999999999999998865
|
| >2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=198.67 Aligned_cols=110 Identities=21% Similarity=0.467 Sum_probs=101.7
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAE-PNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
.++.+.+||++|+++| ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|+ +|
T Consensus 23 ~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~--i~ 97 (180)
T 2nvu_C 23 KASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM--VY 97 (180)
T ss_dssp SCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSC--CC
T ss_pred CccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceecc--Cc
Confidence 4567999999999999 567899998 7889999999998 9999999999999999999999999999999999 89
Q ss_pred cCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 83 KTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 83 h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
||| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 98 HPNV~~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~Pn 137 (180)
T 2nvu_C 98 HPNIDLEGNVALNILR---EDWKPVLTINSIIYGLQYLFLEPN 137 (180)
T ss_dssp BTTBCTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCC
T ss_pred cCCCCCCCcEEccccc---ccCCCCCCHHHHHHHHHHHHhCCC
Confidence 987 899999886 789999999999999999998765
|
| >1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=208.19 Aligned_cols=111 Identities=25% Similarity=0.555 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCC-CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPA-NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n 85 (214)
++.+||++|+++|++++++||++.+.++ ++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ +||||
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~--i~HPN 79 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTK--VYHPN 79 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTT--CCCSS
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCC--CccCc
Confidence 4689999999999999999999998876 56799999999999999999999999999999999999999999 89986
Q ss_pred -----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCC
Q psy818 86 -----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122 (214)
Q Consensus 86 -----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v 122 (214)
|.||++++. ++|++.+++..++.+++.+|.++++
T Consensus 80 I~~~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp 118 (215)
T 1tte_A 80 ISSVTGAICLDILR---NAWSPVITLKSALISLQALLQSPEP 118 (215)
T ss_dssp SCSSSSCCCSSTTT---CCSCTTCCHHHHHHHHHHHHTSCCC
T ss_pred CcCCCCEEECccCC---CCCCCcCcHHHHHHHHHHHHhCCCC
Confidence 889999875 7899999999999999999988663
|
| >2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=197.98 Aligned_cols=111 Identities=20% Similarity=0.289 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHHHhcCCCCC-eEEee-cCCC--cccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCce
Q psy818 6 CGATARLKQDYMKLKKDPIPY-VIAEP-NPAN--ILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGR 81 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~-~~~~~-~~~~--~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~ 81 (214)
..+.+||++|+++|++++++| +++.+ +++| +++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~--i 111 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK--I 111 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBC--C
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecc--c
Confidence 458999999999999998888 67776 4554 9999999999999999999999999999999999999999999 8
Q ss_pred ecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhcc
Q psy818 82 FKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119 (214)
Q Consensus 82 ~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~ 119 (214)
|||| |.+|+++++.. +.|++.+++..++.+++.+|.+
T Consensus 112 ~HPNV~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~ 153 (170)
T 2hlw_A 112 NMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMS 153 (170)
T ss_dssp CCSSBCSSSCBBCTTTCHHH-HTCCSSCCHHHHHHHHHHHHHS
T ss_pred ccCCEeCCCCEEEhhhcCCC-CCCCccCcHHHHHHHHHHHHcc
Confidence 8875 88999876532 6899999999999999998865
|
| >1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=197.79 Aligned_cols=115 Identities=17% Similarity=0.398 Sum_probs=105.6
Q ss_pred CCchHHHHHHHHHHHHHhcCC---CCCeEEeecCCCcccEEEEEECC-CCCCCCC-----------cEEEEEEECCCCCC
Q psy818 3 SKHCGATARLKQDYMKLKKDP---IPYVIAEPNPANILEWFYVVIGP-ENTQYEG-----------GMYLGKLVFPRDFP 67 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~---~~~~~~~~~~~~~~~w~~~i~gp-~~t~y~g-----------g~f~~~i~fp~~YP 67 (214)
.++..+.+||++||++|++++ +.++++.++++|+++|+++|.|| ++|||+| |.|+|+|.||++||
T Consensus 23 ~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 23 SGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp -CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 466789999999999999988 67899999999999999999998 9999998 89999999999999
Q ss_pred CCCCeEEEEcCCceecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 68 FKPPSIYMITPNGRFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 68 ~~pP~v~f~t~~~~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
++||+|+|.|| +|||| |.||++++. .+.|++.+++..++.+++.+|.++.
T Consensus 103 ~~PP~V~f~tp--i~hPnnV~~~G~ICL~iL~--~~~WsP~~ti~~VL~sI~slL~~p~ 157 (186)
T 1zuo_A 103 FDPPFVRVVLP--VLSGGYVLGGGALCMELLT--KQGWSSAYSIESVIMQINATLVKGK 157 (186)
T ss_dssp SSCCEEEEEES--CEESTTBCGGGBBCCGGGS--TTTCCTTSCHHHHHHHHHHHHHHTT
T ss_pred CCCCeEEEeCC--ccCCCccCCCCcEEeccCC--CCCCCCcCcHHHHHHHHHHHHcCCC
Confidence 99999999999 89984 899999874 3689999999999999999998876
|
| >1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-30 Score=192.61 Aligned_cols=110 Identities=25% Similarity=0.603 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAE-PNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n 85 (214)
.+.+||++|+++|++++++|+.+. ++++|+++|+++|. |++|||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~--i~HPn 78 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTK--IYHPN 78 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSC--CCCTT
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCC--Ccccc
Confidence 467899999999999999999865 46789999999998 999999999999999999999999999999999 89986
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. .++|++.+++..++.+++.+|.+++
T Consensus 79 v~~~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~ 116 (154)
T 1c4z_D 79 IDEKGQVCLPVIS--AENWKPATKTDQVIQSLIALVNDPQ 116 (154)
T ss_dssp BCTTCBBCCTTTS--SSSCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEECCCCC--CCCCCCCCcHHHHHHHHHHHHcCCC
Confidence 899999874 3789999999999999999998765
|
| >4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-30 Score=196.37 Aligned_cols=110 Identities=24% Similarity=0.482 Sum_probs=98.0
Q ss_pred CCchHHHHHHHHHHHHHhcCC------------CCCeEEeecCCCcccEEEEEECCCCCCCC--CcEEEEEEECCCCCCC
Q psy818 3 SKHCGATARLKQDYMKLKKDP------------IPYVIAEPNPANILEWFYVVIGPENTQYE--GGMYLGKLVFPRDFPF 68 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~------------~~~~~~~~~~~~~~~w~~~i~gp~~t~y~--gg~f~~~i~fp~~YP~ 68 (214)
.|++.+.+||++|+++|++++ +.++.+.++++|+++|+++|.||++|||+ ||.|+|+|.||++||+
T Consensus 4 ~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 4 SMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred cccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 356678999999999999977 67899999999999999999999999999 9999999999999999
Q ss_pred CCCeEEEEcCCceecCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhh
Q psy818 69 KPPSIYMITPNGRFKTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117 (214)
Q Consensus 69 ~pP~v~f~t~~~~~h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m 117 (214)
+||+|+|.|+ +|||| |.+|++++. ++|++.+++..++..++..|
T Consensus 84 ~pP~v~f~t~--i~HPnv~~~G~iCl~il~---~~W~p~~~i~~vll~~l~~l 131 (167)
T 4ds2_A 84 EPPTVRFVTP--VYSPLVTGEGGICDRMVN---DFWTPDQHASDVIKLVLDRV 131 (167)
T ss_dssp SCCEEEESSC--CCCSSCCTTSCCCTHHHH---TTCCTTSCHHHHHHHHHHHH
T ss_pred CCCEEEEeCC--cccccCCCCCEEEcccCc---CCCCCCCChHHHHHHHHHHH
Confidence 9999999999 89987 899999875 78999999997655444433
|
| >4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=213.94 Aligned_cols=112 Identities=28% Similarity=0.672 Sum_probs=106.2
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC
Q psy818 6 CGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN 85 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n 85 (214)
+.+.|||++|+++|++++++|+++.++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ +||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPn 79 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR--IYHPN 79 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSC--CCCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecc--ccccc
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v 122 (214)
|.+|++++. ++|++.+++..++.++..+|.++++
T Consensus 80 v~~~G~iCl~il~---~~W~p~~~i~~vL~~i~~ll~~pnp 117 (399)
T 4ddg_A 80 INSNGSISLDILR---SQWSPALTISKVLLSICSLLCDPNP 117 (399)
T ss_dssp BCTTCBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred cCCCCeEeCcccc---cCCCccccHHHHHHHHHHHHcCCCC
Confidence 899999874 7899999999999999999988763
|
| >2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=193.17 Aligned_cols=107 Identities=25% Similarity=0.497 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
++.+||++|+++|+++ |+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ +||||
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPni 76 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNK--LLHPNV 76 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCCTTB
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecC--CccCcC
Confidence 3568999999999874 67788889999999999999999999999999999999999999999999999 89986
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHH-HHhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGL-LSFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~-~~~m~~~~ 121 (214)
|.+|++++. +.|++.+++..++..+ ..+|.+++
T Consensus 77 ~~~~G~iCl~il~---~~W~p~~~i~~vl~~ii~~Ll~~Pn 114 (152)
T 2onu_A 77 DEASGSVCLDVIN---QTWTPLYSLVNVFEVFLPQLLTYPN 114 (152)
T ss_dssp CTTTCBBCHHHHH---HHCCTTCCHHHHHHTHHHHHHHSCC
T ss_pred cCcCCeEeccccc---ccCCCCCCHHHHHHHHHHHHHhCCC
Confidence 789999875 6799999999988884 46666554
|
| >3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-29 Score=203.56 Aligned_cols=120 Identities=26% Similarity=0.498 Sum_probs=105.9
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCC----eEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPY----VIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~----~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
.+++.+.+||++|+++|++++++| +.+.++++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 72 ~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~ 151 (323)
T 3ceg_A 72 ANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETT 151 (323)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCS
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEecc
Confidence 367789999999999999987764 5567889999999999999999999999999999999999999999999998
Q ss_pred Cc---eecCC----CceeeecCCCC----CCCCcCcc-cHHHHHHHHHHhhccCCC
Q psy818 79 NG---RFKTN----TRLCLSMSDFH----PDTWNPAW-SVSTILTGLLSFMVERSP 122 (214)
Q Consensus 79 ~~---~~h~n----g~ic~~~l~~~----~e~w~~~~-~vn~~l~a~~~~m~~~~v 122 (214)
++ +|||| |.||++++... .++|++.+ ++..++..++.+|....+
T Consensus 152 ~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~P 207 (323)
T 3ceg_A 152 GGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEP 207 (323)
T ss_dssp TTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSG
T ss_pred CCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCC
Confidence 54 89998 99999988531 36899999 899999999999875443
|
| >3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-29 Score=191.92 Aligned_cols=111 Identities=29% Similarity=0.513 Sum_probs=102.2
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCeEEe----ecCCCcc---cEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEE
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPYVIAE----PNPANIL---EWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYM 75 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~~~~~----~~~~~~~---~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f 75 (214)
...+.+.+||++||++|+ +++|+++. ++++|++ +|+++|. |++|||+||.|+|+|.||++||++||+|+|
T Consensus 25 ~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f 101 (190)
T 3o2u_A 25 PNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVC 101 (190)
T ss_dssp CCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEE
T ss_pred CCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEE
Confidence 345789999999999998 67899987 7889999 9999997 888999999999999999999999999999
Q ss_pred EcCCceecCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 76 ITPNGRFKTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 76 ~t~~~~~h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
.|+ +|||| |.+|++++. ++|++.+++..++.+++.+|.+++
T Consensus 102 ~t~--i~HPnV~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn 146 (190)
T 3o2u_A 102 LKK--IFHPNIDLKGNVCLNILR---EDWSPALDLQSIITGLLFLFLEPN 146 (190)
T ss_dssp CSC--CCCTTBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred ecC--cccCCCCCCCeEechhcc---CCCCCCCCHHHHHHHHHHHHhCCC
Confidence 999 89987 899999886 789999999999999999998865
|
| >2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-30 Score=194.11 Aligned_cols=106 Identities=25% Similarity=0.526 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
.+.+||++|+++|++ .|+++.+. +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~--i~HPNV 98 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNK--IFHPNI 98 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCBTTB
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecC--CccCcC
Confidence 589999999999985 46777776 578999999999999999999999999999999999999999998 88875
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHH-HHHhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTG-LLSFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a-~~~~m~~~~ 121 (214)
|.+|++++. ++|++.+++..++.. +..+|.+++
T Consensus 99 ~~~~G~ICL~iL~---~~WsP~~ti~~iL~s~I~~Ll~~Pn 136 (179)
T 2z5d_A 99 DEASGTVCLDVIN---QTWTALYDLTNIFESFLPQLLAYPN 136 (179)
T ss_dssp CTTTCBBCHHHHH---HHCCTTCCTTHHHHTHHHHHHHSCC
T ss_pred CCCCCeEeccccc---cCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 889999875 689999999999998 888887765
|
| >1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=190.20 Aligned_cols=106 Identities=28% Similarity=0.567 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
.+.+||++|+++|++++. ++ ..++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~--i~HPNi 85 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNR--ILHPNV 85 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCBTTB
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecC--cccccC
Confidence 578999999999999874 44 357899999999999999999999999999999999999999999999 89986
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHHH-HhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGLL-SFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~-~~m~~~~ 121 (214)
|.+|++++. ++|++.+++..++.+++ .+|.+++
T Consensus 86 ~~~~G~iCl~iL~---~~W~p~~~i~~vL~sil~~ll~~Pn 123 (171)
T 1yf9_A 86 DERSGSVCLDVIN---QTWTPMYQLENIFDVFLPQLLRYPN 123 (171)
T ss_dssp CTTTCBBCHHHHH---HHCCTTCCTHHHHHTHHHHHHHSCC
T ss_pred cccCCeEeccccc---cCCCCCCcHHHHHHHHHHHHHhCCC
Confidence 789999875 68999999999988874 6666554
|
| >2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-24 Score=157.62 Aligned_cols=96 Identities=20% Similarity=0.315 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCc----------EEEEEEECCCCCCCCCCeEEEEc
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGG----------MYLGKLVFPRDFPFKPPSIYMIT 77 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~v~f~t 77 (214)
-.+||++|++.|++ ++.++++|++.|.+.+.||+||+|+|| .|+++|.||++||++||+|+|.+
T Consensus 33 w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~ 106 (172)
T 2z6o_A 33 WVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPE 106 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGG
T ss_pred HHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCC
Confidence 39999999999999 356778899999999999999999999 99999999999999999999988
Q ss_pred CCceecC----CCceeeecCCCC-CCCCcCcccHHHHH
Q psy818 78 PNGRFKT----NTRLCLSMSDFH-PDTWNPAWSVSTIL 110 (214)
Q Consensus 78 ~~~~~h~----ng~ic~~~l~~~-~e~w~~~~~vn~~l 110 (214)
++ +||+ +|.||++++.-. ...|.+.+++.+++
T Consensus 107 ~~-~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL 143 (172)
T 2z6o_A 107 LD-GKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLM 143 (172)
T ss_dssp GT-TTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHH
T ss_pred CC-CCCCCCCCCCcEechhhccccccccCCccCHHHHH
Confidence 53 4565 499999987211 12344999998554
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-23 Score=164.72 Aligned_cols=125 Identities=15% Similarity=0.245 Sum_probs=97.9
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
++++| |+++..++.+++.++|+.++++| .++++++|+|++++ ||++|+++. .|+++|+|+.+||
T Consensus 80 DiLVN-NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~lt 158 (242)
T 4b79_A 80 DVLVN-NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLT 158 (242)
T ss_dssp SEEEE-CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHH
T ss_pred CEEEE-CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHHHHH
Confidence 44444 66677778888889999999999 67899999998765 899999876 8999999999999
Q ss_pred hhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHhhCC---CCChHhHHHHHHHHhcCCC
Q psy818 144 FNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAHP---CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 144 ~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~~---~~~pedvA~~v~fl~s~p~ 208 (214)
++++ .|+++. |||+|+||.++|++......+... .......| +++|||||++++||+|..+
T Consensus 159 r~lA----~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a 225 (242)
T 4b79_A 159 RSLA----CEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGA 225 (242)
T ss_dssp HHHH----HHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHH----HHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 9999 889886 999999999999998765444332 33333333 5699999999999998653
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-23 Score=164.74 Aligned_cols=125 Identities=18% Similarity=0.228 Sum_probs=98.7
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++| |+++. .++++++.++|+.++++| .++|+++|+|++++ ||++|+++. .|+++|+|+
T Consensus 81 DiLVN-NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav 159 (247)
T 4hp8_A 81 DILVN-NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGV 159 (247)
T ss_dssp CEEEE-CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred CEEEE-CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHH
Confidence 44555 54443 357888899999999999 67899999997542 899999876 899999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
.+||++++ .|+++. |||+|+||.++|++.+....+... ....... ++++|||||++++||+|..+
T Consensus 160 ~~ltr~lA----~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a 230 (247)
T 4hp8_A 160 AGLTKLLA----NEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAA 230 (247)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGG
T ss_pred HHHHHHHH----HHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999 888886 999999999999988654433332 2222233 35699999999999999643
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.1e-22 Score=159.11 Aligned_cols=125 Identities=18% Similarity=0.215 Sum_probs=98.3
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++| |+++. .++.+++.++|+.++++| .++++++|+|++++ ||++|+++. .|+++|+|+
T Consensus 86 DiLVN-NAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal 164 (254)
T 4fn4_A 86 DVLCN-NAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGL 164 (254)
T ss_dssp CEEEE-CCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHH
T ss_pred CEEEE-CCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHH
Confidence 44455 44443 357788889999999999 77999999998765 899999976 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchh--hHhHHhh----CCCCChHhHHHHHHHHhcCCC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF--DKSLYEA----HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~--~~~~~~~----~~~~~pedvA~~v~fl~s~p~ 208 (214)
.+|+++++ .|+++. |||+|+||.++|++......... ....... .++++|||||++|+||+|..+
T Consensus 165 ~~ltr~lA----~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a 237 (254)
T 4fn4_A 165 IGLTRSIA----AHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEA 237 (254)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHH----HHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999 888887 99999999999998765433221 1222221 346699999999999999643
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.3e-22 Score=158.74 Aligned_cols=125 Identities=16% Similarity=0.243 Sum_probs=97.8
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++| |+++. .++.+++.++|+.++++| .++++++|+|.++ + +|++|+++. .|+++|+|+
T Consensus 88 DiLVN-NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal 166 (255)
T 4g81_D 88 DILIN-NAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGI 166 (255)
T ss_dssp CEEEE-CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHH
T ss_pred cEEEE-CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHH
Confidence 33444 44443 357788899999999999 6789999999643 2 899999977 899999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHh-HHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKS-LYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~-~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
.+|+++++ .|+++. |||+|+||.++|++......++...+ .... .++++|||||++++||+|..+
T Consensus 167 ~~ltr~lA----~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a 237 (255)
T 4g81_D 167 KMLTCSMA----AEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKAS 237 (255)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHHHH----HHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999 888886 99999999999998865444333222 2222 235699999999999998643
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-21 Score=154.50 Aligned_cols=121 Identities=19% Similarity=0.160 Sum_probs=93.5
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++| |+++. .++.+++.++|+.++++| .++++++|+|++++ +|++|+++. .|+++|+|+.+
T Consensus 77 DiLVN-NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~ 155 (247)
T 3ged_A 77 DVLVN-NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVA 155 (247)
T ss_dssp CEEEE-CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEE-CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence 44455 44443 347788889999999999 67899999998765 899999876 89999999999
Q ss_pred HHhhccCcchhhhCcc-cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 142 LRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
|+++++ .|++|+ |||+|+||+++|++.+... + .........++++|||||++++||+|.
T Consensus 156 ltk~lA----~ela~~IrVN~I~PG~i~t~~~~~~~-~-~~~~~~Pl~R~g~pediA~~v~fL~s~ 215 (247)
T 3ged_A 156 LTHALA----MSLGPDVLVNCIAPGWINVTEQQEFT-Q-EDCAAIPAGKVGTPKDISNMVLFLCQQ 215 (247)
T ss_dssp HHHHHH----HHHTTTSEEEEEEECSBCCCC---CC-H-HHHHTSTTSSCBCHHHHHHHHHHHHHC
T ss_pred HHHHHH----HHHCCCCEEEEEecCcCCCCCcHHHH-H-HHHhcCCCCCCcCHHHHHHHHHHHHhC
Confidence 999999 888877 9999999999998765322 1 111122233467999999999999984
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-21 Score=156.96 Aligned_cols=115 Identities=19% Similarity=0.231 Sum_probs=88.8
Q ss_pred eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 90 LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 90 ~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
.++.+++.++|+.++++| .++++++|+|++.+ +|++|+++. .|+++|+|+.+|+++++ .|++
T Consensus 117 ~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~lA----~Ela 192 (273)
T 4fgs_A 117 LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWI----LDLK 192 (273)
T ss_dssp CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHH----HHTT
T ss_pred CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHH----HHhc
Confidence 358888999999999999 77999999998776 899999876 89999999999999999 8888
Q ss_pred cc--cccccCccchhhhhccccCCchh------hHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 156 PD--LVQSISPGLVKSQIFKSSLGDKF------DKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 156 ~~--~vn~v~pg~~~t~~~~~~~~~~~------~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+. |||+|+||.++|++......... ........ ++++|||||++|+||+|..+
T Consensus 193 ~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a 256 (273)
T 4fgs_A 193 DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDS 256 (273)
T ss_dssp TSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 86 99999999999998765432211 11122222 35699999999999998643
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.1e-21 Score=154.18 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=93.8
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++| |+++.. ..++.+.++|+.++++| .++++++|+|++++ ||++|+++. .|+++|+|+.+|
T Consensus 85 DiLVN-nAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~l 163 (258)
T 4gkb_A 85 DGLVN-NAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLAL 163 (258)
T ss_dssp CEEEE-CCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHHHHHHHH
T ss_pred CEEEE-CCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHHHHHHHH
Confidence 44455 444432 35577788999999999 67899999997654 899999976 899999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCC-----chhhHhHHhhC----CCCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG-----DKFDKSLYEAH----PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~-----~~~~~~~~~~~----~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++ .|+++. |||+|+||.++|++...... +.......... ++++|||||++|+||+|..+
T Consensus 164 tr~lA----~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a 236 (258)
T 4gkb_A 164 TREWA----VALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRA 236 (258)
T ss_dssp HHHHH----HHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHH----HHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999 888876 99999999999998765332 11122222222 35699999999999998643
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.2e-20 Score=150.75 Aligned_cols=126 Identities=19% Similarity=0.199 Sum_probs=94.5
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a 138 (214)
++++|+.|... .++.+++.++|+.++++| .++++++|+|++++ +|++|+++. .|+++|+|
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaa 159 (261)
T 4h15_A 80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAA 159 (261)
T ss_dssp SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHH
T ss_pred CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHH
Confidence 44555444221 247788889999999999 67999999998765 899998764 69999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccC---------CchhhHh----HHhh---CCCCChHhHHHHH
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---------GDKFDKS----LYEA---HPCLQAEDIANTV 200 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---------~~~~~~~----~~~~---~~~~~pedvA~~v 200 (214)
+.+|+++++ .|+++. |||+|+||.++|++..... ..+...+ .... .++++|||||++|
T Consensus 160 l~~lt~~lA----~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v 235 (261)
T 4h15_A 160 LSTYSKAMS----KEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLI 235 (261)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHH----HHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence 999999999 888886 9999999999999764321 0111111 1111 2356999999999
Q ss_pred HHHhcCCC
Q psy818 201 EFILSSPP 208 (214)
Q Consensus 201 ~fl~s~p~ 208 (214)
+||+|..+
T Consensus 236 ~fLaS~~a 243 (261)
T 4h15_A 236 AFLASDRA 243 (261)
T ss_dssp HHHHSGGG
T ss_pred HHHhCchh
Confidence 99998543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-19 Score=144.98 Aligned_cols=113 Identities=18% Similarity=0.135 Sum_probs=88.6
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD 157 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~ 157 (214)
+.+.+.++|...+++| .+++.+.++|.+.| +|++|+++. .|+++|+|+.+|+++++ .|++|.
T Consensus 106 ~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA----~Ela~~ 181 (256)
T 4fs3_A 106 FSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLA----LDLGPD 181 (256)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHH----HHHGGG
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHHHHHHHHHHHHHHH----HHhCcc
Confidence 4556667888888888 45677777777666 899999876 89999999999999999 888886
Q ss_pred --cccccCccchhhhhccccCCchhh-HhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 158 --LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 158 --~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
|||+|+||.++|++.......+.. ....... ++++|||||++++||+|..+
T Consensus 182 gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a 238 (256)
T 4fs3_A 182 NIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLS 238 (256)
T ss_dssp TEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred CeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 999999999999988765433322 2222333 35699999999999998643
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.2e-17 Score=133.55 Aligned_cols=131 Identities=18% Similarity=0.308 Sum_probs=99.5
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~ 168 (266)
T 3p19_A 89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHA 168 (266)
T ss_dssp EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHH
Confidence 34566444222 246667778999999999 67899999997653 899998866 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHh----HHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKS----LYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~----~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
++++++ .++.+. +||+|+||.++|++............ .......++|||||++++||++.++++.+.
T Consensus 169 ~~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~ 242 (266)
T 3p19_A 169 ISENVR----EEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIR 242 (266)
T ss_dssp HHHHHH----HHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred HHHHHH----HHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCccce
Confidence 999999 777654 99999999999998765433221111 112334679999999999999999887664
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-17 Score=134.09 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=90.0
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C--CCCCCCcCc-------HHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S--PTLGSIEMS-------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~--v~i~S~a~~-------~Y~a~K~a 138 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|+++ + ++++|.++. .|+++|+|
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 183 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHA 183 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHH
Confidence 44666544321 356677888999999999 6789999999764 2 789998876 79999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchh-hHhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF-DKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
+.+++++++ .++.+. +||+|+||.++|++......... ........++++|||||++++||+|.|.+..+.
T Consensus 184 ~~~l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~ 257 (272)
T 4dyv_A 184 ITGLTKSTS----LDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQ 257 (272)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHHHHSCTTSCCC
T ss_pred HHHHHHHHH----HHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCccc
Confidence 999999999 777654 99999999999998754322111 111112233679999999999999999887765
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-17 Score=134.87 Aligned_cols=129 Identities=19% Similarity=0.261 Sum_probs=98.0
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.
T Consensus 117 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~ 196 (287)
T 3rku_A 117 DILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVG 196 (287)
T ss_dssp CEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHHHHHHH
Confidence 4466654422 2346677788999999999 67899999997643 899999866 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCC-c-hhhHhHHhhCCCCChHhHHHHHHHHhcCCCccc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG-D-KFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQ 211 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~-~-~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~ 211 (214)
+++++++ .|+.+. +||+|+||.++|++...... . ...........+++|||||++++||+|.+++..
T Consensus 197 ~l~~~la----~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~~~i 267 (287)
T 3rku_A 197 AFTDSLR----KELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTV 267 (287)
T ss_dssp HHHHHHH----HHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCTTEE
T ss_pred HHHHHHH----HHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCCCeE
Confidence 9999999 777654 99999999999998643221 1 122233334456799999999999999887654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-17 Score=135.52 Aligned_cols=131 Identities=15% Similarity=0.155 Sum_probs=94.8
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C--CCCCCCcCc-------HHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S--PTLGSIEMS-------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~--v~i~S~a~~-------~Y~a~K~a 138 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|+++ + ++++|.++. .|+++|+|
T Consensus 113 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 192 (281)
T 4dry_A 113 DLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHA 192 (281)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHHH
Confidence 45666544322 346677788999999999 6789999999764 2 889998865 79999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
+.+++++++ .|+.+. +||+|+||.++|++.......... .......+.++|||||++++||+|.|.+..+.
T Consensus 193 ~~~l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~ 266 (281)
T 4dry_A 193 ITGLTKSTA----LDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVL 266 (281)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred HHHHHHHHH----HHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCccCccc
Confidence 999999999 777654 999999999999987543221110 11112234679999999999999999887654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-17 Score=133.23 Aligned_cols=130 Identities=20% Similarity=0.254 Sum_probs=88.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 162 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRA 162 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHH
Confidence 44666544322 246677778999999999 67899999997643 899999865 79999999999
Q ss_pred HHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhH-HhhCCCCChHhHHHHHHHHhcCCCcccc
Q psy818 142 LRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSL-YEAHPCLQAEDIANTVEFILSSPPHVQV 212 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~pedvA~~v~fl~s~p~~~~i 212 (214)
++++++ .++.+.|||+|+||.++|++............. .....+++|||||++++||+|.+++...
T Consensus 163 l~~~la----~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~~ 230 (264)
T 3tfo_A 163 ISDGLR----QESTNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQSVDT 230 (264)
T ss_dssp HHHHHH----HHCSSEEEEEEEECCC-----------------------CCCHHHHHHHHHHHHHSCTTEEE
T ss_pred HHHHHH----HhCCCCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCccCcc
Confidence 999999 666344999999999999987543222111110 0112257999999999999999987643
|
| >3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.8e-17 Score=118.78 Aligned_cols=88 Identities=27% Similarity=0.531 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCc----------EEEEEEECCCCCCCCCCeEEEE
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGG----------MYLGKLVFPRDFPFKPPSIYMI 76 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~v~f~ 76 (214)
.=..||.+||..|.+ ++..++++-..|...+.||.||+|+|+ .|.++++||.+||++||.|+|.
T Consensus 34 ~w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp 107 (168)
T 3kpa_A 34 KWTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALP 107 (168)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecc
Confidence 356899999999976 234455566789999999999999999 9999999999999999999999
Q ss_pred cCCceecC----CCceeeecCCCCCCCCcCcccHH
Q psy818 77 TPNGRFKT----NTRLCLSMSDFHPDTWNPAWSVS 107 (214)
Q Consensus 77 t~~~~~h~----ng~ic~~~l~~~~e~w~~~~~vn 107 (214)
+.++ +|+ +|.||++++ |++.++-|
T Consensus 108 ~ldg-kt~kmYr~GkICLdIh------wkPlW~~n 135 (168)
T 3kpa_A 108 ELEG-KTVKMYRGGKICMTTH------FFPLWARN 135 (168)
T ss_dssp GGTT-TCSSEETTTEECCCTT------HHHHHHHT
T ss_pred cccC-cCccccCCCcEEeccc------cchhhHhc
Confidence 8543 555 489999873 98888877
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.1e-17 Score=129.68 Aligned_cols=125 Identities=18% Similarity=0.216 Sum_probs=94.0
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.......+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.++
T Consensus 91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 170 (256)
T 3gaf_A 91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHL 170 (256)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHH
Confidence 44666544322222266778999999999 67899999998754 899998865 899999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
+++++ .++.+. +||+|+||.++|++................. ..++|||||++++||+|..
T Consensus 171 ~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~ 236 (256)
T 3gaf_A 171 TRNIA----FDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPA 236 (256)
T ss_dssp HHHHH----HHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHH----HHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence 99999 777664 9999999999999876443332222222222 3569999999999999864
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1e-16 Score=128.90 Aligned_cols=127 Identities=16% Similarity=0.207 Sum_probs=96.7
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 163 (258)
T 3oid_A 84 DVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEA 163 (258)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence 4566755422 2346677778999999999 67899999998764 889998865 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++++++ .++.+. +||+|+||.++|++......... ....... ..+++|||||++++||+|..+.
T Consensus 164 l~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~ 233 (258)
T 3oid_A 164 LTRYLA----VELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKAD 233 (258)
T ss_dssp HHHHHH----HHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTT
T ss_pred HHHHHH----HHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccC
Confidence 999999 777664 99999999999998765433221 1222222 2356999999999999997643
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=7.2e-17 Score=130.52 Aligned_cols=125 Identities=13% Similarity=0.180 Sum_probs=87.5
Q ss_pred ceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHh
Q psy818 80 GRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRF 144 (214)
Q Consensus 80 ~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~ 144 (214)
+++|+.|.. ..++.+.+.++|+.++++| .+++++++.|+..+ ++++|.++. .|+++|+|+.++++
T Consensus 108 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~ 187 (267)
T 3u5t_A 108 VLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTH 187 (267)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHHHHHH
Confidence 355544422 1345667778899999999 66889999998766 889988754 89999999999999
Q ss_pred hccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 145 NLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 145 ~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++ .|+.+. +||+|+||.++|++......+......... ..+++|||||++++||+|...
T Consensus 188 ~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 252 (267)
T 3u5t_A 188 VLS----KELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDG 252 (267)
T ss_dssp HHH----HHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTT
T ss_pred HHH----HHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999 777654 999999999999987543222222222222 235699999999999999654
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=7.4e-17 Score=128.06 Aligned_cols=124 Identities=12% Similarity=0.105 Sum_probs=91.4
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.++
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 158 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGF 158 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHH
Confidence 4466654432 2246677778999999999 67899999998765 889998866 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
+++++ .|+.+. +||+|+||.++|++...... ......++|||+|++++||++.+....|+
T Consensus 159 ~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~pedvA~~v~~l~~~~~~~~i~ 220 (235)
T 3l6e_A 159 LESLR----AELKDSPLRLVNLYPSGIRSEFWDNTDH-------VDPSGFMTPEDAAAYMLDALEARSSCHVT 220 (235)
T ss_dssp HHHHH----HHTTTSSEEEEEEEEEEECCCC------------------CBCHHHHHHHHHHHTCCCSSEEEE
T ss_pred HHHHH----HHhhccCCEEEEEeCCCccCcchhccCC-------CCCcCCCCHHHHHHHHHHHHhCCCCccee
Confidence 99999 777654 99999999999998653211 11224689999999999999988776554
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.5e-16 Score=128.83 Aligned_cols=126 Identities=14% Similarity=0.197 Sum_probs=93.6
Q ss_pred CceecCCCce---eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRL---CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~i---c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|.. ...+.+.+.++|+..+++| .++++++++|++++ ++++|.++. .|+++|+|+
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 166 (271)
T 3tzq_B 87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAI 166 (271)
T ss_dssp CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHH
Confidence 4466654432 1235567778999999999 67899999998764 889998865 899999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
.+++++++ .++.+. +||+|+||.+.|++................ ...++|||||++++||+|...
T Consensus 167 ~~l~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~ 236 (271)
T 3tzq_B 167 ETLTRYVA----TQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRA 236 (271)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHH----HHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999 777664 999999999999987633332222222222 235699999999999999653
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.1e-17 Score=129.70 Aligned_cols=110 Identities=21% Similarity=0.255 Sum_probs=86.2
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD 157 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~ 157 (214)
+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+++++++ .++.+.
T Consensus 104 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la----~e~~~~ 179 (250)
T 3nyw_A 104 SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLY----RELAPL 179 (250)
T ss_dssp SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHHHHHHHHHH----HHHGGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHHHHHHHHHH----HHhhhc
Confidence 55667899999999 67899999997644 889998865 79999999999999999 777664
Q ss_pred --cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 158 --LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 158 --~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
+||+|+||.++|++........ .....++|||||++++||+|.+++..+.
T Consensus 180 gi~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~p~dva~~v~~l~s~~~~~~~~ 231 (250)
T 3nyw_A 180 GIRVTTLCPGWVNTDMAKKAGTPF------KDEEMIQPDDLLNTIRCLLNLSENVCIK 231 (250)
T ss_dssp TEEEEEEEESSBCSHHHHHTTCCS------CGGGSBCHHHHHHHHHHHHTSCTTEECC
T ss_pred CcEEEEEecCcccCchhhhcCCCc------ccccCCCHHHHHHHHHHHHcCCCceEee
Confidence 9999999999999875432111 1123579999999999999999887664
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.1e-17 Score=129.82 Aligned_cols=129 Identities=11% Similarity=0.110 Sum_probs=85.1
Q ss_pred ceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 80 GRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 80 ~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
+++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.++
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 165 (252)
T 3h7a_A 86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAV 165 (252)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHH
Confidence 356654422 2346667778999999999 67899999997753 889998865 799999999999
Q ss_pred HhhccCcchhhhCcc--cc-cccCccchhhhhccccCCchh--hHhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 143 RFNLNDKNFCELFPD--LV-QSISPGLVKSQIFKSSLGDKF--DKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~v-n~v~pg~~~t~~~~~~~~~~~--~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
+++++ .++.+. || |+|+||.++|++......... ........ .++|||||++++||+|.++...+.
T Consensus 166 ~~~la----~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~~~ 236 (252)
T 3h7a_A 166 AQSMA----RELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAWTF 236 (252)
T ss_dssp HHHHH----HHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHHHHHHCCGGGBCS
T ss_pred HHHHH----HHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhccee
Confidence 99999 777664 99 899999999998765322211 11111112 679999999999999998876654
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-16 Score=127.07 Aligned_cols=130 Identities=22% Similarity=0.330 Sum_probs=89.3
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|+++ + +++||.++. .|+++|+|+.
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 155 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVR 155 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHH
Confidence 4466654432 1245667778899999999 6789999999754 3 889998865 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchh-hhhccccCC-ch-hhHhHHhhCCCCChHhHHHHHHHHhcCCCcccc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVK-SQIFKSSLG-DK-FDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~-t~~~~~~~~-~~-~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i 212 (214)
+++++++ .++.+. +||+|+||.++ |++...... .. ..........+++|||||++++||+|.++.++.
T Consensus 156 ~~~~~la----~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~~~~~g 228 (248)
T 3asu_A 156 QFSLNLR----TDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNI 228 (248)
T ss_dssp HHHHHHH----HHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHSCTTCCC
T ss_pred HHHHHHH----HHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCCcccee
Confidence 9999999 777654 99999999999 987542111 11 111111223468999999999999998776654
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-16 Score=127.72 Aligned_cols=120 Identities=18% Similarity=0.256 Sum_probs=93.4
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .++++++++|++++ ++++|.++. .|+++|+|+.
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 173 (252)
T 3f1l_A 94 DGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATE 173 (252)
T ss_dssp SEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHHHHH
Confidence 4566654432 2356777888999999999 67899999997754 889998865 7999999999
Q ss_pred HHHhhccCcchhhhCcc-cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+. |||+|+||.++|++......... .....+|||||++++||+|...
T Consensus 174 ~l~~~la----~e~~~~irvn~v~PG~v~t~~~~~~~~~~~------~~~~~~p~dva~~~~~L~s~~~ 232 (252)
T 3f1l_A 174 GMMQVLA----DEYQQRLRVNCINPGGTRTAMRASAFPTED------PQKLKTPADIMPLYLWLMGDDS 232 (252)
T ss_dssp HHHHHHH----HHTTTTCEEEEEECCSBSSHHHHHHCTTCC------GGGSBCTGGGHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhcCCcEEEEEecCcccCchhhhhCCccc------hhccCCHHHHHHHHHHHcCccc
Confidence 9999999 777664 99999999999998653221111 1125799999999999999754
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2.9e-16 Score=126.99 Aligned_cols=126 Identities=15% Similarity=0.157 Sum_probs=92.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC-c-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM-S-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~-~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|.+.+ ++++|.++ . .|+++|+|+.++
T Consensus 98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~ 177 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSF 177 (270)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHHHHHH
Confidence 44556444322 346677788999999999 67899999998866 88888773 2 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhcccc----------CCchhh-HhHHhh---CCCCChHhHHHHHHHHhcC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS----------LGDKFD-KSLYEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~----------~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
+++++ .++.+. +||+|+||.++|++.... ...... ...... ...++|||||++++||+|.
T Consensus 178 ~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~ 253 (270)
T 3is3_A 178 VRIFS----KDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSK 253 (270)
T ss_dssp HHHHH----HHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSG
T ss_pred HHHHH----HHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Confidence 99999 777654 999999999999986421 011111 111112 2356899999999999986
Q ss_pred CC
Q psy818 207 PP 208 (214)
Q Consensus 207 p~ 208 (214)
..
T Consensus 254 ~~ 255 (270)
T 3is3_A 254 EG 255 (270)
T ss_dssp GG
T ss_pred cc
Confidence 53
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.1e-16 Score=127.51 Aligned_cols=125 Identities=14% Similarity=0.161 Sum_probs=93.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .++++++++|++++ ++++|.++. .|+++|+|+.+
T Consensus 89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 168 (265)
T 3lf2_A 89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKN 168 (265)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHHHH
Confidence 45666544322 346677788999999999 67899999998764 889998865 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC-------c-hhhHhH------HhhCCCCChHhHHHHHHHHhc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG-------D-KFDKSL------YEAHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~-------~-~~~~~~------~~~~~~~~pedvA~~v~fl~s 205 (214)
++++++ .|+.+. |||+|+||.++|++...... . ...... ......++|||||++++||+|
T Consensus 169 l~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s 244 (265)
T 3lf2_A 169 LVRSMA----FEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLAS 244 (265)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHH----HHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhC
Confidence 999999 777764 99999999999998654221 1 111111 111235699999999999998
Q ss_pred CC
Q psy818 206 SP 207 (214)
Q Consensus 206 ~p 207 (214)
..
T Consensus 245 ~~ 246 (265)
T 3lf2_A 245 PL 246 (265)
T ss_dssp GG
T ss_pred ch
Confidence 54
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-16 Score=127.92 Aligned_cols=125 Identities=14% Similarity=0.228 Sum_probs=94.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 164 (248)
T 3op4_A 85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIG 164 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHH
Confidence 55666544221 245677778999999999 67899999997654 899998755 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .|+.+. +||+|+||.++|++..... .......... ...++|||||++++||+|...
T Consensus 165 l~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~ 231 (248)
T 3op4_A 165 FTKSMA----REVASRGVTVNTVAPGFIETDMTKALN-DEQRTATLAQVPAGRLGDPREIASAVAFLASPEA 231 (248)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBSSTTTTTSC-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHHHHhCeEEEEEeeCCCCCchhhhcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence 999999 777664 9999999999999875432 2222222222 235699999999999998653
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.59 E-value=9e-17 Score=129.30 Aligned_cols=126 Identities=17% Similarity=0.244 Sum_probs=88.1
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.+
T Consensus 88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~ 167 (259)
T 3edm_A 88 HGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMT 167 (259)
T ss_dssp EEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHHHHH
T ss_pred CEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHHHHH
Confidence 3466655533 2346677788999999999 67899999998755 889987643 79999999999
Q ss_pred HHhhccCcchhhhCcc-cccccCccchhhhhccccCCchhhHhH---HhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFDKSL---YEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~~~~---~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .|+.+. |||+|+||.++|++............. ......++|||||++++||+|...
T Consensus 168 l~~~la----~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~ 234 (259)
T 3edm_A 168 FTRGLA----KEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDA 234 (259)
T ss_dssp HHHHHH----HHHTTTCEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 999999 777765 999999999999987643322211111 122235699999999999998653
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.4e-16 Score=125.95 Aligned_cols=125 Identities=18% Similarity=0.184 Sum_probs=93.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .++++++++|+++ + ++++|.++. .|+++|+|+.
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 161 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVI 161 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHH
Confidence 44666544322 245677778999999999 6789999999763 2 789998754 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHH----hhCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLY----EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~----~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+. +||+|+||.++|++........ ..... .....++|||||++++||+|...
T Consensus 162 ~~~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~ 230 (247)
T 3rwb_A 162 GFTRALA----TELGKYNITANAVTPGLIESDGVKASPHNE-AFGFVEMLQAMKGKGQPEHIADVVSFLASDDA 230 (247)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCCHHHHTSGGGG-GHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhhhcCeEEEEEeeCcCcCccccccChhH-HHHHHhcccccCCCcCHHHHHHHHHHHhCccc
Confidence 9999999 777664 9999999999999875432211 11111 12235699999999999999754
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=5.6e-16 Score=123.74 Aligned_cols=129 Identities=19% Similarity=0.297 Sum_probs=95.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|+++ + +++||.++. .|+++|+|+.++
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 165 (247)
T 2jah_A 86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAF 165 (247)
T ss_dssp SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHHHHHHH
Confidence 45666544221 245667778899999999 6789999999754 4 889998765 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh--CCC--CChHhHHHHHHHHhcCCCcccc
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA--HPC--LQAEDIANTVEFILSSPPHVQV 212 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~--~~~--~~pedvA~~v~fl~s~p~~~~i 212 (214)
+++++ .++.+. +||+|+||.++|++........ ....... .+. ++|||||++++||++.++...+
T Consensus 166 ~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~~ 236 (247)
T 2jah_A 166 SETLR----QEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQRISQIRKLQAQDIAEAVRYAVTAPHHATV 236 (247)
T ss_dssp HHHHH----HHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHHHTTTSCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred HHHHH----HHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHhcccccCCCCHHHHHHHHHHHhCCCccCcc
Confidence 99999 777654 9999999999999865432211 1111111 233 8999999999999998876654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.8e-16 Score=128.12 Aligned_cols=126 Identities=18% Similarity=0.252 Sum_probs=93.5
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a 138 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|
T Consensus 107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa 186 (283)
T 3v8b_A 107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAA 186 (283)
T ss_dssp CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHH
Confidence 4466654432 2457777888999999999 67899999997754 889998753 79999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh---------HhHHhh--CCCCChHhHHHHHHHHhc
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD---------KSLYEA--HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~---------~~~~~~--~~~~~pedvA~~v~fl~s 205 (214)
+.+++++++ .++.+. +||+|+||.++|++.......... ...... ..+++|||||++++||+|
T Consensus 187 ~~~l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s 262 (283)
T 3v8b_A 187 QVAIVQQLA----LELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVS 262 (283)
T ss_dssp HHHHHHHHH----HHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTS
T ss_pred HHHHHHHHH----HHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcC
Confidence 999999999 777664 999999999999987543211110 000011 335699999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
..+
T Consensus 263 ~~a 265 (283)
T 3v8b_A 263 ERA 265 (283)
T ss_dssp GGG
T ss_pred ccc
Confidence 653
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=5.6e-16 Score=124.82 Aligned_cols=125 Identities=17% Similarity=0.234 Sum_probs=93.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.
T Consensus 90 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~ 169 (262)
T 3pk0_A 90 DVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQL 169 (262)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHHHH
Confidence 45666544322 346677788999999999 67899999997653 888998763 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+. +||+|+||.+.|++.... ............ ..++|||||++++||+|...
T Consensus 170 ~l~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~ 237 (262)
T 3pk0_A 170 GFMRTAA----IELAPHKITVNAIMPGNIMTEGLLEN-GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEA 237 (262)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECSBCCHHHHTT-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHHHhhCcEEEEEEeCcCcCcccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 9999999 777664 999999999999976542 222222222222 35699999999999998653
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.5e-16 Score=127.70 Aligned_cols=126 Identities=15% Similarity=0.174 Sum_probs=94.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~ 187 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVG 187 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHH
Confidence 44566444222 346677778999999999 67899999997654 889998865 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCch-hhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDK-FDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~-~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.+.|++........ ........ ...++|||||++++||+|...
T Consensus 188 l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a 256 (273)
T 3uf0_A 188 LTRALA----SEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAA 256 (273)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHH----HHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence 999999 777664 9999999999999865432221 12222222 235799999999999998653
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.58 E-value=6.4e-16 Score=125.21 Aligned_cols=126 Identities=13% Similarity=0.143 Sum_probs=92.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+.+ ++++|..+. .|+++|+|+.++
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l 190 (271)
T 3v2g_A 111 DILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGL 190 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHHHHH
Confidence 44566444322 346677778999999999 67899999998766 788886542 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCch-hhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDK-FDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++ .++.+. +||+|+||.++|++........ ...........++|||||++++||+|...
T Consensus 191 ~~~la----~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~ 255 (271)
T 3v2g_A 191 TKGLA----RDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQG 255 (271)
T ss_dssp HHHHH----HHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHH----HHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 99999 777664 9999999999999875422111 11111122235699999999999998643
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-16 Score=127.88 Aligned_cols=126 Identities=16% Similarity=0.205 Sum_probs=93.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 175 (266)
T 3uxy_A 96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALAS 175 (266)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHH
Confidence 45666544322 345677778999999999 67899999998753 889998865 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC-----ch-hhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG-----DK-FDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~-----~~-~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.++|++...... .. ........ ..+++|||||++++||+|.+.
T Consensus 176 l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 249 (266)
T 3uxy_A 176 LTQCMG----MDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAA 249 (266)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 999999 777654 99999999999998643211 01 11111122 235699999999999999754
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.5e-16 Score=126.30 Aligned_cols=126 Identities=15% Similarity=0.165 Sum_probs=93.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.
T Consensus 100 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 179 (266)
T 4egf_A 100 DVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLV 179 (266)
T ss_dssp SEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHHH
Confidence 44566443221 245667778899999999 6789999999763 2 789998865 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+. +||+|+||.+.|++.......... ....... ...+|||||++++||+|...
T Consensus 180 ~l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~ 249 (266)
T 4egf_A 180 MATKVLA----RELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAA 249 (266)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 9999999 777664 999999999999987644332222 2222222 25699999999999998653
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.57 E-value=5e-16 Score=124.70 Aligned_cols=123 Identities=16% Similarity=0.138 Sum_probs=91.8
Q ss_pred ceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHh
Q psy818 80 GRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRF 144 (214)
Q Consensus 80 ~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~ 144 (214)
+++|+.|.. ..++.+.+.++|+..+++| .++++++++|++.+ ++++|.++. .|+++|+|+.++++
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~ 164 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFAS 164 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHH
Confidence 345543322 2346677788999999999 67899999998766 899998866 79999999999999
Q ss_pred hccCcchhhhCcc--cccccCccchhhhhccccC-CchhhH----hH---HhhCCCCChHhHHHHHHHHhcC
Q psy818 145 NLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL-GDKFDK----SL---YEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 145 ~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~-~~~~~~----~~---~~~~~~~~pedvA~~v~fl~s~ 206 (214)
+++ .|+.+. +||+|+||.++|++..... ...... .. ......++|||||++++||+|.
T Consensus 165 ~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 232 (255)
T 4eso_A 165 VLA----AELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE 232 (255)
T ss_dssp HHH----HHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT
T ss_pred HHH----HHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence 999 777664 9999999999999765321 111111 11 1122356999999999999986
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-16 Score=128.33 Aligned_cols=125 Identities=13% Similarity=0.202 Sum_probs=92.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 108 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 187 (269)
T 4dmm_A 108 DVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIG 187 (269)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence 44566444221 235667778999999999 67899999997643 889998754 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.++|++...... ............++|||||++++||+|.|.
T Consensus 188 l~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~ 251 (269)
T 4dmm_A 188 LTKTVA----KELASRGITVNAVAPGFIATDMTSELAA-EKLLEVIPLGRYGEAAEVAGVVRFLAADPA 251 (269)
T ss_dssp HHHHHH----HHHGGGTCEEEEEEECCBTTSCSCHHHH-HHHGGGCTTSSCBCHHHHHHHHHHHHHCGG
T ss_pred HHHHHH----HHHhhhCcEEEEEEECCCcCcccccccH-HHHHhcCCCCCCCCHHHHHHHHHHHhCCcc
Confidence 999999 777654 99999999999997643211 111111122336799999999999999853
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.3e-16 Score=127.82 Aligned_cols=126 Identities=14% Similarity=0.210 Sum_probs=93.9
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 105 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~ 184 (271)
T 4ibo_A 105 DILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKM 184 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHH
Confidence 4456644422 1346677778999999999 67899999997754 899998865 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCc-hhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD-KFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~-~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+. +||+|+||.++|++....... ......... ...++|||||++++||+|...
T Consensus 185 l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~ 253 (271)
T 4ibo_A 185 LTRAMA----AEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASAS 253 (271)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHH----HHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999999 777664 999999999999987543211 111112122 235699999999999998654
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.2e-16 Score=124.43 Aligned_cols=125 Identities=12% Similarity=0.132 Sum_probs=91.5
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 159 (254)
T 3kzv_A 80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNH 159 (254)
T ss_dssp CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHHHHHH
T ss_pred cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHHHHHH
Confidence 44666544322 346677788999999999 67899999997743 889998865 89999999999
Q ss_pred HHhhccCcchhhhCcccccccCccchhhhhccccCC--------chhhHhH---HhhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLG--------DKFDKSL---YEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~--------~~~~~~~---~~~~~~~~pedvA~~v~fl~s~p 207 (214)
++++++ .|+.+.|||+|+||.++|++...... ....... ......++|||||++++||+|..
T Consensus 160 ~~~~la----~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~ 232 (254)
T 3kzv_A 160 FAMTLA----NEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHG 232 (254)
T ss_dssp HHHHHH----HHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHC
T ss_pred HHHHHH----hhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhc
Confidence 999999 66655699999999999998754321 1111111 12233679999999999999976
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=4.9e-16 Score=127.27 Aligned_cols=126 Identities=13% Similarity=0.132 Sum_probs=93.9
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.++
T Consensus 130 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l 209 (294)
T 3r3s_A 130 DILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNY 209 (294)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHHHHHHH
Confidence 44566544322 246677788999999999 67899999998766 899998866 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccC-CchhhHhHH---hhCCCCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL-GDKFDKSLY---EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~-~~~~~~~~~---~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++.++ .|+.+. +||+|+||.++|++..... ......... .....++|||||++++||+|...
T Consensus 210 ~~~la----~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 277 (294)
T 3r3s_A 210 SRGLA----KQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQES 277 (294)
T ss_dssp HHHHH----HHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHH----HHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999 777654 9999999999999843221 111111111 12235699999999999998654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-16 Score=128.43 Aligned_cols=126 Identities=16% Similarity=0.177 Sum_probs=94.5
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+..+++| .++++++++|++.+ ++++|.++. .|+++|+|+.++
T Consensus 127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 206 (291)
T 3ijr_A 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAF 206 (291)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHHHHH
Confidence 44566444322 245666778999999999 67899999998766 889998765 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++ .++.+. +||+|+||.+.|++............... ...+++|||||++++||+|...
T Consensus 207 ~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 273 (291)
T 3ijr_A 207 TRSLS----QSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDS 273 (291)
T ss_dssp HHHHH----HHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGG
T ss_pred HHHHH----HHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 99999 777654 99999999999998654333222222111 2235699999999999998754
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.6e-16 Score=129.06 Aligned_cols=113 Identities=15% Similarity=0.054 Sum_probs=87.8
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+..+++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.+++++++ .++.+
T Consensus 127 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la----~e~~~ 202 (296)
T 3k31_A 127 RYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLA----VDLGK 202 (296)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHHHHHHHHHHHHHHH----HHHHT
T ss_pred ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHHHHHHHHHHHHHHH----HHHhh
Confidence 45677778999999999 67899999998755 889998765 89999999999999999 77765
Q ss_pred c--cccccCccchhhhhccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
. +||+|+||.++|++......... ....... ...++|||||++++||+|..
T Consensus 203 ~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~ 259 (296)
T 3k31_A 203 QQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDL 259 (296)
T ss_dssp TTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred cCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence 4 99999999999987654221111 1111122 23569999999999999864
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5.1e-16 Score=127.16 Aligned_cols=113 Identities=15% Similarity=0.088 Sum_probs=85.0
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|+..+++| .+++++++.|++.+ ++++|.++. .|+++|+|+.+++++++ .++.+
T Consensus 128 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la----~e~~~ 203 (293)
T 3grk_A 128 RYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLA----VDLGP 203 (293)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHH----HHHGG
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHHHHHHHHHHHHH----HHHhH
Confidence 45667778999999999 67899999998765 889998865 89999999999999999 77766
Q ss_pred c--cccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
. +||+|+||.++|++.......... ...... ...++|||||++++||+|..
T Consensus 204 ~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 260 (293)
T 3grk_A 204 QNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDL 260 (293)
T ss_dssp GTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred hCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 4 999999999999986543322211 112122 23569999999999999864
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=3.3e-16 Score=127.04 Aligned_cols=126 Identities=17% Similarity=0.180 Sum_probs=92.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+.
T Consensus 103 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 182 (277)
T 3tsc_A 103 DIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVT 182 (277)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSSCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCCchhhHHHHHHHH
Confidence 44666544322 245677788999999999 6789999999763 2 899998865 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCC---------chhhHhHHhh---CCCCChHhHHHHHHHHhcC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG---------DKFDKSLYEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~---------~~~~~~~~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
+++++++ .|+.+. +||+|+||.++|++...... .......... ...++|||||++++||+|.
T Consensus 183 ~~~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~ 258 (277)
T 3tsc_A 183 GLARAFA----AELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASD 258 (277)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHH----HHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCc
Confidence 9999999 777664 99999999999998643100 0000000001 1256999999999999997
Q ss_pred CC
Q psy818 207 PP 208 (214)
Q Consensus 207 p~ 208 (214)
++
T Consensus 259 ~~ 260 (277)
T 3tsc_A 259 ES 260 (277)
T ss_dssp GG
T ss_pred cc
Confidence 64
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-15 Score=124.55 Aligned_cols=126 Identities=14% Similarity=0.129 Sum_probs=93.4
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~ 139 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.+++ ++++|.++. .|+++|+|+
T Consensus 87 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~ 166 (280)
T 3tox_A 87 DTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGL 166 (280)
T ss_dssp CEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHH
Confidence 4466654432 2346677778999999999 67899999998754 788887654 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccC---CchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---GDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
.+++++++ .++.+. +||+|+||.+.|++..... ........... ...++|||||++++||+|...
T Consensus 167 ~~l~~~la----~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a 239 (280)
T 3tox_A 167 IGLVQALA----VELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGA 239 (280)
T ss_dssp HHHHHHHH----HHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHH----HHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccc
Confidence 99999999 777654 9999999999999865422 11111111111 235699999999999998753
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.9e-16 Score=123.36 Aligned_cols=127 Identities=10% Similarity=0.069 Sum_probs=93.0
Q ss_pred CceecCCCcee----eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHH
Q psy818 79 NGRFKTNTRLC----LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic----~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a 138 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|
T Consensus 74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 153 (244)
T 1zmo_A 74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAA 153 (244)
T ss_dssp EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHH
T ss_pred CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHH
Confidence 33566544221 345667778899999999 67899999997754 889998765 79999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhc---cccCCchhhHhHHh----hCCCCChHhHHHHHHHHhcCCCc
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIF---KSSLGDKFDKSLYE----AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~---~~~~~~~~~~~~~~----~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+.+++++++ .++.+. +||+|+||.++|++. .....+........ ...+++|||||++++||+|....
T Consensus 154 ~~~~~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~ 229 (244)
T 1zmo_A 154 TVALVESAA----KTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAA 229 (244)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTG
T ss_pred HHHHHHHHH----HHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 999999999 777654 999999999999986 32111111111111 12356999999999999997543
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-16 Score=132.13 Aligned_cols=93 Identities=17% Similarity=0.053 Sum_probs=75.1
Q ss_pred CceecCCCce---eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL---CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i---c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .++++++|.|++++ ++++|.++. .|+++|+|+.
T Consensus 115 DilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~ 194 (329)
T 3lt0_A 115 NMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYGGGMSSAKAALE 194 (329)
T ss_dssp EEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHH
T ss_pred cEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCCCcchHHHHHHHHHHH
Confidence 3455644421 2356677888999999999 67899999998877 888988754 7999999999
Q ss_pred HHHhhccCcchhhhCc---ccccccCccchhhhhcccc
Q psy818 141 SLRFNLNDKNFCELFP---DLVQSISPGLVKSQIFKSS 175 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~---~~vn~v~pg~~~t~~~~~~ 175 (214)
+|+++++ .++.+ .+||+|+||.++|++....
T Consensus 195 ~~~~~la----~el~~~~gI~vn~v~PG~v~T~~~~~~ 228 (329)
T 3lt0_A 195 SDTRVLA----YHLGRNYNIRINTISAGPLKSRAATAI 228 (329)
T ss_dssp HHHHHHH----HHHHHHHCCEEEEEEECCCCCHHHHTC
T ss_pred HHHHHHH----HHhCCccCeEEEEEecceeechhHhhh
Confidence 9999999 77766 3999999999999987653
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5.6e-16 Score=123.63 Aligned_cols=125 Identities=18% Similarity=0.238 Sum_probs=94.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 163 (246)
T 3osu_A 84 DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIG 163 (246)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHH
Confidence 44666544322 245677778999999999 67899999997644 889998754 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+. +||+|+||.+.|++.... .+.......... ..++|||||++++||+|.+.
T Consensus 164 ~~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~ 230 (246)
T 3osu_A 164 LTKSAA----RELASRGITVNAVAPGFIVSDMTDAL-SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKA 230 (246)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBGGGCCSCS-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHH----HHhcccCeEEEEEEECCCcCCccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999999 777664 999999999999987543 222222222222 25699999999999998654
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.7e-16 Score=126.44 Aligned_cols=126 Identities=12% Similarity=0.149 Sum_probs=92.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 162 (269)
T 3vtz_A 83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLG 162 (269)
T ss_dssp CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHH
Confidence 45666544222 345566778899999999 67899999997643 889998865 89999999999
Q ss_pred HHhhccCcchhhhCcc-cccccCccchhhhhccccCC----------chhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLG----------DKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~----------~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
++++++ .++.++ +||+|+||.+.|++...... .......... ...++|||||++++||+|..
T Consensus 163 l~~~la----~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 238 (269)
T 3vtz_A 163 LTRSVA----IDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR 238 (269)
T ss_dssp HHHHHH----HHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence 999999 777665 99999999999998643210 1111111122 23569999999999999965
Q ss_pred C
Q psy818 208 P 208 (214)
Q Consensus 208 ~ 208 (214)
.
T Consensus 239 ~ 239 (269)
T 3vtz_A 239 S 239 (269)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.57 E-value=5.8e-16 Score=125.11 Aligned_cols=125 Identities=18% Similarity=0.216 Sum_probs=90.0
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 182 (266)
T 3grp_A 103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIG 182 (266)
T ss_dssp CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHH
Confidence 4456644422 1235666778899999999 66899999997654 889998865 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.+.|++.... .+......... ...++|||||++++||+|...
T Consensus 183 ~~~~la----~e~~~~gI~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~ 249 (266)
T 3grp_A 183 FSKALA----QEIASRNITVNCIAPGFIKSAMTDKL-NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEA 249 (266)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCSHHHHTC-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHhhhhCcEEEEEeeCcCCCchhhcc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999999 777654 999999999999987643 22222222222 235699999999999998653
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.8e-16 Score=124.31 Aligned_cols=124 Identities=15% Similarity=0.103 Sum_probs=85.3
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.......+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.++
T Consensus 101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 180 (260)
T 3gem_A 101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESL 180 (260)
T ss_dssp SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHH
T ss_pred CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHH
Confidence 45666544322222445567899999999 67899999998764 789998865 899999999999
Q ss_pred HhhccCcchhhhCcc-cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 143 RFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
+++++ .++.++ +||+|+||.+.|++....................+|||||++++||++.
T Consensus 181 ~~~la----~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~~ 241 (260)
T 3gem_A 181 TLSFA----ARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLDS 241 (260)
T ss_dssp HHHHH----HHHTTTCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHHC
T ss_pred HHHHH----HHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhC
Confidence 99999 777765 9999999999998653211001111111112356899999999999954
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.56 E-value=5e-16 Score=125.40 Aligned_cols=125 Identities=19% Similarity=0.228 Sum_probs=92.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 166 (267)
T 3t4x_A 87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLS 166 (267)
T ss_dssp SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHH
Confidence 55667544321 346677778999999999 66899999997765 889998865 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccC---------C-chhhHhHHh-------hCCCCChHhHHHHHHH
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---------G-DKFDKSLYE-------AHPCLQAEDIANTVEF 202 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---------~-~~~~~~~~~-------~~~~~~pedvA~~v~f 202 (214)
++++++ .++.+. |||+|+||.++|++..... . +........ ...+++|||||++++|
T Consensus 167 l~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~f 242 (267)
T 3t4x_A 167 LSRSLA----ELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTF 242 (267)
T ss_dssp HHHHHH----HHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHH
T ss_pred HHHHHH----HHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHH
Confidence 999999 777764 9999999999998654311 0 111111111 1235699999999999
Q ss_pred HhcCC
Q psy818 203 ILSSP 207 (214)
Q Consensus 203 l~s~p 207 (214)
|+|..
T Consensus 243 L~s~~ 247 (267)
T 3t4x_A 243 LSSPL 247 (267)
T ss_dssp HHSGG
T ss_pred HcCcc
Confidence 99954
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.1e-16 Score=125.46 Aligned_cols=127 Identities=17% Similarity=0.209 Sum_probs=85.0
Q ss_pred CceecCCCc--e-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhcc-----CC--CCCCCCcCc-------HHHHHH
Q psy818 79 NGRFKTNTR--L-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVE-----RS--PTLGSIEMS-------DYERRQ 136 (214)
Q Consensus 79 ~~~~h~ng~--i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~-----~~--v~i~S~a~~-------~Y~a~K 136 (214)
++++|+.|. . ..++.+.+.++|+.++++| .+++++++.|++ .+ ++++|.++. .|+++|
T Consensus 109 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 188 (280)
T 4da9_A 109 DCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSK 188 (280)
T ss_dssp CEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHHH
T ss_pred CEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHHH
Confidence 445664443 1 2346677788999999999 678999999975 22 789998865 799999
Q ss_pred HHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh--Hh-HHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 137 LAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD--KS-LYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~--~~-~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+|+.+++++++ .++.+. +||+|+||.++|++.......... .. .......++|||||++++||+|....
T Consensus 189 aa~~~l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~ 262 (280)
T 4da9_A 189 AGLAAFSQGLA----LRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFG 262 (280)
T ss_dssp HHHHHHHHHHH----HHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHTSTTG
T ss_pred HHHHHHHHHHH----HHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCcccc
Confidence 99999999999 777664 999999999999987543221111 11 11223356999999999999997653
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.5e-16 Score=126.52 Aligned_cols=126 Identities=21% Similarity=0.243 Sum_probs=94.6
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.
T Consensus 93 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 172 (281)
T 3svt_A 93 HGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVD 172 (281)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHHHHH
Confidence 44667555322 246677778999999999 67899999997754 889998754 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCch-hhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDK-FDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~-~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+. +||+|+||.+.|++........ ........ ...++|||||++++||+|...
T Consensus 173 ~l~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~ 242 (281)
T 3svt_A 173 HLMQLAA----DELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAA 242 (281)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 9999999 777654 9999999999999875432221 11222222 235699999999999998653
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.56 E-value=9.2e-16 Score=124.68 Aligned_cols=126 Identities=16% Similarity=0.190 Sum_probs=94.0
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 184 (277)
T 3gvc_A 105 DKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQ 184 (277)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHH
Confidence 4456644432 2346677888999999999 67899999997764 889998866 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC--c-hh---hHh---HHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG--D-KF---DKS---LYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~--~-~~---~~~---~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.++|++...... . .. ... ......+++|||||++++||+|...
T Consensus 185 l~~~la----~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a 258 (277)
T 3gvc_A 185 LSRITA----AELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDA 258 (277)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCcc
Confidence 999999 777664 99999999999997643211 0 00 011 1223456899999999999998653
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.2e-16 Score=125.76 Aligned_cols=126 Identities=20% Similarity=0.231 Sum_probs=93.2
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.+++
T Consensus 72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~ 151 (244)
T 4e4y_A 72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMT 151 (244)
T ss_dssp EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHH
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHH
Confidence 3456644422 2346677888999999999 67889999998766 888998865 7999999999999
Q ss_pred hhccCcchhhhCcc--cccccCccchhhhhccccCCch----------hhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 144 FNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDK----------FDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 144 ~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~----------~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++ .|+.+. +||+|+||.++|++........ ........ ...++|||||++++||+|.+.
T Consensus 152 ~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 227 (244)
T 4e4y_A 152 KSLA----LDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKS 227 (244)
T ss_dssp HHHH----HHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHH----HHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCcc
Confidence 9999 777664 9999999999999865321110 11111111 225699999999999998654
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.7e-16 Score=126.84 Aligned_cols=126 Identities=18% Similarity=0.203 Sum_probs=93.9
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 190 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHN 190 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHH
Confidence 4466654432 2346677788999999999 67899999997654 899998865 59999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccC--CchhhHhHH----hhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL--GDKFDKSLY----EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~--~~~~~~~~~----~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.++|++..... ......... .....++|||||++++||+|..+
T Consensus 191 l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a 261 (275)
T 4imr_A 191 LIQSQA----RDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEAC 261 (275)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHH----HHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCccc
Confidence 999999 777654 9999999999999865321 111111111 22335699999999999999653
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-15 Score=124.18 Aligned_cols=126 Identities=15% Similarity=0.162 Sum_probs=91.9
Q ss_pred CceecCCCcee-e-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-L-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|... . ++.+.+.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+
T Consensus 106 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 185 (286)
T 3uve_A 106 DIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGV 185 (286)
T ss_dssp CEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCCccHHHHHHHHH
Confidence 44566544222 1 25667778999999999 6789999999763 2 889998866 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccC-----------Cch-hhHh---HHhh--CCCCChHhHHHHH
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL-----------GDK-FDKS---LYEA--HPCLQAEDIANTV 200 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~-----------~~~-~~~~---~~~~--~~~~~pedvA~~v 200 (214)
.+++++++ .|+.+. +||+|+||.++|++..... ... .... .... ...++|||||+++
T Consensus 186 ~~~~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v 261 (286)
T 3uve_A 186 VGLMRAFG----VELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAV 261 (286)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHH
T ss_pred HHHHHHHH----HHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhccCCCcCCHHHHHHHH
Confidence 99999999 777764 9999999999999864210 000 0011 1011 2356999999999
Q ss_pred HHHhcCCC
Q psy818 201 EFILSSPP 208 (214)
Q Consensus 201 ~fl~s~p~ 208 (214)
+||+|..+
T Consensus 262 ~fL~s~~a 269 (286)
T 3uve_A 262 LFFASDEA 269 (286)
T ss_dssp HHHHSGGG
T ss_pred HHHcCccc
Confidence 99998653
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.7e-16 Score=126.54 Aligned_cols=125 Identities=18% Similarity=0.234 Sum_probs=93.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 186 (270)
T 3ftp_A 107 NVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAG 186 (270)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHH
Confidence 44666544222 235667778999999999 67899999997643 889998755 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.++|++..... .......... ...++|||||++++||+|...
T Consensus 187 l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 253 (270)
T 3ftp_A 187 MTRALA----REIGSRGITVNCVAPGFIDTDMTKGLP-QEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQA 253 (270)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCSHHHHHSC-HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHHhhhCeEEEEEEeCCCcCcchhhcC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCc
Confidence 999999 777654 9999999999999875432 2222222122 235699999999999998643
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.55 E-value=6.8e-16 Score=125.63 Aligned_cols=126 Identities=15% Similarity=0.242 Sum_probs=88.4
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 106 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 185 (281)
T 3v2h_A 106 DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMG 185 (281)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence 4456644422 2246667778999999999 67899999997754 889998865 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchh----------hHh-HH---hhCCCCChHhHHHHHHHHhc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF----------DKS-LY---EAHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~----------~~~-~~---~~~~~~~pedvA~~v~fl~s 205 (214)
++++++ .++.+. +||+|+||.+.|++......... ... .. .....++|||||++++||+|
T Consensus 186 l~~~la----~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s 261 (281)
T 3v2h_A 186 LTKTVA----LEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAG 261 (281)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHH----HHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcC
Confidence 999999 777664 99999999999998654321110 000 11 11235699999999999999
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
...
T Consensus 262 ~~a 264 (281)
T 3v2h_A 262 DDA 264 (281)
T ss_dssp SGG
T ss_pred CCc
Confidence 764
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-16 Score=127.38 Aligned_cols=123 Identities=13% Similarity=0.168 Sum_probs=85.0
Q ss_pred ceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHh
Q psy818 80 GRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRF 144 (214)
Q Consensus 80 ~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~ 144 (214)
+++|+.|.. ..++.+.+.++|+..+++| .+++++++.|...+ ++++|.++. .|+++|+|+.++++
T Consensus 94 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~ 173 (262)
T 3ksu_A 94 IAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTR 173 (262)
T ss_dssp EEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHHHHHHHH
Confidence 355543322 1345667778999999999 67899999996655 889998754 79999999999999
Q ss_pred hccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhH---HhhCCCCChHhHHHHHHHHhcC
Q psy818 145 NLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSL---YEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 145 ~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~---~~~~~~~~pedvA~~v~fl~s~ 206 (214)
+++ .++.+. +||+|+||.++|++............. .......+|||||++++||+|.
T Consensus 174 ~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~ 236 (262)
T 3ksu_A 174 AAS----KELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD 236 (262)
T ss_dssp HHH----HHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTT
T ss_pred HHH----HHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence 999 777654 999999999999987543222211111 1122356999999999999996
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-15 Score=120.20 Aligned_cols=124 Identities=18% Similarity=0.107 Sum_probs=94.4
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|++.+ ++++|.++. .|+++|+|+.++
T Consensus 61 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~ 140 (223)
T 3uce_A 61 DHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEAT 140 (223)
T ss_dssp EEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHHH
Confidence 4466755533 2346677788999999999 67889999998766 889998765 899999999999
Q ss_pred HhhccCcchhhhCcccccccCccchhhhhccccCCchh---hHhHHhh---CCCCChHhHHHHHHHHhcC
Q psy818 143 RFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKF---DKSLYEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~---~~~~~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
+++++ .++.+.|||+|+||.++|++......... ....... ....+|||||++++||++.
T Consensus 141 ~~~la----~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 206 (223)
T 3uce_A 141 TKVLA----KELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN 206 (223)
T ss_dssp HHHHH----HHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC
T ss_pred HHHHH----HhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC
Confidence 99999 78877899999999999998764332111 1111122 2356999999999999985
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.55 E-value=8.5e-16 Score=126.09 Aligned_cols=126 Identities=16% Similarity=0.217 Sum_probs=91.7
Q ss_pred CceecCCCcee-e-ecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-L-SMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~-~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|... . ++.+.+.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+
T Consensus 119 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~ 198 (299)
T 3t7c_A 119 DIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGL 198 (299)
T ss_dssp CEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCcchHHHHHHHH
Confidence 44566444222 1 26677888999999999 6789999998653 2 889998865 899999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccC---------CchhhHh------HHhh--CCCCChHhHHHHH
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---------GDKFDKS------LYEA--HPCLQAEDIANTV 200 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---------~~~~~~~------~~~~--~~~~~pedvA~~v 200 (214)
.+++++++ .|+.+. +||+|+||.++|++..... ....... .... .+.++|||||+++
T Consensus 199 ~~l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v 274 (299)
T 3t7c_A 199 HGLMRTMA----LELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPADISNAI 274 (299)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSSCSCBCHHHHHHHH
T ss_pred HHHHHHHH----HHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccCcCCCCHHHHHHHH
Confidence 99999999 777764 9999999999999864210 0000000 1111 2356999999999
Q ss_pred HHHhcCCC
Q psy818 201 EFILSSPP 208 (214)
Q Consensus 201 ~fl~s~p~ 208 (214)
+||+|...
T Consensus 275 ~fL~s~~a 282 (299)
T 3t7c_A 275 LFLVSDDA 282 (299)
T ss_dssp HHHHSGGG
T ss_pred HHHhCccc
Confidence 99998653
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-15 Score=123.44 Aligned_cols=126 Identities=17% Similarity=0.175 Sum_probs=93.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 182 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISS 182 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHH
Confidence 44666544222 346677778999999999 67899999998764 889998865 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccC---Cch-hh-HhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---GDK-FD-KSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---~~~-~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.++|++..... ... .. ...... ...++|||||++++||+|...
T Consensus 183 l~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~ 255 (277)
T 4dqx_A 183 LTRAMA----MDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRS 255 (277)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCcc
Confidence 999999 777664 9999999999999843211 111 11 111111 235699999999999998654
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=4.2e-16 Score=125.64 Aligned_cols=126 Identities=15% Similarity=0.184 Sum_probs=93.0
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.+
T Consensus 90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 169 (264)
T 3ucx_A 90 DVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLA 169 (264)
T ss_dssp SEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHHHHHHHHH
Confidence 4466654432 2346677778999999999 6788999999764 3 889998865 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC---------chh-hHhHHhh---CCCCChHhHHHHHHHHhcC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG---------DKF-DKSLYEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~---------~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
++++++ .++.+. +||+|+||.+.|++...... .+. ....... ..+++|||||++++||+|.
T Consensus 170 ~~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~ 245 (264)
T 3ucx_A 170 MSQTLA----TELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASD 245 (264)
T ss_dssp HHHHHH----HHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSG
T ss_pred HHHHHH----HHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCc
Confidence 999999 777654 99999999999987653211 011 1111112 2256999999999999986
Q ss_pred CC
Q psy818 207 PP 208 (214)
Q Consensus 207 p~ 208 (214)
..
T Consensus 246 ~~ 247 (264)
T 3ucx_A 246 LA 247 (264)
T ss_dssp GG
T ss_pred cc
Confidence 53
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-15 Score=119.20 Aligned_cols=124 Identities=19% Similarity=0.183 Sum_probs=93.5
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|.+.+ ++++|..+. .|+++|+|+.++
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~ 161 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARAL 161 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHHH
Confidence 4466654422 2346677778999999999 67899999995543 666776644 799999999999
Q ss_pred HhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcccc
Q psy818 143 RFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i 212 (214)
++.++ .+..+.+||+|+||.++|++......... ....++|||||++++||++.+++..+
T Consensus 162 ~~~l~----~~~~~i~v~~v~PG~v~T~~~~~~~~~~~------~~~~~~p~dva~~v~~l~~~~~~~~~ 221 (235)
T 3l77_A 162 VRTFQ----IENPDVRFFELRPGAVDTYFGGSKPGKPK------EKGYLKPDEIAEAVRCLLKLPKDVRV 221 (235)
T ss_dssp HHHHH----HHCTTSEEEEEEECSBSSSTTTCCSCCCG------GGTCBCHHHHHHHHHHHHTSCTTCCC
T ss_pred HHHHh----hcCCCeEEEEEeCCccccccccccCCccc------ccCCCCHHHHHHHHHHHHcCCCCCcc
Confidence 99996 55445699999999999998764332211 11458999999999999999987654
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.1e-16 Score=121.38 Aligned_cols=125 Identities=15% Similarity=0.141 Sum_probs=88.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.++
T Consensus 74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 153 (230)
T 3guy_A 74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGL 153 (230)
T ss_dssp SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence 4456654422 2345567778999999999 67899999998765 788888765 899999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
++.++ .++.+. +||+|+||.++|++....... .....+++|||+|++++||++.+....|+
T Consensus 154 ~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~dvA~~i~~l~~~~~~~~it 216 (230)
T 3guy_A 154 IESVR----LELKGKPMKIIAVYPGGMATEFWETSGKS------LDTSSFMSAEDAALMIHGALANIGNGYVS 216 (230)
T ss_dssp HHHHH----HHTTTSSCEEEEEEECCC----------------------CCCHHHHHHHHHHHCCEETTEEEE
T ss_pred HHHHH----HHHHhcCeEEEEEECCcccChHHHhcCCC------CCcccCCCHHHHHHHHHHHHhCcCCCCcc
Confidence 99999 777654 999999999999987542211 12234679999999999999987665543
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-15 Score=123.42 Aligned_cols=121 Identities=13% Similarity=0.130 Sum_probs=92.5
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.
T Consensus 95 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaal~ 174 (285)
T 3sc4_A 95 DICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMT 174 (285)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHHHHHHHHH
Confidence 44666544322 246677788999999999 67899999998754 889997754 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCcc-chhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPG-LVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg-~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+. +||+|+|| .++|++........ ......++|||||++++||+|.++
T Consensus 175 ~~~~~la----~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~-----~~~~r~~~pedvA~~~~~l~s~~~ 236 (285)
T 3sc4_A 175 LCALGIA----EELRDAGIASNTLWPRTTVATAAVQNLLGGD-----EAMARSRKPEVYADAAYVVLNKPS 236 (285)
T ss_dssp HHHHHHH----HHTGGGTCEEEEEECSSCBCCHHHHHHHTSC-----CCCTTCBCTHHHHHHHHHHHTSCT
T ss_pred HHHHHHH----HHhcccCcEEEEEeCCCccccHHHHhhcccc-----ccccCCCCHHHHHHHHHHHhCCcc
Confidence 9999999 777664 99999999 78998765321111 011235799999999999999876
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-15 Score=123.96 Aligned_cols=129 Identities=24% Similarity=0.362 Sum_probs=87.9
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C-CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S-PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~-v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|+++ . ++++|.++. .|+++|+|+
T Consensus 99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~ 178 (272)
T 2nwq_A 99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFV 178 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHH
Confidence 44566444321 345667778999999999 6689999999753 2 688998765 799999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCC-ch-hhHhHHhhCCCCChHhHHHHHHHHhcCCCccc
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG-DK-FDKSLYEAHPCLQAEDIANTVEFILSSPPHVQ 211 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~-~~-~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~ 211 (214)
.++++.++ .++.+ .+||+|+||.++|++...... +. ..........+++|||||++++||++.++.+.
T Consensus 179 ~~l~~~la----~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~ 250 (272)
T 2nwq_A 179 EQFSLNLR----CDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLN 250 (272)
T ss_dssp HHHHHHHH----TTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHHHHTSCTTEE
T ss_pred HHHHHHHH----HHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCCccCc
Confidence 99999999 66655 399999999999998643211 11 11111122346899999999999999877654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.54 E-value=9.9e-16 Score=124.39 Aligned_cols=124 Identities=15% Similarity=0.192 Sum_probs=92.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc---------HHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS---------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~---------~Y~a~K~a 138 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa 190 (276)
T 3r1i_A 111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAA 190 (276)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHH
Confidence 44566444322 245677778999999999 6789999999764 2 788887653 69999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.+++++++ .++.+. |||+|+||.++|++..... ......... ...++|||||++++||+|..+
T Consensus 191 ~~~l~~~la----~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~ 259 (276)
T 3r1i_A 191 VVHLTKAMA----VELAPHQIRVNSVSPGYIRTELVEPLA--DYHALWEPKIPLGRMGRPEELTGLYLYLASAAS 259 (276)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEECCBCSTTTGGGG--GGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGG
T ss_pred HHHHHHHHH----HHHhhcCcEEEEEeeCCCcCCccccch--HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 999999999 777664 9999999999999875421 111111122 235699999999999999653
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.54 E-value=9.4e-16 Score=124.66 Aligned_cols=126 Identities=13% Similarity=0.195 Sum_probs=91.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHH--hhccCC----CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLS--FMVERS----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~--~m~~~~----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++ .|.+++ ++++|.++. .|+++|+|+
T Consensus 103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~ 182 (279)
T 3sju_A 103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGV 182 (279)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHH
Confidence 44566544222 245667778999999999 67888888 566543 899998865 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccC---------Cchh-hHhHHhh---CCCCChHhHHHHHHHHh
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---------GDKF-DKSLYEA---HPCLQAEDIANTVEFIL 204 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---------~~~~-~~~~~~~---~~~~~pedvA~~v~fl~ 204 (214)
.+++++++ .++.+. +||+|+||.++|++..... .... ....... ..+++|||||++++||+
T Consensus 183 ~~l~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~ 258 (279)
T 3sju_A 183 VGFTKSVG----FELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLV 258 (279)
T ss_dssp HHHHHHHH----HHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHH----HHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence 99999999 777664 9999999999999865321 1111 1112122 23569999999999999
Q ss_pred cCCC
Q psy818 205 SSPP 208 (214)
Q Consensus 205 s~p~ 208 (214)
|...
T Consensus 259 s~~a 262 (279)
T 3sju_A 259 TDAA 262 (279)
T ss_dssp SSGG
T ss_pred Cccc
Confidence 9754
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-15 Score=122.69 Aligned_cols=126 Identities=15% Similarity=0.181 Sum_probs=93.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.
T Consensus 84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 163 (259)
T 4e6p_A 84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVI 163 (259)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence 45667544322 246677778999999999 6789999999763 2 889998865 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhcccc----------CCchhhHhHHh---hCCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS----------LGDKFDKSLYE---AHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~----------~~~~~~~~~~~---~~~~~~pedvA~~v~fl~s 205 (214)
++++.++ .++.+. +||+|+||.+.|++.... ........... ...+++|||||++++||+|
T Consensus 164 ~~~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s 239 (259)
T 4e6p_A 164 SLTQSAG----LDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLAS 239 (259)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTS
T ss_pred HHHHHHH----HHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999 777654 999999999999876432 11111111112 2236799999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
...
T Consensus 240 ~~~ 242 (259)
T 4e6p_A 240 AES 242 (259)
T ss_dssp GGG
T ss_pred Ccc
Confidence 653
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-15 Score=122.94 Aligned_cols=126 Identities=13% Similarity=0.236 Sum_probs=92.4
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 101 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 180 (281)
T 3s55_A 101 DIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIG 180 (281)
T ss_dssp CEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCCCchhHHHHHHHHH
Confidence 4466654422 1246677788999999999 67899999997654 899998866 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhcccc-----CC----chhh---Hh---HHhh--CCCCChHhHHHHHHH
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS-----LG----DKFD---KS---LYEA--HPCLQAEDIANTVEF 202 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~-----~~----~~~~---~~---~~~~--~~~~~pedvA~~v~f 202 (214)
++++++ .|+.+. +||+|+||.+.|++.... .. .... .. .... ..+++|||||++++|
T Consensus 181 ~~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~ 256 (281)
T 3s55_A 181 LTKCAA----HDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLF 256 (281)
T ss_dssp HHHHHH----HHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHH
T ss_pred HHHHHH----HHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHH
Confidence 999999 777654 999999999999986431 00 0000 00 0011 235799999999999
Q ss_pred HhcCCC
Q psy818 203 ILSSPP 208 (214)
Q Consensus 203 l~s~p~ 208 (214)
|+|.++
T Consensus 257 L~s~~~ 262 (281)
T 3s55_A 257 LVDEAS 262 (281)
T ss_dssp HHSGGG
T ss_pred HcCCcc
Confidence 999754
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.2e-15 Score=121.13 Aligned_cols=120 Identities=13% Similarity=0.197 Sum_probs=88.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+.++++| .++++++++|++++ ++++|.++. .|+++|+|+
T Consensus 92 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaal 171 (274)
T 3e03_A 92 DILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGM 171 (274)
T ss_dssp CEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHHHHHHHHH
T ss_pred CEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchHHHHHHHH
Confidence 44666544322 245667778999999999 67899999998754 889998765 599999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCcc-chhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPG-LVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg-~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.+++++++ .++.+. +||+|+|| .++|++........ .....+|||||++++||+|....
T Consensus 172 ~~l~~~la----~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~~-------~~~~~~pedvA~~v~~l~s~~~~ 233 (274)
T 3e03_A 172 SLVTLGLA----AEFGPQGVAINALWPRTVIATDAINMLPGVD-------AAACRRPEIMADAAHAVLTREAA 233 (274)
T ss_dssp HHHHHHHH----HHHGGGTCEEEEEECSBCBCC-------CCC-------GGGSBCTHHHHHHHHHHHTSCCT
T ss_pred HHHHHHHH----HHhhhcCEEEEEEECCcccccchhhhccccc-------ccccCCHHHHHHHHHHHhCcccc
Confidence 99999999 777664 99999999 68998763211111 11247999999999999997653
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.53 E-value=2e-15 Score=123.71 Aligned_cols=125 Identities=14% Similarity=0.140 Sum_probs=93.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.
T Consensus 121 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~ 200 (293)
T 3rih_A 121 DVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQL 200 (293)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHHHHH
Confidence 4456644422 2346677788999999999 67889999997653 889998763 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+. +||+|+||.+.|++..... ........... ..++|||||++++||+|...
T Consensus 201 ~l~~~la----~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a 268 (293)
T 3rih_A 201 GFMRTAA----IELAPRGVTVNAILPGNILTEGLVDMG-EEYISGMARSIPMGMLGSPVDIGHLAAFLATDEA 268 (293)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECSBCCHHHHHTC-HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHHhhhCeEEEEEecCCCcCcchhhcc-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 9999999 777664 9999999999999765432 22222222222 25699999999999998653
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.1e-15 Score=124.12 Aligned_cols=126 Identities=17% Similarity=0.220 Sum_probs=91.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|+++ + ++++|.++. .|+++|+|+.
T Consensus 107 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 186 (280)
T 3pgx_A 107 DVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLT 186 (280)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCCchhHHHHHHHHH
Confidence 44666544322 346677788999999999 6789999999764 2 889998866 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccC-------CchhhHh--HHhh--CCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL-------GDKFDKS--LYEA--HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~-------~~~~~~~--~~~~--~~~~~pedvA~~v~fl~s~p 207 (214)
+++++++ .++.+. +||+|+||.++|++..... ....... .... ...++|||||++++||+|..
T Consensus 187 ~~~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~ 262 (280)
T 3pgx_A 187 ALTNTLA----IELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDG 262 (280)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHH----HHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCcc
Confidence 9999999 777664 9999999999999764310 0000000 0000 12569999999999999865
Q ss_pred C
Q psy818 208 P 208 (214)
Q Consensus 208 ~ 208 (214)
.
T Consensus 263 ~ 263 (280)
T 3pgx_A 263 S 263 (280)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=5.2e-15 Score=120.35 Aligned_cols=107 Identities=16% Similarity=0.123 Sum_probs=80.0
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc-cccc
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD-LVQS 161 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~-~vn~ 161 (214)
++|+.++++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+++++++ .++.+. |||+
T Consensus 106 ~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la----~e~~~~Irvn~ 181 (281)
T 3zv4_A 106 AAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMA----FELAPHVRVNG 181 (281)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHHHHHHHHHHHHHH----HHHTTTSEEEE
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHHHHHHHHHHHHHH----HHhcCCCEEEE
Confidence 4599999999 67899999997643 888998865 79999999999999999 777775 9999
Q ss_pred cCccchhhhhccccCC---------chhhHhHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 162 ISPGLVKSQIFKSSLG---------DKFDKSLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 162 v~pg~~~t~~~~~~~~---------~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
|+||.++|++...... ......... ....++|||||++++||+|.+.
T Consensus 182 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~ 240 (281)
T 3zv4_A 182 VAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGD 240 (281)
T ss_dssp EEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTT
T ss_pred EECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccc
Confidence 9999999998643210 011111111 2235699999999999999543
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.4e-15 Score=121.04 Aligned_cols=124 Identities=15% Similarity=0.224 Sum_probs=87.2
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.
T Consensus 108 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 187 (262)
T 3rkr_A 108 DVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLN 187 (262)
T ss_dssp SEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHHH
Confidence 45666544312 245666778899999999 67899999997654 789998866 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcccc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i 212 (214)
+++++++ .++.+. +||+|+||.++|++....... ......++|||||++++||+|.+....+
T Consensus 188 ~l~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~p~dvA~~v~~l~s~~~~~~~ 251 (262)
T 3rkr_A 188 GLMTSAA----EELRQHQVRVSLVAPGSVRTEFGVGLSAK------KSALGAIEPDDIADVVALLATQADQSFI 251 (262)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECCC----------------------CCCHHHHHHHHHHHHTCCTTCCE
T ss_pred HHHHHHH----HHhhhcCcEEEEEecCCCcCCcccccccc------cccccCCCHHHHHHHHHHHhcCcccccc
Confidence 9999999 666553 999999999999986532211 1122357999999999999998866543
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.1e-15 Score=124.09 Aligned_cols=125 Identities=13% Similarity=0.099 Sum_probs=91.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 107 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 186 (277)
T 4fc7_A 107 DILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDA 186 (277)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHHHH
T ss_pred CEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence 44566544222 245667778999999999 67889999886542 889998755 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccC-Cc-hhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL-GD-KFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~-~~-~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
++++++ .++.+. +||+|+||.+.|++..... .. ......... ...++|||||++++||+|..
T Consensus 187 l~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~ 255 (277)
T 4fc7_A 187 MTRHLA----VEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPL 255 (277)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCc
Confidence 999999 777764 9999999999987542221 11 111222222 23569999999999999854
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-15 Score=121.10 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=90.4
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhcc-C--C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVE-R--S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~-~--~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.+ . + ++++|.++. .|+++|+|+.
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 164 (257)
T 3imf_A 85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL 164 (257)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHH
Confidence 4566654422 1346677778999999999 678999999843 2 2 789998865 7999999999
Q ss_pred HHHhhccCcchhhhC-c--ccccccCccchhhhhccccC--CchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELF-P--DLVQSISPGLVKSQIFKSSL--GDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~-~--~~vn~v~pg~~~t~~~~~~~--~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .|+. + .|||+|+||.++|++..... .+......... ...++|||||++++||+|.+.
T Consensus 165 ~l~~~la----~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 236 (257)
T 3imf_A 165 AMTKTLA----VEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEA 236 (257)
T ss_dssp HHHHHHH----HHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 9999999 7775 3 49999999999998653221 11111222222 235699999999999998654
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-15 Score=120.46 Aligned_cols=123 Identities=15% Similarity=0.108 Sum_probs=91.4
Q ss_pred ceecCCCcee---eecCC-CCCCCCcCcccHH-----HHHHHHHHhhccC--C----CCCCCCcCc-------HHHHHHH
Q psy818 80 GRFKTNTRLC---LSMSD-FHPDTWNPAWSVS-----TILTGLLSFMVER--S----PTLGSIEMS-------DYERRQL 137 (214)
Q Consensus 80 ~~~h~ng~ic---~~~l~-~~~e~w~~~~~vn-----~~l~a~~~~m~~~--~----v~i~S~a~~-------~Y~a~K~ 137 (214)
+++|+.|... .++.+ .+.++|+.++++| .+++++++.|+++ + +++||.++. .|+++|+
T Consensus 95 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 174 (259)
T 1oaa_A 95 LLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKA 174 (259)
T ss_dssp EEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred EEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCCccHHHHHHH
Confidence 3566544221 23555 5668899999999 6789999999876 3 899998865 7999999
Q ss_pred HHHHHHhhccCcchhhhCcccccccCccchhhhhccccC----CchhhH---hHHhhCCCCChHhHHHHHHHHhcC
Q psy818 138 AARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSL----GDKFDK---SLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 138 a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~----~~~~~~---~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
|+.+++++++ .++.+.+||+|+||.++|++..... ...... .......+++|||||++++||++.
T Consensus 175 a~~~~~~~la----~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 175 ARDMLYQVLA----AEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHHHHHHH----HHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----hhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhh
Confidence 9999999999 7776689999999999999865321 111111 111223467999999999999985
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.5e-15 Score=120.83 Aligned_cols=126 Identities=14% Similarity=0.191 Sum_probs=87.4
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 101 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 180 (273)
T 1ae1_A 101 NILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQ 180 (273)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHHH
Confidence 4456654432 2345666778899999999 67899999997643 889998865 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC----c-hhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG----D-KFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~----~-~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+. +||+|+||.+.|++...... . ......... ..+++|||||++++||+|.+.
T Consensus 181 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 253 (273)
T 1ae1_A 181 MTKSLA----CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA 253 (273)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999999 777653 99999999999998653221 1 111112122 235699999999999998643
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.51 E-value=3e-15 Score=119.55 Aligned_cols=125 Identities=22% Similarity=0.225 Sum_probs=92.6
Q ss_pred ceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHh
Q psy818 80 GRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRF 144 (214)
Q Consensus 80 ~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~ 144 (214)
+++|+.|... ..+.+.+.++|+.++++| .+++++++.|...+ ++++|.++. .|+++|+|+.++++
T Consensus 94 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~ 173 (255)
T 3icc_A 94 ILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTF 173 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHhHHHHHHHHH
Confidence 3556444221 235566678899999999 67888999986655 889998865 79999999999999
Q ss_pred hccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh----CCCCChHhHHHHHHHHhcCCC
Q psy818 145 NLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA----HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 145 ~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~pedvA~~v~fl~s~p~ 208 (214)
.++ .++.+. +||+|+||.++|++................ ....+|||||++++||+|...
T Consensus 174 ~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 239 (255)
T 3icc_A 174 TLA----KQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDS 239 (255)
T ss_dssp HHH----HHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHH----HHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCccc
Confidence 999 676553 999999999999987655443322222221 235699999999999998653
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.9e-15 Score=119.83 Aligned_cols=114 Identities=18% Similarity=0.153 Sum_probs=88.1
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
++.+.+.++|...+++| .+++++++.|++.+ ++++|.++. .|+++|+|+.+++++++ .++.+
T Consensus 106 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la----~e~~~ 181 (266)
T 3oig_A 106 EYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLA----ADLGK 181 (266)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHH----HHHGG
T ss_pred chhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHHHHHHHHHHHHHHH----HHHhh
Confidence 45566778899999999 57889999998665 889998865 89999999999999999 77765
Q ss_pred c--cccccCccchhhhhccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
. +||+|+||.++|++......... ....... ...++|||||++++||++.+.
T Consensus 182 ~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~ 239 (266)
T 3oig_A 182 ENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMS 239 (266)
T ss_dssp GTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred cCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCch
Confidence 4 99999999999998765432221 1222222 235699999999999998653
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.6e-15 Score=119.43 Aligned_cols=119 Identities=16% Similarity=0.200 Sum_probs=91.2
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .++++++++|++++ ++++|.++. .|+++|+|+.
T Consensus 96 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 175 (247)
T 3i1j_A 96 DGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATE 175 (247)
T ss_dssp SEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence 4566655432 2346667778999999999 67899999997764 788888765 8999999999
Q ss_pred HHHhhccCcchhhhCc---ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP---DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~---~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
++++.++ .++.+ .+||+|+||.++|++......... .....+|||||++++||+|..
T Consensus 176 ~~~~~la----~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~------~~~~~~p~dva~~~~~l~s~~ 235 (247)
T 3i1j_A 176 GLMQTLA----DELEGVTAVRANSINPGATRTGMRAQAYPDEN------PLNNPAPEDIMPVYLYLMGPD 235 (247)
T ss_dssp HHHHHHH----HHHTTTSSEEEEEEECCCCSSHHHHHHSTTSC------GGGSCCGGGGTHHHHHHHSGG
T ss_pred HHHHHHH----HHhcCCCCeEEEEEecCcccCccchhcccccC------ccCCCCHHHHHHHHHHHhCch
Confidence 9999999 67643 399999999999998653221111 112468999999999999864
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.8e-15 Score=133.98 Aligned_cols=116 Identities=16% Similarity=0.144 Sum_probs=90.6
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++| |+++. .++.+++.++|+.++++| .++++++|+|++++ ||++|.++. .|+++|+|+.
T Consensus 93 DiLVn-NAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~ 171 (604)
T 2et6_A 93 HVIIN-NAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALL 171 (604)
T ss_dssp CEEEE-CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHH
T ss_pred CEEEE-CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHHHHHHHH
Confidence 44555 44443 347788889999999999 77999999997653 899998865 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+|+++++ .|+.+. |||+|+|| +.|++........ . ...++|||||.+++||+|..
T Consensus 172 ~lt~~la----~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~----~---~~~~~pe~vA~~v~~L~s~~ 228 (604)
T 2et6_A 172 GFAETLA----KEGAKYNIKANAIAPL-ARSRMTESIMPPP----M---LEKLGPEKVAPLVLYLSSAE 228 (604)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEEC-CCCHHHHTTSCHH----H---HTTCSHHHHHHHHHHHTSSS
T ss_pred HHHHHHH----HHhCccCeEEEEEccC-CcCccccccCChh----h---hccCCHHHHHHHHHHHhCCc
Confidence 9999999 777664 99999998 5888764322111 1 12379999999999999975
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.50 E-value=5.5e-15 Score=117.77 Aligned_cols=125 Identities=16% Similarity=0.228 Sum_probs=91.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 163 (246)
T 2uvd_A 84 DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIG 163 (246)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHH
Confidence 45666544322 235566778899999999 56899999997643 889998754 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+. +||+|+||.++|++..... .......... ..+++|||||++++||+|.+.
T Consensus 164 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 230 (246)
T 2uvd_A 164 LTKTSA----KELASRNITVNAIAPGFIATDMTDVLD-ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQS 230 (246)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBGGGCSSCCC-TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHhhhcCeEEEEEEeccccCcchhhcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 999999 676653 9999999999999865421 2111111111 235699999999999998653
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.50 E-value=5.3e-15 Score=119.06 Aligned_cols=126 Identities=12% Similarity=0.144 Sum_probs=86.3
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|++. + ++++|.++. .|+++|+|+.
T Consensus 103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~ 182 (266)
T 3o38_A 103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVM 182 (266)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHHHHH
Confidence 4456644422 1235566778899999999 6789999999865 2 788998765 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+. +||+|+||.++|++............... ....++|||||++++||+|...
T Consensus 183 ~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~ 251 (266)
T 3o38_A 183 ALTRCSA----IEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYS 251 (266)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence 9999999 676653 99999999999998754332222221111 1235699999999999998643
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.50 E-value=3.3e-15 Score=133.51 Aligned_cols=118 Identities=13% Similarity=0.191 Sum_probs=89.2
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++| |+++. .++.+++.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.
T Consensus 397 DiLVn-NAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~ 475 (604)
T 2et6_A 397 DILVN-NAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGIL 475 (604)
T ss_dssp CEEEE-CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred CEEEE-CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHH
Confidence 33444 44443 347788889999999999 67999999997654 899998754 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+|+++++ .|+.+. |||+|+||. +|++......+. ....++|||||++++||+|....
T Consensus 476 ~lt~~la----~El~~~gIrVn~v~PG~-~T~m~~~~~~~~-------~~~~~~pe~vA~~v~~L~s~~~~ 534 (604)
T 2et6_A 476 GLSKTMA----IEGAKNNIKVNIVAPHA-ETAMTLSIMREQ-------DKNLYHADQVAPLLVYLGTDDVP 534 (604)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECC-CCCC----------------CCSSCGGGTHHHHHHTTSTTCC
T ss_pred HHHHHHH----HHhCccCeEEEEEcCCC-CCccccccCchh-------hccCCCHHHHHHHHHHHhCCccC
Confidence 9999999 777664 999999995 888764321110 12247999999999999997554
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.50 E-value=3.9e-15 Score=120.24 Aligned_cols=126 Identities=15% Similarity=0.275 Sum_probs=91.0
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 184 (269)
T 3gk3_A 105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHG 184 (269)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHHH
Confidence 4456644422 1345666778899999999 67889999997653 889998754 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHH---hhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLY---EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~---~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.++|++.............. ......+|||||++++||+|...
T Consensus 185 ~~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~ 252 (269)
T 3gk3_A 185 FTKTLA----LETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDA 252 (269)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTC
T ss_pred HHHHHH----HHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCc
Confidence 999999 676653 9999999999999876432211111111 12235699999999999999764
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.50 E-value=9.3e-15 Score=120.90 Aligned_cols=125 Identities=18% Similarity=0.285 Sum_probs=91.5
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.| +. .++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+
T Consensus 137 D~lVnnAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~ 215 (317)
T 3oec_A 137 DILVSNVG-ISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGV 215 (317)
T ss_dssp CEEEECCC-CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTBHHHHHHHHHH
T ss_pred CEEEECCC-CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCCcchHHHHHHH
Confidence 44556443 33 246677788999999999 67899999997652 789998865 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhcccc---------CCch---hhHhHHhh-----CCCCChHhHHHHH
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS---------LGDK---FDKSLYEA-----HPCLQAEDIANTV 200 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~---------~~~~---~~~~~~~~-----~~~~~pedvA~~v 200 (214)
.+++++++ .++.+. +||+|+||.++|++.... .... ........ .+.++|||||+++
T Consensus 216 ~~l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av 291 (317)
T 3oec_A 216 QGLMLSLA----NEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAV 291 (317)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHH
T ss_pred HHHHHHHH----HHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHH
Confidence 99999999 777664 999999999999875321 0000 00111111 2346999999999
Q ss_pred HHHhcCCC
Q psy818 201 EFILSSPP 208 (214)
Q Consensus 201 ~fl~s~p~ 208 (214)
+||+|...
T Consensus 292 ~fL~s~~a 299 (317)
T 3oec_A 292 AWLASDEA 299 (317)
T ss_dssp HHHTSGGG
T ss_pred HHHcCCcc
Confidence 99998653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-15 Score=121.26 Aligned_cols=126 Identities=17% Similarity=0.239 Sum_probs=92.1
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 165 (262)
T 1zem_A 86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAII 165 (262)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHH
Confidence 5566654432 2345667778899999999 67899999997643 889998644 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhcccc------------CC-chh-h-HhHHhh---CCCCChHhHHHHH
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS------------LG-DKF-D-KSLYEA---HPCLQAEDIANTV 200 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~------------~~-~~~-~-~~~~~~---~~~~~pedvA~~v 200 (214)
++++.++ .++.+. +||+|+||.++|++.... .. ... . ...... ...++|||||+++
T Consensus 166 ~~~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 241 (262)
T 1zem_A 166 ALTETAA----LDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV 241 (262)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred HHHHHHH----HHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 9999999 777654 999999999999876431 11 111 1 111111 2356999999999
Q ss_pred HHHhcCCC
Q psy818 201 EFILSSPP 208 (214)
Q Consensus 201 ~fl~s~p~ 208 (214)
+||+|...
T Consensus 242 ~~l~s~~~ 249 (262)
T 1zem_A 242 AFLLGDDS 249 (262)
T ss_dssp HHHHSGGG
T ss_pred HHHcCchh
Confidence 99998653
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.49 E-value=4.4e-15 Score=118.65 Aligned_cols=126 Identities=16% Similarity=0.255 Sum_probs=83.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 155 (250)
T 2fwm_X 76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKS 155 (250)
T ss_dssp CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHH
Confidence 55666544322 245666778899999999 67899999997643 789998765 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchh-hH-hH----------HhhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF-DK-SL----------YEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~-~~-~~----------~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+. +||+|+||.+.|++......... .. .. .....+++|||||++++||+|.+
T Consensus 156 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 231 (250)
T 2fwm_X 156 LALSVG----LELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL 231 (250)
T ss_dssp HHHHHH----HHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999 777653 99999999999997643211110 01 11 11123569999999999999875
Q ss_pred C
Q psy818 208 P 208 (214)
Q Consensus 208 ~ 208 (214)
.
T Consensus 232 ~ 232 (250)
T 2fwm_X 232 A 232 (250)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-14 Score=116.73 Aligned_cols=124 Identities=15% Similarity=0.149 Sum_probs=92.0
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|+++ + ++++|.++. .|+++|+|+.
T Consensus 74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 153 (254)
T 1zmt_A 74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGAC 153 (254)
T ss_dssp CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHH
Confidence 5566654432 2345667778999999999 6789999999764 3 889998765 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccch---------hhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLV---------KSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~---------~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
+++++++ .++.+. +||+|+||.+ +|++.... .......... ...++|||||++++||+|.
T Consensus 154 ~~~~~la----~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~--~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~ 227 (254)
T 1zmt_A 154 TLANALS----KELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN--PEHVAHVKKVTALQRLGTQKELGELVAFLASG 227 (254)
T ss_dssp HHHHHHH----HHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC--HHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred HHHHHHH----HHhhhcCcEEEEEecCccccccccccCCCcccccC--hHHHHHHhccCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999 777653 9999999999 88876431 1111111122 2356999999999999997
Q ss_pred CC
Q psy818 207 PP 208 (214)
Q Consensus 207 p~ 208 (214)
+.
T Consensus 228 ~~ 229 (254)
T 1zmt_A 228 SC 229 (254)
T ss_dssp SC
T ss_pred cc
Confidence 64
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=8.1e-15 Score=117.52 Aligned_cols=126 Identities=14% Similarity=0.159 Sum_probs=91.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 158 (256)
T 2d1y_A 79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVN 158 (256)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHH
Confidence 55667554322 235666778899999999 67899999998764 889998764 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhcccc----C-CchhhHhHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS----L-GDKFDKSLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~----~-~~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+. +||+|+||.++|++.... . .......... ...+++|||||++++||++.+.
T Consensus 159 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~ 231 (256)
T 2d1y_A 159 LTRSLA----LDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKA 231 (256)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 999999 677654 999999999999875431 1 1111111111 1235699999999999998753
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-14 Score=115.89 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=85.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 168 (253)
T 2nm0_A 89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVG 168 (253)
T ss_dssp SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence 44555433221 235567788999999999 56889999997643 889998865 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+. +||+|+||.++|++..... .......... ..+++|||||++++||++.+.
T Consensus 169 ~~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~ 235 (253)
T 2nm0_A 169 FARSLA----RELGSRNITFNVVAPGFVDTDMTKVLT-DEQRANIVSQVPLGRYARPEEIAATVRFLASDDA 235 (253)
T ss_dssp HHHHHH----HHHCSSSEEEEEEEECSBCC----------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHhhhcCeEEEEEEeCcCcCcchhhcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999999 777654 9999999999999865321 1111111111 235699999999999998754
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=5.8e-15 Score=118.57 Aligned_cols=126 Identities=14% Similarity=0.128 Sum_probs=88.2
Q ss_pred CceecCCC-cee-------eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc------HHHHH
Q psy818 79 NGRFKTNT-RLC-------LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS------DYERR 135 (214)
Q Consensus 79 ~~~~h~ng-~ic-------~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~------~Y~a~ 135 (214)
++++|+.| ++. .++.+.+.++|+.++++| .+++++++.|.+++ ++++|.++. .|+++
T Consensus 85 d~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~Y~as 164 (260)
T 2qq5_A 85 DVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVG 164 (260)
T ss_dssp CEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCSSHHHHHH
T ss_pred eEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCCCCchHHH
Confidence 45667553 332 346677778899999888 56788899997643 789998764 79999
Q ss_pred HHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh--HhHHh--hCC---CCChHhHHHHHHHHhcC
Q psy818 136 QLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD--KSLYE--AHP---CLQAEDIANTVEFILSS 206 (214)
Q Consensus 136 K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~--~~~~~--~~~---~~~pedvA~~v~fl~s~ 206 (214)
|+|+.+++++++ .++.+. +||+|+||.++|++.......... ..... ..+ ..+|||||++++||+|.
T Consensus 165 K~a~~~~~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~ 240 (260)
T 2qq5_A 165 KAACDKLAADCA----HELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATD 240 (260)
T ss_dssp HHHHHHHHHHHH----HHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHH----HHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcC
Confidence 999999999999 677653 999999999999986532211100 00001 111 24899999999999997
Q ss_pred CC
Q psy818 207 PP 208 (214)
Q Consensus 207 p~ 208 (214)
++
T Consensus 241 ~~ 242 (260)
T 2qq5_A 241 PN 242 (260)
T ss_dssp TT
T ss_pred cc
Confidence 65
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.49 E-value=5.4e-15 Score=118.62 Aligned_cols=126 Identities=18% Similarity=0.170 Sum_probs=91.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|+++ + +++||.++. .|+++|+|+.
T Consensus 83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 162 (258)
T 3a28_C 83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVR 162 (258)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHHH
Confidence 45666544322 245566778999999999 6789999999642 4 789998764 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccC--------C--chhhHhHHhh---CCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL--------G--DKFDKSLYEA---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~--------~--~~~~~~~~~~---~~~~~pedvA~~v~fl~s 205 (214)
++++.++ .++.+. +||+|+||.++|++..... . .......... ..+++|||||++++||+|
T Consensus 163 ~~~~~la----~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s 238 (258)
T 3a28_C 163 GLTQAAA----QELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLAS 238 (258)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHH----HHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhC
Confidence 9999999 777654 9999999999999864311 1 1111111111 235699999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
.+.
T Consensus 239 ~~~ 241 (258)
T 3a28_C 239 ENS 241 (258)
T ss_dssp GGG
T ss_pred ccc
Confidence 653
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-15 Score=120.85 Aligned_cols=114 Identities=14% Similarity=0.048 Sum_probs=85.4
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc------HHHHHHHHHHHHHhhccCcchhhhCc-
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS------DYERRQLAARSLRFNLNDKNFCELFP- 156 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~------~Y~a~K~a~~~~~~~l~~~~~~e~~~- 156 (214)
++.+.+.++|+..+++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.+++++++ .++.+
T Consensus 107 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~Y~asKaa~~~l~~~la----~e~~~~ 182 (269)
T 2h7i_A 107 PFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVA----REAGKY 182 (269)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHHHHH----HHHHTT
T ss_pred ccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccCchHHHHHHHHHHHHHHHHHH----HHhccc
Confidence 45566778899999999 67899999997655 788877643 79999999999999999 77765
Q ss_pred -ccccccCccchhhhhccccC----Cchh-------hHhHHh---hC-CCCChHhHHHHHHHHhcCCC
Q psy818 157 -DLVQSISPGLVKSQIFKSSL----GDKF-------DKSLYE---AH-PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 157 -~~vn~v~pg~~~t~~~~~~~----~~~~-------~~~~~~---~~-~~~~pedvA~~v~fl~s~p~ 208 (214)
.+||+|+||.++|++..... .+.. ...... .. .+++|||||++++||+|...
T Consensus 183 gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~ 250 (269)
T 2h7i_A 183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWL 250 (269)
T ss_dssp TCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSC
T ss_pred CcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchh
Confidence 39999999999999764321 1110 011111 12 35699999999999999654
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=5.6e-15 Score=118.65 Aligned_cols=125 Identities=14% Similarity=0.209 Sum_probs=87.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 164 (260)
T 1x1t_A 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVG 164 (260)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHHH
Confidence 55667554322 235566778899999999 57899999997643 889998764 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC----------chhhHhH-H---hhCCCCChHhHHHHHHHHhc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG----------DKFDKSL-Y---EAHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~----------~~~~~~~-~---~~~~~~~pedvA~~v~fl~s 205 (214)
+++.++ .++.+. +||+|+||.++|++...... +...... . ....+++|||||++++||+|
T Consensus 165 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s 240 (260)
T 1x1t_A 165 FTKVTA----LETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHHH----HHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred HHHHHH----HHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence 999999 777654 99999999999998653211 0111111 1 11235699999999999998
Q ss_pred CC
Q psy818 206 SP 207 (214)
Q Consensus 206 ~p 207 (214)
.+
T Consensus 241 ~~ 242 (260)
T 1x1t_A 241 DA 242 (260)
T ss_dssp GG
T ss_pred hh
Confidence 64
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-14 Score=115.45 Aligned_cols=124 Identities=16% Similarity=0.156 Sum_probs=91.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ +++||.+.. .|+++|+|+.++
T Consensus 79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~~~~ 158 (245)
T 1uls_A 79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGL 158 (245)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCCCchhHHHHHHHHHHH
Confidence 55666544322 235566778899999999 66899999998754 788888621 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++++ .++.+. +||+|+||.++|++.... ........... ...++|||||++++||++.+
T Consensus 159 ~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~ 223 (245)
T 1uls_A 159 TRTLA----LELGRWGIRVNTLAPGFIETRMTAKV-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE 223 (245)
T ss_dssp HHHHH----HHHGGGTEEEEEEEECSBCCTTTSSS-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHH----HHHhHhCeEEEEEEeCcCcCcchhhc-CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999 677653 999999999999986532 22111112111 23569999999999999864
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=7.4e-15 Score=118.61 Aligned_cols=126 Identities=16% Similarity=0.166 Sum_probs=91.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCc-Cc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIE-MS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a-~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ ++++|.+ +. .|+++|+|+.
T Consensus 101 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~ 180 (267)
T 1vl8_A 101 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVA 180 (267)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHHHH
Confidence 44666544221 235566778899999999 67899999997754 7899987 54 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCC-chhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG-DKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+. +||+|+||.++|++...... .......... ..+++|||||++++||+|.+.
T Consensus 181 ~~~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~ 250 (267)
T 1vl8_A 181 SLTKALA----KEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEA 250 (267)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccc
Confidence 9999999 777653 99999999999987643211 1111111111 235699999999999998653
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=5.8e-15 Score=119.01 Aligned_cols=126 Identities=19% Similarity=0.228 Sum_probs=91.6
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 173 (267)
T 1iy8_A 94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVV 173 (267)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHHHH
Confidence 55666544221 245566778899999999 56889999997643 889998765 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhcccc--C-CchhhH----hHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS--L-GDKFDK----SLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~--~-~~~~~~----~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++++ .++.+. +||+|+||.+.|++.... . ...... ..... ..+++|||||++++||+|.+.
T Consensus 174 ~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~ 249 (267)
T 1iy8_A 174 GLTRNSA----VEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 249 (267)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHH----HHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccc
Confidence 9999999 777653 999999999999986431 0 111111 11111 235699999999999998653
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=6.6e-15 Score=117.79 Aligned_cols=124 Identities=14% Similarity=0.266 Sum_probs=92.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 93 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 172 (256)
T 3ezl_A 93 DVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG 172 (256)
T ss_dssp EEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHHHH
Confidence 33566444222 245667778899999999 66899999997754 889998865 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+. +||+|+||.++|++..... .......... ....+|||||++++||+|..
T Consensus 173 ~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~ 238 (256)
T 3ezl_A 173 FTMSLA----QEVATKGVTVNTVSPGYIGTDMVKAIR-PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEE 238 (256)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHTSC-HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHHHHhCCEEEEEEECcccCccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence 999999 666553 9999999999999876432 2222222222 23569999999999999865
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.2e-15 Score=118.32 Aligned_cols=128 Identities=14% Similarity=0.218 Sum_probs=80.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++. + ++++|.++. .|+++|+|+.++
T Consensus 77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 156 (245)
T 3e9n_A 77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGL 156 (245)
T ss_dssp SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHHHHHHH
Confidence 44666544221 235556667899999999 5689999999764 3 788998865 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcccc
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i 212 (214)
++.++ .++.+. +||+|+||.+.|++......... .......+++|||||++++||++.+....+
T Consensus 157 ~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~p~dvA~~i~~l~~~~~~~~~ 222 (245)
T 3e9n_A 157 ADAFR----KEEANNGIRVSTVSPGPTNTPMLQGLMDSQG--TNFRPEIYIEPKEIANAIRFVIDAGETTQI 222 (245)
T ss_dssp HHHHH----HHHGGGTCEEEEEEECCC------------------CCGGGSCHHHHHHHHHHHHTSCTTEEE
T ss_pred HHHHH----HHhhhcCeEEEEEecCCccCchhhhhhhhhh--cccccccCCCHHHHHHHHHHHHcCCCccce
Confidence 99999 777653 99999999999998754322111 111122357999999999999999876543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=8.3e-15 Score=117.68 Aligned_cols=125 Identities=15% Similarity=0.206 Sum_probs=91.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 89 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 168 (260)
T 2ae2_A 89 NILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQ 168 (260)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHHH
Confidence 44666544322 235566778899999999 67899999997654 889998764 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-H---hHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-K---SLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~---~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+. +||+|+||.++|++.......... . ..... ..+++|||||++++||+|.+
T Consensus 169 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~ 239 (260)
T 2ae2_A 169 LTRCLA----FEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 239 (260)
T ss_dssp HHHHHH----HHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999999 677653 999999999999986532221111 1 11122 23569999999999999864
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.48 E-value=5.7e-15 Score=118.44 Aligned_cols=108 Identities=19% Similarity=0.197 Sum_probs=79.5
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccC------C----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcch
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVER------S----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNF 151 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~------~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~ 151 (214)
+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.+++++++
T Consensus 103 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la---- 178 (257)
T 3tpc_A 103 PHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAA---- 178 (257)
T ss_dssp ECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHH----
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHHHHHHHHHHHHHHH----
Confidence 45567899999999 6789999999873 2 789998764 79999999999999999
Q ss_pred hhhCcc--cccccCccchhhhhccccCCchhhHhHHhh----CCCCChHhHHHHHHHHhcC
Q psy818 152 CELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA----HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 152 ~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~pedvA~~v~fl~s~ 206 (214)
.++.+. +||+|+||.+.|++......+ ........ ...++|||||++++||+|.
T Consensus 179 ~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~ 238 (257)
T 3tpc_A 179 RELARFGIRVVTIAPGIFDTPMMAGMPQD-VQDALAASVPFPPRLGRAEEYAALVKHICEN 238 (257)
T ss_dssp HHHGGGTEEEEEEEECCBSCC---------------CCSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred HHHHHcCeEEEEEEeCCCCChhhccCCHH-HHHHHHhcCCCCCCCCCHHHHHHHHHHHccc
Confidence 777664 999999999999987543211 11111111 2356999999999999986
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.48 E-value=8.4e-15 Score=117.43 Aligned_cols=108 Identities=13% Similarity=0.175 Sum_probs=82.6
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhcc--------CC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCc
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVE--------RS----PTLGSIEMS-------DYERRQLAARSLRFNLNDK 149 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~--------~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~ 149 (214)
+.+.++|+..+++| .+++++++.|.+ ++ ++++|.++. .|+++|+|+.+++++++
T Consensus 101 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la-- 178 (257)
T 3tl3_A 101 VFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIA-- 178 (257)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHH--
Confidence 35678899999999 678999999987 32 789999876 79999999999999999
Q ss_pred chhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh----CCCCChHhHHHHHHHHhcC
Q psy818 150 NFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA----HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 150 ~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~pedvA~~v~fl~s~ 206 (214)
.|+.+. +||+|+||.++|++..... +......... ...++|||||++++||+|.
T Consensus 179 --~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~ 238 (257)
T 3tl3_A 179 --RDLASHRIRVMTIAPGLFDTPLLASLP-EEARASLGKQVPHPSRLGNPDEYGALAVHIIEN 238 (257)
T ss_dssp --HHHGGGTEEEEEEEECSBCCTTC---C-HHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred --HHhcccCcEEEEEEecCccChhhhhcc-HHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcC
Confidence 777664 9999999999999876432 2222222122 2356999999999999986
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=8e-15 Score=117.71 Aligned_cols=126 Identities=21% Similarity=0.251 Sum_probs=92.6
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++++ +++||.++. .|+++|+|+.
T Consensus 93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 172 (260)
T 2zat_A 93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALL 172 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHH
Confidence 4566654432 2345666778899999999 67899999997654 789998765 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-H---hHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-K---SLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~---~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+. +||+|+||.+.|++.......... . .......+++|||||++++||+|.+.
T Consensus 173 ~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~ 242 (260)
T 2zat_A 173 GLTKNLA----VELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDA 242 (260)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGG
T ss_pred HHHHHHH----HHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence 9999999 677654 999999999999875432111111 1 11122346799999999999998754
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.3e-15 Score=119.43 Aligned_cols=109 Identities=19% Similarity=0.245 Sum_probs=82.1
Q ss_pred CCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-----------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 96 HPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-----------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 96 ~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-----------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
+.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+.+++++++ .++
T Consensus 118 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la----~e~ 193 (278)
T 3sx2_A 118 GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYA----NLL 193 (278)
T ss_dssp THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHH----HHH
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHH----HHH
Confidence 357899999999 6789999999763 2 889998754 69999999999999999 777
Q ss_pred Ccc--cccccCccchhhhhccccCCchhhHhHHh----------h--CCCCChHhHHHHHHHHhcCCC
Q psy818 155 FPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYE----------A--HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 155 ~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~----------~--~~~~~pedvA~~v~fl~s~p~ 208 (214)
.+. +||+|+||.++|++............... . ...++|||||++++||+|...
T Consensus 194 ~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~ 261 (278)
T 3sx2_A 194 AGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQA 261 (278)
T ss_dssp GGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGG
T ss_pred hccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhCccc
Confidence 654 99999999999998653211111100000 0 235699999999999998653
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=5.2e-15 Score=118.18 Aligned_cols=125 Identities=15% Similarity=0.212 Sum_probs=85.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 163 (249)
T 2ew8_A 84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG 163 (249)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHH
Confidence 55667544322 235566778899999999 56899999997643 889998765 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhcc-ccCCc--hhhHhH-HhhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFK-SSLGD--KFDKSL-YEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~-~~~~~--~~~~~~-~~~~~~~~pedvA~~v~fl~s~p 207 (214)
++++++ .++.+. +||+|+||.+.|++.. ..... ...... .....+++|||||++++||+|.+
T Consensus 164 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~~ 231 (249)
T 2ew8_A 164 FTRALA----SDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD 231 (249)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGG
T ss_pred HHHHHH----HHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcCcc
Confidence 999999 777654 9999999999999865 21101 111111 11123569999999999999864
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-14 Score=116.73 Aligned_cols=126 Identities=12% Similarity=0.170 Sum_probs=92.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 155 (264)
T 2dtx_A 76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIG 155 (264)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHH
Confidence 45666544322 245666778899999999 66899999998654 889998765 79999999999
Q ss_pred HHhhccCcchhhhCc-ccccccCccchhhhhccccC------Cc----hhhHhHHh---hCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP-DLVQSISPGLVKSQIFKSSL------GD----KFDKSLYE---AHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~-~~vn~v~pg~~~t~~~~~~~------~~----~~~~~~~~---~~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+||+|+||.++|++..... .. ........ ...+++|||||++++||++.+
T Consensus 156 ~~~~la----~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 231 (264)
T 2dtx_A 156 LTKSIA----LDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 231 (264)
T ss_dssp HHHHHH----HHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999 67766 49999999999998764321 11 11111111 123579999999999999865
Q ss_pred C
Q psy818 208 P 208 (214)
Q Consensus 208 ~ 208 (214)
.
T Consensus 232 ~ 232 (264)
T 2dtx_A 232 A 232 (264)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=9.4e-15 Score=117.10 Aligned_cols=126 Identities=14% Similarity=0.155 Sum_probs=91.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 160 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 160 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence 44666544322 245566778899999999 5789999999752 3 788998754 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccC----------CchhhHhHHhh---CCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL----------GDKFDKSLYEA---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~----------~~~~~~~~~~~---~~~~~pedvA~~v~fl~s 205 (214)
+++++++ .++.+. +||+|+||.+.|++..... ........... ..+++|||||++++||+|
T Consensus 161 ~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s 236 (256)
T 1geg_A 161 GLTQTAA----RDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLAS 236 (256)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHH----HHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999 777654 9999999999999764320 11111111111 235699999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
.+.
T Consensus 237 ~~~ 239 (256)
T 1geg_A 237 PDS 239 (256)
T ss_dssp GGG
T ss_pred ccc
Confidence 653
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2e-14 Score=117.41 Aligned_cols=105 Identities=14% Similarity=0.083 Sum_probs=81.7
Q ss_pred CCCCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 97 PDTWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 97 ~e~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+.+++++++ .++
T Consensus 140 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la----~e~ 215 (291)
T 1e7w_A 140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAA----LEL 215 (291)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHH----HHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHH----HHH
Confidence 67899999999 6789999999653 3 789998865 79999999999999999 777
Q ss_pred Ccc--cccccCccchhhhhccccCCchhhHhHHhh---C-CCCChHhHHHHHHHHhcCCC
Q psy818 155 FPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---H-PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 155 ~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~-~~~~pedvA~~v~fl~s~p~ 208 (214)
.+. +||+|+||.++|++ . ............ . ..++|||||++++||+|.+.
T Consensus 216 ~~~gI~vn~v~PG~v~T~~-~--~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~ 272 (291)
T 1e7w_A 216 APLQIRVNGVGPGLSVLVD-D--MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA 272 (291)
T ss_dssp GGGTEEEEEEEESSBCCGG-G--SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGG
T ss_pred HhcCeEEEEEeeCCccCCc-c--CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcc
Confidence 654 99999999999998 4 222211222111 2 35699999999999998643
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.8e-14 Score=114.86 Aligned_cols=125 Identities=14% Similarity=0.187 Sum_probs=81.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... ..+.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 165 (249)
T 3f9i_A 86 DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIG 165 (249)
T ss_dssp SEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHH
Confidence 45667544322 234566778999999999 67889999997643 788998865 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.+.|++..... .......... ....+|||||++++||++.++
T Consensus 166 ~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 232 (249)
T 3f9i_A 166 MTKSLS----YEVATRGITVNAVAPGFIKSDMTDKLN-EKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNA 232 (249)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECCBC------CC-HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHHHHcCcEEEEEecCccccCcccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence 999999 666553 9999999999999875432 2222222222 235689999999999998654
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=4.2e-15 Score=119.66 Aligned_cols=112 Identities=17% Similarity=0.135 Sum_probs=81.3
Q ss_pred cCC-CCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 92 MSD-FHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 92 ~l~-~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
+.+ .+.++|+..+++| .+++++++.|++.+ ++++|.++. .|+++|+|+.+++++++ .++.+
T Consensus 112 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la----~e~~~ 187 (271)
T 3ek2_A 112 FLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLA----VSLGA 187 (271)
T ss_dssp TTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHH----HHHHT
T ss_pred cccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhHHHHHHHHHHHHHH----HHHHh
Confidence 444 6678899999999 67889999998655 788888765 89999999999999999 66655
Q ss_pred --ccccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 157 --DLVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 157 --~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
.+||+|+||.++|++.......... ...... ..+++|||||++++||+|..
T Consensus 188 ~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~ 244 (271)
T 3ek2_A 188 KGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDL 244 (271)
T ss_dssp TTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred cCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence 3999999999999987543211111 111122 23579999999999999864
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.8e-15 Score=123.86 Aligned_cols=125 Identities=20% Similarity=0.136 Sum_probs=90.8
Q ss_pred CceecCCCce---eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL---CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i---c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.
T Consensus 122 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~ 201 (315)
T 2o2s_A 122 DILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALE 201 (315)
T ss_dssp EEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHH
T ss_pred CEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHH
Confidence 4456654422 2346677778999999999 67899999997655 788887643 6999999999
Q ss_pred HHHhhccCcchhhhCc---ccccccCccchhhhhccccCC---chh---h-HhHH---hhCCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP---DLVQSISPGLVKSQIFKSSLG---DKF---D-KSLY---EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~---~~vn~v~pg~~~t~~~~~~~~---~~~---~-~~~~---~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++++++ .++.+ .|||+|+||.++|++...... ... . .... .....++|||||++++||+|..
T Consensus 202 ~l~~~la----~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 277 (315)
T 2o2s_A 202 SDTRTLA----WEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPL 277 (315)
T ss_dssp HHHHHHH----HHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHH----HHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCch
Confidence 9999999 77653 499999999999998643211 001 0 1111 1123569999999999999854
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-14 Score=115.24 Aligned_cols=124 Identities=10% Similarity=0.166 Sum_probs=89.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 162 (247)
T 1uzm_A 83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIG 162 (247)
T ss_dssp SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHH
Confidence 55666544322 235566778899999999 67899999997654 789998764 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+. +||+|+||.++|++.... ........... ..+++|||||++++||++.+
T Consensus 163 ~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 228 (247)
T 1uzm_A 163 MARSIA----RELSKANVTANVVAPGYIDTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASED 228 (247)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHHS-CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHhhhcCcEEEEEEeCCCcccchhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999 676553 999999999999986532 11111111111 23569999999999999864
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-14 Score=117.29 Aligned_cols=125 Identities=20% Similarity=0.305 Sum_probs=89.6
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc------------------HHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS------------------DYE 133 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~------------------~Y~ 133 (214)
++++|+.| +.....+.+.++|+..+++| .++++++++|...+ ++++|.++. .|+
T Consensus 101 d~lv~nAg-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~ 179 (287)
T 3pxx_A 101 DVVVANAG-ICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYS 179 (287)
T ss_dssp CEEEECCC-CCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHHHHHH
T ss_pred CEEEECCC-cCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCccchHH
Confidence 44666444 33222346678899999999 67899999996655 889997643 699
Q ss_pred HHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccC---------Cchhh----Hh--HHhh--CCCCChH
Q psy818 134 RRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---------GDKFD----KS--LYEA--HPCLQAE 194 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---------~~~~~----~~--~~~~--~~~~~pe 194 (214)
++|+|+.++++.++ .++.+. +||+|+||.++|++..... ..... .. .... .+.++||
T Consensus 180 asK~a~~~~~~~la----~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 255 (287)
T 3pxx_A 180 YAKQLVDSYTLQLA----AQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEAS 255 (287)
T ss_dssp HHHHHHHHHHHHHH----HHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHH
T ss_pred HHHHHHHHHHHHHH----HHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccCCCCCCHH
Confidence 99999999999999 777664 9999999999999864310 00000 00 0011 3367999
Q ss_pred hHHHHHHHHhcCCC
Q psy818 195 DIANTVEFILSSPP 208 (214)
Q Consensus 195 dvA~~v~fl~s~p~ 208 (214)
|||++++||+|..+
T Consensus 256 dva~~v~fL~s~~a 269 (287)
T 3pxx_A 256 DISNAVCFLASDES 269 (287)
T ss_dssp HHHHHHHHHHSGGG
T ss_pred HHHhhHheecchhh
Confidence 99999999998653
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-14 Score=117.36 Aligned_cols=126 Identities=13% Similarity=0.175 Sum_probs=91.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|...+ ++++|.++. .|+++|+|+.++
T Consensus 109 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~ 188 (283)
T 1g0o_A 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETF 188 (283)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHHHHH
Confidence 45666544322 235566778999999999 67899999995444 888887653 799999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccC----------CchhhHhHHh--h---CCCCChHhHHHHHHHHhc
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL----------GDKFDKSLYE--A---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~----------~~~~~~~~~~--~---~~~~~pedvA~~v~fl~s 205 (214)
+++++ .++.+. +||+|+||.+.|++..... .......... . ..+++|||||++++||+|
T Consensus 189 ~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s 264 (283)
T 1g0o_A 189 ARCMA----IDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLAS 264 (283)
T ss_dssp HHHHH----HHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHH----HHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhC
Confidence 99999 777653 9999999999998754321 0111111111 1 225699999999999999
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
.+.
T Consensus 265 ~~~ 267 (283)
T 1g0o_A 265 NDG 267 (283)
T ss_dssp GGG
T ss_pred ccc
Confidence 653
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-14 Score=117.23 Aligned_cols=125 Identities=14% Similarity=0.116 Sum_probs=91.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+
T Consensus 103 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~ 182 (267)
T 3gdg_A 103 DAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGC 182 (267)
T ss_dssp SEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHHHHHH
Confidence 44566444222 235667778999999999 67899999997643 788887643 799999999
Q ss_pred HHHHhhccCcchhhhCcc-cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 140 RSLRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
.++++.++ .++.+. +||+|+||.++|++.... ........... ...++|||||++++||+|...
T Consensus 183 ~~~~~~la----~e~~~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~ 250 (267)
T 3gdg_A 183 IHMARSLA----NEWRDFARVNSISPGYIDTGLSDFV-PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDAS 250 (267)
T ss_dssp HHHHHHHH----HHTTTTCEEEEEEECCEECSCGGGS-CHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTC
T ss_pred HHHHHHHH----HHhccCcEEEEEECCccccchhhhC-CHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCcc
Confidence 99999999 777665 999999999999987543 22222222222 224589999999999998653
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-14 Score=114.60 Aligned_cols=125 Identities=14% Similarity=0.142 Sum_probs=90.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+
T Consensus 72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~ 151 (239)
T 2ekp_A 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL 151 (239)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence 45666544222 345667778899999999 67899999997643 788887642 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccC-CchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL-GDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~-~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
.++++.++ .++.+. +||+|+||.+.|++..... ........... ..+.+|||||++++||+|.+
T Consensus 152 ~~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 221 (239)
T 2ekp_A 152 LGLTRALA----KEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDE 221 (239)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHH----HHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 99999999 777654 9999999999999864321 11111111111 22569999999999999864
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.3e-14 Score=115.30 Aligned_cols=123 Identities=11% Similarity=0.152 Sum_probs=89.2
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a~ 139 (214)
++++|+.|.. ..++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+
T Consensus 98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~ 177 (260)
T 3un1_A 98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGL 177 (260)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHH
Confidence 4456644422 1245667778999999999 67889999998765 788886642 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
.+++++++ .++.+. +||+|+||.+.|++..... ............+++|||||++++||...
T Consensus 178 ~~l~~~la----~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~~~~~p~~r~~~~~dva~av~~L~~~ 241 (260)
T 3un1_A 178 NAVTRSLA----MEFSRSGVRVNAVSPGVIKTPMHPAET-HSTLAGLHPVGRMGEIRDVVDAVLYLEHA 241 (260)
T ss_dssp HHHHHHHH----HHTTTTTEEEEEEEECCBCCTTSCGGG-HHHHHTTSTTSSCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHH----HHhCcCCeEEEEEeecCCCCCCCCHHH-HHHHhccCCCCCCcCHHHHHHHHHHhccc
Confidence 99999999 777664 9999999999999864311 00111111222356999999999999543
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-14 Score=119.93 Aligned_cols=118 Identities=9% Similarity=0.084 Sum_probs=89.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+.++++| .++++++++|++++ ++++|.++. .|+++|+|+
T Consensus 131 DilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal 210 (346)
T 3kvo_A 131 DILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGM 210 (346)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHHHHHHHHH
Confidence 44556544322 246677778999999999 67899999998764 788888753 799999999
Q ss_pred HHHHhhccCcchhhhCc-ccccccCccc-hhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 140 RSLRFNLNDKNFCELFP-DLVQSISPGL-VKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~-~~vn~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
.++++.++ .|+.. .+||+|+||. ++|++.+...... ......+|||||++++||+|.
T Consensus 211 ~~l~~~la----~e~~~gIrvn~v~PG~~i~T~~~~~~~~~~------~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 211 SMYVLGMA----EEFKGEIAVNALWPKTAIHTAAMDMLGGPG------IESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp HHHHHHHH----HHTTTTCEEEEEECSBCBCCHHHHHHCC--------CGGGCBCTHHHHHHHHHHHTS
T ss_pred HHHHHHHH----HHhcCCcEEEEEeCCCccccHHHHhhcccc------ccccCCCHHHHHHHHHHHHhc
Confidence 99999999 66653 4999999995 8998764322111 112357999999999999997
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.45 E-value=8.8e-15 Score=117.52 Aligned_cols=126 Identities=17% Similarity=0.192 Sum_probs=89.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 166 (260)
T 2z1n_A 87 DILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIG 166 (260)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHHH
Confidence 44666544222 235566778899999999 56799999997653 889998765 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhcccc---------CCchh-hHhHHh---hCCCCChHhHHHHHHHHhcC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSS---------LGDKF-DKSLYE---AHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~---------~~~~~-~~~~~~---~~~~~~pedvA~~v~fl~s~ 206 (214)
+++.++ .++.+. +||+|+||.+.|++.... ..... ...... ....++|||||++++||+|.
T Consensus 167 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~ 242 (260)
T 2z1n_A 167 VVRTLA----LELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASE 242 (260)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSG
T ss_pred HHHHHH----HHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence 999999 777653 999999999999986511 11111 111111 12246999999999999986
Q ss_pred CC
Q psy818 207 PP 208 (214)
Q Consensus 207 p~ 208 (214)
+.
T Consensus 243 ~~ 244 (260)
T 2z1n_A 243 KA 244 (260)
T ss_dssp GG
T ss_pred cc
Confidence 53
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=9.8e-15 Score=118.24 Aligned_cols=125 Identities=16% Similarity=0.068 Sum_probs=91.2
Q ss_pred CceecCCCcee-----eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-----LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-----~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++.+ +++||.++. .|+++|+|+
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 165 (275)
T 2pd4_A 86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAAL 165 (275)
T ss_dssp EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHHH
T ss_pred CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHHHHH
Confidence 34566544322 245566778899999999 67889999997645 889997754 799999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
.++++.++ .++.+ .+||+|+||.++|++......... ....... ...++|||||++++||+|.+
T Consensus 166 ~~~~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~ 235 (275)
T 2pd4_A 166 ESAVRYLA----VDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSL 235 (275)
T ss_dssp HHHHHHHH----HHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHH----HHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcc
Confidence 99999999 67655 399999999999998654221111 1111122 23569999999999999854
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=1e-14 Score=116.12 Aligned_cols=125 Identities=16% Similarity=0.217 Sum_probs=91.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... ..+.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 163 (247)
T 3lyl_A 84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIG 163 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHH
Confidence 44666544322 235566778899999999 57889999987643 789998754 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++++ .++.+. +||+|+||.+.|++..... .......... ....+|||||++++||++...
T Consensus 164 ~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~ 230 (247)
T 3lyl_A 164 FSKSLA----YEVASRNITVNVVAPGFIATDMTDKLT-DEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEA 230 (247)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCTTTTTSC-HHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHHHHcCeEEEEEeeCcEecccchhcc-HHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCc
Confidence 999999 666543 9999999999999876432 2221111112 235699999999999998653
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-14 Score=115.87 Aligned_cols=126 Identities=17% Similarity=0.207 Sum_probs=92.5
Q ss_pred CCceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 78 PNGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 78 ~~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
.++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.
T Consensus 82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 161 (249)
T 1o5i_A 82 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALT 161 (249)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHH
Confidence 355777655322 235566778899999999 56889999997654 789998765 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhH-hHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDK-SLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~-~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+. +||+|+||.+.|++..... ..... ..... ..+++|||||++++||++.+.
T Consensus 162 ~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~ 230 (249)
T 1o5i_A 162 GFLKTLS----FEVAPYGITVNCVAPGWTETERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKA 230 (249)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCCTTHHHHS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhhhcCeEEEEEeeCCCccCcccccc-hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 9999999 676553 9999999999999764321 11111 11111 235699999999999998653
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-14 Score=117.15 Aligned_cols=125 Identities=20% Similarity=0.112 Sum_probs=91.0
Q ss_pred CceecCCCcee-----eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-----LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-----~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+.+ +++||.++. .|+++|+|+
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 167 (261)
T 2wyu_A 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAAL 167 (261)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHHH
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHHHHH
Confidence 44566544321 235566778899999999 67889999887544 888997754 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchh-hHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF-DKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
.++++.++ .++.+. +||+|+||.+.|++......... ........ ..++|||||++++||+|.+
T Consensus 168 ~~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~ 237 (261)
T 2wyu_A 168 EASVRYLA----YELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237 (261)
T ss_dssp HHHHHHHH----HHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHH----HHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence 99999999 777654 99999999999987643221111 11111222 2569999999999999864
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-14 Score=117.27 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=85.2
Q ss_pred CCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc--
Q psy818 95 FHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD-- 157 (214)
Q Consensus 95 ~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~-- 157 (214)
.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+++++++ .++.+.
T Consensus 127 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~la----~e~~~~gi 202 (280)
T 3nrc_A 127 VTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTA----LALGEDGI 202 (280)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHH----HHHGGGTC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHH----HHHHHcCc
Confidence 5667899999999 67889999998654 788988765 89999999999999999 777654
Q ss_pred cccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 158 LVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 158 ~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+||+|+||.++|++.......... ...... ...++|||||++++||++..
T Consensus 203 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~ 256 (280)
T 3nrc_A 203 KVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDM 256 (280)
T ss_dssp EEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGG
T ss_pred EEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence 999999999999987654322221 212222 23579999999999999864
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-14 Score=115.51 Aligned_cols=126 Identities=20% Similarity=0.212 Sum_probs=91.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 166 (263)
T 3ai3_A 87 DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMM 166 (263)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHHH
Confidence 55667544322 345666778899999999 67899999997643 889998765 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC---------chh-hHhHHh----hCCCCChHhHHHHHHHHhc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG---------DKF-DKSLYE----AHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~---------~~~-~~~~~~----~~~~~~pedvA~~v~fl~s 205 (214)
+++.++ .++.+. +||+|+||.+.|++...... ... ...... ...+++|||||++++||++
T Consensus 167 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s 242 (263)
T 3ai3_A 167 FSKTLA----TEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCS 242 (263)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTS
T ss_pred HHHHHH----HHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcC
Confidence 999999 677653 99999999999987543110 111 111111 1235799999999999999
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
.+.
T Consensus 243 ~~~ 245 (263)
T 3ai3_A 243 ERA 245 (263)
T ss_dssp TTC
T ss_pred ccc
Confidence 754
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=5.2e-15 Score=121.10 Aligned_cols=125 Identities=20% Similarity=0.143 Sum_probs=90.9
Q ss_pred CceecCCCce---eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL---CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i---c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|++.+ ++++|.++. .|+++|+|+.
T Consensus 121 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~ 200 (297)
T 1d7o_A 121 DILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALE 200 (297)
T ss_dssp EEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHH
T ss_pred CEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHH
Confidence 4456654421 2346667778999999999 67899999997655 788887642 6999999999
Q ss_pred HHHhhccCcchhhhCc---ccccccCccchhhhhccccCC-chhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP---DLVQSISPGLVKSQIFKSSLG-DKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~---~~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++++++ .++.+ .+||+|+||.++|++...... +......... ...++|||||++++||+|..
T Consensus 201 ~~~~~la----~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~ 270 (297)
T 1d7o_A 201 SDTRVLA----FEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPL 270 (297)
T ss_dssp HHHHHHH----HHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHH----HHhCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCcc
Confidence 9999999 77753 499999999999998653211 1111111112 23569999999999999854
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.4e-14 Score=116.08 Aligned_cols=126 Identities=14% Similarity=0.118 Sum_probs=91.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 160 (254)
T 1hdc_A 81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRG 160 (254)
T ss_dssp CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHH
Confidence 55667544221 235566778899999999 56789999997643 889998764 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCch--hhHhHHhhCCCC-ChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDK--FDKSLYEAHPCL-QAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~--~~~~~~~~~~~~-~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+. +||+|+||.+.|++........ ...........+ +|||||++++||+|.+.
T Consensus 161 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~ 228 (254)
T 1hdc_A 161 LSKLAA----VELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS 228 (254)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchh
Confidence 999999 677654 9999999999998764321110 000011112356 99999999999998653
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-15 Score=125.20 Aligned_cols=114 Identities=23% Similarity=0.178 Sum_probs=71.1
Q ss_pred eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 90 LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 90 ~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
.++.+.+.++|+.++++| .+++++++.|.+.+ ++++|.++. .|+++|+|+.+++++++ .++
T Consensus 149 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la----~el 224 (319)
T 2ptg_A 149 KPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLA----FEA 224 (319)
T ss_dssp SCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHH----HHH
T ss_pred CccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHH----HHh
Confidence 346677778999999999 67899999997655 788887753 69999999999999999 777
Q ss_pred Cc---ccccccCccchhhhhccccCCc--h-h---h-H---hHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 155 FP---DLVQSISPGLVKSQIFKSSLGD--K-F---D-K---SLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 155 ~~---~~vn~v~pg~~~t~~~~~~~~~--~-~---~-~---~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
.+ .|||+|+||.++|++....... . . . . ........++|||||++++||+|..
T Consensus 225 ~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~ 290 (319)
T 2ptg_A 225 GRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPL 290 (319)
T ss_dssp HHHHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGG
T ss_pred ccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcc
Confidence 53 4999999999999986532110 0 0 0 0 0011123569999999999999854
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-14 Score=115.59 Aligned_cols=126 Identities=18% Similarity=0.135 Sum_probs=91.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.++
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 161 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSAL 161 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHHHHHH
Confidence 55667544322 245666778899999999 57889999998764 889998765 799999999999
Q ss_pred HhhccCcchhhhC----cccccccCccchhhhhccccCCchhhHh-HHh------hCCCCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELF----PDLVQSISPGLVKSQIFKSSLGDKFDKS-LYE------AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~----~~~vn~v~pg~~~t~~~~~~~~~~~~~~-~~~------~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++++ .++. +.+||+|+||.+.|++............ ... ...+++|||||++++||+|.+.
T Consensus 162 ~~~la----~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 234 (253)
T 1hxh_A 162 TRAAA----LSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES 234 (253)
T ss_dssp HHHHH----HHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGG
T ss_pred HHHHH----HHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccc
Confidence 99999 5554 3499999999999998643211111111 111 1224599999999999998753
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-14 Score=114.90 Aligned_cols=126 Identities=16% Similarity=0.209 Sum_probs=81.7
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-----C---CCCCCCcCc-------HHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-----S---PTLGSIEMS-------DYERRQ 136 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-----~---v~i~S~a~~-------~Y~a~K 136 (214)
++++|+.|... ..+.+.+.++|+..+++| .+++++++.|.++ . ++++|.++. .|+++|
T Consensus 85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK 164 (261)
T 3n74_A 85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATK 164 (261)
T ss_dssp CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHH
Confidence 44666544322 234556678899999999 6789999999764 2 788888765 699999
Q ss_pred HHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCc---hhhHhHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 137 LAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD---KFDKSLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~---~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+.+++++++ .++.+. +||+|+||.++|++....... ........ ....++|||||++++||+|...
T Consensus 165 aa~~~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 240 (261)
T 3n74_A 165 GWVVSVTKALA----IELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQA 240 (261)
T ss_dssp HHHHHHHHHHH----HHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHH----HHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcc
Confidence 99999999999 777654 999999999999987643211 11111111 1235699999999999998543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.4e-14 Score=115.97 Aligned_cols=126 Identities=15% Similarity=0.167 Sum_probs=91.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 160 (255)
T 2q2v_A 81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVG 160 (255)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHH
Confidence 55677544322 235566778899999999 47899999997764 889998765 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC--chh---h----HhH-Hhh---CCCCChHhHHHHHHHHhcC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG--DKF---D----KSL-YEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~--~~~---~----~~~-~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
+++.++ .++.+. +||+|+||.+.|++...... ... . ... ... ..+++|||||++++||++.
T Consensus 161 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 236 (255)
T 2q2v_A 161 LTKVVG----LETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSE 236 (255)
T ss_dssp HHHHHH----HHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSG
T ss_pred HHHHHH----HHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCC
Confidence 999999 777653 99999999999987643110 000 0 111 111 2256999999999999986
Q ss_pred CC
Q psy818 207 PP 208 (214)
Q Consensus 207 p~ 208 (214)
+.
T Consensus 237 ~~ 238 (255)
T 2q2v_A 237 AG 238 (255)
T ss_dssp GG
T ss_pred cc
Confidence 54
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-14 Score=117.50 Aligned_cols=125 Identities=12% Similarity=0.120 Sum_probs=87.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... ..+.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 109 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 188 (271)
T 4iin_A 109 SYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIA 188 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHHH
Confidence 44566444222 234566778899999999 57889999997654 789998754 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhH---HhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSL---YEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~---~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+ .+||+|+||.++|++....... ..... .......+|||||++++||+|.+.
T Consensus 189 ~~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~ 255 (271)
T 4iin_A 189 MSKSFA----YEGALRNIRFNSVTPGFIETDMNANLKDE-LKADYVKNIPLNRLGSAKEVAEAVAFLLSDHS 255 (271)
T ss_dssp HHHHHH----HHHHTTTEEEEEEEECSBCCC-------------CGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHHHHhCcEEEEEEeCcccCCchhhhcHH-HHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCc
Confidence 999999 66654 3999999999999987543221 11111 122235699999999999998654
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.6e-14 Score=116.27 Aligned_cols=125 Identities=19% Similarity=0.120 Sum_probs=89.6
Q ss_pred CceecCCCcee-----eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHH
Q psy818 79 NGRFKTNTRLC-----LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic-----~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a 138 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + +++||.++. .|+++|+|
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 180 (285)
T 2p91_A 101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKAA 180 (285)
T ss_dssp CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHHHHH
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHHHHH
Confidence 45666544322 235566778899999999 6788999999754 3 889997754 79999999
Q ss_pred HHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 139 ARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+.++++.++ .++.+ .+||+|+||.+.|++......... ....... ..+++|||||++++||+|.+
T Consensus 181 ~~~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~ 251 (285)
T 2p91_A 181 LESTVRYLA----YDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDW 251 (285)
T ss_dssp HHHHHHHHH----HHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHH----HHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence 999999999 67755 399999999999987643211111 1111112 23569999999999999854
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-14 Score=116.80 Aligned_cols=112 Identities=14% Similarity=0.116 Sum_probs=84.8
Q ss_pred cCC-CCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 92 MSD-FHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 92 ~l~-~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
+.+ .+.++|+..+++| .+++++++.|.+.+ +++||.++. .|+++|+|+.++++.++ .++.+
T Consensus 107 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la----~e~~~ 182 (265)
T 1qsg_A 107 YVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMA----NAMGP 182 (265)
T ss_dssp HHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHH----HHHTT
T ss_pred ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHHHHHHHHHHHHHH----HHhhh
Confidence 444 6678899999999 67889999997644 888987754 79999999999999999 77765
Q ss_pred c--cccccCccchhhhhccccCCchh-hHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGDKF-DKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
. +||+|+||.++|++......... ....... ...++|||||++++||+|.+
T Consensus 183 ~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~ 239 (265)
T 1qsg_A 183 EGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL 239 (265)
T ss_dssp TTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred cCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence 3 99999999999997653221111 1111112 22569999999999999864
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=2.6e-14 Score=114.81 Aligned_cols=125 Identities=14% Similarity=0.198 Sum_probs=89.7
Q ss_pred CceecCCCc-ee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCC-cC-c-------HHHHHHH
Q psy818 79 NGRFKTNTR-LC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSI-EM-S-------DYERRQL 137 (214)
Q Consensus 79 ~~~~h~ng~-ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~-a~-~-------~Y~a~K~ 137 (214)
++++|+.|. .. .++.+.+.++|+..+++| .+++++++.|++++ ++++|. ++ . .|+++|+
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKa 166 (264)
T 3i4f_A 87 DFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKV 166 (264)
T ss_dssp CEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHH
T ss_pred CEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHH
Confidence 446665441 11 235566778899999999 67899999997654 777777 33 1 8999999
Q ss_pred HHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhH---HhhCCCCChHhHHHHHHHHhcCCC
Q psy818 138 AARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSL---YEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 138 a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~---~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
|+.+++++++ .++.+. +||+|+||.+.|++....... ..... ......++|||||++++||++.+.
T Consensus 167 a~~~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~ 237 (264)
T 3i4f_A 167 GLVSLTKTVA----YEEAEYGITANMVCPGDIIGEMKEATIQE-ARQLKEHNTPIGRSGTGEDIARTISFLCEDDS 237 (264)
T ss_dssp HHHHHHHHHH----HHHGGGTEEEEEEEECCCCGGGGSCCHHH-HHHC--------CCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHH----HHhhhcCcEEEEEccCCccCccchhccHH-HHHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 9999999999 676654 999999999999987543211 11111 112235699999999999998754
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-14 Score=115.13 Aligned_cols=127 Identities=14% Similarity=0.255 Sum_probs=91.5
Q ss_pred CCceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHH
Q psy818 78 PNGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAA 139 (214)
Q Consensus 78 ~~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~ 139 (214)
.++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+
T Consensus 75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~ 154 (246)
T 2ag5_A 75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAV 154 (246)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHH
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHH
Confidence 355677554322 235566778899999999 67899999997643 788887653 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCC-----chhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG-----DKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~-----~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
.++++.++ .++.+. +||+|+||.+.|++...... .......... ..+++|||||++++||+|.+.
T Consensus 155 ~~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~ 229 (246)
T 2ag5_A 155 IGLTKSVA----ADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDES 229 (246)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHH----HHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 99999999 777654 99999999999987543110 1111112111 225699999999999998653
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.1e-14 Score=116.53 Aligned_cols=125 Identities=15% Similarity=0.178 Sum_probs=90.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC------C--CCCCCCcCc--------HHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER------S--PTLGSIEMS--------DYERRQ 136 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~------~--v~i~S~a~~--------~Y~a~K 136 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|+++ + +++||.++. .|+++|
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK 186 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSK 186 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHH
Confidence 44666544221 245677778999999999 6689999999642 3 788888753 799999
Q ss_pred HHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHH-----hhCCCCChHhHHHHHHHHhcCCC
Q psy818 137 LAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLY-----EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~-----~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+.++++.++ .++.+. +||+|+||.++|++....... ...... ....+++|||||++++||++.+.
T Consensus 187 ~a~~~~~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 260 (276)
T 2b4q_A 187 AALHQLSRMLA----KELVGEHINVNVIAPGRFPSRMTRHIAND-PQALEADSASIPMGRWGRPEEMAALAISLAGTAG 260 (276)
T ss_dssp HHHHHHHHHHH----HHHGGGTEEEEEEEECCCCSTTTHHHHHC-HHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHH----HHhcccCeEEEEEEeccCcCcchhhcchh-HHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccc
Confidence 99999999999 777653 999999999999876432111 111111 11235699999999999998653
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-14 Score=124.04 Aligned_cols=126 Identities=13% Similarity=0.175 Sum_probs=87.5
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... ..+.+++.++|+.++++| .+++++.+.|..++ +++||+++. .|+++|+++.+
T Consensus 290 d~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~ 369 (454)
T 3u0b_A 290 DILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIG 369 (454)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred eEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHH
Confidence 44666544322 235677788999999999 67888899887643 889998865 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCch--hhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDK--FDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~--~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
|+++++ .++.+ .+||+|+||.++|++........ ...........++|||||++++||+|...
T Consensus 370 l~~~la----~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a 436 (454)
T 3u0b_A 370 LAEALA----PVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASPAS 436 (454)
T ss_dssp HHHHHH----HHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGG
T ss_pred HHHHHH----HHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCCcc
Confidence 999999 66654 39999999999999875432111 11111112235699999999999998543
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.42 E-value=3.5e-14 Score=114.73 Aligned_cols=126 Identities=13% Similarity=0.226 Sum_probs=84.0
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C---CCCCCCcCc--------HHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S---PTLGSIEMS--------DYERRQ 136 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~---v~i~S~a~~--------~Y~a~K 136 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|.+. + ++++|.++. .|+++|
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 185 (272)
T 4e3z_A 106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK 185 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHH
Confidence 44666544322 345566778899999999 6688899998762 2 788997753 699999
Q ss_pred HHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 137 LAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+.+++++++ .++.+. +||+|+||.++|++................ ...++|||||++++||++...
T Consensus 186 aa~~~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~ 258 (272)
T 4e3z_A 186 AAIDTFTIGLA----REVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSA 258 (272)
T ss_dssp HHHHHHHHHHH----HHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHH----HHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCcc
Confidence 99999999999 676653 999999999999986542211111111111 224589999999999998653
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.42 E-value=9.3e-15 Score=116.72 Aligned_cols=113 Identities=16% Similarity=0.217 Sum_probs=67.3
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc----HHHHHHHHHHHHHhhccCcchhhhCcc-
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS----DYERRQLAARSLRFNLNDKNFCELFPD- 157 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~----~Y~a~K~a~~~~~~~l~~~~~~e~~~~- 157 (214)
+.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|+|+.++++.++ .++.+.
T Consensus 105 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~Y~asK~a~~~~~~~la----~e~~~~g 180 (253)
T 3qiv_A 105 LLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNYYGLAKVGINGLTQQLS----RELGGRN 180 (253)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CCHHHHHHHHHHHH----HHTTTTT
T ss_pred cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCCchhHHHHHHHHHHHHHHH----HHHhhcC
Confidence 5566778899999999 56899999997654 889998876 79999999999999999 677543
Q ss_pred -cccccCccchhhhhccccCCchhhHhHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 158 -LVQSISPGLVKSQIFKSSLGDKFDKSLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 158 -~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+||+|+||.+.|++............... ....++|||||++++||++...
T Consensus 181 i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 235 (253)
T 3qiv_A 181 IRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEA 235 (253)
T ss_dssp EEEEEEEC-------------------------------CCHHHHHHHHHHSGGG
T ss_pred eEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccc
Confidence 99999999999997654322221111111 1235689999999999998653
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-14 Score=115.91 Aligned_cols=124 Identities=14% Similarity=0.121 Sum_probs=89.9
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.+
T Consensus 84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 163 (270)
T 1yde_A 84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTA 163 (270)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHHHHHH
Confidence 55667544321 245566778899999999 6789999998653 4 889998653 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccC---Cchh--hHhHHhh---CCCCChHhHHHHHHHHhcC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---GDKF--DKSLYEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---~~~~--~~~~~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
+++.++ .++.+. +||+|+||.+.|++..... .+.. ....... ...++|||||++++||+|.
T Consensus 164 ~~~~la----~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~ 234 (270)
T 1yde_A 164 MTKALA----LDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE 234 (270)
T ss_dssp HHHHHH----HHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc
Confidence 999999 777654 9999999999999764311 1111 1111111 2246999999999999985
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-14 Score=115.96 Aligned_cols=126 Identities=15% Similarity=0.230 Sum_probs=91.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHh--hccCC----CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSF--MVERS----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~--m~~~~----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++. |++++ ++++|.++. .|+++|+|+
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 180 (277)
T 2rhc_B 101 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 180 (277)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHHH
Confidence 44666544221 235566778899999999 668899998 86643 889998764 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCC----------chhhHhHHhh---CCCCChHhHHHHHHHHh
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG----------DKFDKSLYEA---HPCLQAEDIANTVEFIL 204 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~----------~~~~~~~~~~---~~~~~pedvA~~v~fl~ 204 (214)
.+++++++ .++.+. +||+|+||.+.|++...... .......... ..+++|||||++++||+
T Consensus 181 ~~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~ 256 (277)
T 2rhc_B 181 VGFTKALG----LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI 256 (277)
T ss_dssp HHHHHHHH----HHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHH----HHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 99999999 777654 99999999999987543210 1111111111 23569999999999999
Q ss_pred cCCC
Q psy818 205 SSPP 208 (214)
Q Consensus 205 s~p~ 208 (214)
+.+.
T Consensus 257 s~~~ 260 (277)
T 2rhc_B 257 GPGA 260 (277)
T ss_dssp SGGG
T ss_pred Cchh
Confidence 8753
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4.7e-14 Score=113.43 Aligned_cols=122 Identities=22% Similarity=0.231 Sum_probs=90.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 162 (260)
T 1nff_A 83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRG 162 (260)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHH
Confidence 55667544322 235666778899999999 56789999997643 889998764 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+. +||+|+||.+.|++.. . ...... .......++|||||++++||++.+
T Consensus 163 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~~~~-~~~~~~~~~~~dvA~~v~~l~s~~ 223 (260)
T 1nff_A 163 LTKSTA----LELGPSGIRVNSIHPGLVKTPMTD-W-VPEDIF-QTALGRAAEPVEVSNLVVYLASDE 223 (260)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECCBCSGGGT-T-SCTTCS-CCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHhCccCcEEEEEEeCCCCCCccc-c-chhhHH-hCccCCCCCHHHHHHHHHHHhCcc
Confidence 999999 777553 9999999999999764 1 111100 111123569999999999999864
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-14 Score=119.19 Aligned_cols=124 Identities=9% Similarity=0.124 Sum_probs=89.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYERR 135 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~a~ 135 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|.+. + ++++|.++. .|+++
T Consensus 116 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as 195 (322)
T 3qlj_A 116 DVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAA 195 (322)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTTCHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCCCccHHHH
Confidence 44556444222 245677788999999999 5688888888641 3 889998754 79999
Q ss_pred HHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 136 QLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 136 K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
|+|+.+++++++ .++.+. +||+|+|| +.|++.......... ........++|||||++++||+|...
T Consensus 196 Kaal~~l~~~la----~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-~~~~~~~~~~pedva~~v~~L~s~~~ 264 (322)
T 3qlj_A 196 KAGIATLTLVGA----AEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-TQDQDFDAMAPENVSPLVVWLGSAEA 264 (322)
T ss_dssp HHHHHHHHHHHH----HHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------CCTTCGGGTHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHH----HHhcccCcEEEEecCC-CCCccchhhhhhhhh-ccccccCCCCHHHHHHHHHHHhCccc
Confidence 999999999999 777664 99999999 889887654322111 11122235799999999999998653
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.41 E-value=3.1e-14 Score=113.85 Aligned_cols=106 Identities=11% Similarity=0.024 Sum_probs=83.6
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhC--
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELF-- 155 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~-- 155 (214)
+.+.+.++|+..+++| .+++++++.|++.+ +++||.++. .|+++|+|+.++++.++ .++.
T Consensus 104 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la----~e~~~~ 179 (251)
T 3orf_A 104 SSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLA----SENGGL 179 (251)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHT----STTSSS
T ss_pred ccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHH----HHhccc
Confidence 4455567899999999 57889999998765 889998865 89999999999999999 6653
Q ss_pred c--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 156 P--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 156 ~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+ .+||+|+||.++|++......... .....+|||||++++||++.|
T Consensus 180 ~~gi~v~~v~PG~v~t~~~~~~~~~~~------~~~~~~~~dva~~i~~l~~~~ 227 (251)
T 3orf_A 180 PAGSTSLGILPVTLDTPTNRKYMSDAN------FDDWTPLSEVAEKLFEWSTNS 227 (251)
T ss_dssp CTTCEEEEEEESCBCCHHHHHHCTTSC------GGGSBCHHHHHHHHHHHHHCG
T ss_pred CCCcEEEEEecCcCcCcchhhhccccc------ccccCCHHHHHHHHHHHhcCc
Confidence 3 399999999999998654322111 122479999999999999983
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.40 E-value=5.8e-14 Score=112.82 Aligned_cols=126 Identities=16% Similarity=0.217 Sum_probs=90.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 167 (263)
T 3ak4_A 88 DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVF 167 (263)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHH
Confidence 55677544322 235566778899999999 6788999998753 3 788988764 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccC-----C-----chhhHhHHhh---CCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL-----G-----DKFDKSLYEA---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~-----~-----~~~~~~~~~~---~~~~~pedvA~~v~fl~s 205 (214)
++++.++ .++.+. +||+|+||.+.|++..... . .......... ..+++|||||++++||++
T Consensus 168 ~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s 243 (263)
T 3ak4_A 168 GWTQALA----REMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLAS 243 (263)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHH----HHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999 677653 9999999999998754311 0 1111111111 235699999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
.+.
T Consensus 244 ~~~ 246 (263)
T 3ak4_A 244 DAA 246 (263)
T ss_dssp GGG
T ss_pred ccc
Confidence 653
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=7.2e-14 Score=112.59 Aligned_cols=124 Identities=19% Similarity=0.265 Sum_probs=89.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhc-cCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMV-ERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~-~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|. +++ ++++|.++. .|+++|+|+.
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 185 (267)
T 4iiu_A 106 YGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGII 185 (267)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHHH
Confidence 34556444222 235566778899999999 56777777775 332 789998754 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+. +||+|+||.++|++.... ........... ...+|||||++++||+|...
T Consensus 186 ~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~ 252 (267)
T 4iiu_A 186 GATKALA----IELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIA 252 (267)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 9999999 666653 999999999999987542 22222222222 25699999999999998643
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-14 Score=120.86 Aligned_cols=112 Identities=9% Similarity=-0.035 Sum_probs=83.5
Q ss_pred ecCCCCCCCCcCcccHH------HHHHHHH-HhhccCC---CCCCCCcCc---------HHHHHHHHHHHHHhhccCcch
Q psy818 91 SMSDFHPDTWNPAWSVS------TILTGLL-SFMVERS---PTLGSIEMS---------DYERRQLAARSLRFNLNDKNF 151 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn------~~l~a~~-~~m~~~~---v~i~S~a~~---------~Y~a~K~a~~~~~~~l~~~~~ 151 (214)
++.+++.++|+.++++| .+++++. +.|.+++ ||++|+++. .|+++|+|+.+++++++
T Consensus 186 ~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA---- 261 (405)
T 3zu3_A 186 VLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIR---- 261 (405)
T ss_dssp EECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHH----
T ss_pred cCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHH----
Confidence 35677889999999998 2455555 4565544 899998864 69999999999999999
Q ss_pred hhhCcc---cccccCccchhhhhccccCCchhh-HhHH-hhCCCCChHhHHHHHHHHhcC
Q psy818 152 CELFPD---LVQSISPGLVKSQIFKSSLGDKFD-KSLY-EAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 152 ~e~~~~---~vn~v~pg~~~t~~~~~~~~~~~~-~~~~-~~~~~~~pedvA~~v~fl~s~ 206 (214)
.|+++. |||+|+||.+.|++.......+.. .... .....++|||+|++++||+|.
T Consensus 262 ~Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 262 ESLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp HHHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 777664 999999999999987654322211 1111 112257999999999999984
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-13 Score=112.30 Aligned_cols=108 Identities=15% Similarity=0.197 Sum_probs=83.0
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhcc------C--C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcch
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVE------R--S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNF 151 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~------~--~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~ 151 (214)
+.+.++|+..+++| .+++++++.|.. + + ++++|.++. .|+++|+|+.++++.++
T Consensus 127 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la---- 202 (281)
T 3ppi_A 127 PADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAA---- 202 (281)
T ss_dssp BCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH----
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHH----
Confidence 34556789999999 678888998865 2 2 789998865 89999999999999999
Q ss_pred hhhCcc--cccccCccchhhhhccccCCchhhHhHHhh----CCCCChHhHHHHHHHHhcC
Q psy818 152 CELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA----HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 152 ~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~pedvA~~v~fl~s~ 206 (214)
.++.+. +||+|+||.++|++.... ........... ...++|||||++++||++.
T Consensus 203 ~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~ 262 (281)
T 3ppi_A 203 RDLSSAGIRVNTIAPGTMKTPIMESV-GEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN 262 (281)
T ss_dssp HHHGGGTEEEEEEEECSBCCHHHHTT-CHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHC
T ss_pred HHHhhcCeEEEEEecCcCCchhhhcc-cHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcC
Confidence 677653 999999999999987643 22222222222 2356999999999999985
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=5.7e-14 Score=115.13 Aligned_cols=125 Identities=17% Similarity=0.187 Sum_probs=89.8
Q ss_pred CceecCCCcee-ee--cCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc--------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LS--MSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS--------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~~--~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~--------~Y~a~K~a~ 139 (214)
++++|+.|... .+ +.+.+.++|+.++++| .+++++++.|+++ + ++++|.++. .|+++|+|+
T Consensus 108 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~Y~asKaa~ 187 (297)
T 1xhl_A 108 DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAAL 187 (297)
T ss_dssp CEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHHHH
T ss_pred CEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcchHHHHHHHH
Confidence 44666544221 22 5566778899999999 6789999999765 3 888887643 799999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccC-Cch-------hhHhHHh---hCCCCChHhHHHHHHHHhcC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL-GDK-------FDKSLYE---AHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~-~~~-------~~~~~~~---~~~~~~pedvA~~v~fl~s~ 206 (214)
.++++.++ .++.+. +||+|+||.++|++..... ... ....... ...+++|||||++++||++.
T Consensus 188 ~~l~~~la----~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~ 263 (297)
T 1xhl_A 188 DQYTRCTA----IDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR 263 (297)
T ss_dssp HHHHHHHH----HHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCH
T ss_pred HHHHHHHH----HHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence 99999999 676653 9999999999999865321 100 0011111 12356999999999999985
Q ss_pred C
Q psy818 207 P 207 (214)
Q Consensus 207 p 207 (214)
+
T Consensus 264 ~ 264 (297)
T 1xhl_A 264 N 264 (297)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.39 E-value=9.7e-14 Score=113.06 Aligned_cols=106 Identities=17% Similarity=0.136 Sum_probs=79.6
Q ss_pred CCCCCCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchh
Q psy818 95 FHPDTWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 95 ~~~e~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.++++.++ .
T Consensus 135 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la----~ 210 (288)
T 2x9g_A 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAA----L 210 (288)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHH----H
T ss_pred CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHH----H
Confidence 4556788999999 6788999999762 3 788998765 79999999999999999 7
Q ss_pred hhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCC-CChHhHHHHHHHHhcCC
Q psy818 153 ELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPC-LQAEDIANTVEFILSSP 207 (214)
Q Consensus 153 e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~-~~pedvA~~v~fl~s~p 207 (214)
++.+. +||+|+||.+.|++ . . ........... ... ++|||||++++||+|..
T Consensus 211 e~~~~gI~vn~v~PG~v~t~~-~-~-~~~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~ 268 (288)
T 2x9g_A 211 ELAPYGIRVNGVAPGVSLLPV-A-M-GEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS 268 (288)
T ss_dssp HHGGGTEEEEEEEESSCSCCT-T-S-CHHHHHHHHHTCTTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HhhccCeEEEEEEeccccCcc-c-c-ChHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCcc
Confidence 77654 99999999999998 3 1 12111222121 224 79999999999999864
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.4e-14 Score=121.84 Aligned_cols=112 Identities=8% Similarity=-0.042 Sum_probs=82.7
Q ss_pred cCCCCCCCCcCcccHH------HHHHHHHH-hhccCC---CCCCCCcCc---------HHHHHHHHHHHHHhhccCcchh
Q psy818 92 MSDFHPDTWNPAWSVS------TILTGLLS-FMVERS---PTLGSIEMS---------DYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn------~~l~a~~~-~m~~~~---v~i~S~a~~---------~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
+.+++.++|+.++++| .+++++.+ .|.+++ ||++|+++. .|+++|+|+.+++++|+ .
T Consensus 202 ~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA----~ 277 (422)
T 3s8m_A 202 IEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLN----A 277 (422)
T ss_dssp ECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHH----H
T ss_pred cCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHH----H
Confidence 3456778999999988 23555554 454443 899999875 57999999999999999 8
Q ss_pred hhCcc--cccccCccchhhhhccccCCchhh-HhH-HhhCCCCChHhHHHHHHHHhcCC
Q psy818 153 ELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSL-YEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 153 e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~-~~~~~~~~pedvA~~v~fl~s~p 207 (214)
|+++. |||+|+||.++|++.......+.. ... ......++|||||++++||+|..
T Consensus 278 Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 278 RLAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRER 336 (422)
T ss_dssp HHHTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred HhCccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence 88775 999999999999987653222211 111 11223679999999999999864
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=9.4e-14 Score=112.41 Aligned_cols=125 Identities=18% Similarity=0.173 Sum_probs=84.4
Q ss_pred CceecCCCcee-eecCCC----CCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcC-c-------HHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDF----HPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEM-S-------DYERRQL 137 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~----~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~-~-------~Y~a~K~ 137 (214)
++++|+.|... .++.+. +.++|+..+++| .+++++++.|+++ + +++||.++ . .|+++|+
T Consensus 88 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~ 167 (278)
T 1spx_A 88 DILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKA 167 (278)
T ss_dssp CEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHHHHHHH
T ss_pred CEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCccHHHHHHH
Confidence 45666544321 234444 667899999999 6789999999754 4 88999887 3 7999999
Q ss_pred HHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCC--chh------hHhHHh---hCCCCChHhHHHHHHHHh
Q psy818 138 AARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG--DKF------DKSLYE---AHPCLQAEDIANTVEFIL 204 (214)
Q Consensus 138 a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~--~~~------~~~~~~---~~~~~~pedvA~~v~fl~ 204 (214)
|+.++++.++ .++.+. +||+|+||.+.|++...... ... ...... ...+++|||||++++||+
T Consensus 168 a~~~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~ 243 (278)
T 1spx_A 168 AIDQYTRNTA----IDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA 243 (278)
T ss_dssp HHHHHHHHHH----HHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----HHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHc
Confidence 9999999999 676553 99999999999987643210 111 111111 123579999999999999
Q ss_pred cCC
Q psy818 205 SSP 207 (214)
Q Consensus 205 s~p 207 (214)
+.+
T Consensus 244 s~~ 246 (278)
T 1spx_A 244 DRK 246 (278)
T ss_dssp CHH
T ss_pred Ccc
Confidence 864
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=5.5e-14 Score=113.26 Aligned_cols=125 Identities=18% Similarity=0.164 Sum_probs=88.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc------HHHHHHHHHHHHHh
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS------DYERRQLAARSLRF 144 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~------~Y~a~K~a~~~~~~ 144 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|...+ +++||.++. .|+++|+|+.++++
T Consensus 82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~~~~~~ 161 (263)
T 2a4k_A 82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLAR 161 (263)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCCCcHHHHHHHHHHHHHHH
Confidence 44566443221 234566678899999999 67899999993234 889998865 79999999999999
Q ss_pred hccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 145 NLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 145 ~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++ .++.+. +||+|+||.+.|++.... ........... ..+++|||||++++||+|.+.
T Consensus 162 ~la----~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~ 225 (263)
T 2a4k_A 162 TLA----LELARKGVRVNVLLPGLIQTPMTAGL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEES 225 (263)
T ss_dssp HHH----HHHTTTTCEEEEEEECSBCCGGGTTS-CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHH----HHhhhhCcEEEEEEeCcCcCchhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999 777654 999999999999987542 22211212122 235699999999999998653
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4.1e-14 Score=112.34 Aligned_cols=120 Identities=12% Similarity=0.022 Sum_probs=88.1
Q ss_pred CceecCCCce-eeec-CCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSM-SDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~-l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.. ..++ .+.+.++|+..+++| .+++++++.|++.+ +++||.++. .|+++|+|+.++
T Consensus 78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 157 (241)
T 1dhr_A 78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQL 157 (241)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHH
T ss_pred CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHH
Confidence 3356654422 1233 455567899999999 56889999997655 889998765 799999999999
Q ss_pred HhhccCcchhhhC--c--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 143 RFNLNDKNFCELF--P--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 143 ~~~l~~~~~~e~~--~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++.++ .++. + .+||+|+||.++|++......... ......|||||++++||++...
T Consensus 158 ~~~la----~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~------~~~~~~~~~vA~~v~~l~~~~~ 217 (241)
T 1dhr_A 158 CQSLA----GKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEAD------FSSWTPLEFLVETFHDWITGNK 217 (241)
T ss_dssp HHHHT----STTSSCCTTCEEEEEEESCEECHHHHHHSTTSC------GGGSEEHHHHHHHHHHHHTTTT
T ss_pred HHHHH----HHhccCCCCeEEEEEecCcccCccccccCcchh------hccCCCHHHHHHHHHHHhcCCC
Confidence 99999 6665 4 399999999999998653211110 0123579999999999998654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.6e-13 Score=110.93 Aligned_cols=122 Identities=14% Similarity=0.114 Sum_probs=85.2
Q ss_pred CceecCCCcee-eecCCCCC-----------CCCcCcccHH-----HHHHHHHHhhcc-C------C--CCCCCCcCc--
Q psy818 79 NGRFKTNTRLC-LSMSDFHP-----------DTWNPAWSVS-----TILTGLLSFMVE-R------S--PTLGSIEMS-- 130 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~-----------e~w~~~~~vn-----~~l~a~~~~m~~-~------~--v~i~S~a~~-- 130 (214)
++++|+.|... .++.+.+. ++|+..+++| .+++++++.|.. . + ++++|.++.
T Consensus 96 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 175 (276)
T 1mxh_A 96 DVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP 175 (276)
T ss_dssp CEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSC
T ss_pred CEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCC
Confidence 45666544221 23555666 7899999999 678999999862 2 4 789998765
Q ss_pred -----HHHHHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CC-CCChHhHHHH
Q psy818 131 -----DYERRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HP-CLQAEDIANT 199 (214)
Q Consensus 131 -----~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~-~~~pedvA~~ 199 (214)
.|+++|+|+.++++.++ .++.+. +||+|+||.+.|+ . ............. .. .++|||||++
T Consensus 176 ~~~~~~Y~asK~a~~~l~~~la----~e~~~~gi~v~~v~PG~v~t~-~--~~~~~~~~~~~~~~p~~r~~~~~~dva~~ 248 (276)
T 1mxh_A 176 LPGFCVYTMAKHALGGLTRAAA----LELAPRHIRVNAVAPGLSLLP-P--AMPQETQEEYRRKVPLGQSEASAAQIADA 248 (276)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHH----HHHGGGTEEEEEEEESSBSCC-S--SSCHHHHHHHHTTCTTTSCCBCHHHHHHH
T ss_pred CCCCeehHHHHHHHHHHHHHHH----HHHhhcCeEEEEEecCcccCC-c--cCCHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 79999999999999999 777654 9999999999998 2 1222211212111 22 5799999999
Q ss_pred HHHHhcCC
Q psy818 200 VEFILSSP 207 (214)
Q Consensus 200 v~fl~s~p 207 (214)
++||++.+
T Consensus 249 v~~l~s~~ 256 (276)
T 1mxh_A 249 IAFLVSKD 256 (276)
T ss_dssp HHHHHSGG
T ss_pred HHHHhCcc
Confidence 99999864
|
| >3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.2e-12 Score=97.23 Aligned_cols=109 Identities=18% Similarity=0.275 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhcCCC---CCeEEeecCCCcccEEEEEECCCCCCCCCcE---EEEEEECCCCCCCCCCeEEEEc--CC-
Q psy818 9 TARLKQDYMKLKKDPI---PYVIAEPNPANILEWFYVVIGPENTQYEGGM---YLGKLVFPRDFPFKPPSIYMIT--PN- 79 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~---~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~---f~~~i~fp~~YP~~pP~v~f~t--~~- 79 (214)
.+|..+|+.++.+.-+ +...+...++...++.+.+.|...++|+|+. |.+.|-||.+||++||.|.|.+ .+
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 3577788888866433 2233344566667778888887779999999 8899999999999999997754 11
Q ss_pred -----cee-c----CCCceeeecCCCCCCCCcC-cccHHHHHHHHHHhhccCC
Q psy818 80 -----GRF-K----TNTRLCLSMSDFHPDTWNP-AWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 80 -----~~~-h----~ng~ic~~~l~~~~e~w~~-~~~vn~~l~a~~~~m~~~~ 121 (214)
.++ | .+|.+|++++ ++|++ ..++..+++.+..++.+++
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL----~~W~p~~s~L~~ll~~l~~lf~ep~ 158 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPIL----HAWDPAAMNLIMVVQELMSLLHEPP 158 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGG----GSCCGGGCCHHHHHHHHHHTTSCCC
T ss_pred cccccccCCCCCCCCCCcEeCccc----ccCCCCcCcHHHHHHHHHHHhcCCC
Confidence 133 4 4699999987 46999 6899999999999988765
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-13 Score=114.46 Aligned_cols=104 Identities=14% Similarity=0.065 Sum_probs=80.3
Q ss_pred CCCCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 97 PDTWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 97 ~e~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
.++|+.++++| .+++++++.|.++ + ++++|.++. .|+++|+|+.++++.++ .++
T Consensus 177 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la----~el 252 (328)
T 2qhx_A 177 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAA----LEL 252 (328)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHH----HHH
Confidence 67888999999 6789999999652 3 789998765 89999999999999999 777
Q ss_pred Ccc--cccccCccchhhhhccccCCchhhHhHHh---hC-CCCChHhHHHHHHHHhcCC
Q psy818 155 FPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYE---AH-PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 155 ~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~~-~~~~pedvA~~v~fl~s~p 207 (214)
.+. +||+|+||.++|++ .. . ......... .. ..++|||||++++||+|..
T Consensus 253 ~~~gIrvn~v~PG~v~T~~-~~-~-~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~ 308 (328)
T 2qhx_A 253 APLQIRVNGVGPGLSVLVD-DM-P-PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSK 308 (328)
T ss_dssp GGGTEEEEEEEESSBSCCC-CS-C-HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGG
T ss_pred hhcCcEEEEEecCcccCCc-cc-c-HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCcc
Confidence 653 99999999999998 32 1 211111111 12 3569999999999999854
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=5.5e-14 Score=114.11 Aligned_cols=112 Identities=20% Similarity=0.202 Sum_probs=83.5
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc--------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS--------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~--------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
+.+.+.++|+..+++| .+++++++.|.++ + ++++|.++. .|+++|+|+.+++++++ .++.
T Consensus 106 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la----~e~~ 181 (280)
T 1xkq_A 106 GTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTA----IDLA 181 (280)
T ss_dssp GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHH----HHHH
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCcccHHHHHHHHHHHHHHHHH----HHhc
Confidence 4556667899999999 6789999999754 4 888887653 79999999999999999 6765
Q ss_pred c--ccccccCccchhhhhccccC-Cch-------hhHhHH---hhCCCCChHhHHHHHHHHhcCC
Q psy818 156 P--DLVQSISPGLVKSQIFKSSL-GDK-------FDKSLY---EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 156 ~--~~vn~v~pg~~~t~~~~~~~-~~~-------~~~~~~---~~~~~~~pedvA~~v~fl~s~p 207 (214)
+ .+||+|+||.+.|++..... ... ...... ....+++|||||++++||+|.+
T Consensus 182 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~ 246 (280)
T 1xkq_A 182 KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRN 246 (280)
T ss_dssp TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred cCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcc
Confidence 5 39999999999999865321 000 011111 1123569999999999999854
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.8e-13 Score=111.66 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=84.8
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCCCCCCCCcCc--------------------HHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERSPTLGSIEMS--------------------DYE 133 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~v~i~S~a~~--------------------~Y~ 133 (214)
++++|+ +++..+..+.+.++|+.++++| .+++++++.|.++=+++||.++. .|+
T Consensus 88 D~lv~n-Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 166 (291)
T 3rd5_A 88 DVLINN-AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYS 166 (291)
T ss_dssp EEEEEC-CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHH
T ss_pred CEEEEC-CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHH
Confidence 345664 4444444566778999999999 67889999997644788887643 699
Q ss_pred HHHHHHHHHHhhccCcchhhhCc----ccccccCccchhhhhccccCCchhhHhHH--hhCCCC-ChHhHHHHHHHHhcC
Q psy818 134 RRQLAARSLRFNLNDKNFCELFP----DLVQSISPGLVKSQIFKSSLGDKFDKSLY--EAHPCL-QAEDIANTVEFILSS 206 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~~----~~vn~v~pg~~~t~~~~~~~~~~~~~~~~--~~~~~~-~pedvA~~v~fl~s~ 206 (214)
++|+|+.++++.++ .++.+ .+||+|+||.++|++....... ...... .....+ +|||+|++++||++.
T Consensus 167 ~sK~a~~~~~~~la----~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~ 241 (291)
T 3rd5_A 167 QSKLANLLFTSELQ----RRLTAAGSPLRALAAHPGYSHTNLQGASGRK-LGDALMSAATRVVATDADFGARQTLYAASQ 241 (291)
T ss_dssp HHHHHHHHHHHHHH----HHHHHTTCCCEEEEECCSGGGSCC---------------------CHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHH----HHHhhCCCCEEEEEeeCCCCccccccccchH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHcC
Confidence 99999999999999 55543 5899999999999987643211 111110 111123 599999999999997
Q ss_pred C
Q psy818 207 P 207 (214)
Q Consensus 207 p 207 (214)
+
T Consensus 242 ~ 242 (291)
T 3rd5_A 242 D 242 (291)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.5e-13 Score=106.24 Aligned_cols=121 Identities=17% Similarity=0.212 Sum_probs=83.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++.+++.|++.+ +++||.++. .|+++|+|+.+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 159 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLG 159 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHH
Confidence 45667554322 234556667899999999 56789999998764 788888764 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcccc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i 212 (214)
+++.++ .++.+ .+|++|+||.++|++.... .. . . .+++|||||++++|+++.+++...
T Consensus 160 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~---~-~---~~~~~~dvA~~~~~l~~~~~~~~~ 219 (234)
T 2ehd_A 160 LAGAAM----LDLREANVRVVNVLPGSVDTGFAGNT--PG---Q-A---WKLKPEDVAQAVLFALEMPGHAMV 219 (234)
T ss_dssp HHHHHH----HHHGGGTEEEEEEECC-------------------------CCHHHHHHHHHHHHHSCCSSCC
T ss_pred HHHHHH----HHHhhcCcEEEEEEeCCCcCCccccc--cc---c-c---CCCCHHHHHHHHHHHhCCCccccc
Confidence 999999 66654 3999999999999876431 00 0 1 158999999999999998876543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=1.6e-13 Score=114.04 Aligned_cols=125 Identities=18% Similarity=0.165 Sum_probs=86.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 85 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a~~~ 164 (327)
T 1jtv_A 85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEG 164 (327)
T ss_dssp SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHHHHH
Confidence 45666544221 235566778899999999 67899999997543 889998765 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCch---------hhH----hHHh-----hCC-CCChHhHHHHH
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDK---------FDK----SLYE-----AHP-CLQAEDIANTV 200 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~---------~~~----~~~~-----~~~-~~~pedvA~~v 200 (214)
+++.++ .++.+. +||+|+||.++|++........ ... .... ... ..+|||||+++
T Consensus 165 ~~~~la----~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i 240 (327)
T 1jtv_A 165 LCESLA----VLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVF 240 (327)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHH
T ss_pred HHHHHH----HHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Confidence 999999 777653 9999999999999865432110 000 0000 011 25899999999
Q ss_pred HHHhcCC
Q psy818 201 EFILSSP 207 (214)
Q Consensus 201 ~fl~s~p 207 (214)
+|+++.+
T Consensus 241 ~~l~~~~ 247 (327)
T 1jtv_A 241 LTALRAP 247 (327)
T ss_dssp HHHHHCS
T ss_pred HHHHcCC
Confidence 9999875
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=2.6e-13 Score=107.55 Aligned_cols=122 Identities=14% Similarity=0.157 Sum_probs=91.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+++ +++||.++. .|+++|+|+.+
T Consensus 88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 167 (244)
T 2bd0_A 88 DCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRG 167 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHHHHHHHH
Confidence 45667554322 234556667899999999 67889999986543 788998765 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccc
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQ 211 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~ 211 (214)
+++.++ .++.+ .+|++++||.+.|++....... . ....++|||+|++++|+++.+....
T Consensus 168 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~------~~~~~~~~dva~~~~~l~~~~~~~~ 228 (244)
T 2bd0_A 168 LVETMR----LYARKCNVRITDVQPGAVYTPMWGKVDDE-M------QALMMMPEDIAAPVVQAYLQPSRTV 228 (244)
T ss_dssp HHHHHH----HHHTTTTEEEEEEEECCBCSTTTCCCCST-T------GGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred HHHHHH----HHhhccCcEEEEEECCCccchhhhhcccc-c------cccCCCHHHHHHHHHHHHhCCcccc
Confidence 999998 66654 3999999999999986542111 1 1245899999999999999876543
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.1e-13 Score=122.18 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=85.4
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+ +++. .++.+.+.++|+.++++| .+++++++.|++++ |+++|.++. .|+++|+|+.
T Consensus 104 DiLVnn-AGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~asKaal~ 182 (613)
T 3oml_A 104 DILVNN-AGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLI 182 (613)
T ss_dssp -CEECC-CCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred cEEEEC-CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHHHHHHHHH
Confidence 445664 4443 246677888999999999 67899999998875 899998865 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++++++ .|+.+. +||+|+||.+ |++........ . ...++|||||++++||+|..
T Consensus 183 ~lt~~la----~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~-~------~~~~~pedvA~~v~~L~s~~ 239 (613)
T 3oml_A 183 GLANTVA----IEGARNNVLCNVIVPTAA-SRMTEGILPDI-L------FNELKPKLIAPVVAYLCHES 239 (613)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEEC-------CCCCCHH-H------HTTCCGGGTHHHHHHTTSTT
T ss_pred HHHHHHH----HHhCccCeEEEEEECCCC-Chhhhhccchh-h------hhcCCHHHHHHHHHHhcCCC
Confidence 9999999 777654 9999999975 55544322211 1 12369999999999999976
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.2e-13 Score=108.74 Aligned_cols=126 Identities=16% Similarity=0.212 Sum_probs=92.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+|+.+
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 160 (281)
T 3m1a_A 81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQ 160 (281)
T ss_dssp SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHH
Confidence 55777655432 245667778899999999 56899999997654 789998865 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccC------Cchhh------HhHH---hhCCCCChHhHHHHHHHHh
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL------GDKFD------KSLY---EAHPCLQAEDIANTVEFIL 204 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~------~~~~~------~~~~---~~~~~~~pedvA~~v~fl~ 204 (214)
+++.++ .++.+. +||+|+||.+.|++..... ..... .... ....+.+|+|+|++++|++
T Consensus 161 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~ 236 (281)
T 3m1a_A 161 LSEGLA----DEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLAL 236 (281)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHH
T ss_pred HHHHHH----HHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Confidence 999999 777654 9999999999998864321 00100 0111 1122579999999999999
Q ss_pred cCCC
Q psy818 205 SSPP 208 (214)
Q Consensus 205 s~p~ 208 (214)
+.+.
T Consensus 237 ~~~~ 240 (281)
T 3m1a_A 237 DTEK 240 (281)
T ss_dssp HSSS
T ss_pred hCCC
Confidence 8764
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.7e-13 Score=111.23 Aligned_cols=128 Identities=15% Similarity=0.177 Sum_probs=90.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + +++||.++. .|+++|+|+.
T Consensus 110 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 189 (301)
T 3tjr_A 110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVV 189 (301)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHH
Confidence 44566544322 345667778999999999 6789999999763 2 789998875 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCC---ch---------hhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG---DK---------FDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~---~~---------~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
+++++++ .++.+. +||+|+||.++|++...... .. ...........++|||||++++.++..
T Consensus 190 ~~~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~ 265 (301)
T 3tjr_A 190 GLAETLA----REVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILA 265 (301)
T ss_dssp HHHHHHH----HHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHH----HHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhc
Confidence 9999999 677653 99999999999988653210 00 000001111256999999999999987
Q ss_pred CCcc
Q psy818 207 PPHV 210 (214)
Q Consensus 207 p~~~ 210 (214)
++..
T Consensus 266 ~~~~ 269 (301)
T 3tjr_A 266 NRLY 269 (301)
T ss_dssp TCSE
T ss_pred CCeE
Confidence 6544
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.32 E-value=5e-13 Score=106.19 Aligned_cols=127 Identities=11% Similarity=0.148 Sum_probs=89.8
Q ss_pred CceecCCCceee-e---cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHH
Q psy818 79 NGRFKTNTRLCL-S---MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic~-~---~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a 138 (214)
++++|+.|.... + +.+.+.++|+..+++| .+++++++.|.+.+ +++||.++. .|+++|++
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 161 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA 161 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence 456665443211 1 4455667899999999 56788999987643 788888754 79999999
Q ss_pred HHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCc-hhhHhHHhhC---CCCChHhHHHHHHHHhcCCCc
Q psy818 139 ARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGD-KFDKSLYEAH---PCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~-~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~~ 209 (214)
+.++++.++ .++.+ .+|++++||.+.|++....... .......... ..++|||||++++||++.+..
T Consensus 162 ~~~~~~~l~----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 234 (250)
T 2cfc_A 162 VLQLTKSVA----VDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDAT 234 (250)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHH----HHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhh
Confidence 999999999 66654 3999999999999876431111 1111121122 245999999999999997643
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3e-13 Score=112.02 Aligned_cols=118 Identities=16% Similarity=0.135 Sum_probs=87.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 94 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~aSK~a~~~ 173 (319)
T 1gz6_A 94 DVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLG 173 (319)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHHHHHHHHHH
Confidence 55666544322 235566778899999999 56899999997653 889997653 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+. +||+|+||.+ |++....... ... ..++|||+|++++||++.+.
T Consensus 174 ~~~~la----~el~~~gI~vn~v~PG~~-t~~~~~~~~~-~~~------~~~~p~dvA~~~~~l~s~~~ 230 (319)
T 1gz6_A 174 LANTLV----IEGRKNNIHCNTIAPNAG-SRMTETVMPE-DLV------EALKPEYVAPLVLWLCHESC 230 (319)
T ss_dssp HHHHHH----HHTGGGTEEEEEEEEECC-STTTGGGSCH-HHH------HHSCGGGTHHHHHHHTSTTC
T ss_pred HHHHHH----HHhcccCEEEEEEeCCCc-cccccccCCh-hhh------ccCCHHHHHHHHHHHhCchh
Confidence 999999 666553 9999999998 7665432111 111 13799999999999998754
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.8e-13 Score=108.79 Aligned_cols=125 Identities=14% Similarity=0.185 Sum_probs=76.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++.+ +++||.++. .|+++|+++.+
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 173 (266)
T 1xq1_A 94 DILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQ 173 (266)
T ss_dssp SEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHHHH
Confidence 44666544322 235556667899999999 56888899987543 788998754 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHH---hhCCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLY---EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~---~~~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+||+|+||.+.|++.............. ....+++|||||++++||++.+
T Consensus 174 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 240 (266)
T 1xq1_A 174 LARNLA----CEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPA 240 (266)
T ss_dssp HHHHHH----HHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGG
T ss_pred HHHHHH----HHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999 66654 39999999999998765422111111111 1123569999999999999864
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=3e-13 Score=106.91 Aligned_cols=116 Identities=13% Similarity=0.021 Sum_probs=83.9
Q ss_pred CceecCCCcee-eec-CCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSM-SDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~-l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++ .+.+.++|+..+++| .+++++++.|.+.+ +++||.++. .|+++|+|+.++
T Consensus 74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 153 (236)
T 1ooe_A 74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHL 153 (236)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHH
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHH
Confidence 34566544221 223 455567899999999 56889999997655 889998765 799999999999
Q ss_pred HhhccCcchhhhC--c--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHh
Q psy818 143 RFNLNDKNFCELF--P--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFIL 204 (214)
Q Consensus 143 ~~~l~~~~~~e~~--~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~ 204 (214)
++.++ .++. + .+||+|+||.++|++......... ......|||||+++++++
T Consensus 154 ~~~la----~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~------~~~~~~~~dvA~~i~~~l 209 (236)
T 1ooe_A 154 TSSLA----AKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNAD------HSSWTPLSFISEHLLKWT 209 (236)
T ss_dssp HHHHH----STTSSCCTTCEEEEEEESCBCCHHHHHHSTTCC------GGGCBCHHHHHHHHHHHH
T ss_pred HHHHH----HHhcccCCCeEEEEEecCcccCcchhhcCCCcc------ccccCCHHHHHHHHHHHH
Confidence 99999 5654 4 499999999999998653211110 112468999999998555
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.6e-12 Score=103.85 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=86.6
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-----C--CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-----S--PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-----~--v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+.|. .+.++|+..+++| .+++++++.|.++ + +++||.++. .|+++|+|+
T Consensus 86 d~lv~~Ag~-------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 158 (254)
T 1sby_A 86 DILINGAGI-------LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAV 158 (254)
T ss_dssp CEEEECCCC-------CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHH
T ss_pred CEEEECCcc-------CCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHH
Confidence 456665443 1357899999999 6789999999654 3 789998765 799999999
Q ss_pred HHHHhhccCcchhhhC--cccccccCccchhhhhccccCC----chhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 140 RSLRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLG----DKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~----~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
.++++.++ .++. +.+||+|+||.++|++...... ...........+..+|||+|++++|+++.
T Consensus 159 ~~~~~~la----~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~~ 227 (254)
T 1sby_A 159 VSFTNSLA----KLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA 227 (254)
T ss_dssp HHHHHHHH----HHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----HHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHHc
Confidence 99999998 5554 3499999999999998653211 11122222334556999999999999974
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-12 Score=102.93 Aligned_cols=124 Identities=15% Similarity=0.229 Sum_probs=79.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|... .++.+.+.++|+..+++| .+++++++.|.+++ +++||.++. .|+++|+++.+
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 164 (247)
T 2hq1_A 85 DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIG 164 (247)
T ss_dssp CEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHHH
Confidence 55677554322 235566778999999998 56888999887643 788888653 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+. +||+++||.+.|++.... ........... ...++|||||++++||++.+
T Consensus 165 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 230 (247)
T 2hq1_A 165 FTKSIA----KEFAAKGIYCNAVAPGIIKTDMTDVL-PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDD 230 (247)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHTS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHHHHcCcEEEEEEEEEEeccchhhc-chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999999 666543 999999999999876532 12111111111 23569999999999999865
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.3e-12 Score=105.69 Aligned_cols=130 Identities=24% Similarity=0.310 Sum_probs=91.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C--CCCCCCcCc---------HHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S--PTLGSIEMS---------DYERRQL 137 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~--v~i~S~a~~---------~Y~a~K~ 137 (214)
++++|+.|... .++.+.+.++|+..+++| .+++.+++.|++. + ++++|.++. .|+++|+
T Consensus 113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~ 192 (279)
T 1xg5_A 113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKY 192 (279)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHHHH
Confidence 45666544322 235556667899999999 4578899999753 3 678887653 6999999
Q ss_pred HHHHHHhhccCcchhhhC----cccccccCccchhhhhccccCCc--hhhHhHHhhCCCCChHhHHHHHHHHhcCCCccc
Q psy818 138 AARSLRFNLNDKNFCELF----PDLVQSISPGLVKSQIFKSSLGD--KFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQ 211 (214)
Q Consensus 138 a~~~~~~~l~~~~~~e~~----~~~vn~v~pg~~~t~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~ 211 (214)
|+.++++.++ .++. ..+||+|+||.+.|++....... ............++|+|||++++||++.+.+++
T Consensus 193 a~~~~~~~la----~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~ 268 (279)
T 1xg5_A 193 AVTALTEGLR----QELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQ 268 (279)
T ss_dssp HHHHHHHHHH----HHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTEE
T ss_pred HHHHHHHHHH----HHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCCcceE
Confidence 9999999999 5554 34999999999999875322211 111111122336799999999999999988765
Q ss_pred c
Q psy818 212 V 212 (214)
Q Consensus 212 i 212 (214)
+
T Consensus 269 ~ 269 (279)
T 1xg5_A 269 I 269 (279)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-12 Score=103.99 Aligned_cols=125 Identities=19% Similarity=0.203 Sum_probs=88.6
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|.......+.+.++|+..+++| .+++++++.|.+.+ +++||.++. .|+++|+++.++
T Consensus 90 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 169 (255)
T 1fmc_A 90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL 169 (255)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHH
Confidence 45667544322211245567889999999 56888999887643 788888754 799999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
++.++ .++.+ .+||+++||.+.|++................. ..++|+|||++++||++.+
T Consensus 170 ~~~~~----~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 235 (255)
T 1fmc_A 170 VRNMA----FDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA 235 (255)
T ss_dssp HHHHH----HHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHH----HHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCc
Confidence 99998 66643 39999999999998765432222222222222 2569999999999999864
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=4e-12 Score=102.23 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=79.2
Q ss_pred CCCCcCcccHH-----HHHHHHHHhhccC-----C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc-
Q psy818 97 PDTWNPAWSVS-----TILTGLLSFMVER-----S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP- 156 (214)
Q Consensus 97 ~e~w~~~~~vn-----~~l~a~~~~m~~~-----~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~- 156 (214)
.++|+..+++| .+++.+++.|.+. + +++||.++. .|+++|+|+.+++++++.. .++.+
T Consensus 99 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~ala--~e~~~~ 176 (267)
T 2gdz_A 99 EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA--ANLMNS 176 (267)
T ss_dssp SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH--HHHHTC
T ss_pred hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHHHHHHH--HHhccC
Confidence 47899999999 4688999999753 3 789998765 7999999999999985311 45544
Q ss_pred -ccccccCccchhhhhccccCCchhh-------Hh---HHhhCCCCChHhHHHHHHHHhcCC
Q psy818 157 -DLVQSISPGLVKSQIFKSSLGDKFD-------KS---LYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 157 -~~vn~v~pg~~~t~~~~~~~~~~~~-------~~---~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
.+||+|+||.++|++.......... .. .......++|||||++++||++.+
T Consensus 177 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~ 238 (267)
T 2gdz_A 177 GVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD 238 (267)
T ss_dssp CEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT
T ss_pred CcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCc
Confidence 3999999999999976432211100 00 111123579999999999999965
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-12 Score=103.06 Aligned_cols=125 Identities=15% Similarity=0.192 Sum_probs=90.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++|+.|... .++.+.+.++|+..+++| .+++++.+.|.++ + +++||.++. .|+++|+|+.
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 157 (244)
T 3d3w_A 78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALD 157 (244)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHH
Confidence 55677554322 235556667899999999 5688888988653 2 788998764 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
++++.++ .++.+ .+|++|+||.+.|++.......... ...... ....+|||+|++++||++.+
T Consensus 158 ~~~~~la----~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 3d3w_A 158 MLTKVMA----LELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226 (244)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHH----HHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9999999 67654 3999999999999876532221111 222122 23569999999999999864
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-12 Score=103.17 Aligned_cols=124 Identities=15% Similarity=0.220 Sum_probs=88.4
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+.++|+.|... .++.+.+.++|+..+++| .+++++.+.|.+++ +++||.++. .|+++|+++.+
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 160 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 160 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHH
Confidence 55667544222 234455667899999999 56889999987543 788998653 89999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+||+++||.+.|++.... ........... ...++|||||++++||++.+
T Consensus 161 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1edo_A 161 FSKTAA----REGASRNINVNVVCPGFIASDMTAKL-GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSP 226 (244)
T ss_dssp HHHHHH----HHHHTTTEEEEEEEECSBCSHHHHTT-CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCS
T ss_pred HHHHHH----HHhhhcCCEEEEEeeCccccchhhhc-ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999999 66644 3999999999999986542 11111111111 22569999999999999554
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.8e-12 Score=103.57 Aligned_cols=125 Identities=13% Similarity=0.211 Sum_probs=89.0
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a 138 (214)
++++|+.|... .++.+.+.++|...+++| .+++++.+.|.+++ ++++|.++. .|+++|++
T Consensus 92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a 171 (260)
T 3awd_A 92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAG 171 (260)
T ss_dssp CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHHH
Confidence 55677544321 235566667899999999 56788899887643 788887643 79999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhcc-ccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFK-SSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~-~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+.++++.++ .++.+. +|++|+||.+.|++.. .............. ..+++|||||++++||++.+
T Consensus 172 ~~~~~~~l~----~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 242 (260)
T 3awd_A 172 VHQYIRSLA----AEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDA 242 (260)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHH----HHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCch
Confidence 999999999 666553 9999999999998765 21111111222222 23569999999999999864
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.25 E-value=2.1e-12 Score=102.64 Aligned_cols=125 Identities=16% Similarity=0.132 Sum_probs=88.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++.+++.|.+.+ +++||.++. .|+++|+++.
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 163 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVR 163 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHH
Confidence 45667544322 235566667899999999 46889999997653 678888754 8999999999
Q ss_pred HHHhhccCcchhhhC----cccccccCccchhhhhccccCCchhhHhHHh---hCCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELF----PDLVQSISPGLVKSQIFKSSLGDKFDKSLYE---AHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~----~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p 207 (214)
++++.++ .++. +.+|++|+||.+.|++............... ...+++|||||++++||++.+
T Consensus 164 ~~~~~~a----~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 233 (251)
T 1zk4_A 164 IMSKSAA----LDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE 233 (251)
T ss_dssp HHHHHHH----HHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHH----HHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9999998 5543 3499999999999998754211111111111 122569999999999999865
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-12 Score=105.73 Aligned_cols=125 Identities=17% Similarity=0.207 Sum_probs=86.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+.+ +++||.++. .|+++|+|+.+
T Consensus 123 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 202 (285)
T 2c07_A 123 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIG 202 (285)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHHH
Confidence 44556444322 234556667899999999 56889999987543 788998753 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++.++ .++.+ .+||+|+||.+.|++.... ........... ....+|||||++++||++.+.
T Consensus 203 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~ 269 (285)
T 2c07_A 203 FTKSLA----KELASRNITVNAIAPGFISSDMTDKI-SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS 269 (285)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCC-----C-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHHHHhCcEEEEEEeCcEecCchhhc-CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCc
Confidence 999999 66654 3999999999999876532 11111111111 225699999999999998653
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.3e-12 Score=102.83 Aligned_cols=107 Identities=13% Similarity=0.188 Sum_probs=71.9
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-----------------------------------HHH
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-----------------------------------DYE 133 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-----------------------------------~Y~ 133 (214)
+.|+..+++| .+++++++.|.+++ +++||.++. .|+
T Consensus 77 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 156 (257)
T 1fjh_A 77 KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156 (257)
T ss_dssp SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHH
T ss_pred ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHH
Confidence 4599999999 67899999997763 788887542 699
Q ss_pred HHHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHh-----hCCCCChHhHHHHHHHHhcC
Q psy818 134 RRQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYE-----AHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~-----~~~~~~pedvA~~v~fl~s~ 206 (214)
++|+|+.++++.++ .++.+ .+||+|+||.+.|++............... ...+++|||+|++++||++.
T Consensus 157 ~sK~a~~~~~~~la----~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 232 (257)
T 1fjh_A 157 GSKNALTVAVRKRA----AAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSP 232 (257)
T ss_dssp HHHHHHHHHHHHTH----HHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHH----HHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999 66654 499999999999998654311111111111 12357999999999999986
Q ss_pred CC
Q psy818 207 PP 208 (214)
Q Consensus 207 p~ 208 (214)
+.
T Consensus 233 ~~ 234 (257)
T 1fjh_A 233 AA 234 (257)
T ss_dssp GG
T ss_pred hh
Confidence 53
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.3e-12 Score=103.08 Aligned_cols=125 Identities=16% Similarity=0.201 Sum_probs=88.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + +++||.++. .|+++|+|+.
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 166 (261)
T 1gee_A 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMK 166 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHHH
Confidence 55667544322 234556667899999999 5688899998763 3 788998764 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccC-CchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSL-GDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~-~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
++++.++ .++.+ .+|++++||.+.|++..... ........... ..+.+|||||++++||++.+
T Consensus 167 ~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 235 (261)
T 1gee_A 167 LMTETLA----LEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE 235 (261)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHH----HHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9999999 66654 38999999999998764321 11111111111 22569999999999999854
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.6e-12 Score=106.56 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=85.8
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+.++++| .++++++|.|++++ ++++|.++. .|+++|+|+.
T Consensus 89 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~ 168 (324)
T 3u9l_A 89 DVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMD 168 (324)
T ss_dssp SEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHHHHHHH
Confidence 45666544322 246677788999999999 67899999998654 788888754 6999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhcccc--C-Cc-hhh-H---------------hHHh--hCCCCChHhH
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSS--L-GD-KFD-K---------------SLYE--AHPCLQAEDI 196 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~--~-~~-~~~-~---------------~~~~--~~~~~~pedv 196 (214)
+++++++ .|+.+ .+||+|+||.+.|++.... . .. ... . .... ..+..+|+||
T Consensus 169 ~~~~~la----~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~v 244 (324)
T 3u9l_A 169 AIAVQYA----RELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLV 244 (324)
T ss_dssp HHHHHHH----HHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHH
T ss_pred HHHHHHH----HHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHH
Confidence 9999999 77765 3999999999987643211 0 10 000 0 0000 1123589999
Q ss_pred HHHHHHHhcCCC
Q psy818 197 ANTVEFILSSPP 208 (214)
Q Consensus 197 A~~v~fl~s~p~ 208 (214)
|+++++++..|.
T Consensus 245 A~aiv~~~~~~~ 256 (324)
T 3u9l_A 245 ADAIVRVVGTAS 256 (324)
T ss_dssp HHHHHHHHTSCT
T ss_pred HHHHHHHhcCCC
Confidence 999999998874
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.5e-12 Score=106.42 Aligned_cols=128 Identities=22% Similarity=0.178 Sum_probs=85.9
Q ss_pred ceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHHHHH
Q psy818 80 GRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYERRQ 136 (214)
Q Consensus 80 ~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~a~K 136 (214)
+++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.++ + +++||.++. .|+++|
T Consensus 90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~aSK 169 (319)
T 3ioy_A 90 ILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTK 169 (319)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHHHHH
Confidence 356644422 2245666778899999999 6789999999753 3 889999876 799999
Q ss_pred HHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCch-hh------------HhHHhhC-CCCChHhHHHHH
Q psy818 137 LAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDK-FD------------KSLYEAH-PCLQAEDIANTV 200 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~-~~------------~~~~~~~-~~~~pedvA~~v 200 (214)
+|+.+++++++ .++.+ .+|++|+||.+.|++........ .. ....... ..++|||+|+.+
T Consensus 170 aal~~~~~~la----~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~ 245 (319)
T 3ioy_A 170 FAVRGLSESLH----YSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARV 245 (319)
T ss_dssp HHHHHHHHHHH----HHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHHH
T ss_pred HHHHHHHHHHH----HHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 99999999999 66655 39999999999999875321110 00 0000000 126999999999
Q ss_pred HHHhcCCCccc
Q psy818 201 EFILSSPPHVQ 211 (214)
Q Consensus 201 ~fl~s~p~~~~ 211 (214)
+.++..++...
T Consensus 246 ~~al~~~~~~i 256 (319)
T 3ioy_A 246 IEAMKANRLHI 256 (319)
T ss_dssp HHHHHTTCSEE
T ss_pred HHHHHcCCCEE
Confidence 99998876443
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.3e-12 Score=103.17 Aligned_cols=108 Identities=17% Similarity=0.212 Sum_probs=77.9
Q ss_pred CCCCCCcCcccHH-----HHHHHHHHhhccC------C----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchh
Q psy818 95 FHPDTWNPAWSVS-----TILTGLLSFMVER------S----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 95 ~~~e~w~~~~~vn-----~~l~a~~~~m~~~------~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
.+.++|+..+++| .+++++.+.|.++ + ++++|.++. .|+++|+|+.++++.++ .
T Consensus 111 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la----~ 186 (265)
T 2o23_A 111 HTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA----R 186 (265)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHH----H
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCchhHHHHHHHHHHHHHHH----H
Confidence 4556799999999 6788999999765 3 788888754 79999999999999999 6
Q ss_pred hhCcc--cccccCccchhhhhccccCCchhhHhHHh---h-CCCCChHhHHHHHHHHhcCC
Q psy818 153 ELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYE---A-HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 153 e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~-~~~~~pedvA~~v~fl~s~p 207 (214)
++.+. +||+|+||.+.|++..... ......... . ...++|||||++++||++.+
T Consensus 187 e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 246 (265)
T 2o23_A 187 DLAPIGIRVMTIAPGLFGTPLLTSLP-EKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENP 246 (265)
T ss_dssp HHGGGTEEEEEEEECCBCCC-----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHCT
T ss_pred HHhhcCcEEEEEEeccccCccccccC-HHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhcC
Confidence 66553 9999999999998765321 111111111 1 23569999999999999753
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=6.1e-12 Score=101.41 Aligned_cols=125 Identities=20% Similarity=0.217 Sum_probs=89.4
Q ss_pred CceecCCCcee---eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHH
Q psy818 79 NGRFKTNTRLC---LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic---~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a 138 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+++ ++++|.++. .|+++|++
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a 173 (278)
T 2bgk_A 94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHA 173 (278)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHH
T ss_pred CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHH
Confidence 44666544221 234556667899999999 67889999997643 788887643 69999999
Q ss_pred HHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCC--chhhHhHHhh-----CCCCChHhHHHHHHHHhcCC
Q psy818 139 ARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG--DKFDKSLYEA-----HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~--~~~~~~~~~~-----~~~~~pedvA~~v~fl~s~p 207 (214)
+.++++.++ .++.+ .+|++|+||.+.|++...... .......... ..+++|||||++++||++.+
T Consensus 174 ~~~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 247 (278)
T 2bgk_A 174 VLGLTTSLC----TELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE 247 (278)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHH----HHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcc
Confidence 999999999 66654 399999999999998654322 1111111111 23579999999999999864
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=3.6e-12 Score=102.93 Aligned_cols=120 Identities=15% Similarity=0.156 Sum_probs=89.0
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+++ +++||.++. .|+++|+|+.+
T Consensus 110 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 189 (272)
T 1yb1_A 110 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVG 189 (272)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHH
T ss_pred cEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHHH
Confidence 44566544221 224445557889999999 56889999997654 789998865 79999999999
Q ss_pred HHhhccCcchhhhC-----cccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCcc
Q psy818 142 LRFNLNDKNFCELF-----PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHV 210 (214)
Q Consensus 142 ~~~~l~~~~~~e~~-----~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~ 210 (214)
+++.++ .++. +.+|++|+||.++|++... . .......++|||+|+++++++..+...
T Consensus 190 l~~~la----~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----~----~~~~~~~~~~~dva~~i~~~~~~~~~~ 251 (272)
T 1yb1_A 190 FHKTLT----DELAALQITGVKTTCLCPNFVNTGFIKN----P----STSLGPTLEPEEVVNRLMHGILTEQKM 251 (272)
T ss_dssp HHHHHH----HHHHHTTCTTEEEEEEEETHHHHCSTTC----T----HHHHCCCCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHH----HHHHHhCCCCeEEEEEeCCcccCCcccc----c----cccccCCCCHHHHHHHHHHHHHcCCCE
Confidence 999999 6653 3499999999999997532 1 112234689999999999999987653
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.9e-12 Score=103.57 Aligned_cols=109 Identities=18% Similarity=0.216 Sum_probs=81.2
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
+.+.++|+..+++| .+++.+++.|.+.+ +++||.++. .|+++|+++.++++.++ .++.
T Consensus 131 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la----~e~~ 206 (279)
T 3ctm_A 131 VDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLA----IEWA 206 (279)
T ss_dssp SSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHHHH----HHTT
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHHHH----HHhc
Confidence 44556788899999 45789999997643 788887643 79999999999999999 6665
Q ss_pred cc-cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 156 PD-LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 156 ~~-~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+. +||+|+||.++|++.... ........... ...++|||||++++||++.+
T Consensus 207 ~~~~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 261 (279)
T 3ctm_A 207 PFARVNTISPGYIDTDITDFA-SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNA 261 (279)
T ss_dssp TTCEEEEEEECSBSSTTTSSC-CHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGG
T ss_pred ccCCEEEEeccCCcccccccc-ChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCcc
Confidence 44 999999999999987421 12211222222 23569999999999999865
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=4.1e-12 Score=101.10 Aligned_cols=125 Identities=18% Similarity=0.203 Sum_probs=89.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------~Y~a~K~a~ 139 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|++++ +++||.++. .|+++|+++
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~ 166 (254)
T 2wsb_A 87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAV 166 (254)
T ss_dssp CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHH
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHH
Confidence 55667554322 235556667899999999 56888999987643 788887643 799999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCC-chhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG-DKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~-~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
.++++.++ .++.+ .+|++|+||.+.|++...... .......... ...++|||+|++++||++.+
T Consensus 167 ~~~~~~~~----~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 236 (254)
T 2wsb_A 167 HQLTRALA----AEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPA 236 (254)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHH----HHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence 99999999 66654 389999999999987643211 1111122122 23569999999999999864
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.1e-12 Score=100.53 Aligned_cols=124 Identities=10% Similarity=0.203 Sum_probs=89.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+.+ +++||.++. .|+++|+++.+
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T 2ph3_A 82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIG 161 (245)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHHH
Confidence 55677544322 234556667899999999 56889999997643 788998643 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+|++++||.+.|++.... ........... ..+++|+|+|++++|+++.+
T Consensus 162 ~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 227 (245)
T 2ph3_A 162 FTRAVA----KEYAQRGITVNAVAPGFIETEMTERL-PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEK 227 (245)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHTS-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHH----HHHHHcCeEEEEEEEEeecCcchhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999 66654 3999999999999886542 11111111111 23569999999999999865
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.1e-12 Score=101.68 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=86.7
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++.+.|.++ + +++||.++. .|+++|+|+.
T Consensus 94 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 173 (264)
T 2pd6_A 94 SVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVI 173 (264)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHHHHHHHHHH
T ss_pred eEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhhHHHHHHHH
Confidence 55677544322 234556667899999999 6788999988752 3 788998643 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHh---hCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYE---AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .++.+ .+|++++||.+.|++..... ......... ....++|||||++++||++.+.
T Consensus 174 ~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 241 (264)
T 2pd6_A 174 GLTQTAA----RELGRHGIRCNSVLPGFIATPMTQKVP-QKVVDKITEMIPMGHLGDPEDVADVVAFLASEDS 241 (264)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCSCC-----------CTGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhhhcCeEEEEEeeecccccchhhcC-HHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcc
Confidence 9999999 66654 39999999999998764321 111111111 1235699999999999998643
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=5.9e-12 Score=100.72 Aligned_cols=124 Identities=15% Similarity=0.197 Sum_probs=87.8
Q ss_pred ceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc--------------HHHH
Q psy818 80 GRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS--------------DYER 134 (214)
Q Consensus 80 ~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~--------------~Y~a 134 (214)
+++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + +++||.++. .|++
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~ 174 (265)
T 1h5q_A 95 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNS 174 (265)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHH
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccHH
Confidence 3566544221 234555667899999999 6788889988653 3 788887542 6999
Q ss_pred HHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 135 RQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 135 ~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+|+.++++.++ .++.+ .+|++|+||.+.|++.... ........... ..+.+|||||++++||++.+.
T Consensus 175 sK~a~~~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 248 (265)
T 1h5q_A 175 SKAACSNLVKGLA----AEWASAGIRVNALSPGYVNTDQTAHM-DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHA 248 (265)
T ss_dssp HHHHHHHHHHHHH----HHHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHH----HHHHhcCcEEEEEecCcccccccccc-chhHHHHHHhcCcccCCCCHHHHHHHHHhhccCch
Confidence 9999999999999 66654 3999999999999987542 11111111111 235699999999999998653
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-11 Score=101.03 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=81.5
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcC-----------------------------------
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEM----------------------------------- 129 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~----------------------------------- 129 (214)
+.+.+.|+..+++| .+++++++.|++++ +++||.++
T Consensus 139 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (311)
T 3o26_A 139 SETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKD 218 (311)
T ss_dssp ECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred ccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhh
Confidence 44556788889999 67899999997654 78999865
Q ss_pred ---------------cHHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHHhhCCCCChH
Q psy818 130 ---------------SDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAE 194 (214)
Q Consensus 130 ---------------~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pe 194 (214)
..|+++|+|+.++++.++ .++.+.+||+|+||.++|++.... ...+||
T Consensus 219 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la----~e~~~i~v~~v~PG~v~T~~~~~~-------------~~~~~~ 281 (311)
T 3o26_A 219 FKENLIETNGWPSFGAAYTTSKACLNAYTRVLA----NKIPKFQVNCVCPGLVKTEMNYGI-------------GNYTAE 281 (311)
T ss_dssp HHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHH----HHCTTSEEEEECCCSBCSGGGTTC-------------CSBCHH
T ss_pred hhccccccccCcccchhhHHHHHHHHHHHHHHH----hhcCCceEEEecCCceecCCcCCC-------------CCCCHH
Confidence 269999999999999999 777778999999999999986431 236899
Q ss_pred hHHHHHHHHhcCCCc
Q psy818 195 DIANTVEFILSSPPH 209 (214)
Q Consensus 195 dvA~~v~fl~s~p~~ 209 (214)
+.|+.+++++..|..
T Consensus 282 ~~a~~~~~~~~~~~~ 296 (311)
T 3o26_A 282 EGAEHVVRIALFPDD 296 (311)
T ss_dssp HHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHHhCCCC
Confidence 999999999987753
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=8.1e-12 Score=98.81 Aligned_cols=126 Identities=20% Similarity=0.246 Sum_probs=90.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
+.++|+.|... .++.+.+.++|+..+++| .+++++.+.|.++ + +++||.++. .|+++|+++.
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 157 (244)
T 1cyd_A 78 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMT 157 (244)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence 55677654322 235556667899999999 5688888988653 3 788888754 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhh-HhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFD-KSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
.+++.++ .++.+ .+|++++||.+.|++.......... ...... ..++.|||+|++++||++.+.
T Consensus 158 ~~~~~~a----~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 227 (244)
T 1cyd_A 158 MLTKAMA----MELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRS 227 (244)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchh
Confidence 9999998 66654 3999999999999876432222111 222222 235799999999999998653
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=6.1e-12 Score=99.66 Aligned_cols=124 Identities=17% Similarity=0.226 Sum_probs=88.1
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+++ +++||.++. .|+++|+++.+
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 166 (248)
T 2pnf_A 87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIG 166 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHHHH
Confidence 45677544322 234455667899999999 55688888887643 788887643 79999999999
Q ss_pred HHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++.++ .++.+ .+|++++||.+.|++.... ........... ....+|+|||++++||++.+
T Consensus 167 ~~~~la----~e~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 232 (248)
T 2pnf_A 167 FTKSLA----KELAPRNVLVNAVAPGFIETDMTAVL-SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSEL 232 (248)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHhcccCeEEEEEEeceecCchhhhc-cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCch
Confidence 999999 66654 3999999999999876532 21111111111 23569999999999999864
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2.1e-11 Score=99.48 Aligned_cols=125 Identities=14% Similarity=0.140 Sum_probs=84.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhc-cC--C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMV-ER--S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~-~~--~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|. .. + +++||.++. .|+++|+|+.
T Consensus 106 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 185 (302)
T 1w6u_A 106 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVE 185 (302)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHHHH
Confidence 45666544321 234455667899999998 56788899886 22 2 788988654 7999999999
Q ss_pred HHHhhccCcchhhhCc--ccccccCccchhhh-hccccCCchhh-HhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFP--DLVQSISPGLVKSQ-IFKSSLGDKFD-KSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~-~~~~~~~~~~~-~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
++++.++ .++.+ .+|++++||.+.|+ +.......... ....... ..++|||||++++||++.+
T Consensus 186 ~~~~~la----~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~ 255 (302)
T 1w6u_A 186 AMSKSLA----AEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDY 255 (302)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHH----HHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCc
Confidence 9999999 66654 38999999999887 43322111111 1121222 2569999999999999864
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.10 E-value=4.2e-11 Score=94.37 Aligned_cols=123 Identities=17% Similarity=0.104 Sum_probs=85.7
Q ss_pred CceecCCCcee-eecCCCCCC----CCcCcccHH-----HHHHHHHHhhccC---------C-CCCCCCcCc-------H
Q psy818 79 NGRFKTNTRLC-LSMSDFHPD----TWNPAWSVS-----TILTGLLSFMVER---------S-PTLGSIEMS-------D 131 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e----~w~~~~~vn-----~~l~a~~~~m~~~---------~-v~i~S~a~~-------~ 131 (214)
+.++|+.|... ..+.+.+.+ +|+..+++| .+++++.+.|.++ . ++++|.++. .
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 147 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 147 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence 33566544221 223343434 788889988 6788899988753 2 678888654 7
Q ss_pred HHHHHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh----CCCCChHhHHHHHHHHhc
Q psy818 132 YERRQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA----HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 132 Y~a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~pedvA~~v~fl~s 205 (214)
|+++|+++.++++.++ .++.+ .+|++|+||.+.|++..... .......... ..+.+|||+|++++||++
T Consensus 148 Y~~sK~a~~~~~~~l~----~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 222 (242)
T 1uay_A 148 YAASKGGVVALTLPAA----RELAGWGIRVVTVAPGLFDTPLLQGLP-EKAKASLAAQVPFPPRLGRPEEYAALVLHILE 222 (242)
T ss_dssp HHHHHHHHHHHHHHHH----HHHGGGTEEEEEEEECSCSSHHHHTSC-HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH----HHHhhcCcEEEEEEeccCcchhhhccc-hhHHHHHHhhCCCcccCCCHHHHHHHHHHHhc
Confidence 9999999999999999 66654 39999999999999865421 2111111111 224699999999999998
Q ss_pred C
Q psy818 206 S 206 (214)
Q Consensus 206 ~ 206 (214)
.
T Consensus 223 ~ 223 (242)
T 1uay_A 223 N 223 (242)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.10 E-value=3.1e-11 Score=98.64 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=84.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhcc-CC---CCCCCCcCc------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVE-RS---PTLGSIEMS------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~-~~---v~i~S~a~~------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.+ .+ ++++|.+.. .|+++|+|+.++
T Consensus 102 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~Y~~sK~a~~~~ 181 (303)
T 1yxm_A 102 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNL 181 (303)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCCcchhhHHHHHHHHHH
Confidence 45667555222 234555667899999999 678888885433 22 778887621 799999999999
Q ss_pred HhhccCcchhhhCc--ccccccCccchhhhhccccCC---chhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLG---DKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~---~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
++.++ .++.+ .+||+|+||.+.|++...... .......... ..+++|||||++++||++.+
T Consensus 182 ~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~ 250 (303)
T 1yxm_A 182 TKSLA----LEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA 250 (303)
T ss_dssp HHHHH----HHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGG
T ss_pred HHHHH----HHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcc
Confidence 99999 66654 399999999999985321111 1111111111 23569999999999999864
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.10 E-value=1.5e-11 Score=99.82 Aligned_cols=121 Identities=9% Similarity=0.025 Sum_probs=87.6
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C--CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S--PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~--v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.+++. ..+.+.+.++|+..+++| .+++++++.|.+. + +++||.++. .|+++|+|+.++
T Consensus 108 D~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 187 (286)
T 1xu9_A 108 DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 187 (286)
T ss_dssp SEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHHHHHHH
Confidence 44666533332 234445567888999999 6688899988653 3 888998765 799999999999
Q ss_pred HhhccCcchhhh----CcccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 143 RFNLNDKNFCEL----FPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 143 ~~~l~~~~~~e~----~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+++++ .++ ...+|++|+||.++|++........ .....++|||+|+.++..+..+..
T Consensus 188 ~~~l~----~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~~~~~vA~~i~~~~~~~~~ 248 (286)
T 1xu9_A 188 FSSIR----KEYSVSRVNVSITLCVLGLIDTETAMKAVSGI------VHMQAAPKEECALEIIKGGALRQE 248 (286)
T ss_dssp HHHHH----HHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG------GGGGCBCHHHHHHHHHHHHHTTCS
T ss_pred HHHHH----HHHhhcCCCeEEEEeecCccCChhHHHhcccc------ccCCCCCHHHHHHHHHHHHhcCCc
Confidence 99999 555 2348999999999999864321110 112357999999999999876543
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.09 E-value=2.7e-11 Score=97.37 Aligned_cols=125 Identities=14% Similarity=0.145 Sum_probs=86.3
Q ss_pred ceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHHH
Q psy818 80 GRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSLR 143 (214)
Q Consensus 80 ~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~~ 143 (214)
+++|+.|... .++.+.+.++|+..+++| .+++++++.|++.+ +++||.++. .|+++|+++.+++
T Consensus 102 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~ 181 (274)
T 1ja9_A 102 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFC 181 (274)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCchHHHHHHHHHHHH
Confidence 3555443221 234455667899999998 66888889887434 788887543 7999999999999
Q ss_pred hhccCcchhhhCc--ccccccCccchhhhhccc-----------cCC-chhhHhHHhh---CCCCChHhHHHHHHHHhcC
Q psy818 144 FNLNDKNFCELFP--DLVQSISPGLVKSQIFKS-----------SLG-DKFDKSLYEA---HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 144 ~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~-----------~~~-~~~~~~~~~~---~~~~~pedvA~~v~fl~s~ 206 (214)
+.++ .++.+ .+|++++||.+.|++... ... .......... ...+.|||||++++||++.
T Consensus 182 ~~~~----~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~ 257 (274)
T 1ja9_A 182 RAFA----VDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQE 257 (274)
T ss_dssp HHHH----HHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHH----HHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence 9999 66654 389999999999987652 111 1111111111 2356999999999999986
Q ss_pred CC
Q psy818 207 PP 208 (214)
Q Consensus 207 p~ 208 (214)
+.
T Consensus 258 ~~ 259 (274)
T 1ja9_A 258 ES 259 (274)
T ss_dssp GG
T ss_pred cc
Confidence 53
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=8.4e-12 Score=106.62 Aligned_cols=111 Identities=11% Similarity=-0.081 Sum_probs=80.5
Q ss_pred cCCCCCCCCcCcccHH------HHHHHHHH-hhccCC---CCCCCCcCc---------HHHHHHHHHHHHHhhccCcchh
Q psy818 92 MSDFHPDTWNPAWSVS------TILTGLLS-FMVERS---PTLGSIEMS---------DYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn------~~l~a~~~-~m~~~~---v~i~S~a~~---------~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
+.+.+.++|+.++++| .+++++.+ .|..++ ++++|+++. .|+++|+|+.+++++|+ .
T Consensus 201 ~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA----~ 276 (418)
T 4eue_A 201 VSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLIN----E 276 (418)
T ss_dssp ECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHH----H
T ss_pred ccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHH----H
Confidence 3456678899999888 23455544 344433 788888754 68999999999999999 8
Q ss_pred hhCc---ccccccCccchhhhhccccCCchhh-HhHH-hhCCCCChHhHHHHHHHHhcC
Q psy818 153 ELFP---DLVQSISPGLVKSQIFKSSLGDKFD-KSLY-EAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 153 e~~~---~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~-~~~~~~~pedvA~~v~fl~s~ 206 (214)
|+++ .|||+|+||.+.|++.......... .... .....++|||+++++.||+|.
T Consensus 277 ELa~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd 335 (418)
T 4eue_A 277 KLNRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSE 335 (418)
T ss_dssp HHHHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HhCCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhc
Confidence 8887 4999999999999987654322211 1111 112357999999999999985
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.09 E-value=2.4e-11 Score=96.12 Aligned_cols=113 Identities=15% Similarity=0.100 Sum_probs=77.3
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-------------C--CCCCCCcC-------
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-------------S--PTLGSIEM------- 129 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-------------~--v~i~S~a~------- 129 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + ++++|.++
T Consensus 83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~ 162 (250)
T 1yo6_A 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS 162 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS
T ss_pred cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc
Confidence 45667544322 234555667899999999 5678888888643 3 77888653
Q ss_pred ----c---HHHHHHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHH
Q psy818 130 ----S---DYERRQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTV 200 (214)
Q Consensus 130 ----~---~Y~a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v 200 (214)
. .|+++|+|+.++++.++ .++.+ .+|++|+||.++|++... ..+++|||+|+.+
T Consensus 163 ~~~~~~~~~Y~~sK~a~~~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~~~~~~a~~~ 225 (250)
T 1yo6_A 163 GSAQFPVLAYRMSKAAINMFGRTLA----VDLKDDNVLVVNFCPGWVQTNLGGK-------------NAALTVEQSTAEL 225 (250)
T ss_dssp TTSSSCBHHHHHHHHHHHHHHHHHH----HHTGGGTCEEEEEECCCC--------------------------HHHHHHH
T ss_pred ccccCCccHHHHHHHHHHHHHHHHH----HHhccCCeEEEEEcCCceecCCCCC-------------CCCCCHHHHHHHH
Confidence 1 79999999999999999 66654 399999999999987532 1247999999999
Q ss_pred HHHhcCCC
Q psy818 201 EFILSSPP 208 (214)
Q Consensus 201 ~fl~s~p~ 208 (214)
+++++.+.
T Consensus 226 ~~~~~~~~ 233 (250)
T 1yo6_A 226 ISSFNKLD 233 (250)
T ss_dssp HHHHTTCC
T ss_pred HHHHhccc
Confidence 99998765
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2.5e-11 Score=96.62 Aligned_cols=125 Identities=13% Similarity=0.081 Sum_probs=87.9
Q ss_pred CCceecCCCc-e-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhcc----C---C--CCCCCCcCc--------HHH
Q psy818 78 PNGRFKTNTR-L-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVE----R---S--PTLGSIEMS--------DYE 133 (214)
Q Consensus 78 ~~~~~h~ng~-i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~----~---~--v~i~S~a~~--------~Y~ 133 (214)
.+.++|+.|. . ..++.+.+.++|+..+++| .+++++++.|.+ . + ++++|.++. .|+
T Consensus 86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~ 165 (258)
T 3afn_B 86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYG 165 (258)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHH
T ss_pred CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHH
Confidence 3556775543 1 2235555667899999999 668888888853 1 3 678887542 799
Q ss_pred HHHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 134 RRQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
++|+++.++++.++ .++.+ .+||+|+||.+.|++.... ........... ...++|||||++++||++.+
T Consensus 166 ~sK~a~~~~~~~~~----~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 239 (258)
T 3afn_B 166 AAKAFLHNVHKNWV----DFHTKDGVRFNIVSPGTVDTAFHADK-TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHL 239 (258)
T ss_dssp HHHHHHHHHHHHHH----HHHGGGTEEEEEEEECSBSSGGGTTC-CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHH----HhhcccCeEEEEEeCCCccccccccc-CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcc
Confidence 99999999999998 66654 3999999999999976532 11111222122 22569999999999999854
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.07 E-value=7e-11 Score=91.00 Aligned_cols=124 Identities=12% Similarity=-0.019 Sum_probs=82.7
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHHH-HHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhh
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVST-ILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFN 145 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn~-~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~ 145 (214)
++++|+.|.. ..++.+.+.++|+..+++|. ....+...+.+.+ +++||.++. .|+++|+++.++++.
T Consensus 68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 147 (207)
T 2yut_A 68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEA 147 (207)
T ss_dssp EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHH
Confidence 4456654422 12355667788999999992 2333333333332 788888753 799999999999999
Q ss_pred ccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccccCC
Q psy818 146 LNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVSR 214 (214)
Q Consensus 146 l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~~ 214 (214)
++ .++.+ .++++++||.+.|++..... .....++.|||+|++++++++.+....+.|
T Consensus 148 ~~----~~~~~~gi~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~dva~~~~~~~~~~~~~~~~~ 206 (207)
T 2yut_A 148 AR----KELLREGVHLVLVRLPAVATGLWAPLG--------GPPKGALSPEEAARKVLEGLFREPVPALLE 206 (207)
T ss_dssp HH----HHHHTTTCEEEEECCCCBCSGGGGGGT--------SCCTTCBCHHHHHHHHHHHHC--CCCSCCC
T ss_pred HH----HHHhhhCCEEEEEecCcccCCCccccC--------CCCCCCCCHHHHHHHHHHHHhCCCCccccc
Confidence 98 66643 49999999999998743210 011336799999999999999988776654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.07 E-value=6.7e-11 Score=112.53 Aligned_cols=110 Identities=8% Similarity=0.021 Sum_probs=80.6
Q ss_pred ecCCCC--CCCCcCcccHH-----HHHHHH--HHhhccCC----CCCCCCcCc-----HHHHHHHHHHHH-HhhccCcch
Q psy818 91 SMSDFH--PDTWNPAWSVS-----TILTGL--LSFMVERS----PTLGSIEMS-----DYERRQLAARSL-RFNLNDKNF 151 (214)
Q Consensus 91 ~~l~~~--~e~w~~~~~vn-----~~l~a~--~~~m~~~~----v~i~S~a~~-----~Y~a~K~a~~~~-~~~l~~~~~ 151 (214)
++.+.+ .++|+.++++| .+++.+ .+.|.+++ +++||.++. .|+++|+|+.++ ++.++
T Consensus 581 ~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~Gg~saYaASKAAL~aLttrsLA---- 656 (1688)
T 2pff_A 581 ELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDGMYSESKLSLETLFNRWHS---- 656 (1688)
T ss_dssp CSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSSCBTTHHHHHHHHTHHHHHTTT----
T ss_pred ChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccCCchHHHHHHHHHHHHHHHHHH----
Confidence 455665 67899999999 345666 67887664 899999875 799999999999 77777
Q ss_pred hhhCc-ccccccCccchh-hhhccccCCchhhHhHHhhC--CCCChHhHHHHHHHHhcCC
Q psy818 152 CELFP-DLVQSISPGLVK-SQIFKSSLGDKFDKSLYEAH--PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 152 ~e~~~-~~vn~v~pg~~~-t~~~~~~~~~~~~~~~~~~~--~~~~pedvA~~v~fl~s~p 207 (214)
.++.+ .+||+|+||+++ |++.... + ......... ..++|||||++++||+|..
T Consensus 657 eEla~~IRVNaVaPG~V~TT~M~~~~--e-~~~~~l~~iplR~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 657 ESWANQLTVCGAIIGWTRGTGLMSAN--N-IIAEGIEKMGVRTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp SSCTTTEECCCCCCCCCCCCSSSCTT--T-TCSTTTSSSSCCCCCCCTTHHHHHHHTSTT
T ss_pred HHcCCCeEEEEEEECcCcCCcccCCc--h-HHHHHHHhCCCCCCCHHHHHHHHHHHhCCC
Confidence 45555 499999999999 7765421 0 001111111 3469999999999999876
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.5e-11 Score=98.66 Aligned_cols=94 Identities=19% Similarity=0.223 Sum_probs=75.9
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC-----------------------------------------
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM----------------------------------------- 129 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~----------------------------------------- 129 (214)
++|+..+++| .+++++++.|.+.+ +++||.++
T Consensus 104 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 183 (276)
T 1wma_A 104 IQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 183 (276)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhccccc
Confidence 5688888888 67888888887644 77888532
Q ss_pred -------cHHHHHHHHHHHHHhhccCcchhhhCc------ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhH
Q psy818 130 -------SDYERRQLAARSLRFNLNDKNFCELFP------DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDI 196 (214)
Q Consensus 130 -------~~Y~a~K~a~~~~~~~l~~~~~~e~~~------~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedv 196 (214)
..|+++|+|+..+++.++ .++.+ .+|++|+||.+.|++... ..+.+|+|+
T Consensus 184 ~~~~~~~~~Y~~sK~a~~~~~~~la----~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-------------~~~~~~~~~ 246 (276)
T 1wma_A 184 QKEGWPSSAYGVTKIGVTVLSRIHA----RKLSEQRKGDKILLNACCPGWVRTDMAGP-------------KATKSPEEG 246 (276)
T ss_dssp TTTTCCSCHHHHHHHHHHHHHHHHH----HHHHHHCTTSCCEEEEEECCSBCSTTTCT-------------TCSBCHHHH
T ss_pred ccCCCccchhHHHHHHHHHHHHHHH----HHhhcccCCCceEEEEecCCccccCcCCc-------------cccCChhHh
Confidence 379999999999999998 55543 499999999999987542 135799999
Q ss_pred HHHHHHHhcCCC
Q psy818 197 ANTVEFILSSPP 208 (214)
Q Consensus 197 A~~v~fl~s~p~ 208 (214)
|++++||++.+.
T Consensus 247 a~~~~~l~~~~~ 258 (276)
T 1wma_A 247 AETPVYLALLPP 258 (276)
T ss_dssp THHHHHHHSCCT
T ss_pred hhhHhhhhcCcc
Confidence 999999999774
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.04 E-value=6.4e-11 Score=94.92 Aligned_cols=113 Identities=17% Similarity=0.193 Sum_probs=85.9
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-------------C--CCCCCCcCc------
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-------------S--PTLGSIEMS------ 130 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-------------~--v~i~S~a~~------ 130 (214)
++++|+.|... .++.+.+.++|+..+++| .+++++++.|.++ + +++||.++.
T Consensus 104 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~ 183 (267)
T 1sny_A 104 NVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTD 183 (267)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCS
T ss_pred cEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCCC
Confidence 45666544322 234555667899999998 6788899988653 3 778887642
Q ss_pred ----HHHHHHHHHHHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHh
Q psy818 131 ----DYERRQLAARSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFIL 204 (214)
Q Consensus 131 ----~Y~a~K~a~~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~ 204 (214)
.|+++|+|+.++++.++ .++.+ .+|++|+||.++|++... ..+++|+|+|+.+++++
T Consensus 184 ~~~~~Y~~sK~a~~~~~~~la----~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~~~~~~a~~~~~~~ 246 (267)
T 1sny_A 184 GGMYAYRTSKSALNAATKSLS----VDLYPQRIMCVSLHPGWVKTDMGGS-------------SAPLDVPTSTGQIVQTI 246 (267)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH----HHHGGGTCEEEEECCCSBCSTTTCT-------------TCSBCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHH----HHhhcCCcEEEEeCCcceecCCCCC-------------CCCCCHHHHHHHHHHHH
Confidence 79999999999999999 66654 399999999999987632 13579999999999999
Q ss_pred cCCC
Q psy818 205 SSPP 208 (214)
Q Consensus 205 s~p~ 208 (214)
+.+.
T Consensus 247 ~~~~ 250 (267)
T 1sny_A 247 SKLG 250 (267)
T ss_dssp HHCC
T ss_pred HhcC
Confidence 8653
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=9.7e-11 Score=114.12 Aligned_cols=110 Identities=8% Similarity=0.021 Sum_probs=77.6
Q ss_pred ecCCCC--CCCCcCcccHH-----HHHHHH--HHhhccCC----CCCCCCcCc-----HHHHHHHHHHHH-HhhccCcch
Q psy818 91 SMSDFH--PDTWNPAWSVS-----TILTGL--LSFMVERS----PTLGSIEMS-----DYERRQLAARSL-RFNLNDKNF 151 (214)
Q Consensus 91 ~~l~~~--~e~w~~~~~vn-----~~l~a~--~~~m~~~~----v~i~S~a~~-----~Y~a~K~a~~~~-~~~l~~~~~ 151 (214)
++.+.+ .++|+.++++| .+++.+ ++.|.+++ +++||.++. .|+++|+|+.+| ++.++
T Consensus 780 ~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~gg~~aYaASKAAL~~Lttr~lA---- 855 (1887)
T 2uv8_A 780 ELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDGMYSESKLSLETLFNRWHS---- 855 (1887)
T ss_dssp CGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSSCBTTHHHHHHHGGGHHHHHHH----
T ss_pred ChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccCCCchHHHHHHHHHHHHHHHHH----
Confidence 455665 67899999999 345555 57777654 889998875 799999999999 88888
Q ss_pred hhhCc-ccccccCccchh-hhhccccCCchhhHhHHhhC--CCCChHhHHHHHHHHhcCC
Q psy818 152 CELFP-DLVQSISPGLVK-SQIFKSSLGDKFDKSLYEAH--PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 152 ~e~~~-~~vn~v~pg~~~-t~~~~~~~~~~~~~~~~~~~--~~~~pedvA~~v~fl~s~p 207 (214)
.++.+ .+||+|+||+++ |++.... + ......... ..++|||||++++||+|..
T Consensus 856 ~ela~~IrVNaV~PG~V~tT~m~~~~--~-~~~~~~~~~plr~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 856 ESWANQLTVCGAIIGWTRGTGLMSAN--N-IIAEGIEKMGVRTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp SSCTTTEEEEEEEECCEECC-----C--C-TTHHHHHTTSCCCEEHHHHHHHHHGGGSHH
T ss_pred HHhCCCeEEEEEEecccccccccccc--h-hHHHHHHhcCCCCCCHHHHHHHHHHHhCCC
Confidence 55555 599999999999 7876431 1 111111111 3469999999999999864
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=5.4e-10 Score=108.86 Aligned_cols=111 Identities=8% Similarity=0.008 Sum_probs=79.2
Q ss_pred ecCCCC--CCCCcCcccHHH-----HHHH--HHHhhccCC----CCCCCCcCc-----HHHHHHHHHHHHHhhccCcchh
Q psy818 91 SMSDFH--PDTWNPAWSVST-----ILTG--LLSFMVERS----PTLGSIEMS-----DYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 91 ~~l~~~--~e~w~~~~~vn~-----~l~a--~~~~m~~~~----v~i~S~a~~-----~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
++.+.+ .++|+.++++|. +++. +++.|.+++ |++||.++. .|+++|+|+.+|++.++. .
T Consensus 755 ~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~gg~~aYaASKAAL~aLt~~laA---e 831 (1878)
T 2uv9_A 755 EIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFGNDGLYSESKLALETLFNRWYS---E 831 (1878)
T ss_dssp CTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSSCCSSHHHHHHHHTTHHHHHHH---S
T ss_pred ChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccCCchHHHHHHHHHHHHHHHHHH---H
Confidence 456666 678999999992 3333 567777654 889999875 799999999999887652 2
Q ss_pred hhCc-ccccccCccchh-hhhccccCCchhhHhHHhhC--CCCChHhHHHHHHHHhcCC
Q psy818 153 ELFP-DLVQSISPGLVK-SQIFKSSLGDKFDKSLYEAH--PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 153 e~~~-~~vn~v~pg~~~-t~~~~~~~~~~~~~~~~~~~--~~~~pedvA~~v~fl~s~p 207 (214)
++.+ .+||+|+||+++ |++.... .......... ..++|||||++++||+|..
T Consensus 832 Ela~~IrVNaVaPG~V~gT~m~~~~---~~~~~~~~~~plr~~sPeEVA~avlfLaSd~ 887 (1878)
T 2uv9_A 832 SWGNYLTICGAVIGWTRGTGLMSAN---NLVAEGVEKLGVRTFSQQEMAFNLLGLMAPA 887 (1878)
T ss_dssp TTTTTEEEEEEEECCBCCTTSCSHH---HHTHHHHHTTTCCCBCHHHHHHHHHHHHSHH
T ss_pred HcCCCeEEEEEEecceecCcccccc---hhhHHHHHhcCCCCCCHHHHHHHHHHHhCCc
Confidence 3444 499999999999 9876421 1111111112 3569999999999999854
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.5e-10 Score=88.91 Aligned_cols=118 Identities=11% Similarity=0.110 Sum_probs=83.3
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLR 143 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~ 143 (214)
+.++|+.|.. ..++.+.+.++|+..+++| .+++++.+.|.+.+ ++++|.++. .|+++|+++.+++
T Consensus 60 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~ 139 (202)
T 3d7l_A 60 DAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFA 139 (202)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHHHHHHH
Confidence 4467755432 1234455567788888777 56777777776544 788887654 7999999999999
Q ss_pred hhccCcchhhh-CcccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 144 FNLNDKNFCEL-FPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 144 ~~l~~~~~~e~-~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+.++ .++ .+.+|++++||.+.|++... ........++.|+|||++++++++..
T Consensus 140 ~~~~----~e~~~gi~v~~v~pg~v~~~~~~~-------~~~~~~~~~~~~~dva~~~~~~~~~~ 193 (202)
T 3d7l_A 140 KSAA----IEMPRGIRINTVSPNVLEESWDKL-------EPFFEGFLPVPAAKVARAFEKSVFGA 193 (202)
T ss_dssp HHHT----TSCSTTCEEEEEEECCBGGGHHHH-------GGGSTTCCCBCHHHHHHHHHHHHHSC
T ss_pred HHHH----HHccCCeEEEEEecCccCCchhhh-------hhhccccCCCCHHHHHHHHHHhhhcc
Confidence 9999 454 23499999999999986431 01112234679999999999988543
|
| >3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A | Back alignment and structure |
|---|
Probab=98.89 E-value=2.6e-09 Score=77.84 Aligned_cols=98 Identities=11% Similarity=0.259 Sum_probs=70.7
Q ss_pred HHHHHHHHhcCCCCCeEEe-----ecCCCcccEEEEEECCCCCCCCCcEEEE--EEECCCCCCCCCCeEEEEcC------
Q psy818 12 LKQDYMKLKKDPIPYVIAE-----PNPANILEWFYVVIGPENTQYEGGMYLG--KLVFPRDFPFKPPSIYMITP------ 78 (214)
Q Consensus 12 l~~e~~~l~~~~~~~~~~~-----~~~~~~~~w~~~i~gp~~t~y~gg~f~~--~i~fp~~YP~~pP~v~f~t~------ 78 (214)
..+|+..+.+.-+. +... -...++..|..+|. .+|+|+.|.+ .|-||.+||++||.| |.+|
T Consensus 25 t~~dv~~vl~~yp~-L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 25 TVRETVNVITLYKD-LKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHCTT-EEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hHHHHHHHHHhCCC-CceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 34567666554332 2211 22368899999998 6899999995 899999999999999 6654
Q ss_pred --CceecCCCceeeecCCCCCCCCcC-cccHHHHHHHHHHhhcc
Q psy818 79 --NGRFKTNTRLCLSMSDFHPDTWNP-AWSVSTILTGLLSFMVE 119 (214)
Q Consensus 79 --~~~~h~ng~ic~~~l~~~~e~w~~-~~~vn~~l~a~~~~m~~ 119 (214)
+..++.+|.+|++.++ +|+. ..++..+++.+...+.+
T Consensus 99 ~~~~~Vd~~G~i~lpyL~----~W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLH----EWKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CCBTTBCTTCBBCCHHHH----TCCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEeccccc----ccCCCCCCHHHHHHHHHHHHhh
Confidence 2233456999999873 5987 78888888777776644
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=1.9e-09 Score=109.56 Aligned_cols=107 Identities=14% Similarity=0.072 Sum_probs=73.8
Q ss_pred CCCCCCCCcCc----ccHH-----HHHHHHHHhhccCCC--------CCCCCcCc-----HHHHHHHHHHHHHhhccCcc
Q psy818 93 SDFHPDTWNPA----WSVS-----TILTGLLSFMVERSP--------TLGSIEMS-----DYERRQLAARSLRFNLNDKN 150 (214)
Q Consensus 93 l~~~~e~w~~~----~~vn-----~~l~a~~~~m~~~~v--------~i~S~a~~-----~Y~a~K~a~~~~~~~l~~~~ 150 (214)
.+.+.++|+.. +++| .+++.+.+.|...+. +.++..+. .|+++|+|+.+|+++++
T Consensus 2245 ~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~~g~~~aYsASKaAl~~LtrslA--- 2321 (3089)
T 3zen_D 2245 VAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRGMFGGDGAYGEAKSALDALENRWS--- 2321 (3089)
T ss_dssp CCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTTSCSSCSSHHHHGGGHHHHHHHHH---
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCcccccCCCchHHHHHHHHHHHHHHHHH---
Confidence 34466789888 5665 567888888876541 22333321 79999999999999999
Q ss_pred hhh--hCcc-cccccCccchh-hhhccccCCchhhHhHHhh--CCCCChHhHHHHHHHHhcC
Q psy818 151 FCE--LFPD-LVQSISPGLVK-SQIFKSSLGDKFDKSLYEA--HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 151 ~~e--~~~~-~vn~v~pg~~~-t~~~~~~~~~~~~~~~~~~--~~~~~pedvA~~v~fl~s~ 206 (214)
.| ++++ +||+++||+++ |++.... +. ....... ....+|||||++|+||+|.
T Consensus 2322 -~E~~~a~~IrVn~v~PG~v~tT~l~~~~--~~-~~~~~~~~~~r~~~PeEIA~avlfLaS~ 2379 (3089)
T 3zen_D 2322 -AEKSWAERVSLAHALIGWTKGTGLMGQN--DA-IVSAVEEAGVTTYTTDEMAAMLLDLCTV 2379 (3089)
T ss_dssp -HCSTTTTTEEEEEEECCCEECSTTTTTT--TT-THHHHGGGSCBCEEHHHHHHHHHHTTSH
T ss_pred -hccccCCCeEEEEEeecccCCCcccccc--hh-HHHHHHhcCCCCCCHHHHHHHHHHHhCh
Confidence 66 5555 99999999998 6654321 11 1111111 1235999999999999984
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.9e-09 Score=94.82 Aligned_cols=122 Identities=7% Similarity=-0.056 Sum_probs=85.4
Q ss_pred ceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHHH
Q psy818 80 GRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 80 ~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
+++|+.|..- ..+.+.+.++|+.++++| .+.+.+.+.|+++ + +++||+++. .|+++|+++.+
T Consensus 345 ~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaaaKa~l~~ 424 (525)
T 3qp9_A 345 AVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYAAGTAFLDA 424 (525)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTTCHHHHHHHHHHHH
T ss_pred EEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCCCHHHHHHHHHHHH
Confidence 4566544322 236677778899999999 6688888888654 3 788998865 89999999999
Q ss_pred HHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 142 LRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
|.+.++ . .+.+|++|+||.++|+|.... ............+++|||+++++.++++.+..
T Consensus 425 lA~~~~----~--~gi~v~sI~pG~~~tgm~~~~--~~~~~~~~~g~~~l~pee~a~~l~~~l~~~~~ 484 (525)
T 3qp9_A 425 LAGQHR----A--DGPTVTSVAWSPWEGSRVTEG--ATGERLRRLGLRPLAPATALTALDTALGHGDT 484 (525)
T ss_dssp HHTSCC----S--SCCEEEEEEECCBTTSGGGSS--HHHHHHHHTTBCCBCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHH----h--CCCCEEEEECCccccccccch--hhHHHHHhcCCCCCCHHHHHHHHHHHHhCCCC
Confidence 977665 2 145899999999999887421 11111111223468999999999999977643
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=98.74 E-value=3.8e-09 Score=83.56 Aligned_cols=106 Identities=17% Similarity=0.231 Sum_probs=77.2
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc---------------------------------HHHHH
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS---------------------------------DYERR 135 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~---------------------------------~Y~a~ 135 (214)
+.|+..+++| .+++++.+.|.+.+ +++||.++. .|+++
T Consensus 77 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 156 (255)
T 2dkn_A 77 ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGS 156 (255)
T ss_dssp SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHH
T ss_pred hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHH
Confidence 5688889988 67888899887753 677876532 59999
Q ss_pred HHHHHHHHhhccCcchhhhC--cccccccCccchhhhhccccCCchhhHhHH-----hhCCCCChHhHHHHHHHHhcCC
Q psy818 136 QLAARSLRFNLNDKNFCELF--PDLVQSISPGLVKSQIFKSSLGDKFDKSLY-----EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 136 K~a~~~~~~~l~~~~~~e~~--~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~-----~~~~~~~pedvA~~v~fl~s~p 207 (214)
|+++..+++.++ .++. +.+|++++||.+.|++.............. ....++.|+|+|++++|+++.+
T Consensus 157 K~a~~~~~~~~~----~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 231 (255)
T 2dkn_A 157 KYAVTCLARRNV----VDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQ 231 (255)
T ss_dssp HHHHHHHHHHTH----HHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHH----HHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCC
Confidence 999999999998 5553 349999999999998764321111111111 1123679999999999999865
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=98.26 E-value=3.9e-07 Score=71.46 Aligned_cols=102 Identities=10% Similarity=0.054 Sum_probs=67.5
Q ss_pred CcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc-----HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhh
Q psy818 100 WNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS-----DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKS 169 (214)
Q Consensus 100 w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~-----~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t 169 (214)
|+..+++| .....++..+.+.+ +++||.++. .|+++|+++..+.+.++ .+ +++.++||.+.+
T Consensus 101 ~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~----~~~~vrpg~v~~ 172 (242)
T 2bka_A 101 AEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELK----FD----RYSVFRPGVLLC 172 (242)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTC----CS----EEEEEECCEEEC
T ss_pred cccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCcchHHHHHHHHHHHHHhcC----CC----CeEEEcCceecC
Confidence 55667777 33455555565544 788888754 79999999999988765 22 789999999888
Q ss_pred hhccccCCchhhHhHHh-------hCCCCChHhHHHHHHHHhcCCCc
Q psy818 170 QIFKSSLGDKFDKSLYE-------AHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 170 ~~~~~~~~~~~~~~~~~-------~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+................ ...++.++|||++++++++.+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~ 219 (242)
T 2bka_A 173 DRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD 219 (242)
T ss_dssp TTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred CCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence 75322111111111111 11246999999999999998754
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.3e-07 Score=82.45 Aligned_cols=121 Identities=10% Similarity=0.061 Sum_probs=77.7
Q ss_pred ceecCCCce--eeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhh
Q psy818 80 GRFKTNTRL--CLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFN 145 (214)
Q Consensus 80 ~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~ 145 (214)
+++|+.|.. ...+.+.+.++|+.++++| .-...+...+...+ +++||+++. .|+++|+++.+|++.
T Consensus 322 ~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldala~~ 401 (496)
T 3mje_A 322 AVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEH 401 (496)
T ss_dssp EEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHHHHH
T ss_pred EEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 356654432 1346677778899999988 23344444444433 788998754 899999999999987
Q ss_pred ccCcchhhhCcccccccCccchhhhhccccCCchhhHhHH-hhCCCCChHhHHHHHHHHhcCCC
Q psy818 146 LNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLY-EAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 146 l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++ . .+.++++|+||.+.+...... ........ ....+++|+++++++.++++.+.
T Consensus 402 ~~----~--~Gi~v~sV~pG~w~~~gm~~~--~~~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 402 RR----S--LGLTASSVAWGTWGEVGMATD--PEVHDRLVRQGVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp HH----H--TTCCCEEEEECEESSSCC--------CHHHHHTTEEEECHHHHHHHHHHHHHHTC
T ss_pred HH----h--cCCeEEEEECCcccCCccccC--hHHHHHHHhcCCCCCCHHHHHHHHHHHHcCCC
Confidence 65 2 245899999998865433211 11111111 12235799999999999887653
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.16 E-value=9.4e-08 Score=87.92 Aligned_cols=122 Identities=9% Similarity=-0.026 Sum_probs=78.3
Q ss_pred ceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCCCCCCCCcCc-------HHHHHHHHHHHHHhhc
Q psy818 80 GRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERSPTLGSIEMS-------DYERRQLAARSLRFNL 146 (214)
Q Consensus 80 ~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~v~i~S~a~~-------~Y~a~K~a~~~~~~~l 146 (214)
+++|+.|... ..+.+++.++|+.++++| .+.+++.+.| .=+|+||+++. .|+++|+.+.++.+.+
T Consensus 614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l--~iV~~SS~ag~~g~~g~~~YaAaka~~~alA~~~ 691 (795)
T 3slk_A 614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV--ALVLFSSVSGVLGSGGQGNYAAANSFLDALAQQR 691 (795)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS--EEEEEEETHHHHTCSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC--EEEEEccHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3555433222 246678889999999988 5566666655 22889998865 8999998777666655
Q ss_pred cCcchhhhCcccccccCccchhhhhccccCCchhhHhH-HhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 147 NDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSL-YEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 147 ~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
+ . .+.+||+|+||.+.|........+...... .....+++++|+.+.+.+++..+..
T Consensus 692 ~----~--~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~~ 749 (795)
T 3slk_A 692 Q----S--RGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAHT 749 (795)
T ss_dssp H----H--TTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSCS
T ss_pred H----H--cCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCc
Confidence 4 2 245899999999987644321111111111 1223467888888888777766543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.02 E-value=2.6e-06 Score=74.65 Aligned_cols=122 Identities=11% Similarity=0.052 Sum_probs=78.5
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHHH-HHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHHHHHHHh
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVST-ILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLAARSLRF 144 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn~-~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a~~~~~~ 144 (214)
++++|+.|.... .+.+.+.++|+.++++|. -...+...+... + +++||+++. .|+++|+++.++++
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~ 416 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAE 416 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHH
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 456775543322 345566678888888882 222333333322 2 788888754 89999999999998
Q ss_pred hccCcchhhhCcccccccCccch-hhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 145 NLNDKNFCELFPDLVQSISPGLV-KSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 145 ~l~~~~~~e~~~~~vn~v~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.++ . .+.++++|+||.+ +|.|.... ...........+++|||+++++..++..+..
T Consensus 417 ~~~----~--~gi~v~sv~pG~~~~tgm~~~~---~~~~~~~~g~~~l~~e~~a~~l~~al~~~~~ 473 (511)
T 2z5l_A 417 RRR----A--AGLPATSVAWGLWGGGGMAAGA---GEESLSRRGLRAMDPDAAVDALLGAMGRNDV 473 (511)
T ss_dssp HHH----T--TTCCCEEEEECCBCSTTCCCCH---HHHHHHHHTBCCBCHHHHHHHHHHHHHHTCS
T ss_pred HHH----H--cCCcEEEEECCcccCCcccccc---cHHHHHhcCCCCCCHHHHHHHHHHHHhCCCC
Confidence 765 2 1448899999988 67665321 1111111234578999999999999876643
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=2.9e-06 Score=73.90 Aligned_cols=122 Identities=9% Similarity=0.001 Sum_probs=73.9
Q ss_pred CceecCCCceee-ecCCCCCCCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhh
Q psy818 79 NGRFKTNTRLCL-SMSDFHPDTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFN 145 (214)
Q Consensus 79 ~~~~h~ng~ic~-~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~ 145 (214)
++++|+.|.... .+.+.+.++|+.++++| .-...+...+...+ +++||+++. .|+++|+++.++.+.
T Consensus 308 d~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~la~~ 387 (486)
T 2fr1_A 308 SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQ 387 (486)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHH
T ss_pred cEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 345665443222 24456677899999998 22333344444333 788887643 899999999999876
Q ss_pred ccCcchhhhCcccccccCccchhhh-hccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 146 LNDKNFCELFPDLVQSISPGLVKSQ-IFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 146 l~~~~~~e~~~~~vn~v~pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++ . .+.++++|+||.+.+. |..... ..... .....+++|||+++++.+++..+..
T Consensus 388 ~~----~--~gi~v~~i~pG~~~~~gm~~~~~-~~~~~--~~g~~~i~~e~~a~~l~~~l~~~~~ 443 (486)
T 2fr1_A 388 RR----S--DGLPATAVAWGTWAGSGMAEGPV-ADRFR--RHGVIEMPPETACRALQNALDRAEV 443 (486)
T ss_dssp HH----H--TTCCCEEEEECCBC-------------CT--TTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred HH----h--cCCeEEEEECCeeCCCcccchhH-HHHHH--hcCCCCCCHHHHHHHHHHHHhCCCC
Confidence 54 2 2448999999988765 332110 00000 0122368999999999999987643
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0001 Score=58.71 Aligned_cols=108 Identities=9% Similarity=0.014 Sum_probs=66.9
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc-------------------HHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS-------------------DYER 134 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~-------------------~Y~a 134 (214)
+.++|+.|. ...+.|+..+++| ..+..++..+++.+ +++||.++. .|++
T Consensus 66 D~vi~~Ag~-------~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~ 138 (267)
T 3rft_A 66 DGIVHLGGI-------SVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGV 138 (267)
T ss_dssp SEEEECCSC-------CSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHH
T ss_pred CEEEECCCC-------cCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHH
Confidence 556775443 1346799999999 22233333333333 778876532 7999
Q ss_pred HHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 135 RQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 135 ~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+|++...+++.++ .+. ..+++.|.||.+.++.... .... ..+.++|+|+++..++..+.
T Consensus 139 sK~~~e~~~~~~a----~~~-g~~~~~vr~~~v~~~~~~~----~~~~------~~~~~~d~a~~~~~~~~~~~ 197 (267)
T 3rft_A 139 SKCFGENLARMYF----DKF-GQETALVRIGSCTPEPNNY----RMLS------TWFSHDDFVSLIEAVFRAPV 197 (267)
T ss_dssp HHHHHHHHHHHHH----HHH-CCCEEEEEECBCSSSCCST----THHH------HBCCHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHH----HHh-CCeEEEEEeecccCCCCCC----Ccee------eEEcHHHHHHHHHHHHhCCC
Confidence 9999999999887 443 3355566666655443211 0011 13678999999998887764
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=3.1e-05 Score=59.77 Aligned_cols=90 Identities=8% Similarity=-0.011 Sum_probs=58.1
Q ss_pred HHHHHHhhccCC----CCCCCCcCc-----------------HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchh
Q psy818 110 LTGLLSFMVERS----PTLGSIEMS-----------------DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVK 168 (214)
Q Consensus 110 l~a~~~~m~~~~----v~i~S~a~~-----------------~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~ 168 (214)
++.+++.|++.+ +++||..+. .|+++|.++..+.+. ...+++.|+||.+.
T Consensus 88 ~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~---------~~i~~~~vrpg~v~ 158 (221)
T 3r6d_A 88 MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRE---------SNLNYTILRLTWLY 158 (221)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH---------SCSEEEEEEECEEE
T ss_pred HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHh---------CCCCEEEEechhhc
Confidence 777888887665 678887643 589999988877653 23478889999887
Q ss_pred hhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHh--cCCCc
Q psy818 169 SQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFIL--SSPPH 209 (214)
Q Consensus 169 t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~--s~p~~ 209 (214)
++.......... ........++++||||++++|++ +.+..
T Consensus 159 ~~~~~~~~~~~~-~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~ 200 (221)
T 3r6d_A 159 NDPEXTDYELIP-EGAQFNDAQVSREAVVKAIFDILHAADETP 200 (221)
T ss_dssp CCTTCCCCEEEC-TTSCCCCCEEEHHHHHHHHHHHHTCSCCGG
T ss_pred CCCCCcceeecc-CCccCCCceeeHHHHHHHHHHHHHhcChhh
Confidence 652211110000 00001112468999999999999 88753
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.19 E-value=7.4e-05 Score=58.18 Aligned_cols=100 Identities=9% Similarity=0.009 Sum_probs=62.5
Q ss_pred CCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc----------HHHHHHHHHHHHHhhccCcchhhhCccccccc
Q psy818 98 DTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS----------DYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162 (214)
Q Consensus 98 e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~----------~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v 162 (214)
++|+..+++| .....++..+++.+ +++||..+. .|+++|++++.+.+. .+.+++.+
T Consensus 98 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~---------~gi~~~~l 168 (236)
T 3e8x_A 98 TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKR---------SSLDYTIV 168 (236)
T ss_dssp SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHH---------SSSEEEEE
T ss_pred CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHH---------CCCCEEEE
Confidence 5688887777 22333344443333 677776532 799999999887651 23478899
Q ss_pred CccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 163 SPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 163 ~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+||.+.++......... ........++.++|||++++++++.+.
T Consensus 169 rpg~v~~~~~~~~~~~~--~~~~~~~~~i~~~Dva~~~~~~~~~~~ 212 (236)
T 3e8x_A 169 RPGPLSNEESTGKVTVS--PHFSEITRSITRHDVAKVIAELVDQQH 212 (236)
T ss_dssp EECSEECSCCCSEEEEE--SSCSCCCCCEEHHHHHHHHHHHTTCGG
T ss_pred eCCcccCCCCCCeEEec--cCCCcccCcEeHHHHHHHHHHHhcCcc
Confidence 99988776432211000 000011335799999999999999873
|
| >2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0078 Score=43.01 Aligned_cols=70 Identities=4% Similarity=-0.015 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecC------CCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNP------ANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~------~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
...+-..|+..|+.-.+..+...... +....+.+.|....+ .-..-.+.|.+.||++||..||.|.+...
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 11 YYEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred hHHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 34466789999988655444332111 135677888874322 11234788999999999999999988754
|
| >2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0037 Score=44.13 Aligned_cols=68 Identities=10% Similarity=0.048 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEc
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMIT 77 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 77 (214)
...+...|+..|+.-.+..+... ++....+.+.|..-.+..-+.-.+.|.+.||++||..||.+.+..
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 45667889999988655555442 223456666665322222234578999999999999999998765
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.001 Score=53.82 Aligned_cols=122 Identities=11% Similarity=0.006 Sum_probs=71.5
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcC------------------cHHHH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEM------------------SDYER 134 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~------------------~~Y~a 134 (214)
.+.++|..|.. ..+.+.++|...+++| ..+..++..+.+.+ +++||.+. ..|++
T Consensus 64 ~d~vih~a~~~---~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~ 140 (313)
T 3ehe_A 64 AEEVWHIAANP---DVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGA 140 (313)
T ss_dssp CSEEEECCCCC---CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHH
T ss_pred CCEEEECCCCC---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHH
Confidence 35567755422 2233457788888888 33444444454433 67787653 16999
Q ss_pred HHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHHh-------------hCCCCChHhHHHHHH
Q psy818 135 RQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYE-------------AHPCLQAEDIANTVE 201 (214)
Q Consensus 135 ~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~-------------~~~~~~pedvA~~v~ 201 (214)
+|++...+.+.++ .+. +.+++.+.|+.+-.+......-......... ...++..+|+|++++
T Consensus 141 sK~~~e~~~~~~~----~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~ 215 (313)
T 3ehe_A 141 SKLACEALIESYC----HTF-DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAML 215 (313)
T ss_dssp HHHHHHHHHHHHH----HHT-TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----Hhc-CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHH
Confidence 9999999999987 333 3467777777765442211000000010000 012457899999999
Q ss_pred HHhcCC
Q psy818 202 FILSSP 207 (214)
Q Consensus 202 fl~s~p 207 (214)
++++.+
T Consensus 216 ~~~~~~ 221 (313)
T 3ehe_A 216 FGLRGD 221 (313)
T ss_dssp HHTTCC
T ss_pred HHhccC
Confidence 999843
|
| >2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0088 Score=42.10 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecC--CCcccEEEEEECCCCCCC--CCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 10 ARLKQDYMKLKKDPIPYVIAEPNP--ANILEWFYVVIGPENTQY--EGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 10 ~rl~~e~~~l~~~~~~~~~~~~~~--~~~~~w~~~i~gp~~t~y--~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
.....|+..|+.-.+..+...... .+...+.+.+..+.+..- ..-.+.|.+.||++||..+|.|.+.++
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 467899999988665556554222 133444555542222111 124788999999999999999987754
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.00064 Score=52.89 Aligned_cols=102 Identities=12% Similarity=-0.055 Sum_probs=59.6
Q ss_pred CCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc------------HHHHHHHHHHHHHhhccCcchhhhCccccc
Q psy818 98 DTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS------------DYERRQLAARSLRFNLNDKNFCELFPDLVQ 160 (214)
Q Consensus 98 e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~------------~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn 160 (214)
+.|...+++| .....++..+.+.+ +++||.++. .|+.+|++++.+.+. .+.+++
T Consensus 100 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~---------~~i~~~ 170 (253)
T 1xq6_A 100 EDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD---------SGTPYT 170 (253)
T ss_dssp CTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHT---------SSSCEE
T ss_pred cccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHHHHh---------CCCceE
Confidence 4566667777 33444444444333 667776542 366799998877643 234778
Q ss_pred ccCccchhhhhcccc-CCchhhHhHHh-hCCCCChHhHHHHHHHHhcCCC
Q psy818 161 SISPGLVKSQIFKSS-LGDKFDKSLYE-AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 161 ~v~pg~~~t~~~~~~-~~~~~~~~~~~-~~~~~~pedvA~~v~fl~s~p~ 208 (214)
.++||.+.++..... ........... ...++.++|+|++++++++.+.
T Consensus 171 ~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~ 220 (253)
T 1xq6_A 171 IIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE 220 (253)
T ss_dssp EEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGG
T ss_pred EEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCcc
Confidence 888888776542210 00000011111 1235689999999999998763
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.00099 Score=52.67 Aligned_cols=107 Identities=14% Similarity=0.063 Sum_probs=66.1
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcC-------------------cHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEM-------------------SDYER 134 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~-------------------~~Y~a 134 (214)
+.++|..|.. ..+.|...+++| ..+..++..+.+.+ +++||.+. ..|++
T Consensus 65 d~vi~~a~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~ 137 (267)
T 3ay3_A 65 DGIIHLGGVS-------VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGL 137 (267)
T ss_dssp SEEEECCSCC-------SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHH
T ss_pred CEEEECCcCC-------CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHH
Confidence 4566654432 235677777777 22333333333333 56666531 37999
Q ss_pred HHHHHHHHHhhccCcchhhhCcccccccCccch-hhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 135 RQLAARSLRFNLNDKNFCELFPDLVQSISPGLV-KSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 135 ~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+|++++.+.+.++ .+ .+.+++.+.||.+ .++. .. . ....++.++|+|++++.++..+.
T Consensus 138 sK~~~e~~~~~~~----~~-~gi~~~~lrp~~v~~~~~------~~---~--~~~~~~~~~dva~~~~~~~~~~~ 196 (267)
T 3ay3_A 138 SKCFGEDLASLYY----HK-FDIETLNIRIGSCFPKPK------DA---R--MMATWLSVDDFMRLMKRAFVAPK 196 (267)
T ss_dssp HHHHHHHHHHHHH----HT-TCCCEEEEEECBCSSSCC------SH---H--HHHHBCCHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHH----HH-cCCCEEEEeceeecCCCC------CC---C--eeeccccHHHHHHHHHHHHhCCC
Confidence 9999999988875 22 2447888888876 3321 10 0 01124789999999999998764
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00091 Score=53.92 Aligned_cols=120 Identities=9% Similarity=-0.015 Sum_probs=70.9
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcC------------------cHHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEM------------------SDYERR 135 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~------------------~~Y~a~ 135 (214)
+.++|..|.. ..+...++|...+++| ..+..++..+.+.+ +++||.+. ..|+++
T Consensus 64 d~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~s 140 (312)
T 3ko8_A 64 DVVFHFAANP---EVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAA 140 (312)
T ss_dssp SEEEECCSSC---SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred CEEEECCCCC---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHH
Confidence 5678865522 1223346788888888 22333333333322 56666542 279999
Q ss_pred HHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHHhh-------------CCCCChHhHHHHHHH
Q psy818 136 QLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEA-------------HPCLQAEDIANTVEF 202 (214)
Q Consensus 136 K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~-------------~~~~~pedvA~~v~f 202 (214)
|++.+.+.+.++ .+. +.+++.+.||.+-++................. ..++.++|+|+++++
T Consensus 141 K~~~e~~~~~~~----~~~-g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 215 (312)
T 3ko8_A 141 KAAGEVMCATYA----RLF-GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLA 215 (312)
T ss_dssp HHHHHHHHHHHH----HHH-CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHh-CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHH
Confidence 999999999987 443 44788888888766543211000111111111 113469999999999
Q ss_pred HhcC
Q psy818 203 ILSS 206 (214)
Q Consensus 203 l~s~ 206 (214)
++..
T Consensus 216 ~~~~ 219 (312)
T 3ko8_A 216 AWKK 219 (312)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9986
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.00077 Score=68.91 Aligned_cols=67 Identities=10% Similarity=0.034 Sum_probs=39.9
Q ss_pred eecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhh
Q psy818 81 RFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFN 145 (214)
Q Consensus 81 ~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~ 145 (214)
++|+.|... ..+.+++.++|+.++++| .+.+.+.+.|...+ |++||+++. .|+++|+|+.+|++.
T Consensus 1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~l~~~ 2047 (2512)
T 2vz8_A 1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAMERICEK 2047 (2512)
T ss_dssp EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHHHHHHHH
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 455434221 246778889999999999 45567778776666 899998764 899999999999995
Q ss_pred cc
Q psy818 146 LN 147 (214)
Q Consensus 146 l~ 147 (214)
++
T Consensus 2048 rr 2049 (2512)
T 2vz8_A 2048 RR 2049 (2512)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0024 Score=51.97 Aligned_cols=73 Identities=19% Similarity=0.161 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcc-cccccCccchhhhhccccCCc----hhhHhH--------Hhh---CCCCChH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSSLGD----KFDKSL--------YEA---HPCLQAE 194 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~~~~----~~~~~~--------~~~---~~~~~pe 194 (214)
.|+++|++.+.+.+.++ .+..++ +++.+.||.+.++........ ...... ... ..++.++
T Consensus 175 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 250 (342)
T 1y1p_A 175 VYAASKTEAELAAWKFM----DENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV 250 (342)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHH
T ss_pred HHHHHHHHHHHHHHHHH----HhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHH
Confidence 69999999999999987 555444 788889998876643321100 000111 011 1145899
Q ss_pred hHHHHHHHHhcCC
Q psy818 195 DIANTVEFILSSP 207 (214)
Q Consensus 195 dvA~~v~fl~s~p 207 (214)
|||+++++++..+
T Consensus 251 Dva~a~~~~~~~~ 263 (342)
T 1y1p_A 251 DIGLLHLGCLVLP 263 (342)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCc
Confidence 9999999999765
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0041 Score=47.64 Aligned_cols=102 Identities=12% Similarity=-0.007 Sum_probs=62.8
Q ss_pred cccHH-HHHHHHHHhhccCC----CCCCCCcC-----------------cHHHHHHHHHHHHHhhccCcchhhhCccccc
Q psy818 103 AWSVS-TILTGLLSFMVERS----PTLGSIEM-----------------SDYERRQLAARSLRFNLNDKNFCELFPDLVQ 160 (214)
Q Consensus 103 ~~~vn-~~l~a~~~~m~~~~----v~i~S~a~-----------------~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn 160 (214)
.+++| ..++.++..+.+.+ +.+||.++ ..|+.+|++.+.+.+.++ .+ .+.+++
T Consensus 84 ~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~----~~-~~~~~~ 158 (227)
T 3dhn_A 84 IYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLM----KE-KEIDWV 158 (227)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGG----GC-CSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh----hc-cCccEE
Confidence 67777 34455555555544 66777653 279999999999888887 32 234778
Q ss_pred ccCccchhhhhccccCCc-hhhHhH--HhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 161 SISPGLVKSQIFKSSLGD-KFDKSL--YEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 161 ~v~pg~~~t~~~~~~~~~-~~~~~~--~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
.+.||.+-++........ ...... .....++.++|||+++++++..|..
T Consensus 159 ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~ 210 (227)
T 3dhn_A 159 FFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKH 210 (227)
T ss_dssp EEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCC
T ss_pred EEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccc
Confidence 888888754432111000 000000 0112246899999999999998864
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.00058 Score=53.16 Aligned_cols=99 Identities=9% Similarity=-0.012 Sum_probs=49.8
Q ss_pred HHHHHHHHhhccCC----CCCCCCcCcH-------HHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccC
Q psy818 108 TILTGLLSFMVERS----PTLGSIEMSD-------YERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSL 176 (214)
Q Consensus 108 ~~l~a~~~~m~~~~----v~i~S~a~~~-------Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~ 176 (214)
..++.+++.|++.+ |++||..+.. +...+.....+....+.+...+-.+.+++.|+||.+.++......
T Consensus 103 ~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~~~~ 182 (236)
T 3qvo_A 103 IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYE 182 (236)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEECCSCCCCE
T ss_pred HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCcceE
Confidence 45677788887765 7888877531 000000000000000001001122348999999988765432110
Q ss_pred CchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 177 GDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 177 ~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
...........+++++|||++++|+++.+.
T Consensus 183 --~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~ 212 (236)
T 3qvo_A 183 --LTSRNEPFKGTIVSRKSVAALITDIIDKPE 212 (236)
T ss_dssp --EECTTSCCSCSEEEHHHHHHHHHHHHHSTT
T ss_pred --EeccCCCCCCcEECHHHHHHHHHHHHcCcc
Confidence 000000001124699999999999999886
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0012 Score=53.90 Aligned_cols=122 Identities=15% Similarity=0.082 Sum_probs=70.8
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC------------------cHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM------------------SDYE 133 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~------------------~~Y~ 133 (214)
+.++|..|.... +.+.++|...+++| .+++++.. +...+ +++||.+. ..|+
T Consensus 77 d~vih~A~~~~~---~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~ 152 (345)
T 2z1m_A 77 DEVYNLAAQSFV---GVSFEQPILTAEVDAIGVLRILEALRT-VKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYA 152 (345)
T ss_dssp SEEEECCCCCCH---HHHTTSHHHHHHHHTHHHHHHHHHHHH-HCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred CEEEECCCCcch---hhhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhH
Confidence 557776543211 11236788888888 45555553 32213 66776631 1799
Q ss_pred HHHHHHHHHHhhccCcchhhhC-----cccccccCccchhhhhcccc---C-----Cch---hhHhHHhhCCCCChHhHH
Q psy818 134 RRQLAARSLRFNLNDKNFCELF-----PDLVQSISPGLVKSQIFKSS---L-----GDK---FDKSLYEAHPCLQAEDIA 197 (214)
Q Consensus 134 a~K~a~~~~~~~l~~~~~~e~~-----~~~vn~v~pg~~~t~~~~~~---~-----~~~---~~~~~~~~~~~~~pedvA 197 (214)
++|++.+.+.+.++ .+.. ..+++.+.||...+.+.... . +.. ..........++.++|+|
T Consensus 153 ~sK~~~e~~~~~~~----~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva 228 (345)
T 2z1m_A 153 VAKLFGHWITVNYR----EAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYV 228 (345)
T ss_dssp HHHHHHHHHHHHHH----HHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHH----HHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHH
Confidence 99999999999887 3332 22677888887765432110 0 000 000000011256899999
Q ss_pred HHHHHHhcCCC
Q psy818 198 NTVEFILSSPP 208 (214)
Q Consensus 198 ~~v~fl~s~p~ 208 (214)
++++++++.+.
T Consensus 229 ~a~~~~~~~~~ 239 (345)
T 2z1m_A 229 EAMWLMMQQPE 239 (345)
T ss_dssp HHHHHHHTSSS
T ss_pred HHHHHHHhCCC
Confidence 99999998764
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0018 Score=53.47 Aligned_cols=103 Identities=12% Similarity=-0.004 Sum_probs=62.5
Q ss_pred CcCcccHH-----HHHHHHHHhhccCCCCCCCCcCc----HHHHHHHHHHHHHhhccCcchhhhC--cccccccCccchh
Q psy818 100 WNPAWSVS-----TILTGLLSFMVERSPTLGSIEMS----DYERRQLAARSLRFNLNDKNFCELF--PDLVQSISPGLVK 168 (214)
Q Consensus 100 w~~~~~vn-----~~l~a~~~~m~~~~v~i~S~a~~----~Y~a~K~a~~~~~~~l~~~~~~e~~--~~~vn~v~pg~~~ 168 (214)
+...+++| .+++++.+.-..+=+++||..+. .|+++|++...+.+.++ .++. +.+++++.||.+-
T Consensus 111 ~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~E~~~~~~~----~~~~~~g~~~~~vRpg~v~ 186 (344)
T 2gn4_A 111 PLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSAN----NFKGSSQTQFSVVRYGNVV 186 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHHHHHHHHGG----GCCCSSCCEEEEECCCEET
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHHHHHHHHHH----HHhCCCCcEEEEEEeccEE
Confidence 45566677 34444444321111778887654 89999999999999987 4443 3388889999876
Q ss_pred hhhccccCCchhhHhHHhh------------CCCCChHhHHHHHHHHhcCCC
Q psy818 169 SQIFKSSLGDKFDKSLYEA------------HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 169 t~~~~~~~~~~~~~~~~~~------------~~~~~pedvA~~v~fl~s~p~ 208 (214)
++... .. .......... ..++.++|+|+++++++..+.
T Consensus 187 g~~~~-~i-~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~ 236 (344)
T 2gn4_A 187 GSRGS-VV-PFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH 236 (344)
T ss_dssp TCTTS-HH-HHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCC
T ss_pred CCCCC-HH-HHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhcc
Confidence 64211 00 0000000000 114589999999999997653
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.00099 Score=50.62 Aligned_cols=102 Identities=10% Similarity=-0.003 Sum_probs=60.5
Q ss_pred CCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc-----HHHHHHHHHHHHHhhccCcchhhhCccc-ccccCccc
Q psy818 98 DTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS-----DYERRQLAARSLRFNLNDKNFCELFPDL-VQSISPGL 166 (214)
Q Consensus 98 e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~-----~Y~a~K~a~~~~~~~l~~~~~~e~~~~~-vn~v~pg~ 166 (214)
+.|+..+++| .....++..+.+.+ +++||.... .|+++|++++.+.+.. +.+ ++.+.||.
T Consensus 81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~y~~sK~~~e~~~~~~---------~~~~~~~vrp~~ 151 (215)
T 2a35_A 81 GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQ---------GWPQLTIARPSL 151 (215)
T ss_dssp SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTS---------CCSEEEEEECCS
T ss_pred CCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCccHHHHHHHHHHHHHHHc---------CCCeEEEEeCce
Confidence 4577777777 33444444444433 677887654 8999999999887653 234 67777877
Q ss_pred hhhhhccccCCchhh---HhHHh-hCCCCChHhHHHHHHHHhcCCC
Q psy818 167 VKSQIFKSSLGDKFD---KSLYE-AHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 167 ~~t~~~~~~~~~~~~---~~~~~-~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.++........... ..... ...+..++|+|++++.++..+.
T Consensus 152 v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 197 (215)
T 2a35_A 152 LFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG 197 (215)
T ss_dssp EESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred eeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC
Confidence 765432110000000 00000 1113578999999999998875
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0039 Score=50.78 Aligned_cols=71 Identities=11% Similarity=0.046 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhc-cccCCchhhHhHHhhC---------CCCChHhHHHHH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIF-KSSLGDKFDKSLYEAH---------PCLQAEDIANTV 200 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~-~~~~~~~~~~~~~~~~---------~~~~pedvA~~v 200 (214)
.|+.+|++.+.+.+.++ .. +.+++.+.||.+-++.. .... ........... .++.++|+|+++
T Consensus 154 ~Y~~sK~~~e~~~~~~~----~~--g~~~~ilrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 226 (342)
T 2x4g_A 154 SYVLCKWALDEQAREQA----RN--GLPVVIGIPGMVLGELDIGPTT-GRVITAIGNGEMTHYVAGQRNVIDAAEAGRGL 226 (342)
T ss_dssp HHHHHHHHHHHHHHHHH----HT--TCCEEEEEECEEECSCCSSCST-THHHHHHHTTCCCEEECCEEEEEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHh----hc--CCcEEEEeCCceECCCCccccH-HHHHHHHHcCCCccccCCCcceeeHHHHHHHH
Confidence 79999999999998876 33 44778888888766543 1011 11111111111 145899999999
Q ss_pred HHHhcCCC
Q psy818 201 EFILSSPP 208 (214)
Q Consensus 201 ~fl~s~p~ 208 (214)
+++++.+.
T Consensus 227 ~~~~~~~~ 234 (342)
T 2x4g_A 227 LMALERGR 234 (342)
T ss_dssp HHHHHHSC
T ss_pred HHHHhCCC
Confidence 99998654
|
| >2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.048 Score=39.73 Aligned_cols=74 Identities=12% Similarity=0.010 Sum_probs=46.0
Q ss_pred CCCCchHHHHHHHHHHHHHhcCCC--CCeEEeec-------------CCC-c--ccEEEEEECCCCCCCCCcEEEEEEEC
Q psy818 1 MSSKHCGATARLKQDYMKLKKDPI--PYVIAEPN-------------PAN-I--LEWFYVVIGPENTQYEGGMYLGKLVF 62 (214)
Q Consensus 1 ~~~~~~~~~~rl~~e~~~l~~~~~--~~~~~~~~-------------~~~-~--~~w~~~i~gp~~t~y~gg~f~~~i~f 62 (214)
|+.+......+-..|+..|..-.+ ..+.+.-. ..+ . ..+.+.|.-.. + ...+.+.|.|
T Consensus 8 ~~~~~~~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~~~--~--~~~i~L~v~l 83 (154)
T 2daw_A 8 MSASVKESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIEE--P--KVKIDLQVTM 83 (154)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEETT--T--TEEEEEEEEE
T ss_pred chhhhhhhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEecCC--C--CceEEEEEEc
Confidence 444444556677889999988654 44544210 001 2 34454443211 1 2389999999
Q ss_pred CCCCCCCCCeEEEEcC
Q psy818 63 PRDFPFKPPSIYMITP 78 (214)
Q Consensus 63 p~~YP~~pP~v~f~t~ 78 (214)
|.+||..+|.|.....
T Consensus 84 P~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 84 PHSYPYLALQLFGRSS 99 (154)
T ss_dssp CSSTTSSCCEEEEECS
T ss_pred CCCCCCCCCcEEEEeC
Confidence 9999999999987764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0032 Score=51.93 Aligned_cols=123 Identities=10% Similarity=-0.011 Sum_probs=67.1
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC---CCCCCCcCc-----------------HHHHHH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS---PTLGSIEMS-----------------DYERRQ 136 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~---v~i~S~a~~-----------------~Y~a~K 136 (214)
.+.++|..|. .+.+.++|...+++| ..+..++..+.+.+ +++||.+.. .|+++|
T Consensus 91 ~D~vih~A~~-----~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK 165 (362)
T 3sxp_A 91 FDYLFHQAAV-----SDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSK 165 (362)
T ss_dssp CSEEEECCCC-----CGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHH
T ss_pred CCEEEECCcc-----CCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHH
Confidence 3557775542 122447788889988 33444444444444 667774421 499999
Q ss_pred HHHHHHHhhccCcchhhhCcccc-cccCccchhhhhccccCCchhhHhHHh------------hCCCCChHhHHHHHHHH
Q psy818 137 LAARSLRFNLNDKNFCELFPDLV-QSISPGLVKSQIFKSSLGDKFDKSLYE------------AHPCLQAEDIANTVEFI 203 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~~~v-n~v~pg~~~t~~~~~~~~~~~~~~~~~------------~~~~~~pedvA~~v~fl 203 (214)
++.+.+.+.++.+ ....-.|+ +...||...+....... ......... ...++.++|||++++++
T Consensus 166 ~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~ 242 (362)
T 3sxp_A 166 LCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMV-LQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKA 242 (362)
T ss_dssp HHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHH-HHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHH-HHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHH
Confidence 9999999998833 11111133 33445543321110000 000000000 01145799999999999
Q ss_pred hcCCC
Q psy818 204 LSSPP 208 (214)
Q Consensus 204 ~s~p~ 208 (214)
++.+.
T Consensus 243 ~~~~~ 247 (362)
T 3sxp_A 243 MKAQK 247 (362)
T ss_dssp TTCSS
T ss_pred HhcCC
Confidence 98764
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0016 Score=53.62 Aligned_cols=122 Identities=9% Similarity=-0.028 Sum_probs=74.4
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhcc-C-------C-CCCCCCc---------------
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVE-R-------S-PTLGSIE--------------- 128 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~-~-------~-v~i~S~a--------------- 128 (214)
.+.++|..|..... .+.++|...+++| .+++++.+.|.. + . +++||.+
T Consensus 74 ~d~vih~A~~~~~~---~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~ 150 (361)
T 1kew_A 74 PDAVMHLAAESHVD---RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV 150 (361)
T ss_dssp CSEEEECCSCCCHH---HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred CCEEEECCCCcChh---hhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence 35577765432211 1224677888888 567777777643 2 2 5666632
Q ss_pred -------------CcHHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccC-CchhhHhHHhhC------
Q psy818 129 -------------MSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSL-GDKFDKSLYEAH------ 188 (214)
Q Consensus 129 -------------~~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~-~~~~~~~~~~~~------ 188 (214)
...|+++|++...+.+.++ .+. +.+++.+.||.+.++...... ............
T Consensus 151 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~-gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1kew_A 151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWR----RTY-GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG 225 (361)
T ss_dssp CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHH----HHH-CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH----HHh-CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcC
Confidence 1279999999999999987 443 457888999988776532100 000111111110
Q ss_pred ------CCCChHhHHHHHHHHhcCC
Q psy818 189 ------PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 189 ------~~~~pedvA~~v~fl~s~p 207 (214)
.++.++|+|++++++++.+
T Consensus 226 ~~~~~~~~i~v~Dva~a~~~~~~~~ 250 (361)
T 1kew_A 226 KGDQIRDWLYVEDHARALHMVVTEG 250 (361)
T ss_dssp TSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred CCceeEeeEEHHHHHHHHHHHHhCC
Confidence 1347999999999999764
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.014 Score=44.34 Aligned_cols=100 Identities=12% Similarity=-0.048 Sum_probs=60.6
Q ss_pred ccHH-HHHHHHHHhhccCC---CCCCCCcC---------------------cHHHHHHHHHHHHHhhccCcchhhhCccc
Q psy818 104 WSVS-TILTGLLSFMVERS---PTLGSIEM---------------------SDYERRQLAARSLRFNLNDKNFCELFPDL 158 (214)
Q Consensus 104 ~~vn-~~l~a~~~~m~~~~---v~i~S~a~---------------------~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~ 158 (214)
..+| ..++.+++.+++.+ +++||.++ ..|+++|++.+.+....+ -.+.+
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~------~~~i~ 152 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQM------NANVN 152 (224)
T ss_dssp THHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTT------CTTSC
T ss_pred hhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHh------cCCCc
Confidence 3445 55778888887765 67777642 269999999886633222 12347
Q ss_pred ccccCccchhhhhccccCC--chhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 159 VQSISPGLVKSQIFKSSLG--DKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 159 vn~v~pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
++.+.||.+.++....... ............++.++|||+++++++..|..
T Consensus 153 ~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~ 205 (224)
T 3h2s_A 153 WIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTA 205 (224)
T ss_dssp EEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCC
T ss_pred EEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCccc
Confidence 7888888876552111000 00000000112357999999999999998864
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0077 Score=48.54 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchh--hHhHHhh-------C--CCCChHhHHHH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKF--DKSLYEA-------H--PCLQAEDIANT 199 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~--~~~~~~~-------~--~~~~pedvA~~ 199 (214)
.|+++|++.+.+.+.++ .+ .+.+++.+.||.+.++.......... ....... . .++.++|||++
T Consensus 159 ~Y~~sK~~~e~~~~~~~----~~-~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a 233 (322)
T 2p4h_X 159 NYAVSKTLAEKAVLEFG----EQ-NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARA 233 (322)
T ss_dssp HHHHHHHHHHHHHHHHH----HH-TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH----Hh-cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHH
Confidence 59999998777665543 21 24478889999887765332111100 0000000 0 25689999999
Q ss_pred HHHHhcCCC
Q psy818 200 VEFILSSPP 208 (214)
Q Consensus 200 v~fl~s~p~ 208 (214)
++++++.+.
T Consensus 234 ~~~~~~~~~ 242 (322)
T 2p4h_X 234 HIYLLENSV 242 (322)
T ss_dssp HHHHHHSCC
T ss_pred HHHHhhCcC
Confidence 999998653
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0026 Score=51.93 Aligned_cols=121 Identities=12% Similarity=0.084 Sum_probs=72.1
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-CCCCCCcC----------------------
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-PTLGSIEM---------------------- 129 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-v~i~S~a~---------------------- 129 (214)
.+.++|..|..... ...++|...+++| .+++++.+.+.... +++||.+.
T Consensus 74 ~d~vih~A~~~~~~---~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~ 150 (347)
T 1orr_A 74 PDSCFHLAGQVAMT---TSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP 150 (347)
T ss_dssp CSEEEECCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT
T ss_pred CCEEEECCcccChh---hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccc
Confidence 35577755432111 1124577777777 55677766654322 55555431
Q ss_pred ------------cHHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCc----hhhHhHHhhC-----
Q psy818 130 ------------SDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD----KFDKSLYEAH----- 188 (214)
Q Consensus 130 ------------~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~----~~~~~~~~~~----- 188 (214)
..|+++|++.+.+.+.++ .+. +.+++.+.||.+.++........ ..........
T Consensus 151 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~-gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (347)
T 1orr_A 151 NGYDESTQLDFHSPYGCSKGAADQYMLDYA----RIF-GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINK 225 (347)
T ss_dssp TCBCTTSCCCCCHHHHHHHHHHHHHHHHHH----HHH-CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCC
T ss_pred cCccccCCCCCCCchHHHHHHHHHHHHHHH----HHh-CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCC
Confidence 179999999999999987 443 45788899998877653211100 0111111111
Q ss_pred ------------CCCChHhHHHHHHHHhcC
Q psy818 189 ------------PCLQAEDIANTVEFILSS 206 (214)
Q Consensus 189 ------------~~~~pedvA~~v~fl~s~ 206 (214)
.++.++|+|++++++++.
T Consensus 226 ~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 255 (347)
T 1orr_A 226 PFTISGNGKQVRDVLHAEDMISLYFTALAN 255 (347)
T ss_dssp CEEEESSSCCEEECEEHHHHHHHHHHHHHT
T ss_pred CeEEecCCcceEeeEEHHHHHHHHHHHHhc
Confidence 144899999999999975
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0051 Score=46.98 Aligned_cols=74 Identities=16% Similarity=0.053 Sum_probs=48.8
Q ss_pred CCCCCCcCc--------------HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHHhh
Q psy818 122 PTLGSIEMS--------------DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEA 187 (214)
Q Consensus 122 v~i~S~a~~--------------~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~ 187 (214)
+++||..+. .|+++|++.+.+.+. -...+++.+.||.+.++....... .. ...
T Consensus 102 v~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~--------~~~i~~~ilrp~~v~g~~~~~~~~---~~--~~~ 168 (219)
T 3dqp_A 102 ILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTK--------ETNLDYTIIQPGALTEEEATGLID---IN--DEV 168 (219)
T ss_dssp EEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHH--------SCCCEEEEEEECSEECSCCCSEEE---ES--SSC
T ss_pred EEECcccccCCCcccccccccccHHHHHHHHHHHHHHh--------ccCCcEEEEeCceEecCCCCCccc---cC--CCc
Confidence 677777643 699999998887751 123377888888876553221110 00 112
Q ss_pred CCCCChHhHHHHHHHHhcCCC
Q psy818 188 HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 188 ~~~~~pedvA~~v~fl~s~p~ 208 (214)
..++.++|+|++++++++.+.
T Consensus 169 ~~~i~~~Dva~~i~~~l~~~~ 189 (219)
T 3dqp_A 169 SASNTIGDVADTIKELVMTDH 189 (219)
T ss_dssp CCCEEHHHHHHHHHHHHTCGG
T ss_pred CCcccHHHHHHHHHHHHhCcc
Confidence 235799999999999999874
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.0042 Score=50.51 Aligned_cols=121 Identities=12% Similarity=-0.025 Sum_probs=70.3
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC------------------cHH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM------------------SDY 132 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~------------------~~Y 132 (214)
.+.++|..|..... .+.++|...+++| .+++++.+. ...+ +++||.+. ..|
T Consensus 76 ~d~vih~A~~~~~~---~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y 151 (336)
T 2hun_A 76 VDGVVHLAAESHVD---RSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPY 151 (336)
T ss_dssp CSEEEECCCCCCHH---HHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHH
T ss_pred CCEEEECCCCcChh---hhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCcc
Confidence 35577754432111 1124677788888 445555554 2112 66666431 179
Q ss_pred HHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhcccc-CCchhhHhHHhh------------CCCCChHhHHHH
Q psy818 133 ERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSS-LGDKFDKSLYEA------------HPCLQAEDIANT 199 (214)
Q Consensus 133 ~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~-~~~~~~~~~~~~------------~~~~~pedvA~~ 199 (214)
+++|++.+.+.+.++ .+. +.+++.+.||.+.++..... ............ ..++.++|+|++
T Consensus 152 ~~sK~~~e~~~~~~~----~~~-~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 226 (336)
T 2hun_A 152 SATKAASDMLVLGWT----RTY-NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRA 226 (336)
T ss_dssp HHHHHHHHHHHHHHH----HHT-TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HHh-CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHH
Confidence 999999999999887 443 34788888888766543210 000001111111 113479999999
Q ss_pred HHHHhcCC
Q psy818 200 VEFILSSP 207 (214)
Q Consensus 200 v~fl~s~p 207 (214)
++++++.+
T Consensus 227 ~~~~~~~~ 234 (336)
T 2hun_A 227 IELVLLKG 234 (336)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhCC
Confidence 99998754
|
| >1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3 | Back alignment and structure |
|---|
Probab=95.49 E-value=0.093 Score=37.13 Aligned_cols=69 Identities=14% Similarity=0.026 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCC-----CcccEEEEEECCCC-C-CCCCcEEEEEEECCCCCCCCCCeEEEEc
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPA-----NILEWFYVVIGPEN-T-QYEGGMYLGKLVFPRDFPFKPPSIYMIT 77 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~~-t-~y~gg~f~~~i~fp~~YP~~pP~v~f~t 77 (214)
...+...|+..|+.-.+..+....... ....+.+.|. +.+ . .-..-.+.|.+.||++||..||.|.+..
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 455678899999886555554432111 1355666665 221 1 0012468999999999999999998754
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.0041 Score=50.24 Aligned_cols=121 Identities=12% Similarity=0.014 Sum_probs=69.6
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC--------------------c
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM--------------------S 130 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~--------------------~ 130 (214)
.+.++|..|..... ...++|...+++| .+++++ +.+...+ +++||.+. .
T Consensus 75 ~d~vih~A~~~~~~---~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~ 150 (321)
T 2pk3_A 75 PDYIFHLAAKSSVK---DSWLNKKGTFSTNVFGTLHVLDAV-RDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMS 150 (321)
T ss_dssp CSEEEECCSCCCHH---HHTTCHHHHHHHHHHHHHHHHHHH-HHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCS
T ss_pred CCEEEEcCcccchh---hhhhcHHHHHHHHHHHHHHHHHHH-HHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCC
Confidence 35567755432211 1235688888888 345555 4442122 66666531 1
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccC-CchhhHhHHh---h--------------CCCCC
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSL-GDKFDKSLYE---A--------------HPCLQ 192 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~-~~~~~~~~~~---~--------------~~~~~ 192 (214)
.|+++|++.+.+.+.++ .+. +.+++.+.||.+-++...... .......... . ..++.
T Consensus 151 ~Y~~sK~~~E~~~~~~~----~~~-gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~ 225 (321)
T 2pk3_A 151 PYGVSKASVGMLARQYV----KAY-GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTD 225 (321)
T ss_dssp HHHHHHHHHHHHHHHHH----HHH-CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEE
T ss_pred ccHHHHHHHHHHHHHHH----HHc-CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEE
Confidence 79999999999999887 332 347777888776555332100 0000111111 1 11358
Q ss_pred hHhHHHHHHHHhcCC
Q psy818 193 AEDIANTVEFILSSP 207 (214)
Q Consensus 193 pedvA~~v~fl~s~p 207 (214)
++|+|++++++++.+
T Consensus 226 v~Dva~a~~~~~~~~ 240 (321)
T 2pk3_A 226 VRDIVQAYWLLSQYG 240 (321)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999765
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=95.33 E-value=0.0057 Score=49.30 Aligned_cols=121 Identities=10% Similarity=0.026 Sum_probs=52.9
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC---CCCCCCcC-----------------cHHHHHH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS---PTLGSIEM-----------------SDYERRQ 136 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~---v~i~S~a~-----------------~~Y~a~K 136 (214)
.+.++|..|.... +...++|...+++| ..+..++..+.+.+ +++||.+. ..|+++|
T Consensus 61 ~d~vih~A~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK 137 (315)
T 2ydy_A 61 PHVIVHCAAERRP---DVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTK 137 (315)
T ss_dssp CSEEEECC----------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHH
T ss_pred CCEEEECCcccCh---hhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHH
Confidence 4567786543221 12346788888888 22222332222222 55666541 2799999
Q ss_pred HHHHHHHhhccCcchhhhCcccccccCccchhh---hhccccC------CchhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 137 LAARSLRFNLNDKNFCELFPDLVQSISPGLVKS---QIFKSSL------GDKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t---~~~~~~~------~~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
++.+.+.+.++ .++.-.|++.|. |...+ .+..... +............++.++|+|++++++++.
T Consensus 138 ~~~e~~~~~~~----~~~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 211 (315)
T 2ydy_A 138 LDGEKAVLENN----LGAAVLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEK 211 (315)
T ss_dssp HHHHHHHHHHC----TTCEEEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC----CCeEEEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHh
Confidence 99999998876 333333555554 43333 1111000 000000000112356899999999999864
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.30 E-value=0.002 Score=52.51 Aligned_cols=66 Identities=17% Similarity=0.040 Sum_probs=43.5
Q ss_pred CcCcccHH-HHHHHHHHhhccCC----CCCCCCcC------------------cHHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 100 WNPAWSVS-TILTGLLSFMVERS----PTLGSIEM------------------SDYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 100 w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~------------------~~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
+...+++| ..+..++..|.+.+ +++||.+. ..|+++|++.+.+.+.++ .+..+
T Consensus 98 ~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~ 173 (341)
T 3enk_A 98 PIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVE----AADPS 173 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHH----HHCTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHh----hcCCC
Confidence 33455666 33555666666554 67777543 279999999999999887 45443
Q ss_pred ccccccCccchhh
Q psy818 157 DLVQSISPGLVKS 169 (214)
Q Consensus 157 ~~vn~v~pg~~~t 169 (214)
.++..+.|+.+-.
T Consensus 174 ~~~~~lRp~~v~G 186 (341)
T 3enk_A 174 WRVATLRYFNPVG 186 (341)
T ss_dssp CEEEEEEECEEEC
T ss_pred ceEEEEeeccccC
Confidence 5677777766543
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.0098 Score=48.39 Aligned_cols=72 Identities=18% Similarity=0.214 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhH---------hHH---hhCCCCChHhHHH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDK---------SLY---EAHPCLQAEDIAN 198 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~---------~~~---~~~~~~~pedvA~ 198 (214)
.|+++|++.+.+.+.++ .+ .+.+++.+.|+.+.++............ ... ....++.++|||+
T Consensus 162 ~Y~~sK~~~E~~~~~~~----~~-~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~ 236 (337)
T 2c29_D 162 MYFVSKTLAEQAAWKYA----KE-NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCN 236 (337)
T ss_dssp HHHHHHHHHHHHHHHHH----HH-HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH----HH-cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHH
Confidence 59999999888876654 22 2347888888887666432211110000 000 0112569999999
Q ss_pred HHHHHhcCC
Q psy818 199 TVEFILSSP 207 (214)
Q Consensus 199 ~v~fl~s~p 207 (214)
+++++++.+
T Consensus 237 a~~~~~~~~ 245 (337)
T 2c29_D 237 AHIYLFENP 245 (337)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHhcCc
Confidence 999999765
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.028 Score=47.45 Aligned_cols=119 Identities=9% Similarity=-0.035 Sum_probs=65.5
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC---CCCCCCcC------------------------
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS---PTLGSIEM------------------------ 129 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~---v~i~S~a~------------------------ 129 (214)
.+.++|..|..- ..+.|...+++| ..++.++....+.. +++||...
T Consensus 151 ~d~Vih~A~~~~------~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~ 224 (427)
T 4f6c_A 151 MDTIIHAGARTD------HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLL 224 (427)
T ss_dssp CSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCC
T ss_pred CCEEEECCcccC------CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHhCCCccCCCCCccccccccccCCCC
Confidence 355677544321 125688888888 22333333332222 66776654
Q ss_pred -cHHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCc--------hhhHhHHh-----------hCC
Q psy818 130 -SDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD--------KFDKSLYE-----------AHP 189 (214)
Q Consensus 130 -~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~--------~~~~~~~~-----------~~~ 189 (214)
..|+++|++.+.+.+.++ . .+.+++.+.||.+-++........ ........ ...
T Consensus 225 ~~~Y~~sK~~~E~~~~~~~----~--~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (427)
T 4f6c_A 225 TSPYTRSKFYSELKVLEAV----N--NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVD 298 (427)
T ss_dssp CSHHHHHHHHHHHHHHHHH----H--TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEEC
T ss_pred CCchHHHHHHHHHHHHHHH----H--cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEE
Confidence 289999999999988865 2 234788888887755432211000 00011100 112
Q ss_pred CCChHhHHHHHHHHhcCCC
Q psy818 190 CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 190 ~~~pedvA~~v~fl~s~p~ 208 (214)
+...+|+|+++++++..+.
T Consensus 299 ~v~v~DvA~ai~~~~~~~~ 317 (427)
T 4f6c_A 299 FSFVDTTARQIVALAQVNT 317 (427)
T ss_dssp CEEHHHHHHHHHHHTTSCC
T ss_pred EeeHHHHHHHHHHHHcCCC
Confidence 4578999999999998764
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.0049 Score=51.44 Aligned_cols=35 Identities=9% Similarity=-0.085 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhh
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQ 170 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~ 170 (214)
.|+++|++...+.+.++ .+. +.+++.+.||.+-++
T Consensus 191 ~Y~~sK~~~e~~~~~~~----~~~-gi~~~ivrp~~v~Gp 225 (404)
T 1i24_A 191 FYHLSKVHDSHNIAFTC----KAW-GIRATDLNQGVVYGV 225 (404)
T ss_dssp HHHHHHHHHHHHHHHHH----HHH-CCEEEEEEECEEECS
T ss_pred hhHHHHHHHHHHHHHHH----Hhc-CCeEEEEecceeeCC
Confidence 69999999999988876 333 447888888877554
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.0016 Score=51.38 Aligned_cols=119 Identities=8% Similarity=-0.014 Sum_probs=62.3
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC---CCCCCCcC-----------------cHHHHHH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS---PTLGSIEM-----------------SDYERRQ 136 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~---v~i~S~a~-----------------~~Y~a~K 136 (214)
.+.++|..|..... ...++|+..+++| .....++..+.+.+ +++||.++ ..|+++|
T Consensus 58 ~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK 134 (273)
T 2ggs_A 58 PDVIINAAAMTDVD---KCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSK 134 (273)
T ss_dssp CSEEEECCCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHH
T ss_pred CCEEEECCcccChh---hhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHH
Confidence 45577755432111 1124677888888 22333333333333 56666542 3799999
Q ss_pred HHHHHHHhhccCcchhhhCcccccccCccchhhhhccccC----CchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 137 LAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSL----GDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 137 ~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~----~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
++++.+.+. . +..-.|++.|. | .+.+..... .............++.++|+|++++++++.+.
T Consensus 135 ~~~e~~~~~-~-----~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~ 201 (273)
T 2ggs_A 135 LLGETFALQ-D-----DSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRK 201 (273)
T ss_dssp HHHHHHHCC-T-----TCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhC-C-----CeEEEeccccc-c--ccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCc
Confidence 999998877 1 22223666655 4 222211000 00000000002235789999999999998654
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.024 Score=46.21 Aligned_cols=106 Identities=11% Similarity=0.045 Sum_probs=59.4
Q ss_pred CCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcC-------------------cHHHHHHHHHHHHHhhccCcchhh
Q psy818 98 DTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEM-------------------SDYERRQLAARSLRFNLNDKNFCE 153 (214)
Q Consensus 98 e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~-------------------~~Y~a~K~a~~~~~~~l~~~~~~e 153 (214)
+++...+++| ..+..++..+.+.+ +++||.+. ..|+.+|.+.+.+.+.++ .+
T Consensus 116 ~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~----~~ 191 (346)
T 4egb_A 116 ENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYY----KT 191 (346)
T ss_dssp ---CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHH----HH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHH----HH
Confidence 5677777887 33444444444433 55666431 279999999999988876 33
Q ss_pred hCcccccccCccchhhhhccccC-CchhhHhHHhhC------------CCCChHhHHHHHHHHhcCCC
Q psy818 154 LFPDLVQSISPGLVKSQIFKSSL-GDKFDKSLYEAH------------PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 154 ~~~~~vn~v~pg~~~t~~~~~~~-~~~~~~~~~~~~------------~~~~pedvA~~v~fl~s~p~ 208 (214)
. ..++..+.|+.+-.+...... ............ .++..+|+|+++++++..+.
T Consensus 192 ~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 258 (346)
T 4egb_A 192 Y-QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR 258 (346)
T ss_dssp H-CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred h-CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence 2 336677777766544221100 000011111111 13468999999999998764
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=94.88 E-value=0.0075 Score=48.52 Aligned_cols=72 Identities=14% Similarity=0.021 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCch----hhHhHHhh-----------------CC
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDK----FDKSLYEA-----------------HP 189 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~----~~~~~~~~-----------------~~ 189 (214)
.|+++|++...+.+.++ .+. +.+++.+.|+.+-++......... ........ ..
T Consensus 142 ~Y~~sK~~~e~~~~~~~----~~~-~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 216 (311)
T 2p5y_A 142 PYAASKAAFEHYLSVYG----QSY-GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRD 216 (311)
T ss_dssp HHHHHHHHHHHHHHHHH----HHH-CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEEC
T ss_pred hHHHHHHHHHHHHHHHH----HHc-CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEe
Confidence 79999999999998887 443 347788888877655322110000 00100000 11
Q ss_pred CCChHhHHHHHHHHhcCC
Q psy818 190 CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 190 ~~~pedvA~~v~fl~s~p 207 (214)
++.++|+|++++++++.+
T Consensus 217 ~i~v~Dva~a~~~~~~~~ 234 (311)
T 2p5y_A 217 YVYVGDVAEAHALALFSL 234 (311)
T ss_dssp EEEHHHHHHHHHHHHHHC
T ss_pred eEEHHHHHHHHHHHHhCC
Confidence 347899999999998764
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.02 Score=43.26 Aligned_cols=97 Identities=20% Similarity=0.137 Sum_probs=55.4
Q ss_pred HHHHHHHHhhccCC----CCCCCCcCc-------------------HHHHHHHHHHHHHhhccCcchhhhCcccccccCc
Q psy818 108 TILTGLLSFMVERS----PTLGSIEMS-------------------DYERRQLAARSLRFNLNDKNFCELFPDLVQSISP 164 (214)
Q Consensus 108 ~~l~a~~~~m~~~~----v~i~S~a~~-------------------~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~p 164 (214)
..++.+++.+++.+ +++||..+. .|+.+|++...+.. ++ .+-.+.+++.+.|
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~-~~----~~~~gi~~~ivrp 155 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEH-LK----SHQAEFSWTYISP 155 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHH-HH----TTTTTSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHH-HH----hhccCccEEEEeC
Confidence 55677888887764 677877642 37788888877632 22 1122347788889
Q ss_pred cchhhhhcccc-C--CchhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 165 GLVKSQIFKSS-L--GDKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 165 g~~~t~~~~~~-~--~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
|.+.++..... . .............++.++|||++++.++..|..
T Consensus 156 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~ 203 (221)
T 3ew7_A 156 SAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNH 203 (221)
T ss_dssp SSCCCCC---------------------CCCHHHHHHHHHHHHHSCSC
T ss_pred cceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCccc
Confidence 88765411100 0 000000000112367999999999999998864
|
| >2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.58 E-value=0.043 Score=38.53 Aligned_cols=67 Identities=7% Similarity=-0.092 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhcCCCC--CeEEee-cCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEc
Q psy818 10 ARLKQDYMKLKKDPIP--YVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMIT 77 (214)
Q Consensus 10 ~rl~~e~~~l~~~~~~--~~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 77 (214)
.....|+..|+.-.+. .+.... ...+...+.+.|...... =..-.+.|.+.||++||..||.|.+.+
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 3467788888774332 332211 112345777777632211 112479999999999999999986553
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.013 Score=48.10 Aligned_cols=73 Identities=10% Similarity=-0.014 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccc-----cCCchhhHhH------------Hh-hCCCCC
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKS-----SLGDKFDKSL------------YE-AHPCLQ 192 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~-----~~~~~~~~~~------------~~-~~~~~~ 192 (214)
.|+++|++.+.+.+.++ .+. +.+++.+.||.+-++.... .......... .. ...++.
T Consensus 186 ~Y~~sK~~~E~~~~~~~----~~~-g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 260 (357)
T 2x6t_A 186 VFGYSKFLFDEYVRQIL----PEA-NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY 260 (357)
T ss_dssp HHHHHHHHHHHHHHHHG----GGC-SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEE
T ss_pred hhHHHHHHHHHHHHHHH----HHc-CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEE
Confidence 79999999999999887 332 3466777777665432110 0000000000 01 112468
Q ss_pred hHhHHHHHHHHhcCCC
Q psy818 193 AEDIANTVEFILSSPP 208 (214)
Q Consensus 193 pedvA~~v~fl~s~p~ 208 (214)
++|+|+++++++..+.
T Consensus 261 v~Dva~ai~~~~~~~~ 276 (357)
T 2x6t_A 261 VGDVADVNLWFLENGV 276 (357)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 8999999999997654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=94.17 E-value=0.0045 Score=50.45 Aligned_cols=72 Identities=14% Similarity=0.073 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCccc-ccccCccchhhhhccccC-----CchhhHhHHhhCCCCChHhHHH-HHHHH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDL-VQSISPGLVKSQIFKSSL-----GDKFDKSLYEAHPCLQAEDIAN-TVEFI 203 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~-vn~v~pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~pedvA~-~v~fl 203 (214)
.|+++|+++..+.+.+. ....-.| ++.+.||. .+.+..... +........ ...++.++|+|+ +++++
T Consensus 159 ~Y~~sK~~~e~~~~~~~----~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~~~~ 232 (330)
T 2pzm_A 159 SYGISKTAGEAFLMMSD----VPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIADLSL 232 (330)
T ss_dssp HHHHHHHHHHHHHHTCS----SCEEEEEECEEECTTC-CSSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHcC----CCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHHHHH
Confidence 79999999999998872 2222234 56677774 232211100 000000000 123568999999 99999
Q ss_pred hcCCC
Q psy818 204 LSSPP 208 (214)
Q Consensus 204 ~s~p~ 208 (214)
++.+.
T Consensus 233 ~~~~~ 237 (330)
T 2pzm_A 233 QEGRP 237 (330)
T ss_dssp STTCC
T ss_pred hhcCC
Confidence 98753
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=93.91 E-value=0.018 Score=46.76 Aligned_cols=122 Identities=10% Similarity=-0.000 Sum_probs=66.7
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCCCCCCCCc------------------CcHHHH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERSPTLGSIE------------------MSDYER 134 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~v~i~S~a------------------~~~Y~a 134 (214)
.+.++|..|..... .+.++|...+++| .+++++.+....+=+++||.+ ...|++
T Consensus 77 ~d~Vih~A~~~~~~---~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~ 153 (337)
T 1r6d_A 77 VDAIVHFAAESHVD---RSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAA 153 (337)
T ss_dssp CCEEEECCSCCCHH---HHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHH
T ss_pred CCEEEECCCccCch---hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHH
Confidence 35567754422111 1124577777887 344444443221115566542 127999
Q ss_pred HHHHHHHHHhhccCcchhhhCcccccccCccchhhhhcccc-CCchhhHhHHhh------------CCCCChHhHHHHHH
Q psy818 135 RQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSS-LGDKFDKSLYEA------------HPCLQAEDIANTVE 201 (214)
Q Consensus 135 ~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~-~~~~~~~~~~~~------------~~~~~pedvA~~v~ 201 (214)
+|++.+.+.+.++ .+. +.+++.+.||.+-++..... ............ ..++.++|+|++++
T Consensus 154 sK~~~e~~~~~~~----~~~-g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 228 (337)
T 1r6d_A 154 SKAGSDLVARAYH----RTY-GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA 228 (337)
T ss_dssp HHHHHHHHHHHHH----HHH-CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHH-CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHH
Confidence 9999999998876 333 34677778887655432110 000001111111 01347899999999
Q ss_pred HHhcCC
Q psy818 202 FILSSP 207 (214)
Q Consensus 202 fl~s~p 207 (214)
+++..+
T Consensus 229 ~~~~~~ 234 (337)
T 1r6d_A 229 LVLAGG 234 (337)
T ss_dssp HHHHHC
T ss_pred HHHhCC
Confidence 998754
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=93.32 E-value=0.026 Score=46.17 Aligned_cols=120 Identities=10% Similarity=0.047 Sum_probs=68.2
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC-------------------cH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM-------------------SD 131 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~-------------------~~ 131 (214)
.+.++|..|.... +.+.++|...+++| .+++++.. +...+ +++||.+. ..
T Consensus 81 ~d~vih~A~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~ 156 (357)
T 1rkx_A 81 PEIVFHMAAQPLV---RLSYSEPVETYSTNVMGTVYLLEAIRH-VGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDP 156 (357)
T ss_dssp CSEEEECCSCCCH---HHHHHCHHHHHHHHTHHHHHHHHHHHH-HCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSH
T ss_pred CCEEEECCCCccc---ccchhCHHHHHHHHHHHHHHHHHHHHH-hCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCc
Confidence 3557775542111 11124577777777 44555544 22122 66777541 17
Q ss_pred HHHHHHHHHHHHhhccCcchhhhC--------cccccccCccchhhhhccccCC--chhhHhHHh-----------hCCC
Q psy818 132 YERRQLAARSLRFNLNDKNFCELF--------PDLVQSISPGLVKSQIFKSSLG--DKFDKSLYE-----------AHPC 190 (214)
Q Consensus 132 Y~a~K~a~~~~~~~l~~~~~~e~~--------~~~vn~v~pg~~~t~~~~~~~~--~~~~~~~~~-----------~~~~ 190 (214)
|+++|++...+.+.++ .++. +.+++.+.||.+-++....... ......... ...+
T Consensus 157 Y~~sK~~~e~~~~~~~----~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 232 (357)
T 1rkx_A 157 YSNSKGCAELVTSSYR----NSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW 232 (357)
T ss_dssp HHHHHHHHHHHHHHHH----HHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred cHHHHHHHHHHHHHHH----HHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeecc
Confidence 9999999999999887 4542 3478888898876653211000 000111100 0124
Q ss_pred CChHhHHHHHHHHhc
Q psy818 191 LQAEDIANTVEFILS 205 (214)
Q Consensus 191 ~~pedvA~~v~fl~s 205 (214)
+..+|+|++++.++.
T Consensus 233 v~v~Dva~a~~~~~~ 247 (357)
T 1rkx_A 233 QHVLEPLSGYLLLAQ 247 (357)
T ss_dssp EETHHHHHHHHHHHH
T ss_pred EeHHHHHHHHHHHHH
Confidence 578999999999886
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=93.23 E-value=0.035 Score=45.20 Aligned_cols=67 Identities=15% Similarity=-0.000 Sum_probs=42.4
Q ss_pred CCCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcC--------------------cHHHHHHHHHHHHHhhccCcch
Q psy818 97 PDTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEM--------------------SDYERRQLAARSLRFNLNDKNF 151 (214)
Q Consensus 97 ~e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~--------------------~~Y~a~K~a~~~~~~~l~~~~~ 151 (214)
.+.|...+++| ..++.++..+.+.+ +++||.+. ..|+.+|.+.+.+.+.++
T Consensus 92 ~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~---- 167 (347)
T 4id9_A 92 PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQ---- 167 (347)
T ss_dssp GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH----
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHH----
Confidence 34567777777 33445555554444 56666321 179999999999988876
Q ss_pred hhhCcccccccCccchh
Q psy818 152 CELFPDLVQSISPGLVK 168 (214)
Q Consensus 152 ~e~~~~~vn~v~pg~~~ 168 (214)
.+ ...++..+.|+.+-
T Consensus 168 ~~-~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 168 RS-GAMETVILRFSHTQ 183 (347)
T ss_dssp HH-SSSEEEEEEECEEE
T ss_pred Hh-cCCceEEEccceEe
Confidence 33 23366667777654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=93.15 E-value=0.043 Score=44.87 Aligned_cols=104 Identities=8% Similarity=-0.061 Sum_probs=61.2
Q ss_pred CCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcC------------------cHHHHHHHHHHHHHhhccCcchhhh
Q psy818 98 DTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEM------------------SDYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 98 e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~------------------~~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
++|...+++| ..+..++..+.+.+ +++||.+. ..|+++|++.+.+.+.++ .+.
T Consensus 120 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~ 195 (352)
T 1sb8_A 120 NDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFS----RCY 195 (352)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHH----HHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHH----HHc
Confidence 4577777777 22333333333323 55666432 279999999999998887 443
Q ss_pred CcccccccCccchhhhhcccc--C-C--chhhHhHHhhC------------CCCChHhHHHHHHHHhcC
Q psy818 155 FPDLVQSISPGLVKSQIFKSS--L-G--DKFDKSLYEAH------------PCLQAEDIANTVEFILSS 206 (214)
Q Consensus 155 ~~~~vn~v~pg~~~t~~~~~~--~-~--~~~~~~~~~~~------------~~~~pedvA~~v~fl~s~ 206 (214)
+.+++.+.||.+-++..... . . ........... .++.++|+|+++++++..
T Consensus 196 -g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 263 (352)
T 1sb8_A 196 -GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA 263 (352)
T ss_dssp -CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred -CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence 34778888887766543211 0 0 00111111111 245799999999999876
|
| >2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3 | Back alignment and structure |
|---|
Probab=93.13 E-value=0.31 Score=35.14 Aligned_cols=25 Identities=20% Similarity=0.357 Sum_probs=22.0
Q ss_pred cEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 54 GMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 54 g~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
-.+.|.+.+|.+||..||.|.+...
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987764
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=92.97 E-value=0.14 Score=40.93 Aligned_cols=105 Identities=13% Similarity=0.094 Sum_probs=60.0
Q ss_pred CCcCcccHH-HHHHHHHHhhccCC----CCCCCCcC------------------cHHHHHHHHHHHHHhhccCcchhhhC
Q psy818 99 TWNPAWSVS-TILTGLLSFMVERS----PTLGSIEM------------------SDYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 99 ~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~------------------~~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
++...+++| ..++.++..+.+.+ +.+||.+. ..|+.+|.+.+.+.+.++ .+ .
T Consensus 77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~----~~-~ 151 (311)
T 3m2p_A 77 GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYS----RK-K 151 (311)
T ss_dssp SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHH----HH-S
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH----HH-c
Confidence 567778888 33455555554444 55666442 279999999999888876 32 2
Q ss_pred cccccccCccchhhhhcccc-CCchhhHhHHhhC------------CCCChHhHHHHHHHHhcCCC
Q psy818 156 PDLVQSISPGLVKSQIFKSS-LGDKFDKSLYEAH------------PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 156 ~~~vn~v~pg~~~t~~~~~~-~~~~~~~~~~~~~------------~~~~pedvA~~v~fl~s~p~ 208 (214)
+.++..+.|+.+-.+..... ............. .++..+|+|+++++++..+.
T Consensus 152 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~ 217 (311)
T 3m2p_A 152 GLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK 217 (311)
T ss_dssp CCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT
T ss_pred CCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC
Confidence 33566677766543321100 0000001110010 13478899999999998873
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=92.76 E-value=0.02 Score=45.36 Aligned_cols=118 Identities=6% Similarity=-0.019 Sum_probs=61.7
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC---CCCCCCcC------------------cHHHHH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS---PTLGSIEM------------------SDYERR 135 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~---v~i~S~a~------------------~~Y~a~ 135 (214)
.+.++|..|...... ..++|...+++| ..+..++..+.+.+ +++||.+. ..|+.+
T Consensus 57 ~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~s 133 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQ---AEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGAS 133 (287)
T ss_dssp CSEEEECCCCCCHHH---HTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHH
T ss_pred CCEEEECCcccChHH---HhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHH
Confidence 355677544322111 125677788888 33333333333333 55565431 279999
Q ss_pred HHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHH----------hhCCCCChHhHHHHHHHHhc
Q psy818 136 QLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLY----------EAHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 136 K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~----------~~~~~~~pedvA~~v~fl~s 205 (214)
|.+.+.+.+.++.+ +..+.|+.+-.+...... ........ ....++.++|+|+++++++.
T Consensus 134 K~~~E~~~~~~~~~---------~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 203 (287)
T 3sc6_A 134 KYAGEQFVKELHNK---------YFIVRTSWLYGKYGNNFV-KTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIH 203 (287)
T ss_dssp HHHHHHHHHHHCSS---------EEEEEECSEECSSSCCHH-HHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCC---------cEEEeeeeecCCCCCcHH-HHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHh
Confidence 99999999887631 233344433221110000 00000000 11124579999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
.+.
T Consensus 204 ~~~ 206 (287)
T 3sc6_A 204 TSL 206 (287)
T ss_dssp SCC
T ss_pred CCC
Confidence 875
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=92.74 E-value=0.0049 Score=49.12 Aligned_cols=71 Identities=13% Similarity=0.136 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHh---HH--hhCCCCChHhHHHHHHHHhc
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKS---LY--EAHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~---~~--~~~~~~~pedvA~~v~fl~s 205 (214)
.|+++|++.+.+.+.++. +..-.|+..+. |. .+.+............ .. ....++.++|+|++++++++
T Consensus 136 ~Y~~sK~~~E~~~~~~~~----~~~~lR~~~v~-G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 209 (292)
T 1vl0_A 136 AYGKTKLEGENFVKALNP----KYYIVRTAWLY-GD-GNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVID 209 (292)
T ss_dssp HHHHHHHHHHHHHHHHCS----SEEEEEECSEE-SS-SSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCC----CeEEEeeeeee-CC-CcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHh
Confidence 799999999999988762 22111333332 22 1111110000000000 00 01224579999999999997
Q ss_pred CC
Q psy818 206 SP 207 (214)
Q Consensus 206 ~p 207 (214)
.+
T Consensus 210 ~~ 211 (292)
T 1vl0_A 210 EK 211 (292)
T ss_dssp HT
T ss_pred cC
Confidence 65
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=92.61 E-value=0.067 Score=39.77 Aligned_cols=92 Identities=7% Similarity=-0.006 Sum_probs=52.1
Q ss_pred cHH-HHHHHHHHhhccCC----CCCCCCcC-----------cHHHHHHHHHHHHHhhccCcchhhhCcccccccCccch-
Q psy818 105 SVS-TILTGLLSFMVERS----PTLGSIEM-----------SDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLV- 167 (214)
Q Consensus 105 ~vn-~~l~a~~~~m~~~~----v~i~S~a~-----------~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~- 167 (214)
++| ...+.++..+.+.+ +++||... ..|+++|+++..+.+. .+.+++.+.||.+
T Consensus 85 ~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~---------~~i~~~~lrp~~~~ 155 (206)
T 1hdo_A 85 TVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE---------SGLKYVAVMPPHIG 155 (206)
T ss_dssp CHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH---------TCSEEEEECCSEEE
T ss_pred chHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHh---------CCCCEEEEeCCccc
Confidence 355 23444444444433 56677643 1699999999887643 1236677777776
Q ss_pred hhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 168 KSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 168 ~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
.++.... .... .... ....++.++|+|++++++++.+.
T Consensus 156 ~~~~~~~-~~~~-~~~~-~~~~~i~~~Dva~~~~~~~~~~~ 193 (206)
T 1hdo_A 156 DQPLTGA-YTVT-LDGR-GPSRVISKHDLGHFMLRCLTTDE 193 (206)
T ss_dssp CCCCCSC-CEEE-SSSC-SSCSEEEHHHHHHHHHHTTSCST
T ss_pred CCCCCcc-eEec-ccCC-CCCCccCHHHHHHHHHHHhcCcc
Confidence 2221111 0000 0000 00245689999999999998874
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=92.60 E-value=0.04 Score=43.95 Aligned_cols=73 Identities=11% Similarity=0.029 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccc-----cCCchhhHh--------HH----h-hCCCCC
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKS-----SLGDKFDKS--------LY----E-AHPCLQ 192 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~-----~~~~~~~~~--------~~----~-~~~~~~ 192 (214)
.|+.+|.+.+.+.+.++ .+ .+.+++.+.||.+-.+.... ......... .. . ...+..
T Consensus 139 ~Y~~sK~~~e~~~~~~~----~~-~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~ 213 (310)
T 1eq2_A 139 VYGYSKFLFDEYVRQIL----PE-ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY 213 (310)
T ss_dssp HHHHHHHHHHHHHHHHG----GG-CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEE
T ss_pred hhHHHHHHHHHHHHHHH----HH-cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEE
Confidence 79999999999998886 33 23467777777664432210 000000000 00 0 112357
Q ss_pred hHhHHHHHHHHhcCCC
Q psy818 193 AEDIANTVEFILSSPP 208 (214)
Q Consensus 193 pedvA~~v~fl~s~p~ 208 (214)
.+|+|+++++++..+.
T Consensus 214 v~Dva~~~~~~~~~~~ 229 (310)
T 1eq2_A 214 VGDVADVNLWFLENGV 229 (310)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 8999999999997653
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=92.10 E-value=0.053 Score=48.57 Aligned_cols=73 Identities=8% Similarity=-0.039 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhcccc----C--C---chhhHhHHhhC------------C
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSS----L--G---DKFDKSLYEAH------------P 189 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~----~--~---~~~~~~~~~~~------------~ 189 (214)
.|+++|.+.+.+.+.++ .+. +.+++.+.||.+-++..... . . ........... .
T Consensus 462 ~Y~~sK~~~E~~~~~~~----~~~-gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~ 536 (660)
T 1z7e_A 462 IYSVSKQLLDRVIWAYG----EKE-GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC 536 (660)
T ss_dssp HHHHHHHHHHHHHHHHH----HHH-CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEE
T ss_pred CcHHHHHHHHHHHHHHH----HHc-CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEE
Confidence 59999999999988876 332 34777888887755432100 0 0 00111111111 1
Q ss_pred CCChHhHHHHHHHHhcCCC
Q psy818 190 CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 190 ~~~pedvA~~v~fl~s~p~ 208 (214)
++.++|+|++++++++.+.
T Consensus 537 ~i~v~Dva~ai~~~l~~~~ 555 (660)
T 1z7e_A 537 FTDIRDGIEALYRIIENAG 555 (660)
T ss_dssp CEEHHHHHHHHHHHHHCGG
T ss_pred EEEHHHHHHHHHHHHhCcc
Confidence 4579999999999998753
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=91.96 E-value=0.087 Score=43.60 Aligned_cols=72 Identities=11% Similarity=-0.018 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCC-----chhhHhHHhh-------------CCCCC
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLG-----DKFDKSLYEA-------------HPCLQ 192 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~-----~~~~~~~~~~-------------~~~~~ 192 (214)
.|+.+|++.+.+.+.++ .+. +.+++.+.||.+-++....... .......... ..++.
T Consensus 175 ~Y~~sK~~~E~~~~~~~----~~~-gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 249 (379)
T 2c5a_A 175 AFGLEKLATEELCKHYN----KDF-GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTF 249 (379)
T ss_dssp HHHHHHHHHHHHHHHHH----HHH-CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEE
T ss_pred hhHHHHHHHHHHHHHHH----HHH-CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEE
Confidence 79999999999998876 332 3477888888776553221000 0011111111 12456
Q ss_pred hHhHHHHHHHHhcCC
Q psy818 193 AEDIANTVEFILSSP 207 (214)
Q Consensus 193 pedvA~~v~fl~s~p 207 (214)
++|+|+++++++..+
T Consensus 250 v~Dva~ai~~~l~~~ 264 (379)
T 2c5a_A 250 IDECVEGVLRLTKSD 264 (379)
T ss_dssp HHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999999875
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=91.89 E-value=0.059 Score=43.83 Aligned_cols=73 Identities=11% Similarity=0.038 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCC---chhhHhHHhh------------CCCCChHh
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLG---DKFDKSLYEA------------HPCLQAED 195 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~---~~~~~~~~~~------------~~~~~ped 195 (214)
.|+++|++.+.+.+.++ .+. ..+++.+.||.+-.+....... .......... ..++..+|
T Consensus 169 ~Y~~sK~~~E~~~~~~~----~~~-~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 243 (343)
T 2b69_A 169 CYDEGKRVAETMCYAYM----KQE-GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSD 243 (343)
T ss_dssp HHHHHHHHHHHHHHHHH----HHH-CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHH
T ss_pred chHHHHHHHHHHHHHHH----HHh-CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHH
Confidence 59999999999988876 332 3366777777665443211000 0001111111 11458999
Q ss_pred HHHHHHHHhcCCC
Q psy818 196 IANTVEFILSSPP 208 (214)
Q Consensus 196 vA~~v~fl~s~p~ 208 (214)
+|+++++++..+.
T Consensus 244 va~a~~~~~~~~~ 256 (343)
T 2b69_A 244 LVNGLVALMNSNV 256 (343)
T ss_dssp HHHHHHHHHTSSC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999997653
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=91.27 E-value=0.047 Score=45.88 Aligned_cols=49 Identities=8% Similarity=-0.157 Sum_probs=39.7
Q ss_pred CCCCCCcCc---------HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccc
Q psy818 122 PTLGSIEMS---------DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKS 174 (214)
Q Consensus 122 v~i~S~a~~---------~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~ 174 (214)
+..+++.+. .++++|+++++.++.|+ .++++.++|.+++|.+.|.....
T Consensus 230 va~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La----~eL~~~~a~v~v~~a~vT~Assa 287 (401)
T 4ggo_A 230 LAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLN----KENPSIRAFVSVNKGLVTRASAV 287 (401)
T ss_dssp EEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHH----HHCTTEEEEEEECCCCCCTTGGG
T ss_pred EEEeccCcceeecCCCccHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcCccccchhhc
Confidence 555665543 46899999999999999 88889999999999998875543
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=91.22 E-value=0.37 Score=39.54 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=65.1
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC-----CCCCCCcCc---HHHHHHHHHHHHHhhccC
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS-----PTLGSIEMS---DYERRQLAARSLRFNLND 148 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~-----v~i~S~a~~---~Y~a~K~a~~~~~~~l~~ 148 (214)
.+.++|..|... .+++...+++| ..++.++..+++.+ +.+||.... .|+.+|.+.+.+.+.++
T Consensus 47 ~d~Vih~a~~~~-------~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~~~Y~~sK~~~E~~~~~~~- 118 (369)
T 3st7_A 47 ADFIVHLAGVNR-------PEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYA- 118 (369)
T ss_dssp CSEEEECCCSBC-------TTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSCSHHHHHHHHHHHHHHHHH-
T ss_pred CCEEEECCcCCC-------CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCCCCchHHHHHHHHHHHHHH-
Confidence 355677544221 23455566666 23344444444443 556776643 89999999999888876
Q ss_pred cchhhhCcccccccCccchhhhhccccCC---chhhHhHHhhC-----------CCCChHhHHHHHHHHhcCCCc
Q psy818 149 KNFCELFPDLVQSISPGLVKSQIFKSSLG---DKFDKSLYEAH-----------PCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 149 ~~~~e~~~~~vn~v~pg~~~t~~~~~~~~---~~~~~~~~~~~-----------~~~~pedvA~~v~fl~s~p~~ 209 (214)
.+. +.++..+.|+.+-.+....... ........... .++.++|+|++++.++..+..
T Consensus 119 ---~~~-g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 189 (369)
T 3st7_A 119 ---EEY-GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT 189 (369)
T ss_dssp ---HHH-CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC
T ss_pred ---HHh-CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc
Confidence 332 2345556666543322111000 00001111111 134699999999999988754
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=90.81 E-value=0.093 Score=41.60 Aligned_cols=117 Identities=10% Similarity=-0.038 Sum_probs=64.0
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC---CCCCCCcC------------------cHHHHH
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS---PTLGSIEM------------------SDYERR 135 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~---v~i~S~a~------------------~~Y~a~ 135 (214)
.+.++|..|..... ...++|...+++| ..++.++..+.+.+ +++||.+. ..|+.+
T Consensus 55 ~d~vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~s 131 (299)
T 1n2s_A 55 PDVIVNAAAHTAVD---KAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKT 131 (299)
T ss_dssp CSEEEECCCCCCHH---HHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHH
T ss_pred CCEEEECcccCCHh---hhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHH
Confidence 35567754422111 1125677777777 34455555555444 55565431 279999
Q ss_pred HHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHhHHh----------hCCCCChHhHHHHHHHHhc
Q psy818 136 QLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYE----------AHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 136 K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~----------~~~~~~pedvA~~v~fl~s 205 (214)
|++.+.+.+.++ . +++.+.|+.+-.+...... ......... ...+..++|+|+++++++.
T Consensus 132 K~~~E~~~~~~~----~-----~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 201 (299)
T 1n2s_A 132 KLAGEKALQDNC----P-----KHLIFRTSWVYAGKGNNFA-KTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIR 201 (299)
T ss_dssp HHHHHHHHHHHC----S-----SEEEEEECSEECSSSCCHH-HHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC----C-----CeEEEeeeeecCCCcCcHH-HHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHH
Confidence 999999888776 2 4555666655433211000 000010000 0123469999999999997
Q ss_pred CC
Q psy818 206 SP 207 (214)
Q Consensus 206 ~p 207 (214)
.+
T Consensus 202 ~~ 203 (299)
T 1n2s_A 202 VA 203 (299)
T ss_dssp HH
T ss_pred Hh
Confidence 64
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=90.68 E-value=0.11 Score=42.12 Aligned_cols=19 Identities=11% Similarity=0.071 Sum_probs=16.5
Q ss_pred CCChHhHHHHHHHHhcCCC
Q psy818 190 CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 190 ~~~pedvA~~v~fl~s~p~ 208 (214)
++.++|+|++++++++.+.
T Consensus 221 ~i~v~Dva~ai~~~~~~~~ 239 (333)
T 2q1w_A 221 FVFVKDLARATVRAVDGVG 239 (333)
T ss_dssp EEEHHHHHHHHHHHHTTCC
T ss_pred eEEHHHHHHHHHHHHhcCC
Confidence 5689999999999998764
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=90.55 E-value=0.079 Score=43.13 Aligned_cols=103 Identities=7% Similarity=-0.087 Sum_probs=58.0
Q ss_pred CCcCcccHH-HHHHHHHHhhccCC----CCCCCCcC------------------cHHHHHHHHHHHHHhhccCcchhhhC
Q psy818 99 TWNPAWSVS-TILTGLLSFMVERS----PTLGSIEM------------------SDYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 99 ~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~------------------~~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
++...+++| ..+..++..+.+.+ +.+||.+. ..|+.+|.+.+.+.+.++ .+.
T Consensus 119 ~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~----~~~- 193 (351)
T 3ruf_A 119 DPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYA----RTY- 193 (351)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHH----HHH-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHH----HHh-
Confidence 455566777 33444444444433 56666542 279999999999988876 332
Q ss_pred cccccccCccchhhhhccccCC-----chhhHhHHhhC------------CCCChHhHHHHHHHHhcC
Q psy818 156 PDLVQSISPGLVKSQIFKSSLG-----DKFDKSLYEAH------------PCLQAEDIANTVEFILSS 206 (214)
Q Consensus 156 ~~~vn~v~pg~~~t~~~~~~~~-----~~~~~~~~~~~------------~~~~pedvA~~v~fl~s~ 206 (214)
+.++..+.|+.+-.+....... ........... .++..+|+|+++++++..
T Consensus 194 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 261 (351)
T 3ruf_A 194 GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA 261 (351)
T ss_dssp CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence 3356667777654432211000 00111111111 134699999999999876
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=90.49 E-value=0.028 Score=45.59 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchh------h---HhHHh--------hC--CCCC
Q psy818 132 YERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKF------D---KSLYE--------AH--PCLQ 192 (214)
Q Consensus 132 Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~------~---~~~~~--------~~--~~~~ 192 (214)
|+++|++.+.+.+.++ .+ .+.+++.+.|+.+.++.......... . ..... .. .++.
T Consensus 168 Y~~sK~~~E~~~~~~~----~~-~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~ 242 (338)
T 2rh8_A 168 YPASKTLAEKAAWKFA----EE-NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAH 242 (338)
T ss_dssp CTTSCCHHHHHHHHHH----HH-HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHHHHHHHHHHHHHH----HH-cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEE
Confidence 8888887777666554 22 23478888888876664322111100 0 00000 00 3579
Q ss_pred hHhHHHHHHHHhcCC
Q psy818 193 AEDIANTVEFILSSP 207 (214)
Q Consensus 193 pedvA~~v~fl~s~p 207 (214)
++|||++++++++.+
T Consensus 243 v~Dva~a~~~~~~~~ 257 (338)
T 2rh8_A 243 VEDVCRAHIFVAEKE 257 (338)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999765
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=90.41 E-value=0.037 Score=45.75 Aligned_cols=107 Identities=20% Similarity=0.143 Sum_probs=59.5
Q ss_pred CCCcCcccHH-----HHHHHHHHhhcc---C-C-CCCCCCcC-----------------cHHHHHHHHHHHHHhhccCcc
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVE---R-S-PTLGSIEM-----------------SDYERRQLAARSLRFNLNDKN 150 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~---~-~-v~i~S~a~-----------------~~Y~a~K~a~~~~~~~l~~~~ 150 (214)
++|...+++| .+++++.+.+.+ . . +++||.+. ..|+++|++.+.+.+.++
T Consensus 124 ~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~--- 200 (381)
T 1n7h_A 124 EIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYR--- 200 (381)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH---
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH---
Confidence 3566677777 566777766544 1 2 66666541 279999999999988876
Q ss_pred hhhhC----cc-cccccCccchhhhh---ccccC-----Cchh---hHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 151 FCELF----PD-LVQSISPGLVKSQI---FKSSL-----GDKF---DKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 151 ~~e~~----~~-~vn~v~pg~~~t~~---~~~~~-----~~~~---~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
.+.. .. .++.+.||...+.. ..... +... .........++.++|||++++++++.+.
T Consensus 201 -~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~ 273 (381)
T 1n7h_A 201 -EAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK 273 (381)
T ss_dssp -HHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS
T ss_pred -HHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence 3321 11 34555665432210 00000 0000 0000001124689999999999998764
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=90.31 E-value=0.13 Score=41.04 Aligned_cols=74 Identities=9% Similarity=-0.018 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcc-cccccCccchhhhhcccc-CCchhhHhHHhh------------CCCCChHhH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPD-LVQSISPGLVKSQIFKSS-LGDKFDKSLYEA------------HPCLQAEDI 196 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~-~vn~v~pg~~~t~~~~~~-~~~~~~~~~~~~------------~~~~~pedv 196 (214)
.|+.+|.+.+.+.+.++ .+ .+. ++..+.|+.+-.+..... ............ ..++..+|+
T Consensus 142 ~Y~~sK~~~E~~~~~~~----~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv 216 (321)
T 3vps_A 142 PYAASKVGLEMVAGAHQ----RA-SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDV 216 (321)
T ss_dssp HHHHHHHHHHHHHHHHH----HS-SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHH
T ss_pred hhHHHHHHHHHHHHHHH----HH-cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHH
Confidence 79999999999988876 32 233 556666766543321110 000000111111 113479999
Q ss_pred HHHHHHHhcCCCc
Q psy818 197 ANTVEFILSSPPH 209 (214)
Q Consensus 197 A~~v~fl~s~p~~ 209 (214)
|+++++++..+..
T Consensus 217 a~~~~~~~~~~~~ 229 (321)
T 3vps_A 217 VDKLVALANRPLP 229 (321)
T ss_dssp HHHHHHGGGSCCC
T ss_pred HHHHHHHHhcCCC
Confidence 9999999988753
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=90.21 E-value=0.14 Score=41.34 Aligned_cols=72 Identities=10% Similarity=-0.025 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccC----C-c----hhhHhHHhh------------CC
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSL----G-D----KFDKSLYEA------------HP 189 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~----~-~----~~~~~~~~~------------~~ 189 (214)
.|+++|++.+.+.+.++ .+. +.+++.+.||.+-.+...... . . ......... ..
T Consensus 147 ~Y~~sK~~~e~~~~~~~----~~~-~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 221 (345)
T 2bll_A 147 IYSVSKQLLDRVIWAYG----EKE-GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC 221 (345)
T ss_dssp HHHHHHHHHHHHHHHHH----HHH-CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred ccHHHHHHHHHHHHHHH----Hhc-CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEE
Confidence 69999999999988876 332 346677777776443221000 0 0 000011111 11
Q ss_pred CCChHhHHHHHHHHhcCC
Q psy818 190 CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 190 ~~~pedvA~~v~fl~s~p 207 (214)
++.++|+|+++++++..+
T Consensus 222 ~i~v~Dva~a~~~~~~~~ 239 (345)
T 2bll_A 222 FTDIRDGIEALYRIIENA 239 (345)
T ss_dssp CEEHHHHHHHHHHHHHCG
T ss_pred EEEHHHHHHHHHHHHhhc
Confidence 458999999999999865
|
| >3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.43 E-value=2.2 Score=31.84 Aligned_cols=83 Identities=18% Similarity=0.231 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCCCcee
Q psy818 10 ARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTNTRLC 89 (214)
Q Consensus 10 ~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ng~ic 89 (214)
++|.+|+.++==+. +.-.+.++....+.+..- .|....++|.++.+||.+||.+...-|. .++
T Consensus 4 ~~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~-~~~------ 66 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK-----LVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV-PFC------ 66 (186)
T ss_dssp CSHHHHHHHHCGGG-----EEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS-CCC------
T ss_pred HHHHHHHHHhCCce-----eeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC-Ccc------
Confidence 36788888882211 122356788888888843 4788999999999999999988776661 111
Q ss_pred eecCCCCCCCCcCcccHHHHHHHHHHhh
Q psy818 90 LSMSDFHPDTWNPAWSVSTILTGLLSFM 117 (214)
Q Consensus 90 ~~~l~~~~e~w~~~~~vn~~l~a~~~~m 117 (214)
-.|.+.-++..+++.+...+
T Consensus 67 --------~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 67 --------ASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp --------CCCCTTCCHHHHHHHHHHHH
T ss_pred --------cccCCCccHHHHHHHHHHHH
Confidence 35887777776666555544
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.95 E-value=0.062 Score=42.72 Aligned_cols=105 Identities=10% Similarity=-0.022 Sum_probs=58.6
Q ss_pred CCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc-----------------------HHHHHHHHHHHHHhhccCc
Q psy818 98 DTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS-----------------------DYERRQLAARSLRFNLNDK 149 (214)
Q Consensus 98 e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~-----------------------~Y~a~K~a~~~~~~~l~~~ 149 (214)
+++...+++| ..++.++..+.+.+ +.+||.+.. .|+.+|.+.+.+.+.++
T Consensus 80 ~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~-- 157 (319)
T 4b8w_A 80 KYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYF-- 157 (319)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHH--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHH--
Confidence 4566667777 33444555554444 556776421 49999999998888776
Q ss_pred chhhhCcccccccCccchhhhhccccCC-----chhhHh----HHhhC------------CCCChHhHHHHHHHHhcCC
Q psy818 150 NFCELFPDLVQSISPGLVKSQIFKSSLG-----DKFDKS----LYEAH------------PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 150 ~~~e~~~~~vn~v~pg~~~t~~~~~~~~-----~~~~~~----~~~~~------------~~~~pedvA~~v~fl~s~p 207 (214)
.+. +.++..+.|+.+-.+....... ...... ..... .++..+|+|+++++++..+
T Consensus 158 --~~~-~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 233 (319)
T 4b8w_A 158 --QQY-GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREY 233 (319)
T ss_dssp --HHH-CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHC
T ss_pred --Hhh-CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcc
Confidence 332 3355666666554332210000 000111 11111 1347899999999999774
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=88.16 E-value=0.33 Score=39.27 Aligned_cols=72 Identities=8% Similarity=-0.049 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhcccc-CCchhhHhHHhh------------CCCCChHhHH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSS-LGDKFDKSLYEA------------HPCLQAEDIA 197 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~-~~~~~~~~~~~~------------~~~~~pedvA 197 (214)
.|+++|++.+.+.+.++ .+. +.+++.+.||.+-++..... ............ ..++.++|+|
T Consensus 160 ~Y~~sK~~~e~~~~~~~----~~~-gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 234 (348)
T 1oc2_A 160 PYSSTKAASDLIVKAWV----RSF-GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHS 234 (348)
T ss_dssp HHHHHHHHHHHHHHHHH----HHH-CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHH
T ss_pred ccHHHHHHHHHHHHHHH----HHh-CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHH
Confidence 79999999999999887 443 34778888888766543210 000011111111 1145799999
Q ss_pred HHHHHHhcCC
Q psy818 198 NTVEFILSSP 207 (214)
Q Consensus 198 ~~v~fl~s~p 207 (214)
++++++++.+
T Consensus 235 ~~~~~~~~~~ 244 (348)
T 1oc2_A 235 TGVWAILTKG 244 (348)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHhhCC
Confidence 9999999754
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=88.12 E-value=0.11 Score=41.96 Aligned_cols=108 Identities=8% Similarity=0.066 Sum_probs=57.4
Q ss_pred CCCcCcccHH-----HHHHHHHHhhcc---CC--CCCCCCcC------------------cHHHHHHHHHHHHHhhccCc
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVE---RS--PTLGSIEM------------------SDYERRQLAARSLRFNLNDK 149 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~---~~--v~i~S~a~------------------~~Y~a~K~a~~~~~~~l~~~ 149 (214)
++|...+++| .+++++.....+ .+ +++||.+. ..|+++|++.+.+.+.++.+
T Consensus 103 ~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 182 (342)
T 2hrz_A 103 LDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRR 182 (342)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 4677778877 445555543311 12 55555431 27999999999998887622
Q ss_pred chhhhCcccccccC--ccchhhhhccccCCchhhHhHHhh------------CCCCChHhHHHHHHHHhcCC
Q psy818 150 NFCELFPDLVQSIS--PGLVKSQIFKSSLGDKFDKSLYEA------------HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 150 ~~~e~~~~~vn~v~--pg~~~t~~~~~~~~~~~~~~~~~~------------~~~~~pedvA~~v~fl~s~p 207 (214)
.-....-.|++.+. ||...+.... .. .......... .....++|+|+++++++..+
T Consensus 183 ~~~~~~~ir~~~v~g~pg~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~ 252 (342)
T 2hrz_A 183 GFFDGIGIRLPTICIRPGKPNAAASG-FF-SNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMID 252 (342)
T ss_dssp TSCEEEEEEECEETTCCSSCCCSGGG-HH-HHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSC
T ss_pred cCCCceeEEeeeEEecCCCCcchhHH-HH-HHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhcc
Confidence 00011112566655 7754322100 00 0000000000 01347999999999998765
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=87.61 E-value=1 Score=38.69 Aligned_cols=119 Identities=9% Similarity=-0.034 Sum_probs=61.5
Q ss_pred CCceecCCCceeeecCCCCCCCCcCcccHH-HHHHHHHHhhccCC---CCCCCCcC------------------------
Q psy818 78 PNGRFKTNTRLCLSMSDFHPDTWNPAWSVS-TILTGLLSFMVERS---PTLGSIEM------------------------ 129 (214)
Q Consensus 78 ~~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-~~l~a~~~~m~~~~---v~i~S~a~------------------------ 129 (214)
.+.++|..|... ....|...+++| ..++.++....+.. +.+||.+.
T Consensus 232 ~D~Vih~Aa~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~ 305 (508)
T 4f6l_B 232 MDTIIHAGARTD------HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLL 305 (508)
T ss_dssp CSEEEECCCC--------------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCC
T ss_pred CCEEEECCceec------CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCccCCcCcccccccccccccC
Confidence 345667544321 124567777777 33444444443322 55555443
Q ss_pred -cHHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccC----Cchhh----HhHHh-----------hCC
Q psy818 130 -SDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSL----GDKFD----KSLYE-----------AHP 189 (214)
Q Consensus 130 -~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~----~~~~~----~~~~~-----------~~~ 189 (214)
..|+.+|++.+.+.+..+ . .+.+++.+.||.+-.+...... ..... ..... ...
T Consensus 306 ~~~Y~~sK~~~E~~~~~~~----~--~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~ 379 (508)
T 4f6l_B 306 TSPYTRSKFYSELKVLEAV----N--NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVD 379 (508)
T ss_dssp CSHHHHHHHHHHHHHHHHH----H--TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEE
T ss_pred CCcHHHHHHHHHHHHHHHH----H--cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEE
Confidence 279999999988887764 2 2336667777766443221110 00000 00000 011
Q ss_pred CCChHhHHHHHHHHhcCCC
Q psy818 190 CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 190 ~~~pedvA~~v~fl~s~p~ 208 (214)
+...+|+|+++++++..+.
T Consensus 380 ~v~v~DvA~ai~~~~~~~~ 398 (508)
T 4f6l_B 380 FSFVDTTARQIVALAQVNT 398 (508)
T ss_dssp CEEHHHHHHHHHHHTTBCC
T ss_pred EEcHHHHHHHHHHHHhCCC
Confidence 4468999999999998764
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=86.95 E-value=0.18 Score=39.61 Aligned_cols=77 Identities=6% Similarity=0.028 Sum_probs=45.7
Q ss_pred CCCCCCcCc----HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhhHh---H---HhhCCCC
Q psy818 122 PTLGSIEMS----DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKS---L---YEAHPCL 191 (214)
Q Consensus 122 v~i~S~a~~----~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~---~---~~~~~~~ 191 (214)
+++||.++. .|+.+|.+.+.+.+. .+.+++.+.||.+.++.... ........ . .....+.
T Consensus 100 v~~Ss~~~~~~~~~y~~sK~~~e~~~~~---------~~~~~~ilrp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i 169 (286)
T 2zcu_A 100 AYTSLLHADTSPLGLADEHIETEKMLAD---------SGIVYTLLRNGWYSENYLAS-APAALEHGVFIGAAGDGKIASA 169 (286)
T ss_dssp EEEEETTTTTCCSTTHHHHHHHHHHHHH---------HCSEEEEEEECCBHHHHHTT-HHHHHHHTEEEESCTTCCBCCB
T ss_pred EEECCCCCCCCcchhHHHHHHHHHHHHH---------cCCCeEEEeChHHhhhhHHH-hHHhhcCCceeccCCCCccccc
Confidence 566776543 799999998877653 12356677777665543211 00000000 0 0112356
Q ss_pred ChHhHHHHHHHHhcCCC
Q psy818 192 QAEDIANTVEFILSSPP 208 (214)
Q Consensus 192 ~pedvA~~v~fl~s~p~ 208 (214)
.++|+|++++++++.+.
T Consensus 170 ~~~Dva~~~~~~~~~~~ 186 (286)
T 2zcu_A 170 TRADYAAAAARVISEAG 186 (286)
T ss_dssp CHHHHHHHHHHHHHSSS
T ss_pred cHHHHHHHHHHHhcCCC
Confidence 99999999999998763
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=85.94 E-value=0.49 Score=37.52 Aligned_cols=106 Identities=17% Similarity=0.083 Sum_probs=59.0
Q ss_pred CCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcC-------------------cHHHHHHHHHHHHHhhccCcchhh
Q psy818 98 DTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEM-------------------SDYERRQLAARSLRFNLNDKNFCE 153 (214)
Q Consensus 98 e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~-------------------~~Y~a~K~a~~~~~~~l~~~~~~e 153 (214)
+++...+++| ..++.++..+.+.+ +++||.+. ..|+.+|++.+.+.+.++ .+
T Consensus 85 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~----~~ 160 (312)
T 2yy7_A 85 KNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYH----NI 160 (312)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHH----HH
T ss_pred hChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHH----Hh
Confidence 3466667777 33444444444433 56666531 179999999999988876 33
Q ss_pred hCcccccccCccchhhhhccccCC--c---hhhHhHHhhC------------CCCChHhHHHHHHHHhcCCC
Q psy818 154 LFPDLVQSISPGLVKSQIFKSSLG--D---KFDKSLYEAH------------PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 154 ~~~~~vn~v~pg~~~t~~~~~~~~--~---~~~~~~~~~~------------~~~~pedvA~~v~fl~s~p~ 208 (214)
. +.+++.+.|+.+-.+....... . .......... .++..+|+|++++.++..+.
T Consensus 161 ~-~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 231 (312)
T 2yy7_A 161 Y-GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231 (312)
T ss_dssp H-CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCG
T ss_pred c-CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcc
Confidence 2 3466777776554321100000 0 0000000000 13468999999999998764
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=85.93 E-value=0.71 Score=36.12 Aligned_cols=89 Identities=8% Similarity=0.013 Sum_probs=49.9
Q ss_pred HHHHHHhhccCC----CCCCCCcCc----HHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhccccCCchhh
Q psy818 110 LTGLLSFMVERS----PTLGSIEMS----DYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFD 181 (214)
Q Consensus 110 l~a~~~~m~~~~----v~i~S~a~~----~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~ 181 (214)
.+.++..+.+.+ +++||.... .|+.+|.+.+.+.+.. +.+++.+.||.+-++...........
T Consensus 87 ~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~~K~~~E~~~~~~---------~~~~~ilrp~~~~~~~~~~~~~~~~~ 157 (287)
T 2jl1_A 87 HANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTT---------NIPYTFLRNALYTDFFVNEGLRASTE 157 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEEEETTGGGCCSTHHHHHHHHHHHHHHT---------TCCEEEEEECCBHHHHSSGGGHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCCCCchHHHHHHHHHHHHHc---------CCCeEEEECCEeccccchhhHHHHhh
Confidence 344444444444 567776543 7999999988776531 22556666776654431111100000
Q ss_pred Hh-H-----HhhCCCCChHhHHHHHHHHhcCC
Q psy818 182 KS-L-----YEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 182 ~~-~-----~~~~~~~~pedvA~~v~fl~s~p 207 (214)
.. . .....+..++|+|+++++++..+
T Consensus 158 ~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 189 (287)
T 2jl1_A 158 SGAIVTNAGSGIVNSVTRNELALAAATVLTEE 189 (287)
T ss_dssp HTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred CCceeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence 00 0 01123569999999999999876
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=84.88 E-value=0.62 Score=36.83 Aligned_cols=90 Identities=11% Similarity=-0.031 Sum_probs=50.7
Q ss_pred HHHHHHHhhccCC----CCCCCCc---------CcHHHHHHHHHHHHHhhccCcchhhhCcccccccCccchhhhhcccc
Q psy818 109 ILTGLLSFMVERS----PTLGSIE---------MSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSS 175 (214)
Q Consensus 109 ~l~a~~~~m~~~~----v~i~S~a---------~~~Y~a~K~a~~~~~~~l~~~~~~e~~~~~vn~v~pg~~~t~~~~~~ 175 (214)
..+.++..+.+.+ +++||.. ...|+++|++++.+.+.. +.+++.+.||.+.+++....
T Consensus 94 ~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~---------gi~~~ilrp~~~~~~~~~~~ 164 (299)
T 2wm3_A 94 QGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDI---------GVPMTSVRLPCYFENLLSHF 164 (299)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHH---------TCCEEEEECCEEGGGGGTTT
T ss_pred HHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHHC---------CCCEEEEeecHHhhhchhhc
Confidence 3455556565544 4544433 137999999988776542 23567777887766543211
Q ss_pred CCchhhHh------H---HhhCCCCChHhHHHHHHHHhcCC
Q psy818 176 LGDKFDKS------L---YEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 176 ~~~~~~~~------~---~~~~~~~~pedvA~~v~fl~s~p 207 (214)
........ . .....++.++|||++++.++..|
T Consensus 165 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~ 205 (299)
T 2wm3_A 165 LPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMP 205 (299)
T ss_dssp CCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSH
T ss_pred CCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcCh
Confidence 11000000 0 00112458999999999999865
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=81.00 E-value=0.83 Score=39.08 Aligned_cols=67 Identities=10% Similarity=0.107 Sum_probs=44.9
Q ss_pred CCCcCcccHH-HHHHHHHHhhccCC----CCCCCCcCc-----------------------------HHHHHHHHHHHHH
Q psy818 98 DTWNPAWSVS-TILTGLLSFMVERS----PTLGSIEMS-----------------------------DYERRQLAARSLR 143 (214)
Q Consensus 98 e~w~~~~~vn-~~l~a~~~~m~~~~----v~i~S~a~~-----------------------------~Y~a~K~a~~~~~ 143 (214)
+.|...+++| ..++.++..+.+.+ +++||.+.. .|+++|++.+.+.
T Consensus 181 ~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~ 260 (478)
T 4dqv_A 181 FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLL 260 (478)
T ss_dssp SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHH
Confidence 5677888888 34555555555444 667775421 1999999999998
Q ss_pred hhccCcchhhhCcccccccCccchhh
Q psy818 144 FNLNDKNFCELFPDLVQSISPGLVKS 169 (214)
Q Consensus 144 ~~l~~~~~~e~~~~~vn~v~pg~~~t 169 (214)
+.++ .+. +.+++.+.||.+-.
T Consensus 261 ~~~~----~~~-gi~~~ivRpg~v~G 281 (478)
T 4dqv_A 261 REAN----DLC-ALPVAVFRCGMILA 281 (478)
T ss_dssp HHHH----HHH-CCCEEEEEECEEEC
T ss_pred HHHH----HHh-CCCeEEEECceeeC
Confidence 8876 322 34677788887643
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=80.20 E-value=0.75 Score=36.87 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHhhcc
Q psy818 131 DYERRQLAARSLRFNLN 147 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~ 147 (214)
.|+++|++.+.+.+.++
T Consensus 161 ~Y~~sK~~~e~~~~~~~ 177 (335)
T 1rpn_A 161 PYGVAKLYGHWITVNYR 177 (335)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 79999999999988876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 214 | ||||
| d2f4wa1 | 157 | d.20.1.1 (A:12-168) Ubiquitin conjugating enzyme, | 2e-51 | |
| d2a7la1 | 117 | d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 | 2e-26 | |
| d2fo3a1 | 109 | d.20.1.1 (A:9-117) Putative ubiquitin-conjugating | 3e-26 | |
| d1ayza_ | 153 | d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {B | 1e-25 | |
| d2awfa1 | 125 | d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, U | 1e-25 | |
| d1yrva1 | 148 | d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, U | 5e-25 | |
| d2a4da1 | 139 | d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, | 4e-24 | |
| d1jatb_ | 136 | d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {B | 6e-24 | |
| d1y6la_ | 148 | d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {H | 5e-23 | |
| d2uyza1 | 156 | d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, U | 7e-23 | |
| d1pzva_ | 161 | d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {N | 1e-22 | |
| d2bepa1 | 154 | d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2 | 2e-22 | |
| d1z2ua1 | 147 | d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, U | 2e-22 | |
| d1fzya_ | 149 | d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {B | 3e-22 | |
| d2e2ca_ | 156 | d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {C | 3e-22 | |
| d1z3da1 | 149 | d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, U | 4e-22 | |
| d1jata_ | 152 | d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {B | 4e-22 | |
| d1c4zd_ | 144 | d.20.1.1 (D:) Ubiquitin conjugating enzyme, UBC {H | 6e-22 | |
| d1yh2a1 | 154 | d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, U | 9e-22 | |
| d1j7db_ | 149 | d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {H | 1e-20 | |
| d1wzva1 | 150 | d.20.1.1 (A:2-151) Ubiquitin conjugating enzyme, U | 1e-20 | |
| d1zdna1 | 151 | d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, U | 2e-20 | |
| d2f4za1 | 161 | d.20.1.1 (A:32-192) Hypothetical protein Tgtwinsca | 4e-20 | |
| d1i7ka_ | 146 | d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {H | 5e-20 | |
| d2ucza_ | 164 | d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {B | 7e-20 | |
| d2z5da1 | 152 | d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, | 3e-18 | |
| d1y8xa1 | 157 | d.20.1.1 (A:27-183) Ubiquitin conjugating enzyme, | 1e-17 | |
| d1yf9a1 | 158 | d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, | 2e-17 | |
| d1s1qa_ | 141 | d.20.1.2 (A:) Tumor susceptibility gene 101 (TSG10 | 3e-17 | |
| d1zuoa1 | 162 | d.20.1.1 (A:201-362) Ubiquitin-conjugating enzyme | 5e-17 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 5e-05 | |
| d1uzxa_ | 152 | d.20.1.2 (A:) Vacuolar protein sorting-associated | 1e-04 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 2e-04 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 6e-04 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 6e-04 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 0.001 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 0.001 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 0.001 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 0.001 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 0.002 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 0.003 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 0.003 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 0.003 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 0.004 |
| >d2f4wa1 d.20.1.1 (A:12-168) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 J2 [TaxId: 9606]} Length = 157 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 J2 [TaxId: 9606]
Score = 161 bits (409), Expect = 2e-51
Identities = 120/155 (77%), Positives = 137/155 (88%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 2 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 61
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 62 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 121
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLA +SL FNL DK FCELFP++V+ I
Sbjct: 122 ETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEI 156
|
| >d2a7la1 d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 W) {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin-protein ligase W (E2 W) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.6 bits (240), Expect = 2e-26
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPA--NILEWFYVVIGPENTQYEGGMYLG 58
M+S RL+++ + L+ DP P + +I +W + G T YEG +
Sbjct: 1 MAS----MQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQL 56
Query: 59 KLVFPRDFPFKPPSIYMITP----NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLL 114
F +PF P + + +N +CLS+ + W+PA SV ++ ++
Sbjct: 57 LFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILT---EDWSPALSVQSVCLSII 113
Query: 115 SFM 117
S +
Sbjct: 114 SML 116
|
| >d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]} Length = 109 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Putative ubiquitin-conjugating enzyme, E2 domain species: Plasmodium chabaudi [TaxId: 5825]
Score = 95.5 bits (237), Expect = 3e-26
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R++++ +P + +P NI W +G ENT Y +Y K++FP D+P KP
Sbjct: 2 RIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKP 61
Query: 71 PSIYMIT---PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
P +Y + + +N +CLS+ D +NP+ S+S ++ ++S +
Sbjct: 62 PIVYFLQKPPKHTHVYSNGDICLSLLG---DDYNPSLSISGLVLSIISML 108
|
| >d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]
Score = 95.6 bits (237), Expect = 1e-25
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ ++K+D P V A P P N++ W ++IGP +T YE G + L F ++P
Sbjct: 4 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYP 63
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
KPP + ++ D + W P + V++ILT + S + +P
Sbjct: 64 NKPPHVKFLSEMFHPNVYAN-GEICLDILQNRWTPTYDVASILTSIQSLFNDPNP 117
|
| >d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 G1 [TaxId: 9606]
Score = 94.7 bits (235), Expect = 1e-25
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 11 RLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFK 69
L++ +L K+P+ A + ++ W ++IGP +T YEGG++ L FP+D+P +
Sbjct: 3 LLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLR 62
Query: 70 PPSIYMITP--NGRFKTNTRLCLSM----------SDFHPDTWNPAWSVSTILTGLLSFM 117
PP + IT + N +C+S+ + + W P +V TI+ ++S +
Sbjct: 63 PPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISML 122
Query: 118 VE 119
+
Sbjct: 123 AD 124
|
| >d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 U [TaxId: 9606]
Score = 93.6 bits (232), Expect = 5e-25
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPR 64
H A L +D+ LK++ + A+P +++EW + G +N+ ++G ++ + F
Sbjct: 2 HGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTS 61
Query: 65 DFPFKPPSIYMITPNGRFKTNTRLCLSMSDF--HPDTWNPAWSVSTILTGLLSFMVERSP 122
++ + PP + IT + DF +P+ WN +++S+IL L +
Sbjct: 62 EYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVL 121
|
| >d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 variant 1 [TaxId: 9606]
Score = 90.8 bits (225), Expect = 4e-24
Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 6/115 (5%)
Query: 11 RLKQDYMKLKKDPIP----YVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
RL ++ + +K + + + + W ++IGP T YE +Y K+ +
Sbjct: 9 RLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKY 68
Query: 67 PFKPPSIYMITP--NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
P PP + +T ++ + + W ++S+ +L L M+
Sbjct: 69 PEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMS 123
|
| >d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]
Score = 90.5 bits (224), Expect = 6e-24
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 11 RLKQDYMKLKKDPIP----YVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
RL ++ K +K P Y +A+ + + +W ++GP ++ +E +Y + ++
Sbjct: 8 RLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNY 67
Query: 67 PFKPPSIYMITPNGRFKTNTRLCLSMSDFH-PDTWNPAWSVSTILTGLLSFMVE 119
P PP + I+ N +DFH W A+++ T+L L M
Sbjct: 68 PDSPPKVTFISKINLPCVNPTTGEVQTDFHTLRDWKRAYTMETLLLDLRKEMAT 121
|
| >d1y6la_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch8 [TaxId: 9606]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubch8 [TaxId: 9606]
Score = 88.3 bits (218), Expect = 5e-23
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ R++++ ++ DP P A P NI EW ++GP + YEGG++ + F D+P
Sbjct: 3 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYP 62
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER---SPTL 124
FKPP + T N++ + + D D W+PA ++S +L + S + + P +
Sbjct: 63 FKPPKVTFRTRIYHCNINSQGVICL-DILKDNWSPALTISKVLLSICSLLTDCNPADPLV 121
Query: 125 GSIEMSDYERRQLAARSLR 143
GSI R R R
Sbjct: 122 GSIATQYMTNRAEHDRMAR 140
|
| >d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubc9 [TaxId: 9606]
Score = 88.3 bits (218), Expect = 7e-23
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPA-----NILEWFYVVIGPENTQYEGGMYLGKLVF 62
A +RL Q+ +KD +A P N++ W + G + T +EGG++ +++F
Sbjct: 3 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLF 62
Query: 63 PRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDT-WNPAWSVSTILTGLLSFMVERS 121
D+P PP P +S+S D W PA ++ IL G+ + E +
Sbjct: 63 KDDYPSSPPKCKFEPPLFHPNVYPSGTVSLSILEEDKDWRPAITIKQILLGIQELLNEPN 122
Query: 122 P 122
Sbjct: 123 I 123
|
| >d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]
Score = 87.9 bits (217), Expect = 1e-22
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
++ LK+ +++ P+ A + +I +W +VIGP +T YEGG + L FPRD+
Sbjct: 1 SSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDY 60
Query: 67 PFKPPSIYMITPNGRFKTNTRLCLSMSDFHPD------------TWNPAWSVSTILTGLL 114
P KPP + I+ + + +S H W P +V TIL ++
Sbjct: 61 PQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVI 120
Query: 115 SFMVERSP 122
S + + +
Sbjct: 121 SMLTDPNF 128
|
| >d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain species: Cow (Bos taurus) [TaxId: 9913]
Score = 87.2 bits (215), Expect = 2e-22
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 1 MSSKHCGATARLKQDYMKLKKDP---IPYVIAEPNPANILEWFYVVIGPENTQYEGGMYL 57
M++ A R+K+++ ++ K + + N E + GP +T YEGG Y
Sbjct: 1 MANI---AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQ 57
Query: 58 GKLVFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
++ P +PF PP + IT ++ D D W A ++ T+L L + +
Sbjct: 58 LEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALL 117
Query: 118 VERSP 122
P
Sbjct: 118 AAAEP 122
|
| >d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]} Length = 147 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Caenorhabditis elegans, E2 2 [TaxId: 6239]
Score = 86.8 bits (214), Expect = 2e-22
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R++++ L +DP A P ++ W ++GP + Y+GG++ + FP D+P
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 68 FKPPSIYMITP--NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
FKPP + T + +N +CL + W+PA ++S +L + S + + +P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQ---WSPALTISKVLLSICSLLCDPNP 115
|
| >d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]
Score = 86.4 bits (213), Expect = 3e-22
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAE-PNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
R+ ++ +K DP ++ E + ++I +GP T YEGG ++ + P ++
Sbjct: 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEY 61
Query: 67 PFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
PFKPP + T ++ D + W+P ++ + L L + + P
Sbjct: 62 PFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEP 117
|
| >d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Clam (Spisula solidissima), E-2C [TaxId: 6584]
Score = 86.4 bits (213), Expect = 3e-22
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
S + + RL+Q+ L P + A P+ N+ +W + GP++T YE Y L
Sbjct: 4 SKERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLE 63
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121
FP D+P+KPP + TP + D + W ++ V TIL L S + E +
Sbjct: 64 FPSDYPYKPPVVKFTTPCWHPNVDQSGN-ICLDILKENWTASYDVRTILLSLQSLLGEPN 122
Query: 122 P 122
Sbjct: 123 N 123
|
| >d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]
Score = 86.0 bits (212), Expect = 4e-22
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ RL +D+ KL++DP V P NIL W ++ GP+ T +E G + L F ++P
Sbjct: 4 SRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYP 63
Query: 68 FKPPSIYMITP--NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP++ I+ + + +CL + + W+P + V+ ILT + S + E +P
Sbjct: 64 NKPPTVKFISKMFHPNVYADGSICLDI---LQNRWSPTYDVAAILTSIQSLLDEPNPN 118
|
| >d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]} Length = 152 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]
Score = 86.0 bits (212), Expect = 4e-22
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R+ ++ KL DP+P + AEP+ N+ + + GPE + YE G++ +L P D+P +
Sbjct: 7 RIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEA 66
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
P + +T + D W+PA + T+L + + + +P
Sbjct: 67 PKVRFLTKIYHPNIDRL-GRICLDVLKTNWSPALQIRTVLLSIQALLASPNP 117
|
| >d1c4zd_ d.20.1.1 (D:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch7 [TaxId: 9606]} Length = 144 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubch7 [TaxId: 9606]
Score = 85.2 bits (210), Expect = 6e-22
Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 9 TARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ RL ++ +++K + + AN+L W +I P+N Y+ G + ++ FP ++P
Sbjct: 1 SRRLMKELEEIRKCGMKNFRNIQVDEANLLTW-QGLIVPDNPPYDKGAFRIEINFPAEYP 59
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
FKPP I T + + + + + W PA ++ L++ + + P
Sbjct: 60 FKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPE 115
|
| >d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 T [TaxId: 9606]
Score = 85.3 bits (210), Expect = 9e-22
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+RLK++ L +P P + + + + ++G NT YE G++ +++ P +P
Sbjct: 3 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYP 62
Query: 68 FKPPSIYMITP--NGRFKTNTRLCLSMSDFHP-DTWNPAWSVSTILTGLLSFMVERSP 122
F+PP I +TP + + R+CL + P W P+ +++T+LT + M E +P
Sbjct: 63 FEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNP 120
|
| >d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubc13 [TaxId: 9606]
Score = 82.1 bits (202), Expect = 1e-20
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
G R+ ++ +L +P+P + AEP+ +N + V+ GP+++ +EGG + +L P ++
Sbjct: 2 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEY 61
Query: 67 PFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
P P + +T + + + D D W+PA + T+L + + + +P
Sbjct: 62 PMAAPKVRFMTKIYHPNVDKLGRICL-DILKDKWSPALQIRTVLLSIQALLSAPNP 116
|
| >d1wzva1 d.20.1.1 (A:2-151) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 L6 [TaxId: 9606]} Length = 150 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 L6 [TaxId: 9606]
Score = 82.1 bits (202), Expect = 1e-20
Identities = 22/115 (19%), Positives = 47/115 (40%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A+ R+ ++ L+K P PY+ + + ++ ++ P+ Y + ++ FP ++P
Sbjct: 1 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYP 60
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
FKPP I T + + + + W P +L L + +
Sbjct: 61 FKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNI 115
|
| >d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human(Homo sapiens), E2 S [TaxId: 9606]
Score = 81.3 bits (200), Expect = 2e-20
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
+ ++ L DP + PN ++ + + GPE T Y GG++ KL+ +DFP P
Sbjct: 10 LVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASP 69
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
P Y +T + ++ D W + +L + ++ +P
Sbjct: 70 PKGYFLTKIFHPNVGANGEICVNVLKRD-WTAELGIRHVLLTIKCLLIHPNP 120
|
| >d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Hypothetical protein Tgtwinscan 2721, E2 domain species: Toxoplasma gondii [TaxId: 5811]
Score = 81.0 bits (199), Expect = 4e-20
Identities = 27/113 (23%), Positives = 46/113 (40%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R V A+ +I W + GP T YEGG + +V P D+P+ P
Sbjct: 18 RAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNP 77
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
P + +T +++ D W+PA ++ T L + + + + PT
Sbjct: 78 PKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPT 130
|
| >d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubch10 [TaxId: 9606]
Score = 80.2 bits (197), Expect = 5e-20
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
RL+Q+ M L + A P N+ +W + G T YE Y L FP +P
Sbjct: 2 VGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYP 61
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
+ P++ +TP +T+ +S+ D + W+ + V TIL + S + E +
Sbjct: 62 YNAPTVKFLTPCYHPNVDTQGNISL-DILKEKWSALYDVRTILLSIQSLLGEPNI 115
|
| >d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]
Score = 80.6 bits (198), Expect = 7e-20
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
A RL ++ +L KD P ++A P + NI W ++ GP +T Y G++ KL FP+D+
Sbjct: 4 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDY 63
Query: 67 PFKPPSIYMITP--NGRFKTNTRLCLSM----------SDFHPDTWNPAWSVSTILTGLL 114
P PP + + N +C+S+ + + W+P SV IL ++
Sbjct: 64 PLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVM 123
Query: 115 SFMVERSP 122
S + E +
Sbjct: 124 SMLSEPNI 131
|
| >d1y8xa1 d.20.1.1 (A:27-183) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 M [TaxId: 9606]} Length = 157 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 M [TaxId: 9606]
Score = 74.3 bits (182), Expect = 1e-17
Identities = 24/117 (20%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R+++D +L + +P ++L + +VI P+ Y+ G ++ + +P
Sbjct: 4 AQLRIQKDINELNLPKTCDISF-SDPDDLLNF-KLVICPDEGFYKSGKFVFSFKVGQGYP 61
Query: 68 FKPPSIYMIT--PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
PP + T + +CL++ + W P ++++I+ GL +E +P
Sbjct: 62 HDPPKVKCETMVYHPNIDLEGNVCLNI---LREDWKPVLTINSIIYGLQYLFLEPNP 115
|
| >d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Leishmania major [TaxId: 5664]
Score = 74.0 bits (181), Expect = 2e-17
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ R + DYM+L P+ + E++ GPE T YE G ++ + P D+P
Sbjct: 1 SNRRREMDYMRLCNSTR---KVYPSD-TVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYP 56
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
FK PSI + R D TW P + + I L ++
Sbjct: 57 FKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLR 108
|
| >d1s1qa_ d.20.1.2 (A:) Tumor susceptibility gene 101 (TSG101) {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UEV domain domain: Tumor susceptibility gene 101 (TSG101) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.7 bits (178), Expect = 3e-17
Identities = 22/125 (17%), Positives = 42/125 (33%), Gaps = 6/125 (4%)
Query: 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLG--KLV 61
K+ T R + + L KD P + + + G Y G Y L
Sbjct: 14 KYRDLTVRETVNVITLYKDLKPVLDSYVFNDGSSRELMNLTGTIPVPYRGNTYNIPICLW 73
Query: 62 FPRDFPFKPPSIYMI-TPNGRFKTNTRLCLSMSDFHP--DTWNPAWS-VSTILTGLLSFM 117
+P+ PP ++ T + KT + + + P W S + ++ ++
Sbjct: 74 LLDTYPYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVF 133
Query: 118 VERSP 122
+ P
Sbjct: 134 GDEPP 138
|
| >d1zuoa1 d.20.1.1 (A:201-362) Ubiquitin-conjugating enzyme E2 Q2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin-conjugating enzyme E2 Q2, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.0 bits (178), Expect = 5e-17
Identities = 19/135 (14%), Positives = 46/135 (34%), Gaps = 16/135 (11%)
Query: 8 ATARLKQDYMKLKKDPIPYV---IAEPNPANILEWFYVVIG-PENTQYEGGM-------- 55
A+ RL ++ + + E ++ +W + ++ +
Sbjct: 5 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEG 64
Query: 56 ---YLGKLVFPRDFPFKPPSIYMITPNGRF-KTNTRLCLSMSDFHPDTWNPAWSVSTILT 111
L F +FPF PP + ++ P L M W+ A+S+ +++
Sbjct: 65 IEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIM 124
Query: 112 GLLSFMVERSPTLGS 126
+ + +V+ +
Sbjct: 125 QINATLVKGKARVQF 139
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (95), Expect = 5e-05
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDK--SLYEAHPCLQAEDIANTVEFILSSPPHV 210
ISPG+V++Q +K + YE CL+ ED+A V ++LS+P H+
Sbjct: 192 ATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHI 245
|
| >d1uzxa_ d.20.1.2 (A:) Vacuolar protein sorting-associated {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 152 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UEV domain domain: Vacuolar protein sorting-associated species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.8 bits (90), Expect = 1e-04
Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 23/127 (18%)
Query: 9 TARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLG---KLVFPRD 65
+ L ++ L+ + ++ P +L + G +T +G + P
Sbjct: 28 SLALLDNFHSLRPRTRVFTHSDGTPQLLLSIY----GTISTGEDGSSPHSIPVIMWVPSM 83
Query: 66 FPFKPPSIYMITPNGRFKT-------------NTRLCLSMSDFHPDTWNPAWSVSTILTG 112
+P KPP I + N T N + L + A ++ ++
Sbjct: 84 YPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPILH---CWDPAAMNLIMVVQE 140
Query: 113 LLSFMVE 119
L+S + E
Sbjct: 141 LMSLLHE 147
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 38.9 bits (90), Expect = 2e-04
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V I+PG + + KS + + ++ + + P Q +DIAN F+ S
Sbjct: 184 VNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCS 233
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 37.4 bits (86), Expect = 6e-04
Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212
+ + PG V + ++ + D+ + + EDIA V P V
Sbjct: 182 ITDVQPGAVYTPMWGK-VDDEMQALM------MMPEDIAAPVVQAYLQPSRTVV 228
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 37.3 bits (86), Expect = 6e-04
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL-------QAEDIANTVEFILS 205
V SI P + + + ++SL K + P L E IA V F+ S
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS 231
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.5 bits (84), Expect = 0.001
Identities = 8/50 (16%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
+++P ++ + + ++ D+F K + P + E++++ V F+
Sbjct: 183 ANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM 232
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 36.5 bits (84), Expect = 0.001
Identities = 21/133 (15%), Positives = 38/133 (28%), Gaps = 26/133 (19%)
Query: 86 TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMSDYERRQLAARSLRFN 145
T+ + S+++ L F + + L +R N
Sbjct: 128 TKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVN 187
Query: 146 LNDKNFCELFPDLVQSISPGLVKSQIFKS-SLGDKFDKSLYEAHPCL----------QAE 194
SISPGLV + + + ++ K Y + Q +
Sbjct: 188 ---------------SISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ 232
Query: 195 DIANTVEFILSSP 207
DIA + F+
Sbjct: 233 DIAEVIAFLADRK 245
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 36.5 bits (84), Expect = 0.001
Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPC---LQAEDIANTVEFILS 205
V ++ PG +K+ + G + S P + DIA ++ S
Sbjct: 182 VNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 36.4 bits (84), Expect = 0.001
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL----QAEDIANTVEFILS 205
V +I+P LV++ ++S L + D+ F+ S
Sbjct: 177 VNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS 227
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 35.7 bits (82), Expect = 0.002
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP----CLQAEDIANTVEFILS 205
V S+ PG+ + + G + + Y P + +IA V +LS
Sbjct: 176 VNSVHPGMTYTPMTAE-TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLS 225
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 35.5 bits (81), Expect = 0.003
Identities = 30/149 (20%), Positives = 46/149 (30%), Gaps = 20/149 (13%)
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121
R P +I I NG + + + + TG + S
Sbjct: 119 TERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS 178
Query: 122 PTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD--K 179
G MS + +RFN I PG +K++ S L
Sbjct: 179 AKAGVEAMSKSLAAEWGKYGMRFN---------------VIQPGPIKTKGAFSRLDPTGT 223
Query: 180 FDKSLYEAHPC---LQAEDIANTVEFILS 205
F+K + PC E++AN F+ S
Sbjct: 224 FEKEMIGRIPCGRLGTVEELANLAAFLCS 252
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 35.1 bits (80), Expect = 0.003
Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 139 ARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL----QAE 194
+L K V +I PG + + I D ++ E+ + + E
Sbjct: 169 TETLALEYAPKGIR------VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE 222
Query: 195 DIANTVEFILS 205
+IA ++ S
Sbjct: 223 EIAAVAAWLAS 233
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.0 bits (80), Expect = 0.003
Identities = 10/51 (19%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL----QAEDIANTVEFILS 205
V +++P +V + + +++ D L + E + N + F+LS
Sbjct: 174 VNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLS 224
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.0 bits (80), Expect = 0.004
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 10/59 (16%)
Query: 159 VQSISPGLVKSQIFKSSLGD-------KFDKSLYEAHP---CLQAEDIANTVEFILSSP 207
+ +I PG V + I +S + ++ + + L IAN + ++
Sbjct: 176 LNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD 234
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 214 | |||
| d2f4wa1 | 157 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 100.0 | |
| d2a7la1 | 117 | Ubiquitin-protein ligase W (E2 W) {Human (Homo sap | 100.0 | |
| d2e2ca_ | 156 | Ubiquitin conjugating enzyme, UBC {Clam (Spisula s | 100.0 | |
| d2fo3a1 | 109 | Putative ubiquitin-conjugating enzyme, E2 domain { | 100.0 | |
| d2ucza_ | 164 | Ubiquitin conjugating enzyme, UBC {Baker's yeast ( | 100.0 | |
| d1ayza_ | 153 | Ubiquitin conjugating enzyme, UBC {Baker's yeast ( | 99.98 | |
| d1yh2a1 | 154 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.98 | |
| d1z3da1 | 149 | Ubiquitin conjugating enzyme, UBC {Nematode (Caeno | 99.98 | |
| d1z2ua1 | 147 | Ubiquitin conjugating enzyme, UBC {Caenorhabditis | 99.98 | |
| d2awfa1 | 125 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.98 | |
| d1yrva1 | 148 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.98 | |
| d1zdna1 | 151 | Ubiquitin conjugating enzyme, UBC {Human(Homo sapi | 99.98 | |
| d1y6la_ | 148 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.98 | |
| d1i7ka_ | 146 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.97 | |
| d1j7db_ | 149 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.97 | |
| d1jata_ | 152 | Ubiquitin conjugating enzyme, UBC {Baker's yeast ( | 99.97 | |
| d2uyza1 | 156 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.97 | |
| d2bepa1 | 154 | Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain | 99.97 | |
| d1pzva_ | 161 | Ubiquitin conjugating enzyme, UBC {Nematode (Caeno | 99.97 | |
| d1fzya_ | 149 | Ubiquitin conjugating enzyme, UBC {Baker's yeast ( | 99.97 | |
| d2f4za1 | 161 | Hypothetical protein Tgtwinscan_2721, E2 domain {T | 99.96 | |
| d1wzva1 | 150 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.96 | |
| d1c4zd_ | 144 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.96 | |
| d1jatb_ | 136 | Ubiquitin conjugating enzyme, UBC {Baker's yeast ( | 99.96 | |
| d2a4da1 | 139 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.96 | |
| d1y8xa1 | 157 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.95 | |
| d1zuoa1 | 162 | Ubiquitin-conjugating enzyme E2 Q2, C-terminal dom | 99.95 | |
| d2z5da1 | 152 | Ubiquitin conjugating enzyme, UBC {Human (Homo sap | 99.93 | |
| d1yf9a1 | 158 | Ubiquitin conjugating enzyme, UBC {Leishmania majo | 99.93 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.81 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.8 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.79 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.79 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.78 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.78 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.78 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.78 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.78 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.78 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.77 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.77 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.77 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.77 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.77 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.76 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.76 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.76 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.76 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.75 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.75 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.75 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.75 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.74 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.74 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.74 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.74 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.73 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.73 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.72 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.72 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.71 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.7 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.7 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.7 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.69 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.69 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.67 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.67 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.67 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.67 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.67 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.66 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.66 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.65 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.64 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.63 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.6 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.59 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.58 | |
| d1s1qa_ | 141 | Tumor susceptibility gene 101 (TSG101) {Human (Hom | 99.58 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.56 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.53 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.51 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.5 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.47 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.45 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.43 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.41 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.4 | |
| d1uzxa_ | 152 | Vacuolar protein sorting-associated {Baker's yeast | 99.33 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.3 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.28 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.27 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.24 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.21 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.19 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.63 | |
| d2in1a1 | 162 | Ufm1-conjugating enzyme 1, UFC1 {Human (Homo sapie | 97.51 | |
| d2daya1 | 115 | E3 ubiquitin-protein ligase RNF25 {Human (Homo sap | 97.07 | |
| d1ukxa_ | 137 | EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mu | 93.12 | |
| d2dawa1 | 141 | RWD domain-containing protein 2 {Human (Homo sapie | 92.14 | |
| d2daxa1 | 140 | Uncharacterized protein C21orf6 {Human (Homo sapie | 90.1 |
| >d2f4wa1 d.20.1.1 (A:12-168) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 J2 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 J2 [TaxId: 9606]
Probab=100.00 E-value=4.5e-36 Score=223.19 Aligned_cols=151 Identities=78% Similarity=1.375 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCCC
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTNT 86 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ng 86 (214)
+|+|||++|+++|++++++|+++.++++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++.++|+||
T Consensus 1 tA~kRl~kE~~~l~~~p~~g~~~~p~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~~~~g 80 (157)
T d2f4wa1 1 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNT 80 (157)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCSSBCTTS
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCcccceeeeEEECCCCccccCCEEEEEEeccCCcCCCCCEEEeeCCCcccCCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999977778889
Q ss_pred ceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCCCCCCCcCcHHHHHHHHHHHHHhhccCcchhhhCcc
Q psy818 87 RLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPD 157 (214)
Q Consensus 87 ~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v~i~S~a~~~Y~a~K~a~~~~~~~l~~~~~~e~~~~ 157 (214)
.+|+.++++..++|++.+++..++.+++.+|.++++++++.....+...+.+-.+.++....+.+++.++.
T Consensus 81 ~~~~~~l~~~~~~Wsp~~ti~~il~~i~~ll~~p~p~~~~~~~~~~~~~~~~~~~~~f~~k~~~~~~~~~~ 151 (157)
T d2f4wa1 81 RLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPE 151 (157)
T ss_dssp CBC----------CCTTCCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHHTCHHHHHHCHH
T ss_pred CeeeeeccccCCCCCccCcHHHHHHHHHHHccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998887777899999999999999999999998888887766666666666666666665544555544
|
| >d2a7la1 d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 W) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin-protein ligase W (E2 W) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-34 Score=202.24 Aligned_cols=106 Identities=25% Similarity=0.552 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHhcCCCCCeEEee--cCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 9 TARLKQDYMKLKKDPIPYVIAEP--NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~~~~~~~--~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
.|||++|+++|++++++|+++.+ +++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+..+||||
T Consensus 5 ~kRL~kEl~~l~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~F~t~~~~~Hpnv 84 (117)
T d2a7la1 5 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 84 (117)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHhhCCCCCeEEEEecCCCCceEEEEEEeCCCCccccCCeeeEEEecCcccccCCCEEEEeCCCccccccC
Confidence 49999999999999999998764 567999999999999999999999999999999999999999999986568987
Q ss_pred ---CceeeecCCCCCCCCcCcccHHHHHHHHHHhh
Q psy818 86 ---TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117 (214)
Q Consensus 86 ---g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m 117 (214)
|.+|+++++ ++|++.+++..++.+++.+|
T Consensus 85 ~~~G~iCl~~l~---~~Wsp~~ti~~vl~~i~~lL 116 (117)
T d2a7la1 85 YSNGHICLSILT---EDWSPALSVQSVCLSIISML 116 (117)
T ss_dssp CTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHT
T ss_pred cCCCeEEeecCc---CCCCCcCcHHHHHHHHHHHh
Confidence 899999875 78999999999999988766
|
| >d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Clam (Spisula solidissima), E-2C [TaxId: 6584]
Probab=100.00 E-value=9.8e-33 Score=204.52 Aligned_cols=112 Identities=32% Similarity=0.621 Sum_probs=105.2
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecC
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT 84 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ 84 (214)
+++..|||++|+++|++++++|+++.++++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+ +|||
T Consensus 7 ~~~~~kRl~kEl~~l~~~~~~gi~~~p~~~dl~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~~pP~v~f~t~--i~Hp 84 (156)
T d2e2ca_ 7 RHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTP--CWHP 84 (156)
T ss_dssp CCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBT
T ss_pred cchHHHHHHHHHHHHhHCCCCCEEEEECCCcccEEEEEEEcCCccccCCCEEEEEEEecCCCCCCCceeecccc--CcCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999998 8898
Q ss_pred C----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 85 N----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 85 n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
| |.+|++++. +.|++.+++..++.++..+|.+++
T Consensus 85 nv~~~G~icl~~l~---~~Wsp~~~i~~vl~~i~~ll~~P~ 122 (156)
T d2e2ca_ 85 NVDQSGNICLDILK---ENWTASYDVRTILLSLQSLLGEPN 122 (156)
T ss_dssp TBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHTTSCC
T ss_pred CCCCCCCccccccC---CCCCCcccHHHHHHHHHHHHhCCC
Confidence 6 899999874 789999999999999999997754
|
| >d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Putative ubiquitin-conjugating enzyme, E2 domain species: Plasmodium chabaudi [TaxId: 5825]
Probab=100.00 E-value=1.2e-32 Score=192.18 Aligned_cols=103 Identities=30% Similarity=0.648 Sum_probs=96.0
Q ss_pred HHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC----C
Q psy818 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN----T 86 (214)
Q Consensus 11 rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n----g 86 (214)
||+||+++|++++++|+++.++++|+++|++.|.||++|||+||.|+++|.||++||++||+|+|.|+. ++|+| |
T Consensus 2 Rl~kEl~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~F~t~~-~~hpni~~~G 80 (109)
T d2fo3a1 2 RIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKP-PKHTHVYSNG 80 (109)
T ss_dssp HHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSC-CCBTTBCTTS
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCcccEEEEEEecCchhhhcCCCceEEEEeccccCCCCCeEEEEecc-ccCceECCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999962 36775 9
Q ss_pred ceeeecCCCCCCCCcCcccHHHHHHHHHHhh
Q psy818 87 RLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117 (214)
Q Consensus 87 ~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m 117 (214)
.+|++++. ++|++.+++..++.++..+|
T Consensus 81 ~iCl~il~---~~Wsp~~ti~~vl~~i~~ll 108 (109)
T d2fo3a1 81 DICLSLLG---DDYNPSLSISGLVLSIISML 108 (109)
T ss_dssp BBCCGGGT---TTCCTTCCHHHHHHHHHHHH
T ss_pred eEEeeccc---CCCCccCCHHHHHHHHHHHh
Confidence 99999875 78999999999999888766
|
| >d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]
Probab=100.00 E-value=2.2e-32 Score=204.76 Aligned_cols=115 Identities=31% Similarity=0.637 Sum_probs=105.0
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeec-CCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPN-PANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~-~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
|..|.|||++|+++|++++++|+++.+. ++|+++|+++|.||+||||+||.|++.|.||++||++||+|+|.|+ +||
T Consensus 1 s~~a~kRL~~E~~~l~~~~~~gi~~~p~~e~nl~~w~~~I~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~--i~H 78 (164)
T d2ucza_ 1 SKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPS--ILH 78 (164)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CSC
T ss_pred CHHHHHHHHHHHHHHhhCCCCCEEEEECCccchhhhheeeeCCCcccccCCeeEEEEecCCCCCCCCCeEEeecC--cee
Confidence 5689999999999999999999999985 5799999999999999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCC----------CCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDF----------HPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~----------~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.+|++++.. +.+.|++.+++..++.++..+|.+++
T Consensus 79 Pnv~~~G~vCl~il~~~~~~~~~~~~~~~~w~p~~ti~~il~~i~~ll~~p~ 130 (164)
T d2ucza_ 79 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPN 130 (164)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCC
T ss_pred ceEcCCCCeeeccccCccccccccccccccCCccccHHHHHHHHHHHHhCCC
Confidence 86 8999987643 24689999999999999999888765
|
| >d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]
Probab=99.98 E-value=1.9e-32 Score=203.05 Aligned_cols=112 Identities=33% Similarity=0.700 Sum_probs=105.3
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecC
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT 84 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ 84 (214)
|++|.|||++|+++|+++++.|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+ +|||
T Consensus 1 st~A~kRl~~El~~l~~~~~~gi~~~p~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~--i~HP 78 (153)
T d1ayza_ 1 STPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSE--MFHP 78 (153)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCCT
T ss_pred CCHHHHHHHHHHHHHhHCCCCCEEEEECCCcHHhHhheeeCCCCCccCCCEEEEEEecCccccCCCCeeeeccC--CCcc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999 8998
Q ss_pred C----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 85 N----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 85 n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
| |.+|++++. +.|++.+++..++.++..+|.+++
T Consensus 79 nI~~~G~icl~~l~---~~W~p~~~i~~il~~i~~ll~~p~ 116 (153)
T d1ayza_ 79 NVYANGEICLDILQ---NRWTPTYDVASILTSIQSLFNDPN 116 (153)
T ss_dssp TBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHTCCC
T ss_pred CCCCCCcccccccc---ccCCCcCcHHHHHHHHHHHHcCCC
Confidence 7 899998874 789999999999999999887654
|
| >d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 T [TaxId: 9606]
Probab=99.98 E-value=3.9e-32 Score=201.46 Aligned_cols=113 Identities=28% Similarity=0.624 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
.+.+||++|+++|++++++||++.++++|+++|+++|.||+||||+||+|++.|.||++||++||+|+|.|+ +||||
T Consensus 2 ~~~~Rl~kE~~~l~~~~~~gi~~~p~~~~~~~w~~~I~Gp~~TpY~gg~f~~~i~~p~~YP~~pP~v~f~t~--i~HPnV 79 (154)
T d1yh2a1 2 QRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTP--IYHPNI 79 (154)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBTTB
T ss_pred cHHHHHHHHHHHHHHCcCCCEEEEECCcchhhhhceEeCCCCCCCCCCEEEEEEecCccccCCCceeeccCC--CCcCCc
Confidence 578999999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred ---CceeeecCCCCC-CCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ---TRLCLSMSDFHP-DTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ---g~ic~~~l~~~~-e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|+++++... +.|++.+++..++.++..+|.++.
T Consensus 80 ~~~g~icl~~l~~~~~~~w~p~~~i~~il~~i~~ll~~p~ 119 (154)
T d1yh2a1 80 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPN 119 (154)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCC
T ss_pred CCCCCcccccccCCccccCCccccHHHHHHHHHHHhccCC
Confidence 899999886543 689999999999999999887765
|
| >d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]
Probab=99.98 E-value=2.2e-32 Score=201.60 Aligned_cols=112 Identities=33% Similarity=0.693 Sum_probs=104.5
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecC
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT 84 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~ 84 (214)
|++|.|||++|+++|+++++.|+++.++++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+ +|||
T Consensus 1 ~~pa~rRl~~E~~~l~~~~~~gi~~~p~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~--i~HP 78 (149)
T d1z3da1 1 TTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISK--MFHP 78 (149)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCCT
T ss_pred CCHHHHHHHHHHHHHhhCCCCCEEEEECCCchhhhceeEECCCCccccCCEEEEEEEecCcCCCCCcEEEecCc--ccce
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999 8998
Q ss_pred C----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 85 N----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 85 n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
| |.+|++++. +.|++.+++..++..+..+|..++
T Consensus 79 nI~~~G~iCl~~l~---~~w~p~~~i~~il~~i~~ll~~p~ 116 (149)
T d1z3da1 79 NVYADGSICLDILQ---NRWSPTYDVAAILTSIQSLLDEPN 116 (149)
T ss_dssp TBCTTCBBCCGGGT---TSCCTTCCHHHHHHHHHHTTSSCC
T ss_pred eEcCCCCEEecccc---ccCCCCCCHHHHHHHHHHHhCCCC
Confidence 7 899999874 679999999999999998887654
|
| >d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Caenorhabditis elegans, E2 2 [TaxId: 6239]
Probab=99.98 E-value=2.3e-32 Score=201.26 Aligned_cols=110 Identities=28% Similarity=0.691 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
+|+|||++|+++|+++++.||++.++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ +||||
T Consensus 1 ~a~kRL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPnV 78 (147)
T d1z2ua1 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTR--IYHPNI 78 (147)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBTTB
T ss_pred CHHHHHHHHHHHHHhCCCCCeEEEECCCchhhhhheecCCCCCCcCCCceEEEEecCcCCCCCCceEEEecC--CceeeE
Confidence 479999999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred ---CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ---TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ---g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. +.|++.+++..++..+..+|.+++
T Consensus 79 ~~~G~iCl~~l~---~~w~p~~~i~~Il~~i~~ll~~p~ 114 (147)
T d1z2ua1 79 NSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPN 114 (147)
T ss_dssp CTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCEeeehhc---ccCCCCCCHHHHHHHHHHHhccCC
Confidence 899999875 569999999999999999888765
|
| >d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 G1 [TaxId: 9606]
Probab=99.98 E-value=3.9e-32 Score=194.37 Aligned_cols=108 Identities=30% Similarity=0.693 Sum_probs=98.6
Q ss_pred HHHHHHHHHHhcCCCCCeEEee-cCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC---
Q psy818 10 ARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN--- 85 (214)
Q Consensus 10 ~rl~~e~~~l~~~~~~~~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n--- 85 (214)
-||+||+++|++++++|+.+.+ +++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ +||+|
T Consensus 2 ~~L~kEl~~l~~~~~~gi~~~~~~~~dl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~--i~Hpni~~ 79 (125)
T d2awfa1 2 LLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITE--IWHPNVDK 79 (125)
T ss_dssp HHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CCCTTBCT
T ss_pred chHHHHHHHHHhCCCCCEEEEeCCCCCceEEEEEEeCCCCcccCCCeeEEEEecCCCcCCCCCeEEecCC--CCccccCC
Confidence 5899999999999999999987 46689999999999999999999999999999999999999999999 88886
Q ss_pred -CceeeecCCC----------CCCCCcCcccHHHHHHHHHHhhcc
Q psy818 86 -TRLCLSMSDF----------HPDTWNPAWSVSTILTGLLSFMVE 119 (214)
Q Consensus 86 -g~ic~~~l~~----------~~e~w~~~~~vn~~l~a~~~~m~~ 119 (214)
|.+|++++.. ..++|++.+++..++.+++.+|.+
T Consensus 80 ~G~iCl~iL~~~~~~~~~~~~~~~~Wsp~~ti~~iL~~i~~ll~~ 124 (125)
T d2awfa1 80 NGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLAD 124 (125)
T ss_dssp TCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSC
T ss_pred CCEEEeccccCccccccccccccCCcCccCcHHHHHHHHHHHhhC
Confidence 8999998743 247899999999999999988765
|
| >d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 U [TaxId: 9606]
Probab=99.98 E-value=1.1e-32 Score=202.51 Aligned_cols=115 Identities=25% Similarity=0.543 Sum_probs=106.5
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
|+..|.+||+||+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ +||
T Consensus 1 m~~~a~~~L~kE~~~l~~~~~~gi~v~p~~~n~~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~~pP~v~f~t~--i~H 78 (148)
T d1yrva1 1 MHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITI--PFH 78 (148)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSC--CCC
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCcccEEEEEEEeCCCCccCCCceEEEEEeccccccCCceeeeccc--ccc
Confidence 678899999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.+|+++++ +.++|++.+++..++.++..+|.++.
T Consensus 79 pnV~~~~G~iC~~~l~-~~~~W~p~~tl~~vL~~I~~ll~~p~ 120 (148)
T d1yrva1 79 PNVDPHTGQPCIDFLD-NPEKWNTNYTLSSILLALQVMLSNPV 120 (148)
T ss_dssp TTBCTTTCCBCCHHHH-CGGGCCTTCCHHHHHHHHHHHHTSCC
T ss_pred CceecCcccccccccC-chhhcCccccHHHHHHHHHHHHhCCC
Confidence 86 789999764 24689999999999999998887643
|
| >d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human(Homo sapiens), E2 S [TaxId: 9606]
Probab=99.98 E-value=3.3e-32 Score=200.72 Aligned_cols=114 Identities=23% Similarity=0.482 Sum_probs=107.1
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCcee
Q psy818 3 SKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRF 82 (214)
Q Consensus 3 ~~~~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~ 82 (214)
+++..++|||++|+++|++++++|+++.++++|+++|+++|.||+||||+||.|++.|.||++||++||+|+|.|+ +|
T Consensus 2 ~~~~~~~kRl~kEl~~l~~~~~~gi~v~p~~~dl~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~--i~ 79 (151)
T d1zdna1 2 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTK--IF 79 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCeEEEEcCcchheeEEEEecCCCcCccCCceeeeeecCCCCCCCCceeecCCC--CC
Confidence 4678899999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred cCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 83 KTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 83 h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
||| |.+|++++. ++|++.+++..++..+..+|.+++
T Consensus 80 HPnI~~~G~ic~~~l~---~~W~p~~~l~~il~~i~~~l~~p~ 119 (151)
T d1zdna1 80 HPNVGANGEICVNVLK---RDWTAELGIRHVLLTIKCLLIHPN 119 (151)
T ss_dssp CTTBCTTSBBCHHHHT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CceecCCCCccccccc---ccCCccccHHHHHHHHHHHHhCCC
Confidence 987 899998765 689999999999999999998765
|
| >d1y6la_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubch8 [TaxId: 9606]
Probab=99.98 E-value=5e-32 Score=199.50 Aligned_cols=111 Identities=31% Similarity=0.711 Sum_probs=104.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC
Q psy818 6 CGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN 85 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n 85 (214)
+.+.|||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|+ +||||
T Consensus 1 s~~~kRi~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~YP~~pP~v~f~t~--i~HPn 78 (148)
T d1y6la_ 1 STSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTR--IYHCN 78 (148)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBTT
T ss_pred ChHHHHHHHHHHHHhhCCCCCEEEEECCcccceeceEEECCCCCCcCCCeEEEEEecCcccCCCCcEEEEeCC--CcCce
Confidence 3689999999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. +.|.+.+++..++.++..+|.+++
T Consensus 79 v~~~G~iCl~~l~---~~W~p~~~l~~il~~i~~ll~~p~ 115 (148)
T d1y6la_ 79 INSQGVICLDILK---DNWSPALTISKVLLSICSLLTDCN 115 (148)
T ss_dssp BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred ECCCCeEEEEecC---CcCCCcEeHHHHHHHHHHHHhCCC
Confidence 899999874 689999999999999999998765
|
| >d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubch10 [TaxId: 9606]
Probab=99.97 E-value=4.2e-32 Score=199.06 Aligned_cols=110 Identities=27% Similarity=0.519 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
++.|||++|+++|++++++|+++.++++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+ +||||
T Consensus 1 p~~kRl~~El~~l~~~~~~~i~~~~~~~d~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPnV 78 (146)
T d1i7ka_ 1 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTP--CYHPNV 78 (146)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSC--CCSTTB
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEcCCcccEEEEEEecCccccccCCEEEEEEEecCCCCcCCceeeecCC--CCcccC
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred ---CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ---TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ---g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. +.|++.+++..++.++..+|.++.
T Consensus 79 ~~~G~icl~~l~---~~W~p~~~i~~il~~i~~ll~~p~ 114 (146)
T d1i7ka_ 79 DTQGNISLDILK---EKWSALYDVRTILLSIQSLLGEPN 114 (146)
T ss_dssp CTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCcccccccc---ccCCCCcCHHHHHHHHHHHHhCCC
Confidence 899998764 789999999999999999888754
|
| >d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubc13 [TaxId: 9606]
Probab=99.97 E-value=2.2e-31 Score=196.07 Aligned_cols=108 Identities=27% Similarity=0.664 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC---
Q psy818 9 TARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN--- 85 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n--- 85 (214)
.|||++|+++|+++++.|+++.++++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ +||||
T Consensus 4 ~kRl~kEl~~l~~~~~~gi~~~p~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPni~~ 81 (149)
T d1j7db_ 4 PRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTK--IYHPNVDK 81 (149)
T ss_dssp CHHHHHHHHHHTTSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSC--CCBTTBCT
T ss_pred cHHHHHHHHHHHhCCCCCEEEEECCCcccEeeeEEECCcccccCCCEEEEEEecCCcccCCCceeeecCC--CCCceECC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred -CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 -TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 -g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. +.|++.+++..++..+..+|.++.
T Consensus 82 ~G~icl~~l~---~~w~p~~~i~~il~~i~~ll~~p~ 115 (149)
T d1j7db_ 82 LGRICLDILK---DKWSPALQIRTVLLSIQALLSAPN 115 (149)
T ss_dssp TCBBCCGGGT---TSCCTTSCHHHHHHHHHHHHHSCC
T ss_pred CCcEehHHhc---CCCCCCccHHHHHHHHHHHHhCCC
Confidence 899999875 679999999999999999887754
|
| >d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]
Probab=99.97 E-value=8.3e-32 Score=198.86 Aligned_cols=111 Identities=28% Similarity=0.629 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC
Q psy818 6 CGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN 85 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n 85 (214)
..+.|||++|+++|++++++||++.++++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|+ +||||
T Consensus 2 ~~~~rRl~~E~~~l~~~~~~g~~~~p~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~F~t~--i~HPn 79 (152)
T d1jata_ 2 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTK--IYHPN 79 (152)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSC--CCBTT
T ss_pred CcHHHHHHHHHHHHHhCCCCCEEEEEcCCccchhheeeeCCchhhhcCCEEEEEEecCccCCCCCcEEEecCC--CCCCc
Confidence 3456899999999999999999999999999999999999999999999999999999999999999999999 89987
Q ss_pred ----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. +.|++.+++..++..+..+|.++.
T Consensus 80 I~~~G~icl~~~~---~~W~p~~~i~~il~~i~~ll~~P~ 116 (152)
T d1jata_ 80 IDRLGRICLDVLK---TNWSPALQIRTVLLSIQALLASPN 116 (152)
T ss_dssp BCTTCCBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCCeeecccc---ccCCchhHHHHHHHHHHHHHcCCC
Confidence 899998765 679999999999999999998765
|
| >d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubc9 [TaxId: 9606]
Probab=99.97 E-value=2.1e-31 Score=197.37 Aligned_cols=112 Identities=29% Similarity=0.550 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCC-----CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCce
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEPNPA-----NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGR 81 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~ 81 (214)
.|++||++|+++|+++++.|+++.+.++ |+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ +
T Consensus 2 ~a~~Rl~~E~~~~~~~~~~g~~~~p~~~~~~~~n~~~W~~~i~gp~gtpY~gg~f~~~i~fp~~YP~~pP~v~f~t~--i 79 (156)
T d2uyza1 2 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP--L 79 (156)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--C
T ss_pred hHHHHHHHHHHHHHHCCCCCeEEEecCCCCCCCcccEEEEEEEcCCCCCccCCEEEEEEeCCccccCCCceeeeccc--c
Confidence 5899999999999999999999988865 89999999999999999999999999999999999999999999 8
Q ss_pred ecCC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 82 FKTN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 82 ~h~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|||| |.+|++++. ..++|++.+++..++..+..+|.+++
T Consensus 80 ~HPnV~~~G~icl~~l~-~~~~W~p~~ti~~il~~i~~ll~~p~ 122 (156)
T d2uyza1 80 FHPNVYPSGTVSLSILE-EDKDWRPAITIKQILLGIQELLNEPN 122 (156)
T ss_dssp CSTTBCTTSBBCCGGGC-TTTTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred ccccccccceeeecccC-cccccCCcccHHHHHHHHHHHhcCCC
Confidence 9987 899998764 23679999999999999999887654
|
| >d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=7.3e-31 Score=194.30 Aligned_cols=113 Identities=27% Similarity=0.510 Sum_probs=104.4
Q ss_pred CchHHHHHHHHHHHHHhcCC---CCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCc
Q psy818 4 KHCGATARLKQDYMKLKKDP---IPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNG 80 (214)
Q Consensus 4 ~~~~~~~rl~~e~~~l~~~~---~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~ 80 (214)
|++.+.+||++|+++|++++ ..++.+.++++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~Rl~kE~~~l~~~~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~-- 78 (154)
T d2bepa1 1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK-- 78 (154)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--
T ss_pred CchHHHHHHHHHHHHHHHCCCCCCCcEEEEcCCCChhheEeeEecCccccccCCeeEEEEeccccccCCCCcceeccc--
Confidence 68899999999999998863 5689999999999999999999999999999999999999999999999999999
Q ss_pred eecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 81 RFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 81 ~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
+|||| |.+|++++. +.|++.+++..++.++..+|.+++
T Consensus 79 i~Hpni~~~~g~ic~~~~~---~~W~p~~~i~~il~~i~~ll~~p~ 121 (154)
T d2bepa1 79 IWHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAE 121 (154)
T ss_dssp CCBTTBCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCeeCCCCcccccccc---ccCCCcCCHHHHHHHHHHHHcCCC
Confidence 89986 789998764 789999999999999999998764
|
| >d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]
Probab=99.97 E-value=2e-30 Score=193.32 Aligned_cols=111 Identities=32% Similarity=0.635 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeec-CCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC--
Q psy818 9 TARLKQDYMKLKKDPIPYVIAEPN-PANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN-- 85 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~~~~~~~~-~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n-- 85 (214)
..||+||+++|++++++|+++.+. ++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+ +||||
T Consensus 2 ~~~L~kE~~~l~~~~~~g~~v~~~~~~dl~~W~~~i~gp~~tpY~gg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPnI~ 79 (161)
T d1pzva_ 2 SLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISE--IWHPNID 79 (161)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSSCSSCEEEEEEECCTTGGGSCCEEEECSC--CCCTTBC
T ss_pred ChHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCcchhhcCCEEEEEEeCCCCCCCCCCeEEecCC--CCCcccC
Confidence 469999999999999999999886 4689999999999999999999999999999999999999999999 89987
Q ss_pred --CceeeecCCCC----------CCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 --TRLCLSMSDFH----------PDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 --g~ic~~~l~~~----------~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++... .+.|++.+++..++.++..+|.+++
T Consensus 80 ~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~ll~~p~ 127 (161)
T d1pzva_ 80 KEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPN 127 (161)
T ss_dssp TTSBBCCGGGCCC---------CCSSCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCccchhhcCCcccccccccccccccCccccHHHHHHHHHHHHhCCC
Confidence 89999976432 3469999999999999999887754
|
| >d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]
Probab=99.97 E-value=2.7e-30 Score=190.32 Aligned_cols=110 Identities=25% Similarity=0.546 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEee-cCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC
Q psy818 7 GATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN 85 (214)
Q Consensus 7 ~~~~rl~~e~~~l~~~~~~~~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n 85 (214)
++.|||++|+++|++++++||++.+ +++|+++|+++|.||+||||+||.|++.|.||++||++||+|+|.|+ +||||
T Consensus 1 s~~kRL~~El~~l~~~~~~gi~~~~~~~~~~~~w~~~I~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~--i~Hpn 78 (149)
T d1fzya_ 1 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTK--VYHPN 78 (149)
T ss_dssp CHHHHHHHHHHHHHTCGGGCEEEEESCSSCSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC--CCBTT
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCchhEEEEEEEcCCCCCCCCCceeEEEEecCCcccCCcEEEecCC--CcCCc
Confidence 3689999999999999999999975 56799999999999999999999999999999999999999999999 99987
Q ss_pred -----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 -----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 -----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|+.++ .+.|++.+++..++..+..+|.+++
T Consensus 79 I~~~~~~~~~~~~---~~~W~p~~ti~~il~~i~~ll~~p~ 116 (149)
T d1fzya_ 79 ISSVTGAICLDIL---KNAWSPVITLKSALISLQALLQSPE 116 (149)
T ss_dssp BCTTTCCBCCGGG---TTTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred ccCCcceeechhh---cccCCCcCCHHHHHHHHHHHHhCCC
Confidence 45666654 4789999999999999999998754
|
| >d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Hypothetical protein Tgtwinscan 2721, E2 domain species: Toxoplasma gondii [TaxId: 5811]
Probab=99.96 E-value=4.2e-30 Score=191.09 Aligned_cols=109 Identities=27% Similarity=0.577 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHhc-------------CCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEE
Q psy818 8 ATARLKQDYMKLKK-------------DPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIY 74 (214)
Q Consensus 8 ~~~rl~~e~~~l~~-------------~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~ 74 (214)
..+||+||+++|++ ++..|+++.++++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+
T Consensus 2 ~~~Rl~ke~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~~W~~~I~Gp~~TpY~gg~f~~~i~fp~~YP~~pP~V~ 81 (161)
T d2f4za1 2 EQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMK 81 (161)
T ss_dssp HHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred chhHHHHHHHHHHHHhhccccCcccccCCCCCeEEEecCCccceeEEEEeCCCCCccCCCEEEEEEeccCCCCCCCcEEE
Confidence 46899999999977 34568999999999999999999999999999999999999999999999999
Q ss_pred EEcCCceecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 75 MITPNGRFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 75 f~t~~~~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.|+ +|||| |.+|++++. +.|++.+++..++.++..+|.+++
T Consensus 82 F~t~--i~HPni~~~~G~icl~~l~---~~W~p~~si~~iL~~I~~ll~~P~ 128 (161)
T d2f4za1 82 FVTK--IWHPNISSQTGAICLDILK---HEWSPALTIRTALLSIQAMLADPV 128 (161)
T ss_dssp ESSC--CCBTTBCTTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCC
T ss_pred ecCC--CCCCceECCCCCeecCccc---ccCCCcccHHHHHHHHHHHHhCCC
Confidence 9999 89986 889998764 679999999999999999998765
|
| >d1wzva1 d.20.1.1 (A:2-151) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 L6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 L6 [TaxId: 9606]
Probab=99.96 E-value=8.8e-30 Score=187.76 Aligned_cols=109 Identities=27% Similarity=0.590 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeec-CCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC-
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPN-PANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN- 85 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~-~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n- 85 (214)
|.+||++|+++|++++++|+++.+. ++|++.|++.| ||++|||+||.|+++|.||++||++||+|+|.|+ +||+|
T Consensus 1 a~~Rl~kE~~~l~~~~p~gi~~~~~~~~~~~~w~~ii-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~--i~HpnI 77 (150)
T d1wzva1 1 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALL-LPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTK--IYHPNV 77 (150)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEE-CCCSTTGGGEEEEEEEECCTTTTSSCCEEEESSC--CCBTTB
T ss_pred CHHHHHHHHHHHHHCCCCCEEEEecCCCceEEEEEEE-CCCCCCccCceeeEEEecCcCCccCCceeeccCC--CCcceE
Confidence 4789999999999999999998776 46899999866 8999999999999999999999999999999999 89987
Q ss_pred ---CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 ---TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 ---g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. .+.|++.+++..++.++..+|.+++
T Consensus 78 ~~~G~icl~~l~--~~~W~p~~~i~~il~~i~~ll~~p~ 114 (150)
T d1wzva1 78 DENGQICLPIIS--SENWKPCTKTCQVLEALNVLVNRPN 114 (150)
T ss_dssp CTTCBCCCGGGC--TTTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCccccccc--ccCCCchhHHHHHHHHHHHHHhCCC
Confidence 899999864 3689999999999999999998754
|
| >d1c4zd_ d.20.1.1 (D:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), ubch7 [TaxId: 9606]
Probab=99.96 E-value=3.7e-30 Score=188.53 Aligned_cols=107 Identities=25% Similarity=0.591 Sum_probs=97.9
Q ss_pred HHHHHHHHHHhcCCCCCeEEee-cCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC---
Q psy818 10 ARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN--- 85 (214)
Q Consensus 10 ~rl~~e~~~l~~~~~~~~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n--- 85 (214)
|||++|+++|++++++|+.+.+ +++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+ +||||
T Consensus 2 rRl~kEl~~l~~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpY~gg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPnV~~ 78 (144)
T d1c4zd_ 2 RRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLI-VPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTK--IYHPNIDE 78 (144)
T ss_dssp TTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEE-CCCSSSCCSCCEEEEEECCTTTTTSCCEEEESSC--CCCTTBCT
T ss_pred HHHHHHHHHHHhCCCCCeEEEECCCCcceEEEEEE-CCCCcCccCCEEEEEEEecCcccCCCceeeccCC--CCCcCCcc
Confidence 7999999999999999998655 567999999998 9999999999999999999999999999999999 89987
Q ss_pred -CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 86 -TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 86 -g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|.+|++++. .+.|.+.+++..++.++..+|.++.
T Consensus 79 ~G~icl~~l~--~~~w~p~~~i~~il~~i~~ll~~p~ 113 (144)
T d1c4zd_ 79 KGQVCLPVIS--AENWKPATKTDQVIQSLIALVNDPQ 113 (144)
T ss_dssp TCBBCCTTTS--SSSCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCcccccccc--CCCCCCcccHHHHHHHHHHHHhCCC
Confidence 899999865 3679999999999999999887754
|
| >d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]
Probab=99.96 E-value=5.9e-30 Score=184.58 Aligned_cols=112 Identities=17% Similarity=0.245 Sum_probs=95.5
Q ss_pred chHHHHHHHHHHHHHhcCC-CCCeEEeecCC---CcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCc
Q psy818 5 HCGATARLKQDYMKLKKDP-IPYVIAEPNPA---NILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNG 80 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~-~~~~~~~~~~~---~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~ 80 (214)
...+.+||+|||++++|+. +.+++..+.++ |+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|+
T Consensus 2 ~~p~~~RL~kEl~~~~k~~~~~~~~~~~~~~dd~~l~~W~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~PP~v~f~t~-- 79 (136)
T d1jatb_ 2 KVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK-- 79 (136)
T ss_dssp CCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC--
T ss_pred CCchHHHHHHHHHHHhccCCCCcEEEeecCCCCCceeEEEEEEECCCCChhhcCEEEEEEEecCCCCCCCCEEEEecc--
Confidence 4568899999999999986 45676665543 49999999999999999999999999999999999999999999
Q ss_pred eecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccC
Q psy818 81 RFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120 (214)
Q Consensus 81 ~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~ 120 (214)
+||+| |.+|++++. .++|++.+++..++.++..+|.++
T Consensus 80 i~HpnV~~~~G~icl~~l~--~~~Wsp~~ti~~IL~~i~~lL~~P 122 (136)
T d1jatb_ 80 INLPCVNPTTGEVQTDFHT--LRDWKRAYTMETLLLDLRKEMATP 122 (136)
T ss_dssp CCCTTBCTTTCBBCTTSHH--HHTCCTTCCHHHHHHHHHHHHTSH
T ss_pred ccccccccCCCeEECCCCc--ccCcCccCcHHHHHHHHHHHHcCC
Confidence 88886 788988653 367999999999999999998653
|
| >d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 variant 1 [TaxId: 9606]
Probab=99.96 E-value=1.5e-29 Score=183.48 Aligned_cols=112 Identities=19% Similarity=0.280 Sum_probs=94.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeec----CCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCce
Q psy818 6 CGATARLKQDYMKLKKDPIPYVIAEPN----PANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGR 81 (214)
Q Consensus 6 ~~~~~rl~~e~~~l~~~~~~~~~~~~~----~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~ 81 (214)
-.+.+||+||+++|++++++++..... ++|+++|+++|.||.+|||+||.|+++|.||++||++||+|+|.|+ +
T Consensus 4 ~~r~~RL~kEl~~l~k~~~~~~~~~~~~~~~d~nl~~W~~~I~Gp~~TpYegg~f~~~i~fp~~YP~~pP~v~F~t~--i 81 (139)
T d2a4da1 4 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK--I 81 (139)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC--C
T ss_pred cchhHHHHHHHHHHhhCCCCCceeeeccCCCcccccEEEEEEECCCCCchhcCEEEEEEECCCCCCCCCCEEEEecC--c
Confidence 357899999999999998887665443 3379999999999999999999999999999999999999999999 8
Q ss_pred ecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccC
Q psy818 82 FKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120 (214)
Q Consensus 82 ~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~ 120 (214)
||+| |.+|...++. .++|++.+++..++.+++.+|.++
T Consensus 82 ~HpnV~~~~g~~~~~~l~~-l~~Wsp~~ti~~iL~~i~slL~~p 124 (139)
T d2a4da1 82 NMNGVNSSNGVVDPRAISV-LAKWQNSYSIKVVLQELRRLMMSK 124 (139)
T ss_dssp CCTTBCTTTCBBCGGGSHH-HHTCCTTCCHHHHHHHHHHHHTST
T ss_pred ccccCcCCCCEEcceecCc-ccCCCccCcHHHHHHHHHHHHCCC
Confidence 8887 3444443321 147999999999999999988764
|
| >d1y8xa1 d.20.1.1 (A:27-183) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 M [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Human (Homo sapiens), E2 M [TaxId: 9606]
Probab=99.95 E-value=8e-29 Score=183.47 Aligned_cols=109 Identities=21% Similarity=0.484 Sum_probs=96.5
Q ss_pred chHHHHHHHHHHHHHhcCCCCCeEEee-cCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceec
Q psy818 5 HCGATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFK 83 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~~~~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h 83 (214)
+++|.+||++|+++|++.+ ++.+.. +++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.++ +||
T Consensus 1 ~~~a~~Rl~kEl~~l~~~~--~~~i~~~~~~~l~~w~~~i-~p~~t~Y~gg~f~~~i~fp~~YP~~pP~V~f~t~--i~H 75 (157)
T d1y8xa1 1 ASAAQLRIQKDINELNLPK--TCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM--VYH 75 (157)
T ss_dssp CCHHHHHHHHHHHTCCCCT--TEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSC--CCB
T ss_pred CCHHHHHHHHHHHHhCCCC--CCcEEEcCCCcceEEEEEE-CCCCCCcCCCeEEEEEEecCCCCCCCceeeeccc--CCC
Confidence 4689999999999998643 555543 568999999999 8999999999999999999999999999999999 899
Q ss_pred CC----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCC
Q psy818 84 TN----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121 (214)
Q Consensus 84 ~n----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~ 121 (214)
|| |.+|++++. +.|++.+++..++..+..+|.+++
T Consensus 76 Pnv~~~G~ic~~~~~---~~W~p~~~i~~il~~I~~ll~~Pn 114 (157)
T d1y8xa1 76 PNIDLEGNVCLNILR---EDWKPVLTINSIIYGLQYLFLEPN 114 (157)
T ss_dssp TTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred ccccccceeeeeecc---cCCCCCCcHHHHHHHHHHHHcCCC
Confidence 97 899998764 689999999999999999998764
|
| >d1zuoa1 d.20.1.1 (A:201-362) Ubiquitin-conjugating enzyme E2 Q2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin-conjugating enzyme E2 Q2, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.8e-29 Score=188.16 Aligned_cols=115 Identities=17% Similarity=0.402 Sum_probs=102.1
Q ss_pred chHHHHHHHHHHHHHhcCCC--CC-eEEeecCCCcccEEEEEEC-CCCCCCCCcE-----------EEEEEECCCCCCCC
Q psy818 5 HCGATARLKQDYMKLKKDPI--PY-VIAEPNPANILEWFYVVIG-PENTQYEGGM-----------YLGKLVFPRDFPFK 69 (214)
Q Consensus 5 ~~~~~~rl~~e~~~l~~~~~--~~-~~~~~~~~~~~~w~~~i~g-p~~t~y~gg~-----------f~~~i~fp~~YP~~ 69 (214)
|..|.+||+|||++|++++. .| +.+.++++|+++|++.|.| |++|||+||. |+|+|.||++||++
T Consensus 2 s~~a~~RL~kEl~~l~k~~~~~~~~~~v~~~~dnl~~W~v~i~g~p~~tp~~~g~~~~~~~~g~~~~~l~i~fp~~YP~~ 81 (162)
T d1zuoa1 2 SVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFD 81 (162)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCeEEeecCCCcccEEEEEEEecCCCCchhcchhhhhcccCCceEEEEEECCCchhhh
Confidence 67899999999999998764 23 5678889999999999999 8999999986 99999999999999
Q ss_pred CCeEEEEcCCceecCC-----CceeeecCCCCCCCCcCcccHHHHHHHHHHhhccCCCC
Q psy818 70 PPSIYMITPNGRFKTN-----TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123 (214)
Q Consensus 70 pP~v~f~t~~~~~h~n-----g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~~v~ 123 (214)
||+|+|.|| +||+| |.+|++++. .+.|++.+++..++..+..+|.+++++
T Consensus 82 PP~v~f~t~--i~hpn~~~~~G~iCl~iL~--~~~WsP~~ti~~IL~~i~~ll~~~~p~ 136 (162)
T d1zuoa1 82 PPFVRVVLP--VLSGGYVLGGGALCMELLT--KQGWSSAYSIESVIMQINATLVKGKAR 136 (162)
T ss_dssp CCEEEEEES--CEESTTBCGGGBBCCGGGS--TTTCCTTSCHHHHHHHHHHHHHHTTCE
T ss_pred cceEEEEEE--eeccccccCCceeeccccc--CCCCCCcccHHHHHHHHHHHHcCCCCC
Confidence 999999999 88875 889999873 467999999999999999999876643
|
| >d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UBC-related domain: Ubiquitin conjugating enzyme, UBC species: Leishmania major [TaxId: 5664]
Probab=99.93 E-value=2e-26 Score=170.41 Aligned_cols=102 Identities=29% Similarity=0.620 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEEcCCceecCC---
Q psy818 9 TARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKTN--- 85 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~~~~~h~n--- 85 (214)
.|||++|+++|++++.. +.+ .||+++|+++|.||+||||+||.|++.|.||++||++||+|+|.|+ +||||
T Consensus 2 ~rr~~~e~~~l~~~~~~---~~~-~d~~~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~~pP~v~F~t~--i~HPnI~~ 75 (158)
T d1yf9a1 2 NRRREMDYMRLCNSTRK---VYP-SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNR--ILHPNVDE 75 (158)
T ss_dssp CHHHHHHHHHHHSSSSC---EEE-CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC--CCBTTBCT
T ss_pred chHHHHHHHHHhcCCCc---CCC-CCCceEEEEEEECCCCCCccCcEEEEEEECcccchhhceeEEecCC--CCCCCCcc
Confidence 58999999999987754 444 4799999999999999999999999999999999999999999998 89975
Q ss_pred --CceeeecCCCCCCCCcCcccHHHHHHHHHHhhcc
Q psy818 86 --TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119 (214)
Q Consensus 86 --g~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~ 119 (214)
|.+|++++. ++|++.+++..++..++..|..
T Consensus 76 ~~G~vcl~il~---~~W~p~~~i~~il~~~i~~ll~ 108 (158)
T d1yf9a1 76 RSGSVCLDVIN---QTWTPMYQLENIFDVFLPQLLR 108 (158)
T ss_dssp TTCBBCHHHHH---HHCCTTCCTHHHHHTHHHHHHH
T ss_pred Ccccccccccc---cccCchHhhhhHHHHHHHHHhc
Confidence 899998764 6799999999888776655443
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.81 E-value=1.6e-21 Score=153.86 Aligned_cols=113 Identities=16% Similarity=0.204 Sum_probs=95.2
Q ss_pred eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhh
Q psy818 90 LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCE 153 (214)
Q Consensus 90 ~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e 153 (214)
.++.+++.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.+|+++++ .|
T Consensus 99 ~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK~al~~lt~~la----~e 174 (240)
T d2bd0a1 99 GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMR----LY 174 (240)
T ss_dssp CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH----HH
T ss_pred CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHHHHHHHHHHHHH----HH
Confidence 457788889999999999 77999999998754 899999876 89999999999999999 78
Q ss_pred hCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCCccccC
Q psy818 154 LFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQVS 213 (214)
Q Consensus 154 ~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~i~ 213 (214)
+.+. |||+|+||.++|+++.....+. . ...++|||||++|+||+|.|++..+.
T Consensus 175 l~~~gIrvn~i~PG~v~T~~~~~~~~~~-~------~~~~~PedvA~~v~~l~s~~~~~~~~ 229 (240)
T d2bd0a1 175 ARKCNVRITDVQPGAVYTPMWGKVDDEM-Q------ALMMMPEDIAAPVVQAYLQPSRTVVE 229 (240)
T ss_dssp HTTTTEEEEEEEECCBCSTTTCCCCSTT-G------GGSBCHHHHHHHHHHHHTSCTTEEEE
T ss_pred hCcCCeEEEEeeeCcccCchhhhcCHhh-H------hcCCCHHHHHHHHHHHHcCCccCccC
Confidence 8775 9999999999999986532211 1 23579999999999999999887654
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=5e-21 Score=152.22 Aligned_cols=125 Identities=20% Similarity=0.237 Sum_probs=97.2
Q ss_pred CceecCCCceeeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLCLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|..-...++++.++|+.++++| .+++.++++|.+++ ++++|.++. .|+++|+|+.+|
T Consensus 90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~l 169 (255)
T d1fmca_ 90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL 169 (255)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHH
Confidence 43455433222234477788999999999 67899999998765 788998876 899999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCC---CCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p 207 (214)
+++++ .|+++. |||+|+||.++|++......++.........| +++|||||++++||+|..
T Consensus 170 t~~lA----~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~ 235 (255)
T d1fmca_ 170 VRNMA----FDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA 235 (255)
T ss_dssp HHHHH----HHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHH----HHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999 888776 99999999999998876554443333333333 569999999999999854
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.79 E-value=7.6e-21 Score=150.24 Aligned_cols=124 Identities=15% Similarity=0.224 Sum_probs=96.6
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++| |+++ ..++.+++.++|+.++++| .++++++|+|++++ +|++|+++. .|+++|+|+.
T Consensus 81 DiLVn-nAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~ 159 (244)
T d1edoa_ 81 DVVVN-NAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI 159 (244)
T ss_dssp SEEEE-CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred Ccccc-ccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence 44555 3333 2357788889999999999 77999999997754 899999866 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+++++ .|+++. |||+|+||+++|++.+... ++......... ++++|||||++++|||..|.
T Consensus 160 ~ltk~lA----~el~~~gIrvN~I~PG~i~T~~~~~~~-~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~ 227 (244)
T d1edoa_ 160 GFSKTAA----REGASRNINVNVVCPGFIASDMTAKLG-EDMEKKILGTIPLGRTGQPENVAGLVEFLALSPA 227 (244)
T ss_dssp HHHHHHH----HHHHTTTEEEEEEEECSBCSHHHHTTC-HHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSG
T ss_pred HChHHHH----HHHhhhCcEEEEEecceeccHHHHHhh-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCch
Confidence 9999999 888776 9999999999999886532 22223232222 35699999999999985543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.79 E-value=5.9e-21 Score=152.12 Aligned_cols=113 Identities=17% Similarity=0.258 Sum_probs=76.8
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
++++++.++|+.++++| .++++++|+|++++ +|++|+++. .|+++|+|+.+|+++++ .|+
T Consensus 101 ~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA----~e~ 176 (259)
T d1xq1a_ 101 PTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA----CEW 176 (259)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHHHHH----HHH
T ss_pred chhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchhhhhHHHH----HHh
Confidence 47788889999999999 67899999998754 899999876 89999999999999999 888
Q ss_pred Ccc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 155 FPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 155 ~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
++. |||+|+||.++|++......++........ .++++|||||++++||+|..
T Consensus 177 ~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~ 234 (259)
T d1xq1a_ 177 ASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPA 234 (259)
T ss_dssp GGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGG
T ss_pred cccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence 876 999999999999988654433322222222 23569999999999999854
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.78 E-value=1.7e-20 Score=148.77 Aligned_cols=125 Identities=17% Similarity=0.194 Sum_probs=96.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+++.++|+.++++| .++++++|+|++++ ++++|.++. .|+++|+|+.
T Consensus 85 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~ 164 (251)
T d1vl8a_ 85 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVA 164 (251)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhHH
Confidence 4455543322 2347788889999999999 77999999998765 788886543 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
+|+++++ .|+.+. |||+|+||+++|++.+....+... ....... ++++|||||++++||+|..
T Consensus 165 ~lt~~lA----~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~ 233 (251)
T d1vl8a_ 165 SLTKALA----KEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEE 233 (251)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGG
T ss_pred HHHHHHH----HHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence 9999999 888875 999999999999987654433222 2232333 3569999999999999854
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.78 E-value=1.8e-20 Score=147.48 Aligned_cols=125 Identities=10% Similarity=0.165 Sum_probs=94.3
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+.+.++|+.++++| .+++++++.|++++ +|++|.++. .|+++|+|+.+
T Consensus 75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 154 (237)
T d1uzma1 75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIG 154 (237)
T ss_dssp SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHH
T ss_pred eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHH
Confidence 44555434222 347788889999999999 67899999998876 899999876 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh---CCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
|+++++ .|+.+. |||+|+||.++|++.+.. .+......... .++++|||||++++||+|..+
T Consensus 155 lt~~lA----~e~~~~gIrVN~I~PG~v~T~~~~~~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s 221 (237)
T d1uzma1 155 MARSIA----RELSKANVTANVVAPGYIDTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDA 221 (237)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHHS-CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----hhhhcCCceeeeeeeCcCCChhhhcc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 999999 888776 999999999999987643 22222222222 235699999999999998643
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.78 E-value=1.1e-20 Score=149.66 Aligned_cols=124 Identities=16% Similarity=0.219 Sum_probs=88.3
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++| |+++. .++.+++.++|+.++++| .++++++|.|++++ +|++|.++. .|+++|+|+.
T Consensus 82 DilVn-nAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~ 160 (247)
T d2ew8a1 82 DILVN-NAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANI 160 (247)
T ss_dssp CEEEE-CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHH
T ss_pred CEEEE-CCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHH
Confidence 44555 44443 347788889999999999 77999999998765 899999876 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHH----hhCCCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLY----EAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~----~~~~~~~pedvA~~v~fl~s~p 207 (214)
+|+++++ .|+++. |||+|+||.++|++.+............ ...++++|||||++++||+|..
T Consensus 161 ~ltk~lA----~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~ 229 (247)
T d2ew8a1 161 GFTRALA----SDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD 229 (247)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGG
T ss_pred HHHHHHH----HHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCch
Confidence 9999999 888876 9999999999999876533222111111 1123569999999999999854
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.78 E-value=1.7e-20 Score=149.63 Aligned_cols=126 Identities=17% Similarity=0.217 Sum_probs=96.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+++.++|+.++++| .++++++|.|++++ ++++|.++. .|+++|+|+.
T Consensus 87 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal~ 166 (261)
T d1geea_ 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMK 166 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccch
Confidence 4455543321 2357788889999999999 67899999997764 578998876 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+++++ .|+++. |||+|+||.++|++......++.. ....... ++++|||||++|+||+|..+
T Consensus 167 ~lt~~lA----~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s 236 (261)
T d1geea_ 167 LMTETLA----LEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236 (261)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred hhHHHHH----HHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence 9999999 888876 999999999999987654322222 2222222 25699999999999998543
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=6.3e-21 Score=150.61 Aligned_cols=124 Identities=18% Similarity=0.315 Sum_probs=97.0
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++| |+++. .++.+++.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.
T Consensus 80 DilVn-nAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~ 158 (243)
T d1q7ba_ 80 DILVN-NAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLI 158 (243)
T ss_dssp SEEEE-CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred ceehh-hhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHH
Confidence 44455 33333 347788889999999999 77999999997754 899999866 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCC---CCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p~ 208 (214)
+|+++++ .|+++. |||+|+||.++|++..... ++.........| +++|||||++++||+|..+
T Consensus 159 ~lt~~lA----~ela~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s 226 (243)
T d1q7ba_ 159 GFSKSLA----REVASRGITVNVVAPGFIETDMTRALS-DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA 226 (243)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCCHHHHTSC-HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhCccCeEEEEEecceEechhhhhhh-hhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence 9999999 888876 9999999999999886543 222222323333 5699999999999998543
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.78 E-value=3e-20 Score=147.39 Aligned_cols=127 Identities=14% Similarity=0.096 Sum_probs=97.3
Q ss_pred CceecCCCce--eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL--CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i--c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+++.++|+..+++| .++++++|+|++++ +|++|.++. .|+++|+|+.
T Consensus 73 DiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~ 152 (252)
T d1zmta1 73 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGAC 152 (252)
T ss_dssp CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHH
Confidence 4455544422 2357788889999999999 67899999998754 899999876 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCc-------hhhHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD-------KFDKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~-------~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+++++ .|+++. |||+|+||.++|++....... +......... ++++|||||++++||+|..+
T Consensus 153 ~lt~~lA----~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s 228 (252)
T d1zmta1 153 TLANALS----KELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSC 228 (252)
T ss_dssp HHHHHHH----HHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHH----HHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 9999999 888876 999999999999987543321 1112222222 35699999999999999654
Q ss_pred c
Q psy818 209 H 209 (214)
Q Consensus 209 ~ 209 (214)
.
T Consensus 229 ~ 229 (252)
T d1zmta1 229 D 229 (252)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.77 E-value=4e-20 Score=146.65 Aligned_cols=126 Identities=18% Similarity=0.194 Sum_probs=95.8
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++| |+++. .++.+++.++|+.++++| .++++++|.|++++ +|++|+++. .|+++|+|+
T Consensus 84 DiLVn-nAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal 162 (251)
T d1zk4a1 84 STLVN-NAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162 (251)
T ss_dssp CEEEE-CCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred eEEEe-ccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHH
Confidence 44455 44333 347788889999999999 67899999998764 789999876 899999999
Q ss_pred HHHHhhccCcchhhhCc--ccccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 140 RSLRFNLNDKNFCELFP--DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~--~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
.+|+++++.| .++.+ .|||+|+||.++|++.+.....+......... ++++|||||++++||+|..
T Consensus 163 ~~lt~~lA~e--~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~ 233 (251)
T d1zk4a1 163 RIMSKSAALD--CALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE 233 (251)
T ss_dssp HHHHHHHHHH--HHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred hcchHHHHHH--HhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence 9999999933 22444 49999999999999987654433322222222 3569999999999999854
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.77 E-value=2.4e-20 Score=147.96 Aligned_cols=113 Identities=19% Similarity=0.269 Sum_probs=88.3
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
++.+.+.++|+.++++| .+++++++.|++++ ||++|+++. +|+++|+|+.+|+++++ .|+
T Consensus 102 ~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA----~el 177 (251)
T d2c07a1 102 LFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLA----KEL 177 (251)
T ss_dssp CTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHH----HHH
T ss_pred ccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHHHHHHHH----HHh
Confidence 46677778999999999 77899999998764 899999876 89999999999999999 888
Q ss_pred Ccc--cccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 155 FPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 155 ~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
++. |||+|+||+++|++..... ++......... ++++|||||++|+||+|..+
T Consensus 178 ~~~gIrVN~V~PG~v~T~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s 235 (251)
T d2c07a1 178 ASRNITVNAIAPGFISSDMTDKIS-EQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS 235 (251)
T ss_dssp GGGTEEEEEEEECSBCC-----CC-HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred hhhCeEEEEEccCCEecccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 876 9999999999999876532 32233333333 35699999999999998643
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.77 E-value=3.8e-20 Score=146.48 Aligned_cols=125 Identities=15% Similarity=0.184 Sum_probs=95.9
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++++++.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.+
T Consensus 78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ 157 (248)
T d2d1ya1 78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVN 157 (248)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHH
T ss_pred CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 4456643322 2357888889999999999 78999999998865 899999876 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC-----chhhHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG-----DKFDKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~-----~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
|+++++ .|+++. |||+|+||.++|++...... +.......... +.++|||||++|+||+|..
T Consensus 158 ltk~lA----~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~ 229 (248)
T d2d1ya1 158 LTRSLA----LDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK 229 (248)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999 888876 99999999999998754321 11112222222 3569999999999999854
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.77 E-value=3.1e-20 Score=148.01 Aligned_cols=125 Identities=14% Similarity=0.211 Sum_probs=90.5
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|... .++.+++.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.+
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 164 (260)
T d1x1ta1 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVG 164 (260)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred cEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhHHH
Confidence 44555444222 347778889999999999 67899999998765 899999876 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCc----------hhhHh-HHh---hCCCCChHhHHHHHHHHhc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD----------KFDKS-LYE---AHPCLQAEDIANTVEFILS 205 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~----------~~~~~-~~~---~~~~~~pedvA~~v~fl~s 205 (214)
|+++++ .|+++. |||+|+||+++|++.+..... ....+ ... ..+.++|||||++++||||
T Consensus 165 lt~~lA----~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S 240 (260)
T d1x1ta1 165 FTKVTA----LETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHHH----HHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred hHHHHH----HHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999 888776 999999999999987643211 00111 112 2235699999999999998
Q ss_pred CC
Q psy818 206 SP 207 (214)
Q Consensus 206 ~p 207 (214)
..
T Consensus 241 ~~ 242 (260)
T d1x1ta1 241 DA 242 (260)
T ss_dssp GG
T ss_pred hh
Confidence 54
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.77 E-value=5.2e-20 Score=146.57 Aligned_cols=113 Identities=16% Similarity=0.241 Sum_probs=91.8
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
++.+++.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.+|+++++ .|+
T Consensus 101 ~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA----~el 176 (259)
T d2ae2a_ 101 EAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA----FEW 176 (259)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH----HHT
T ss_pred ccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHHHHHHHHH----HHh
Confidence 47788889999999999 67899999998765 899999876 89999999999999999 888
Q ss_pred Ccc--cccccCccchhhhhccccCCchhh----HhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 155 FPD--LVQSISPGLVKSQIFKSSLGDKFD----KSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 155 ~~~--~vn~v~pg~~~t~~~~~~~~~~~~----~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
++. |||+|+||.++|++.+....+... ....... ++++|||||++++||+|..
T Consensus 177 ~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~ 238 (259)
T d2ae2a_ 177 AKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 238 (259)
T ss_dssp GGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred CcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 875 999999999999987654433211 2222222 3569999999999999854
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.76 E-value=4.4e-20 Score=144.92 Aligned_cols=126 Identities=18% Similarity=0.243 Sum_probs=98.0
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ..++.+++.++|+..+++| .+++++++.|++++ ++++|.++. .|+++|+|+.+
T Consensus 68 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ 147 (234)
T d1o5ia_ 68 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTG 147 (234)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred cEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHH
Confidence 4456644422 2347778889999999999 67899999998754 788888755 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCC---CCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p~ 208 (214)
|+++++ .|+++. |||+|+||+++|++......+..........| .++|||||++|+||+|..+
T Consensus 148 ltk~lA----~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s 215 (234)
T d1o5ia_ 148 FLKTLS----FEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKA 215 (234)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH----HHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence 999999 888876 99999999999998766554443333333333 5699999999999998543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.76 E-value=5e-20 Score=146.21 Aligned_cols=125 Identities=18% Similarity=0.115 Sum_probs=95.2
Q ss_pred CceecCCCcee-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~ 142 (214)
++++|+.|... .++.+++.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.+|
T Consensus 82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 161 (253)
T d1hxha_ 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSAL 161 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHHHHHH
Confidence 44555444222 347788889999999999 67999999998765 899999876 899999999999
Q ss_pred HhhccCcchhhhCc----ccccccCccchhhhhccccCCchhhHhHHhh-------CCCCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFP----DLVQSISPGLVKSQIFKSSLGDKFDKSLYEA-------HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~----~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~-------~~~~~pedvA~~v~fl~s~p 207 (214)
+++++ .|+.+ .|||+|+||.++|++.+....+....+.... .++++|||||++++||+|..
T Consensus 162 t~~lA----~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~ 233 (253)
T d1hxha_ 162 TRAAA----LSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDE 233 (253)
T ss_dssp HHHHH----HHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGG
T ss_pred HHHHH----HHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChh
Confidence 99999 77754 5999999999999987654332222211111 12458999999999999854
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.76 E-value=5.6e-20 Score=145.16 Aligned_cols=110 Identities=25% Similarity=0.312 Sum_probs=90.3
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhh
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCEL 154 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~ 154 (214)
++.+++.++|+.++++| .+++++++.|++++ +|++|.++. .|+++|+|+.+|+++++ .|+
T Consensus 95 ~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA----~el 170 (244)
T d1nffa_ 95 TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTA----LEL 170 (244)
T ss_dssp CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH----HHH
T ss_pred chhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHHHHHH----HHh
Confidence 47788889999999999 67889999998764 899999976 89999999999999999 888
Q ss_pred Ccc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 155 FPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 155 ~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
++. |||+|+||.++|++.+...... . .....++++|||||++|+||+|..
T Consensus 171 ~~~gIrVN~I~PG~i~T~~~~~~~~~~--~-~~pl~R~~~p~diA~~v~fL~s~~ 222 (244)
T d1nffa_ 171 GPSGIRVNSIHPGLVKTPMTDWVPEDI--F-QTALGRAAEPVEVSNLVVYLASDE 222 (244)
T ss_dssp GGGTEEEEEEEECCBCSGGGTTSCTTC--S-CCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred cccCEEEEEEeeCCccChhHhhhhHHH--H-hccccCCCCHHHHHHHHHHHhChh
Confidence 876 9999999999999876432111 1 112223579999999999999854
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=3.3e-20 Score=147.02 Aligned_cols=124 Identities=14% Similarity=0.134 Sum_probs=95.3
Q ss_pred CceecCCCce-e-eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-C-LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c-~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. . .++.+++.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.+
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ 160 (250)
T d1ydea1 81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTA 160 (250)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhhHHH
Confidence 4456654432 2 236677889999999999 67999999998754 899999875 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCC---ch--hhHhHHhhC---CCCChHhHHHHHHHHhcC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG---DK--FDKSLYEAH---PCLQAEDIANTVEFILSS 206 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~---~~--~~~~~~~~~---~~~~pedvA~~v~fl~s~ 206 (214)
|+++++ .|+++. |||+|+||.++|++.+.... +. ...+..... ++++|||||++++||+|.
T Consensus 161 lt~~lA----~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd 231 (250)
T d1ydea1 161 MTKALA----LDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE 231 (250)
T ss_dssp HHHHHH----HHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 999999 888876 99999999999998754321 11 112222222 356999999999999984
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.75 E-value=6.4e-20 Score=145.97 Aligned_cols=125 Identities=19% Similarity=0.252 Sum_probs=94.4
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++.+++.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~ 164 (258)
T d1iy8a_ 85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVV 164 (258)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHH
T ss_pred CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHHHH
Confidence 44455433222 246778889999999999 67899999998654 899999876 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCC----c--h-hhHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG----D--K-FDKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~----~--~-~~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
+|+++++ .|+.+. |||+|+||.++|++...... + . ......... ++++|||||++++||+|..
T Consensus 165 ~lt~~lA----~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~ 239 (258)
T d1iy8a_ 165 GLTRNSA----VEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD 239 (258)
T ss_dssp HHHHHHH----HHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHH----HHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 9999999 888876 99999999999998754321 1 1 112222222 2569999999999999854
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=1.6e-19 Score=142.60 Aligned_cols=125 Identities=14% Similarity=0.201 Sum_probs=96.0
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhcc-CC----CCCCCCcCc-------HHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVE-RS----PTLGSIEMS-------DYERRQLAA 139 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~-~~----v~i~S~a~~-------~Y~a~K~a~ 139 (214)
++++|+ +++. .++.+++.++|+.++++| .+++++++.|.+ ++ ++++|.++. .|+++|+|+
T Consensus 78 DilVnn-Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal 156 (244)
T d1pr9a_ 78 DLLVNN-AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGAL 156 (244)
T ss_dssp CEEEEC-CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred eEEEec-cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHH
Confidence 445554 3332 357788889999999999 678999986643 22 789999876 899999999
Q ss_pred HHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 140 RSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 140 ~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
.+++++++ .|+++. |||+|+||.++|++.+....+... ....... ++++|||||++|+||+|..+
T Consensus 157 ~~lt~~lA----~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a 227 (244)
T d1pr9a_ 157 DMLTKVMA----LELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227 (244)
T ss_dssp HHHHHHHH----HHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHH----HHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999 888875 999999999999998765544333 2222322 35699999999999998543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.75 E-value=1.1e-19 Score=143.42 Aligned_cols=126 Identities=21% Similarity=0.292 Sum_probs=96.8
Q ss_pred CCceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccC---C--CCCCCCcCc-------HHHHHHHH
Q psy818 78 PNGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER---S--PTLGSIEMS-------DYERRQLA 138 (214)
Q Consensus 78 ~~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~---~--v~i~S~a~~-------~Y~a~K~a 138 (214)
.++++|+.| +. .++.+++.++|+.++++| .+++++.+.|..+ + ++++|.++. .|+++|+|
T Consensus 75 iDilVnnAg-~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa 153 (242)
T d1cyda_ 75 VDLLVNNAA-LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGA 153 (242)
T ss_dssp CSEEEECCC-CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CeEEEECCc-cccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHH
Confidence 355566443 33 357788889999999999 6788899876543 2 789998866 89999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchh-hHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF-DKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+.+|+++++ .|+++. |||+|+||.++|++......++. ........ ++++|||||++|+||+|..+
T Consensus 154 l~~lt~~lA----~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s 225 (242)
T d1cyda_ 154 MTMLTKAMA----MELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRS 225 (242)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHH----HHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 999999999 888886 99999999999998865544332 22232333 35699999999999998643
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.75 E-value=2.7e-19 Score=141.00 Aligned_cols=123 Identities=17% Similarity=0.210 Sum_probs=93.6
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~------~Y~a~K~a~~~ 141 (214)
++++| |+++. .++.+++.++|+.++++| .++++++|.|++++ ++++|.+.. .|+++|+|+.+
T Consensus 79 DilVn-nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~asKaal~~ 157 (242)
T d1ulsa_ 79 DGVVH-YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVG 157 (242)
T ss_dssp CEEEE-CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHHHH
T ss_pred eEEEE-CCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHHHHHHHH
Confidence 44555 44443 347788889999999999 67899999998876 445554422 89999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCC---CCChHhHHHHHHHHhcCC
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p 207 (214)
|+++++ .|+++. |||+|+||.++|++.... .+..........| +++|||||++|+||+|..
T Consensus 158 ltk~lA----~ela~~gIrVN~I~PG~v~T~~~~~~-~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~ 223 (242)
T d1ulsa_ 158 LTRTLA----LELGRWGIRVNTLAPGFIETRMTAKV-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE 223 (242)
T ss_dssp HHHHHH----HHHGGGTEEEEEEEECSBCCTTTSSS-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH----HHHhhhCcEEEEEeeCcccChhhhcC-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchh
Confidence 999999 888886 999999999999987653 2222233333333 569999999999999854
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.74 E-value=7.8e-20 Score=145.11 Aligned_cols=123 Identities=16% Similarity=0.200 Sum_probs=94.9
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++| |+++. .++.+.+.++|+.++++| .++++++|+|++++ |+++|.++. .|+++|+|+.
T Consensus 81 DilVn-nAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~ 159 (254)
T d1hdca_ 81 DGLVN-NAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVR 159 (254)
T ss_dssp CEEEE-CCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred cEEEe-cCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHH
Confidence 44555 44443 346778889999999999 77999999998765 899999976 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhC---CCC-ChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCL-QAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~-~pedvA~~v~fl~s~p 207 (214)
+|+++++ .|+++. |||+|+||.++|++......+. ........ +++ +|||||++++||+|..
T Consensus 160 ~lt~~lA----~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~-~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~ 227 (254)
T d1hdca_ 160 GLSKLAA----VELGTDRIRVNSVHPGMTYTPMTAETGIRQ-GEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT 227 (254)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCCHHHHHHTCCC-STTSCTTSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred HHHHHHH----HHhCCCceEEEEeeeCcccCccchhcCHHH-HHHHHhCCCCCCCCCCHHHHHHHHHHHhchh
Confidence 9999999 888876 9999999999999876433221 11111222 233 7999999999999854
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.74 E-value=2.8e-19 Score=142.91 Aligned_cols=125 Identities=21% Similarity=0.216 Sum_probs=94.2
Q ss_pred CceecCCCceee---ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHH
Q psy818 79 NGRFKTNTRLCL---SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic~---~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a 138 (214)
++++|+.|.... .+.+.+.++|+.++++| .++++++++|++++ ++++|.++. .|+++|+|
T Consensus 84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaa 163 (268)
T d2bgka1 84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHA 163 (268)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHH
T ss_pred ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHH
Confidence 445554443221 25677778999999999 77899999998765 788887754 79999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchh--hHhHHh-h----CCCCChHhHHHHHHHHhcCC
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKF--DKSLYE-A----HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~--~~~~~~-~----~~~~~pedvA~~v~fl~s~p 207 (214)
+.+|+++++ .|+++. |||+|+||.++|++......... ...... . .++++|||||++++||+|..
T Consensus 164 l~~lt~~lA----~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~ 237 (268)
T d2bgka1 164 VLGLTTSLC----TELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE 237 (268)
T ss_dssp HHHHHHHHH----HHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred HHhCHHHHH----HHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChh
Confidence 999999999 888876 99999999999998866543221 111111 1 23569999999999999854
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.74 E-value=1.2e-19 Score=144.29 Aligned_cols=124 Identities=14% Similarity=0.201 Sum_probs=93.1
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhh--ccCC----CCCCCCcCc-------HHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFM--VERS----PTLGSIEMS-------DYERRQLA 138 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m--~~~~----v~i~S~a~~-------~Y~a~K~a 138 (214)
++++|+ +++. .++.+++.++|+.++++| .++++++|+| .+++ +|++|.++. .|+++|+|
T Consensus 81 DilVnn-AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaa 159 (257)
T d2rhca1 81 DVLVNN-AGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG 159 (257)
T ss_dssp SEEEEC-CCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CEEEec-ccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHH
Confidence 445554 3333 347788889999999999 6789999974 4443 788998866 89999999
Q ss_pred HHHHHhhccCcchhhhCcc--cccccCccchhhhhccccC---------C-chhhHhHHhhC---CCCChHhHHHHHHHH
Q psy818 139 ARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL---------G-DKFDKSLYEAH---PCLQAEDIANTVEFI 203 (214)
Q Consensus 139 ~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~---------~-~~~~~~~~~~~---~~~~pedvA~~v~fl 203 (214)
+.+|+++++ .|+++. |||+|+||+++|++..... . ++......... ++++|||||++|+||
T Consensus 160 l~~ltk~lA----~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL 235 (257)
T d2rhca1 160 VVGFTKALG----LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 235 (257)
T ss_dssp HHHHHHHHH----HHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999 888876 9999999999999865321 1 11112222222 356999999999999
Q ss_pred hcCC
Q psy818 204 LSSP 207 (214)
Q Consensus 204 ~s~p 207 (214)
+|..
T Consensus 236 ~S~~ 239 (257)
T d2rhca1 236 IGPG 239 (257)
T ss_dssp TSGG
T ss_pred hCch
Confidence 9854
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.74 E-value=2.8e-19 Score=141.97 Aligned_cols=125 Identities=14% Similarity=0.172 Sum_probs=93.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+++.++|+.++++| .++++++|+|.+++ ++++|.++. .|+++|+|+.
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~ 159 (255)
T d1gega_ 80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 159 (255)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHH
Confidence 3345543321 2357788889999999999 67889999876543 788998865 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCC----------chhhHhHHhh---CCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG----------DKFDKSLYEA---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~----------~~~~~~~~~~---~~~~~pedvA~~v~fl~s 205 (214)
+|+++++ .|+++. |||+|+||.++|+++..... .......... .++++|||||++++||+|
T Consensus 160 ~ltk~lA----~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S 235 (255)
T d1gega_ 160 GLTQTAA----RDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLAS 235 (255)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred hhHHHHH----HHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999 888876 99999999999998653211 1111112222 235699999999999998
Q ss_pred CC
Q psy818 206 SP 207 (214)
Q Consensus 206 ~p 207 (214)
..
T Consensus 236 ~~ 237 (255)
T d1gega_ 236 PD 237 (255)
T ss_dssp GG
T ss_pred ch
Confidence 54
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.73 E-value=2.3e-19 Score=142.90 Aligned_cols=125 Identities=17% Similarity=0.224 Sum_probs=94.9
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|... .++++++.++|+.++++| .++++++|.|.+++ ||++|.++. .|+++|+|+.
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~ 163 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAII 163 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHH
Confidence 34555545332 357888889999999999 67899999997654 899999865 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccC--------------Cchhh-HhHHhhC---CCCChHhHHHHH
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL--------------GDKFD-KSLYEAH---PCLQAEDIANTV 200 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~--------------~~~~~-~~~~~~~---~~~~pedvA~~v 200 (214)
+|+++++ .|+++. |||+|+||.++|++..... ..+.. ....... ++++|||||+++
T Consensus 164 ~ltk~lA----~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v 239 (260)
T d1zema1 164 ALTETAA----LDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV 239 (260)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred HHHHHHH----HHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 9999999 888876 9999999999998753210 11111 2222222 356999999999
Q ss_pred HHHhcCC
Q psy818 201 EFILSSP 207 (214)
Q Consensus 201 ~fl~s~p 207 (214)
+||+|..
T Consensus 240 ~fL~S~~ 246 (260)
T d1zema1 240 AFLLGDD 246 (260)
T ss_dssp HHHHSGG
T ss_pred HHHhCch
Confidence 9999954
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.73 E-value=4.6e-19 Score=140.80 Aligned_cols=126 Identities=13% Similarity=0.197 Sum_probs=93.5
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhcc-C--C--CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVE-R--S--PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~-~--~--v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. ..++.+++.++|+..+++| .+++++++.|.+ + + +|++|.++. .|+++|+|+.
T Consensus 81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~ 160 (256)
T d1k2wa_ 81 DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVI 160 (256)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred cEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHH
Confidence 4455543422 2357778889999999999 668888887654 2 2 899999876 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccC----------CchhhHhHHhh---CCCCChHhHHHHHHHHhc
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL----------GDKFDKSLYEA---HPCLQAEDIANTVEFILS 205 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~----------~~~~~~~~~~~---~~~~~pedvA~~v~fl~s 205 (214)
+|+++++ .|+++. |||+|+||+++|++.+... .++........ .++++|||||++|+||+|
T Consensus 161 ~lt~~lA----~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S 236 (256)
T d1k2wa_ 161 SLTQSAG----LNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT 236 (256)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS
T ss_pred HHHHHHH----HHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999 888876 9999999999999864321 11112222222 235699999999999998
Q ss_pred CCC
Q psy818 206 SPP 208 (214)
Q Consensus 206 ~p~ 208 (214)
..+
T Consensus 237 ~~a 239 (256)
T d1k2wa_ 237 PEA 239 (256)
T ss_dssp GGG
T ss_pred chh
Confidence 543
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.72 E-value=1e-18 Score=140.05 Aligned_cols=110 Identities=15% Similarity=0.202 Sum_probs=84.7
Q ss_pred CCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 93 SDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 93 l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
.+.+.++|+.++++| .+++++++.|++++ ++++|.++. .|+++|+|+.+|+++++ .|+++
T Consensus 103 ~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asKaal~~ltk~lA----~ela~ 178 (274)
T d1xhla_ 103 TDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTA----IDLIQ 178 (274)
T ss_dssp GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHH----HHHGG
T ss_pred ccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhhhHHHHHHHHHH----HHHhH
Confidence 344567899999999 67999999998765 566666654 79999999999999999 88887
Q ss_pred c--cccccCccchhhhhccccCCchhh----HhHH-------hhCCCCChHhHHHHHHHHhcC
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGDKFD----KSLY-------EAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~~~~----~~~~-------~~~~~~~pedvA~~v~fl~s~ 206 (214)
. |||+|+||.++|++.......... .... +..++++|||||++|+||+|.
T Consensus 179 ~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~ 241 (274)
T d1xhla_ 179 HGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR 241 (274)
T ss_dssp GTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCH
T ss_pred hCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCC
Confidence 6 999999999999987654322111 1111 112256999999999999985
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.72 E-value=3.1e-19 Score=142.42 Aligned_cols=112 Identities=19% Similarity=0.197 Sum_probs=81.0
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcC-c-------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEM-S-------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~-~-------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
+.+.+.++|+.++++| .++++++|+|++++ ++++|.++ . .|+++|+|+.+|+++++ .|++
T Consensus 105 ~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA----~el~ 180 (264)
T d1spxa_ 105 GTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTA----IDLI 180 (264)
T ss_dssp ---CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHH----HHHG
T ss_pred cccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhhhhhhhhHHHHHHHHH----HHhc
Confidence 3445667899999999 67899999998764 66666543 3 79999999999999999 8888
Q ss_pred cc--cccccCccchhhhhccccCCchh--------hHhHHh---hCCCCChHhHHHHHHHHhcCC
Q psy818 156 PD--LVQSISPGLVKSQIFKSSLGDKF--------DKSLYE---AHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 156 ~~--~vn~v~pg~~~t~~~~~~~~~~~--------~~~~~~---~~~~~~pedvA~~v~fl~s~p 207 (214)
+. |||+|+||.++|++.......+. ...... ..++++|||||++|+||+|.+
T Consensus 181 ~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~ 245 (264)
T d1spxa_ 181 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRK 245 (264)
T ss_dssp GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred ccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence 76 99999999999998754321111 111112 223669999999999999965
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=5.9e-19 Score=142.28 Aligned_cols=115 Identities=20% Similarity=0.204 Sum_probs=86.2
Q ss_pred eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhh
Q psy818 90 LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCE 153 (214)
Q Consensus 90 ~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e 153 (214)
.++.+.+.++|+.++++| .++++++|.|++++ +|++|+++. .|+++|+|+.+|+++|+ .|
T Consensus 97 ~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~l~~~la----~E 172 (285)
T d1jtva_ 97 GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA----VL 172 (285)
T ss_dssp SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHH----HH
T ss_pred ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHHHHHHHHHHH----HH
Confidence 346677889999999999 67999999998754 899999876 79999999999999999 78
Q ss_pred hCcc--cccccCccchhhhhccccCCchh----------hHhH---------HhhCCCCChHhHHHHHHHHhcCCC
Q psy818 154 LFPD--LVQSISPGLVKSQIFKSSLGDKF----------DKSL---------YEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 154 ~~~~--~vn~v~pg~~~t~~~~~~~~~~~----------~~~~---------~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+.+. |||+|+||.++|++.+....... .... ......++|||||++|+|+++.++
T Consensus 173 l~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~ 248 (285)
T d1jtva_ 173 LLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK 248 (285)
T ss_dssp HGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred hhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCC
Confidence 8775 99999999999998765432210 0000 011125799999999999998763
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.70 E-value=1.5e-18 Score=138.01 Aligned_cols=121 Identities=15% Similarity=0.223 Sum_probs=88.5
Q ss_pred cCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHh
Q psy818 83 KTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRF 144 (214)
Q Consensus 83 h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~ 144 (214)
.+|++++ .++.+++.++|+.++++| .+++++++.|.+++ ++++|.++. .|+++|+|+.+|++
T Consensus 89 innag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~lt~ 168 (258)
T d1ae1a_ 89 VNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTK 168 (258)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred eccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHH
Confidence 3344443 347778889999999999 66889999998765 788999876 89999999999999
Q ss_pred hccCcchhhhCcc--cccccCccchhhhhccccCCc-----hhhHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 145 NLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD-----KFDKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 145 ~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~-----~~~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
.++ .|+++. |||+|+||.++|++....... +......... +.++|||||++++||+|..
T Consensus 169 ~lA----~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~ 237 (258)
T d1ae1a_ 169 SLA----CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPA 237 (258)
T ss_dssp HHH----HHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHH----HhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence 999 888886 999999999999987654322 1222222223 3569999999999999854
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.4e-18 Score=136.63 Aligned_cols=129 Identities=24% Similarity=0.305 Sum_probs=96.4
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC----C--CCCCCCcCc---------HHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER----S--PTLGSIEMS---------DYERRQL 137 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~----~--v~i~S~a~~---------~Y~a~K~ 137 (214)
++++|+.|.. +.++.+++.++|+..+++| .+++++++.|+++ + ++++|.++. .|+++|+
T Consensus 91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKa 170 (257)
T d1xg5a_ 91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKY 170 (257)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHH
T ss_pred CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHHH
Confidence 4466654432 3468888899999999999 6688899988653 2 789988763 6999999
Q ss_pred HHHHHHhhccCcchhhh--Cc--ccccccCccchhhhhccccCCch--hhHhHHhhCCCCChHhHHHHHHHHhcCCCccc
Q psy818 138 AARSLRFNLNDKNFCEL--FP--DLVQSISPGLVKSQIFKSSLGDK--FDKSLYEAHPCLQAEDIANTVEFILSSPPHVQ 211 (214)
Q Consensus 138 a~~~~~~~l~~~~~~e~--~~--~~vn~v~pg~~~t~~~~~~~~~~--~~~~~~~~~~~~~pedvA~~v~fl~s~p~~~~ 211 (214)
|+.+|+++++ .|+ .+ .|||+|+||.++|++........ .........++++|||||++++||+|.++++.
T Consensus 171 al~~ltr~la----~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~~i 246 (257)
T d1xg5a_ 171 AVTALTEGLR----QELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQ 246 (257)
T ss_dssp HHHHHHHHHH----HHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTEE
T ss_pred HHHhCHHHHH----HHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhcCe
Confidence 9999999999 666 33 39999999999998876443221 12222333446799999999999999998764
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.70 E-value=2.2e-18 Score=138.01 Aligned_cols=110 Identities=17% Similarity=0.184 Sum_probs=82.8
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCC-CcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGS-IEMS-------DYERRQLAARSLRFNLNDKNFCELFPD 157 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S-~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~ 157 (214)
+.+.++|+.++++| .++++++|+|++++ |+++| .++. .|+++|+|+.+|+++++ .|+++.
T Consensus 107 d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA----~el~~~ 182 (272)
T d1xkqa_ 107 DQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTA----IDLAKF 182 (272)
T ss_dssp GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHH----HHHHTT
T ss_pred hccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhhhHHHHHHHHHHHHH----HHhccc
Confidence 34445699999999 67899999997654 55554 4544 79999999999999999 888776
Q ss_pred --cccccCccchhhhhccccCCchhh-H---hH----Hh---hCCCCChHhHHHHHHHHhcCC
Q psy818 158 --LVQSISPGLVKSQIFKSSLGDKFD-K---SL----YE---AHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 158 --~vn~v~pg~~~t~~~~~~~~~~~~-~---~~----~~---~~~~~~pedvA~~v~fl~s~p 207 (214)
|||+|+||+++|++.......+.. . .. .. ..++++|||||++++||+|..
T Consensus 183 gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~ 245 (272)
T d1xkqa_ 183 GIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRN 245 (272)
T ss_dssp TCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred CeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999987654332211 1 11 11 123559999999999999853
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.69 E-value=1.3e-18 Score=141.23 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=92.2
Q ss_pred CceecCCCcee--eecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRLC--LSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~ic--~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+ +++. .++.+++.++|+.++++| .++++++|+|++++ ||++|.++. .|+++|+|+.
T Consensus 92 DiLVnN-AGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~ 170 (302)
T d1gz6a_ 92 DVVVNN-AGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLL 170 (302)
T ss_dssp CEEEEC-CCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred CEEEEC-CccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHHHHHHHH
Confidence 445554 4443 357888889999999999 67999999998755 899999866 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+|+++++ .|+.+. |||+|+||.+.|.+.... .++ ..+ .++|||||++|+||||...
T Consensus 171 ~lt~~la----~E~~~~gIrVN~I~PG~~~t~~~~~~-~~~-~~~------~~~PedvA~~v~fL~S~~a 228 (302)
T d1gz6a_ 171 GLANTLV----IEGRKNNIHCNTIAPNAGSRMTETVM-PED-LVE------ALKPEYVAPLVLWLCHESC 228 (302)
T ss_dssp HHHHHHH----HHTGGGTEEEEEEEEECCSTTTGGGS-CHH-HHH------HSCGGGTHHHHHHHTSTTC
T ss_pred HHHHHHH----HHHhccCCceeeeCCCCCCcchhhcC-cHh-hHh------cCCHHHHHHHHHHHcCCCc
Confidence 9999999 777765 999999999987654321 111 111 3789999999999998543
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=3.3e-18 Score=138.54 Aligned_cols=125 Identities=14% Similarity=0.171 Sum_probs=91.2
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc------HHHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS------DYERRQLAARSL 142 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~------~Y~a~K~a~~~~ 142 (214)
++++|+.|.. ..++.+.+.++|+.++++| .+++++++.|.+++ ++++|.... .|+++|+|+.+|
T Consensus 96 DiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~~~~Y~asKaal~~l 175 (297)
T d1yxma1 96 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNL 175 (297)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHHHHHHHHHH
T ss_pred EEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccccccccchhHHHHHHHH
Confidence 3345533322 2347778889999999999 67899999998765 555443322 899999999999
Q ss_pred HhhccCcchhhhCcc--cccccCccchhhhhccccCCc---hhhHhHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 143 RFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGD---KFDKSLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 143 ~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~---~~~~~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++++ .|+++. |||+|+||.++|++....... +........ .++++|||||++|+||+|..
T Consensus 176 tk~lA----~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~ 244 (297)
T d1yxma1 176 TKSLA----LEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA 244 (297)
T ss_dssp HHHHH----HHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGG
T ss_pred HHHHH----HHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999 888876 999999999999987544321 111222222 23569999999999999854
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.67 E-value=2.5e-18 Score=137.94 Aligned_cols=106 Identities=15% Similarity=0.099 Sum_probs=81.5
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc-cccc
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD-LVQS 161 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~-~vn~ 161 (214)
+.|+.++++| .++++++|.|++++ ++++|.++. .|+++|+|+.+|+++++ .|+++. |||+
T Consensus 106 ~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~asKaal~~ltr~lA----~ela~~IrVN~ 181 (276)
T d1bdba_ 106 AAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELA----FELAPYVRVNG 181 (276)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHHHHHHHHHHHHHHHH----HHHTTTCEEEE
T ss_pred hhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHHHHHHHHHHHHHHHH----HHhhcceEEcc
Confidence 4599999999 77999999997654 778887765 79999999999999999 888876 9999
Q ss_pred cCccchhhhhccccCC--------chhhHhHHhh----CCCCChHhHHHHHHHHhcCC
Q psy818 162 ISPGLVKSQIFKSSLG--------DKFDKSLYEA----HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 162 v~pg~~~t~~~~~~~~--------~~~~~~~~~~----~~~~~pedvA~~v~fl~s~p 207 (214)
|+||.++|++...... .....+.... .++++|||||++++||+|.+
T Consensus 182 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~ 239 (276)
T d1bdba_ 182 VGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRG 239 (276)
T ss_dssp EEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHH
T ss_pred cCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence 9999999987643211 1111112222 22559999999999999853
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.67 E-value=5.6e-18 Score=134.73 Aligned_cols=113 Identities=15% Similarity=0.218 Sum_probs=85.9
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-----CCCCCCcC--------------cHHHHHHHHHHHHHhhc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-----PTLGSIEM--------------SDYERRQLAARSLRFNL 146 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-----v~i~S~a~--------------~~Y~a~K~a~~~~~~~l 146 (214)
++.+++.++|+.++++| .+++++.+.|.+++ ++++|... ..|+++|+|+.++++.+
T Consensus 102 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~l 181 (260)
T d1h5qa_ 102 PATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 181 (260)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHH
Confidence 46778889999999999 67899999985432 34344332 17999999999999999
Q ss_pred cCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 147 NDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 147 ~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
+ .|+++. |||+|+||.++|++.... .++......... ++++|||||++++||+|..+
T Consensus 182 A----~el~~~gIrvN~I~PG~i~T~~~~~~-~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s 243 (260)
T d1h5qa_ 182 A----AEWASAGIRVNALSPGYVNTDQTAHM-DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHA 243 (260)
T ss_dssp H----HHHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred H----HHhchhCeEEeecCCCcccCcchhcc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchh
Confidence 9 888876 999999999999987653 222222232322 35699999999999998543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=3.8e-18 Score=134.63 Aligned_cols=126 Identities=14% Similarity=0.261 Sum_probs=94.8
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc--------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS--------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~--------~Y~a~K~a~~ 140 (214)
++++|+.|.. +.++++++.++|+..+++| .+++++.++|.+++ ++++|.++. .|+++|+|+.
T Consensus 76 d~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~ 155 (245)
T d2ag5a1 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVI 155 (245)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHH
T ss_pred eeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHH
Confidence 4456644422 3457788889999999999 67899999887754 788887653 8999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccC----Cchh-hHhHHhhCC---CCChHhHHHHHHHHhcCCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSL----GDKF-DKSLYEAHP---CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~----~~~~-~~~~~~~~~---~~~pedvA~~v~fl~s~p~ 208 (214)
++++.++ .|+++. |||+|+||.++|++..... .... ........+ +++|||||++|+||+|..+
T Consensus 156 ~l~r~lA----~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s 229 (245)
T d2ag5a1 156 GLTKSVA----ADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDES 229 (245)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGG
T ss_pred HHHHHHH----HHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence 9999999 888886 9999999999998865321 1111 122222222 5699999999999999643
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.7e-17 Score=131.42 Aligned_cols=107 Identities=17% Similarity=0.233 Sum_probs=84.0
Q ss_pred CCCCcCcccHH-----HHHHHHHHhhccCC-------CCCCCCcCc-------HHHHHHHHHHHHHhh--ccCcchhhhC
Q psy818 97 PDTWNPAWSVS-----TILTGLLSFMVERS-------PTLGSIEMS-------DYERRQLAARSLRFN--LNDKNFCELF 155 (214)
Q Consensus 97 ~e~w~~~~~vn-----~~l~a~~~~m~~~~-------v~i~S~a~~-------~Y~a~K~a~~~~~~~--l~~~~~~e~~ 155 (214)
.++|+.++++| .+++.++++|.+++ +|++|.++. .|+++|+|+.+|+++ |+ .|+.
T Consensus 95 ~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs~ala----~e~~ 170 (254)
T d2gdza1 95 EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA----ANLM 170 (254)
T ss_dssp SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH----HHHH
T ss_pred cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHHHHHHH----HHhc
Confidence 36799999999 56889999997642 799999876 799999999999997 56 6777
Q ss_pred cc--cccccCccchhhhhccccCCchh-------h---HhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 156 PD--LVQSISPGLVKSQIFKSSLGDKF-------D---KSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 156 ~~--~vn~v~pg~~~t~~~~~~~~~~~-------~---~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
+. |||+|+||.++|++.+....+.. . .......++++|||||++|+||+|.+
T Consensus 171 ~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~ 234 (254)
T d2gdza1 171 NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD 234 (254)
T ss_dssp TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCC
Confidence 65 99999999999998765433211 1 11222334689999999999999964
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.67 E-value=2.8e-18 Score=136.08 Aligned_cols=113 Identities=22% Similarity=0.174 Sum_probs=83.0
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD 157 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~ 157 (214)
+.+.+.++|+..+++| .+++++.++|++.+ +|++|.++. .|+++|+|+.+++++++ .|+++.
T Consensus 106 ~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr~lA----~ela~~ 181 (256)
T d1ulua_ 106 YIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLA----YELGPK 181 (256)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHH----HHHGGG
T ss_pred hhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHHHHHHHHHHHHH----HHhccc
Confidence 5566667899999999 56788899998777 889998876 89999999999999999 888876
Q ss_pred --cccccCccchhhhhccccCCchh-hHhHHhhC---CCCChHhHHHHHHHHhcCCC
Q psy818 158 --LVQSISPGLVKSQIFKSSLGDKF-DKSLYEAH---PCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 158 --~vn~v~pg~~~t~~~~~~~~~~~-~~~~~~~~---~~~~pedvA~~v~fl~s~p~ 208 (214)
|||+|+||.++|++.......+. ........ +.++|||||++++||+|..+
T Consensus 182 gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s 238 (256)
T d1ulua_ 182 GVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLA 238 (256)
T ss_dssp TCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred CCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999999988765433222 22232333 35699999999999998543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.66 E-value=6e-18 Score=135.33 Aligned_cols=124 Identities=14% Similarity=0.179 Sum_probs=91.3
Q ss_pred eecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHHHh
Q psy818 81 RFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSLRF 144 (214)
Q Consensus 81 ~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~~~ 144 (214)
++|+.|.. ..++.+.+.++|+..+++| .+++++.++|.+++ ++++|..+. .|+++|+|+.++++
T Consensus 100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~ltk 179 (272)
T d1g0oa_ 100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFAR 179 (272)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHHHHHHHH
Confidence 44444322 2346677788999999999 67999999999887 566666543 79999999999999
Q ss_pred hccCcchhhhCcc--cccccCccchhhhhccccCC----------chhh-Hh-HHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 145 NLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLG----------DKFD-KS-LYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 145 ~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~----------~~~~-~~-~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
+++ .|+++. |||+|+||.++|++.+.... .+.. .. .... .++++|||||++|+||+|..
T Consensus 180 ~lA----~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~ 255 (272)
T d1g0oa_ 180 CMA----IDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASND 255 (272)
T ss_dssp HHH----HHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHH----HHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCch
Confidence 999 888776 99999999999998643211 1111 11 1111 23569999999999999854
Q ss_pred C
Q psy818 208 P 208 (214)
Q Consensus 208 ~ 208 (214)
+
T Consensus 256 s 256 (272)
T d1g0oa_ 256 G 256 (272)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.66 E-value=5.3e-18 Score=133.43 Aligned_cols=112 Identities=20% Similarity=0.225 Sum_probs=85.4
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc------HHHHHHHHHHHHHhhccCcchhhhCcc
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS------DYERRQLAARSLRFNLNDKNFCELFPD 157 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~------~Y~a~K~a~~~~~~~l~~~~~~e~~~~ 157 (214)
++.+.+.++|+.++++| .+++++.|.|.+++ ++++|.+.. .|+++|+|+.+|++.++ .|+++.
T Consensus 94 ~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y~~sK~al~~lt~~lA----~el~~~ 169 (241)
T d2a4ka1 94 LSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLA----LELARK 169 (241)
T ss_dssp C----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHHHHHHH----HHHTTT
T ss_pred chhhhhccccccccccccccccccccccccccccccceeeccccccccccCccccchhhHHHHHHHHHHH----HHHhHh
Confidence 46677888999999999 66899999998887 344444433 89999999999999999 888886
Q ss_pred --cccccCccchhhhhccccCCchhhHhHHhhCC---CCChHhHHHHHHHHhcCC
Q psy818 158 --LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 158 --~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~pedvA~~v~fl~s~p 207 (214)
|||+|+||.++|++.... .++.........+ .++|||||++++||+|..
T Consensus 170 gIrvN~I~PG~v~T~~~~~~-~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~ 223 (241)
T d2a4ka1 170 GVRVNVLLPGLIQTPMTAGL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEE 223 (241)
T ss_dssp TCEEEEEEECSBCCGGGTTS-CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred CCEEeeeccCcCCCHHHHhh-hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcch
Confidence 999999999999987643 2333333333333 559999999999999854
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.65 E-value=1.5e-17 Score=132.05 Aligned_cols=114 Identities=13% Similarity=0.119 Sum_probs=86.5
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
++.+.+.++|+..+++| .++++++++|++.+ ++++|..+. .|+++|+|+.+++++++ .|++
T Consensus 99 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~al~~l~r~lA----~e~~ 174 (259)
T d1ja9a_ 99 DELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFA----VDCG 174 (259)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHH----HHHG
T ss_pred ccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHHHHHHHHHHH----HHHh
Confidence 46667778999999999 67999999998776 445554432 89999999999999999 8888
Q ss_pred cc--cccccCccchhhhhccccC-----------CchhhHhHH-hh---CCCCChHhHHHHHHHHhcCCC
Q psy818 156 PD--LVQSISPGLVKSQIFKSSL-----------GDKFDKSLY-EA---HPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 156 ~~--~vn~v~pg~~~t~~~~~~~-----------~~~~~~~~~-~~---~~~~~pedvA~~v~fl~s~p~ 208 (214)
+. |||+|+||.++|++..... .++...+.. .. .++++|||||++++||+|..+
T Consensus 175 ~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a 244 (259)
T d1ja9a_ 175 AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEES 244 (259)
T ss_dssp GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred hcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 76 9999999999999864321 111112222 22 235699999999999999654
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.64 E-value=1.7e-17 Score=131.81 Aligned_cols=113 Identities=16% Similarity=0.139 Sum_probs=88.4
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC------CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhh
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS------PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCE 153 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~------v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e 153 (214)
+.+.+.++|+.++++| .++++++|+|++++ +|++|.++. .|+++|+|+.+|+++|+ .|
T Consensus 111 ~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la----~e 186 (259)
T d1oaaa_ 111 LNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLA----AE 186 (259)
T ss_dssp GGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH----HH
T ss_pred cccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccchHHHHHHHHHHHHHHHHH----hC
Confidence 5566778899999999 67899999998753 789999876 89999999999999999 66
Q ss_pred hCcccccccCccchhhhhccccC---Cch-hhH---hHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 154 LFPDLVQSISPGLVKSQIFKSSL---GDK-FDK---SLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 154 ~~~~~vn~v~pg~~~t~~~~~~~---~~~-~~~---~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
..+.|||+|+||.++|++..... .++ ... .......+++|||||++++||++..+
T Consensus 187 ~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~~s 248 (259)
T d1oaaa_ 187 EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDT 248 (259)
T ss_dssp CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhcc
Confidence 55559999999999999875321 111 111 12233346799999999999998643
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.6e-17 Score=130.89 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=82.0
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccC--------C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCc
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVER--------S--PTLGSIEMS-------DYERRQLAARSLRFNLNDK 149 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~--------~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~ 149 (214)
+.+.+.+.|+.++++| .+++++.++|..+ + +|++|+++. .|+++|+|+.+|+++++
T Consensus 101 ~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~la-- 178 (248)
T d2o23a1 101 GQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA-- 178 (248)
T ss_dssp TEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHH--
T ss_pred cccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHH--
Confidence 4455567899999999 6789999988653 1 789999865 89999999999999999
Q ss_pred chhhhCcc--cccccCccchhhhhccccCCchhhHhHHhh----CCCCChHhHHHHHHHHhcC
Q psy818 150 NFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEA----HPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 150 ~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~pedvA~~v~fl~s~ 206 (214)
.|+++. |||+|+||+++|++...... +........ .++++|||||++++||+|.
T Consensus 179 --~e~~~~gIrvN~I~PG~i~T~~~~~~~~-~~~~~~~~~~pl~~R~g~peevA~~v~fL~s~ 238 (248)
T d2o23a1 179 --RDLAPIGIRVMTIAPGLFGTPLLTSLPE-KVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN 238 (248)
T ss_dssp --HHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHC
T ss_pred --HHhcccCcceeeeccCceecchhhcCCH-HHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC
Confidence 888876 99999999999998765322 222222222 2356999999999999985
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.60 E-value=8.5e-17 Score=125.75 Aligned_cols=107 Identities=18% Similarity=0.137 Sum_probs=81.2
Q ss_pred CCCCCCcCcccHH-----HHHHHHHHh------hccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchh
Q psy818 95 FHPDTWNPAWSVS-----TILTGLLSF------MVERS----PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFC 152 (214)
Q Consensus 95 ~~~e~w~~~~~vn-----~~l~a~~~~------m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~ 152 (214)
...+.|+..+++| .+++.+.+. |.+++ +|++|.++. .|+++|+|+.+|+++++ .
T Consensus 88 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA----~ 163 (241)
T d1uaya_ 88 HGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAA----R 163 (241)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHH----H
T ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHHHHHHHHH----H
Confidence 3446788888888 456666666 33333 899998865 89999999999999999 8
Q ss_pred hhCcc--cccccCccchhhhhccccCCchhhHhHHhhC----CCCChHhHHHHHHHHhcC
Q psy818 153 ELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH----PCLQAEDIANTVEFILSS 206 (214)
Q Consensus 153 e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~----~~~~pedvA~~v~fl~s~ 206 (214)
|+++. |||+|+||.++|++....... ......... +.++|||||++++||+|.
T Consensus 164 ela~~gIrVN~V~PG~i~T~~~~~~~~~-~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~ 222 (241)
T d1uaya_ 164 ELAGWGIRVVTVAPGLFDTPLLQGLPEK-AKASLAAQVPFPPRLGRPEEYAALVLHILEN 222 (241)
T ss_dssp HHGGGTEEEEEEEECSCSSHHHHTSCHH-HHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred HHhhcCCceeeecCCcccccccchhhhh-HHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC
Confidence 88876 999999999999988654322 222222222 255999999999999995
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.59 E-value=3e-17 Score=134.66 Aligned_cols=76 Identities=20% Similarity=0.113 Sum_probs=65.5
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
++++++.++|+.++++| .++++++++|.+.+ ++++|.++. .|+++|+|+.+|++.++ .|++
T Consensus 130 ~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA----~Ela 205 (329)
T d1uh5a_ 130 DLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLA----YHLG 205 (329)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHH----HHHH
T ss_pred ChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhcccccccchhhhhhhccccccchhhH----HHHh
Confidence 56777888999999999 57899999998776 788877755 58999999999999999 8887
Q ss_pred c---ccccccCccchhhh
Q psy818 156 P---DLVQSISPGLVKSQ 170 (214)
Q Consensus 156 ~---~~vn~v~pg~~~t~ 170 (214)
| .|||+|+||+++|+
T Consensus 206 ~~~gIRVNaI~PG~i~T~ 223 (329)
T d1uh5a_ 206 RNYNIRINTISAGPLKSR 223 (329)
T ss_dssp HHHCCEEEEEEECCCCCT
T ss_pred cccCcEEEEEecCcccch
Confidence 5 39999999999994
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.58 E-value=7.5e-17 Score=126.31 Aligned_cols=118 Identities=11% Similarity=-0.011 Sum_probs=88.9
Q ss_pred eecCCCceee--ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHh
Q psy818 81 RFKTNTRLCL--SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRF 144 (214)
Q Consensus 81 ~~h~ng~ic~--~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~ 144 (214)
++|+.|.... .+.+.+.++|+.++++| .+++.++++|++.+ ++++|.++. .|+++|+|+.+|++
T Consensus 75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~ 154 (236)
T d1dhra_ 75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQ 154 (236)
T ss_dssp EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH
T ss_pred EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHHHHHH
Confidence 4554443222 23344557899999999 56889999998777 899999876 89999999999999
Q ss_pred hccCcchhhhC----cccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 145 NLNDKNFCELF----PDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 145 ~l~~~~~~e~~----~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+++ .|+. +.|||+|+||.++|++.+....+... .....|||||+.++||++...
T Consensus 155 ~la----~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~------~~~~~pe~va~~~~~l~s~~~ 212 (236)
T d1dhra_ 155 SLA----GKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADF------SSWTPLEFLVETFHDWITGNK 212 (236)
T ss_dssp HHT----STTSSCCTTCEEEEEEESCEECHHHHHHSTTSCG------GGSEEHHHHHHHHHHHHTTTT
T ss_pred HHH----HHhccCCCcEEEEEEEeccCcCCcchhhCccchh------hcCCCHHHHHHHHHHHhCCCc
Confidence 999 6665 23999999999999986543221111 123579999999999998654
|
| >d1s1qa_ d.20.1.2 (A:) Tumor susceptibility gene 101 (TSG101) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UEV domain domain: Tumor susceptibility gene 101 (TSG101) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=1.5e-15 Score=109.47 Aligned_cols=106 Identities=12% Similarity=0.206 Sum_probs=81.0
Q ss_pred HHHHHHHHHhcCCC---CCeEEeecCCCcccEEEEEECCCCCCCCCcEEEE--EEECCCCCCCCCCeEEEEcC-C--cee
Q psy818 11 RLKQDYMKLKKDPI---PYVIAEPNPANILEWFYVVIGPENTQYEGGMYLG--KLVFPRDFPFKPPSIYMITP-N--GRF 82 (214)
Q Consensus 11 rl~~e~~~l~~~~~---~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~--~i~fp~~YP~~pP~v~f~t~-~--~~~ 82 (214)
+..+|+.++.+..+ +...+...+++..+|.+.|.|+.+++|+||.|.+ .|-||.+||++||.|.|.+. + .++
T Consensus 18 ~~~~d~~~~l~~~~~l~p~~~~f~~~dg~~~~ll~l~G~~~~~y~g~~y~~pi~i~~p~~YP~~pP~v~~~pt~~~~~~~ 97 (141)
T d1s1qa_ 18 LTVRETVNVITLYKDLKPVLDSYVFNDGSSRELMNLTGTIPVPYRGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTIKT 97 (141)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEEECTTTTSSCCEEEECCCTTCEECC
T ss_pred hHHHHHHHHHHhCCCCCCccceEEeCCCCceEEEEEECCCCcccCCCEEEEEEEEECCccCCCCCCEEEEecCCCccccC
Confidence 45567777766543 4666777788899999999999999999999999 55589999999999988742 1 134
Q ss_pred c----CCCceeeecCCCCCCCCc-CcccHHHHHHHHHHhhccC
Q psy818 83 K----TNTRLCLSMSDFHPDTWN-PAWSVSTILTGLLSFMVER 120 (214)
Q Consensus 83 h----~ng~ic~~~l~~~~e~w~-~~~~vn~~l~a~~~~m~~~ 120 (214)
| +||.+|+++++ +|. +..++-.+++.+...+.+.
T Consensus 98 h~~V~~~G~V~lp~L~----~W~~~~s~L~~ll~~L~~~f~~e 136 (141)
T d1s1qa_ 98 GKHVDANGKIYLPYLH----EWKHPQSDLLGLIQVMIVVFGDE 136 (141)
T ss_dssp SSSBCTTCBBCCHHHH----TCCTTTCCHHHHHHHHHHHHHHS
T ss_pred CCeECCCCCCcchhhc----CCCcccccHHHHHHHHHHHhCCC
Confidence 4 46999999874 465 5567888888877766543
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=3.5e-16 Score=123.06 Aligned_cols=118 Identities=15% Similarity=0.161 Sum_probs=91.0
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARS 141 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~ 141 (214)
++++|+.|.. ...+.+.+.+.|+.++++| .++++++|.|.+++ ++++|.++. .|+++|+|+.+
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 165 (244)
T d1yb1a_ 86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVG 165 (244)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHH
T ss_pred ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHHH
Confidence 3345544432 2346666778899999999 77999999998876 899999987 79999999999
Q ss_pred HHhhccCcchhhhCc-----ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 142 LRFNLNDKNFCELFP-----DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~-----~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
|+++|+ .|+.+ .+||+|+||+++|++.+.. .....+.++|||||+.+.......+
T Consensus 166 ~~~~La----~El~~~~~~gI~V~~i~PG~v~T~~~~~~--------~~~~~~~~~pe~va~~i~~~~~~~~ 225 (244)
T d1yb1a_ 166 FHKTLT----DELAALQITGVKTTCLCPNFVNTGFIKNP--------STSLGPTLEPEEVVNRLMHGILTEQ 225 (244)
T ss_dssp HHHHHH----HHHHHTTCTTEEEEEEEETHHHHCSTTCT--------HHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHH----HHHHhhcCCCEEEEEEEcCCCCChhhhCc--------CccccCCCCHHHHHHHHHHHHhcCC
Confidence 999999 66644 4999999999999987531 1123345799999999988765543
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.53 E-value=1.6e-15 Score=119.91 Aligned_cols=108 Identities=16% Similarity=0.151 Sum_probs=84.1
Q ss_pred CCCCCcCcccHH-----HHHHHHHHhhccC-----C--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCc
Q psy818 96 HPDTWNPAWSVS-----TILTGLLSFMVER-----S--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFP 156 (214)
Q Consensus 96 ~~e~w~~~~~vn-----~~l~a~~~~m~~~-----~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~ 156 (214)
+.+.|+.++++| .+++++++.|.++ + +|++|.++. .|+++|+|+.+|+++|+ .++.+
T Consensus 96 ~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~~la----~el~~ 171 (254)
T d1sbya1 96 DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLA----KLAPI 171 (254)
T ss_dssp CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHH----HHHHH
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHHHHHH----hhccc
Confidence 458899999999 6789999999764 2 789999976 89999999999999999 77766
Q ss_pred c--cccccCccchhhhhccccCCc----hhhHhHHhhCCCCChHhHHHHHHHHhcCC
Q psy818 157 D--LVQSISPGLVKSQIFKSSLGD----KFDKSLYEAHPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 157 ~--~vn~v~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~pedvA~~v~fl~s~p 207 (214)
. |||+|+||+++|++.+..... ..........+..+||+||++++++++.-
T Consensus 172 ~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~ 228 (254)
T d1sbya1 172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEAN 228 (254)
T ss_dssp HSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHC
T ss_pred cCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCC
Confidence 4 999999999999987543221 11122223334568999999999888643
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.51 E-value=1.9e-15 Score=121.71 Aligned_cols=125 Identities=15% Similarity=0.173 Sum_probs=81.1
Q ss_pred CceecCCCce-eeecCCCCCCCCcCcccHH-----HHHHHHHHhhccC-C----CCCCCCcCc-------HHHHHHHHHH
Q psy818 79 NGRFKTNTRL-CLSMSDFHPDTWNPAWSVS-----TILTGLLSFMVER-S----PTLGSIEMS-------DYERRQLAAR 140 (214)
Q Consensus 79 ~~~~h~ng~i-c~~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-~----v~i~S~a~~-------~Y~a~K~a~~ 140 (214)
++++|+.|.. +.++.+.+.++|...+.+| .+++...+.+... + ++++|.++. .|+++|+|+.
T Consensus 105 DilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal~ 184 (294)
T d1w6ua_ 105 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVE 184 (294)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred chhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHHHH
Confidence 3344443322 2335556667888888888 3345544444432 2 556666543 7999999999
Q ss_pred HHHhhccCcchhhhCcc--cccccCccchhhhhccccCCch--hhHhHHhhC---CCCChHhHHHHHHHHhcCC
Q psy818 141 SLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDK--FDKSLYEAH---PCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 141 ~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~--~~~~~~~~~---~~~~pedvA~~v~fl~s~p 207 (214)
+|++.++ .++++. |||+|+||.++|++........ ......... ++++|||||++|+||+|..
T Consensus 185 ~ltk~lA----~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~ 254 (294)
T d1w6ua_ 185 AMSKSLA----AEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDY 254 (294)
T ss_dssp HHHHHHH----HHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHH----HHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCch
Confidence 9999999 888876 9999999999999876543322 222222222 3669999999999999854
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=1.3e-15 Score=120.40 Aligned_cols=106 Identities=15% Similarity=0.121 Sum_probs=79.4
Q ss_pred CCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc--cccc
Q psy818 98 DTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD--LVQS 161 (214)
Q Consensus 98 e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~ 161 (214)
+.|...++++ .+++++.+.|...+ ++++|.++. .|+++|+|+.+|++.++ .++++. |||+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sKaal~~ltr~lA----~el~~~gIrVN~ 185 (258)
T d1qsga_ 110 EGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMA----NAMGPEGVRVNA 185 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHH----HHHTTTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHHHHHHHHHHHHH----HHhCccCceeec
Confidence 4466666666 45667777776555 677777644 79999999999999999 888876 9999
Q ss_pred cCccchhhhhccccCCchhhH-hHHhh---CCCCChHhHHHHHHHHhcCC
Q psy818 162 ISPGLVKSQIFKSSLGDKFDK-SLYEA---HPCLQAEDIANTVEFILSSP 207 (214)
Q Consensus 162 v~pg~~~t~~~~~~~~~~~~~-~~~~~---~~~~~pedvA~~v~fl~s~p 207 (214)
|+||.++|++........... ..... .++++|||||++++||+|..
T Consensus 186 I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~ 235 (258)
T d1qsga_ 186 ISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL 235 (258)
T ss_dssp EEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred ccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999999876544333322 22222 23669999999999999854
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.47 E-value=2.1e-15 Score=117.78 Aligned_cols=105 Identities=11% Similarity=0.022 Sum_probs=80.6
Q ss_pred CCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhC--cc
Q psy818 94 DFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELF--PD 157 (214)
Q Consensus 94 ~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~--~~ 157 (214)
+...+.|+.++++| .+++.++++|++.+ ++++|.++. .|+++|+|+.+|+++++ .|+. +.
T Consensus 90 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la----~e~~~~~~ 165 (235)
T d1ooea_ 90 KDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLA----AKDSGLPD 165 (235)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHH----STTSSCCT
T ss_pred cCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHH----HHhccCCC
Confidence 33346799999998 56889999998776 889998865 89999999999999999 5654 23
Q ss_pred --cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 158 --LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 158 --~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+||+|+||.++|++.+....+... .....|||+|+.++++++.+.
T Consensus 166 ~i~v~~i~Pg~~~T~~~~~~~~~~~~------~~~~~~~~va~~~~~~l~~~~ 212 (235)
T d1ooea_ 166 NSAVLTIMPVTLDTPMNRKWMPNADH------SSWTPLSFISEHLLKWTTETS 212 (235)
T ss_dssp TCEEEEEEESCBCCHHHHHHSTTCCG------GGCBCHHHHHHHHHHHHHCGG
T ss_pred ceEEEEEecCcCcCcchhhhCcCCcc------ccCCCHHHHHHHHHHHhcCcc
Confidence 899999999999987543322111 124689999999987666543
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.45 E-value=2.2e-15 Score=121.28 Aligned_cols=113 Identities=22% Similarity=0.176 Sum_probs=84.0
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcCc--------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEMS--------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~~--------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
++++.+.++|+..+++| .+++++++.|..++ +.+++.++. .|+++|+++.++++.++ .+++
T Consensus 136 ~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a----~e~~ 211 (297)
T d1d7oa_ 136 PLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLA----FEAG 211 (297)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHH----HHHH
T ss_pred chhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhcccccccccceecccccccccccccc----hhcc
Confidence 46778888999999999 66888888888776 333333211 79999999999999999 6765
Q ss_pred -c--ccccccCccchhhhhccccCCchhh-HhHHhhCC---CCChHhHHHHHHHHhcCC
Q psy818 156 -P--DLVQSISPGLVKSQIFKSSLGDKFD-KSLYEAHP---CLQAEDIANTVEFILSSP 207 (214)
Q Consensus 156 -~--~~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~~~~---~~~pedvA~~v~fl~s~p 207 (214)
+ .|||+|+||.++|++.......+.. .......| +++|||||++|+||+|..
T Consensus 212 ~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~ 270 (297)
T d1d7oa_ 212 RKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPL 270 (297)
T ss_dssp HHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGG
T ss_pred ccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCch
Confidence 2 4999999999999987653322222 22223333 569999999999999854
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.43 E-value=3.8e-14 Score=113.06 Aligned_cols=123 Identities=14% Similarity=0.090 Sum_probs=71.9
Q ss_pred CceecCCCcee-eecCCCCCCCCcCc--------------ccHH-----HHHHHHHHhh------ccCC----CCCCCCc
Q psy818 79 NGRFKTNTRLC-LSMSDFHPDTWNPA--------------WSVS-----TILTGLLSFM------VERS----PTLGSIE 128 (214)
Q Consensus 79 ~~~~h~ng~ic-~~~l~~~~e~w~~~--------------~~vn-----~~l~a~~~~m------~~~~----v~i~S~a 128 (214)
++++|+.|... .++.+.+.++|+.. +++| .+++++.+.+ ...+ ++++|..
T Consensus 100 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~ 179 (284)
T d1e7wa_ 100 DVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 179 (284)
T ss_dssp CEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTT
T ss_pred CEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcCCCCccccccccc
Confidence 44555444322 24666666777753 4455 3345544433 2222 4555555
Q ss_pred Cc-------HHHHHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhC----CCCChHh
Q psy818 129 MS-------DYERRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAH----PCLQAED 195 (214)
Q Consensus 129 ~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~----~~~~ped 195 (214)
+. .|+++|+|+.++++.++ .|+++. |||+|+||++.+.... .+.......... ++++|||
T Consensus 180 ~~~~~~~~~~Y~asKaal~~lt~~lA----~el~~~gIrvN~I~PG~t~~~~~~---~~~~~~~~~~~~pl~~R~~~pee 252 (284)
T d1e7wa_ 180 TNQPLLGYTIYTMAKGALEGLTRSAA----LELAPLQIRVNGVGPGLSVLVDDM---PPAVWEGHRSKVPLYQRDSSAAE 252 (284)
T ss_dssp TTSCCTTCHHHHHHHHHHHHHHHHHH----HHHGGGTEEEEEEEESSBCCGGGS---CHHHHHHHHTTCTTTTSCBCHHH
T ss_pred ccCCccceeeeccccccchhhhHHHH----HHhCCccccccccccccccccccC---CHHHHHHHHhcCCCCCCCCCHHH
Confidence 43 89999999999999999 888876 9999999986543221 222222222222 3569999
Q ss_pred HHHHHHHHhcCCC
Q psy818 196 IANTVEFILSSPP 208 (214)
Q Consensus 196 vA~~v~fl~s~p~ 208 (214)
||++++||+|..+
T Consensus 253 iA~~v~fL~S~~s 265 (284)
T d1e7wa_ 253 VSDVVIFLCSSKA 265 (284)
T ss_dssp HHHHHHHHHSGGG
T ss_pred HHHHHHHHhCchh
Confidence 9999999998543
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=6.7e-15 Score=117.49 Aligned_cols=111 Identities=17% Similarity=0.188 Sum_probs=86.2
Q ss_pred eecCCCceeee--cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC--CCCCCCcC----------------------
Q psy818 81 RFKTNTRLCLS--MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS--PTLGSIEM---------------------- 129 (214)
Q Consensus 81 ~~h~ng~ic~~--~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~--v~i~S~a~---------------------- 129 (214)
++| |+++... ..+.+.++|+.++++| .+++.++|+|++++ +|++|+++
T Consensus 85 LVn-NAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~ 163 (275)
T d1wmaa1 85 LVN-NAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE 163 (275)
T ss_dssp EEE-CCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred EEE-cCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccch
Confidence 444 5555433 4445556899999999 67999999998877 88898653
Q ss_pred --------------------------cHHHHHHHHHHHHHhhccCcchhhhCc------ccccccCccchhhhhccccCC
Q psy818 130 --------------------------SDYERRQLAARSLRFNLNDKNFCELFP------DLVQSISPGLVKSQIFKSSLG 177 (214)
Q Consensus 130 --------------------------~~Y~a~K~a~~~~~~~l~~~~~~e~~~------~~vn~v~pg~~~t~~~~~~~~ 177 (214)
..|+++|+|+.++++.++ .++.+ .+||+|+||+++|++....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la----~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-- 237 (275)
T d1wmaa1 164 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHA----RKLSEQRKGDKILLNACCPGWVRTDMAGPK-- 237 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHH----HHHHHHCTTSCCEEEEEECCSBCSTTTCTT--
T ss_pred hhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHH----HHHHHHhCCCCeEEEEEecccccCCcccCc--
Confidence 159999999999999998 55533 3999999999999986431
Q ss_pred chhhHhHHhhCCCCChHhHHHHHHHHhcCCCc
Q psy818 178 DKFDKSLYEAHPCLQAEDIANTVEFILSSPPH 209 (214)
Q Consensus 178 ~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~~ 209 (214)
...+|||+|++++|++..|+.
T Consensus 238 -----------~~~~pee~A~~~~~~a~~~~~ 258 (275)
T d1wmaa1 238 -----------ATKSPEEGAETPVYLALLPPD 258 (275)
T ss_dssp -----------CSBCHHHHTHHHHHHHSCCTT
T ss_pred -----------ccCCHHHHHHHHHHHHcCChh
Confidence 135899999999999977654
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=1.8e-14 Score=114.59 Aligned_cols=106 Identities=9% Similarity=0.037 Sum_probs=82.3
Q ss_pred ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhC
Q psy818 91 SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELF 155 (214)
Q Consensus 91 ~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~ 155 (214)
.+.+.+.++|+.++++| .+++.++|+|++.+ ++++|.++. .|+++|+|+.+|+++|+ .|+.
T Consensus 107 ~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal~~~~~~La----~El~ 182 (269)
T d1xu9a_ 107 NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIR----KEYS 182 (269)
T ss_dssp CCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHH----HHHH
T ss_pred ccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHHHHHHHHHH----HHhh
Confidence 45666778999999999 67899999997644 889999876 89999999999999999 6664
Q ss_pred c----ccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcC
Q psy818 156 P----DLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSS 206 (214)
Q Consensus 156 ~----~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~ 206 (214)
+ .+||+|+||.++|++......... .....+||++|+.++.....
T Consensus 183 ~~~~~I~V~~v~PG~v~T~~~~~~~~~~~------~~~~~~~e~~a~~i~~~~~~ 231 (269)
T d1xu9a_ 183 VSRVNVSITLCVLGLIDTETAMKAVSGIV------HMQAAPKEECALEIIKGGAL 231 (269)
T ss_dssp HHTCCCEEEEEEECCBCCHHHHHHSCGGG------GGGCBCHHHHHHHHHHHHHT
T ss_pred hcCCCEEEEEEecCcCCCcHHHHhccCCc------cccCCCHHHHHHHHHHHhhc
Confidence 3 489999999999998754322111 11236899999988776544
|
| >d1uzxa_ d.20.1.2 (A:) Vacuolar protein sorting-associated {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UEV domain domain: Vacuolar protein sorting-associated species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.33 E-value=3.1e-12 Score=92.83 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhcCCCC---CeEEeecCCCcccEEEEEECCCCCCCCCcE---EEEEEECCCCCCCCCCeEEEEcCC---
Q psy818 9 TARLKQDYMKLKKDPIP---YVIAEPNPANILEWFYVVIGPENTQYEGGM---YLGKLVFPRDFPFKPPSIYMITPN--- 79 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~---~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~---f~~~i~fp~~YP~~pP~v~f~t~~--- 79 (214)
-+|+.+|+..+.++.+. .......++....+.+.+.|.-..+|+|+. |.+.|-||.+||+.||.|.|.++.
T Consensus 21 ~~~v~~dv~~~l~~y~~L~p~~~~~~~~dg~~~~Ll~l~Gtipi~y~g~~~y~ipi~I~lP~~YP~~pP~v~~~~~~~~~ 100 (152)
T d1uzxa_ 21 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 100 (152)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEECCC-------CEEEEEECCTTTTTSCCEEEECCTTCCS
T ss_pred cchHHHHHHHHHHhCCCCCcccceeecCCCCcceEEEEEcccccccCCCceeEEEEEEEcCCCCCCCCCEEEEecCcccc
Confidence 45788888888776542 344444556677888999999999999996 678888999999999999997641
Q ss_pred ------ceec----CCCceeeecCCCCCCCCcCcccHHHHHHHHHHhhccC
Q psy818 80 ------GRFK----TNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120 (214)
Q Consensus 80 ------~~~h----~ng~ic~~~l~~~~e~w~~~~~vn~~l~a~~~~m~~~ 120 (214)
.++| .||.+|+++++ +-|.+..++..+++.+...+.++
T Consensus 101 ~~~~~~i~~hp~Vd~~G~V~lp~L~---~W~~~~s~L~~ll~~l~~~f~~~ 148 (152)
T d1uzxa_ 101 NTISSSLPIQEYIDSNGWIALPILH---CWDPAAMNLIMVVQELMSLLHEP 148 (152)
T ss_dssp CC----CGGGGGBCTTSCBCCHHHH---SCCTTTCCHHHHHHHHHTGGGSC
T ss_pred cCCCcccccCCCCCCCCcEehHHhc---CCCCccCcHHHHHHHHHHHhcCC
Confidence 1234 46999999875 33457889999999988877654
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.30 E-value=4.1e-13 Score=105.31 Aligned_cols=79 Identities=19% Similarity=0.308 Sum_probs=66.8
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccC-------------C--CCCCCCcCc----------HHHHHHHHHHH
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVER-------------S--PTLGSIEMS----------DYERRQLAARS 141 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~-------------~--v~i~S~a~~----------~Y~a~K~a~~~ 141 (214)
+.+.+.++|+.++++| .++++++|+|++. + +|++|+++. .|+++|+|+.+
T Consensus 100 ~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~ 179 (248)
T d1snya_ 100 ITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 179 (248)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHHHHHHH
Confidence 5566777899999999 6789999999752 2 788888754 79999999999
Q ss_pred HHhhccCcchhhhCcc--cccccCccchhhhhccc
Q psy818 142 LRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKS 174 (214)
Q Consensus 142 ~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~ 174 (214)
|+++++ .++.+. +||+|+||+++|++...
T Consensus 180 lt~~la----~e~~~~gI~vn~v~PG~v~T~m~~~ 210 (248)
T d1snya_ 180 ATKSLS----VDLYPQRIMCVSLHPGWVKTDMGGS 210 (248)
T ss_dssp HHHHHH----HHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred HHHHHH----HHhCCCCeEEEEcCCCcccCCcccc
Confidence 999999 777765 99999999999998753
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.28 E-value=5e-13 Score=106.09 Aligned_cols=73 Identities=16% Similarity=0.084 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHH-hh---CCCCChHhHHHHHHHHh
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLY-EA---HPCLQAEDIANTVEFIL 204 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~-~~---~~~~~pedvA~~v~fl~ 204 (214)
.|+++|+|+.+++++++ .++++. |||+|+||.++|++.......+...... .. ..+++|||||++|+||+
T Consensus 156 ~y~asK~al~~ltr~lA----~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~ 231 (274)
T d2pd4a1 156 VMGLAKAALESAVRYLA----VDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL 231 (274)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhhH----HHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHh
Confidence 89999999999999999 888876 9999999999999876654433322221 22 23679999999999999
Q ss_pred cCC
Q psy818 205 SSP 207 (214)
Q Consensus 205 s~p 207 (214)
|..
T Consensus 232 S~~ 234 (274)
T d2pd4a1 232 SSL 234 (274)
T ss_dssp SGG
T ss_pred Chh
Confidence 954
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.27 E-value=8.2e-13 Score=103.66 Aligned_cols=74 Identities=15% Similarity=0.228 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhh-HhHHh----hCCCCChHhHHHHHHHH
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFD-KSLYE----AHPCLQAEDIANTVEFI 203 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~-~~~~~----~~~~~~pedvA~~v~fl 203 (214)
.|+++|+|+.+|+++++ .|+++. |||+|+||.++|++......++.. ..... ..++++|||||++|+||
T Consensus 154 ~Y~asKaal~~ltr~lA----~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL 229 (257)
T d1fjha_ 154 AYAGSKNALTVAVRKRA----AAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFL 229 (257)
T ss_dssp HHHHHHHHHHHHHHHTH----HHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHH
T ss_pred HHHHHhhhhhccccccc----cccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 69999999999999999 888775 999999999999987655433222 22222 22356999999999999
Q ss_pred hcCCC
Q psy818 204 LSSPP 208 (214)
Q Consensus 204 ~s~p~ 208 (214)
+|..+
T Consensus 230 ~S~~s 234 (257)
T d1fjha_ 230 MSPAA 234 (257)
T ss_dssp TSGGG
T ss_pred hCchh
Confidence 98543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.24 E-value=2e-12 Score=101.87 Aligned_cols=71 Identities=23% Similarity=0.273 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCC----CCChHhHHHHHHHHh
Q psy818 131 DYERRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHP----CLQAEDIANTVEFIL 204 (214)
Q Consensus 131 ~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~----~~~pedvA~~v~fl~ 204 (214)
.|+++|+|+.++++.++ .++.+. |||+|+||.++|++... +..........+ .++|||||++++||+
T Consensus 171 ~Y~asKaal~~lt~~lA----~e~~~~gIrVN~I~PG~i~t~~~~~---~~~~~~~~~~~pl~r~~~~peeva~~v~fL~ 243 (266)
T d1mxha_ 171 VYTMAKHALGGLTRAAA----LELAPRHIRVNAVAPGLSLLPPAMP---QETQEEYRRKVPLGQSEASAAQIADAIAFLV 243 (266)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHGGGTEEEEEEEESSBSCCSSSC---HHHHHHHHTTCTTTSCCBCHHHHHHHHHHHH
T ss_pred hhhhhHHHHhhhHHHHH----HHhCccCcEEEEeccCcEeccccCC---HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Confidence 89999999999999999 888875 99999999999875432 222222323322 359999999999999
Q ss_pred cCCC
Q psy818 205 SSPP 208 (214)
Q Consensus 205 s~p~ 208 (214)
|..+
T Consensus 244 s~~s 247 (266)
T d1mxha_ 244 SKDA 247 (266)
T ss_dssp SGGG
T ss_pred Cchh
Confidence 8643
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.21 E-value=7.8e-13 Score=103.83 Aligned_cols=108 Identities=18% Similarity=0.181 Sum_probs=71.5
Q ss_pred CCCceee---ecCCCCCCCCcCcccHH-----HHHHHHHHhhccCC---------------CCCCCCcC-----------
Q psy818 84 TNTRLCL---SMSDFHPDTWNPAWSVS-----TILTGLLSFMVERS---------------PTLGSIEM----------- 129 (214)
Q Consensus 84 ~ng~ic~---~~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~---------------v~i~S~a~----------- 129 (214)
+|+++.. ++.+.+.++|+.++++| .+++.++|+|++.+ ++++|..+
T Consensus 87 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~ 166 (250)
T d1yo6a1 87 NNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQ 166 (250)
T ss_dssp ECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSS
T ss_pred EcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccc
Confidence 3555543 35566667899999999 67899999997531 12222111
Q ss_pred ---cHHHHHHHHHHHHHhhccCcchhhhCcc--cccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHh
Q psy818 130 ---SDYERRQLAARSLRFNLNDKNFCELFPD--LVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFIL 204 (214)
Q Consensus 130 ---~~Y~a~K~a~~~~~~~l~~~~~~e~~~~--~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~ 204 (214)
.+|+++|+|+.+|+++++ .++.+. +||+|+||.++|+|.... ...+|||.|+.++.++
T Consensus 167 ~~~~aY~aSKaal~~l~~~la----~el~~~gI~v~~i~PG~v~T~m~~~~-------------~~~~~e~~a~~~~~~~ 229 (250)
T d1yo6a1 167 FPVLAYRMSKAAINMFGRTLA----VDLKDDNVLVVNFCPGWVQTNLGGKN-------------AALTVEQSTAELISSF 229 (250)
T ss_dssp SCBHHHHHHHHHHHHHHHHHH----HHTGGGTCEEEEEECCCC--------------------------HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHH----HHhcccCeEEEEEecCCCCCCCCCCC-------------CCCCHHHHHHHHHHHH
Confidence 159999999999999999 777665 999999999999986421 1368999999988888
Q ss_pred cCCC
Q psy818 205 SSPP 208 (214)
Q Consensus 205 s~p~ 208 (214)
..+.
T Consensus 230 ~~~~ 233 (250)
T d1yo6a1 230 NKLD 233 (250)
T ss_dssp TTCC
T ss_pred hcCC
Confidence 7653
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.19 E-value=7.2e-13 Score=104.71 Aligned_cols=113 Identities=16% Similarity=0.062 Sum_probs=72.6
Q ss_pred cCCCCCCCCcCcccHH-----HHHHHHHHhhccCC-CCCCCCcCc-------HHHHHHHHHHHHHhhccCcchhhhCcc-
Q psy818 92 MSDFHPDTWNPAWSVS-----TILTGLLSFMVERS-PTLGSIEMS-------DYERRQLAARSLRFNLNDKNFCELFPD- 157 (214)
Q Consensus 92 ~l~~~~e~w~~~~~vn-----~~l~a~~~~m~~~~-v~i~S~a~~-------~Y~a~K~a~~~~~~~l~~~~~~e~~~~- 157 (214)
+++.+.+.|...++++ ...+...+.+...+ +++.|..+. .|+++|+|+.+++++++ .++++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~sK~a~~~ltr~lA----~e~~~~g 182 (268)
T d2h7ma1 107 FFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVA----REAGKYG 182 (268)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHHHHH----HHHHTTT
T ss_pred ccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhccccchhhccccch----hhhhccC
Confidence 4445556677777777 22333333332222 333333322 89999999999999999 888886
Q ss_pred -cccccCccchhhhhccccCC----chh------h-HhHHhhCC----CCChHhHHHHHHHHhcCCC
Q psy818 158 -LVQSISPGLVKSQIFKSSLG----DKF------D-KSLYEAHP----CLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 158 -~vn~v~pg~~~t~~~~~~~~----~~~------~-~~~~~~~~----~~~pedvA~~v~fl~s~p~ 208 (214)
|||+|+||.++|++...... ... . .......| +.+|||||++++||+|...
T Consensus 183 IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a 249 (268)
T d2h7ma1 183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWL 249 (268)
T ss_dssp CEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSC
T ss_pred CcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchh
Confidence 99999999999987643221 110 0 11111222 5689999999999998543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.63 E-value=1.7e-09 Score=84.60 Aligned_cols=121 Identities=9% Similarity=0.012 Sum_probs=76.6
Q ss_pred ceecCCCcee-eecCCCCCCCCcCcccHHHH-HHHHHHhhccCC----CCCCCCcCc-------HHHHHHHHHHHHHhhc
Q psy818 80 GRFKTNTRLC-LSMSDFHPDTWNPAWSVSTI-LTGLLSFMVERS----PTLGSIEMS-------DYERRQLAARSLRFNL 146 (214)
Q Consensus 80 ~~~h~ng~ic-~~~l~~~~e~w~~~~~vn~~-l~a~~~~m~~~~----v~i~S~a~~-------~Y~a~K~a~~~~~~~l 146 (214)
+++|+.|... .++.+.+.++|+.++++|.. ...+.+.|...+ +++||+++. .|+++|+++.+|++.+
T Consensus 92 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la~~~ 171 (259)
T d2fr1a1 92 AVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQR 171 (259)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHhHHHHHHHH
Confidence 3667665443 24666777889999999933 333444454433 788888865 7999999999998887
Q ss_pred cCcchhhhCcccccccCccchhhhhccccCCchhhHhHHhhCCCCChHhHHHHHHHHhcCCC
Q psy818 147 NDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPP 208 (214)
Q Consensus 147 ~~~~~~e~~~~~vn~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fl~s~p~ 208 (214)
+ .+ +.+|++|+||.+.+............. .....+++|+++++++..++..+.
T Consensus 172 ~----~~--Gi~v~~I~pg~~~~~g~~~~~~~~~~~--~~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 172 R----SD--GLPATAVAWGTWAGSGMAEGPVADRFR--RHGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp H----HT--TCCCEEEEECCBC------------CT--TTTEECBCHHHHHHHHHHHHHTTC
T ss_pred H----hC--CCCEEECCCCcccCCccccchHHHHHH--hcCCCCCCHHHHHHHHHHHHhCCC
Confidence 6 32 458999999987654322110011000 012235799999999999887654
|
| >d2in1a1 d.20.1.4 (A:3-164) Ufm1-conjugating enzyme 1, UFC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: UFC1-like domain: Ufm1-conjugating enzyme 1, UFC1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.51 E-value=6.8e-06 Score=56.37 Aligned_cols=79 Identities=24% Similarity=0.428 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCCCCCCCc----------EEEEEEECCCCCCCCCCeEEEEc
Q psy818 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGG----------MYLGKLVFPRDFPFKPPSIYMIT 77 (214)
Q Consensus 8 ~~~rl~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~v~f~t 77 (214)
=..||.+||..|.+- +..++.+-..|.-.=.-+.||-|.|- .|.+++.+|..||..||-|....
T Consensus 26 W~~RLKEEy~aLI~Y------v~nNK~~dndWF~lesn~~GT~W~GkCWyihnl~kYeFd~eFdIP~tYP~t~pEi~lPe 99 (162)
T d2in1a1 26 WVQRLKEEYQSLIRY------VENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPE 99 (162)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHHTTCCCEEEEECTTSSEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGG
T ss_pred HHHHHHHHHHHHHHH------HHhcccccCCeEEeccCCCCCeeeceeeEEEeeeEEEEEEEeccCCCCCCCCcceeccc
Confidence 468999999998551 11112222233333333445555443 26677778999999999997765
Q ss_pred CCc---eecCCCceeeec
Q psy818 78 PNG---RFKTNTRLCLSM 92 (214)
Q Consensus 78 ~~~---~~h~ng~ic~~~ 92 (214)
-+| -.+-.|.||+..
T Consensus 100 LdGKTaKMYRGGkIClt~ 117 (162)
T d2in1a1 100 LDGKTAKMYRGGKICLTD 117 (162)
T ss_dssp GSSSCSSSCGGGBCCCCT
T ss_pred cCCchhhhhcCceeeccc
Confidence 332 223368999974
|
| >d2daya1 d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF25 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: E3 ubiquitin-protein ligase RNF25 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.07 E-value=0.0019 Score=43.04 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=45.2
Q ss_pred HHHHHHHHhcCCCCCeEEeecCCCcccEEEEEECCCC----CCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 12 LKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPEN----TQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 12 l~~e~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~----t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
|..|+..|+.-.+..+......++...+.+.|.-.++ ..-......+.+.||++||..+|.+.+..+
T Consensus 6 ~~~EleaL~SIY~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~L~~~~p~~YP~~~P~i~~~~~ 76 (115)
T d2daya1 6 LPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 76 (115)
T ss_dssp HHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHhHCCCceEEeccCCCCCCeEEEEEEecCCCCCCcccceEEEEEEEcCCCCCCCCCcEEeecc
Confidence 6789999988766667665444444555555432111 111224688999999999999999988764
|
| >d1ukxa_ d.20.1.3 (A:) EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: EIF2-alpha kinase 4 (GCN2-like protein) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.12 E-value=0.32 Score=32.57 Aligned_cols=70 Identities=13% Similarity=-0.031 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCC-----CcccEEEEEECCC-CCCCCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 9 TARLKQDYMKLKKDPIPYVIAEPNPA-----NILEWFYVVIGPE-NTQYEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 9 ~~rl~~e~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~-~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
..+-..|+..|+.-.+..+....... ......+.+.... +.......+.|.+.||.+||..+|.+.+...
T Consensus 12 ~E~Q~~EleaL~SIY~dd~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~i~L~~~lp~~YP~~~P~i~~~~~ 87 (137)
T d1ukxa_ 12 SQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNA 87 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEECCTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCceEEecccccccccCCCeEEEEEeccCCCCccceEEEEEEEECCCCCCcccceEEEecC
Confidence 34557788888875555554432221 1123344444222 2233446799999999999999999988754
|
| >d2dawa1 d.20.1.3 (A:8-148) RWD domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: RWD domain-containing protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.14 E-value=0.083 Score=35.79 Aligned_cols=25 Identities=8% Similarity=0.236 Sum_probs=20.9
Q ss_pred cEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 54 GMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 54 g~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
-.+.+.+.+|++||..+|.|.+..+
T Consensus 68 ~~i~L~~~lp~~YP~~~P~i~~~~~ 92 (141)
T d2dawa1 68 VKIDLQVTMPHSYPYLALQLFGRSS 92 (141)
T ss_dssp EEEEEEEEECSSTTSSCCEEEEECS
T ss_pred ceEEEEEEeCCCCCCCCCCceeecc
Confidence 4578889999999999999976643
|
| >d2daxa1 d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: Uncharacterized protein C21orf6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.10 E-value=0.11 Score=34.99 Aligned_cols=28 Identities=18% Similarity=0.260 Sum_probs=22.8
Q ss_pred CCCcEEEEEEECCCCCCCCCCeEEEEcC
Q psy818 51 YEGGMYLGKLVFPRDFPFKPPSIYMITP 78 (214)
Q Consensus 51 y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 78 (214)
...-...+.+.+|.+||..+|.|.+...
T Consensus 63 ~~~~~l~L~~~lP~~YP~~~P~i~l~~~ 90 (140)
T d2daxa1 63 EKMAMFSLACILPFKYPAVLPEITVRSV 90 (140)
T ss_dssp TCEEEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ccCceEEEEEEecCcCCCcCCceeccCC
Confidence 3445788999999999999999977643
|