Psyllid ID: psy8251

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430----
Protein Sequence
MWPRGFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDRYSKLTYLLTVTEHKLVIQHFSLVQMNFNSPSELILLTCSEPTIFTNFNVKTQILNLTSTFHLFHPLTKYNLSEQLWVKLTI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccEEEccccEEEEEccccEEcccccccccccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccEccccHHHHHHHcccccccccccccccccEcccccHHHHccccccEcccccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHcccccccccccccEccccccEEEccccccccccccccEEEcccHHHEEEEcccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccEEcccccEEcccccccccccccccccccccccccEcccccHHHHEEEEEcccccccccccccccEEEcccHHHHHEHHccccccccccccccccccccEEccccHHHHHHHEcccHHHHHHHHHccccccccccHccHHEEccccccccHHHHHHHHccccccccccccccEEEEEccc
Coil and Loop (DISEMBL)
MWPRGFRGFRQVINLLKHRrehggnlsfdnchicKETFYKHSELVRHLErehniprsesspwccrfcnkRMMTKLSLGIherihtgqrpyicdwcgvgfrskanllqhqpvhtgqrkynctvcgkafsrkSFVTTHMrvhtgkltgkfgqkmsalsgTAFAVEYEIIQECLfaknggkafsrkSFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQieshqttqpQRWAAYRQIgyygrepiqgfhsnvsinklscisqgkgskekkddeeneygkpedfipdVFQAEFSKENDKLLSYLEFcdhhcdrpydcdvcgakftqvgdmrrhrkkhdenggsakdkpgaynktdrysKLTYLLTVTEHKLVIQHFSLVqmnfnspselilltcseptiftnFNVKTQILNLtstfhlfhpltkynlsEQLWVKLTI
Flexible Loop (DISEMBL)
mwprgfrgFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLErehniprsesspwccrfCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQhqpvhtgqrkynCTVCGKAFSRKSFVTTHMRVhtgkltgkfgqKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRvhtgkltgkfgQKISALSGIRTQHLQieshqttqpqrWAAYRQIGYYGREPIQGFHSNVSINKLscisqgkgskekkddeeneygkpedfIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRrhrkkhdenggsakdkpgaynktdRYSKLTYLLTVTEHKLVIQHFSLVQMNFNSPSELILLTCSEPTIFTNFNVKTQILNLTSTFHLFHPltkynlseqlwVKLTI
Low Complexity Region (SEG)
MWPRGFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGFHSNVSINKLSCISQgkgskekkddeeneygkPEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDRYSKLTYLLTVTEHKLVIQHFSLVQMNFNSPSELILLTCSEPTIFTNFNVKTQILNLTSTFHLFHPLTKYNLSEQLWVKLTI
Disordered region (IsUnstruct)
****GFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREH*******SPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGFHSNVSINKLSCI**********************FIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQV***************************DRYSKLTYLLTVTEHKLVIQHFSLVQMNFNSPSELILLTCSEPTIFTNFNVKTQILNLTSTFHLFHPLTKYNLSEQLWVKL**
Disordered Region (DISOPRED)
MWPRGFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDRYSKLTYLLTVTEHKLVIQHFSLVQMNFNSPSELILLTCSEPTIFTNFNVKTQILNLTSTFHLFHPLTKYNLSEQLWVKLTI
Disordered Region (DISEMBL)
MWPRGFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIE********RWAAYRQIGYYGREPIQGFHSNVSINKLSCI*****************GKPEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVG***************AKDKPGAYNKTDRYSKLTYLLTVTEHKLVIQHFSLVQMNFNSPSELILLTCSEPTIFTNFNVKTQILNLTSTFHLFHPLTKYNLSEQLWVKLTI
Disordered Region (DISPRO)
MWPRGFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDRYSKLTYLLTVTEHKLVIQHFSLVQMNFNSPSELILLTCSEPTIFTNFNVKTQILNLTSTFHLFHPLTKYNLSEQLWVKL**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MWPRGFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDRYSKLTYLLTVTEHKLVIQHFSLVQMNFNSPSELILLTCSEPTIFTNFNVKTQILNLTSTFHLFHPLTKYNLSEQLWVKLTI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	434	2.2.26 [Sep-21-2011]
Q80W31	679	Zinc finger protein 569 O	yes	N/A	0.778	0.497	0.277	1e-29
Q3ZCX4	644	Zinc finger protein 568 O	yes	N/A	0.778	0.524	0.295	1e-29
Q14591	655	Zinc finger protein 271 O	no	N/A	0.785	0.520	0.283	1e-29
P08043	459	Zinc finger protein 2 OS=	no	N/A	0.661	0.625	0.296	2e-29
Q96NI8	536	Zinc finger protein 570 O	no	N/A	0.552	0.447	0.298	2e-29
Q5MCW4	686	Zinc finger protein 569 O	no	N/A	0.737	0.466	0.300	3e-29
O75820	626	Zinc finger protein 189 O	no	N/A	0.744	0.515	0.280	6e-29
Q7TSI0	686	Zinc finger protein 12 OS	no	N/A	0.702	0.444	0.316	9e-29
Q6ZN57	461	Zinc finger protein 2 hom	no	N/A	0.661	0.622	0.293	1e-28
Q8BI99	563	Zinc finger protein 879 O	no	N/A	0.705	0.543	0.297	1e-28

>sp|Q80W31|ZN569_MOUSE Zinc finger protein 569 OS=Mus musculus GN=Znf569 PE=2 SV=2

 Score =  131 bits (330), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 170/361 (47%), Gaps = 23/361 (6%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           +GF Q ++L++H R H G   ++ CH C + F    +L+ H    H +  S    + C  
Sbjct: 186 KGFSQTLDLIRHLRVHTGGKLYE-CHQCGKGFSHKEKLINH----HKL-HSREQCYECSE 239

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K  +   +L  H+RIHTG++PY+C  CG  F  K+NL+ H+ +HTG++ Y C  CGK+
Sbjct: 240 CGKTFIKMSNLIRHQRIHTGEKPYVCQECGKSFGQKSNLIDHEKIHTGEKPYKCNECGKS 299

Query: 127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
           FS+K  +  H +VHTG+      + G+    ++  A  +     ++       GKAFS+ 
Sbjct: 300 FSQKQSLVAHQKVHTGEKPYACNECGKAFPRVASLALHMRGHTGEKPYKCDKCGKAFSQF 359

Query: 184 SFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPI 243
           S +  H+RVHTG+   + G+   A S      + I SH   +P      R+   + +  I
Sbjct: 360 SMLIIHVRVHTGEKPYECGECGKAFSQSSALTVHIRSHTGEKPYECKECRKSFSHKKNFI 419

Query: 244 QGFHSNVSINKLSCISQGKGSKEKKD---DEENEYGKPEDFIPDVFQAEFSKENDKLLSY 300
                +       C   GK   +  +    +    G+      +  +A   K N  L+++
Sbjct: 420 THQKIHTREKPYGCNECGKAFIQMSNLVRHQRIHTGEKPYLCKECGKAFSQKSN--LIAH 477

Query: 301 LEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDR-YSKLTY 359
            +   H  ++PY+C+ CG  F+Q  +   H+K H        +KP   NK  + +S++  
Sbjct: 478 EKI--HSGEKPYECNECGKAFSQKQNFITHQKVH------TGEKPYDCNKCGKAFSQIAS 529

Query: 360 L 360
           L
Sbjct: 530 L 530

May be involved in transcriptional regulation.
Mus musculus (taxid: 10090)

>sp|Q3ZCX4|ZN568_HUMAN Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2

 Score =  131 bits (330), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 170/366 (46%), Gaps = 28/366 (7%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F +  NL+ H++ H G   +  C+ C + F + S L+RH    H I   E  P+ C+ 
Sbjct: 257 KAFSRKENLITHQKIHTGEKPY-KCNECGKAFIQMSNLIRH----HRIHTGEK-PYACKD 310

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K    K +L  HERIHTG++PY C  CG  F  K NL++H+ +HTG++ Y C  CG+A
Sbjct: 311 CWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRA 370

Query: 127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
           FSR S VT HMR HTG+      K G+  S  S     +     ++       GKAFS+ 
Sbjct: 371 FSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQS 430

Query: 184 SFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWA----AYRQIGYYG 239
           S +T HMR HT +   +  +   A S         + H   +P   +    A+ Q+    
Sbjct: 431 SSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLI 490

Query: 240 REPIQGFHSNVSINKLSCISQGKGSKEKKDDEENE--YGKPEDFIPDVFQAEFSKENDKL 297
           R   Q  H+       +C   GK   +K +  E+E  +   + +  +     FS+  + L
Sbjct: 491 RH--QRIHTGE--KPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQN-L 545

Query: 298 LSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDRYSKL 357
           L + +   H  ++P+ C+ CG  F+++  +  H + H        +KP   NK  +    
Sbjct: 546 LEHEKI--HTGEKPFKCNECGKAFSRISSLTLHVRSH------TGEKPYECNKCGKAFSQ 597

Query: 358 TYLLTV 363
             LL +
Sbjct: 598 CSLLII 603

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q14591|ZN271_HUMAN Zinc finger protein 271 OS=Homo sapiens GN=ZNF271 PE=2 SV=4

 Score =  131 bits (329), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 186/398 (46%), Gaps = 57/398 (14%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q   L+ H+R H G   +  C  C +TF + S+L+ H +R H    +   P+ C  
Sbjct: 293 KAFNQSSVLILHQRIHTGEKPYP-CDQCSKTFSRLSDLINH-QRIH----TGEKPYPCNQ 346

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           CNK    +  L  H RIHTG++PY CD CG  F   +NL+ HQ +HTG++ Y C+ C K+
Sbjct: 347 CNKMFSRRSDLVKHHRIHTGEKPYECDECGKTFSQSSNLILHQRIHTGEKPYACSDCTKS 406

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEII---QECLFAKNGGKAFSRK 183
           FSR+S +  H R+HTG+      Q   + S ++   +++ +   ++     +  KAFS+ 
Sbjct: 407 FSRRSDLVKHQRIHTGEKPYACNQCDKSFSQSSDLTKHQRVHSGEKPYHCNSCEKAFSQS 466

Query: 184 SFVTTHMRVHTGK---LTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGR 240
           S +  H R+HTG+   L  +  +  S +S +  +H +I  H   +P + +  R+   + +
Sbjct: 467 SDLILHQRIHTGEKYYLCTQCSKSFSQISDL-IKHQRI--HTGEKPYKCSECRKA--FSQ 521

Query: 241 EPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKLLSY 300
                 H  +                KK +  +E GK            FS+ +D L+++
Sbjct: 522 CSALTLHQRIHTG-------------KKPNPCDECGK-----------SFSRRSD-LINH 556

Query: 301 LEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDRYSKLTYL 360
            +   H  ++PY CD CG  F+   D+  H+K H      A++KP    +  R       
Sbjct: 557 QKI--HTGEKPYKCDACGKAFSTCTDLIEHQKTH------AEEKPYQCVQCSRSCSQLSE 608

Query: 361 LTVTEHKLVIQHFSLVQMNFNSPSELILLTCSEPTIFT 398
           LT+ E     +    V MN   P     L C+ PT+F+
Sbjct: 609 LTIHEEVHCGEDSQNV-MNVRKP-----LVCT-PTLFS 639

May be involved in transcriptional regulation. Plays a role in the EBV-mediated transformation process.

Homo sapiens (taxid: 9606)

>sp|P08043|ZFP2_MOUSE Zinc finger protein 2 OS=Mus musculus GN=Zfp2 PE=2 SV=2

 Score =  130 bits (328), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 50/337 (14%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q +NL  H+R H G   +  C  C + F K+S L++H ER H   +    P+ C  
Sbjct: 163 KAFSQSMNLTVHQRTHTGEKPYQ-CKECGKAFRKNSSLIQH-ERIHTGEK----PYKCHD 216

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K     ++L +H+R HTG++PY C+ CG  F    +L+ HQ  HTG++ Y C+ CGKA
Sbjct: 217 CGKAFTQSMNLTVHQRTHTGEKPYECNQCGKAFSQSMHLIVHQRSHTGEKPYECSECGKA 276

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECL--FAKNG-GKAFSRK 183
           FS+ S +T H R HTG+   K  +   + S + + +E++ +   +  F  N  GKAFS+ 
Sbjct: 277 FSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNQCGKAFSKN 336

Query: 184 SFVTTHMRVHTGK------LTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGY 237
           S +T H R+HTG+      + GK     S+L+  +  H   + ++ T+  +  A+ Q  Y
Sbjct: 337 SSLTQHRRIHTGEKPYECMICGKHFTGRSSLTVHQVIHTGEKPYECTECGK--AFSQSAY 394

Query: 238 YGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKL 297
                               I   +    +K  E ++ GK   FI          +N  L
Sbjct: 395 L-------------------IEHQRIHTGEKPYECDQCGKA--FI----------KNSSL 423

Query: 298 LSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
           + +     H  ++PY C+ CG  F++  ++ RH++ H
Sbjct: 424 IVHQRI--HTGEKPYQCNECGKSFSRSTNLTRHQRTH 458

Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance.

Mus musculus (taxid: 10090)

>sp|Q96NI8|ZN570_HUMAN Zinc finger protein 570 OS=Homo sapiens GN=ZNF570 PE=2 SV=1

 Score =  130 bits (326), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 148/328 (45%), Gaps = 88/328 (26%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q  NL++H+R H G   ++ C  C++ F +++ LV+HL R H    +   P+ C+ 
Sbjct: 253 KAFSQRSNLVQHQRIHTGEKPYE-CKECRKAFSQNAHLVQHL-RVH----TGEKPYECKV 306

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K       L  H+R+HTG++PY C  CG  F +++++ QHQ VHTG++ Y C VCGKA
Sbjct: 307 CRKAFSQFAYLAQHQRVHTGEKPYECIECGKAFSNRSSIAQHQRVHTGEKPYECNVCGKA 366

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFV 186
           FS ++++T H R+HTG                      E   EC   K  GKAFS+ S +
Sbjct: 367 FSLRAYLTVHQRIHTG----------------------ERPYEC---KECGKAFSQNSHL 401

Query: 187 TTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGF 246
             H R+HTG+   K  +   A S I                 + A  Q  + G +P +  
Sbjct: 402 AQHQRIHTGEKPYKCQECRKAFSQI----------------AYLAQHQRVHTGEKPYE-- 443

Query: 247 HSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKLLSYLEFCDH 306
                     CI  GK                           FS  ND  L+  +   H
Sbjct: 444 ----------CIECGKA--------------------------FS--NDSSLTQHQRV-H 464

Query: 307 HCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             ++PY+C VCG  F+  G + +H++ H
Sbjct: 465 TGEKPYECTVCGKAFSYCGSLAQHQRIH 492

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5MCW4|ZN569_HUMAN Zinc finger protein 569 OS=Homo sapiens GN=ZNF569 PE=2 SV=1

 Score =  129 bits (325), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 164/356 (46%), Gaps = 36/356 (10%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F     L+KH + H    S+  C+ C + F K S L+RH +R H    +   P+ C+ 
Sbjct: 221 KAFSHKEKLIKHYKIHSREQSYK-CNECGKAFIKMSNLIRH-QRIH----TGEKPYACKE 274

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K    K +L  HE+IHTG++PY C+ CG  F  K +L+ HQ VHTG++ Y C  CGKA
Sbjct: 275 CEKSFSQKSNLIDHEKIHTGEKPYECNECGKAFSQKQSLIAHQKVHTGEKPYACNECGKA 334

Query: 127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
           F R + +  HMR HTG+      K G+  S  S     V     ++       GKAFS+ 
Sbjct: 335 FPRIASLALHMRSHTGEKPYKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNECGKAFSQS 394

Query: 184 SFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRW----AAYRQIG--- 236
           S +T HMR HTG+   +  +   A S  +      + H   +P        A+ Q+    
Sbjct: 395 SALTVHMRSHTGEKPYECKECRKAFSHKKNFITHQKIHTREKPYECNECGKAFIQMSNLV 454

Query: 237 -----YYGREPIQGFHSNVSIN-KLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEF 290
                + G +P        + + K + I+  K    +K  E NE GK            F
Sbjct: 455 RHQRIHTGEKPYICKECGKAFSQKSNLIAHEKIHSGEKPYECNECGKA-----------F 503

Query: 291 SKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPG 346
           S++ +  +++ +   H  ++PYDC+ CG  F+Q+  +  H + H        DK G
Sbjct: 504 SQKQN-FITHQKV--HTGEKPYDCNECGKAFSQIASLTLHLRSHTGEKPYECDKCG 556

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|O75820|ZN189_HUMAN Zinc finger protein 189 OS=Homo sapiens GN=ZNF189 PE=2 SV=2

 Score =  129 bits (323), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 180/381 (47%), Gaps = 58/381 (15%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F +   +++H+R H G   ++ C+ C +TF   S L+RH +R H   R    P+ C  
Sbjct: 183 KSFSRSSFVIEHQRIHTGERPYE-CNYCGKTFSVSSTLIRH-QRIHTGER----PYQCNQ 236

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C +    + SL  H+RIHTG++P+ C  CG  F  K++L++HQ  HTG++ Y+CT C K+
Sbjct: 237 CKQSFSQRRSLVKHQRIHTGEKPHKCSDCGKAFSWKSHLIEHQRTHTGEKPYHCTKCKKS 296

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEII---QECLFAKNGGKAFSRK 183
           FSR S +  H R+HTG+   K G+   A   + + ++++ I   ++       GK+FSR 
Sbjct: 297 FSRNSLLVEHQRIHTGERPHKCGECGKAFRLSTYLIQHQKIHTGEKPFLCIECGKSFSRS 356

Query: 184 SFVTTHMRVHTGK---LTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAA--------- 231
           SF+  H R+HTG+      + G+  S L  + T+H +I  H   +P +            
Sbjct: 357 SFLIEHQRIHTGERPYQCKECGKSFSQLCNL-TRHQRI--HTGDKPHKCEECGKAFSRSS 413

Query: 232 ---------YRQIGYYGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGK----- 277
                     R+  Y   E  + F  N S+     + Q +   ++K  + +E GK     
Sbjct: 414 GLIQHQRIHTREKTYPYNETKESFDPNCSL-----VIQQEVYPKEKSYKCDECGKTFSVS 468

Query: 278 ------------PEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVG 325
                        + ++  V    FS+ +  L+ +     H  +RPY C  CG  F+Q+ 
Sbjct: 469 AHLVQHQRIHTGEKPYLCTVCGKSFSR-SSFLIEHQRI--HTGERPYLCRQCGKSFSQLC 525

Query: 326 DMRRHRKKHDENGGSAKDKPG 346
           ++ RH+  H  N     D+ G
Sbjct: 526 NLIRHQGVHTGNKPHKCDECG 546

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q7TSI0|ZNF12_MOUSE Zinc finger protein 12 OS=Mus musculus GN=Znf12 PE=2 SV=1

 Score =  128 bits (321), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 169/366 (46%), Gaps = 61/366 (16%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q   L  H+R H G   ++ C  C +TFY+   L++H +R H    S   P+ C +
Sbjct: 298 KSFCQKGTLTVHQRTHTGEKPYE-CTECGKTFYQKLHLIQH-QRTH----SGEKPYKCGY 351

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K    K  L  H+R H+G+RPY+C  CG  F  K+ L  HQ +HTG + Y C+ CGK 
Sbjct: 352 CGKSFCQKTHLTQHQRTHSGERPYVCHDCGKTFSQKSALNDHQKIHTGVKLYKCSECGKC 411

Query: 127 FSRKSFVTTHMRVHTGKL------TGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAF 180
           F RKS +TTHMR HTG+        GKF  ++S L+        E   EC      GK+F
Sbjct: 412 FCRKSTLTTHMRTHTGEKPYECNECGKFFSRLSYLTVHYRTHSGEKPYECA---ECGKSF 468

Query: 181 SRKSFVTTHMRVHTGKL---TGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGY 237
              S +  H RVHTG+      + G+  S LS +   H    +H   +P          Y
Sbjct: 469 YLNSALMRHQRVHTGEKPYECNECGKLFSQLSYLTVHH---RTHSGVKP----------Y 515

Query: 238 YGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGKP-EDFIPDVFQAEFSKENDK 296
              E  + F+ N ++ +   I +G+              KP E +I   F   FS+    
Sbjct: 516 ECSECGKTFYQNSALCRHRRIHRGE--------------KPYECYICGKF---FSQ---- 554

Query: 297 LLSYLEFCD--HHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDRY 354
            +SYL      H  ++PY+C  CG  F Q   + RH++ H   G  A +    Y     +
Sbjct: 555 -MSYLTIHHRIHSGEKPYECRECGKSFCQNSALNRHQRTH--TGEKAYE---CYECGKCF 608

Query: 355 SKLTYL 360
           S+++YL
Sbjct: 609 SQMSYL 614

Transcriptional repressor which suppresses activation protein 1 (AP-1)- and serum response element (SRE)-mediated transcriptional activity.

Mus musculus (taxid: 10090)

>sp|Q6ZN57|ZFP2_HUMAN Zinc finger protein 2 homolog OS=Homo sapiens GN=ZFP2 PE=2 SV=1

 Score =  128 bits (321), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 163/337 (48%), Gaps = 50/337 (14%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q +NL  H+R H G   +  C  C + F+K+S L++H ER H   +    P+ C  
Sbjct: 165 KAFSQSMNLTVHQRTHTGEKPYQ-CKECGKAFHKNSSLIQH-ERIHTGEK----PYKCNE 218

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K     ++L +H+R HTG++PY C+ CG  F    +L+ HQ  HTG++ Y C+ CGKA
Sbjct: 219 CGKAFTQSMNLTVHQRTHTGEKPYECNECGKAFSQSMHLIVHQRSHTGEKPYECSQCGKA 278

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECL--FAKNG-GKAFSRK 183
           FS+ S +T H R HTG+   K  +   + S + + +E++ +   +  F  N  GKAFS+ 
Sbjct: 279 FSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNECGKAFSKN 338

Query: 184 SFVTTHMRVHTGK------LTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGY 237
           S +T H R+HTG+      + GK     S+L+  +  H   + ++  +  +  A+ Q  Y
Sbjct: 339 SSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECNECGK--AFSQSAY 396

Query: 238 YGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKL 297
                               I   +    +K  E ++ GK   FI          +N  L
Sbjct: 397 L-------------------IEHQRIHTGEKPYECDQCGKA--FI----------KNSSL 425

Query: 298 LSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             +     H  ++PY C+ CG  F++  ++ RH++ H
Sbjct: 426 TVHQR--THTGEKPYQCNECGKAFSRSTNLTRHQRTH 460

Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance.

Homo sapiens (taxid: 9606)

>sp|Q8BI99|ZN879_MOUSE Zinc finger protein 879 OS=Mus musculus GN=Znf879 PE=2 SV=1

 Score =  127 bits (319), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 161/346 (46%), Gaps = 40/346 (11%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q  +L +H R H G   +  C  C + F   + L+ H +R H   R    P+ C+ 
Sbjct: 239 KAFSQRSSLAQHLRVHTGEKPYL-CSDCGKAFSFTTSLIGH-QRMHTGER----PYECKE 292

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K      SL  H+RIHTG++PY C+ CG  F   ++L+QH  +HTG++ Y C+ CGKA
Sbjct: 293 CGKTFKGSSSLHNHQRIHTGEKPYKCNECGRAFSQCSSLIQHHRIHTGEKPYECSQCGKA 352

Query: 127 FSRKSFVTTHMRVHTGK------LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAF 180
           F+  S ++ H RVHTG+      + GK     SAL+        E    C   K  GKAF
Sbjct: 353 FTSISRLSRHHRVHTGEKPFHCNVCGKVFSYHSALTIHQRTHTGEKPYAC---KECGKAF 409

Query: 181 SRKSFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGR 240
           S+ S +T H R+HTG+   K  +   A S +   ++    H   +P          Y+ +
Sbjct: 410 SQSSALTQHQRIHTGEKPYKCAECGKAFSWLSRLNIHHRIHTGEKP----------YHCK 459

Query: 241 EPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFI--------PDVFQAEFS- 291
           E  + F S+ ++N    I  G+    K  D E  + +    I           F  +   
Sbjct: 460 ECGKAFSSHSAVNTHRKIHTGE-KPYKCSDCEKAFNQSSALIQHQRIHTGEKPFNCKVCG 518

Query: 292 ---KENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
              +++  L++++    H  +RPY C+ CG  F+Q   +  H+K H
Sbjct: 519 KAFRQSSSLMTHMRI--HTGERPYRCEACGKAFSQSSSLANHQKTH 562

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	434
426247137	959	PREDICTED: zinc finger protein 84 [Ovis	0.705	0.319	0.298	6e-29
348563182	1386	PREDICTED: zinc finger protein 91-like [	0.781	0.244	0.269	1e-28
431918350	749	Zinc finger protein 569 [Pteropus alecto	0.721	0.417	0.286	2e-28
426242785	536	PREDICTED: zinc finger protein 570 [Ovis	0.552	0.447	0.301	2e-28
300798037	536	zinc finger protein 570 [Bos taurus] gi|	0.552	0.447	0.301	2e-28
403292919	686	PREDICTED: zinc finger protein 569 [Saim	0.737	0.466	0.303	2e-28
350579429	626	PREDICTED: zinc finger protein 189 isofo	0.744	0.515	0.283	3e-28
359318700	560	PREDICTED: zinc finger protein 569-like	0.735	0.569	0.276	3e-28
350579433	611	PREDICTED: zinc finger protein 189 isofo	0.744	0.528	0.283	3e-28
350585145	536	PREDICTED: zinc finger protein 570 [Sus	0.552	0.447	0.301	3e-28

>gi|426247137|ref|XP_004017343.1| PREDICTED: zinc finger protein 84 [Ovis aries]

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 162/348 (46%), Gaps = 42/348 (12%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q  +LL H+  H G   F  C  C + F + S+LVRH +R H   +    P+ C  
Sbjct: 436 KAFSQKSHLLSHQMTHTGEKPFV-CTKCGKAFSRKSQLVRH-QRTHTGEK----PYECSE 489

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K    KLSL  H+RIHTG++PY+C  CG  F  K++L+ HQ  HTG++ Y C+ CGKA
Sbjct: 490 CGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKA 549

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEII---QECLFAKNGGKAFSRK 183
           F  KS +  H R HTG+   +  +   A    +  + ++     ++     + GKAFSRK
Sbjct: 550 FGEKSKLIRHQRTHTGEKPYECSECRKAFRERSSLINHQRTHTGEKPFECSDCGKAFSRK 609

Query: 184 SFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPI 243
           S +  H R HTG+      +   A S    Q  Q+ +HQ              + G +P 
Sbjct: 610 SHLIPHQRTHTGERPYSCSECRKAFS----QKSQLVNHQRI------------HTGEKPF 653

Query: 244 QGFHSNVSIN---KLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEF---------S 291
           Q      + +   + S +   +    +K     E GK    I ++ + +           
Sbjct: 654 QCSECGKAFSQNRRFSLVLHQRTHTGEKPYVCKECGKTFSQISNLVKHQMIHTGKKPHEC 713

Query: 292 KENDKLLSYLEFC-----DHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
           K+ +K  SYL F       H  ++PY+C  CG  F++  ++ RH++ H
Sbjct: 714 KDCNKTFSYLSFLIEHQRTHTGEKPYECTECGKAFSRASNLTRHQRIH 761

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348563182|ref|XP_003467387.1| PREDICTED: zinc finger protein 91-like [Cavia porcellus]

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 176/360 (48%), Gaps = 21/360 (5%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           RGF Q ++L++H R H G   ++ C+ C++ F    +L++H    H I   E S + C  
Sbjct: 278 RGFSQTLDLIRHLRIHSGEKPYE-CNKCRKAFNHKEKLIKH----HKIHSREQS-YECNE 331

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K  +   +L  H+RIHTG++PY C+ CG  F  K+NL+ H+ +HTG++ Y C  CGKA
Sbjct: 332 CGKTFIKMSNLIRHQRIHTGEKPYACNECGKSFSQKSNLIDHEKIHTGEKPYECNECGKA 391

Query: 127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
           FS+K  +  H +VHTG+      + G+    ++  A  +     ++       GKAFS+ 
Sbjct: 392 FSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQF 451

Query: 184 SFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPI 243
           S +  H+R+HTG+   +  +   + S      + + SH   +P      R+   + +  I
Sbjct: 452 SMLIIHVRIHTGEKPYECNECGKSFSQSSALTVHMRSHTGEKPYECEECRKAFSHKKNFI 511

Query: 244 QGFHSNVSINKLSCISQGKGSKEKKDDEENE--YGKPEDFIPDVFQAEFSKENDKLLSYL 301
                +       C   GK   +  +   ++  +   + ++       FS++++ L+++ 
Sbjct: 512 THQKIHTKEKPYECNECGKAFIQMSNLVRHQRIHTGEKPYVCKECGKAFSQKSN-LIAHE 570

Query: 302 EFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTDR-YSKLTYL 360
           +   H  ++PY+C+ CG  F+Q  +   H+K H        +KP   NK  + +S++  L
Sbjct: 571 KI--HSGEKPYECNECGKAFSQKQNFITHQKVH------TGEKPYDCNKCGKAFSQIASL 622

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|431918350|gb|ELK17576.1| Zinc finger protein 569 [Pteropus alecto]

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 26/339 (7%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           +GF Q ++L++H R H G   ++ C  C++ F    +L++H    H I   E S + C  
Sbjct: 256 KGFSQTLDLIRHLRIHTGEKPYE-CKKCRKAFNHKEKLLKH----HKIHSRERS-YECNE 309

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K  +   +L  H+RIHTG++PY C  CG  F  K+NL+ H+ +HTG++ Y C VCGKA
Sbjct: 310 CGKSFIKMSNLIRHQRIHTGEKPYACKECGKSFSQKSNLIDHEKIHTGEKPYECNVCGKA 369

Query: 127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
           FS+K  +  H +VHTG+      + G+    ++  A  +     ++       GKAFS+ 
Sbjct: 370 FSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQF 429

Query: 184 SFVTTHMRVHTG------KLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGY 237
           S +  H+R+HTG      K  GK   + SAL+      + + SH   +P      R+   
Sbjct: 430 SMLIIHVRIHTGEKPYECKECGKSFSQSSALT------VHMRSHTGEKPYECKECRKAFS 483

Query: 238 YGREPIQGFHSNVSINKLSCISQGKGSKEKKD--DEENEYGKPEDFIPDVFQAEFSKEND 295
           + +  I     +       C   GK   +  +    +  +   + +I       FS++++
Sbjct: 484 HKKNFITHQKIHTREKPYECNECGKAFIQMSNLIRHQRIHTGEKPYICKECGKAFSQKSN 543

Query: 296 KLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
            L+++ +   H  ++PY+C+ CG  F+Q  +   H+K H
Sbjct: 544 -LIAHEKI--HSGEKPYECNECGKAFSQKQNFITHQKVH 579

Source: Pteropus alecto

Species: Pteropus alecto

Genus: Pteropus

Family: Pteropodidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426242785|ref|XP_004015251.1| PREDICTED: zinc finger protein 570 [Ovis aries]

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 149/328 (45%), Gaps = 88/328 (26%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q  NL++H+R H G   ++ C  C++ F +++ LV+HL R H    +   P+ C+ 
Sbjct: 253 KAFSQRSNLVQHQRIHTGEKPYE-CKECRKAFSQNAHLVQHL-RVH----TGEKPYECKV 306

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K       L  H+R+HTG++PY C  CG  F +++++ QHQ VHTG++ Y C VCGKA
Sbjct: 307 CRKAFSQFAYLAQHQRVHTGEKPYECIECGKAFSNRSSIAQHQRVHTGEKPYECNVCGKA 366

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFV 186
           FS ++++T H R+HTG                      E   EC   K  GKAFS+ S +
Sbjct: 367 FSLRAYLTVHQRIHTG----------------------ERPYEC---KECGKAFSQNSHL 401

Query: 187 TTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGF 246
             H R+HTG+   K  Q   A S I                 + A  Q  + G +P +  
Sbjct: 402 AQHQRIHTGEKPYKCQQCRKAFSQI----------------AYLAQHQRVHTGEKPYE-- 443

Query: 247 HSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKLLSYLEFCDH 306
                     CI  GK                           FS  ND  L+  +   H
Sbjct: 444 ----------CIKCGKA--------------------------FS--NDSSLTQHQRV-H 464

Query: 307 HCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             ++PY+C+VCG  F+  G + +H++ H
Sbjct: 465 TGEKPYECNVCGKAFSYCGSLAQHQRIH 492

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|300798037|ref|NP_001178282.1| zinc finger protein 570 [Bos taurus] gi|296477702|tpg|DAA19817.1| TPA: zinc finger protein 570 [Bos taurus]

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 149/328 (45%), Gaps = 88/328 (26%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q  NL++H+R H G   ++ C  C++ F +++ LV+HL R H    +   P+ C+ 
Sbjct: 253 KAFSQRSNLVQHQRIHTGEKPYE-CKECRKAFSQNAHLVQHL-RVH----TGEKPYECKV 306

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K       L  H+R+HTG++PY C  CG  F +++++ QHQ VHTG++ Y C VCGKA
Sbjct: 307 CRKAFSQFAYLAQHQRVHTGEKPYECIECGKAFSNRSSIAQHQRVHTGEKPYECNVCGKA 366

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFV 186
           FS ++++T H R+HTG                      E   EC   K  GKAFS+ S +
Sbjct: 367 FSLRAYLTVHQRIHTG----------------------ERPYEC---KECGKAFSQNSHL 401

Query: 187 TTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGF 246
             H R+HTG+   K  Q   A S I                 + A  Q  + G +P +  
Sbjct: 402 AQHQRIHTGEKPYKCQQCRKAFSQI----------------AYLAQHQRVHTGEKPYE-- 443

Query: 247 HSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKLLSYLEFCDH 306
                     CI  GK                           FS  ND  L+  +   H
Sbjct: 444 ----------CIKCGKA--------------------------FS--NDSSLTQHQRV-H 464

Query: 307 HCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             ++PY+C+VCG  F+  G + +H++ H
Sbjct: 465 TGEKPYECNVCGKAFSYCGSLAQHQRIH 492

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403292919|ref|XP_003937474.1| PREDICTED: zinc finger protein 569 [Saimiri boliviensis boliviensis]

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 166/356 (46%), Gaps = 36/356 (10%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F     L+KH + HG   S++ C+ C + F K S L+RH +R H    +   P+ C+ 
Sbjct: 221 KAFSHKEKLIKHYKIHGREQSYE-CNECGKAFIKMSNLIRH-QRIH----TGEKPYACKE 274

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K    K +L  HE+IHTG++PY C+ CG  F  K +L+ HQ VHTG++ Y C  CGKA
Sbjct: 275 CEKSFSQKSNLIDHEKIHTGEKPYECNECGKAFSQKQSLIAHQKVHTGEKPYACNECGKA 334

Query: 127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
           F R + +  HMR HTG+      K G+  S  S     V     ++       GKAFS+ 
Sbjct: 335 FPRIASLALHMRSHTGEKPYKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNECGKAFSQS 394

Query: 184 SFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRW----AAYRQIG--- 236
           S +T HMR HTG+   +  +   A S  +      + H   +P        A+ Q+    
Sbjct: 395 SALTVHMRSHTGEKPYECKECRKAFSHKKNFITHQKIHTREKPYECNECGKAFIQMSNLV 454

Query: 237 -----YYGREPIQGFHSNVSIN-KLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEF 290
                + G +P        + + K + I+  K    +K  E NE GK            F
Sbjct: 455 RHQRIHTGEKPYICKECGKAFSQKSNLIAHEKIHSGEKPYECNECGKA-----------F 503

Query: 291 SKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPG 346
           S++ +  +++ +   H  ++PYDC+ CG  F+Q+  +  H + H        DK G
Sbjct: 504 SQKQN-FITHQKV--HTGEKPYDCNECGKAFSQIASLTLHLRSHTGEKPYECDKCG 556

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350579429|ref|XP_003122093.3| PREDICTED: zinc finger protein 189 isoform 1 [Sus scrofa]

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 181/381 (47%), Gaps = 58/381 (15%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F +   +++H+R H G   ++ C+ C +TF   S L+RH +R H   R    P+ C  
Sbjct: 183 KSFSRSSFVIEHQRIHTGERPYE-CNYCGKTFSVSSTLIRH-QRIHTGER----PYQCNQ 236

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C +    + SL  H+RIHTG++P+ C  CG  F  K++L++HQ  HTG++ Y+CT C K+
Sbjct: 237 CKQSFSQRRSLVKHQRIHTGEKPHKCSDCGKAFSWKSHLIEHQRTHTGEKPYHCTKCKKS 296

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEII---QECLFAKNGGKAFSRK 183
           FSR S +  H R+HTG+   K G+   A   + + ++++ I   ++       GK+FSR 
Sbjct: 297 FSRNSLLVEHQRIHTGERPHKCGECGKAFRLSTYLIQHQKIHTGEKPFLCIECGKSFSRS 356

Query: 184 SFVTTHMRVHTGK---LTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAA--------- 231
           SF+  H R+HTG+      + G+  S L  + T+H +I  H   +P +            
Sbjct: 357 SFLIEHQRIHTGERPYQCKECGKSFSQLCNL-TRHQRI--HTGDKPHKCEECGKAFSRSS 413

Query: 232 ---------YRQIGYYGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGK----- 277
                     R+  Y   EP + F  N S+     + Q +   ++K  + +E GK     
Sbjct: 414 GLIQHQRIHTREKTYSYNEPNESFDPNCSL-----VIQQEVYPKEKSYKCDECGKTFSVS 468

Query: 278 ------------PEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVG 325
                        + ++  V    FS+ +  L+ +     H  +RPY C  CG  F+Q+ 
Sbjct: 469 AHLVQHQRIHTGEKPYLCTVCGKSFSR-SSFLIEHQRI--HTGERPYLCRQCGKSFSQLC 525

Query: 326 DMRRHRKKHDENGGSAKDKPG 346
           ++ RH+  H  N     D+ G
Sbjct: 526 NLIRHQGVHTGNKPHKCDECG 546

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|359318700|ref|XP_003638890.1| PREDICTED: zinc finger protein 569-like [Canis lupus familiaris]

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 14/333 (4%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           +GF Q ++L++H R H G   ++ C  C++ F    +L++H    H I   E S + C  
Sbjct: 95  KGFSQTLDLIRHLRIHTGEKPYE-CKKCRKAFSHKEKLIKH----HKIHSREQS-YECNE 148

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K  +   +L  H+RIHTG++PY C  CG  F  K+NL+ H+ +HTG++ Y C  CGKA
Sbjct: 149 CGKAFIKMSNLIRHQRIHTGEKPYACKECGKSFSQKSNLIDHEKIHTGEKPYECNECGKA 208

Query: 127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
           FS+K  +T H +VHTG+      + G+    ++  A  +     ++       GKAFS+ 
Sbjct: 209 FSQKQSLTAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQF 268

Query: 184 SFVTTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPI 243
           S +  H+R+HTG+   +  +   + S      + + SH   +P      R+   + +  I
Sbjct: 269 SMLIIHVRIHTGEKPYECNECGKSFSQSSALTVHMRSHTGEKPYECKECRKAFSHKKNFI 328

Query: 244 QGFHSNVSINKLSCISQGKGSKEKKDDEENE--YGKPEDFIPDVFQAEFSKENDKLLSYL 301
                +       C   GK   +  +   ++  +   + +I       FS++++ L+++ 
Sbjct: 329 THQKIHTREKPYECNECGKAFIQMSNLVRHQRIHTGEKPYICKECGKAFSQKSN-LIAHE 387

Query: 302 EFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
           +   H  ++PY+C+ CG  F+Q  +   H+K H
Sbjct: 388 KI--HSGEKPYECNECGKAFSQKQNFITHQKVH 418

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350579433|ref|XP_003480605.1| PREDICTED: zinc finger protein 189 isoform 3 [Sus scrofa]

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 181/381 (47%), Gaps = 58/381 (15%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F +   +++H+R H G   ++ C+ C +TF   S L+RH +R H   R    P+ C  
Sbjct: 168 KSFSRSSFVIEHQRIHTGERPYE-CNYCGKTFSVSSTLIRH-QRIHTGER----PYQCNQ 221

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C +    + SL  H+RIHTG++P+ C  CG  F  K++L++HQ  HTG++ Y+CT C K+
Sbjct: 222 CKQSFSQRRSLVKHQRIHTGEKPHKCSDCGKAFSWKSHLIEHQRTHTGEKPYHCTKCKKS 281

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEII---QECLFAKNGGKAFSRK 183
           FSR S +  H R+HTG+   K G+   A   + + ++++ I   ++       GK+FSR 
Sbjct: 282 FSRNSLLVEHQRIHTGERPHKCGECGKAFRLSTYLIQHQKIHTGEKPFLCIECGKSFSRS 341

Query: 184 SFVTTHMRVHTGK---LTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAA--------- 231
           SF+  H R+HTG+      + G+  S L  + T+H +I  H   +P +            
Sbjct: 342 SFLIEHQRIHTGERPYQCKECGKSFSQLCNL-TRHQRI--HTGDKPHKCEECGKAFSRSS 398

Query: 232 ---------YRQIGYYGREPIQGFHSNVSINKLSCISQGKGSKEKKDDEENEYGK----- 277
                     R+  Y   EP + F  N S+     + Q +   ++K  + +E GK     
Sbjct: 399 GLIQHQRIHTREKTYSYNEPNESFDPNCSL-----VIQQEVYPKEKSYKCDECGKTFSVS 453

Query: 278 ------------PEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAKFTQVG 325
                        + ++  V    FS+ +  L+ +     H  +RPY C  CG  F+Q+ 
Sbjct: 454 AHLVQHQRIHTGEKPYLCTVCGKSFSR-SSFLIEHQRI--HTGERPYLCRQCGKSFSQLC 510

Query: 326 DMRRHRKKHDENGGSAKDKPG 346
           ++ RH+  H  N     D+ G
Sbjct: 511 NLIRHQGVHTGNKPHKCDECG 531

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350585145|ref|XP_003481887.1| PREDICTED: zinc finger protein 570 [Sus scrofa]

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 149/328 (45%), Gaps = 88/328 (26%)

Query: 7   RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
           + F Q  NL++H+R H G   ++ C  C++ F +++ LV+HL R H   +    P+ C+ 
Sbjct: 253 KAFSQRSNLVQHQRIHTGEKPYE-CKECRKAFSQNAHLVQHL-RVHTGEK----PYECKV 306

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K       L  H+R+HTG++PY C  CG  F +++++ QHQ VHTG++ Y C VCGKA
Sbjct: 307 CRKAFSQFAYLAQHQRVHTGEKPYECIECGKAFSNRSSIAQHQRVHTGEKPYECNVCGKA 366

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFV 186
           FS ++++T H R+HTG                      E   EC   K  GKAFS+ S +
Sbjct: 367 FSLRAYLTVHQRIHTG----------------------ERPYEC---KECGKAFSQNSHL 401

Query: 187 TTHMRVHTGKLTGKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGREPIQGF 246
             H R+HTG+   K  Q   A S I                 + A  Q  + G +P +  
Sbjct: 402 AQHQRIHTGEKPYKCQQCRKAFSQI----------------AYLAQHQRVHTGEKPYE-- 443

Query: 247 HSNVSINKLSCISQGKGSKEKKDDEENEYGKPEDFIPDVFQAEFSKENDKLLSYLEFCDH 306
                     CI  GK                           FS  ND  L+  +   H
Sbjct: 444 ----------CIKCGKA--------------------------FS--NDSSLTQHQRV-H 464

Query: 307 HCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             ++PY+C+VCG  F+  G + +H++ H
Sbjct: 465 TGEKPYECNVCGKAFSYCGSLAQHQRIH 492

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	434
UNIPROTKB|J9P3R2	612	J9P3R2 "Uncharacterized protei	0.728	0.516	0.282	3e-42
UNIPROTKB|Q17RR6	527	ZNF569 "ZNF569 protein" [Homo	0.728	0.599	0.273	6.6e-41
UNIPROTKB|F1MH55	685	ZNF569 "Uncharacterized protei	0.728	0.461	0.279	1.8e-40
UNIPROTKB|F1RKN0	686	ZNF569 "Uncharacterized protei	0.728	0.460	0.279	2.4e-40
UNIPROTKB|Q5MCW4	686	ZNF569 "Zinc finger protein 56	0.728	0.460	0.273	1.9e-39
UNIPROTKB|Q6ZN57	461	ZFP2 "Zinc finger protein 2 ho	0.423	0.399	0.373	5.1e-39
UNIPROTKB|F1N7K0	536	ZNF570 "Uncharacterized protei	0.476	0.386	0.340	4.5e-38
UNIPROTKB|J9P173	537	ZNF570 "Uncharacterized protei	0.476	0.385	0.340	4.6e-38
UNIPROTKB|J9NSL7	525	ZNF71 "Uncharacterized protein	0.423	0.350	0.373	5e-38
UNIPROTKB|A5PJY6	612	ZNF189 "Uncharacterized protei	0.490	0.348	0.337	4.2e-37

UNIPROTKB|J9P3R2 J9P3R2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 391 (142.7 bits), Expect = 3.0e-42, Sum P(2) = 3.0e-42
 Identities = 95/336 (28%), Positives = 165/336 (49%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             +GF Q ++L++H R H G   ++ C  C++ F    +L++H    H I   E S + C  
Sbjct:   231 KGFSQTLDLIRHLRIHTGEKPYE-CKKCRKAFSHKEKLIKH----HKIHSREQS-YECNE 284

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C K  +   +L  H+RIHTG++PY C  CG  F  K+NL+ H+ +HTG++ Y C  CGKA
Sbjct:   285 CGKAFIKMSNLIRHQRIHTGEKPYACKECGKSFSQKSNLIDHEKIHTGEKPYECNECGKA 344

Query:   127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
             FS+K  +T H +VHTG+      + G+    ++  A  +     ++       GKAFS+ 
Sbjct:   345 FSQKQSLTAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQF 404

Query:   184 SFVTTHMRVHTGKLT---GKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGR 240
             S +  H+R+HTG+      + G+  S  S + T H++  SH   +P      R+   + +
Sbjct:   405 SMLIIHVRIHTGEKPYECNECGKSFSQSSAL-TVHMR--SHTGEKPYECKECRKAFSHKK 461

Query:   241 EPI--QGFHSNVSINKLSCISQXXXXXXXXXXXXXXXXXPEDFIPDVFQAEFSKENDKLL 298
               I  Q  H+     + +   +                  + +I       FS++++ L+
Sbjct:   462 NFITHQKIHTREKPYECNECGKAFIQMSNLVRHQRIHTGEKPYICKECGKAFSQKSN-LI 520

Query:   299 SYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             ++ +   H  ++PY+C+ CG  F+Q  +   H+K H
Sbjct:   521 AHEKI--HSGEKPYECNECGKAFSQKQNFITHQKVH 554

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q17RR6 ZNF569 "ZNF569 protein" [Homo sapiens (taxid:9606)]

 Score = 372 (136.0 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
 Identities = 92/336 (27%), Positives = 165/336 (49%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             +GF Q ++L++H R H G   ++ C  C++ F    +L++H  + H+  R +S  + C  
Sbjct:    34 KGFNQTLDLIRHLRIHTGEKPYE-CSNCRKAFSHKEKLIKHY-KIHS--REQS--YKCNE 87

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C K  +   +L  H+RIHTG++PY C  C   F  K+NL+ H+ +HTG++ Y C  CGKA
Sbjct:    88 CGKAFIKMSNLIRHQRIHTGEKPYACKECEKSFSQKSNLIDHEKIHTGEKPYECNECGKA 147

Query:   127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
             FS+K  +  H +VHTG+      + G+    ++  A  +     ++       GKAFS+ 
Sbjct:   148 FSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQF 207

Query:   184 SFVTTHMRVHTGKLT---GKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGR 240
             S +  H+R+HTG+      + G+  S  S + T H++  SH   +P      R+   + +
Sbjct:   208 SMLIIHVRIHTGEKPYECNECGKAFSQSSAL-TVHMR--SHTGEKPYECKECRKAFSHKK 264

Query:   241 EPI--QGFHSNVSINKLSCISQXXXXXXXXXXXXXXXXXPEDFIPDVFQAEFSKENDKLL 298
               I  Q  H+     + +   +                  + +I       FS++++ L+
Sbjct:   265 NFITHQKIHTREKPYECNECGKAFIQMSNLVRHQRIHTGEKPYICKECGKAFSQKSN-LI 323

Query:   299 SYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             ++ +   H  ++PY+C+ CG  F+Q  +   H+K H
Sbjct:   324 AHEKI--HSGEKPYECNECGKAFSQKQNFITHQKVH 357

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MH55 ZNF569 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 381 (139.2 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
 Identities = 94/336 (27%), Positives = 164/336 (48%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             +GF Q ++L++H R H G   ++ C  C++ F    +L++H    H I   E S + C  
Sbjct:   192 KGFDQTLDLIRHLRIHTGEKPYE-CKKCRKAFGHKEKLIKH----HKIHSREQS-YECNE 245

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C K  +   +L  H+RIHTG++PY C  CG  F  K+NL+ H+ +HTG++ Y C  CGKA
Sbjct:   246 CGKAFIKMSNLIRHQRIHTGEKPYACKECGKSFSQKSNLIDHEKIHTGEKPYECHECGKA 305

Query:   127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
             FS+K  +  H +VHTG+      + G+    ++  A  +     ++       GKAFS+ 
Sbjct:   306 FSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQF 365

Query:   184 SFVTTHMRVHTGKLT---GKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGR 240
             S +  H+R+HTG+      + G+  S  S + T H++  SH   +P      R+   + +
Sbjct:   366 SMLIIHVRIHTGEKPYECNECGKSFSQSSAL-TVHMR--SHTGEKPYECKECRKAFSHKK 422

Query:   241 EPI--QGFHSNVSINKLSCISQXXXXXXXXXXXXXXXXXPEDFIPDVFQAEFSKENDKLL 298
               I  Q  H+     + +   +                  + +I       FS++++ L+
Sbjct:   423 NFITHQKIHTREKPYECNECGKAFIQMSNLVRHQRIHTGEKPYICKECGKAFSQKSN-LI 481

Query:   299 SYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             ++ +   H  ++PY+C+ CG  F+Q  +   H+K H
Sbjct:   482 AHEKI--HSGEKPYECNECGKAFSQKQNFITHQKVH 515

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1RKN0 ZNF569 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 380 (138.8 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
 Identities = 94/336 (27%), Positives = 163/336 (48%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             +GF Q ++L++H R H G   ++ C  C + F    +L++H    H I   E S + C  
Sbjct:   193 KGFDQTLDLIRHLRIHTGEKPYE-CKKCGKAFSHKEKLIKH----HKIHSREQS-YECNE 246

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C K  +   +L  H+RIHTG++PY C  CG  F  K+NL+ H+ +HTG++ Y C  CGKA
Sbjct:   247 CGKAFIKMSNLIRHQRIHTGEKPYACKECGKSFSQKSNLIDHEKIHTGEKPYECNECGKA 306

Query:   127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
             FS+K  +  H +VHTG+      + G+    ++  A  +     ++       GKAFS+ 
Sbjct:   307 FSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQF 366

Query:   184 SFVTTHMRVHTGKLT---GKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGR 240
             S +  H+R+HTG+      + G+  S  S + T H++  SH   +P      R+   + +
Sbjct:   367 SMLIIHVRIHTGEKPYECNECGKSFSQSSAL-TVHMR--SHTGEKPYECKECRKAFSHKK 423

Query:   241 EPI--QGFHSNVSINKLSCISQXXXXXXXXXXXXXXXXXPEDFIPDVFQAEFSKENDKLL 298
               I  Q  H+     + +   +                  + +I       FS++++ L+
Sbjct:   424 NFITHQKIHTREKPYECNECGKAFIQMSNLVRHQRIHTGEKPYICKECGKAFSQKSN-LI 482

Query:   299 SYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             ++ +   H  ++PY+C+ CG  F+Q  +   H+K H
Sbjct:   483 AHEKI--HSGEKPYECNECGKAFSQKQNFITHQKVH 516

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q5MCW4 ZNF569 "Zinc finger protein 569" [Homo sapiens (taxid:9606)]

 Score = 372 (136.0 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
 Identities = 92/336 (27%), Positives = 165/336 (49%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             +GF Q ++L++H R H G   ++ C  C++ F    +L++H  + H+  R +S  + C  
Sbjct:   193 KGFNQTLDLIRHLRIHTGEKPYE-CSNCRKAFSHKEKLIKHY-KIHS--REQS--YKCNE 246

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C K  +   +L  H+RIHTG++PY C  C   F  K+NL+ H+ +HTG++ Y C  CGKA
Sbjct:   247 CGKAFIKMSNLIRHQRIHTGEKPYACKECEKSFSQKSNLIDHEKIHTGEKPYECNECGKA 306

Query:   127 FSRKSFVTTHMRVHTGK---LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRK 183
             FS+K  +  H +VHTG+      + G+    ++  A  +     ++       GKAFS+ 
Sbjct:   307 FSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQF 366

Query:   184 SFVTTHMRVHTGKLT---GKFGQKISALSGIRTQHLQIESHQTTQPQRWAAYRQIGYYGR 240
             S +  H+R+HTG+      + G+  S  S + T H++  SH   +P      R+   + +
Sbjct:   367 SMLIIHVRIHTGEKPYECNECGKAFSQSSAL-TVHMR--SHTGEKPYECKECRKAFSHKK 423

Query:   241 EPI--QGFHSNVSINKLSCISQXXXXXXXXXXXXXXXXXPEDFIPDVFQAEFSKENDKLL 298
               I  Q  H+     + +   +                  + +I       FS++++ L+
Sbjct:   424 NFITHQKIHTREKPYECNECGKAFIQMSNLVRHQRIHTGEKPYICKECGKAFSQKSN-LI 482

Query:   299 SYLEFCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
             ++ +   H  ++PY+C+ CG  F+Q  +   H+K H
Sbjct:   483 AHEKI--HSGEKPYECNECGKAFSQKQNFITHQKVH 516

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q6ZN57 ZFP2 "Zinc finger protein 2 homolog" [Homo sapiens (taxid:9606)]

 Score = 360 (131.8 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
 Identities = 72/193 (37%), Positives = 111/193 (57%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             + F Q +NL  H+R H G   +  C  C + F+K+S L++H ER H    +   P+ C  
Sbjct:   165 KAFSQSMNLTVHQRTHTGEKPYQ-CKECGKAFHKNSSLIQH-ERIH----TGEKPYKCNE 218

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C K     ++L +H+R HTG++PY C+ CG  F    +L+ HQ  HTG++ Y C+ CGKA
Sbjct:   219 CGKAFTQSMNLTVHQRTHTGEKPYECNECGKAFSQSMHLIVHQRSHTGEKPYECSQCGKA 278

Query:   127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECL--FAKNG-GKAFSRK 183
             FS+ S +T H R HTG+   K  +   + S + + +E++ +   +  F  N  GKAFS+ 
Sbjct:   279 FSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNECGKAFSKN 338

Query:   184 SFVTTHMRVHTGK 196
             S +T H R+HTG+
Sbjct:   339 SSLTQHRRIHTGE 351

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1N7K0 ZNF570 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 350 (128.3 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
 Identities = 75/220 (34%), Positives = 126/220 (57%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             + F Q  NL++H+R H G   ++ C  C++ F +++ LV+HL R H    +   P+ C+ 
Sbjct:   253 KAFSQRSNLVQHQRIHTGEKPYE-CKECRKAFSQNAHLVQHL-RVH----TGEKPYECKV 306

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C K       L  H+R+HTG++PY C  CG  F +++++ QHQ VHTG++ Y C VCGKA
Sbjct:   307 CRKAFSQFAYLAQHQRVHTGEKPYECIECGKAFSNRSSIAQHQRVHTGEKPYECNVCGKA 366

Query:   127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEII---QECLFAKNGGKAFSRK 183
             FS ++++T H R+HTG+   +  +   A S  +   +++ I   ++    +   KAFS+ 
Sbjct:   367 FSLRAYLTVHQRIHTGERPYECKECGKAFSQNSHLAQHQRIHTGEKPYKCQQCRKAFSQI 426

Query:   184 SFVTTHMRVHTGKLTG---KFGQKISALSGIRTQHLQIES 220
             +++  H RVHTG+      K G+  S  S + TQH ++ +
Sbjct:   427 AYLAQHQRVHTGEKPYECIKCGKAFSNDSSL-TQHQRVHT 465

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9P173 ZNF570 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 350 (128.3 bits), Expect = 4.6e-38, Sum P(2) = 4.6e-38
 Identities = 75/220 (34%), Positives = 126/220 (57%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             + F Q  NL++H+R H G   ++ C  C++ F +++ LV+HL R H    +   P+ C+ 
Sbjct:   254 KAFSQRSNLVQHQRIHTGEKPYE-CKECRKAFSQNAHLVQHL-RVH----TGEKPYECKV 307

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C K       L  H+R+HTG++PY C  CG  F +++++ QHQ VHTG++ Y C VCGKA
Sbjct:   308 CRKAFSQFAYLAQHQRVHTGEKPYECIECGKAFSNRSSIAQHQRVHTGEKPYECNVCGKA 367

Query:   127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEII---QECLFAKNGGKAFSRK 183
             FS ++++T H R+HTG+   +  +   A S  +   +++ I   ++    +   KAFS+ 
Sbjct:   368 FSLRAYLTVHQRIHTGERPYECKECGKAFSQNSHLAQHQRIHTGEKPYKCQECRKAFSQI 427

Query:   184 SFVTTHMRVHTGKLTG---KFGQKISALSGIRTQHLQIES 220
             +++  H RVHTG+      K G+  S  S + TQH ++ +
Sbjct:   428 AYLAQHQRVHTGEKPYECIKCGKAFSNDSSL-TQHQRVHT 466

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9NSL7 ZNF71 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 361 (132.1 bits), Expect = 5.0e-38, Sum P(2) = 5.0e-38
 Identities = 72/193 (37%), Positives = 110/193 (56%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             + F Q +NL+ H+R H G   +  C +C++ F K S L +H ER H    +   P+ C  
Sbjct:   229 KAFSQRMNLIVHQRTHTGEKPYV-CDVCRKAFRKTSSLAQH-ERVH----TGEKPYACGD 282

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C K     + L +H+R HTG++PY+CD CG  F    +L +HQ  HTG++ Y C  CGKA
Sbjct:   283 CGKAFSQNMHLIVHQRTHTGEKPYVCDVCGRAFSQNMHLTEHQRTHTGEKPYACKECGKA 342

Query:   127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECL--FAKNG-GKAFSRK 183
             F++ S +T H R HTG+     G+   A S +++ ++++     +  F  N  GKAFS+ 
Sbjct:   343 FNKSSSLTLHHRNHTGEKPYACGECGKAFSQSSYLIQHQRFHIGVKPFECNACGKAFSKN 402

Query:   184 SFVTTHMRVHTGK 196
             S +T H R+HTG+
Sbjct:   403 SSLTQHQRIHTGE 415

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|A5PJY6 ZNF189 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 354 (129.7 bits), Expect = 4.2e-37, Sum P(2) = 4.2e-37
 Identities = 77/228 (33%), Positives = 127/228 (55%)

Query:     7 RGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRF 66
             + F +   +++H+R H G   ++ C+ C +TF   S L+RH +R H   R    P+ C  
Sbjct:   169 KSFSRSSFVIEHQRIHTGERPYE-CNYCGKTFSVSSTLIRH-QRIHTGER----PYQCNH 222

Query:    67 CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
             C +    + SL  H+RIHTG++P+ C  CG  F  K++L++HQ  HTG++ Y+CT C K+
Sbjct:   223 CKQSFSQRRSLVKHQRIHTGEKPHKCSDCGKAFSWKSHLIEHQRTHTGEKPYHCTKCKKS 282

Query:   127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEII---QECLFAKNGGKAFSRK 183
             FSR S +  H R+HTG+   K G+   A   + + ++++ I   ++       GK+FSR 
Sbjct:   283 FSRNSLLVEHQRIHTGERPHKCGECGKAFRLSTYLIQHQKIHTGEKPFLCIECGKSFSRS 342

Query:   184 SFVTTHMRVHTGKLT---GKFGQKISALSGIRTQHLQIESHQTTQPQR 228
             SF+  H R+HTG+      + G+  S L  + T+H +I  H   +P +
Sbjct:   343 SFLIEHQRIHTGERPYQCKECGKSFSQLCNL-TRHQRI--HTGDKPHK 387

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	434
KOG1074|consensus	958		99.94
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.91
KOG1074|consensus	958		99.91
KOG3608|consensus	467		99.89
KOG3608|consensus	467		99.86
KOG3623|consensus	1007		99.84
KOG3623|consensus	1007		99.78
KOG3576|consensus	267		99.57
KOG3576|consensus	267		99.57
PLN03086	567	PRLI-interacting factor K; Provisional	99.0
PLN03086	567	PRLI-interacting factor K; Provisional	98.98
PHA00733	128	hypothetical protein	98.9
PHA00733	128	hypothetical protein	98.85
PHA02768	55	hypothetical protein; Provisional	98.6
PHA02768	55	hypothetical protein; Provisional	98.55
KOG3993|consensus	500		98.45
KOG3993|consensus	500		98.43
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.36
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.29
PHA00616	44	hypothetical protein	98.18
PHA00616	44	hypothetical protein	97.97
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.9
PHA00732	79	hypothetical protein	97.85
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.81
PHA00732	79	hypothetical protein	97.63
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.6
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.54
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.5
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.4
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.18
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.16
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.05
smart00355	26	ZnF_C2H2 zinc finger.	97.02
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.01
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.87
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.71
KOG2231|consensus	669		96.51
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.51
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.46
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.25
smart00355	26	ZnF_C2H2 zinc finger.	96.01
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.82
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.79
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.53
KOG2231|consensus	669		95.4
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.18
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.97
PRK04860	160	hypothetical protein; Provisional	94.88
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.85
PRK04860	160	hypothetical protein; Provisional	94.73
KOG2482|consensus	423		93.87
KOG1146|consensus	1406		93.52
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.3
COG5236	493	Uncharacterized conserved protein, contains RING Z	92.62
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.25
KOG2893|consensus	341		91.31
COG5048	467	FOG: Zn-finger [General function prediction only]	91.31
COG5048	467	FOG: Zn-finger [General function prediction only]	90.61
KOG1146|consensus	1406		90.42
KOG2785|consensus	390		89.8
KOG2482|consensus	423		89.73
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	89.64
COG5236	493	Uncharacterized conserved protein, contains RING Z	89.47
PF04838	159	Baculo_LEF5: Baculoviridae late expression factor	87.04
KOG2893|consensus	341		86.88
KOG2785|consensus	390		86.22
COG4049	65	Uncharacterized protein containing archaeal-type C	86.2
KOG4173|consensus	253		85.62
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	84.67
COG4049	65	Uncharacterized protein containing archaeal-type C	82.29
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	80.3

>KOG1074|consensus

Probab=99.94  E-value=1.3e-27  Score=234.68  Aligned_cols=124  Identities=27%  Similarity=0.584  Sum_probs=98.6

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCC----ceecc---ccCcccCChhHH
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQR----KYNCT---VCGKAFSRKSFV  133 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----~~~C~---~C~k~F~~~~~L  133 (434)
                      |..|-+|.++..-++.|+.|.++|+||+||+|.+||+.|.++++|+.|+.+|...-    .+.|+   +|-+.|...-.|
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            35699999999999999999999999999999999999999999999999886543    48899   999999999999


Q ss_pred             HhhhccccCCcccccccccccccccccchhhhhhhhceecccCCcccCChhhHHHHhhhccCC
Q psy8251         134 TTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGK  196 (434)
Q Consensus       134 ~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~  196 (434)
                      ..|+++|.+.....-..  . .  ..... -..|..|      .+.|.....+..++..|.+.
T Consensus       685 pQhIriH~~~~~s~g~~--a-~--e~~~~-adq~~~~------qk~~~~a~~f~~~~se~~~~  735 (958)
T KOG1074|consen  685 PQHIRIHLGGQISNGGT--A-A--EGILA-ADQCSSC------QKTFSDARSFSQQISEQPSP  735 (958)
T ss_pred             cceEEeecCCCCCCCcc--c-c--cccch-hcccchh------hhcccccccchhhhhccCCc
Confidence            99999998543311100  0 0  11111 1126666      99999999999999887543

>KOG2462|consensus

Probab=99.93  E-value=7.4e-27  Score=203.67  Aligned_cols=131  Identities=30%  Similarity=0.641  Sum_probs=123.3

Q ss_pred             CCCccccccCCHHHHHHHHHHcCC---CCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHH
Q psy8251           1 MWPRGFRGFRQVINLLKHRREHGG---NLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSL   77 (434)
Q Consensus         1 ~C~~C~~~F~~~~~l~~H~~~h~~---~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L   77 (434)
                      +|+.||+.+.+..+|.+|.++|-.   .+.+. |++||+.|.+...|+.|++ .|      .-+.+|.+||+.|.....|
T Consensus       132 ~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~-C~~C~K~YvSmpALkMHir-TH------~l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  132 KCPECGKSYSTSSNLSRHKQTHRSLDSKKAFS-CKYCGKVYVSMPALKMHIR-TH------TLPCECGICGKAFSRPWLL  203 (279)
T ss_pred             eccccccccccccccchhhccccccccccccc-CCCCCceeeehHHHhhHhh-cc------CCCcccccccccccchHHh
Confidence            599999999999999999999953   45666 9999999999999999999 55      3589999999999999999


Q ss_pred             HHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhcc
Q psy8251          78 GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRV  139 (434)
Q Consensus        78 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~  139 (434)
                      +-|+|+|+|||||.|+.|++.|.++++|+.|+++|.+.|+|+|..|+|.|...+.|..|...
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999764

>KOG2462|consensus

Probab=99.91  E-value=1.8e-25  Score=194.96  Aligned_cols=138  Identities=30%  Similarity=0.648  Sum_probs=125.6

Q ss_pred             CCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchH
Q psy8251          25 NLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKAN  104 (434)
Q Consensus        25 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  104 (434)
                      ...|. |++||+.+.+...|.+|.+ .|... ...+.+.|++|++.|.+-..|+.|+++|+  -++.|.+|||.|...+.
T Consensus       128 ~~r~~-c~eCgk~ysT~snLsrHkQ-~H~~~-~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWL  202 (279)
T KOG2462|consen  128 HPRYK-CPECGKSYSTSSNLSRHKQ-THRSL-DSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWL  202 (279)
T ss_pred             CCcee-ccccccccccccccchhhc-ccccc-cccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHH
Confidence            44577 9999999999999999998 55322 34678999999999999999999999997  57999999999999999


Q ss_pred             HHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhhhceecccCCcccCChh
Q psy8251         105 LLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKS  184 (434)
Q Consensus       105 l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~  184 (434)
                      |+-|+|+|+|||||.|+.|++.|..+++|+.||++|.+.+.                  |. |..|      +|.|..++
T Consensus       203 LQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~------------------~q-C~~C------~KsFsl~S  257 (279)
T KOG2462|consen  203 LQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK------------------HQ-CPRC------GKSFALKS  257 (279)
T ss_pred             hhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcc------------------cc-Ccch------hhHHHHHH
Confidence            99999999999999999999999999999999999999988                  66 7777      99999999


Q ss_pred             hHHHHhhh
Q psy8251         185 FVTTHMRV  192 (434)
Q Consensus       185 ~L~~H~~~  192 (434)
                      -|.+|...
T Consensus       258 yLnKH~ES  265 (279)
T KOG2462|consen  258 YLNKHSES  265 (279)
T ss_pred             HHHHhhhh
Confidence            99999864

>KOG1074|consensus

Probab=99.91  E-value=3.2e-25  Score=217.94  Aligned_cols=87  Identities=30%  Similarity=0.536  Sum_probs=76.6

Q ss_pred             ceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhh
Q psy8251          89 PYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQ  168 (434)
Q Consensus        89 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~  168 (434)
                      |-+|.+|.+...-++.|+.|.++|+||+||+|.+||+.|+++.+|+.|+.+|...-+                  ++   
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~------------------~R---  663 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPP------------------AR---  663 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcc------------------cc---
Confidence            378999999999999999999999999999999999999999999999999987665                  22   


Q ss_pred             hceecc---cCCcccCChhhHHHHhhhccCC
Q psy8251         169 ECLFAK---NGGKAFSRKSFVTTHMRVHTGK  196 (434)
Q Consensus       169 ~C~~C~---~C~~~F~~~~~L~~H~~~H~~~  196 (434)
                      .++.|+   +|.+.|.+.-.|..|+++|.+.
T Consensus       664 ~q~ScP~~~ic~~kftn~V~lpQhIriH~~~  694 (958)
T KOG1074|consen  664 VQFSCPSTFICQKKFTNAVTLPQHIRIHLGG  694 (958)
T ss_pred             ccccCCchhhhcccccccccccceEEeecCC
Confidence            234445   5599999999999999999853

>KOG3608|consensus

Probab=99.89  E-value=1.5e-23  Score=187.19  Aligned_cols=163  Identities=23%  Similarity=0.434  Sum_probs=133.8

Q ss_pred             CCccccccCCHHHHHHHHHHcCCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHH
Q psy8251           2 WPRGFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHE   81 (434)
Q Consensus         2 C~~C~~~F~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~   81 (434)
                      +..|-+.|.++..|++|+++|++++... |+.||.-|.++..|..|+++.-.   ....+|.|..|.+.|.++..|..|+
T Consensus       182 W~~Ct~~~~~k~~LreH~r~Hs~eKvvA-Cp~Cg~~F~~~tkl~DH~rRqt~---l~~n~fqC~~C~KrFaTeklL~~Hv  257 (467)
T KOG3608|consen  182 WAMCTKHMGNKYRLREHIRTHSNEKVVA-CPHCGELFRTKTKLFDHLRRQTE---LNTNSFQCAQCFKRFATEKLLKSHV  257 (467)
T ss_pred             chhhhhhhccHHHHHHHHHhcCCCeEEe-cchHHHHhccccHHHHHHHhhhh---hcCCchHHHHHHHHHhHHHHHHHHH
Confidence            3568888999999999999999999988 99999999999999999885542   3456899999999999999999998


Q ss_pred             HhccCCCceeccccccccccchHHHchhhh-cCCCCceeccccCcccCChhHHHhhhccccCCccccccccccccccccc
Q psy8251          82 RIHTGQRPYICDWCGVGFRSKANLLQHQPV-HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAF  160 (434)
Q Consensus        82 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~  160 (434)
                      ..|..  -|+|++|+.+....++|..|++. |..++||+|+.|++.|.+.+.|.+|...|. +..               
T Consensus       258 ~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~---------------  319 (467)
T KOG3608|consen  258 VRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTV---------------  319 (467)
T ss_pred             HHhhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccc---------------
Confidence            88864  58899999999999999999874 777889999999999999999999998887 333               


Q ss_pred             chhhhhhhhceecccCCcccCChhhHHHHhhhcc
Q psy8251         161 AVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHT  194 (434)
Q Consensus       161 ~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~  194 (434)
                         |. |..    +.|..+|...-.|++|++.++
T Consensus       320 ---y~-C~h----~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  320 ---YQ-CEH----PDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             ---ee-cCC----CCCcHHHHHHHHHHHHHHHhc
Confidence               33 544    124888888888999887644

>KOG3608|consensus

Probab=99.86  E-value=2.3e-22  Score=179.70  Aligned_cols=167  Identities=25%  Similarity=0.449  Sum_probs=120.3

Q ss_pred             CCccccccCCHHHHHHHHHHcCC------------CCCCCCcc--chhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcC
Q psy8251           2 WPRGFRGFRQVINLLKHRREHGG------------NLSFDNCH--ICKETFYKHSELVRHLEREHNIPRSESSPWCCRFC   67 (434)
Q Consensus         2 C~~C~~~F~~~~~l~~H~~~h~~------------~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C   67 (434)
                      +..|++.|.+...|..|.-.|..            ++|...|.  .|-+.|.+++.|++|++ +|    ++++...|+.|
T Consensus       139 WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r-~H----s~eKvvACp~C  213 (467)
T KOG3608|consen  139 WEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIR-TH----SNEKVVACPHC  213 (467)
T ss_pred             hhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHH-hc----CCCeEEecchH
Confidence            45788888888888888777641            22333364  47778888888888887 66    67778888888


Q ss_pred             CcccCCHHHHHHHHHhc--cCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhcc-ccCCc
Q psy8251          68 NKRMMTKLSLGIHERIH--TGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRV-HTGKL  144 (434)
Q Consensus        68 ~~~f~~~~~L~~H~~~h--~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~-h~~~~  144 (434)
                      |..|.++..|-.|++..  ....+|.|..|.|.|.+...|..|++.|..  -|+|+.|+.+...+++|..|++. |...+
T Consensus       214 g~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dk  291 (467)
T KOG3608|consen  214 GELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDK  291 (467)
T ss_pred             HHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChHHHHHHHHhhhccCC
Confidence            88888888888887633  345678888888888888888888877754  37888888888888888888774 55556


Q ss_pred             ccccccccccccccccchhhhhhhhceecccCCcccCChhhHHHHhhhccCCCCCCC
Q psy8251         145 TGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKF  201 (434)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  201 (434)
                      |                  +. |+.|      ++.|...++|.+|..+|+ +..|.|
T Consensus       292 p------------------fK-Cd~C------d~~c~~esdL~kH~~~HS-~~~y~C  322 (467)
T KOG3608|consen  292 P------------------FK-CDEC------DTRCVRESDLAKHVQVHS-KTVYQC  322 (467)
T ss_pred             C------------------cc-ccch------hhhhccHHHHHHHHHhcc-ccceec
Confidence            6                  33 4444      888888888888887777 444444

>KOG3623|consensus

Probab=99.84  E-value=1.5e-21  Score=189.07  Aligned_cols=109  Identities=27%  Similarity=0.502  Sum_probs=94.1

Q ss_pred             CCCccccccCCHHHHHHHHHHcC--CCCCCCCccchhhhcCCHHHHHHHHHhhcCCCC---------CCCCCeecCcCCc
Q psy8251           1 MWPRGFRGFRQVINLLKHRREHG--GNLSFDNCHICKETFYKHSELVRHLEREHNIPR---------SESSPWCCRFCNK   69 (434)
Q Consensus         1 ~C~~C~~~F~~~~~l~~H~~~h~--~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~---------~~~~~~~C~~C~~   69 (434)
                      +|+.|.+.+.....|+.|++..+  .+..|. |..|..+|..+..|.+||. .|..-.         ...+.|+|.+||+
T Consensus       212 tcpycdrgykrltslkeHikyrhekne~nfs-C~lCsytFAyRtQLErhm~-~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  212 TCPYCDRGYKRLTSLKEHIKYRHEKNEPNFS-CMLCSYTFAYRTQLERHMQ-LHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhCCCCCc-chhhhhhhhhHHHHHHHHH-hhcCCCcccccccchhhhccccccccch
Confidence            59999999999999999998643  345576 9999999999999999998 553111         1235699999999


Q ss_pred             ccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhh
Q psy8251          70 RMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPV  111 (434)
Q Consensus        70 ~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  111 (434)
                      +|+.+..|+.|+|+|.|+|||.|+.|+|.|+..+++..|+..
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            999999999999999999999999999999999999999764

>KOG3623|consensus

Probab=99.78  E-value=1.2e-19  Score=176.00  Aligned_cols=107  Identities=25%  Similarity=0.628  Sum_probs=97.6

Q ss_pred             CccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCC-------------Cceeccccc
Q psy8251          30 NCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQ-------------RPYICDWCG   96 (434)
Q Consensus        30 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~-------------~~~~C~~C~   96 (434)
                      .|++|...+.....|+.|++..|.   ..+..|.|..|..+|.....|.+|+.+|...             +.|+|.+||
T Consensus       212 tcpycdrgykrltslkeHikyrhe---kne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECg  288 (1007)
T KOG3623|consen  212 TCPYCDRGYKRLTSLKEHIKYRHE---KNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECG  288 (1007)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHh---hCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccc
Confidence            499999999999999999997774   4466799999999999999999999998532             459999999


Q ss_pred             cccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhcc
Q psy8251          97 VGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRV  139 (434)
Q Consensus        97 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~  139 (434)
                      |.|..+-.|+.|+|+|.|+|||.|+.|+|.|....++..||..
T Consensus       289 KAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            9999999999999999999999999999999999999999853

>KOG3576|consensus

Probab=99.57  E-value=5.7e-16  Score=128.66  Aligned_cols=125  Identities=24%  Similarity=0.545  Sum_probs=103.5

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhh
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHM  137 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~  137 (434)
                      +...|.|.+|++.|.....|.+|++.|...+.|.|..||+.|.+.-.|++|.++|+|.+||+|..|++.|+++-+|..|+
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            34569999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCcc-cccccccccccccccchhhhhhhhceecccCCcccCChhhHHHHhhhccCCC
Q psy8251         138 RVHTGKLT-GKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKL  197 (434)
Q Consensus       138 ~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~~  197 (434)
                      +.-+|... +.+..+               =..=+.|+.||..-.....+..|++.|+...
T Consensus       194 ~kvhgv~~~yayker---------------r~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKER---------------RAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHcCchHHHHHHHh---------------hhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            86666422 111000               0001445555999999999999999887643

>KOG3576|consensus

Probab=99.57  E-value=8.3e-16  Score=127.69  Aligned_cols=116  Identities=32%  Similarity=0.607  Sum_probs=103.0

Q ss_pred             CCCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccch
Q psy8251          24 GNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKA  103 (434)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~  103 (434)
                      +...+. |.+|++.|.-...|.+|++ -|    ...+.|-|..||+.|...-+|++|+++|+|.+||+|..|++.|..+-
T Consensus       114 d~d~ft-CrvCgK~F~lQRmlnrh~k-ch----~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrc  187 (267)
T KOG3576|consen  114 DQDSFT-CRVCGKKFGLQRMLNRHLK-CH----SDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRC  187 (267)
T ss_pred             CCCeee-eehhhhhhhHHHHHHHHhh-hc----cHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhc
Confidence            345676 9999999999999999998 66    56778999999999999999999999999999999999999999999


Q ss_pred             HHHchhhhcCC-----------CCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         104 NLLQHQPVHTG-----------QRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       104 ~l~~H~~~h~~-----------~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      +|..|++.-+|           ++.|.|..||.+-.....+..|+..|+..-+
T Consensus       188 sleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  188 SLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             cHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            99999875444           3569999999999999999999999987544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.00  E-value=2.9e-10  Score=112.36  Aligned_cols=100  Identities=23%  Similarity=0.506  Sum_probs=76.0

Q ss_pred             CCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccccccccc------
Q psy8251          28 FDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRS------  101 (434)
Q Consensus        28 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~------  101 (434)
                      +. |+.|++.|. ...|..|+..+|       .++.|+ ||+.+ .+..|..|+.+|.+.+++.|+.|++.|..      
T Consensus       454 ~~-C~~Cgk~f~-~s~LekH~~~~H-------kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d  522 (567)
T PLN03086        454 VH-CEKCGQAFQ-QGEMEKHMKVFH-------EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMD  522 (567)
T ss_pred             cc-CCCCCCccc-hHHHHHHHHhcC-------CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccc
Confidence            45 888888885 577888887443       578888 88755 56788889888888888999999888841      


Q ss_pred             ----chHHHchhhhcCCCCceeccccCcccCChhHHHhhhccc
Q psy8251         102 ----KANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus       102 ----~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h  140 (434)
                          ...|..|...+ |.+++.|..||+.+..+ .|..|+..-
T Consensus       523 ~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~  563 (567)
T PLN03086        523 VRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAV  563 (567)
T ss_pred             hhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHh
Confidence                34788887775 78889999998888754 566676543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.98  E-value=1.2e-09  Score=107.99  Aligned_cols=142  Identities=19%  Similarity=0.317  Sum_probs=107.2

Q ss_pred             CCCccccccCCHHHHHHHHHHcCCCCCCCCccc--hhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHH
Q psy8251           1 MWPRGFRGFRQVINLLKHRREHGGNLSFDNCHI--CKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLG   78 (434)
Q Consensus         1 ~C~~C~~~F~~~~~l~~H~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~   78 (434)
                      .|+.|..... ...|..|...... .... |+.  ||..|.. ..+              +..+.|+.|++.|. ...|.
T Consensus       409 ~C~NC~~~i~-l~~l~lHe~~C~r-~~V~-Cp~~~Cg~v~~r-~el--------------~~H~~C~~Cgk~f~-~s~Le  469 (567)
T PLN03086        409 ECRNCKHYIP-SRSIALHEAYCSR-HNVV-CPHDGCGIVLRV-EEA--------------KNHVHCEKCGQAFQ-QGEME  469 (567)
T ss_pred             ECCCCCCccc-hhHHHHHHhhCCC-ccee-CCcccccceeec-ccc--------------ccCccCCCCCCccc-hHHHH
Confidence            3778887654 4567788866543 3344 874  9988732 222              33468999999996 68899


Q ss_pred             HHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCC----------hhHHHhhhccccCCccccc
Q psy8251          79 IHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSR----------KSFVTTHMRVHTGKLTGKF  148 (434)
Q Consensus        79 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~----------~~~L~~H~~~h~~~~~~~~  148 (434)
                      .|+.+++  +++.|+ ||+.+ .+..|..|+.+|.+.+++.|..|++.|..          ...|..|.... |.++   
T Consensus       470 kH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt---  541 (567)
T PLN03086        470 KHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT---  541 (567)
T ss_pred             HHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcc---
Confidence            9999985  789999 99765 66899999999999999999999999952          35799998885 7777   


Q ss_pred             ccccccccccccchhhhhhhhceecccCCcccCChhhHHHHhhh
Q psy8251         149 GQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRV  192 (434)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~  192 (434)
                                     +. |..|      |+.+..+ +|..|+..
T Consensus       542 ---------------~~-C~~C------gk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        542 ---------------AP-CDSC------GRSVMLK-EMDIHQIA  562 (567)
T ss_pred             ---------------eE-cccc------CCeeeeh-hHHHHHHH
Confidence                           44 7666      9888654 56777654

>PHA00733 hypothetical protein

Probab=98.90  E-value=8.1e-10  Score=89.23  Aligned_cols=83  Identities=22%  Similarity=0.341  Sum_probs=63.5

Q ss_pred             CCCCeecCcCCcccCCHHHHHHH--H---HhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhH
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIH--E---RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSF  132 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H--~---~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~  132 (434)
                      .++++.|.+|.+.|.....|..+  +   ..+.++++|.|+.|++.|.+...|..|++.+  +.+|.|+.|++.|.....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHH
Confidence            46778888888777776666554  1   1234477888888888888888888888876  356899999999999999


Q ss_pred             HHhhhccccC
Q psy8251         133 VTTHMRVHTG  142 (434)
Q Consensus       133 L~~H~~~h~~  142 (434)
                      |..|+...|+
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            9999887665

>PHA00733 hypothetical protein

Probab=98.85  E-value=2.8e-09  Score=86.11  Aligned_cols=97  Identities=21%  Similarity=0.328  Sum_probs=75.3

Q ss_pred             HHHHHHHHHcCCCCCCCCccchhhhcCCHHHHHHH--HHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCCCce
Q psy8251          13 INLLKHRREHGGNLSFDNCHICKETFYKHSELVRH--LEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPY   90 (434)
Q Consensus        13 ~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H--~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   90 (434)
                      ..|..+-..-...+++. |.+|.+.|.+...|..|  +. .+ ....+..+|.|+.|++.|.+...|..|++.+  +.+|
T Consensus        26 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~l~-~~-~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~  100 (128)
T PHA00733         26 EELKRYHSLTPEQKRLI-RAVVKTLIYNPQLLDESSYLY-KL-LTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSK  100 (128)
T ss_pred             HHhhhhhcCChhhhhHH-HHHHhhhccChhhhcchHHHH-hh-cccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCc
Confidence            33444333333456787 99999999998888877  33 22 1224578999999999999999999999976  3579


Q ss_pred             eccccccccccchHHHchhhhcCC
Q psy8251          91 ICDWCGVGFRSKANLLQHQPVHTG  114 (434)
Q Consensus        91 ~C~~C~~~f~~~~~l~~H~~~h~~  114 (434)
                      .|+.|++.|.....|..|+...++
T Consensus       101 ~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        101 VCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCCCCCccCCHHHHHHHHHHhcC
Confidence            999999999999999999886654

>PHA02768 hypothetical protein; Provisional

Probab=98.60  E-value=1.2e-08  Score=67.53  Aligned_cols=43  Identities=16%  Similarity=0.230  Sum_probs=25.0

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHH
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANL  105 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l  105 (434)
                      .|.|+.||+.|...+.|..|+++|+  ++|+|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            3556666666666666666666665  455666666655544443

>PHA02768 hypothetical protein; Provisional

Probab=98.55  E-value=3.6e-08  Score=65.35  Aligned_cols=42  Identities=19%  Similarity=0.418  Sum_probs=22.4

Q ss_pred             eeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHH
Q psy8251          90 YICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFV  133 (434)
Q Consensus        90 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L  133 (434)
                      |.|+.||+.|...++|..|+++|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            455555555555555555555555  345555555555544443

>KOG3993|consensus

Probab=98.45  E-value=4.3e-08  Score=91.04  Aligned_cols=140  Identities=17%  Similarity=0.261  Sum_probs=93.4

Q ss_pred             CCCccccccCCHHHHHHHHHHcCCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCC------------------------
Q psy8251           1 MWPRGFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPR------------------------   56 (434)
Q Consensus         1 ~C~~C~~~F~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~------------------------   56 (434)
                      +|..|...|.+.-.|.+|.-..--...|. |++|+|.|+-..+|..|.+ .|....                        
T Consensus       269 iCqLCK~kYeD~F~LAQHrC~RIV~vEYr-CPEC~KVFsCPANLASHRR-WHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  269 ICQLCKEKYEDAFALAQHRCPRIVHVEYR-CPECDKVFSCPANLASHRR-WHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHhhhhHHHHhhccCCeeEEeeec-CCcccccccCchhhhhhhc-ccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            47778888888888888864332234577 8888888888888888877 552110                        


Q ss_pred             -----CCCCCeecCcCCcccCCHHHHHHHHHhccCCC-------------------------------------------
Q psy8251          57 -----SESSPWCCRFCNKRMMTKLSLGIHERIHTGQR-------------------------------------------   88 (434)
Q Consensus        57 -----~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-------------------------------------------   88 (434)
                           ..+..|.|.+|++.|.+...|+.|+.+|....                                           
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~  426 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAG  426 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeec
Confidence                 12235888888888888888888877663210                                           


Q ss_pred             ---ceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccC
Q psy8251          89 ---PYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus        89 ---~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                         ...|+.|+..+.++..-..+.+.-..+..|.|.+|...|.+...|.+|+...|.
T Consensus       427 sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  427 SAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             cccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence               022334444444433333333333334468999999999999999999886654

>KOG3993|consensus

Probab=98.43  E-value=1.5e-07  Score=87.58  Aligned_cols=101  Identities=26%  Similarity=0.485  Sum_probs=69.7

Q ss_pred             ceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccc-ccccccc-------------
Q psy8251          89 PYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGK-FGQKMSA-------------  154 (434)
Q Consensus        89 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~-------------  154 (434)
                      .|.|.+|...|.+.-.|.+|.-.-.-...|+|+.|+|+|.-..+|..|.|.|....... .......             
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            39999999999999999999643222234999999999999999999999996432111 0000000             


Q ss_pred             cccc-ccchhhhhhhhceecccCCcccCChhhHHHHhhhccCC
Q psy8251         155 LSGT-AFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGK  196 (434)
Q Consensus       155 ~~~~-~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~  196 (434)
                      .++. .....|. |..|      ++.|.....|+.|+.+|+..
T Consensus       347 rsg~dss~gi~~-C~~C------~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  347 RSGDDSSSGIFS-CHTC------GKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             ccCCcccCceee-cHHh------hhhhHHHHHHHHhHHhhhcc
Confidence            0000 1111244 6666      99999999999999888753

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.36  E-value=2e-07  Score=52.65  Aligned_cols=24  Identities=50%  Similarity=1.068  Sum_probs=12.4

Q ss_pred             HHchhhhcCCCCceeccccCcccC
Q psy8251         105 LLQHQPVHTGQRKYNCTVCGKAFS  128 (434)
Q Consensus       105 l~~H~~~h~~~~~~~C~~C~k~F~  128 (434)
                      |..|+++|++++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            445555555555555555555553

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.29  E-value=5.1e-07  Score=50.98  Aligned_cols=25  Identities=48%  Similarity=1.077  Sum_probs=19.3

Q ss_pred             HHHHHHHhccCCCceeccccccccc
Q psy8251          76 SLGIHERIHTGQRPYICDWCGVGFR  100 (434)
Q Consensus        76 ~L~~H~~~h~~~~~~~C~~C~~~f~  100 (434)
                      +|.+|+++|++++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4677888888888888888887775

...

>PHA00616 hypothetical protein

Probab=98.18  E-value=6.2e-07  Score=56.48  Aligned_cols=31  Identities=19%  Similarity=0.388  Sum_probs=28.2

Q ss_pred             cccCCccccccCCchhHHHHHHhhccCCCCC
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKKHDENGGSA  341 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~  341 (434)
                      ||.|+.||+.|.++++|.+|++.|+|++++.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccc
Confidence            7999999999999999999999999996443

>PHA00616 hypothetical protein

Probab=97.97  E-value=4e-06  Score=52.89  Aligned_cols=32  Identities=16%  Similarity=0.116  Sum_probs=16.3

Q ss_pred             eecCcCCcccCCHHHHHHHHHhccCCCceecc
Q psy8251          62 WCCRFCNKRMMTKLSLGIHERIHTGQRPYICD   93 (434)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   93 (434)
                      |+|..||+.|..+++|..|++.|++++++.|+
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            44555555555555555555555555554443

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.90  E-value=3.9e-06  Score=46.00  Aligned_cols=23  Identities=35%  Similarity=1.093  Sum_probs=21.8

Q ss_pred             ccCCccccccCCchhHHHHHHhh
Q psy8251         312 YDCDVCGAKFTQVGDMRRHRKKH  334 (434)
Q Consensus       312 f~C~~Cgk~F~~~~~L~~H~r~H  334 (434)
                      |.|+.||+.|.+...|.+|+++|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999985

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.85  E-value=1.2e-05  Score=58.80  Aligned_cols=18  Identities=33%  Similarity=0.447  Sum_probs=7.4

Q ss_pred             ccchhhhcCCHHHHHHHH
Q psy8251          31 CHICKETFYKHSELVRHL   48 (434)
Q Consensus        31 C~~C~~~f~~~~~L~~H~   48 (434)
                      |+.||+.|.+...|+.|+
T Consensus         4 C~~Cgk~F~s~s~Lk~H~   21 (79)
T PHA00732          4 CPICGFTTVTLFALKQHA   21 (79)
T ss_pred             CCCCCCccCCHHHHHHHh
Confidence            444444444444444443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.81  E-value=3.7e-05  Score=52.10  Aligned_cols=51  Identities=35%  Similarity=0.573  Sum_probs=34.6

Q ss_pred             CCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhcc
Q psy8251          28 FDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHT   85 (434)
Q Consensus        28 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (434)
                      |. |+.|++ ..+...|..|+...|.   .+.+.+.|++|...+.  .+|..|+..++
T Consensus         3 f~-CP~C~~-~~~~~~L~~H~~~~H~---~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FT-CPYCGK-GFSESSLVEHCEDEHR---SESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cC-CCCCCC-ccCHHHHHHHHHhHCc---CCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            55 888888 4556778888777774   2334677888877544  37777777654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=97.63  E-value=3.7e-05  Score=56.26  Aligned_cols=43  Identities=30%  Similarity=0.586  Sum_probs=21.2

Q ss_pred             eeccccccccccchHHHchhhh-cCCCCceeccccCcccCChhHHHhhhc
Q psy8251          90 YICDWCGVGFRSKANLLQHQPV-HTGQRKYNCTVCGKAFSRKSFVTTHMR  138 (434)
Q Consensus        90 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~k~F~~~~~L~~H~~  138 (434)
                      |.|..|++.|.+...|..|++. |.   ++.|+.|++.|.   .|..|++
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhc
Confidence            4555555555555555555543 32   134555555554   2444443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.60  E-value=2.9e-05  Score=42.84  Aligned_cols=24  Identities=29%  Similarity=0.952  Sum_probs=20.6

Q ss_pred             ccCCccccccCCchhHHHHHHhhc
Q psy8251         312 YDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       312 f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      |.|++|++.|.+...|+.|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999999875

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.54  E-value=4.3e-05  Score=41.73  Aligned_cols=23  Identities=57%  Similarity=1.125  Sum_probs=17.5

Q ss_pred             eeccccCcccCChhHHHhhhccc
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~h  140 (434)
                      |.|+.|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67788888888888888887653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.50  E-value=3.1e-05  Score=44.20  Aligned_cols=26  Identities=35%  Similarity=1.031  Sum_probs=24.2

Q ss_pred             cccCCccccccCCchhHHHHHHhhcc
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      ||.|+.|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999998863

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.40  E-value=0.00018  Score=48.73  Aligned_cols=47  Identities=23%  Similarity=0.508  Sum_probs=22.4

Q ss_pred             eecCcCCcccCCHHHHHHHHHhcc-CC-CceeccccccccccchHHHchhhh
Q psy8251          62 WCCRFCNKRMMTKLSLGIHERIHT-GQ-RPYICDWCGVGFRSKANLLQHQPV  111 (434)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~h~-~~-~~~~C~~C~~~f~~~~~l~~H~~~  111 (434)
                      |.|++|++ ..+...|..|....+ .+ +.+.|++|...+.  .+|..|+..
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            55666666 334455666654322 21 3455555554332  244445443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.18  E-value=0.00027  Score=40.25  Aligned_cols=26  Identities=38%  Similarity=0.761  Sum_probs=20.8

Q ss_pred             ceeccccCcccCChhHHHhhhccccC
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      ||.|..|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57888888888888888888877753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.16  E-value=0.00024  Score=39.03  Aligned_cols=24  Identities=46%  Similarity=1.017  Sum_probs=16.4

Q ss_pred             eeccccCcccCChhHHHhhhcccc
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      |.|++|++.|.+...|..|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            577778888888888888777653

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.05  E-value=0.00049  Score=53.24  Aligned_cols=24  Identities=29%  Similarity=0.639  Sum_probs=13.7

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhc
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIH   84 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h   84 (434)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            456666666666666666666543

>smart00355 ZnF_C2H2 zinc finger

Probab=97.02  E-value=0.00048  Score=38.49  Aligned_cols=24  Identities=29%  Similarity=0.800  Sum_probs=22.4

Q ss_pred             ccCCccccccCCchhHHHHHHhhc
Q psy8251         312 YDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       312 f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      |.|+.|+++|.+...|..|+++|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999875

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.01  E-value=0.00037  Score=53.91  Aligned_cols=23  Identities=30%  Similarity=0.791  Sum_probs=15.3

Q ss_pred             ceeccccCcccCChhHHHhhhcc
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRV  139 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~  139 (434)
                      .+.|..|++.|.+...|..|++.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHcC
Confidence            46777777777777777777764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.87  E-value=0.00036  Score=63.02  Aligned_cols=70  Identities=21%  Similarity=0.412  Sum_probs=41.5

Q ss_pred             CCCeecCc--CCcccCCHHHHHHHHHh-ccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHh
Q psy8251          59 SSPWCCRF--CNKRMMTKLSLGIHERI-HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTT  135 (434)
Q Consensus        59 ~~~~~C~~--C~~~f~~~~~L~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~  135 (434)
                      ++||+|++  |.+.++....|+-|+.. |-..+...          ...-..|.-.-...|||.|++|+|.|.....|+-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~----------~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHE----------NPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCC----------CCCccccccccccCCceeccccchhhccCcccee
Confidence            46777766  77777777777777542 11111100          0011111122345689999999999999999888


Q ss_pred             hhc
Q psy8251         136 HMR  138 (434)
Q Consensus       136 H~~  138 (434)
                      |+.
T Consensus       417 Hr~  419 (423)
T COG5189         417 HRK  419 (423)
T ss_pred             ccc
Confidence            864

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.71  E-value=0.0012  Score=42.57  Aligned_cols=33  Identities=27%  Similarity=0.596  Sum_probs=25.0

Q ss_pred             CCCCCcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +..+.|-.|++|+..+.+..+|++|+.++++.+
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            556789999999999999999999999988774

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2231|consensus

Probab=96.51  E-value=0.0052  Score=62.46  Aligned_cols=127  Identities=24%  Similarity=0.385  Sum_probs=78.1

Q ss_pred             CCCccccccC---------------CHHHHHHHHHHcCCCCCCCCccchh---------hhcCCHHHHHHHHHhhcCCCC
Q psy8251           1 MWPRGFRGFR---------------QVINLLKHRREHGGNLSFDNCHICK---------ETFYKHSELVRHLEREHNIPR   56 (434)
Q Consensus         1 ~C~~C~~~F~---------------~~~~l~~H~~~h~~~~~~~~C~~C~---------~~f~~~~~L~~H~~~~H~~~~   56 (434)
                      +|.+|++.|.               +...|+.|+...++  .+. |..|-         ....+...|..|+..--....
T Consensus       101 ~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~--~~~-c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~  177 (669)
T KOG2231|consen  101 SCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK--LHL-CSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDE  177 (669)
T ss_pred             hcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh--hhc-cccccccceeeeeeeehehHHHHHHHHhcCCCccc
Confidence            4777777773               78899999954332  233 55442         223456677788762221011


Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc------ccccccchHHHchhhhcCCCCceecc--ccCc-cc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC------GVGFRSKANLLQHQPVHTGQRKYNCT--VCGK-AF  127 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~k-~F  127 (434)
                      .-..--.|..|...|-....|.+|++.++    |.|..|      +..|.....|..|.+.+|    |.|.  .|.- .|
T Consensus       178 s~rGhp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f  249 (669)
T KOG2231|consen  178 SCRGHPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKF  249 (669)
T ss_pred             cccCCccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC----cccccccccccee
Confidence            11122469999999999999999988765    566666      356777888888888655    7776  5542 33


Q ss_pred             CChhHHHhhhc
Q psy8251         128 SRKSFVTTHMR  138 (434)
Q Consensus       128 ~~~~~L~~H~~  138 (434)
                      .....+..|++
T Consensus       250 ~~~~~~ei~lk  260 (669)
T KOG2231|consen  250 YVAFELEIELK  260 (669)
T ss_pred             eehhHHHHHHH
Confidence            33334444444

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.51  E-value=0.0019  Score=41.72  Aligned_cols=32  Identities=16%  Similarity=0.448  Sum_probs=23.1

Q ss_pred             CCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         114 GQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       114 ~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .+.|-.|++|+..+++..+|++|+.+.|+.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            46788999999999999999999998888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.46  E-value=0.0014  Score=36.08  Aligned_cols=24  Identities=29%  Similarity=0.735  Sum_probs=19.9

Q ss_pred             ccCCccccccCCchhHHHHHHhhcc
Q psy8251         312 YDCDVCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       312 f~C~~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      |.|+.|+.... ...|.+|+++|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999999998 9999999999764

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.25  E-value=0.0015  Score=36.26  Aligned_cols=23  Identities=26%  Similarity=0.827  Sum_probs=21.3

Q ss_pred             ccCCccccccCCchhHHHHHHhh
Q psy8251         312 YDCDVCGAKFTQVGDMRRHRKKH  334 (434)
Q Consensus       312 f~C~~Cgk~F~~~~~L~~H~r~H  334 (434)
                      |.|++|++.|.+...|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999865

>smart00355 ZnF_C2H2 zinc finger

Probab=96.01  E-value=0.0036  Score=34.75  Aligned_cols=24  Identities=50%  Similarity=0.949  Sum_probs=18.3

Q ss_pred             eeccccCcccCChhHHHhhhcccc
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      |.|+.|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            567888888888888888877553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.82  E-value=0.0037  Score=56.69  Aligned_cols=69  Identities=20%  Similarity=0.374  Sum_probs=43.9

Q ss_pred             CCCceeccc--cCcccCChhHHHhhhcccc-CCcccc--cccccccccccccchhhhhhhhceecccCCcccCChhhHHH
Q psy8251         114 GQRKYNCTV--CGKAFSRKSFVTTHMRVHT-GKLTGK--FGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTT  188 (434)
Q Consensus       114 ~~~~~~C~~--C~k~F~~~~~L~~H~~~h~-~~~~~~--~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~  188 (434)
                      +++||+|++  |+|.|++...|+-|+.--| ..+..+  ...++..+  .+....|. |+.|      ++.+.+...|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F--~~~~KPYr-CevC------~KRYKNlNGLKY  416 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF--SAKDKPYR-CEVC------DKRYKNLNGLKY  416 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc--cccCCcee-cccc------chhhccCcccee
Confidence            358999986  9999999999999987432 222111  11111111  11222244 5555      999999999999


Q ss_pred             Hhh
Q psy8251         189 HMR  191 (434)
Q Consensus       189 H~~  191 (434)
                      |..
T Consensus       417 Hr~  419 (423)
T COG5189         417 HRK  419 (423)
T ss_pred             ccc
Confidence            875

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.79  E-value=0.0063  Score=33.71  Aligned_cols=23  Identities=30%  Similarity=0.833  Sum_probs=18.2

Q ss_pred             eeccccCcccCChhHHHhhhccc
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~h  140 (434)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67888888888888888887653

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.53  E-value=0.0076  Score=33.03  Aligned_cols=24  Identities=33%  Similarity=0.649  Sum_probs=16.1

Q ss_pred             eeccccCcccCChhHHHhhhccccC
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      |+|+.|+.... +..|.+|++.+++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            67788887777 7778888777653

>KOG2231|consensus

Probab=95.40  E-value=0.024  Score=57.77  Aligned_cols=95  Identities=19%  Similarity=0.420  Sum_probs=64.0

Q ss_pred             hcCCHHHHHHHHHhhcCCCCCCCCCeecCcCC---------cccCCHHHHHHHHHhccC-CC----ceeccccccccccc
Q psy8251          37 TFYKHSELVRHLEREHNIPRSESSPWCCRFCN---------KRMMTKLSLGIHERIHTG-QR----PYICDWCGVGFRSK  102 (434)
Q Consensus        37 ~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~---------~~f~~~~~L~~H~~~h~~-~~----~~~C~~C~~~f~~~  102 (434)
                      .|.+...|+.|+...|.       .+.|..|-         ...-+...|..|++.-.. ++    .-.|..|...|...
T Consensus       123 ~~~s~~~Lk~H~~~~H~-------~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~  195 (669)
T KOG2231|consen  123 EFKSVENLKNHMRDQHK-------LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDD  195 (669)
T ss_pred             chhHHHHHHHHHHHhhh-------hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccH
Confidence            33478899999987773       33344433         222345677888764322 11    24688899999999


Q ss_pred             hHHHchhhhcCCCCceeccccC------cccCChhHHHhhhccccC
Q psy8251         103 ANLLQHQPVHTGQRKYNCTVCG------KAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       103 ~~l~~H~~~h~~~~~~~C~~C~------k~F~~~~~L~~H~~~h~~  142 (434)
                      ..|.+|++.++    |.|..|+      ..|.....|..|.+.+|-
T Consensus       196 ~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~Hf  237 (669)
T KOG2231|consen  196 DELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHF  237 (669)
T ss_pred             HHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcCc
Confidence            99999988665    6666664      457778889999887763

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.18  E-value=0.0038  Score=35.43  Aligned_cols=22  Identities=27%  Similarity=0.764  Sum_probs=20.7

Q ss_pred             ccCCccccccCCchhHHHHHHh
Q psy8251         312 YDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       312 f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.97  E-value=0.015  Score=32.94  Aligned_cols=22  Identities=32%  Similarity=0.762  Sum_probs=17.5

Q ss_pred             eeccccCcccCChhHHHhhhcc
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRV  139 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~  139 (434)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.88  E-value=0.015  Score=48.82  Aligned_cols=36  Identities=31%  Similarity=0.802  Sum_probs=21.1

Q ss_pred             ceeccccccccccchHHHchhhhcCCCCceeccccCcccC
Q psy8251          89 PYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFS  128 (434)
Q Consensus        89 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~  128 (434)
                      +|.|. |+.   ....+.+|.++|.++++|.|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            46665 655   4445556666666666666666666554

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.85  E-value=0.018  Score=31.93  Aligned_cols=21  Identities=33%  Similarity=0.823  Sum_probs=18.6

Q ss_pred             ccCCccccccCCchhHHHHHHh
Q psy8251         312 YDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       312 f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      ..|+.||++| ....|.+|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 88999999865

>PRK04860 hypothetical protein; Provisional

Probab=94.73  E-value=0.019  Score=48.31  Aligned_cols=40  Identities=30%  Similarity=0.740  Sum_probs=33.6

Q ss_pred             CCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccch
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKA  103 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~  103 (434)
                      -+|.|. |+.   ....+.+|.++|.++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            469998 987   5678899999999999999999998886543

>KOG2482|consensus

Probab=93.87  E-value=0.17  Score=46.69  Aligned_cols=51  Identities=20%  Similarity=0.439  Sum_probs=37.3

Q ss_pred             eeccccccccccchHHHchhhhcCC---------------------------CCceeccccCcccCChhHHHhhhccc
Q psy8251          90 YICDWCGVGFRSKANLLQHQPVHTG---------------------------QRKYNCTVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus        90 ~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------~~~~~C~~C~k~F~~~~~L~~H~~~h  140 (434)
                      ..|-.|.....+...|..|+..-+.                           ...-.|-.|...|..+..|..||..+
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            4788888888888888888875321                           01235788888999999999998743

>KOG1146|consensus

Probab=93.52  E-value=0.027  Score=60.87  Aligned_cols=137  Identities=18%  Similarity=0.228  Sum_probs=88.5

Q ss_pred             CccccccCCHHHHHHHHHH-cCCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCC--------------------CCCCC
Q psy8251           3 PRGFRGFRQVINLLKHRRE-HGGNLSFDNCHICKETFYKHSELVRHLEREHNIPR--------------------SESSP   61 (434)
Q Consensus         3 ~~C~~~F~~~~~l~~H~~~-h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~--------------------~~~~~   61 (434)
                      ..|+..+.....+..|+.. +.-.+.+. |+.|+..|.....|-.|++..|....                    .+.++
T Consensus       440 ~~~e~~~~s~r~~~~~t~~L~S~~kt~~-cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  440 TKAEPLLESKRSLEGQTVVLHSFFKTLK-CPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             cchhhhhhhhcccccceeeeeccccccc-CCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            3445555555555555443 44456677 99999999999999999886552111                    12457


Q ss_pred             eecCcCCcccCCHHHHHHHHHh--ccC-----------------------------------------CCceeccccccc
Q psy8251          62 WCCRFCNKRMMTKLSLGIHERI--HTG-----------------------------------------QRPYICDWCGVG   98 (434)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~--h~~-----------------------------------------~~~~~C~~C~~~   98 (434)
                      |.|..|...+..+.+|.+|++.  |..                                         .-.+.|.+|+..
T Consensus       519 ~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~ye  598 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYE  598 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcch
Confidence            8888888888888888888753  100                                         012677777777


Q ss_pred             cccchHHHchhhhc-CCCCceeccccCcccCChhHHHhhhccc
Q psy8251          99 FRSKANLLQHQPVH-TGQRKYNCTVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus        99 f~~~~~l~~H~~~h-~~~~~~~C~~C~k~F~~~~~L~~H~~~h  140 (434)
                      -.-..+|..|+..- +...|..|..++..+.....+..+.+.+
T Consensus       599 tniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  599 TNIARNLRIHMTASPSSSPPSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             hhhhhccccccccCCCCCChHHHhhhcchhhccccccCcCCCC
Confidence            77777777776543 3333466666776666666666666555

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.30  E-value=0.079  Score=29.32  Aligned_cols=20  Identities=30%  Similarity=0.192  Sum_probs=12.5

Q ss_pred             CCCccccccCCHHHHHHHHHH
Q psy8251           1 MWPRGFRGFRQVINLLKHRRE   21 (434)
Q Consensus         1 ~C~~C~~~F~~~~~l~~H~~~   21 (434)
                      .|+.||+.| ....|..|+..
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            366777777 55666666543

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=92.62  E-value=0.13  Score=47.43  Aligned_cols=78  Identities=21%  Similarity=0.366  Sum_probs=44.0

Q ss_pred             eecCc--CCcccCCHHHHHHHHHhccCCCceeccccc---cccc------cchHHHchhhhcCCCC----ceeccccCcc
Q psy8251          62 WCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCG---VGFR------SKANLLQHQPVHTGQR----KYNCTVCGKA  126 (434)
Q Consensus        62 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~---~~f~------~~~~l~~H~~~h~~~~----~~~C~~C~k~  126 (434)
                      |.|+.  |.........|..|.+..++.  +.|.+|-   +.|.      +...|..|...-..+.    .-.|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            55665  555555566777777655542  5566653   2222      3445555544322221    1357777777


Q ss_pred             cCChhHHHhhhcccc
Q psy8251         127 FSRKSFVTTHMRVHT  141 (434)
Q Consensus       127 F~~~~~L~~H~~~h~  141 (434)
                      |-+-..|.+|++..|
T Consensus       230 FYdDDEL~~HcR~~H  244 (493)
T COG5236         230 FYDDDELRRHCRLRH  244 (493)
T ss_pred             ecChHHHHHHHHhhh
Confidence            777777777777544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.25  E-value=0.078  Score=31.93  Aligned_cols=24  Identities=25%  Similarity=0.520  Sum_probs=21.5

Q ss_pred             CcccCCccccccCCchhHHHHHHh
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      .+|.|++|++.|.+...+..|++.
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            368999999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=91.31  E-value=0.041  Score=47.98  Aligned_cols=41  Identities=27%  Similarity=0.720  Sum_probs=26.9

Q ss_pred             ccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHH
Q psy8251          31 CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIH   80 (434)
Q Consensus        31 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H   80 (434)
                      |.+|+..|.+...|..|++..         -|+|.+|.+.+.+--.|..|
T Consensus        13 cwycnrefddekiliqhqkak---------hfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAK---------HFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhhc---------cceeeeehhhhccCCCceee
Confidence            777777777777777776533         37777777665555555555

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.31  E-value=0.04  Score=54.71  Aligned_cols=51  Identities=27%  Similarity=0.468  Sum_probs=33.3

Q ss_pred             cccccccchHHHchhhhcCCCC--ceeccccCcccCChhHHHhhhccccCCcc
Q psy8251          95 CGVGFRSKANLLQHQPVHTGQR--KYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus        95 C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      |...+.....+..|...|....  .+.+..|.+.|.....+..|++.+....+
T Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         394 CIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             hhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCc
Confidence            4444455555555555444433  46677888888888888888888776554

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.61  E-value=0.067  Score=53.07  Aligned_cols=63  Identities=27%  Similarity=0.462  Sum_probs=49.1

Q ss_pred             CCeecCcCCcccCCHHHHHHHHH--hccCC--Cceecc--ccccccccchHHHchhhhcCCCCceeccc
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHER--IHTGQ--RPYICD--WCGVGFRSKANLLQHQPVHTGQRKYNCTV  122 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  122 (434)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...|.+..++.+..
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKL  356 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccc
Confidence            46778888888888888888888  78888  788888  68888888888888888887777666643

>KOG1146|consensus

Probab=90.42  E-value=0.08  Score=57.49  Aligned_cols=92  Identities=16%  Similarity=0.250  Sum_probs=59.7

Q ss_pred             ccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhh
Q psy8251          31 CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQP  110 (434)
Q Consensus        31 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  110 (434)
                      |..|++.|...-.+. |+-.        ...|.|..|...|.....|..|.           ..|-+.+.......-|..
T Consensus      1263 c~~~~~~~~~~~~~~-~l~~--------~~~~~~~~~~~~~~~~~~l~~~~-----------~k~~~~~~~~~~~~~~~l 1322 (1406)
T KOG1146|consen 1263 CGAVDELLTPSFGIS-TLDV--------THRYLCRQCKMAFDGEAPLTAHQ-----------RKFCFAGRGSGGSMPPPL 1322 (1406)
T ss_pred             hhhccccccCcccee-eccc--------chhHHHHHHHhhhcchhHHHHHH-----------HHHHhccCccccCCCCcc
Confidence            666666666655555 4432        23566666666666666666664           223344444455555555


Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      .+....+| |..|...|.....|+.|++.-+++
T Consensus      1323 ~~~d~~~~-c~~c~~~~~~~~alqihm~~~~~~ 1354 (1406)
T KOG1146|consen 1323 RVPDCTYH-CLACEVLLSGREALQIHMRSSAHR 1354 (1406)
T ss_pred             cCcccccc-chHHHhhcchhHHHHHHHHHhhhc
Confidence            56666667 999999999999999999964443

>KOG2785|consensus

Probab=89.80  E-value=1.1  Score=42.44  Aligned_cols=137  Identities=21%  Similarity=0.226  Sum_probs=86.3

Q ss_pred             CCCccccccCCHHHHHHHHHH--cC-----------------------------------CCCCCCCccchhhhcCCHHH
Q psy8251           1 MWPRGFRGFRQVINLLKHRRE--HG-----------------------------------GNLSFDNCHICKETFYKHSE   43 (434)
Q Consensus         1 ~C~~C~~~F~~~~~l~~H~~~--h~-----------------------------------~~~~~~~C~~C~~~f~~~~~   43 (434)
                      +|..|...|.+...-+.|+++  |.                                   ++.++. |.+|.+.|.+...
T Consensus         5 tC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~-c~~c~k~~~s~~a   83 (390)
T KOG2785|consen    5 TCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVY-CEACNKSFASPKA   83 (390)
T ss_pred             eeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhccccee-hHHhhccccChhh
Confidence            599999999999999999765  21                                   234566 9999999999998


Q ss_pred             HHHHHHhh-cCCCC---C--C------CCCee-------------cCcCCcccCCHHHHHHHH------Hhc------cC
Q psy8251          44 LVRHLERE-HNIPR---S--E------SSPWC-------------CRFCNKRMMTKLSLGIHE------RIH------TG   86 (434)
Q Consensus        44 L~~H~~~~-H~~~~---~--~------~~~~~-------------C~~C~~~f~~~~~L~~H~------~~h------~~   86 (434)
                      ...|+... |....   .  +      .....             +..+-...........+.      .+-      ..
T Consensus        84 ~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~e  163 (390)
T KOG2785|consen   84 HENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDEDE  163 (390)
T ss_pred             HHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchhcc
Confidence            88887522 10000   0  0      00011             111211221111111111      111      11


Q ss_pred             CCceeccccccccccchHHHchhhhcCCC-----------------------CceeccccC---cccCChhHHHhhhc
Q psy8251          87 QRPYICDWCGVGFRSKANLLQHQPVHTGQ-----------------------RKYNCTVCG---KAFSRKSFVTTHMR  138 (434)
Q Consensus        87 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---k~F~~~~~L~~H~~  138 (434)
                      ..|-.|-.|++.+.+...-..||..++|-                       ..|.|-.|+   +.|.+-...+.||.
T Consensus       164 ~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  164 LIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             cCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            13467888999998888888888877652                       147899999   99999999999987

>KOG2482|consensus

Probab=89.73  E-value=0.88  Score=42.22  Aligned_cols=180  Identities=18%  Similarity=0.235  Sum_probs=89.9

Q ss_pred             HHHHHHHHHcCCCCCCCCccchhhhc-CCHHHHHHHHHhhcCCCCCC-----------------CCCeecCcCCcccCCH
Q psy8251          13 INLLKHRREHGGNLSFDNCHICKETF-YKHSELVRHLEREHNIPRSE-----------------SSPWCCRFCNKRMMTK   74 (434)
Q Consensus        13 ~~l~~H~~~h~~~~~~~~C~~C~~~f-~~~~~L~~H~~~~H~~~~~~-----------------~~~~~C~~C~~~f~~~   74 (434)
                      ..|..|++...+..-...|-.|...+ .+++....|+-..|+.....                 -..+.|-.|.+.|..+
T Consensus       129 eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdk  208 (423)
T KOG2482|consen  129 EALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDK  208 (423)
T ss_pred             HHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCc
Confidence            34556665543332222388887664 56677778887667532110                 1136788888999888


Q ss_pred             HHHHHHHHhc--cCCCc--------eeccc--ccccccc-chHHH-----chhhhc--------CCCCc--eeccccCcc
Q psy8251          75 LSLGIHERIH--TGQRP--------YICDW--CGVGFRS-KANLL-----QHQPVH--------TGQRK--YNCTVCGKA  126 (434)
Q Consensus        75 ~~L~~H~~~h--~~~~~--------~~C~~--C~~~f~~-~~~l~-----~H~~~h--------~~~~~--~~C~~C~k~  126 (434)
                      ..|+.||+.-  ..-.|        |.=..  =|++... .+.+.     .+...-        .+..+  .+|-.|...
T Consensus       209 ntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~  288 (423)
T KOG2482|consen  209 NTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNF  288 (423)
T ss_pred             HHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccc
Confidence            8888888743  22212        22111  1222111 01110     000000        01112  589999999


Q ss_pred             cCChhHHHhhhccccCCccccccccccc-ccccccchhhhhhhhc-eecccCCcccCChhhHHHHhhh
Q psy8251         127 FSRKSFVTTHMRVHTGKLTGKFGQKMSA-LSGTAFAVEYEIIQEC-LFAKNGGKAFSRKSFVTTHMRV  192 (434)
Q Consensus       127 F~~~~~L~~H~~~h~~~~~~~~~~~~~~-~~~~~~~~~~~~C~~C-~~C~~C~~~F~~~~~L~~H~~~  192 (434)
                      ..+...|..||..-|.-.-.+....... .=+.....+|.+=..| ..|-.|.-.|.....|..||--
T Consensus       289 ~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  289 YENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             hhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            9999999999986543211110000000 0000011111100000 1223338889999999988864

>smart00451 ZnF_U1 U1-like zinc finger

Probab=89.64  E-value=0.26  Score=29.60  Aligned_cols=23  Identities=22%  Similarity=0.634  Sum_probs=19.9

Q ss_pred             ceeccccCcccCChhHHHhhhcc
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRV  139 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~  139 (434)
                      +|.|+.|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=89.47  E-value=0.52  Score=43.69  Aligned_cols=94  Identities=24%  Similarity=0.395  Sum_probs=61.4

Q ss_pred             CHHHHHHHHHHcCCC---CCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCC----cccCCHHHHHHHHHh
Q psy8251          11 QVINLLKHRREHGGN---LSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCN----KRMMTKLSLGIHERI   83 (434)
Q Consensus        11 ~~~~l~~H~~~h~~~---~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~----~~f~~~~~L~~H~~~   83 (434)
                      +...|+.|...-..+   +....|..|...|.+-..|.+|++..|      ++-|.|..-+    .-|.+...|..|.+.
T Consensus       200 ~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H------E~ChICD~v~p~~~QYFK~Y~~Le~HF~~  273 (493)
T COG5236         200 RSSTLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH------EACHICDMVGPIRYQYFKSYEDLEAHFRN  273 (493)
T ss_pred             ecccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhh------hhhhhhhccCccchhhhhCHHHHHHHhhc
Confidence            345677775432222   223349999999999999999999777      3444444332    237788888888764


Q ss_pred             ccCCCceeccc--cc----cccccchHHHchhhhcCC
Q psy8251          84 HTGQRPYICDW--CG----VGFRSKANLLQHQPVHTG  114 (434)
Q Consensus        84 h~~~~~~~C~~--C~----~~f~~~~~l~~H~~~h~~  114 (434)
                      -+    |.|..  |.    ..|.....|..|+..-++
T Consensus       274 ~h----y~ct~qtc~~~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         274 AH----YCCTFQTCRVGKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             Cc----eEEEEEEEecCcEEEeccHHHHHHHHHHHhh
Confidence            33    66654  42    367888888899765443

>PF04838 Baculo_LEF5: Baculoviridae late expression factor 5 ; InterPro: IPR006923 This is a family of Baculoviridae late expression factor 5, required for late and very late gene expression

Probab=87.04  E-value=0.19  Score=40.66  Aligned_cols=29  Identities=41%  Similarity=0.458  Sum_probs=25.3

Q ss_pred             eecccceeeeeeccceeeecccccccccc
Q psy8251         397 FTNFNVKTQILNLTSTFHLFHPLTKYNLS  425 (434)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (434)
                      ..+.|||-.-+|..||||+||-|..|.-+
T Consensus        27 nyp~nVKNkTFNF~nTGHlFHsLYAYvP~   55 (159)
T PF04838_consen   27 NYPKNVKNKTFNFANTGHLFHSLYAYVPS   55 (159)
T ss_pred             hcccccccCeeecCCCchhhhhhhhccCC
Confidence            45669999999999999999999999754

; GO: 0006355 regulation of transcription, DNA-dependent

>KOG2893|consensus

Probab=86.88  E-value=0.26  Score=43.10  Aligned_cols=42  Identities=24%  Similarity=0.488  Sum_probs=33.7

Q ss_pred             cCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchh
Q psy8251          64 CRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQ  109 (434)
Q Consensus        64 C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  109 (434)
                      |.+|++.|....-|.+|++..+    |+|.+|-+.+.+-..|..|-
T Consensus        13 cwycnrefddekiliqhqkakh----fkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc----ceeeeehhhhccCCCceeeh
Confidence            8889999998888888877543    88988888877777777773

>KOG2785|consensus

Probab=86.22  E-value=1.7  Score=41.23  Aligned_cols=161  Identities=20%  Similarity=0.275  Sum_probs=92.0

Q ss_pred             CCCCccchhhhcCCHHHHHHHHHhh-c---------CCC----------------------CCCCCCeecCcCCcccCCH
Q psy8251          27 SFDNCHICKETFYKHSELVRHLERE-H---------NIP----------------------RSESSPWCCRFCNKRMMTK   74 (434)
Q Consensus        27 ~~~~C~~C~~~f~~~~~L~~H~~~~-H---------~~~----------------------~~~~~~~~C~~C~~~f~~~   74 (434)
                      .|. |.-|...|.+...-+.|++.. |         ..+                      .....++.|..|.+.|.+.
T Consensus         3 ~ft-C~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~   81 (390)
T KOG2785|consen    3 GFT-CNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASP   81 (390)
T ss_pred             cce-eeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccCh
Confidence            355 999999999999999998621 2         000                      0123468899999999999


Q ss_pred             HHHHHHHHhccCC-----------------Ccee-------------ccccccccccchHHHchhhh------------c
Q psy8251          75 LSLGIHERIHTGQ-----------------RPYI-------------CDWCGVGFRSKANLLQHQPV------------H  112 (434)
Q Consensus        75 ~~L~~H~~~h~~~-----------------~~~~-------------C~~C~~~f~~~~~l~~H~~~------------h  112 (434)
                      .....|+..-...                 ....             +..+............+...            -
T Consensus        82 ~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e  161 (390)
T KOG2785|consen   82 KAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDE  161 (390)
T ss_pred             hhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchh
Confidence            9888887532110                 0011             11111111111111111110            0


Q ss_pred             CCCCceeccccCcccCChhHHHhhhccccCCccccc----ccc-cccccccccchhhhhhhhceecccCCcccCChhhHH
Q psy8251         113 TGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKF----GQK-MSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVT  187 (434)
Q Consensus       113 ~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~----~~~-~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~  187 (434)
                      ....|-.|-.|++.+.+-..-..||..+||-.....    ... ....-+......+    .|++|..=++.|.+....+
T Consensus       162 ~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~----~CL~CN~~~~~f~sleavr  237 (390)
T KOG2785|consen  162 DELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGF----ICLFCNELGRPFSSLEAVR  237 (390)
T ss_pred             cccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCc----eEEEeccccCcccccHHHH
Confidence            011257799999999999999999999887433110    000 0000111111222    2444443349999999999


Q ss_pred             HHhhh
Q psy8251         188 THMRV  192 (434)
Q Consensus       188 ~H~~~  192 (434)
                      .||+.
T Consensus       238 ~HM~~  242 (390)
T KOG2785|consen  238 AHMRD  242 (390)
T ss_pred             HHHhh
Confidence            99974

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=86.20  E-value=0.42  Score=31.55  Aligned_cols=31  Identities=23%  Similarity=0.620  Sum_probs=23.5

Q ss_pred             cCCCCCCCCccchhhhcCCHHHHHHHHHhhcC
Q psy8251          22 HGGNLSFDNCHICKETFYKHSELVRHLEREHN   53 (434)
Q Consensus        22 h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   53 (434)
                      ..|+.-+. |+.||..|....++.+|....|+
T Consensus        12 RDGE~~lr-CPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          12 RDGEEFLR-CPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             cCCceeee-CCchhHHHHHhHHHHHHhhHHhh
Confidence            34565566 88888888888888888877774

>KOG4173|consensus

Probab=85.62  E-value=0.33  Score=41.55  Aligned_cols=75  Identities=25%  Similarity=0.489  Sum_probs=48.2

Q ss_pred             ccc--hhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHh----------ccCCCceeccc--cc
Q psy8251          31 CHI--CKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERI----------HTGQRPYICDW--CG   96 (434)
Q Consensus        31 C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~----------h~~~~~~~C~~--C~   96 (434)
                      |++  |...|.+......|...-|        ...|..|.+.|.+...|..|+..          -.|...|.|-+  |+
T Consensus        82 cqvagc~~~~d~lD~~E~hY~~~h--------~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   82 CQVAGCCQVFDALDDYEHHYHTLH--------GNSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             ccccchHHHHhhhhhHHHhhhhcc--------cchhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            654  6666777666666654444        34577777777777777777642          23445677854  88


Q ss_pred             cccccchHHHchhh-hcC
Q psy8251          97 VGFRSKANLLQHQP-VHT  113 (434)
Q Consensus        97 ~~f~~~~~l~~H~~-~h~  113 (434)
                      ..|.+...-+.|+- +|.
T Consensus       154 ~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhhHHHHhcc
Confidence            88888777777753 443

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=84.67  E-value=0.51  Score=28.06  Aligned_cols=10  Identities=40%  Similarity=1.112  Sum_probs=4.9

Q ss_pred             CceeccccCc
Q psy8251         116 RKYNCTVCGK  125 (434)
Q Consensus       116 ~~~~C~~C~k  125 (434)
                      .++.|++|+.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            3455555543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=82.29  E-value=0.52  Score=31.15  Aligned_cols=32  Identities=25%  Similarity=0.515  Sum_probs=25.7

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccC
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      .-.|+.-+.|+-|++.|....++.+|+..-|+
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            34567778999999999999999999876554

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=80.30  E-value=1.2  Score=29.98  Aligned_cols=46  Identities=22%  Similarity=0.366  Sum_probs=30.3

Q ss_pred             cccccCCCC-CCC--CCcccccCCCCCCCcchhhhhccccchhhhhcccccccCCCCCcccCCccccc
Q psy8251         256 SCISQGKGS-KEK--KDDEENEYGKPEDFIPDVFQAEFSKENDKLLSYLEFCDHHCDRPYDCDVCGAK  320 (434)
Q Consensus       256 ~C~~c~~~~-~~~--~~~~c~~c~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~H~~~k~f~C~~Cgk~  320 (434)
                      .|+.||..- ..+  ..|.|+.||....+-+..++.                   -..+|.|+.||..
T Consensus        11 ~CtSCg~~i~p~e~~v~F~CPnCGe~~I~Rc~~CRk-------------------~g~~Y~Cp~CGF~   59 (61)
T COG2888          11 VCTSCGREIAPGETAVKFPCPNCGEVEIYRCAKCRK-------------------LGNPYRCPKCGFE   59 (61)
T ss_pred             eeccCCCEeccCCceeEeeCCCCCceeeehhhhHHH-------------------cCCceECCCcCcc
Confidence            788888876 333  368899999764333333322                   1368999999963

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	434
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		9e-21
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-13
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-15
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-11
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		5e-14
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-12
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-12
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-11
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-10
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-10
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-10
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		5e-10
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		6e-10
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		5e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-09
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-09
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-09
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-09
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-09
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-09
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		6e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		4e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		6e-09
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		9e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-08
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-07
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		4e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		7e-08
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		3e-07
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		4e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-06
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		6e-05
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-04
2emw_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		6e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		6e-04
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2ysp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2eqw_A	42	Solution Structure Of The 6th C2h2 Type Zinc Finger		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 31  CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPY 90
           C  C ++F +   L  H +R H   +    P+ C  C K    K  L  H+R HTG++PY
Sbjct: 24  CPECGKSFSRSDHLAEH-QRTHTGEK----PYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78
Query: 91  ICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQ 150
            C  CG  F  +ANL  HQ  HTG++ Y C  CGK+FS+ + +  H R HTG+   K  +
Sbjct: 79  KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE 138
Query: 151 KMSALSGTAFAVEYEI--------IQECLFAKNGGKAFSRKSFVTTHMRVHTGKLT 198
                 G +F+ E  +         ++       GK+FSR+  +  H R HTGK T
Sbjct: 139 -----CGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 83  IHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
           +  G++PY C  CG  F    +L +HQ  HTG++ Y C  CGK+FS K  +T H R HTG
Sbjct: 15  LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG 74
Query: 143 KLTGKFGQKMSALSGTAFAVEYEII---QECLFAKNGGKAFSRKSFVTTHMRVHTGKLTG 199
           +   K  +   + S  A    ++     ++       GK+FS+ + +  H R HTG+   
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPY 134
Query: 200 KFGQKISALSGIRTQHLQIESHQTTQP 226
           K  +   + S     H    +H   +P
Sbjct: 135 KCPECGKSFSREDNLHTHQRTHTGEKP 161

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%)
Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           P+ C  C K      +L  H+R HTG++PY C  CG  F   ++L +HQ  HTG++ Y C
Sbjct: 4   PYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKC 63
Query: 121 TVCGKAFSRKSFVTTHMRVHTGK 143
             CGK+FSR   ++ H R H  K
Sbjct: 64  PECGKSFSRSDHLSRHQRTHQNK 86

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 25/110 (22%)
Query: 87  QRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTG 146
           ++PY C  CG  F   +NL +HQ  HTG++ Y C  CGK+FS+ S +  H R HTG+   
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 147 KFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGK 196
           K                     EC      GK+FSR   ++ H R H  K
Sbjct: 62  K-------------------CPEC------GKSFSRSDHLSRHQRTHQNK 86

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 64  CRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC 123
           C+ C K      +L  H  IH+  RPY C +CG  F  K+++ +H  +HTG++ + C VC
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 124 GKAFSRKSFVTTHMRVHTG 142
           GKAFS+ S + TH R HTG
Sbjct: 64  GKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 25/106 (23%)
Query: 90  YICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFG 149
           + C  CG  F+  + L  H  +H+  R Y C  CGK F +KS +  H  +HTG+   K  
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK-- 59
Query: 150 QKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
                             Q C      GKAFS+ S + TH R HTG
Sbjct: 60  -----------------CQVC------GKAFSQSSNLITHSRKHTG 82

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 57  SESSPWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVH 112
           SE  P+ C +  CNKR      L +H R HTG++PY CD+  C   F     L +HQ  H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 113 TGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
           TG + + C  C + FSR   + TH R HTG+
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE 92

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 54  IPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHT 113
           +P      + C+FC +      +L IHER HT +RPY CD C   FR + +L  H+ +H+
Sbjct: 10  LPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHS 69
Query: 114 GQRKYNCTVCGKAFSRKSFVTTHMRVH 140
            ++ + C  CGK F +   +  H  +H
Sbjct: 70  KEKPFKCQECGKGFCQSRTLAVHKTLH 96

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 87  QRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
            +PY CD C   FR K NL  H+ VHTG++ Y C +CG  F+R + + TH R+H+G+
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C    C++R   K +L  H RIHTGQ+P+ C  C   F  +A+L  H   HTG++ +
Sbjct: 4   PYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPF 63
Query: 119 NCTVCGKAFSRKSFVTTHMRVH 140
            C +CG+ F+     T H ++H
Sbjct: 64  ACDICGRKFATLHTRTRHTKIH 85

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTVCG 124
           C K       L  H R HTG++PY CDW  CG  F     L +H   HTG R + C  C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 125 KAFSRKSFVTTHMRVH 140
           +AFSR   +  HM+ H
Sbjct: 73  RAFSRSDHLALHMKRH 88

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 64  CRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQP---VHTGQRKYNC 120
           C  C+K+ ++K  L +H R HTG++P+ C  CG  +  K NLL+H+    ++  ++ + C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 121 TVCGKAFSRKSFVTTHMRVHTGKLTGK 147
           +VC + F R+  +  HM  HTG++  K
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYK 96

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTVCG 124
           C K       L  H R HTG++PY CDW  CG  F     L +H   HTG R + C  C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 125 KAFSRKSFVTTHMRVH 140
           +AFSR   +  HM+ H
Sbjct: 74  RAFSRSDHLALHMKRH 89

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 87  QRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHT 141
           ++PY C  CG  F   + L+QHQ VHTG++ Y C  CGKAFS+ S +  H R+HT
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 25/80 (31%)
Query: 115 QRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAK 174
           ++ Y C  CGKAFSR S +  H RVHTG+                    Y+ + EC    
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKP------------------YKCL-EC---- 48
Query: 175 NGGKAFSRKSFVTTHMRVHT 194
             GKAFS+ S +  H R+HT
Sbjct: 49  --GKAFSQNSGLINHQRIHT 66

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C    C++R   K +L  H RIHTGQ+P+ C  C   F     L QH   HTG++ +
Sbjct: 4   PYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPF 63
Query: 119 NCTVCGKAFSRKSFVTTHMRVH 140
            C +CG+ F+       H ++H
Sbjct: 64  ACDICGRKFATLHTRDRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C    C++R     SL  H RIHTGQ+P+ C  C   F    +L  H   HTG++ +
Sbjct: 4   PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 119 NCTVCGKAFSRKSFVTTHMRVH 140
            C +CG+ F+R      H ++H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C    C++R      L  H RIHTGQ+P+ C  C   F    +L  H   HTG++ +
Sbjct: 4   PYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 119 NCTVCGKAFSRKSFVTTHMRVH 140
            C +CG+ F+R      H ++H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C    C++R     +L  H RIHTGQ+P+ C  C   F    +L  H   HTG++ +
Sbjct: 4   PYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 119 NCTVCGKAFSRKSFVTTHMRVH 140
            C +CG+ F+R      H ++H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C    C++R      L  H RIHTGQ+P+ C  C   F    +L  H   HTG++ +
Sbjct: 4   PYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 119 NCTVCGKAFSRKSFVTTHMRVH 140
            C +CG+ F+R      H ++H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C    C++R      L  H RIHTGQ+P+ C  C   F    +L  H   HTG++ +
Sbjct: 4   PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 119 NCTVCGKAFSRKSFVTTHMRVH 140
            C +CG+ F+R      H ++H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C    C++R      L  H RIHTGQ+P+ C  C   F    +L  H   HTG++ +
Sbjct: 3   PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 62
Query: 119 NCTVCGKAFSRKSFVTTHMRVH 140
            C +CG+ F+R      H ++H
Sbjct: 63  ACDICGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C    C++R      L  H RIHTGQ+P+ C  C   F    +L  H   HTG++ +
Sbjct: 4   PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 119 NCTVCGKAFSRKSFVTTHMRVH 140
            C +CG+ F+R      H ++H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 41/85 (48%)
Query: 58  ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRK 117
            S P  C  C K    K  L  H R HTG +PY C  C       ++L +H  +H+ +R 
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP 64
Query: 118 YNCTVCGKAFSRKSFVTTHMRVHTG 142
           + C +C  A    S +T H+R HTG
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 25/107 (23%)
Query: 89  PYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKF 148
           P+ C+ CG  F  K  L  H   HTG + Y C  C  A +  S +  H+R+H+ +   K 
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK- 66
Query: 149 GQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
                              Q C +A          S +T H+R HTG
Sbjct: 67  ------------------CQICPYASR------NSSQLTVHLRSHTG 89

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 87  QRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
           +R Y CD CG  F   ++L +H+  HTG++ Y C  CGKAF ++S +  H RVHTG
Sbjct: 16  RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 25/81 (30%)
Query: 115 QRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAK 174
           +R+Y C  CGK+FS  S ++ H R HTG+   K                     EC    
Sbjct: 16  RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYK-------------------CDEC---- 52
Query: 175 NGGKAFSRKSFVTTHMRVHTG 195
             GKAF ++S +  H RVHTG
Sbjct: 53  --GKAFIQRSHLIGHHRVHTG 71

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 34  CKETFYKHSELVRHLEREHNIPRSESSPWC----CRFCNKRMMTKLSLGIHERIHTGQRP 89
           C  TF    ELV H+  EH     +++  C    C    K    K  L  H R+HTG++P
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 90
Query: 90  YICDWCGVG--FRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTGKLT 145
           + C + G G  F    NL  H+  HTG++ + C    C + F+  S    HM VHT   +
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS 150
Query: 146 G 146
           G
Sbjct: 151 G 151

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 34/146 (23%)
Query: 65  RFCNKRMMTKLSLGIHERI-HTG---QRPYICDW--C---GVGFRSKANLLQHQPVHTGQ 115
           + C++   T   L  H  + H G   Q  ++C W  C   G  F++K  L+ H  VHTG+
Sbjct: 29  KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE 88
Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFA 173
           + + C    CGK F+R   +  H R HTG+                F  E+E        
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIHKRTHTGE--------------KPFKCEFEGCD----- 129
Query: 174 KNGGKAFSRKSFVTTHMRVHTGKLTG 199
               + F+  S    HM VHT   +G
Sbjct: 130 ----RRFANSSDRKKHMHVHTSDKSG 151

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 57  SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQ- 115
           S SS   C  C K       L  H+  H+G++PY C  CG+ F+ K  +  H   H G  
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62
Query: 116 -RKYNCTVCGKAFSRKSFVTTHMR-VHTGKLTG 146
            + Y C  CGK FSR   +  H++ VH+G  +G
Sbjct: 63  GKPYICQSCGKGFSRPDHLNGHIKQVHSGPSSG 95

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 24/116 (20%)
Query: 85  TGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKL 144
           +G     C+ CG  FR   +L +H+  H+G++ Y+C VCG  F RK  ++ H+R H G +
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62
Query: 145 TGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMR-VHTGKLTG 199
              +                 I Q C      GK FSR   +  H++ VH+G  +G
Sbjct: 63  GKPY-----------------ICQSC------GKGFSRPDHLNGHIKQVHSGPSSG 95

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFR--SKANLLQHQPVHTGQRKYNCTVCG 124
           C K       L  H R HTG++PY C W G  +R      L +H   HTG + + C VC 
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 125 KAFSRKSFVTTHMRVH 140
           ++FSR   +  HM+ H
Sbjct: 83  RSFSRSDHLALHMKRH 98

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 55  PRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
           PR+ + P   + C K      ++  H   H G R ++C  CG  F   + L +HQ VHTG
Sbjct: 3   PRTIACPH--KGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG 59
Query: 115 QRKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
           ++ + CT   CGK FS    + TH+R+HTG
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 62  WCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           + C  C +  +   SL  H  IH+ ++ Y C +C   F       +H+  HTG+R+Y C 
Sbjct: 23  YICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCL 82
Query: 122 VCGKAFSRKSFVTTHMR-VHTGKLTG 146
            CGK+F    F+++H++ VH+   +G
Sbjct: 83  ACGKSFINYQFMSSHIKSVHSQDPSG 108

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 87  QRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
           +RP+ C++CG  +R  + L +H+  H G R  +C  CGK F  +S V  H++VH  K
Sbjct: 2   ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK 58

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K    K     H  +H G RPY C  CG  F+ K +L+ H  +HTG + Y C +C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 127 FS-RKSF 132
           F  R SF
Sbjct: 75  FMWRDSF 81

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 88  RPYIC--DWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHT 141
           RPY C  + C   F     L +H  +HTGQ+ + C +C + FSR   +TTH+R HT
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 81  ERIHTGQRPYICDWCGVG-----FRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFV 133
           E IH  ++ ++C W G       F+++  L+ H   HTG++ + CT   C K++SR   +
Sbjct: 26  EHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENL 85
Query: 134 TTHMRVHTGK 143
            TH+R HTG+
Sbjct: 86  KTHLRSHTGE 95

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 87  QRPYICDWCGVGFRSKANLLQHQPVHTGQR 116
           +RPYIC  CG  F  ++NL++HQ +HTG++
Sbjct: 10  ERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 90  YICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHM-RVHTGKL 144
           ++C+ C   F  + +L +H   HT ++ Y C +C +AF+R+  +  H  ++H+G L
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>pdb|2EMW|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 301- 331) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 113 TGQRKYNCTVCGKAFSRKSFVTTHMRVHTG-KLTG 146
           +G++ Y C  CGK FS KS++  H R+HTG KL+G
Sbjct: 6   SGEKPYGCNECGKDFSSKSYLIVHQRIHTGEKLSG 40

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 90  YICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMR 138
           YIC+ CG+  +  + L +H   HT  R Y+CT C  +F  K  +T HM+
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 67  CNKRMMTKLSLGIHERIHTGQRPYIC--DWCGVGFRSKANLLQHQPVHTGQRKYNCTV-- 122
           C         L  H   HTG++P+ C  + C  GF S  +L +H   HTG++ + C    
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 123 CGKAFSRKSFVTTHM-RVHTGKL---------TGKFGQKMSALSGTAFAVEYEIIQECLF 172
           C   F+ K+ +  H  R H  K+          GK  +K + L    F+   ++  EC  
Sbjct: 80  CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH 139
Query: 173 AKNGGKAFSRKSFVTTHMRVHTG 195
            +   K FS  S +  H +VH G
Sbjct: 140 -EGCDKRFSLPSRLKRHEKVHAG 161

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 87  QRPYICDWCGVGFRSKANLLQHQPVHTGQR 116
           ++PY+CD+CG  F   A L++HQ +HTG++
Sbjct: 10  EKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39

>pdb|2YSP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 507- 539) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 87  QRPYICDWCGVGFRSKANLLQHQPVHTGQR 116
           ++PY C+ CG G+ SK NL  HQ VHTG+R
Sbjct: 10  EKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39

>pdb|2EQW|A Chain A, Solution Structure Of The 6th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 484 Length = 42

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 113 TGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
           +G++ Y CT CGKAF RKS   TH R+HTG+
Sbjct: 6   SGEKPYVCTECGKAFIRKSHFITHERIHTGE 36

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	434
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-32
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-32
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-29
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-24
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-25
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-26
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-26
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-22
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-26
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-25
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-25
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-25
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-16
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-25
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-19
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-25
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-22
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-22
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-25
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-22
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-25
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-24
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-24
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-17
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-23
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-20
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-20
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-20
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-13
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-19
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-19
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-16
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-16
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-16
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-15
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-14
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-13
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-13
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-13
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-13
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-12
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-12
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-12
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-12
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-12
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-11
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-10
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-11
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-10
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	8e-10
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-09
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-09
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	5e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	8e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	7e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	8e-05
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	4e-04
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	6e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  120 bits (303), Expect = 2e-32
 Identities = 60/189 (31%), Positives = 83/189 (43%), Gaps = 35/189 (18%)

Query: 9   FRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCN 68
                + +       G   +  C  C ++F +   L  H +R H    +   P+ C  C 
Sbjct: 3   EFGSSSSVAQAALEPGEKPYA-CPECGKSFSRSDHLAEH-QRTH----TGEKPYKCPECG 56

Query: 69  KRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFS 128
           K    K  L  H+R HTG++PY C  CG  F  +ANL  HQ  HTG++ Y C  CGK+FS
Sbjct: 57  KSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFS 116

Query: 129 RKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YEIIQECLFAKNGGKAFSRKSFV 186
           + + +  H R HTG                    E  Y+   EC      GK+FSR+  +
Sbjct: 117 QLAHLRAHQRTHTG--------------------EKPYK-CPEC------GKSFSREDNL 149

Query: 187 TTHMRVHTG 195
            TH R HTG
Sbjct: 150 HTHQRTHTG 158

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  119 bits (302), Expect = 3e-32
 Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 35/189 (18%)

Query: 9   FRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCN 68
           F +  +L +H+R H G   +  C  C ++F    +L RH +R H    +   P+ C  C 
Sbjct: 31  FSRSDHLAEHQRTHTGEKPYK-CPECGKSFSDKKDLTRH-QRTH----TGEKPYKCPECG 84

Query: 69  KRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFS 128
           K    + +L  H+R HTG++PY C  CG  F   A+L  HQ  HTG++ Y C  CGK+FS
Sbjct: 85  KSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFS 144

Query: 129 RKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YEIIQECLFAKNGGKAFSRKSFV 186
           R+  + TH R HTG                    E  Y+   EC      GK+FSR+  +
Sbjct: 145 REDNLHTHQRTHTG--------------------EKPYKC-PEC------GKSFSRRDAL 177

Query: 187 TTHMRVHTG 195
             H R HTG
Sbjct: 178 NVHQRTHTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.0 bits (100), Expect = 9e-05
 Identities = 16/72 (22%), Positives = 20/72 (27%), Gaps = 29/72 (40%)

Query: 126 AFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YEIIQECLFAKNGGKAFSRK 183
           +    S       +  G                    E  Y    EC      GK+FSR 
Sbjct: 2   SEFGSSSSVAQAALEPG--------------------EKPYAC-PEC------GKSFSRS 34

Query: 184 SFVTTHMRVHTG 195
             +  H R HTG
Sbjct: 35  DHLAEHQRTHTG 46

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  108 bits (273), Expect = 7e-29
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQ---PVHTGQRK 117
              C  C+K+ ++K  L +H R HTG++P+ C  CG  +  K NLL+H+    ++  ++ 
Sbjct: 7   GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66

Query: 118 YNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YEIIQECLFAKN 175
           + C+VC + F R+  +  HM  HTG                    E  Y+    C     
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTG--------------------EMPYKC-SSC----- 100

Query: 176 GGKAFSRKSFVTTHM-RVHTGKLTG 199
             + F +K  + +HM ++H+G  +G
Sbjct: 101 -SQQFMQKKDLQSHMIKLHSGPSSG 124

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 95.3 bits (238), Expect = 6e-24
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 9/120 (7%)

Query: 31  CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHER---IHTGQ 87
           C  C + F     L  H  R+H    +   P+ C  C K    K +L  HE    ++  +
Sbjct: 10  CPTCHKKFLSKYYLKVH-NRKH----TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 88  RPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHM-RVHTGKLTG 146
           + + C  C   FR +  L  H   HTG+  Y C+ C + F +K  + +HM ++H+G  +G
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPSSG 124

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 93.3 bits (233), Expect = 3e-23
 Identities = 27/117 (23%), Positives = 39/117 (33%), Gaps = 32/117 (27%)

Query: 84  HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMR---VH 140
            +G     C  C   F SK  L  H   HTG++ + C  CGK + RK  +  H     ++
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 141 TGKLTGKFGQKMSALSGTAFAVE--YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
                                 E  +     C       + F R+  +  HM  HTG
Sbjct: 62  RS--------------------EQVFTC-SVC------QETFRRRMELRLHMVSHTG 91

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  103 bits (259), Expect = 1e-26
 Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 11/146 (7%)

Query: 6   FRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCR 65
               + +   L  +      LS      C  TF    ELV H     ++   E +   C 
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRP-KKSCDRTFSTMHELVTH-VTMEHVGGPEQNNHVCY 61

Query: 66  F-----CNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKY 118
           +       K    K  L  H R+HTG++P+ C +  CG  F    NL  H+  HTG++ +
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121

Query: 119 NCTV--CGKAFSRKSFVTTHMRVHTG 142
            C    C + F+  S    HM VHT 
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVHTS 147

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 98.5 bits (246), Expect = 9e-25
 Identities = 36/176 (20%), Positives = 58/176 (32%), Gaps = 45/176 (25%)

Query: 34  CKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPY--- 90
              +     + +   +               + C++   T   L  H  +     P    
Sbjct: 3   SGSSGQPIKQELSC-KWID----EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN 57

Query: 91  -ICDW-----CGVGFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
            +C W      G  F++K  L+ H  VHTG++ + C    CGK F+R   +  H R HTG
Sbjct: 58  HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG 117

Query: 143 KLTGKFGQKMSALSGTAFAVE--YE-IIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
                               E  ++   + C       + F+  S    HM VHT 
Sbjct: 118 --------------------EKPFKCEFEGC------DRRFANSSDRKKHMHVHTS 147

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 10/95 (10%)

Query: 3   PRGFRGFRQVINLLKHRREHGGNLSFDNCHI--CKETFYKHSELVRHLEREHNIPRSESS 60
           PR  + F+    L+ H R H G   F  C    C + F +   L  H  R H   +    
Sbjct: 66  PREGKSFKAKYKLVNHIRVHTGEKPFP-CPFPGCGKIFARSENLKIHK-RTHTGEK---- 119

Query: 61  PWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICD 93
           P+ C F  C++R         H  +HT  +     
Sbjct: 120 PFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  101 bits (254), Expect = 3e-26
 Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 31/132 (23%)

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTVCG 124
           CNKR      L +H R HTG++PY CD+  C   F     L +HQ  HTG + + C  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73

Query: 125 KAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YE-IIQECLFAKNGGKAFS 181
           + FSR   + TH R HTG                    E  +      C       K F+
Sbjct: 74  RKFSRSDHLKTHTRTHTG--------------------EKPFSCRWPSC------QKKFA 107

Query: 182 RKSFVTTHMRVH 193
           R   +  H  +H
Sbjct: 108 RSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 85.6 bits (213), Expect = 1e-20
 Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 33/117 (28%)

Query: 85  TGQRPYICD--WCGVGFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVH 140
           + +RP++C    C   +   ++L  H   HTG++ Y C    C + FSR   +  H R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 141 TGKLTGKFGQKMSALSGTAFAVE--YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
           TG                       ++  + C       + FSR   + TH R HTG
Sbjct: 62  TG--------------------VKPFQ-CKTC------QRKFSRSDHLKTHTRTHTG 91

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 83.0 bits (206), Expect = 1e-19
 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 9/111 (8%)

Query: 34  CKETFYKHSELVRHLEREHNIPRSESSPWCCRF--CNKRMMTKLSLGIHERIHTGQRPYI 91
           C + ++K S L  H  R+H    +   P+ C F  C +R      L  H+R HTG +P+ 
Sbjct: 14  CNKRYFKLSHLQMH-SRKH----TGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ 68

Query: 92  CDWCGVGFRSKANLLQHQPVHTGQRKYNC--TVCGKAFSRKSFVTTHMRVH 140
           C  C   F    +L  H   HTG++ ++C    C K F+R   +  H  +H
Sbjct: 69  CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 99.8 bits (250), Expect = 4e-26
 Identities = 34/79 (43%), Positives = 48/79 (60%)

Query: 64  CRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC 123
           C+ C K      +L  H  IH+  RPY C +CG  F  K+++ +H  +HTG++ + C VC
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 124 GKAFSRKSFVTTHMRVHTG 142
           GKAFS+ S + TH R HTG
Sbjct: 64  GKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 88.6 bits (221), Expect = 4e-22
 Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 29/108 (26%)

Query: 90  YICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFG 149
           + C  CG  F+  + L  H  +H+  R Y C  CGK F +KS +  H  +HTG       
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG------- 54

Query: 150 QKMSALSGTAFAVE--YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
                        E  ++  Q C      GKAFS+ S + TH R HTG
Sbjct: 55  -------------EKPHKC-QVC------GKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 31  CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPY 90
           C IC ++F + S L  H    H    S++ P+ C++C KR   K  +  H  IHTG++P+
Sbjct: 4   CKICGKSFKRSSTLSTH-LLIH----SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH 58

Query: 91  ICDWCGVGFRSKANLLQHQPVHTG 114
            C  CG  F   +NL+ H   HTG
Sbjct: 59  KCQVCGKAFSQSSNLITHSRKHTG 82

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 99.8 bits (250), Expect = 5e-26
 Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 29/114 (25%)

Query: 84  HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
                P+ C+ CG  F  K  L  H   HTG + Y C  C  A +  S +  H+R+H+  
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD- 61

Query: 144 LTGKFGQKMSALSGTAFAVE--YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
                              E  ++  Q C        A    S +T H+R HTG
Sbjct: 62  -------------------ERPFKC-QIC------PYASRNSSQLTVHLRSHTG 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 98.3 bits (246), Expect = 2e-25
 Identities = 29/82 (35%), Positives = 40/82 (48%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           P  C  C K    K  L  H R HTG +PY C  C       ++L +H  +H+ +R + C
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67

Query: 121 TVCGKAFSRKSFVTTHMRVHTG 142
            +C  A    S +T H+R HTG
Sbjct: 68  QICPYASRNSSQLTVHLRSHTG 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 66.7 bits (164), Expect = 4e-14
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 31  CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPY 90
           C +C + F +  +L  H  R H    +   P+ C+ C+       SL  H RIH+ +RP+
Sbjct: 11  CEVCGKCFSRKDKLKTH-MRCH----TGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65

Query: 91  ICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
            C  C    R+ + L  H   HTG    + 
Sbjct: 66  KCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  101 bits (255), Expect = 1e-25
 Identities = 44/192 (22%), Positives = 69/192 (35%), Gaps = 43/192 (22%)

Query: 16  LKHRREHGGNLSFD-NCHICKETFYKHSELVRHLEREHNIPRSESSPWCC--RFCNKRMM 72
           +  +        +  +   C   + K+ +L  H   +H   +    P+ C    C K   
Sbjct: 1   MGEKALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKHTGEK----PFPCKEEGCEKGFT 55

Query: 73  TKLSLGIHERIHTGQRPYICD--WCGVGFRSKANLLQHQPVHTGQRK--YNCTV--CGKA 126
           +   L  H   HTG++ + CD   C + F +KAN+ +H       +   Y C    CGKA
Sbjct: 56  SLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKA 115

Query: 127 FSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YEIIQE-CLFAKNGGKAFSRK 183
           F + + +  H   HT                     +  YE   E C       K FS  
Sbjct: 116 FKKHNQLKVHQFSHTQ--------------------QLPYECPHEGC------DKRFSLP 149

Query: 184 SFVTTHMRVHTG 195
           S +  H +VH G
Sbjct: 150 SRLKRHEKVHAG 161

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 91.9 bits (229), Expect = 5e-22
 Identities = 45/195 (23%), Positives = 64/195 (32%), Gaps = 38/195 (19%)

Query: 9   FRQVINLLKHRREHGGNLSFD-NCHICKETFYKHSELVRHLEREHNIPRSESSPWCC--R 65
           + +   L  H  +H G   F      C++ F     L RH    H    +    + C   
Sbjct: 24  YNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH-SLTH----TGEKNFTCDSD 78

Query: 66  FCNKRMMTKLSLGIHERIHTG--QRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCT 121
            C+ R  TK ++  H           Y+C +  CG  F+    L  HQ  HT Q  Y C 
Sbjct: 79  GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 138

Query: 122 --VCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKA 179
              C K FS  S +  H +VH G    K                      C F    GK 
Sbjct: 139 HEGCDKRFSLPSRLKRHEKVHAGYPCKK-------------------DDSCSFV---GKT 176

Query: 180 FSRKSFVTTHMRVHT 194
           ++   ++      H 
Sbjct: 177 WT--LYLKHVAECHQ 189

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 99.0 bits (248), Expect = 1e-25
 Identities = 28/82 (34%), Positives = 44/82 (53%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
            + C+FC +      +L IHER HT +RPY CD C   FR + +L  H+ +H+ ++ + C
Sbjct: 17  EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76

Query: 121 TVCGKAFSRKSFVTTHMRVHTG 142
             CGK F +   +  H  +H  
Sbjct: 77  QECGKGFCQSRTLAVHKTLHMQ 98

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 76.3 bits (189), Expect = 2e-17
 Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 29/96 (30%)

Query: 102 KANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFA 161
            +     +     ++++ C  CG+ F++   +  H R HT                    
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTD------------------- 42

Query: 162 VE--YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
            E  Y     C       KAF R+  +  H  +H+ 
Sbjct: 43  -ERPYT-CDIC------HKAFRRQDHLRDHRYIHSK 70

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 72.1 bits (178), Expect = 7e-16
 Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 6/108 (5%)

Query: 14  NLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMT 73
                R        F  C  C   F K   L+ H ER H    ++  P+ C  C+K    
Sbjct: 4   GSSGGRLPSKTKKEFI-CKFCGRHFTKSYNLLIH-ERTH----TDERPYTCDICHKAFRR 57

Query: 74  KLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           +  L  H  IH+ ++P+ C  CG GF     L  H+ +H         
Sbjct: 58  QDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 99.5 bits (249), Expect = 2e-25
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 32/134 (23%)

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTV--CG 124
           C K      ++  H   H G R ++C  CG  F   + L +HQ VHTG++ + CT   CG
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71

Query: 125 KAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YE-IIQECLFAKNGGKAFS 181
           K FS    + TH+R+HTG                    +  Y      C       K F+
Sbjct: 72  KRFSLDFNLRTHVRIHTG--------------------DRPYVCPFDGC------NKKFA 105

Query: 182 RKSFVTTHMRVHTG 195
           + + + +H+  H  
Sbjct: 106 QSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 81.8 bits (203), Expect = 4e-19
 Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 32/113 (28%)

Query: 88  RPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT 145
           R   C    C   FR  + + +H   H G R + C  CGKAF   S +  H  VHTG   
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG--- 59

Query: 146 GKFGQKMSALSGTAFAVE--YE-IIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
                            E  ++   + C      GK FS    + TH+R+HTG
Sbjct: 60  -----------------EKPFQCTFEGC------GKRFSLDFNLRTHVRIHTG 89

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 63.3 bits (155), Expect = 2e-12
 Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 17/117 (14%)

Query: 9   FRQVINLLKHRREHGGNLSFDNCHICKE---TFYKHSELVRHLEREHNIPRSESSPWCCR 65
           FR    + KH   HG        H+C E    F + S+L RH +  H    +   P+ C 
Sbjct: 17  FRDNSAMRKHLHTHG-----PRVHVCAECGKAFVESSKLKRH-QLVH----TGEKPFQCT 66

Query: 66  F--CNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKY 118
           F  C KR     +L  H RIHTG RPY+C +  C   F    NL  H   H   +  
Sbjct: 67  FEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 97.9 bits (245), Expect = 3e-25
 Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 24/117 (20%)

Query: 84  HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
            +G     C+ CG  FR   +L +H+  H+G++ Y+C VCG  F RK  ++ H+R H G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 144 LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHM-RVHTGKLTG 199
           +   +                 I Q C      GK FSR   +  H+ +VH+G  +G
Sbjct: 62  VGKPY-----------------ICQSC------GKGFSRPDHLNGHIKQVHSGPSSG 95

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 89.5 bits (223), Expect = 3e-22
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRK--Y 118
              C  C K       L  H+  H+G++PY C  CG+ F+ K  +  H   H G     Y
Sbjct: 7   GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66

Query: 119 NCTVCGKAFSRKSFVTTHM-RVHTGKLTG 146
            C  CGK FSR   +  H+ +VH+G  +G
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVHSGPSSG 95

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 30/109 (27%), Positives = 40/109 (36%), Gaps = 37/109 (33%)

Query: 9   FRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCN 68
           FR V +L +H+  H G                        E+          P+ C  C 
Sbjct: 17  FRDVYHLNRHKLSHSG------------------------EK----------PYSCPVCG 42

Query: 69  KRMMTKLSLGIHERIHTG--QRPYICDWCGVGFRSKANLLQH-QPVHTG 114
            R   K  +  H R H G   +PYIC  CG GF    +L  H + VH+G
Sbjct: 43  LRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =   99 bits (250), Expect = 3e-25
 Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 41/178 (23%)

Query: 31  CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKL-----SLGIHERIHT 85
              C + F    +LV H+  EH     E   + C +       +       L +H R HT
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHI--HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 86  GQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCT--VCGKAFSRKSFVTTHM-RVH 140
           G++P+ C +  C   +    NL  H   HTG++ Y C    C KAFS  S    H  R H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 141 TGKLTGKFGQKMSALSGTAFAVE--YE-IIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
           +                     E  Y   +  C       K ++  S +  H++   G
Sbjct: 124 SN--------------------EKPYVCKLPGC------TKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 40/149 (26%)

Query: 61  PWCCRFCNKRMMTKLSLGIH---ERIHTGQRPYICDWCGVGFRSKA-----NLLQHQPVH 112
                 C++   ++  L  H   E IH  ++ ++C W G     +       L+ H   H
Sbjct: 3   DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH 62

Query: 113 TGQRKYNCTV--CGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YE-II 167
           TG++ + CT   C K++SR   + TH+R HTG                    E  Y    
Sbjct: 63  TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG--------------------EKPYMCEH 102

Query: 168 QECLFAKNGGKAFSRKSFVTTHM-RVHTG 195
           + C       KAFS  S    H  R H+ 
Sbjct: 103 EGC------SKAFSNASDRAKHQNRTHSN 125

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 85.7 bits (213), Expect = 3e-20
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 19/150 (12%)

Query: 7   RGFRQVINLLKH---RREHGGNLSFD----NCHICKETFYKHSELVRHLEREHNIPRSES 59
           + F     L+ H      HG    F      C      F     LV H+ R H   +   
Sbjct: 11  QEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM-RRHTGEK--- 66

Query: 60  SPWCCRF--CNKRMMTKLSLGIHERIHTGQRPYIC--DWCGVGFRSKANLLQHQP-VHTG 114
            P  C F  C K      +L  H R HTG++PY+C  + C   F + ++  +HQ   H+ 
Sbjct: 67  -PHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125

Query: 115 QRKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
           ++ Y C +  C K ++  S +  H++   G
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 74.9 bits (185), Expect = 2e-16
 Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 37/119 (31%)

Query: 88  RPYICDWCGVGFRSKANLLQH---QPVHTGQRKYNCTVCG-----KAFSRKSFVTTHMRV 139
                D C   F S+  L+ H   + +H  ++++ C   G     + F  +  +  HMR 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 140 HTGKLTGKFGQKMSALSGTAFAVE--YE-IIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
           HTG                    E  ++   + C       K++SR   + TH+R HTG
Sbjct: 62  HTG--------------------EKPHKCTFEGC------RKSYSRLENLKTHLRSHTG 94

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 97.9 bits (245), Expect = 4e-25
 Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 32/117 (27%)

Query: 81  ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVH 140
               +G + Y C  CG  F  K+   +H  +H G R Y C VCGK F  K  +  HM++H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 141 TGKLTGKFGQKMSALSGTAFAVE--YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
           TG                       YE    C       K F  +   + H  V + 
Sbjct: 61  TG--------------------IKPYEC-NIC------AKRFMWRD--SFHRHVTSC 88

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 90.6 bits (226), Expect = 2e-22
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C K    K     H  +H G RPY C  CG  F+ K +L+ H  +HTG + Y C +C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74

Query: 127 FSRKSFVTTHMRVHTG 142
           F  +   + H  V + 
Sbjct: 75  FMWRD--SFHRHVTSC 88

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 80.2 bits (199), Expect = 1e-18
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 7/102 (6%)

Query: 34  CKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICD 93
           C ++F   S+  RH    H   R    P+ C  C K+   K  L  H +IHTG +PY C+
Sbjct: 15  CGKSFTHKSQRDRH-MSMHLGLR----PYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 94  WCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTT 135
            C   F  + +   H+ V +  + Y      +  +  S  ++
Sbjct: 70  ICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 11/97 (11%), Positives = 23/97 (23%), Gaps = 36/97 (37%)

Query: 9   FRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCN 68
           F+   +L+ H + H G   ++ C+IC + F                              
Sbjct: 47  FKMKHHLVGHMKIHTGIKPYE-CNICAKRFMWRDSF------------------------ 81

Query: 69  KRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANL 105
                      H  + +  + Y            +  
Sbjct: 82  -----------HRHVTSCTKSYEAAKAEQNTTEASGP 107

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 96.0 bits (240), Expect = 7e-25
 Identities = 30/66 (45%), Positives = 40/66 (60%)

Query: 77  LGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTH 136
                 IH+G++PY C  CG  F   + L+QHQ VHTG++ Y C  CGKAFS+ S +  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 137 MRVHTG 142
            R+HT 
Sbjct: 62  QRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 74.8 bits (185), Expect = 3e-17
 Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 29/93 (31%)

Query: 105 LLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE- 163
                 +H+G++ Y C  CGKAFSR S +  H RVHTG                    E 
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG--------------------EK 41

Query: 164 -YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
            Y+   EC      GKAFS+ S +  H R+HT 
Sbjct: 42  PYKC-LEC------GKAFSQNSGLINHQRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 62.1 bits (152), Expect = 9e-13
 Identities = 21/58 (36%), Positives = 29/58 (50%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C  C K       L  H+R+HTG++PY C  CG  F   + L+ HQ +HT     
Sbjct: 14  PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 95.6 bits (239), Expect = 1e-24
 Identities = 29/67 (43%), Positives = 39/67 (58%)

Query: 76  SLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTT 135
           S G  E     +R Y CD CG  F   ++L +H+  HTG++ Y C  CGKAF ++S +  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 136 HMRVHTG 142
           H RVHTG
Sbjct: 65  HHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 75.2 bits (186), Expect = 3e-17
 Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 29/97 (29%)

Query: 101 SKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAF 160
           S  +  + +     +R+Y C  CGK+FS  S ++ H R HTG                  
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG------------------ 43

Query: 161 AVE--YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
             E  Y+   EC      GKAF ++S +  H RVHTG
Sbjct: 44  --EKPYKC-DEC------GKAFIQRSHLIGHHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.5 bits (148), Expect = 5e-12
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 40  KHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGF 99
                 R  E +      E   + C  C K       L  H R HTG++PY CD CG  F
Sbjct: 2   SSGSSGRS-EWQQ----RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF 56

Query: 100 RSKANLLQHQPVHTGQRKY 118
             +++L+ H  VHTG    
Sbjct: 57  IQRSHLIGHHRVHTGSGPS 75

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 94.8 bits (237), Expect = 2e-24
 Identities = 27/67 (40%), Positives = 38/67 (56%)

Query: 76  SLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTT 135
               H  +    +PY CD C   FR K NL  H+ VHTG++ Y C +CG  F+R + + T
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 136 HMRVHTG 142
           H R+H+G
Sbjct: 64  HTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 74.0 bits (183), Expect = 7e-17
 Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 29/94 (30%)

Query: 104 NLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE 163
           +   H  +    + Y C  C  +F  K  + +H  VHTG                    E
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG--------------------E 43

Query: 164 --YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
             Y     C      G  F+R + + TH R+H+G
Sbjct: 44  KPYRC-NIC------GAQFNRPANLKTHTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.8 bits (146), Expect = 8e-12
 Identities = 22/58 (37%), Positives = 33/58 (56%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
           P+ C  C      K +L  H+ +HTG++PY C+ CG  F   ANL  H  +H+G++ Y
Sbjct: 17  PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 92.6 bits (231), Expect = 2e-23
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 76  SLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRK----YNCTVCGKAFSRKS 131
           S G   R HTG++PY C  C   FR K  L  H   +         + C+ CGK F+R++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 132 FVTTHMRVHTG 142
            +  H     G
Sbjct: 62  TMARHADNCAG 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 76.0 bits (188), Expect = 2e-17
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 21/92 (22%)

Query: 104 NLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE 163
           +       HTG++ Y C+ C K F +K  +  H + +       F               
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP---NFVPA-----------A 47

Query: 164 YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
           +    +C      GK F+R++ +  H     G
Sbjct: 48  FV-CSKC------GKTFTRRNTMARHADNCAG 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 69.5 bits (171), Expect = 4e-15
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTG----QRPYICDWCGVGFRSKANLLQHQPVHTGQR 116
           P+ C  C+K    K  L +H + +         ++C  CG  F  +  + +H     G  
Sbjct: 15  PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD 74

Query: 117 KYNCTVCGKAF 127
                  G + 
Sbjct: 75  GVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 54.5 bits (132), Expect = 8e-10
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 2/86 (2%)

Query: 14 NLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMT 73
          +     R H G   +  C  C +TF +   L  H  + ++ P    + + C  C K    
Sbjct: 2  SSGSSGRTHTGEKPYA-CSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAFVCSKCGKTFTR 59

Query: 74 KLSLGIHERIHTGQRPYICDWCGVGF 99
          + ++  H     G      +  G   
Sbjct: 60 RNTMARHADNCAGPDGVEGENSGPSS 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 92.1 bits (230), Expect = 3e-23
 Identities = 27/76 (35%), Positives = 40/76 (52%)

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKA 126
           C++R     SL  H RIHTGQ+P+ C  C   F    +L  H   HTG++ + C +CG+ 
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 127 FSRKSFVTTHMRVHTG 142
           F+R      H ++H  
Sbjct: 72  FARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 85.2 bits (212), Expect = 1e-20
 Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 31/112 (27%)

Query: 88  RPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT 145
           RPY C    C   F    +L +H  +HTGQ+ + C +C + FSR   +TTH+R HTG   
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG--- 59

Query: 146 GKFGQKMSALSGTAFAVE--YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
                            E  +     C      G+ F+R      H ++H  
Sbjct: 60  -----------------EKPFAC-DIC------GRKFARSDERKRHTKIHLR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 84.9 bits (211), Expect = 1e-20
 Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 64  CRFCNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCT 121
              C K       L  H R HTG++PY CDW  CG  F     L +H   HTG R + C 
Sbjct: 10  YAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ 69

Query: 122 VCGKAFSRKSFVTTHMRVH 140
            C +AFSR   +  HM+ H
Sbjct: 70  KCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 69.5 bits (171), Expect = 4e-15
 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 27/112 (24%)

Query: 84  HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHT 141
            T         CG  +   ++L  H   HTG++ Y+C    CG  F+R   +T H R HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 142 GKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVH 193
                  G +            ++  Q+C       +AFSR   +  HM+ H
Sbjct: 62  -------GHR-----------PFQ-CQKC------DRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.9 bits (128), Expect = 3e-09
 Identities = 22/87 (25%), Positives = 30/87 (34%), Gaps = 29/87 (33%)

Query: 112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YE-IIQ 168
            T     +   CGK +++ S +  H+R HTG                    E  Y     
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTG--------------------EKPYHCDWD 41

Query: 169 ECLFAKNGGKAFSRKSFVTTHMRVHTG 195
            C      G  F+R   +T H R HTG
Sbjct: 42  GC------GWKFARSDELTRHYRKHTG 62

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 84.5 bits (210), Expect = 1e-20
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 76  SLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG--QRKYNCTVCGKAFSRKSFV 133
           S G   R H+G++PY C  C   F     +  H          K++C  C    +RKS +
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 134 TTHMR-VHTG 142
             H+R  H+ 
Sbjct: 62  GVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 67.2 bits (165), Expect = 2e-14
 Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 24/93 (25%)

Query: 104 NLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE 163
           +       H+G++ Y C +C   F++   +  H+     +   KF               
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFH-------------- 47

Query: 164 YEIIQECLFAKNGGKAFSRKSFVTTHMR-VHTG 195
                 C          +RKS +  H+R  H+ 
Sbjct: 48  ---CPHC------DTVIARKSDLGVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 3/61 (4%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTG--QRPYICDWCGVGFRSKANLLQHQ-PVHTGQRK 117
           P+ C  C+ R     ++ +H           + C  C      K++L  H    H+    
Sbjct: 15  PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP 74

Query: 118 Y 118
            
Sbjct: 75  S 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 310 RPYDCDVCGAKFTQVGDMRRHRKKH 334
           +PY+C +C A+FTQ G M+ H  + 
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQK 38

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 16/61 (26%), Positives = 24/61 (39%)

Query: 82  RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHT 141
              +   P  C  C     SKA L  H+ +H   R + C  C     + S ++ HM+   
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 142 G 142
           G
Sbjct: 62  G 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 64.4 bits (158), Expect = 1e-13
 Identities = 19/61 (31%), Positives = 29/61 (47%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           P  C  C+    +K +L IHERIH   RP+ C++C    +  +NL +H     G      
Sbjct: 9   PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

Query: 121 T 121
           +
Sbjct: 69  S 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 62.1 bits (152), Expect = 9e-13
 Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 29/87 (33%)

Query: 111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YEIIQ 168
             +      C+ C  + S K+ +  H R+H                      +  ++   
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCT--------------------DRPFKC-N 41

Query: 169 ECLFAKNGGKAFSRKSFVTTHMRVHTG 195
            C           + S ++ HM+   G
Sbjct: 42  YC------SFDTKQPSNLSKHMKKFHG 62

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 84.2 bits (209), Expect = 4e-20
 Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 67  CNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTVCG 124
           C K       L  H R HTG++PY C W  C   F     L +H   HTG + + C VC 
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82

Query: 125 KAFSRKSFVTTHMRVHT 141
           ++FSR   +  HM+ H 
Sbjct: 83  RSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 66.9 bits (164), Expect = 4e-14
 Identities = 31/121 (25%), Positives = 42/121 (34%), Gaps = 31/121 (25%)

Query: 76  SLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFV 133
                 RIH    P     C   +   ++L  H   HTG++ Y CT   C   F+R   +
Sbjct: 8   PDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63

Query: 134 TTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVH 193
           T H R HTG        K        F         C       ++FSR   +  HM+ H
Sbjct: 64  TRHYRKHTG-------AK-------PFQCG-----VC------NRSFSRSDHLALHMKRH 98

Query: 194 T 194
            
Sbjct: 99  Q 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 27/97 (27%)

Query: 99  FRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGT 158
             S    L+ + +H          C K +++ S +  H+R HTG       +K       
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTG-------EK------- 44

Query: 159 AFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG 195
            +   +E    C         F+R   +T H R HTG
Sbjct: 45  PYKCTWE---GC------DWRFARSDELTRHYRKHTG 72

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 81.1 bits (201), Expect = 2e-19
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 81  ERIHTGQRPYICDWCGVGFRSKANLLQHQ--PVHTGQRKYNCTVCGKAFSRKSFVTTHMR 138
           E    G+  Y C  C   +   +N  +H         + Y C  C K F+RK  +T H++
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 139 VHTG 142
           +   
Sbjct: 62  IIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 13/84 (15%), Positives = 19/84 (22%), Gaps = 31/84 (36%)

Query: 31  CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPY 90
           C +C   +   S   RH    H                                   + Y
Sbjct: 13  CKVCSRVYTHISNFCRHYVTSH-------------------------------KRNVKVY 41

Query: 91  ICDWCGVGFRSKANLLQHQPVHTG 114
            C +C   F  K N+  H  +   
Sbjct: 42  PCPFCFKEFTRKDNMTAHVKIIHK 65

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 80.6 bits (200), Expect = 4e-19
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 4/85 (4%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           P+ CR C +       L  H R HTG++P+ CD CG  F       +H+ +         
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61

Query: 121 TVCGKAFSRKSFVTTH---MRVHTG 142
               +  S+   +      ++   G
Sbjct: 62  DKVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 79.1 bits (196), Expect = 1e-18
 Identities = 17/111 (15%), Positives = 33/111 (29%), Gaps = 29/111 (26%)

Query: 88  RPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGK 147
           +P+ C  C   F    +L  H   HTG++ + C +CG+ F+R      H  +        
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL---- 57

Query: 148 FGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTH---MRVHTG 195
                                +        +  S+   +      ++   G
Sbjct: 58  ---------------PIL-EDKV------EELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 59.4 bits (145), Expect = 1e-11
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 29/81 (35%)

Query: 118 YNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YEIIQECLFAKN 175
           + C +C + FSR   +TTH+R HTG                    E  +     C     
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG--------------------EKPFAC-DIC----- 37

Query: 176 GGKAFSRKSFVTTHMRVHTGK 196
            G+ F+R      H  +    
Sbjct: 38  -GRKFARSDERKRHRDIQHIL 57

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 76.7 bits (189), Expect = 8e-18
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 84  HTGQRPYICDWCGVGFRSKANLLQHQPVHT---GQRKYNCTVCGKAFSRKSFVTTHMRVH 140
            +G     C+ CG   R KA+L  HQ  H       ++ C  CGK F +   V  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 141 TGKLTGKFGQKMSALSG 157
              L     +     SG
Sbjct: 62  HPALLLAPQESSGPSSG 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 59.3 bits (144), Expect = 1e-11
 Identities = 19/99 (19%), Positives = 27/99 (27%), Gaps = 22/99 (22%)

Query: 112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECL 171
            +G     C +CG    +K+ +  H R H   +               F  E      C 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAAL-----------RFPCE-----FC- 44

Query: 172 FAKNGGKAFSRKSFVTTHMRVHTGKLTGKFGQKISALSG 210
                GK F +   V  H       L     +     SG
Sbjct: 45  -----GKRFEKPDSVAAHRSKSHPALLLAPQESSGPSSG 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.2 bits (128), Expect = 2e-09
 Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 3/71 (4%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHT---GQRPYICDWCGVGFRSKANLLQHQPVHTGQRK 117
              C  C      K SL  H+R H        + C++CG  F    ++  H+        
Sbjct: 7   GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 118 YNCTVCGKAFS 128
                     S
Sbjct: 67  LAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 7e-05
 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 31 CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERI-HTGQRP 89
          C IC  T  + + L  H  R+H    +    + C FC KR     S+  H    H     
Sbjct: 10 CEICGFTCRQKASLNWHQ-RKHAETVAAL-RFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 90 YICDWCG 96
             +  G
Sbjct: 68 APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 310 RPYDCDVCGAKFTQVGDMRRHRKKHDENGG 339
               C++CG    Q   +  H++KH E   
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVA 35

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 75.7 bits (187), Expect = 2e-17
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 84  HTGQRPYICDW--CGVGFRSKANLLQHQ-PVHTGQRKYNCT--VCGKAFSRKSFVTTHMR 138
            +G     CD+  CG  F ++  L  H+   H  Q+ ++C    CGK+F+ K  +  HM+
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 139 VHTG 142
           +H+ 
Sbjct: 62  LHSD 65

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 72.2 bits (178), Expect = 3e-16
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 5/72 (6%)

Query: 61  PWCCRF--CNKRMMTKLSLGIHERI-HTGQRPYICD--WCGVGFRSKANLLQHQPVHTGQ 115
              C F  C +    +  L  H++  H  Q+ + C    CG  F  K +L +H  +H+  
Sbjct: 7   GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT 66

Query: 116 RKYNCTVCGKAF 127
           R Y C   G + 
Sbjct: 67  RDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 26/87 (29%)

Query: 112 HTGQRKYNCTV--CGKAFSRKSFVTTHMRV-HTGKLTGKFGQKMSALSGTAFAVEYEIIQ 168
            +G     C    CG+ FS + ++  H +  H                        +   
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH----------------------QKSF 39

Query: 169 ECLFAKNGGKAFSRKSFVTTHMRVHTG 195
            C      GK+F+ K  +  HM++H+ 
Sbjct: 40  SCPE-PACGKSFNFKKHLKEHMKLHSD 65

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 72.9 bits (180), Expect = 1e-16
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 88  RPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHM-RVHTG 142
           R ++C+ C   F  + +L +H   HT ++ Y C +C +AF+R+  +  H  ++H+G
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 54.4 bits (132), Expect = 4e-10
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQH-QPVHTG 114
            + C  C +    +  L  H R HT ++PY C  C   F  +  L++H Q +H+G
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 73.0 bits (180), Expect = 2e-16
 Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 4/79 (5%)

Query: 64  CRF--CNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYN 119
           C F  C K       L +H+  HT Q PY C    C   F   + L +H+ VH G     
Sbjct: 4   CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 63

Query: 120 CTVCGKAFSRKSFVTTHMR 138
              C       +    H+ 
Sbjct: 64  DDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 22/83 (26%), Positives = 28/83 (33%), Gaps = 31/83 (37%)

Query: 118 YNCTV--CGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE--YEIIQE-CLF 172
           Y C    CGKAF + + +  H   HT                     +  YE   E C  
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQ--------------------QLPYECPHEGC-- 39

Query: 173 AKNGGKAFSRKSFVTTHMRVHTG 195
                K FS  S +  H +VH G
Sbjct: 40  ----DKRFSLPSRLKRHEKVHAG 58

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 68.5 bits (168), Expect = 6e-15
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 80  HERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHM 137
              +    RPY C    C   F     L +H  +HTGQ+ + C +C + FSR   +TTH+
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

Query: 138 RVHT 141
           R HT
Sbjct: 70  RTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 27/89 (30%)

Query: 108 HQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYE 165
              V    R Y C V  C + FSR   +T H+R+HTG       QK        F     
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG-------QKP-------FQCR-- 53

Query: 166 IIQECLFAKNGGKAFSRKSFVTTHMRVHT 194
               C       + FSR   +TTH+R HT
Sbjct: 54  ---IC------MRNFSRSDHLTTHIRTHT 73

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 67.6 bits (166), Expect = 7e-15
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQH-QPVHTGQRKYNCTVCGKAFS 128
           G      +  +PYIC  CG GF    +L  H + VHT +R + C V     S
Sbjct: 1   GSSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 50.7 bits (122), Expect = 8e-09
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHM-RVHTG 142
                +  + Y C  CGK FSR   +  H+ +VHT 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS 38

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 61  PWCCRFCNKRMMTKLSLGIHE-RIHTGQRPYICDWCGVGFRS 101
           P+ C+ C K       L  H  ++HT +RP+ C     G  S
Sbjct: 12  PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 20/44 (45%), Positives = 26/44 (59%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG G+ SK NL  HQ VHTG+R    +
Sbjct: 1   GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGK ++ K  +  H +VHTG
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K   +K +L +H+++HTG+RP   
Sbjct: 12 PYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 65.3 bits (160), Expect = 4e-14
 Identities = 18/44 (40%), Positives = 26/44 (59%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TGQ+P+ C  CG  FR+K NL+ HQ +HTG++    +
Sbjct: 1   GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 56.4 bits (137), Expect = 6e-11
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TGQ+ + CT CGK+F  K  + TH R+HTG
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    K +L  H+RIHTG++    
Sbjct: 12 PFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG+ P+IC  CG  F  K NL+ HQ +HTG+R    +
Sbjct: 1   GSSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG+  + C+ CGK F+ K+ +  H ++HTG
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    K +L IH++IHTG+RP   
Sbjct: 12 PFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      + ++PY C+ CG G+  + NL  HQ VH G++    +
Sbjct: 1   GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 + ++ Y C  CGK ++R+  +  H RVH G
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    +L+L +H+R+H G++    
Sbjct: 12 PYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 63.5 bits (154), Expect = 4e-13
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 7/70 (10%)

Query: 76  SLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTT 135
           S G  ++IH G R   C  CG+ F  ++ L + +          C  C K   +++ +  
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT-------PMCEKCRKDSCQEAALNK 57

Query: 136 HMRVHTGKLT 145
                +GK T
Sbjct: 58  DEGNESGKKT 67

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 44.3 bits (104), Expect = 2e-06
 Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 32/98 (32%)

Query: 101 SKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAF 160
           S  +  + Q +H G R   C+ CG  F R+S ++                          
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR------------------------ 37

Query: 161 AVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLT 198
             +  + ++C       K   +++ +       +GK T
Sbjct: 38  --KTPMCEKC------RKDSCQEAALNKDEGNESGKKT 67

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 4e-13
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG +PY C+ CG  F   + L +HQ VHTG++    +
Sbjct: 1   GSSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG + Y C  CGKAFS+ S +  H RVHTG
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 4e-13
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PYIC  CG  F  ++NL++HQ +HT Q+    +
Sbjct: 1   GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGKAF+ +S +  H ++HT 
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      +G++PY C  CG G++ + +L  HQ VHTG++    +
Sbjct: 1   GSSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                +G++ Y C  CGK + R+  +  H RVHTG
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICD 93
          P+ C  C K    +L L  H+R+HTG++     
Sbjct: 12 PYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 6e-13
 Identities = 18/43 (41%), Positives = 26/43 (60%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           G      TG+RPYIC  CG  F  ++NL++HQ +HTG++    
Sbjct: 1   GSSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG+R Y CTVCGKAF+ +S +  H ++HTG
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 6e-13
 Identities = 16/44 (36%), Positives = 27/44 (61%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      +G++PY+CD+CG  F   A L++HQ +HTG++    +
Sbjct: 1   GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 +G++ Y C  CGKAF   + +  H R+HTG
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.7 bits (151), Expect = 7e-13
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++P+ CD CG  F  ++ L +H  VHT ++    +
Sbjct: 1   GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.3 bits (137), Expect = 5e-11
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ + C +CGK+F  +S +  H  VHT 
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 7e-13
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      +G++PY C+ CG  F  K+ L  HQ  HTG++    +
Sbjct: 1   GSSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                +G++ Y C  CGK FS+KS ++ H R HTG
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    K  L  H+R HTG++P   
Sbjct: 12 PYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 8e-13
 Identities = 19/44 (43%), Positives = 25/44 (56%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C  CG  F  KANL QHQ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C  CGKAF++K+ +T H R+HTG
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    K +L  H+RIHTG++P   
Sbjct: 12 PYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 8e-13
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G       G++ Y CD CG  F   ++L  HQ VHTG++    +
Sbjct: 1   GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 7e-11
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 G++ Y C VCGK FS+ S + TH RVHTG
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 8e-13
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C  CG  F  K+ L  HQ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 6e-11
 Identities = 14/36 (38%), Positives = 24/36 (66%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C++CGK+F++KS +  H ++HTG
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    K  L +H++IHTG++P   
Sbjct: 12 PYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 61.4 bits (150), Expect = 9e-13
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C  CG  FR  + LL+HQ VH+G++    +
Sbjct: 1   GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ YNC  CGK+F   S +  H RVH+G
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C+ C K       L  H+R+H+G++P   
Sbjct: 12 PYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 9e-13
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY CD C   FR  ++L  HQ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C VC K+F   S +T H R+HTG
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C+K      SL +H+RIHTG++P   
Sbjct: 12 PYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.3 bits (150), Expect = 1e-12
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           G      TG++PY C+ C   F +K+NL+ HQ  HTG+   + 
Sbjct: 1   GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  C KAF+ KS +  H R HTG
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K   TK +L +H+R HTG+     
Sbjct: 12 PYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY CD C   F   A+L QHQ VH+G++    +
Sbjct: 1   GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C VC KAFS  + +T H RVH+G
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           G      TG++PY C  CG  F  K+ L  HQ +HTG+     
Sbjct: 1   GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C+ CGK+F +KS +  H R+HTG
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K  + K  L +H+RIHTG+ P   
Sbjct: 12 PYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCG 124
           G      +G++P+ C+ CG GF + +    HQ  H+G++    +  G
Sbjct: 1   GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 +G++ + C  CGK F   S   +H R H+G
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCG 96
          P+ C  C K   T      H+R H+G++P      G
Sbjct: 12 PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG+R Y C  CG  F  K+ L  HQ +H G++    +
Sbjct: 1   GSSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 4e-11
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG+R Y C+ CGKAF +KS ++ H R+H G
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
           + C  C K  + K +L +H+RIH G++P   
Sbjct: 12 HYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                TG++PY C  CG  FR  ++L+QH  VH+G+R    +
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C VCGKAF   S +  H  VH+G
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG+R Y C  CG  F  K+ L+ HQ +HTG++    +
Sbjct: 1   GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 7e-12
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG+R Y C+ CGKAF+RKS +  H R+HTG
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
           + C  C K    K +L +H+RIHTG++P   
Sbjct: 12 HYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++P+ C  C   F +K+NL+ HQ  HTG++    +
Sbjct: 1   GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 4e-10
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ + C+ C KAF+ KS +  H R HTG
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K   TK +L +H+R HTG++P   
Sbjct: 12 PFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TGQRPY C  CG  F++K++L+ H+  HTG++    +
Sbjct: 1   GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 18/36 (50%), Positives = 19/36 (52%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TGQR Y C  CGKAF  KS +  H R HTG
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K   TK SL  H R HTG++P   
Sbjct: 12 PYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  FR+ +NL  HQ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C  CGKAF   S +TTH  +HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           G      TG++PY C  CG  F  ++NL  HQ +HTG++    
Sbjct: 1   GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C  CGKAF+ +S + TH ++HTG
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    + +L  H++IHTG++P   
Sbjct: 12 PYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++P+ C  CG  F   + L  HQ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ + C  CGK+FS  S + TH R+HTG
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K       L  H+RIHTG++P   
Sbjct: 12 PFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C  CG  F  + +L  HQ +H+G++    +
Sbjct: 1   GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C+VCGKAFS +  ++ H R+H+G
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    + SL +H+RIH+G++P   
Sbjct: 12 PYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                TG+RP+ C+ CG  F   A+L+QHQ +HTG++    +
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG+R + C  CGK+F + + +  H R+HTG
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                TG++P+ C  CG  F     L QH+ +HTG++    +
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ ++C  CGKAFS    +  H R+HTG
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K     + L  H RIHTG++P   
Sbjct: 12 PFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG GF  + +L  H  VHTG++    +
Sbjct: 1   GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGK F  +  + TH  VHTG
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K  + +  L  H  +HTG++P   
Sbjct: 12 PYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G       G++PY C  CG  F SK+ L+ H   H+G++    +
Sbjct: 1   GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                  G++ Y C+ CGKAFS KS++  HMR H+G
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K   +K  L IH R H+G++P   
Sbjct: 12 PYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                TG++PY C+ CG  F   A+L QH  VHT +     +
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y+C VCGKAF   + +  H+RVHT 
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  FR  + L +HQ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 4e-11
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C  CGK F   S+++ H R+HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G       G+R + C  CG  F   +N +QH+ +HTG++    +
Sbjct: 1   GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 6e-11
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                  G+R + C+ CGK F + S    H R+HTG
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  FR++++L  HQ  H+G++    +
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C  CGKAF  +S +  H   H+G
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    + SL IH+  H+G++P   
Sbjct: 12 PYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 15/44 (34%), Positives = 20/44 (45%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG+ PY C  CG  F  K  L+ HQ  H G++    +
Sbjct: 1   GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG+  Y C  CGKAFSRK  + +H R H G
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  F   ++L  HQ +HTG +    +
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGK F++ S +  H R+HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           G      TG +PY+C+ CG  FRSK+ L+ H   HTG+   + 
Sbjct: 1   GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG + Y C  CGKAF  KS++  H R HTG
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K   +K  L IH R HTG+     
Sbjct: 12 PYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C  CG  F   ++  QHQ +HTGQR    +
Sbjct: 1   GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGKAF   S  T H R+HTG
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG 37

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K      S   H+R+HTGQRP   
Sbjct: 12 PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                TG + + C  CG  F  K+ L  HQ +HTG++    +
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG + + CT CGKAF+RKS ++ H ++HTG
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
           + C  C K    K +L +H++IHTG++P   
Sbjct: 12 HFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++P+ C  CG  F   + L+ HQ +HTG+     +
Sbjct: 1   GSSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ + C  CGK+FS  S +  H R+HTG
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 59.9 bits (146), Expect = 4e-12
 Identities = 15/44 (34%), Positives = 20/44 (45%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG +PY C  C   F  K+ L+ HQ  HTG +    +
Sbjct: 1   GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG + Y C+ C K FS KS +  H R HTG
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    K  L +H+R HTG +P   
Sbjct: 12 PYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 4e-12
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  F   + L +HQ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGKAFS+ S +  H R+HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 4e-12
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  F  +++L  HQ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C  CGKAFS +S +TTH  +HTG
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    + SL  H+ IHTG++P   
Sbjct: 12 PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 4e-12
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      +G+RPY C+ CG  F   ++L++H   H  ++    +
Sbjct: 1   GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 +G+R Y C  CGK F R S +  H++ H  
Sbjct: 2   SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR 37

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 4e-12
 Identities = 16/44 (36%), Positives = 27/44 (61%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PYIC+ CG  F  K++L +H+ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C  CGK+F +KS +  H R+HTG
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 4e-12
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                TG++P+ C  CG  +  + +L QHQ VHTG++    +
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ + C  CGK+++++  +T H RVHTG
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  F   + L +HQ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ YNC  CGKAF   S +  H R+HTG
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 4e-12
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C  CG  F  K+ L  HQ  HTG+R    +
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 8e-11
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C+ CGKAF+RKS +  H + HTG
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    K  L IH++ HTG+R    
Sbjct: 12 PYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C  C   F  KA+L QHQ  HTG++    +
Sbjct: 1   GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C VC KAF++K+ +  H + HTG
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C  CG  F  K+ L  HQ  HTG+R    +
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 5e-10
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C+ CGK+F+ KS +  H + HTG
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    K  L IH++ HTG+R    
Sbjct: 12 PYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                TG++PY C  CG  F    +L+QHQ VHTG++    +
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 56.0 bits (136), Expect = 8e-11
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C  CGKAFS+ + +  H RVHTG
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++ Y C  CG  F     LL+H+ +H+G++    +
Sbjct: 1   GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 6e-11
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ YNC  CGK+FSR   +  H R+H+G
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
                TG +PY+C+ CG  F   ++L  HQ +HTG++    
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 4e-11
 Identities = 17/36 (47%), Positives = 20/36 (55%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG + Y C  CGKAFS  S +TTH  +HTG
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++P+ C  CG GF  ++ L  H  +HTG++    +
Sbjct: 1   GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ + C  CGK FSR+S +  H ++HTG
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.0 bits (84), Expect = 9e-04
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    + +L +H ++HTG++P   
Sbjct: 12 PFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                TG++ Y C+ CG  F   + L QHQ +HTG++    +
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG+++Y C  CGK FSR S ++ H ++HTG
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 9e-12
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                +G++PY C+ CG  F   ++L  H  +HTG++    +
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 3e-10
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                +G++ Y C  CGK F++ S +T H R+HTG
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G       G++PY C  CG  F     L QH   HT ++    +
Sbjct: 1   GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                  G++ Y C+ CGK+FS    +T H   HT 
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.6 bits (143), Expect = 1e-11
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  F   ++L++H+ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 6e-10
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGK F++ S +  H  +HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++P  C  CG  F  K+ L+ HQ  H   +    +
Sbjct: 1   GSSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++   CT CGKAF  KS +  H R H  
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD 37

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 9/32 (28%), Positives = 12/32 (37%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P  C  C K    K  L +H+R H   +    
Sbjct: 12 PCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  F   ++L +H+ +HTG++    +
Sbjct: 1   GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 7e-10
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGK F++ S +  H  +HTG
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      +G++P+ C+ CG  F   ++L  HQ VHTG++    +
Sbjct: 1   GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 +G++ + C  CGK F++ S + +H RVHTG
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G       G++ + C+ C   F   ++L  HQ +HTG++    +
Sbjct: 1   GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 G++ + C  C K F++ S +T H R+HTG
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
           + C  C K      SL +H+RIHTG++P   
Sbjct: 12 LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                +G++P+ C  CG  FR   +L  H  +HTG++    +
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 +G++ + C  CGKAF +   + +H+R+HTG
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      +G++P+ C+ CG  F   + L  HQ VHTG++    +
Sbjct: 1   GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                +G++ + C  CGK F++ S + +H RVHTG
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                +G++PY C  CG  F    +L +H+ +HTG R    +
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 +G++ Y C+ CGKAF R + +  H R+HTG
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G       G  PY C  C   F  K  LL HQ +HT ++    +
Sbjct: 1   GSSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 5e-10
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 G   Y C+ C K+FS K  +  H R+HT 
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR 37

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    KL L +H+R+HT ++P   
Sbjct: 12 PYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
                TG++PY C  CG  FR  ++L +HQ +HTG++    +
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.9 bits (136), Expect = 9e-11
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ Y C  CGK F R S +  H  +HTG
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
                 T  + YNC  CGKAF+R   +T H ++HT K
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRK 38

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
                T  + Y C+ CG  F    +L +HQ +HT +   + 
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      +  + + C  CG GF  K++L QHQ +HTG++    +
Sbjct: 1   GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 +  + + C  CG+ F+ KS +  H R+HTG
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG+  Y C  CGK FSRK  + +H + H+G
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           G      TG+ PY C  CG  F  K  L+ HQ  H+GQ   + 
Sbjct: 1   GSSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.9 bits (84), Expect = 9e-04
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 177 GKAFSRKSFVTTHMRVHTG 195
           GK FSRK  + +H + H+G
Sbjct: 19  GKVFSRKDQLVSHQKTHSG 37

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  F   ++L +H+ VHTG +    +
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGK F++ S +  H RVHTG
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++PY C+ CG  F   ++L +H+ +HTG++    +
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 7e-10
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG++ Y C  CGK F++ S +  H  +HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           G      +G++PY C  C   F    +L QH+ VHTG+R    
Sbjct: 1   GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 6e-10
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                +G++ Y C  C K F +   +  H RVHTG
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG 37

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 58.2 bits (141), Expect = 3e-11
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 76  SLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKS 131
                +   +  R +IC    CG  +   ++L  H   HTG++ ++C+   C + F+R  
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 132 FVTTHMRVH 140
            ++ H R H
Sbjct: 64  ELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 25/88 (28%)

Query: 108 HQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYE 165
            Q   +  R + C+   CGK + + S +  H R HTG       +K        F+  ++
Sbjct: 8   PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG-------EK-------PFSCSWK 53

Query: 166 IIQECLFAKNGGKAFSRKSFVTTHMRVH 193
               C       + F+R   ++ H R H
Sbjct: 54  ---GC------ERRFARSDELSRHRRTH 72

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      +G+RP+ C+ CG GF  +++L  H  +H+ ++    +
Sbjct: 1   GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 6e-11
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                +G+R + C  CGK F R+S +  H+R+H+ 
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           G      +G++PY C+ CG  F  K+ L+ H+  H G    + 
Sbjct: 1   GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                +G++ Y C  CGKAF  KS +  H R H G
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      +G++ + CD CG  F   + L  HQ VH G++    +
Sbjct: 1   GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG-KLTG 146
                +G++ + C  CGK F   S +  H RVH G K +G
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSG 42

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 56.8 bits (138), Expect = 4e-11
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQ-PVHTGQRKYNCT 121
           G      TG++PY C  CG  F    +L++H    HTG++    +
Sbjct: 1   GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMR-VHTG 142
                 TG++ Y C  CGKAF + + +  H R  HTG
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG 38

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYN 119
                 G++PY CD CG  F  K +L+ H  VHTG    +
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 G++ Y C  CGKAFS+K  +  H+RVHTG
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 58.1 bits (140), Expect = 5e-11
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 9/69 (13%)

Query: 83  IHTGQRPYICDWCGVGFRSKANLLQH-QPVHTGQRKY--------NCTVCGKAFSRKSFV 133
           I   Q       C   F +   L+ H    H G  +          C   GK+F  K  +
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 134 TTHMRVHTG 142
             H+RVHTG
Sbjct: 79  VNHIRVHTG 87

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 52.7 bits (126), Expect = 4e-09
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 31 CHICKETFYKHSELVRHLEREHNIPRSESSPWC----CRFCNKRMMTKLSLGIHERIHTG 86
             C  TF    ELV H+  EH     +++  C    C    K    K  L  H R+HTG
Sbjct: 28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87

Query: 87 QRPYIC 92
          ++    
Sbjct: 88 EKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 49.6 bits (118), Expect = 6e-08
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 9/74 (12%)

Query: 57  SESSPWCCRFCNKRMMTKLSLGIH-ERIHTGQRP---YICDW-----CGVGFRSKANLLQ 107
                   + C++   T   L  H    H G      ++C W      G  F++K  L+ 
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 108 HQPVHTGQRKYNCT 121
           H  VHTG++    +
Sbjct: 81  HIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 43.8 bits (103), Expect = 5e-06
 Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 20/87 (22%)

Query: 111 VHTGQRKYNCTVCGKAFSRKSFVTTHM-RVHTGKLTGKFGQKMSALSGTAFAVEYEII-Q 168
           +   Q       C + FS    + TH+   H G                     +    +
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQN---------------NHVCYWE 63

Query: 169 ECLFAKNGGKAFSRKSFVTTHMRVHTG 195
           EC      GK+F  K  +  H+RVHTG
Sbjct: 64  EC---PREGKSFKAKYKLVNHIRVHTG 87

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 56.0 bits (136), Expect = 8e-11
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G       G++ + C  C + F   ++L  HQ VH G++    +
Sbjct: 1   GSSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 G++ + C  C   FS+ S +  H  VH G
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
           W CR C+       SL +H+ +H G++P   
Sbjct: 12 TWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 G++ Y C +CG  F     + +H+R+HTG
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
                 G++PY C+ CG  FR    L  H  +HTG    
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 35.9 bits (84), Expect = 9e-04
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPY 90
          P+ C  C  R     +L  H RIHTG  P 
Sbjct: 11 PYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 81  ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
               +G+ PY C  CG  F  K  L+ HQ  H G+   + 
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 109 QPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
               +G+  Y C+ CGKAF+RK  + +H R H G
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAG 35

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K    K  L  H+R H G+     
Sbjct: 10 PYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 78  GIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCT 121
           G      TG++P+ C W  CG  F     L +H+  H+G +    +
Sbjct: 1   GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.8 bits (109), Expect = 3e-07
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 108 HQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
                TG++ + CT   CG  FSR   ++ H R H+G
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG 39

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 G++ Y C  CG  F + + +  H+ +HTG
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYN 119
                 G++PY C+ CG  F   A+L  H  +HTG    +
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
           G      TG++P+ C  CG+ F    +L +H   H        
Sbjct: 1   GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.4 bits (129), Expect = 6e-10
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 TG++ + C  CG  FS    +  H+R H  
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 53.3 bits (129), Expect = 7e-10
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 81  ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT 121
               +G++P+ C  C   F SK+ LL HQ  H  ++    +
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
             +G++ + C+ C KAFS KS++  H + H  
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE 35

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC 92
          P+ C  C K   +K  L +H++ H  ++P   
Sbjct: 10 PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 53.2 bits (127), Expect = 1e-09
 Identities = 19/53 (35%), Positives = 28/53 (52%)

Query: 90  YICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
           YIC+ CG+  +  + L +H   HT  R Y+CT C  +F  K  +T HM+    
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 52.4 bits (125), Expect = 2e-09
 Identities = 19/54 (35%), Positives = 24/54 (44%)

Query: 64  CRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRK 117
           C  C  R      L  H R HT  RPY C +C   F++K NL +H       +K
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 16/79 (20%), Positives = 22/79 (27%), Gaps = 25/79 (31%)

Query: 117 KYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNG 176
           KY C  CG    + S +  H+R HT                            C      
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYH-------------------CTYC------ 35

Query: 177 GKAFSRKSFVTTHMRVHTG 195
             +F  K  +T HM+    
Sbjct: 36  NFSFKTKGNLTKHMKSKAH 54

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 54.4 bits (130), Expect = 1e-09
 Identities = 15/96 (15%), Positives = 26/96 (27%), Gaps = 33/96 (34%)

Query: 76  SLGIHERIHTGQRPYICDWCGVGFRSKAN------------------------------- 104
           S  ++  I TG   + C  C   + +                                  
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 105 --LLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMR 138
             LL+ +     Q+   C  CG +F     ++ HM 
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 54.4 bits (130), Expect = 2e-09
 Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 1/95 (1%)

Query: 14  NLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMT 73
           +   +     G   F  C  C   +    EL  H+    +                    
Sbjct: 6   SGKLYGSIFTGASKFR-CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 74  KLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQH 108
           K SL   E     Q+   C +CG  F S  +L  H
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 46.7 bits (110), Expect = 9e-07
 Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 8/99 (8%)

Query: 101 SKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRV--HTGKLTGKFGQKMSALSGT 158
           S ++   +  + TG  K+ C  C  A+     +T HM    H      +           
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 159 AF------AVEYEIIQECLFAKNGGKAFSRKSFVTTHMR 191
                       E  Q+ L     G +F     ++ HM 
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 53.4 bits (127), Expect = 3e-09
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 50  REHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQ 109
                P      + CR CN ++ + L  G HER+   +   +C +C + F S     +H+
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE 62

Query: 110 PVHTGQRKYNCTVCGKAFSRKSFVTTH-MRVHT 141
                 +K  C  C + F     +  H + VH 
Sbjct: 63  -SKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 8/79 (10%)

Query: 31  CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPY 90
           C +C        E   H     N          C +C+ R  +      HE      +  
Sbjct: 19  CRLCNAKLSSLLEQGSHERLCRNAAV-------CPYCSLRFFSPELKQEHES-KCEYKKL 70

Query: 91  ICDWCGVGFRSKANLLQHQ 109
            C  C   F+S  ++ +HQ
Sbjct: 71  TCLECMRTFKSSFSIWRHQ 89

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 81  ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYN 119
               +GQR Y C  CG  FR K +L  H+ +HTG    +
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 16/31 (51%), Positives = 21/31 (67%)

Query: 112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
            +GQR Y C  CGK+F +K  +T H R+HTG
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTG 35

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 49.6 bits (119), Expect = 1e-08
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                 G+  Y C  CGK+F+++  +  H R  + 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 10/39 (25%), Positives = 15/39 (38%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
                 G+ PY+C  CG  F  + +L  HQ   +     
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 82  RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC 120
              +G++PY C  C   F     L+QHQ +HT +   + 
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
            +G++ Y+C  C + FS  + +  H ++HT K
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTVK 36

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
                  G+  + C+ C + F++++++  H R H  K
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARK 38

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.5 bits (105), Expect = 8e-07
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQR 116
           G       G+ P+ C  C   F  +  L+QH+  H  + 
Sbjct: 1   GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS 39

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVH 140
                TG + + C  C ++FSR   +  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 47.6 bits (112), Expect = 5e-07
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 31  CHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPY 90
            H+  E   ++ +L    +R   + R+          N +++ + S             +
Sbjct: 22  IHVTLEELKRYHQLTPEQKR---LIRAIVKTLIH---NPQLLDESSYLYRLLASKAISQF 75

Query: 91  ICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMR 138
           +C  C + F S  +L QH           C VC K F+       H+ 
Sbjct: 76  VCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVC 121

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.9 bits (106), Expect = 7e-07
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC 123
           G        ++   C+ CG  FR   +L +H+  H+G++ Y+    
Sbjct: 1   GSSGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
              +++  C +CGK F     +  H   H+G
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKLSHSG 37

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.8 bits (85), Expect = 4e-04
 Identities = 9/40 (22%), Positives = 13/40 (32%)

Query: 56 RSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC 95
                  C  C K       L  H+  H+G++PY     
Sbjct: 7  GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 44.1 bits (103), Expect = 8e-05
 Identities = 7/39 (17%), Positives = 10/39 (25%)

Query: 110 PVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKF 148
           P  +    Y C VC         +  H+  H        
Sbjct: 173 PTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTL 211

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1 Length = 35

 Score = 36.7 bits (84), Expect = 4e-04
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT 145
            +G+R + C +C  AF+ K+    H++VHT  L+
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 35

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1 Length = 35

 Score = 36.3 bits (83), Expect = 6e-04
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 84  HTGQRPYICDWCGVGFRSKANLLQHQPVHT 113
            +G+RP++C  C   F +KAN  +H  VHT
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHT 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	434
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.74
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.7
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.69
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.69
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.68
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.68
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.65
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.64
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.61
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.61
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.6
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.54
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.53
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.52
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.49
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.47
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.46
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.44
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.44
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.43
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.41
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.4
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.4
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.4
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.37
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.37
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.36
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.35
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.35
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.35
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.35
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.34
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.34
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.34
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.3
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.3
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.29
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.29
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.29
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.27
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.25
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.25
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.24
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.18
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.14
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.13
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.11
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.1
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.08
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.99
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.99
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.98
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.98
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.97
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.97
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.96
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.96
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.94
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.94
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.92
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.92
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.9
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.9
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.87
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.87
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.86
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.85
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.85
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.85
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.85
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.84
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.84
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.83
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.83
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.82
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.81
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.8
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.8
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.79
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.79
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.78
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.78
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.76
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.76
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.74
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.74
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.72
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.71
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.69
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.69
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.68
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.68
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.66
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.65
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.65
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.64
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.63
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.59
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.58
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.55
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.53
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.5
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.49
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.46
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.46
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.46
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.44
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.37
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.34
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.34
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.33
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.33
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.32
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.32
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.32
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.31
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.3
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.29
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.28
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.27
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.27
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.26
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.25
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.25
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.25
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.24
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.57
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.56
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.49
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.16
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.13
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.12
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.09
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.02
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.98
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.98
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.97
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.97
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.94
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.93
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.93
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.91
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.88
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.88
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.87
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.85
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.06
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.83
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.82
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.81
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.79
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.73
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.87
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.53
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.09
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.95
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.43
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.11
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.76
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.38
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.43
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.15
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.92
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.32
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.63
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.23
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.12
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	81.56
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.34
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.88

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=6.1e-35  Score=256.51  Aligned_cols=153  Identities=38%  Similarity=0.751  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCCCcee
Q psy8251          12 VINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYI   91 (434)
Q Consensus        12 ~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   91 (434)
                      ...|..|++.|.++++|. |++|++.|.+...|..|++ .|    .++++|.|+.|++.|.+...|..|+++|.++++|.
T Consensus         6 ~~~l~~h~~~~~~~~~~~-C~~C~~~f~~~~~l~~H~~-~h----~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   79 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYA-CPECGKSFSRSDHLAEHQR-TH----TGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK   79 (190)
T ss_dssp             --------------------------CCSSHHHHHGGG-CC-------CCEECTTTCCEESSHHHHHHHHHHHHCCCCEE
T ss_pred             hccchhhhhhcCCCCCCc-CCCCccccCCHHHHHHHHH-Hc----CCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCcc
Confidence            467889999999999999 9999999999999999998 45    56789999999999999999999999999999999


Q ss_pred             ccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhhhce
Q psy8251          92 CDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECL  171 (434)
Q Consensus        92 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~  171 (434)
                      |++|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|+++|+++++                  |. |+.| 
T Consensus        80 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------------~~-C~~C-  139 (190)
T 2i13_A           80 CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP------------------YK-CPEC-  139 (190)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCC------------------EE-CTTT-
T ss_pred             CcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCC------------------eE-CCCC-
Confidence            999999999999999999999999999999999999999999999999999988                  55 6666 


Q ss_pred             ecccCCcccCChhhHHHHhhhccC
Q psy8251         172 FAKNGGKAFSRKSFVTTHMRVHTG  195 (434)
Q Consensus       172 ~C~~C~~~F~~~~~L~~H~~~H~~  195 (434)
                           ++.|.+...|..|+++|++
T Consensus       140 -----~~~f~~~~~L~~H~~~H~~  158 (190)
T 2i13_A          140 -----GKSFSREDNLHTHQRTHTG  158 (190)
T ss_dssp             -----CCEESCHHHHHHHHHHHHC
T ss_pred             -----CcccCCHHHHHHHHHhcCC
Confidence                 9999999999999987654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=7.2e-34  Score=249.68  Aligned_cols=168  Identities=39%  Similarity=0.766  Sum_probs=144.5

Q ss_pred             CCCccccccCCHHHHHHHHHHcCCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHH
Q psy8251           1 MWPRGFRGFRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIH   80 (434)
Q Consensus         1 ~C~~C~~~F~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H   80 (434)
                      .|++|++.|.+...|..|++.|.++++|. |+.|++.|.+...|..|++.+     .++++|.|+.|++.|.+...|..|
T Consensus        23 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-C~~C~~~f~~~~~l~~H~~~h-----~~~~~~~C~~C~~~f~~~~~l~~H   96 (190)
T 2i13_A           23 ACPECGKSFSRSDHLAEHQRTHTGEKPYK-CPECGKSFSDKKDLTRHQRTH-----TGEKPYKCPECGKSFSQRANLRAH   96 (190)
T ss_dssp             --------CCSSHHHHHGGGCC---CCEE-CTTTCCEESSHHHHHHHHHHH-----HCCCCEECTTTCCEESCHHHHHHH
T ss_pred             cCCCCccccCCHHHHHHHHHHcCCCCCcc-CCCcCchhCCHHHHHHHHHhc-----CCCCCccCcccCCccCCHHHHHHH
Confidence            49999999999999999999999999999 999999999999999999954     467899999999999999999999


Q ss_pred             HHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCccccccccccccccccc
Q psy8251          81 ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAF  160 (434)
Q Consensus        81 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~  160 (434)
                      ++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+++++               
T Consensus        97 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~---------------  161 (190)
T 2i13_A           97 QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP---------------  161 (190)
T ss_dssp             HHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC---------------
T ss_pred             HHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC---------------
Confidence            99999999999999999999999999999999999999999999999999999999999999988               


Q ss_pred             chhhhhhhhceecccCCcccCChhhHHHHhhhccCCCCC
Q psy8251         161 AVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTG  199 (434)
Q Consensus       161 ~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~~~~  199 (434)
                         |. |+.|      ++.|.+...|..|+++|+|++||
T Consensus       162 ---~~-C~~C------~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          162 ---YK-CPEC------GKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             ---EE-CTTT------CCEESSHHHHHHHHTTC------
T ss_pred             ---eE-CCCC------CCccCCHHHHHHHHHhcCCCCCC
Confidence               55 6666      99999999999999999998875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=2.6e-29  Score=220.52  Aligned_cols=163  Identities=27%  Similarity=0.444  Sum_probs=147.2

Q ss_pred             CccccccCCHHHHHHHHHHcCCCCCCCCc--cchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecC--cCCcccCCHHHHH
Q psy8251           3 PRGFRGFRQVINLLKHRREHGGNLSFDNC--HICKETFYKHSELVRHLEREHNIPRSESSPWCCR--FCNKRMMTKLSLG   78 (434)
Q Consensus         3 ~~C~~~F~~~~~l~~H~~~h~~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~--~C~~~f~~~~~L~   78 (434)
                      +.|++.|.+...|..|++.|.++++|. |  +.|++.|.+...|..|++ .|    .++++|.|.  .|++.|.+...|.
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~~~~~~-C~~~~C~~~f~~~~~l~~H~~-~h----~~~~~~~C~~~~C~~~f~~~~~l~   91 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTGEKPFP-CKEEGCEKGFTSLHHLTRHSL-TH----TGEKNFTCDSDGCDLRFTTKANMK   91 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHCCCSSC-CSSTTCCCCCSSHHHHHHHHT-TT----TTCCCEECCSSSCCCEESCHHHHH
T ss_pred             CCCcchhCCHHHHHHHHHhcCCCCCcc-CCCCCCChhhCCHHHHHHHHH-Hc----cCCCceeCCCCCCCCccCCHHHHH
Confidence            789999999999999999999999999 9  889999999999999998 55    567899999  8999999999999


Q ss_pred             HHH-Hhc-cCCCceec--cccccccccchHHHchhhhcCCCCceeccc--cCcccCChhHHHhhhccccCCccccccccc
Q psy8251          79 IHE-RIH-TGQRPYIC--DWCGVGFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTGKLTGKFGQKM  152 (434)
Q Consensus        79 ~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~  152 (434)
                      .|+ +.| .++++|.|  +.|++.|.+...|..|+++|++++||.|+.  |++.|.+...|..|+++|++          
T Consensus        92 ~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~----------  161 (190)
T 1tf6_A           92 KHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----------  161 (190)
T ss_dssp             HHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS----------
T ss_pred             HHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC----------
Confidence            999 667 46789999  889999999999999999999999999988  99999999999999999988          


Q ss_pred             ccccccccchhhhhhhhceecccCCcccCChhhHHHHhhhccCC
Q psy8251         153 SALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGK  196 (434)
Q Consensus       153 ~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~  196 (434)
                                 +. |..|   ..|++.|.+...|..|+++|+|+
T Consensus       162 -----------~~-C~~~---~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          162 -----------YP-CKKD---DSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             -----------CC-CCST---TTCCCCCSCHHHHHHHHTTCC--
T ss_pred             -----------Cc-CCCC---CcCCCccccHHHHHHHHHhhcCC
Confidence                       22 6651   11399999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=1.7e-28  Score=215.24  Aligned_cols=141  Identities=33%  Similarity=0.577  Sum_probs=123.6

Q ss_pred             CCCCCCCCc--cchhhhcCCHHHHHHHHHhhcCCCCCCCCCeec--CcCCcccCCHHHHHHHHHhccCCCceecc--ccc
Q psy8251          23 GGNLSFDNC--HICKETFYKHSELVRHLEREHNIPRSESSPWCC--RFCNKRMMTKLSLGIHERIHTGQRPYICD--WCG   96 (434)
Q Consensus        23 ~~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~   96 (434)
                      .+.++|. |  +.|++.|.+...|..|++ .|    .++++|.|  +.|++.|.+...|..|+++|.++++|.|+  .|+
T Consensus         8 ~~~~~~~-C~~~~C~~~f~~~~~L~~H~~-~h----~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   81 (190)
T 1tf6_A            8 VVYKRYI-CSFADCGAAYNKNWKLQAHLC-KH----TGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCD   81 (190)
T ss_dssp             --CCCCB-CSSTTTCCBCSSHHHHHHHHH-HH----HCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCC
T ss_pred             CCCccee-CCCCCCcchhCCHHHHHHHHH-hc----CCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCC
Confidence            3567888 9  689999999999999998 45    46789999  88999999999999999999999999999  899


Q ss_pred             cccccchHHHchh-hhc-CCCCceec--cccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhhh--c
Q psy8251          97 VGFRSKANLLQHQ-PVH-TGQRKYNC--TVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQE--C  170 (434)
Q Consensus        97 ~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C  170 (434)
                      +.|.+...|..|+ +.| .++++|.|  +.|++.|.+...|..|+++|+++++                  |. |+.  |
T Consensus        82 ~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~------------------~~-C~~~~C  142 (190)
T 1tf6_A           82 LRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP------------------YE-CPHEGC  142 (190)
T ss_dssp             CEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCS------------------SB-CCSSSC
T ss_pred             CccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCC------------------cc-CCCCCC
Confidence            9999999999999 666 46789999  8899999999999999999999988                  55 655  6


Q ss_pred             eecccCCcccCChhhHHHHhhhcc
Q psy8251         171 LFAKNGGKAFSRKSFVTTHMRVHT  194 (434)
Q Consensus       171 ~~C~~C~~~F~~~~~L~~H~~~H~  194 (434)
                            ++.|.+...|..|+++|+
T Consensus       143 ------~k~F~~~~~L~~H~~~H~  160 (190)
T 1tf6_A          143 ------DKRFSLPSRLKRHEKVHA  160 (190)
T ss_dssp             ------CCBCSSHHHHHHHHTSSC
T ss_pred             ------CchhcCHHHHHHHHHHhC
Confidence                  999999999999998655

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.9e-25  Score=187.88  Aligned_cols=136  Identities=30%  Similarity=0.623  Sum_probs=126.5

Q ss_pred             CCCccccccCCHHHHHHHHH---HcCCCCCCCCccc-----hhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCc--CCcc
Q psy8251           1 MWPRGFRGFRQVINLLKHRR---EHGGNLSFDNCHI-----CKETFYKHSELVRHLEREHNIPRSESSPWCCRF--CNKR   70 (434)
Q Consensus         1 ~C~~C~~~F~~~~~l~~H~~---~h~~~~~~~~C~~-----C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~--C~~~   70 (434)
                      .|+.|++.|.+...|..|++   .|.++++|. |++     |++.|.+...|..|++. |    .++++|.|.+  |++.
T Consensus         5 ~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~-C~~c~C~~c~~~f~~~~~l~~H~~~-h----~~~~~~~C~~~~C~~~   78 (155)
T 2gli_A            5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFV-CHWGGCSRELRPFKAQYMLVVHMRR-H----TGEKPHKCTFEGCRKS   78 (155)
T ss_dssp             CBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCC-CCBTTCTTTTCCCSSHHHHHHHTHH-H----HCCCCCCCCSTTCCCC
T ss_pred             CcCCCccccCCHHHHHHHHHhhccCCCCccee-CCCCCccchhhhhhhHHHHHHHHHh-c----CCCCCccCCCCCCCCc
Confidence            58999999999999999999   688899998 775     35999999999999984 4    4678999985  9999


Q ss_pred             cCCHHHHHHHHHhccCCCceeccc--cccccccchHHHchh-hhcCCCCceeccc--cCcccCChhHHHhhhccccC
Q psy8251          71 MMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQ-PVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus        71 f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~  142 (434)
                      |.+...|..|+++|+++++|.|++  |++.|.+...|..|+ +.|.++++|.|++  |++.|.+...|..|+++|+|
T Consensus        79 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           79 YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            999999999999999999999998  999999999999998 8999999999998  99999999999999999886

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=6.1e-25  Score=185.93  Aligned_cols=143  Identities=29%  Similarity=0.559  Sum_probs=127.8

Q ss_pred             CCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcC-----CcccCCHHHHHHHHHhccCCCceeccc--ccc
Q psy8251          25 NLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFC-----NKRMMTKLSLGIHERIHTGQRPYICDW--CGV   97 (434)
Q Consensus        25 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C-----~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~   97 (434)
                      |.++. |+.|++.|.+...|..|++..|.  ..++++|.|..|     ++.|.+...|..|+++|+++++|.|++  |++
T Consensus         1 E~~~~-C~~C~~~f~~~~~L~~H~~~~h~--h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~   77 (155)
T 2gli_A            1 ETDCR-WDGCSQEFDSQEQLVHHINSEHI--HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRK   77 (155)
T ss_dssp             CCBCC-BTTCCCBCSCHHHHHHHHHHHTS--SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCC
T ss_pred             CCcCC-cCCCccccCCHHHHHHHHHhhcc--CCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCC
Confidence            34677 99999999999999999985331  156788998753     499999999999999999999999985  999


Q ss_pred             ccccchHHHchhhhcCCCCceeccc--cCcccCChhHHHhhh-ccccCCcccccccccccccccccchhhhhhhh--cee
Q psy8251          98 GFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVTTHM-RVHTGKLTGKFGQKMSALSGTAFAVEYEIIQE--CLF  172 (434)
Q Consensus        98 ~f~~~~~l~~H~~~h~~~~~~~C~~--C~k~F~~~~~L~~H~-~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~  172 (434)
                      .|.+...|..|+++|+++++|.|++  |++.|.+...|..|+ +.|.++++                  |. |+.  |  
T Consensus        78 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~------------------~~-C~~~~C--  136 (155)
T 2gli_A           78 SYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP------------------YV-CKLPGC--  136 (155)
T ss_dssp             CCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCC------------------EE-CCSTTT--
T ss_pred             cccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCC------------------ee-CCCCCC--
Confidence            9999999999999999999999998  999999999999999 79999888                  44 555  5  


Q ss_pred             cccCCcccCChhhHHHHhhhccC
Q psy8251         173 AKNGGKAFSRKSFVTTHMRVHTG  195 (434)
Q Consensus       173 C~~C~~~F~~~~~L~~H~~~H~~  195 (434)
                          ++.|.+...|..|+++|+|
T Consensus       137 ----~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          137 ----TKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             ----CCEESSHHHHHHHHHHSCC
T ss_pred             ----ccccCCHHHHHHHHHhhcC
Confidence                9999999999999999886

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=5.3e-24  Score=174.44  Aligned_cols=107  Identities=23%  Similarity=0.429  Sum_probs=96.5

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhh
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTH  136 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H  136 (434)
                      .|+++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H   97 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSH   97 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHH
Confidence            68889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCcccccccccccccccccchhhhhhhhceecccCCcccCC
Q psy8251         137 MRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSR  182 (434)
Q Consensus       137 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~  182 (434)
                      +++|++++|                  +. +..++.|..|++.|..
T Consensus        98 ~~~hh~~~p------------------~~-~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           98 IKSVHSQDP------------------SG-DSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHHTCCCT------------------TS-SSCCEEECCCCSSCCC
T ss_pred             hHHhcCCCC------------------CC-CCCCeecCCCCchhhh
Confidence            999998887                  44 6666777788988864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=5.6e-22  Score=160.92  Aligned_cols=115  Identities=29%  Similarity=0.590  Sum_probs=103.3

Q ss_pred             CCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHh---ccCCCceecccccccc
Q psy8251          23 GGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERI---HTGQRPYICDWCGVGF   99 (434)
Q Consensus        23 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~---h~~~~~~~C~~C~~~f   99 (434)
                      .++++|. |++|++.|.+...|..|++ .|    .++++|.|+.|++.|.+...|..|++.   +.++++|.|++|++.|
T Consensus         3 ~~~~~~~-C~~C~~~f~~~~~l~~H~~-~h----~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f   76 (124)
T 2dlq_A            3 SGSSGVE-CPTCHKKFLSKYYLKVHNR-KH----TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF   76 (124)
T ss_dssp             CCCSSCC-CTTTCCCCSSHHHHHHHHH-HH----SSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEE
T ss_pred             CCCCCCC-CCCCCCcCCCHHHHHHHHH-hC----CCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCcc
Confidence            4678898 9999999999999999998 45    467899999999999999999999985   5778899999999999


Q ss_pred             ccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhc-cccCC
Q psy8251         100 RSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMR-VHTGK  143 (434)
Q Consensus       100 ~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~-~h~~~  143 (434)
                      .+...|..|+++|++++||.|++|++.|.+...|..|++ .|.++
T Consensus        77 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           77 RRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             SSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             CCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            999999999999999999999999999999999999997 45554

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=3.3e-22  Score=161.05  Aligned_cols=112  Identities=30%  Similarity=0.673  Sum_probs=105.4

Q ss_pred             CCCCCCCCccc--hhhhcCCHHHHHHHHHhhcCCCCCCCCCeecC--cCCcccCCHHHHHHHHHhccCCCceeccccccc
Q psy8251          23 GGNLSFDNCHI--CKETFYKHSELVRHLEREHNIPRSESSPWCCR--FCNKRMMTKLSLGIHERIHTGQRPYICDWCGVG   98 (434)
Q Consensus        23 ~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~   98 (434)
                      .++++|. |++  |++.|.+...|..|++ .|    .++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.
T Consensus         2 ~~~~~~~-C~~~~C~~~f~~~~~l~~H~~-~h----~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   75 (119)
T 2jp9_A            2 SEKRPFM-CAYPGCNKRYFKLSHLQMHSR-KH----TGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRK   75 (119)
T ss_dssp             CSSCCBC-CCSTTSCCCBSCHHHHHHHHH-HH----HTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             CCCeeee-CCCCCCcchhCCHHHHHHHHH-hh----CCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCch
Confidence            5678998 997  9999999999999998 45    467899999  799999999999999999999999999999999


Q ss_pred             cccchHHHchhhhcCCCCceec--cccCcccCChhHHHhhhccc
Q psy8251          99 FRSKANLLQHQPVHTGQRKYNC--TVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus        99 f~~~~~l~~H~~~h~~~~~~~C--~~C~k~F~~~~~L~~H~~~h  140 (434)
                      |.+...|..|+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        76 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           76 FSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             hCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999999999  89999999999999999876

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=5.2e-22  Score=159.91  Aligned_cols=112  Identities=38%  Similarity=0.788  Sum_probs=105.6

Q ss_pred             CCCCCeecCc--CCcccCCHHHHHHHHHhccCCCceecc--ccccccccchHHHchhhhcCCCCceeccccCcccCChhH
Q psy8251          57 SESSPWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICD--WCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSF  132 (434)
Q Consensus        57 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~  132 (434)
                      .++++|.|.+  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4678999997  999999999999999999999999999  799999999999999999999999999999999999999


Q ss_pred             HHhhhccccCCcccccccccccccccccchhhhhh--hhceecccCCcccCChhhHHHHhhhc
Q psy8251         133 VTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEII--QECLFAKNGGKAFSRKSFVTTHMRVH  193 (434)
Q Consensus       133 L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~C~~C~~~F~~~~~L~~H~~~H  193 (434)
                      |..|+++|+++++                  |. |  +.|      ++.|.+...|..|+++|
T Consensus        82 l~~H~~~h~~~~~------------------~~-C~~~~C------~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKP------------------FS-CRWPSC------QKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCC------------------EE-CCSTTC------CCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCC------------------ee-CCCCCC------ccccCCHHHHHHHHhcC
Confidence            9999999999988                  55 5  455      99999999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=9.3e-22  Score=166.30  Aligned_cols=119  Identities=34%  Similarity=0.592  Sum_probs=108.3

Q ss_pred             CCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCC--------eecCcCCcccCCHHHHHHHHHhccCCCceeccc
Q psy8251          23 GGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSP--------WCCRFCNKRMMTKLSLGIHERIHTGQRPYICDW   94 (434)
Q Consensus        23 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   94 (434)
                      .++.+|. |+.|++.|.+...|..|++.+|.    +..+        |.|..|++.|.+...|..|+++|+++++|.|.+
T Consensus        21 ~~~~~~~-C~~C~~~f~~~~~L~~H~~~~H~----~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   95 (155)
T 2rpc_A           21 EAQLSRP-KKSCDRTFSTMHELVTHVTMEHV----GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPF   95 (155)
T ss_dssp             TTCCSSS-CCCCCCCBSSHHHHHHHHHTTTS----CCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSC
T ss_pred             hhhcccc-cccCCcccCCHHHHHHHHHhhcC----CCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCc
Confidence            3456787 99999999999999999986573    3332        899999999999999999999999999999998


Q ss_pred             --cccccccchHHHchhhhcCCCCceeccc--cCcccCChhHHHhhhccccCCccc
Q psy8251          95 --CGVGFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTGKLTG  146 (434)
Q Consensus        95 --C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~~~~  146 (434)
                        |++.|.+...|..|+++|+++++|.|++  |++.|.+...|..|+++|++++++
T Consensus        96 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~  151 (155)
T 2rpc_A           96 PGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSG  151 (155)
T ss_dssp             TTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCS
T ss_pred             CCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence              9999999999999999999999999997  999999999999999999999883

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=1e-22  Score=166.72  Aligned_cols=108  Identities=27%  Similarity=0.432  Sum_probs=99.0

Q ss_pred             HHHHHcCCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccc
Q psy8251          17 KHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCG   96 (434)
Q Consensus        17 ~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~   96 (434)
                      .|.++|.|+++|. |++||+.|.+...|..|++ .|    .++++|.|++|++.|.+...|..|+++|++++||.|++|+
T Consensus        12 h~~~~h~Gek~y~-C~~C~k~F~~~~~L~~H~~-~H----~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~   85 (133)
T 2lt7_A           12 HYELIVDGRVYYI-CIVCKRSYVCLTSLRRHFN-IH----SWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACG   85 (133)
T ss_dssp             EEEEEETTEEEEE-ETTTCCEESCHHHHHHHHH-HH----HCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSC
T ss_pred             hceeecCCCcCeE-CCCCCCCcCCHHHHHHHHH-Hc----CCCCCeeCCccCeecccccchhhhccccCCCccccCCCCC
Confidence            3456788999999 9999999999999999998 66    6789999999999999999999999999999999999999


Q ss_pred             cccccchHHHchhhhcCCCC------ceeccccCcccCCh
Q psy8251          97 VGFRSKANLLQHQPVHTGQR------KYNCTVCGKAFSRK  130 (434)
Q Consensus        97 ~~f~~~~~l~~H~~~h~~~~------~~~C~~C~k~F~~~  130 (434)
                      +.|.....|..|+++|++++      +|+|.+|++.|...
T Consensus        86 k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           86 KSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            99999999999999998764      59999999988643

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.2e-21  Score=158.91  Aligned_cols=116  Identities=34%  Similarity=0.714  Sum_probs=106.6

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhh---cCCCCceeccccCcccCChhHH
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPV---HTGQRKYNCTVCGKAFSRKSFV  133 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~k~F~~~~~L  133 (434)
                      +++++|.|+.|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.   +.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            5678999999999999999999999999999999999999999999999999985   5788999999999999999999


Q ss_pred             HhhhccccCCcccccccccccccccccchhhhhhhhceecccCCcccCChhhHHHHhh-hccCCC
Q psy8251         134 TTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMR-VHTGKL  197 (434)
Q Consensus       134 ~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~-~H~~~~  197 (434)
                      ..|+++|+++++                  |. |+.|      ++.|.+...|..|++ .|.++.
T Consensus        83 ~~H~~~h~~~~~------------------~~-C~~C------~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHTGEMP------------------YK-CSSC------SQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHSSSCS------------------EE-CSSS------CCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcCCCCC------------------cc-CCCc------cchhCCHHHHHHHHHHHCCCCC
Confidence            999999999988                  44 5555      999999999999997 576653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=1e-21  Score=159.48  Aligned_cols=115  Identities=32%  Similarity=0.624  Sum_probs=81.4

Q ss_pred             CCCeecC--cCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccc--cCcccCChhHHH
Q psy8251          59 SSPWCCR--FCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVT  134 (434)
Q Consensus        59 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~k~F~~~~~L~  134 (434)
                      +++|.|+  .|++.|.+...|..|+++| ++++|.|.+|++.|.+...|..|+++|+++++|.|+.  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4567777  6777777777777777777 6777777777777777777777777777777777765  777777777777


Q ss_pred             hhhccccCCcccccccccccccccccchhhhhhh--hceecccCCcccCChhhHHHHhhhccCCCCC
Q psy8251         135 THMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQ--ECLFAKNGGKAFSRKSFVTTHMRVHTGKLTG  199 (434)
Q Consensus       135 ~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~C~~C~~~F~~~~~L~~H~~~H~~~~~~  199 (434)
                      .|+++|+++++                  |. |+  .|      ++.|.+...|..|+++|++++++
T Consensus        82 ~H~~~h~~~~~------------------~~-C~~~~C------~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           82 THVRIHTGDRP------------------YV-CPFDGC------NKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHCCCC------------------CC-CCSTTC------CCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHhCCCCc------------------eE-CCCCCC------CCccCCHHHHHHHHHHHcccccC
Confidence            77777777766                  44 53  34      77777777777777777776553

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.85  E-value=1.5e-21  Score=165.01  Aligned_cols=121  Identities=30%  Similarity=0.534  Sum_probs=111.2

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHh-ccCCCc--------eeccccccccccchHHHchhhhcCCCCceeccc--cCc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERI-HTGQRP--------YICDWCGVGFRSKANLLQHQPVHTGQRKYNCTV--CGK  125 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~k  125 (434)
                      ....+|.|..|++.|.+...|..|++. |.++.+        |.|.+|++.|.+...|..|+++|+++++|.|.+  |++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            346789999999999999999999997 766654        899999999999999999999999999999998  999


Q ss_pred             ccCChhHHHhhhccccCCcccccccccccccccccchhhhhhhh--ceecccCCcccCChhhHHHHhhhccCCCCCCCc
Q psy8251         126 AFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQE--CLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKFG  202 (434)
Q Consensus       126 ~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  202 (434)
                      .|.+...|..|+++|+++++                  |. |..  |      ++.|.....|..|+++|+++++|.|.
T Consensus       101 ~f~~~~~L~~H~~~h~~~~~------------------~~-C~~~~C------~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          101 IFARSENLKIHKRTHTGEKP------------------FK-CEFEGC------DRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             EESCHHHHHHHHTTTCSSCS------------------BC-CSSTTC------CCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCHHHHHHHHHhhCCCCC------------------cc-CCCCCC------CCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999988                  55 664  6      99999999999999999999999883

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.84  E-value=1.8e-21  Score=158.06  Aligned_cols=114  Identities=30%  Similarity=0.646  Sum_probs=97.2

Q ss_pred             CCCCCCcc--chhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccc--cccccc
Q psy8251          25 NLSFDNCH--ICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFR  100 (434)
Q Consensus        25 ~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~  100 (434)
                      +++|. |+  .|++.|.+...|..|++ .|     ++++|.|..|++.|.+...|..|+++|.++++|.|..  |++.|.
T Consensus         3 ~~~~~-C~~~~C~~~f~~~~~l~~H~~-~h-----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   75 (124)
T 1ubd_C            3 PRTIA-CPHKGCTKMFRDNSAMRKHLH-TH-----GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS   75 (124)
T ss_dssp             --CEE-CCSTTCCCEESSHHHHHHHHG-GG-----SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEES
T ss_pred             CCccc-CCCCCCcCccCCHHHHHHHHH-Hc-----CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccC
Confidence            46777 88  89999999999999987 55     3578999999999999999999999999999999976  999999


Q ss_pred             cchHHHchhhhcCCCCceecc--ccCcccCChhHHHhhhccccCCcc
Q psy8251         101 SKANLLQHQPVHTGQRKYNCT--VCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       101 ~~~~l~~H~~~h~~~~~~~C~--~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      +...|..|+++|+++++|.|+  .|++.|.+...|..|+++|+++++
T Consensus        76 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           76 LDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             CHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             CHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            999999999999999999995  599999999999999999988765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=2e-18  Score=133.18  Aligned_cols=89  Identities=34%  Similarity=0.635  Sum_probs=80.8

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhh
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTH  136 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H  136 (434)
                      .++++|.|.+|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|+++|+++++|.|++|++.|.+...|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCcc
Q psy8251         137 MRVHTGKLT  145 (434)
Q Consensus       137 ~~~h~~~~~  145 (434)
                      +++|+++.+
T Consensus        84 ~~~h~~~~~   92 (96)
T 2dmd_A           84 LRSHTGDSG   92 (96)
T ss_dssp             HTTCCSCCC
T ss_pred             HHHhcCCCC
Confidence            999988765

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.74  E-value=2.8e-18  Score=134.92  Aligned_cols=90  Identities=31%  Similarity=0.740  Sum_probs=83.2

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhh
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTH  136 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H  136 (434)
                      ..+++|.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|++|++.|.+...|..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCccc
Q psy8251         137 MRVHTGKLTG  146 (434)
Q Consensus       137 ~~~h~~~~~~  146 (434)
                      +++|++++++
T Consensus        93 ~~~H~~~~~~  102 (106)
T 2ee8_A           93 KTLHMQTSSP  102 (106)
T ss_dssp             HHHTTSCCCC
T ss_pred             HHHhCCCCCC
Confidence            9999998873

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.74  E-value=1.8e-18  Score=131.61  Aligned_cols=86  Identities=34%  Similarity=0.747  Sum_probs=76.6

Q ss_pred             CCCeecC--cCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhh
Q psy8251          59 SSPWCCR--FCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTH  136 (434)
Q Consensus        59 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H  136 (434)
                      +++|.|+  .|++.|.....|..|+++|.++++|.|..|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            5689998  59999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCc
Q psy8251         137 MRVHTGKL  144 (434)
Q Consensus       137 ~~~h~~~~  144 (434)
                      +++|++++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            99998864

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=2.3e-18  Score=128.61  Aligned_cols=82  Identities=41%  Similarity=0.855  Sum_probs=72.5

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccc
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h  140 (434)
                      ||.|..|++.|.....|..|+++|.++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58888999999988899999988888888999999999998899999998888888999999999999999999999888


Q ss_pred             cC
Q psy8251         141 TG  142 (434)
Q Consensus       141 ~~  142 (434)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            65

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.1e-17  Score=127.11  Aligned_cols=87  Identities=37%  Similarity=0.765  Sum_probs=79.9

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCC--CceeccccCcccCChhHHH
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQ--RKYNCTVCGKAFSRKSFVT  134 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~k~F~~~~~L~  134 (434)
                      .++++|.|.+|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.|+++  ++|.|++|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            56789999999999999999999999999999999999999999999999999999987  8999999999999999999


Q ss_pred             hhhc-cccCC
Q psy8251         135 THMR-VHTGK  143 (434)
Q Consensus       135 ~H~~-~h~~~  143 (434)
                      .|++ .|.++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9986 67664

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.8e-17  Score=127.76  Aligned_cols=92  Identities=32%  Similarity=0.564  Sum_probs=84.5

Q ss_pred             ccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchh
Q psy8251          84 HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE  163 (434)
Q Consensus        84 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~  163 (434)
                      +.++++|.|.+|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|++.|+++++                  
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------------   64 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP------------------   64 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC------------------
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC------------------
Confidence            45788999999999999999999999999999999999999999999999999999999888                  


Q ss_pred             hhhhhhceecccCCcccCChhhHHHHhhhccCCCCCC
Q psy8251         164 YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGK  200 (434)
Q Consensus       164 ~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~  200 (434)
                      |. |..|      ++.|.....|..|+++|+++.+..
T Consensus        65 ~~-C~~C------~~~f~~~~~l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           65 FK-CQIC------PYASRNSSQLTVHLRSHTGDSGPS   94 (96)
T ss_dssp             EE-CSSS------SCEESSHHHHHHHHTTCCSCCCCC
T ss_pred             cc-CCCC------CCccCCHHHHHHHHHHhcCCCCCC
Confidence            44 5555      999999999999999999986543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.69  E-value=2.9e-17  Score=129.05  Aligned_cols=92  Identities=32%  Similarity=0.693  Sum_probs=85.5

Q ss_pred             cCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhh
Q psy8251          85 TGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEY  164 (434)
Q Consensus        85 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~  164 (434)
                      .++++|.|.+|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|+++++                  |
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------------~   74 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP------------------F   74 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT------------------T
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC------------------e
Confidence            4578899999999999999999999999999999999999999999999999999999988                  5


Q ss_pred             hhhhhceecccCCcccCChhhHHHHhhhccCCCCCCC
Q psy8251         165 EIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKLTGKF  201 (434)
Q Consensus       165 ~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  201 (434)
                      . |..|      ++.|.+...|..|+++|+++++|..
T Consensus        75 ~-C~~C------~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           75 K-CQEC------GKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             S-CSSS------CCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             E-CCCc------CCcccCHHHHHHHHHHhCCCCCCcC
Confidence            5 6666      9999999999999999999988753

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=2.8e-18  Score=137.10  Aligned_cols=98  Identities=17%  Similarity=0.190  Sum_probs=84.9

Q ss_pred             HHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHh--ccCCCcee-cccccccc--ccchHHHchhhhcCCCCc
Q psy8251          43 ELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERI--HTGQRPYI-CDWCGVGF--RSKANLLQHQPVHTGQRK  117 (434)
Q Consensus        43 ~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~  117 (434)
                      .|..|++ .|    .++++|.|.+|++.|.....|..|+++  |.+++++. |.+|++.|  .....|..|+++|++++|
T Consensus         6 ~l~~H~~-~H----~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~   80 (115)
T 2dmi_A            6 SGKLYGS-IF----TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV   80 (115)
T ss_dssp             CCCCCCC-CC----CCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS
T ss_pred             hhhhhee-ee----CCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc
Confidence            4556665 44    678899999999999999999999998  77777654 99999998  899999999999999999


Q ss_pred             eeccccCcccCChhHHHhhhccccCCcc
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      |.|++|++.|.+...|..|++.|+....
T Consensus        81 ~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           81 LKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             eECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            9999999999999999999999876544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.5e-17  Score=131.09  Aligned_cols=86  Identities=24%  Similarity=0.520  Sum_probs=44.0

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhh
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHM  137 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~  137 (434)
                      ++++|.|.+|++.|.....|..|+++|  .++|.|.+|++.|.....|..|++ |.++++|.|++|++.|.+...|..|+
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~   89 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQ   89 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHH
Confidence            344555555555555555555555554  234555555555555555555553 55555555555555555555555555


Q ss_pred             c-cccCCccc
Q psy8251         138 R-VHTGKLTG  146 (434)
Q Consensus       138 ~-~h~~~~~~  146 (434)
                      + .|.+++++
T Consensus        90 ~~~H~~~~~~   99 (107)
T 1wjp_A           90 VEVHNQNNMA   99 (107)
T ss_dssp             HHTSCCCCCC
T ss_pred             HHHcCCCCCC
Confidence            4 44444443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=4.1e-17  Score=129.12  Aligned_cols=86  Identities=33%  Similarity=0.645  Sum_probs=82.2

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhh
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTH  136 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H  136 (434)
                      .++++|.| .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++++|.|++|++.|.+...|..|
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH   84 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHH
Confidence            67899999 89999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCC
Q psy8251         137 MRVHTGK  143 (434)
Q Consensus       137 ~~~h~~~  143 (434)
                      ++.|+..
T Consensus        85 ~~~~~~~   91 (110)
T 2csh_A           85 VTSCTKS   91 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHcccc
Confidence            9998764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.67  E-value=2.8e-17  Score=124.98  Aligned_cols=87  Identities=34%  Similarity=0.751  Sum_probs=78.5

Q ss_pred             CCCceecc--ccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchh
Q psy8251          86 GQRPYICD--WCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVE  163 (434)
Q Consensus        86 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~  163 (434)
                      ++++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++.|+++++                  
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------------   62 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP------------------   62 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC------------------
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC------------------
Confidence            46899998  5999999999999999999999999999999999999999999999999988                  


Q ss_pred             hhhhhhceecccCCcccCChhhHHHHhhhccCCC
Q psy8251         164 YEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKL  197 (434)
Q Consensus       164 ~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~~  197 (434)
                      |. |..|      ++.|.+...|..|+++|++++
T Consensus        63 ~~-C~~C------~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           63 FA-CDIC------GRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             EE-CTTT------CCEESSHHHHHHHHGGGGC--
T ss_pred             cc-CCCC------CchhCCHHHHHHHHHHhcccC
Confidence            55 6666      999999999999999999864

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.65  E-value=4.8e-17  Score=121.31  Aligned_cols=82  Identities=41%  Similarity=0.756  Sum_probs=76.5

Q ss_pred             ceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhh
Q psy8251          89 PYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQ  168 (434)
Q Consensus        89 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~  168 (434)
                      ||.|.+|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++.|+++++                  |. |.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------------~~-C~   61 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP------------------HK-CQ   61 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCC------------------EE-CT
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCC------------------Cc-CC
Confidence            589999999999999999999999999999999999999999999999999999988                  55 66


Q ss_pred             hceecccCCcccCChhhHHHHhhhccC
Q psy8251         169 ECLFAKNGGKAFSRKSFVTTHMRVHTG  195 (434)
Q Consensus       169 ~C~~C~~C~~~F~~~~~L~~H~~~H~~  195 (434)
                      .|      ++.|.+.+.|..|+++|+|
T Consensus        62 ~C------~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           62 VC------GKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TT------SCEESSHHHHHHHHHHHC-
T ss_pred             Cc------chhhCChHHHHHHHHhhCC
Confidence            66      9999999999999999975

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=3.6e-17  Score=128.79  Aligned_cols=94  Identities=16%  Similarity=0.228  Sum_probs=86.1

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTA  159 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~  159 (434)
                      ++++|.++++|.|.+|++.|.....|..|+++|  +++|.|++|++.|.....|..|+. |+++++              
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~--------------   69 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKK--------------   69 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG--------------
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCC--------------
Confidence            356789999999999999999999999999998  478999999999999999999996 999888              


Q ss_pred             cchhhhhhhhceecccCCcccCChhhHHHHhh-hccCCCCCCC
Q psy8251         160 FAVEYEIIQECLFAKNGGKAFSRKSFVTTHMR-VHTGKLTGKF  201 (434)
Q Consensus       160 ~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~-~H~~~~~~~C  201 (434)
                          |. |..|      ++.|.....|..|++ +|.++++|.+
T Consensus        70 ----~~-C~~C------~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           70 ----LT-CLEC------MRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             ----GE-EGGG------TEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             ----cc-Cccc------cchhCCHHHHHHHHHHHcCCCCCCCC
Confidence                66 7777      999999999999997 8999999876

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.64  E-value=8.5e-17  Score=111.41  Aligned_cols=57  Identities=39%  Similarity=0.894  Sum_probs=33.3

Q ss_pred             CCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251          87 QRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus        87 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      |+||.|.+||+.|.....|..|+++|++++||.|++||+.|.+.+.|..|+++|+|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            455555555555555555555555555555555555666666666666665555554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.64  E-value=3e-16  Score=121.75  Aligned_cols=86  Identities=33%  Similarity=0.695  Sum_probs=79.8

Q ss_pred             CCCCCeecCc--CCcccCCHHHHHHHHHhccCCCceecc--ccccccccchHHHchhhhcCCCCceeccccCcccCChhH
Q psy8251          57 SESSPWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICD--WCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSF  132 (434)
Q Consensus        57 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~  132 (434)
                      ...++|.|..  |++.|.....|..|+++|.++++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.+...
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            3567899997  999999999999999999999999996  699999999999999999999999999999999999999


Q ss_pred             HHhhhccccC
Q psy8251         133 VTTHMRVHTG  142 (434)
Q Consensus       133 L~~H~~~h~~  142 (434)
                      |..|+++|++
T Consensus        91 l~~H~~~H~~  100 (100)
T 2ebt_A           91 LALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhCC
Confidence            9999999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=2.2e-16  Score=119.66  Aligned_cols=83  Identities=37%  Similarity=0.780  Sum_probs=74.5

Q ss_pred             CCCeecCc--CCcccCCHHHHHHHHHhccCCCceecc--ccccccccchHHHchhhhcCCCCceeccccCcccCChhHHH
Q psy8251          59 SSPWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICD--WCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVT  134 (434)
Q Consensus        59 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~  134 (434)
                      ..+|.|..  |++.|.....|..|++.|.++++|.|+  .|++.|.+...|..|++.|+++++|.|+.|++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45789998  999999999999999999999999997  59999999999999999999999999999999999999999


Q ss_pred             hhhcccc
Q psy8251         135 THMRVHT  141 (434)
Q Consensus       135 ~H~~~h~  141 (434)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9998873

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=1.1e-17  Score=133.59  Aligned_cols=98  Identities=17%  Similarity=0.202  Sum_probs=87.6

Q ss_pred             HHHHHHHHhccCCCceeccccccccccchHHHchhhh--cCCCCcee-ccccCccc--CChhHHHhhhccccCCcccccc
Q psy8251          75 LSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPV--HTGQRKYN-CTVCGKAF--SRKSFVTTHMRVHTGKLTGKFG  149 (434)
Q Consensus        75 ~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~k~F--~~~~~L~~H~~~h~~~~~~~~~  149 (434)
                      ..|..|+++|+++++|.|.+|++.|.+...|..|++.  |.+++++. |++|++.|  .....|..|+++|+++++    
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~----   80 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV----   80 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS----
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc----
Confidence            4577899999999999999999999999999999998  77777655 99999999  899999999999999988    


Q ss_pred             cccccccccccchhhhhhhhceecccCCcccCChhhHHHHhhhccCCC
Q psy8251         150 QKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGKL  197 (434)
Q Consensus       150 ~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~~  197 (434)
                                    |. |+.|      ++.|.....|..|+++|+...
T Consensus        81 --------------~~-C~~C------~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           81 --------------LK-CMYC------GHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             --------------CB-CSSS------CCBCSSHHHHHHHHHHTTTTT
T ss_pred             --------------eE-CCCC------CCccCCHHHHHHHHHHhCCcc
Confidence                          55 6666      999999999999999987653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.5e-16  Score=121.03  Aligned_cols=88  Identities=39%  Similarity=0.785  Sum_probs=79.9

Q ss_pred             cCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCC--cccccccccccccccccch
Q psy8251          85 TGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK--LTGKFGQKMSALSGTAFAV  162 (434)
Q Consensus        85 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~--~~~~~~~~~~~~~~~~~~~  162 (434)
                      .++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|++.|+++  ++                 
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-----------------   65 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-----------------   65 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSS-----------------
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCc-----------------
Confidence            57889999999999999999999999999999999999999999999999999999987  55                 


Q ss_pred             hhhhhhhceecccCCcccCChhhHHHHhh-hccCCC
Q psy8251         163 EYEIIQECLFAKNGGKAFSRKSFVTTHMR-VHTGKL  197 (434)
Q Consensus       163 ~~~~C~~C~~C~~C~~~F~~~~~L~~H~~-~H~~~~  197 (434)
                       |. |..|      ++.|.....|..|++ +|.++.
T Consensus        66 -~~-C~~C------~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           66 -YI-CQSC------GKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             -BC-CSSS------CCCBSSHHHHHHHHHHTSCCCS
T ss_pred             -eE-CCCc------cchhCCHHHHHHHHHHhcCCCC
Confidence             44 6555      999999999999996 787753

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.1e-16  Score=124.02  Aligned_cols=87  Identities=36%  Similarity=0.673  Sum_probs=81.2

Q ss_pred             hccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccch
Q psy8251          83 IHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAV  162 (434)
Q Consensus        83 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~  162 (434)
                      .|+++++|.| .|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++                 
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-----------------   65 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-----------------   65 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC-----------------
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC-----------------
Confidence            5789999999 9999999999999999999999999999999999999999999999999888                 


Q ss_pred             hhhhhhhceecccCCcccCChhhHHHHhhhccC
Q psy8251         163 EYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG  195 (434)
Q Consensus       163 ~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~  195 (434)
                       |. |+.|      ++.|.....|..|+++|++
T Consensus        66 -~~-C~~C------~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           66 -YE-CNIC------AKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             -EE-CSSS------CCEESCHHHHHHHHHHHHH
T ss_pred             -ee-CCCC------cchhcCHHHHHHHHHHccc
Confidence             44 5555      9999999999999998875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.61  E-value=4.5e-16  Score=107.74  Aligned_cols=58  Identities=34%  Similarity=0.700  Sum_probs=51.2

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCC
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQR  116 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  116 (434)
                      |+||.|.+||+.|...+.|..|+++|++++||.|++||+.|...+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6789999999999999999999999999999999999999999999999999988864

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.60  E-value=7.5e-17  Score=122.12  Aligned_cols=83  Identities=22%  Similarity=0.428  Sum_probs=71.1

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhc
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMR  138 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~  138 (434)
                      ++||.|..|++.|.....|..|+++|+++++|.|+.|++.|.....|..|++.|++ .+|.|+.|++.|.+...|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            36888888888888888888888888888888888888888888888888888874 77889999999998889999888


Q ss_pred             cccC
Q psy8251         139 VHTG  142 (434)
Q Consensus       139 ~h~~  142 (434)
                      .+++
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=2.1e-15  Score=113.01  Aligned_cols=78  Identities=28%  Similarity=0.537  Sum_probs=69.1

Q ss_pred             Ceec--CcCCcccCCHHHHHHHHHhccCCCceeccc--cccccccchHHHchhhhcCCCCceeccc---cCcccCChhHH
Q psy8251          61 PWCC--RFCNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTV---CGKAFSRKSFV  133 (434)
Q Consensus        61 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~k~F~~~~~L  133 (434)
                      ||.|  +.|++.|.....|..|+++|.++++|.|+.  |++.|.+...|..|+++|++   |.|+.   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5888  889999999999999999998889999988  99999999999999988887   89988   99999999999


Q ss_pred             Hhhhcccc
Q psy8251         134 TTHMRVHT  141 (434)
Q Consensus       134 ~~H~~~h~  141 (434)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99988775

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=5.1e-15  Score=109.37  Aligned_cols=72  Identities=31%  Similarity=0.600  Sum_probs=60.5

Q ss_pred             CCCCCeecCc--CCcccCCHHHHHHHHH-hccCCCceeccc--cccccccchHHHchhhhcCCCCceeccccCcccC
Q psy8251          57 SESSPWCCRF--CNKRMMTKLSLGIHER-IHTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFS  128 (434)
Q Consensus        57 ~~~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~  128 (434)
                      +++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.....|..|+++|++++||.|++|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4567888886  8888888888888888 688888888888  8888888888888888888888888888888874

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=5.2e-15  Score=112.03  Aligned_cols=83  Identities=36%  Similarity=0.754  Sum_probs=76.6

Q ss_pred             CCceeccc--cccccccchHHHchhhhcCCCCceecc--ccCcccCChhHHHhhhccccCCcccccccccccccccccch
Q psy8251          87 QRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCT--VCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAV  162 (434)
Q Consensus        87 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~  162 (434)
                      .++|.|..  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++.|+++++                 
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-----------------   65 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP-----------------   65 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC-----------------
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC-----------------
Confidence            46799999  999999999999999999999999997  699999999999999999999988                 


Q ss_pred             hhhhhhhceecccCCcccCChhhHHHHhhhcc
Q psy8251         163 EYEIIQECLFAKNGGKAFSRKSFVTTHMRVHT  194 (434)
Q Consensus       163 ~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~  194 (434)
                       |. |+.|      ++.|...+.|..|+++|.
T Consensus        66 -~~-C~~C------~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           66 -FQ-CQKC------DRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             -EE-CSSS------SCEESSHHHHHHHGGGGC
T ss_pred             -cc-CCCC------CcccCCHHHHHHHHHhhC
Confidence             44 5555      999999999999999884

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.53  E-value=6.9e-15  Score=113.94  Aligned_cols=85  Identities=33%  Similarity=0.667  Sum_probs=78.1

Q ss_pred             CCCceeccc--cccccccchHHHchhhhcCCCCceecc--ccCcccCChhHHHhhhccccCCcccccccccccccccccc
Q psy8251          86 GQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCT--VCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFA  161 (434)
Q Consensus        86 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~  161 (434)
                      ..++|.|..  |++.|.....|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++                
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~----------------   75 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP----------------   75 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS----------------
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC----------------
Confidence            456899997  999999999999999999999999996  699999999999999999999988                


Q ss_pred             hhhhhhhhceecccCCcccCChhhHHHHhhhccC
Q psy8251         162 VEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTG  195 (434)
Q Consensus       162 ~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~  195 (434)
                        |. |..|      ++.|.....|..|+++|++
T Consensus        76 --~~-C~~C------~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           76 --FQ-CGVC------NRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             --CB-CSSS------CCBCSSHHHHHHHHHHHCC
T ss_pred             --eE-CCCC------cCccCCHHHHHHHHHHhCC
Confidence              55 6666      9999999999999999975

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.52  E-value=9.2e-16  Score=116.08  Aligned_cols=83  Identities=20%  Similarity=0.463  Sum_probs=76.2

Q ss_pred             CCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhh
Q psy8251          87 QRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEI  166 (434)
Q Consensus        87 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (434)
                      ++||.|++|++.|.+...|..|+++|++++||.|+.|++.|.+...|..|++.|++ .+                  +. 
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~------------------~~-   60 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LP------------------IL-   60 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HH------------------HH-
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-Cc------------------ch-
Confidence            57899999999999999999999999999999999999999999999999999985 33                  55 


Q ss_pred             hhhceecccCCcccCChhhHHHHhhhccC
Q psy8251         167 IQECLFAKNGGKAFSRKSFVTTHMRVHTG  195 (434)
Q Consensus       167 C~~C~~C~~C~~~F~~~~~L~~H~~~H~~  195 (434)
                      |..|      ++.|.....|..|++.+++
T Consensus        61 c~~C------~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           61 EDKV------EELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHH------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH------HHHHHHHhhhHHHHHHHHH
Confidence            8888      9999999999999987553

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=7.3e-15  Score=110.39  Aligned_cols=83  Identities=20%  Similarity=0.348  Sum_probs=54.8

Q ss_pred             HHHHHHHcCCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccc
Q psy8251          15 LLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDW   94 (434)
Q Consensus        15 l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   94 (434)
                      |..|+++|.++++|. |++|++.|.....|..|++.+|... ..+++|.|..|++.|.....|..|+++|++++++.|..
T Consensus         3 ~~~H~~~H~~~k~~~-C~~C~~~f~~~~~l~~H~~~~~~~~-~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYA-CSHCDKTFRQKQLLDMHFKRYHDPN-FVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTCCSTTCCCCCCEE-CSSSSCEESSHHHHHHHHHHTTCSS-CCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cccccceecCCCCCc-CCCCCCccCCHHHHHHHHHHhcCCc-CCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            455677777777777 7777777777777777776444210 01256777777777777777777777777777777777


Q ss_pred             ccccc
Q psy8251          95 CGVGF   99 (434)
Q Consensus        95 C~~~f   99 (434)
                      |+..+
T Consensus        81 ~~~~~   85 (86)
T 1x6h_A           81 SGPSS   85 (86)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            66543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4e-14  Score=104.53  Aligned_cols=73  Identities=26%  Similarity=0.561  Sum_probs=66.3

Q ss_pred             CCCCCCCCccc--hhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCc--CCcccCCHHHHHHHHHhccCCCceeccccccc
Q psy8251          23 GGNLSFDNCHI--CKETFYKHSELVRHLEREHNIPRSESSPWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDWCGVG   98 (434)
Q Consensus        23 ~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~   98 (434)
                      +++++|. |+.  |++.|.+...|..|++..|    .++++|.|..  |++.|.....|..|+++|+++++|.|.+|++.
T Consensus         3 ~~~~~~~-C~~~~C~~~f~~~~~L~~H~~~~H----~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A            3 SGSSGMP-CDFPGCGRIFSNRQYLNHHKKYQH----IHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS   77 (79)
T ss_dssp             SCCSSEE-CSSTTTCCEESSHHHHHHHHHHGG----GSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred             CCCCCcc-CCCCCCcCccCCHHHHHHHHHHHh----CCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence            4677888 886  9999999999999998556    6788999999  99999999999999999999999999999998


Q ss_pred             cc
Q psy8251          99 FR  100 (434)
Q Consensus        99 f~  100 (434)
                      |.
T Consensus        78 F~   79 (79)
T 2dlk_A           78 SG   79 (79)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=6e-14  Score=103.07  Aligned_cols=64  Identities=36%  Similarity=0.700  Sum_probs=49.7

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceec
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC  120 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  120 (434)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|++++||+|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4567777888888887777788887777777777777777777777777777777777777776

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=7.8e-14  Score=107.66  Aligned_cols=69  Identities=17%  Similarity=0.369  Sum_probs=61.5

Q ss_pred             CCCCCCeecCcCCcccCCHHHHHHHHH-hc---cCCCceeccccccccccchHHHch-hhhcCCCCceeccccC
Q psy8251          56 RSESSPWCCRFCNKRMMTKLSLGIHER-IH---TGQRPYICDWCGVGFRSKANLLQH-QPVHTGQRKYNCTVCG  124 (434)
Q Consensus        56 ~~~~~~~~C~~C~~~f~~~~~L~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~  124 (434)
                      ..+++||.|..|++.|...+.|..|++ +|   .+++||.|.+||+.|.....|..| +++|++++||.|.++.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            367889999999999999999999997 58   568899999999999999999999 8999999999998754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.5e-14  Score=107.48  Aligned_cols=79  Identities=19%  Similarity=0.400  Sum_probs=67.1

Q ss_pred             HHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHHHHhccCC----CceeccccccccccchHHHchhhhcCCCCcee
Q psy8251          44 LVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIHTGQ----RPYICDWCGVGFRSKANLLQHQPVHTGQRKYN  119 (434)
Q Consensus        44 L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  119 (434)
                      |.+|++ .|    .++++|.|.+|++.|.....|..|++.|+++    ++|.|.+|++.|.....|..|+++|++++++.
T Consensus         3 ~~~H~~-~H----~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   77 (86)
T 1x6h_A            3 SGSSGR-TH----TGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE   77 (86)
T ss_dssp             TTCCST-TC----CCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred             cccccc-ee----cCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcc
Confidence            345665 45    6788999999999999999999999877765    68999999999999999999999999999999


Q ss_pred             ccccCccc
Q psy8251         120 CTVCGKAF  127 (434)
Q Consensus       120 C~~C~k~F  127 (434)
                      |..|+..|
T Consensus        78 ~~~~~~~~   85 (86)
T 1x6h_A           78 GENSGPSS   85 (86)
T ss_dssp             CCCCCCCC
T ss_pred             cCCCCCCC
Confidence            99998765

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=6.8e-15  Score=113.64  Aligned_cols=76  Identities=20%  Similarity=0.230  Sum_probs=67.9

Q ss_pred             cCCHHHHHHHHHhccCCCceeccccccccc-cchHHHchhhhcCC-CCceeccccCcccCChhHHHhhhccccCCccc
Q psy8251          71 MMTKLSLGIHERIHTGQRPYICDWCGVGFR-SKANLLQHQPVHTG-QRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTG  146 (434)
Q Consensus        71 f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~  146 (434)
                      +.....+..|+++|.++++|.|.+|++.|. ....|..|+++|++ +++|.|.+|++.|.+...|..|+++|+++++.
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            444456778999999999999999999999 99999999999998 89999999999999999999999999998873

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.44  E-value=4.2e-15  Score=121.04  Aligned_cols=113  Identities=15%  Similarity=0.140  Sum_probs=87.5

Q ss_pred             HcCCCCCCCCccchhhh--cCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccC------CHHHHHHHHHhccCCCceec
Q psy8251          21 EHGGNLSFDNCHICKET--FYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMM------TKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        21 ~h~~~~~~~~C~~C~~~--f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~------~~~~L~~H~~~h~~~~~~~C   92 (434)
                      .+.|.++|. |...+..  |.....+..|..      ...++.+.|.+|++.|.      ....|..|+ .|++++||.|
T Consensus         6 ~~~~~k~~~-~~~k~~~~~~s~ee~~~~~~l------~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C   77 (129)
T 2wbt_A            6 VDSGSKKYL-SNHKGIFIHVTLEELKRYHQL------TPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVC   77 (129)
T ss_dssp             CCTTCCGGG-GCSSCEEEECCHHHHHHHTTS------CHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEEC
T ss_pred             hcccccccc-cccCCeeeeecHHhhhccccC------ChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeEC
Confidence            467888887 7664433  333332222221      02345677888877665      667777777 6888999999


Q ss_pred             cccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251          93 DWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus        93 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      .+|++.|.....|..|+++|  ++||.|++|++.|.+...|..|+++|++.
T Consensus        78 ~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           78 PLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            99999999999999999998  88999999999999999999999999985

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.43  E-value=7.5e-14  Score=104.44  Aligned_cols=73  Identities=30%  Similarity=0.564  Sum_probs=39.1

Q ss_pred             cchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCc--CCcccCCHHHHHHHHHhccCCCceeccc---cccccccchHHH
Q psy8251          32 HICKETFYKHSELVRHLEREHNIPRSESSPWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDW---CGVGFRSKANLL  106 (434)
Q Consensus        32 ~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~  106 (434)
                      +.|++.|.+...|..|++ .|    .++++|.|+.  |++.|.+...|..|+++|++   |.|..   |++.|.....|.
T Consensus         7 ~~C~~~f~~~~~l~~H~~-~h----~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQF-SH----TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             TTCCCEESSHHHHHHHHH-HH----HTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHH
T ss_pred             CCCCcccCCHHHHHHHHH-Hh----CCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHH
Confidence            555555555555555554 23    2344555555  55555555555555555554   55555   555555555555


Q ss_pred             chhhhc
Q psy8251         107 QHQPVH  112 (434)
Q Consensus       107 ~H~~~h  112 (434)
                      .|+++|
T Consensus        79 ~H~~~h   84 (85)
T 2j7j_A           79 KHVAEC   84 (85)
T ss_dssp             HHHHHC
T ss_pred             HHHHhc
Confidence            555544

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.2e-13  Score=99.40  Aligned_cols=62  Identities=26%  Similarity=0.518  Sum_probs=44.6

Q ss_pred             ccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251          84 HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus        84 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      |.++++|.|.+|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|+++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            45666677777777777777777777777777777777777777777777777777777665

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=2.4e-13  Score=98.96  Aligned_cols=62  Identities=35%  Similarity=0.805  Sum_probs=38.7

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCce
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY  118 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  118 (434)
                      .++++|.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            34556666666666666666666666666666666666666666666666666666666554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.3e-13  Score=105.79  Aligned_cols=75  Identities=16%  Similarity=0.143  Sum_probs=63.1

Q ss_pred             cccCCHHHHHHHHHhccCCCceecccccccc-ccchHHHchhhhcCCCCceeccccCcccCChhHHHhh-hccccCCc
Q psy8251          69 KRMMTKLSLGIHERIHTGQRPYICDWCGVGF-RSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTH-MRVHTGKL  144 (434)
Q Consensus        69 ~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H-~~~h~~~~  144 (434)
                      ..|.....|..|++.+.++++|.|+.|++.| .....|..|+++| ++++|.|.+|++.|.....|..| +++|+++.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            3566777888888888888889999999999 8888888998888 88889999999999999999999 77777543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.3e-13  Score=99.82  Aligned_cols=63  Identities=48%  Similarity=0.879  Sum_probs=48.4

Q ss_pred             HhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCc
Q psy8251          82 RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKL  144 (434)
Q Consensus        82 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~  144 (434)
                      ++|.++++|.|++|++.|.....|..|+++|.++++|.|++|++.|.+...|..|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            456777777777777777777777777777777777888888888888888888887777654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.37  E-value=2.6e-13  Score=98.79  Aligned_cols=64  Identities=41%  Similarity=0.922  Sum_probs=60.4

Q ss_pred             HhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251          82 RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus        82 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      ..+.++++|.|..|++.|.....|..|+++|.++++|.|++|++.|.....|.+|+++|++++|
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            3567889999999999999999999999999999999999999999999999999999999876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.6e-13  Score=98.83  Aligned_cols=66  Identities=42%  Similarity=0.753  Sum_probs=41.1

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhhhceecccCCcccCChhhHHHHh
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHM  190 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~  190 (434)
                      .+.++++|.|++|++.|.....|..|+++|+++++                  |. |..|      ++.|.....|..|+
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------------~~-C~~C------~~~f~~~~~L~~H~   66 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP------------------YK-CDEC------GKAFIQRSHLIGHH   66 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS------------------EE-CSSS------CCEESSHHHHHHHG
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcC------------------ee-CCCC------CCccCCHHHHHHHH
Confidence            44555666666666666666666666666666655                  33 4333      66666666666666


Q ss_pred             hhccCCCCCCC
Q psy8251         191 RVHTGKLTGKF  201 (434)
Q Consensus       191 ~~H~~~~~~~C  201 (434)
                      ++|++++||.|
T Consensus        67 ~~H~~~~p~~C   77 (77)
T 2cot_A           67 RVHTGSGPSSG   77 (77)
T ss_dssp             GGSCCCCCCCC
T ss_pred             HHhCCCCCCCC
Confidence            66666666655

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.4e-13  Score=106.25  Aligned_cols=79  Identities=16%  Similarity=0.142  Sum_probs=69.9

Q ss_pred             cccccchHHHchhhhcCCCCceeccccCcccC-ChhHHHhhhccccC-Ccccccccccccccccccchhhhhhhhceecc
Q psy8251          97 VGFRSKANLLQHQPVHTGQRKYNCTVCGKAFS-RKSFVTTHMRVHTG-KLTGKFGQKMSALSGTAFAVEYEIIQECLFAK  174 (434)
Q Consensus        97 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~-~~~~L~~H~~~h~~-~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~  174 (434)
                      ..+.....+..|+++|.++++|.|++|++.|. ....|..|+++|++ +++                  |. |..|    
T Consensus         4 ~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~------------------~~-C~~C----   60 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA------------------LK-CQHC----   60 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH------------------HS-CSSS----
T ss_pred             CCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC------------------EE-CCCC----
Confidence            34566677889999999999999999999999 99999999999998 777                  55 6666    


Q ss_pred             cCCcccCChhhHHHHhhhccCCCCCC
Q psy8251         175 NGGKAFSRKSFVTTHMRVHTGKLTGK  200 (434)
Q Consensus       175 ~C~~~F~~~~~L~~H~~~H~~~~~~~  200 (434)
                        ++.|.....|..|+++|+++++..
T Consensus        61 --~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           61 --RKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             --CCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             --CCccCCHHHHHHHHHHHcCCCCCC
Confidence              999999999999999999987744

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.35  E-value=1.3e-13  Score=112.24  Aligned_cols=110  Identities=17%  Similarity=0.211  Sum_probs=85.5

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhc---cCCCceeccccccccc------cchHHHchhhhcCCCCceeccccCccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIH---TGQRPYICDWCGVGFR------SKANLLQHQPVHTGQRKYNCTVCGKAF  127 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h---~~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~k~F  127 (434)
                      .+.++|.|...+.....  .+..+.+.+   ..++.+.|++|++.|.      ....|..|+ .|++++||.|++|++.|
T Consensus         8 ~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f   84 (129)
T 2wbt_A            8 SGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPF   84 (129)
T ss_dssp             TTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEE
T ss_pred             ccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCccc
Confidence            67889988876654322  233343322   3356788999988776      456666666 68999999999999999


Q ss_pred             CChhHHHhhhccccCCcccccccccccccccccchhhhhhhhceecccCCcccCChhhHHHHhhhccCC
Q psy8251         128 SRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVTTHMRVHTGK  196 (434)
Q Consensus       128 ~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~~H~~~H~~~  196 (434)
                      .....|..|+++|  +++                  |. |+.|      ++.|.....|..|+++|+|.
T Consensus        85 ~~~~~l~~H~~~H--~~~------------------~~-C~~C------~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           85 SSSVSLKQHIRYT--EHT------------------KV-CPVC------KKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             SSHHHHHHHHHHT--CCC------------------CB-CTTT------CCBCSSHHHHHHHHHHTTCC
T ss_pred             CCHhHHHHHHHHC--CCC------------------CC-CCCC------CcccCCHHHHHHHHHHHCCc
Confidence            9999999999998  666                  54 6666      99999999999999999985

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=1.2e-13  Score=101.35  Aligned_cols=68  Identities=29%  Similarity=0.574  Sum_probs=55.1

Q ss_pred             HHHHHHhccCCCceeccccccccccchHHHchhh-hcCCC-CceeccccCcccCChhHHHhhhccccCCc
Q psy8251          77 LGIHERIHTGQRPYICDWCGVGFRSKANLLQHQP-VHTGQ-RKYNCTVCGKAFSRKSFVTTHMRVHTGKL  144 (434)
Q Consensus        77 L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~k~F~~~~~L~~H~~~h~~~~  144 (434)
                      |.+|+++|+++++|.|.+|++.|.....|..|++ .|.++ ++|.|++|++.|.+...|..|++.+++..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            3457788888888888888888888888888886 56654 78999999999999999999988766543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=7.3e-13  Score=95.20  Aligned_cols=62  Identities=32%  Similarity=0.599  Sum_probs=47.6

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCce
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY  118 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  118 (434)
                      .++++|.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++|.
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            56677777777777777777777777777777777777777777777777777777777653

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=5.9e-13  Score=102.72  Aligned_cols=73  Identities=18%  Similarity=0.264  Sum_probs=63.6

Q ss_pred             cCCCCCCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCCHHHHHHH-HHhccCCCceeccccc
Q psy8251          22 HGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIH-ERIHTGQRPYICDWCG   96 (434)
Q Consensus        22 h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~C~~C~   96 (434)
                      -.|++||. |++|++.|.....|..|++..|.. ..+++||.|.+|++.|.....|..| +++|++++||.|.++.
T Consensus        13 ~~gekpy~-C~~Cgk~F~~~~~L~~H~r~~H~~-~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYE-CKYCTFQTPDLNMFTFHVDSEHPN-VVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEE-CSSCSCEESCHHHHHHHHHHHCSS-CCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCCcCcC-CCCCCCccCCHHHHHHHHHhhCCC-CCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            35789999 999999999999999999755621 0247899999999999999999999 8999999999999854

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=5.6e-13  Score=99.15  Aligned_cols=59  Identities=22%  Similarity=0.453  Sum_probs=33.7

Q ss_pred             ccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhc-cccC
Q psy8251          84 HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMR-VHTG  142 (434)
Q Consensus        84 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~-~h~~  142 (434)
                      +...++|.|++|++.|.....|..|+++|++++||.|++|++.|.....|.+|++ .|.+
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            3444555566666666666666666666666666666666666666666666643 3443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.34  E-value=3.1e-13  Score=92.87  Aligned_cols=55  Identities=33%  Similarity=0.617  Sum_probs=28.9

Q ss_pred             CCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhcccc
Q psy8251          87 QRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus        87 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      +++|.|++|++.|.+...|..|+++|++++||.|++|++.|.....|..|++.|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3445555555555555555555555555555555555555555555555555544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=3.2e-13  Score=95.85  Aligned_cols=61  Identities=26%  Similarity=0.554  Sum_probs=45.1

Q ss_pred             HhccCCCceeccccccccccchHHHchhhh-c-CCCCceeccccCcccCChhHHHhhhccccC
Q psy8251          82 RIHTGQRPYICDWCGVGFRSKANLLQHQPV-H-TGQRKYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus        82 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      ++|.++++|.|+.|++.|.+...|..|++. | .++++|.|+.|++.|.+.+.|..|++.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            456677777777777777777777777776 5 467777777777777777777777777665

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.30  E-value=1.3e-12  Score=89.67  Aligned_cols=54  Identities=35%  Similarity=0.719  Sum_probs=31.0

Q ss_pred             eeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251          90 YICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus        90 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      |.|.+|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|+++|+++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            455555555555555555555555555555555666665555666665555544

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.5e-12  Score=99.74  Aligned_cols=79  Identities=15%  Similarity=0.169  Sum_probs=69.4

Q ss_pred             ccccccchHHHchhhhcCCCCceeccccCccc-CChhHHHhhhccccCCcccccccccccccccccchhhhhhhhceecc
Q psy8251          96 GVGFRSKANLLQHQPVHTGQRKYNCTVCGKAF-SRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAK  174 (434)
Q Consensus        96 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F-~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~  174 (434)
                      ...|.....|..|++.|.++++|.|+.|++.| .+...|..|+++| ++++                  |. |..|    
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~------------------~~-C~~C----   68 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM------------------FT-CHHC----   68 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCC------------------CC-CSSS----
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC------------------eE-CCCC----
Confidence            34677888999999999999999999999999 9999999999999 9888                  55 6666    


Q ss_pred             cCCcccCChhhHHHH-hhhccCCCCCC
Q psy8251         175 NGGKAFSRKSFVTTH-MRVHTGKLTGK  200 (434)
Q Consensus       175 ~C~~~F~~~~~L~~H-~~~H~~~~~~~  200 (434)
                        ++.|.....|..| +++|+++..+.
T Consensus        69 --gk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           69 --GKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             --CCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             --CCeeCCHHHHHHHhHHhcCCCCCCC
Confidence              9999999999999 88998765443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.5e-12  Score=94.13  Aligned_cols=66  Identities=47%  Similarity=0.863  Sum_probs=59.2

Q ss_pred             hhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhhhceecccCCcccCChhhHH
Q psy8251         108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFVT  187 (434)
Q Consensus       108 H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L~  187 (434)
                      +.++|.++++|.|++|++.|.....|..|+++|+++++                  |. |..|      ++.|.....|.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~------------------~~-C~~C------~~~f~~~~~L~   59 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP------------------YK-CLEC------GKAFSQNSGLI   59 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC------------------EE-CSSS------CCEESSHHHHH
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC------------------eE-CCCC------CcccCCHHHHH
Confidence            45789999999999999999999999999999999988                  54 5555      99999999999


Q ss_pred             HHhhhccCCCC
Q psy8251         188 THMRVHTGKLT  198 (434)
Q Consensus       188 ~H~~~H~~~~~  198 (434)
                      .|+++|+++..
T Consensus        60 ~H~~~H~~~~~   70 (72)
T 1x6e_A           60 NHQRIHTSGPS   70 (72)
T ss_dssp             HHHHHHHSSSS
T ss_pred             HHHHhcCCCCC
Confidence            99999998643

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.29  E-value=2.8e-12  Score=95.34  Aligned_cols=60  Identities=20%  Similarity=0.438  Sum_probs=52.2

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchh-hhcCCCC
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQ-PVHTGQR  116 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  116 (434)
                      ...++|.|++|++.|.....|..|+++|++++||.|.+|++.|.....|..|+ +.|.++.
T Consensus        24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           24 ASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            35678999999999999999999999999999999999999999999999996 5677663

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.29  E-value=1.6e-12  Score=89.22  Aligned_cols=55  Identities=36%  Similarity=0.696  Sum_probs=33.7

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcC
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHT  113 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  113 (434)
                      +++|.|..|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3456666666666666666666666666666666666666666666666666554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.27  E-value=3.2e-12  Score=87.63  Aligned_cols=55  Identities=33%  Similarity=0.635  Sum_probs=32.9

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCC
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQ  115 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  115 (434)
                      ||.|..|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            3556666666666666666666666666666666666666666666666655554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.6e-12  Score=94.41  Aligned_cols=62  Identities=32%  Similarity=0.610  Sum_probs=42.9

Q ss_pred             ccCCCceeccccccccccchHHHchhhhcCC---CCceeccccCcccCChhHHHhhhc-cccCCcc
Q psy8251          84 HTGQRPYICDWCGVGFRSKANLLQHQPVHTG---QRKYNCTVCGKAFSRKSFVTTHMR-VHTGKLT  145 (434)
Q Consensus        84 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~k~F~~~~~L~~H~~-~h~~~~~  145 (434)
                      |+++++|.|.+|++.|.....|..|+++|++   +++|.|++|++.|.....|..|++ .|.++.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5566667777777777777777777766664   677888888888888888888874 4444443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=2.9e-12  Score=93.94  Aligned_cols=68  Identities=22%  Similarity=0.482  Sum_probs=58.3

Q ss_pred             HHHchhhhcCCCCceeccccCcccCChhHHHhhhc-cccCC-cccccccccccccccccchhhhhhhhceecccCCcccC
Q psy8251         104 NLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMR-VHTGK-LTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFS  181 (434)
Q Consensus       104 ~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~-~h~~~-~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~  181 (434)
                      +|..|+++|.+++||.|++|++.|.+...|..|++ .|.++ ++                  |. |+.|      ++.|.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~------------------~~-C~~C------~~~f~   56 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK------------------FH-CPHC------DTVIA   56 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSS------------------EE-CSSS------SCEES
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCc------------------cC-CCCC------CCccC
Confidence            46789999999999999999999999999999997 56654 56                  44 5555      99999


Q ss_pred             ChhhHHHHhhhccCC
Q psy8251         182 RKSFVTTHMRVHTGK  196 (434)
Q Consensus       182 ~~~~L~~H~~~H~~~  196 (434)
                      ....|..|+++|++.
T Consensus        57 ~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           57 RKSDLGVHLRKQHSY   71 (77)
T ss_dssp             SHHHHHHHHHHTSCC
T ss_pred             CHHHHHHHHHHhCCC
Confidence            999999999986654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=5.2e-14  Score=102.05  Aligned_cols=63  Identities=27%  Similarity=0.503  Sum_probs=40.4

Q ss_pred             HHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251          76 SLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus        76 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .|..|+++|.++++|.|.+|++.|.....|..       +++|.|++|++.|.....|..|+++|+++++
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC
Confidence            34556666666666666666666666665554       5566666666666666666666666666665

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=5.3e-12  Score=87.55  Aligned_cols=54  Identities=30%  Similarity=0.847  Sum_probs=33.0

Q ss_pred             ceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhh-ccccC
Q psy8251          89 PYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHM-RVHTG  142 (434)
Q Consensus        89 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~-~~h~~  142 (434)
                      ||.|.+|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|+ +.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            4556666666666666666666666666666666666666666666664 45544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.7e-11  Score=85.00  Aligned_cols=55  Identities=29%  Similarity=0.732  Sum_probs=37.3

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchh-hhcCCC
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQ-PVHTGQ  115 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  115 (434)
                      ||.|..|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+ +.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5667777777777777777777777667777777777777777777774 455543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=8.5e-12  Score=90.31  Aligned_cols=56  Identities=34%  Similarity=0.694  Sum_probs=28.6

Q ss_pred             CCCCCeecC--cCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhc
Q psy8251          57 SESSPWCCR--FCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVH  112 (434)
Q Consensus        57 ~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  112 (434)
                      .++++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|
T Consensus        15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           15 PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            344555554  35555555555555555555555555555555555555555554444

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=1.2e-11  Score=89.53  Aligned_cols=59  Identities=39%  Similarity=0.823  Sum_probs=55.9

Q ss_pred             hccCCCceecc--ccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhcccc
Q psy8251          83 IHTGQRPYICD--WCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus        83 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      ++.++++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|.....|.+|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            57788999997  599999999999999999999999999999999999999999999874

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=1.1e-11  Score=87.67  Aligned_cols=62  Identities=26%  Similarity=0.511  Sum_probs=54.3

Q ss_pred             hhhcCCCCceeccccCcccCChhHHHhhhcc-c-cCCcccccccccccccccccchhhhhhhhceecccCCcccCChhhH
Q psy8251         109 QPVHTGQRKYNCTVCGKAFSRKSFVTTHMRV-H-TGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKSFV  186 (434)
Q Consensus       109 ~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~-h-~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~~L  186 (434)
                      +++|.+++||.|+.|++.|.+...|..|++. | .++++                  |. |+.|      ++.|...+.|
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~------------------~~-C~~C------~k~f~~~~~L   56 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV------------------YP-CPFC------FKEFTRKDNM   56 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC------------------EE-CTTT------CCEESCHHHH
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcC------------------eE-CCCC------CCccCCHHHH
Confidence            3578899999999999999999999999998 6 47777                  54 6666      9999999999


Q ss_pred             HHHhhhccC
Q psy8251         187 TTHMRVHTG  195 (434)
Q Consensus       187 ~~H~~~H~~  195 (434)
                      ..|+++|++
T Consensus        57 ~~H~~~~H~   65 (66)
T 2drp_A           57 TAHVKIIHK   65 (66)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHcC
Confidence            999999886

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=3e-11  Score=88.67  Aligned_cols=62  Identities=27%  Similarity=0.471  Sum_probs=40.2

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccC---CCceeccccccccccchHHHchh-hhcCCCCce
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTG---QRPYICDWCGVGFRSKANLLQHQ-PVHTGQRKY  118 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~  118 (434)
                      +++++|.|.+|++.|.....|..|+++|++   +++|.|.+|++.|.....|..|+ +.|.++++.
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            456667777777777766677777666664   56677777777777777777776 344444443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=2.8e-11  Score=92.45  Aligned_cols=60  Identities=27%  Similarity=0.407  Sum_probs=36.9

Q ss_pred             eecCcCCcccCCHHHHHHHHHh-ccCCCc--------eeccccccccccchHHHchhhhcCCCCceecc
Q psy8251          62 WCCRFCNKRMMTKLSLGIHERI-HTGQRP--------YICDWCGVGFRSKANLLQHQPVHTGQRKYNCT  121 (434)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  121 (434)
                      |.|..|++.|.....|..|+++ |.++++        |.|.+|++.|.....|..|+++|++++||.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4566666666666666666665 555555        56666666666666666666666666666654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=2.8e-11  Score=85.74  Aligned_cols=54  Identities=22%  Similarity=0.432  Sum_probs=27.6

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceecc-ccccccccchHHHchhhhcCC
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICD-WCGVGFRSKANLLQHQPVHTG  114 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~  114 (434)
                      +++|.|..|++.|. ...|..|+++ ++++||.|+ .|++.|.....|..|+++|..
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            44555555555555 5555555555 455555555 555555555555555544443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.9e-12  Score=92.70  Aligned_cols=70  Identities=24%  Similarity=0.384  Sum_probs=62.2

Q ss_pred             cchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhhhceecccCCccc
Q psy8251         101 SKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAF  180 (434)
Q Consensus       101 ~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F  180 (434)
                      +...|..|+++|.++++|.|++|++.|.+...|..       +++                  |. |+.|      ++.|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~------------------~~-C~~C------~~~f   49 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKT------------------PM-CEKC------RKDS   49 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSS------------------CC-CHHH------HHTC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCC------------------CC-CCCC------Chhh
Confidence            35678899999999999999999999999988876       444                  55 7777      9999


Q ss_pred             CChhhHHHHhhhccCCCCCCCc
Q psy8251         181 SRKSFVTTHMRVHTGKLTGKFG  202 (434)
Q Consensus       181 ~~~~~L~~H~~~H~~~~~~~C~  202 (434)
                      .....|..|+++|+++++|.|.
T Consensus        50 ~~~~~l~~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A           50 CQEAALNKDEGNESGKKTSGPS   71 (73)
T ss_dssp             SCCCSSCCCSSCCCCCCCSSCC
T ss_pred             cCHHHHHHHHHhhcCCCCCCCC
Confidence            9999999999999999999985

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.08  E-value=1.1e-10  Score=89.12  Aligned_cols=62  Identities=31%  Similarity=0.352  Sum_probs=54.6

Q ss_pred             CCCCccchhhhcCCHHHHHHHHHhhcCCCCCCCCC--------eecCcCCcccCCHHHHHHHHHhccCCCceecc
Q psy8251          27 SFDNCHICKETFYKHSELVRHLEREHNIPRSESSP--------WCCRFCNKRMMTKLSLGIHERIHTGQRPYICD   93 (434)
Q Consensus        27 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   93 (434)
                      .+. |+.|++.|.....|..|++.+|    .++++        |.|..|++.|.....|..|+++|++++||.|+
T Consensus        25 ~~~-C~~C~k~f~~~~~L~~H~~~~H----~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRP-KKSCDRTFSTMHELVTHVTMEH----VGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSS-CCCCCCCCSSHHHHHHHHHHTT----TCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCc-ccccccccCCHHHHHHHHHHhc----cCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455 9999999999999999998546    45555        89999999999999999999999999999986

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=8.9e-11  Score=83.07  Aligned_cols=59  Identities=19%  Similarity=0.366  Sum_probs=52.8

Q ss_pred             cCCCceeccccccccccchHHHchhhhcCCCCceecc-ccCcccCChhHHHhhhccccCCcc
Q psy8251          85 TGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCT-VCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus        85 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .++++|.|..|++.|. ...|..|+++ .+++||.|+ .|++.|..++.|..|+++|.+.++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4678899999999999 9999999998 999999999 999999999999999999877654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.02  E-value=2.9e-10  Score=73.96  Aligned_cols=42  Identities=24%  Similarity=0.559  Sum_probs=38.5

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCC------SSCSCCCC
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.9e-11  Score=77.34  Aligned_cols=44  Identities=30%  Similarity=0.517  Sum_probs=23.3

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.00  E-value=3.1e-10  Score=73.83  Aligned_cols=42  Identities=26%  Similarity=0.661  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSC------CCSSCCCC
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.4e-10  Score=73.54  Aligned_cols=42  Identities=21%  Similarity=0.548  Sum_probs=38.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.++|.+|+++|+++      +||.|..|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEE------KPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSS------CSCSCCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999988      67888765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=6.8e-11  Score=77.03  Aligned_cols=44  Identities=30%  Similarity=0.613  Sum_probs=24.4

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3e-10  Score=73.91  Aligned_cols=42  Identities=19%  Similarity=0.513  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGE------KTSGPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSC------CCCCSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCC------CCCCCCCC
Confidence            4699999999999999999999999999999987      68888765

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8e-11  Score=76.68  Aligned_cols=44  Identities=32%  Similarity=0.628  Sum_probs=32.9

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777766

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=6.8e-11  Score=77.01  Aligned_cols=44  Identities=30%  Similarity=0.614  Sum_probs=20.9

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3e-10  Score=73.89  Aligned_cols=42  Identities=33%  Similarity=0.664  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCC------CCCSCCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.99  E-value=6.9e-11  Score=76.96  Aligned_cols=44  Identities=32%  Similarity=0.506  Sum_probs=23.2

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=6.6e-11  Score=77.09  Aligned_cols=44  Identities=34%  Similarity=0.637  Sum_probs=21.7

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            33444444555555555555555555555555555555555444

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.3e-10  Score=73.68  Aligned_cols=42  Identities=21%  Similarity=0.545  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+..+|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGE------KPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSS------SCCCCCCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.4e-10  Score=73.60  Aligned_cols=42  Identities=26%  Similarity=0.598  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTC------CCCSSCCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3e-10  Score=73.86  Aligned_cols=42  Identities=26%  Similarity=0.583  Sum_probs=38.5

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCC------CTTSSSCC
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888875

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1e-10  Score=76.19  Aligned_cols=44  Identities=30%  Similarity=0.606  Sum_probs=25.7

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555556666666666555556666555555555655554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=5.8e-11  Score=76.53  Aligned_cols=39  Identities=26%  Similarity=0.446  Sum_probs=20.0

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            6 SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344455555555555555555555555555555555443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.4e-11  Score=76.81  Aligned_cols=44  Identities=32%  Similarity=0.599  Sum_probs=21.2

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.8e-10  Score=73.40  Aligned_cols=42  Identities=26%  Similarity=0.652  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAE------KPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCC------CSSSCCCC
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.98  E-value=7.2e-11  Score=76.89  Aligned_cols=43  Identities=33%  Similarity=0.577  Sum_probs=20.1

Q ss_pred             HHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          81 ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        81 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      +++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444444444444444444444444444444444444443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.98  E-value=6.9e-11  Score=77.00  Aligned_cols=44  Identities=30%  Similarity=0.590  Sum_probs=25.3

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3e-10  Score=73.85  Aligned_cols=42  Identities=26%  Similarity=0.667  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGK------KPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSC------CCSCSSCC
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCC------CCCCCCCC
Confidence            4699999999999999999999999999999987      68888765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.98  E-value=7.3e-11  Score=76.87  Aligned_cols=44  Identities=23%  Similarity=0.429  Sum_probs=22.4

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            34444555555555555555555555555555555555555444

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.98  E-value=3.4e-10  Score=73.63  Aligned_cols=42  Identities=21%  Similarity=0.471  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGE------KPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSS------SCSCSSCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCC------CCcCCCCC
Confidence            4599999999999999999999999999999988      68888765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4e-10  Score=73.24  Aligned_cols=42  Identities=26%  Similarity=0.546  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGE------RHSGPSSG   46 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCC------SSCCSCCC
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.5e-10  Score=73.56  Aligned_cols=42  Identities=24%  Similarity=0.552  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGE------KPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCS------CSSCCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.4e-10  Score=73.65  Aligned_cols=42  Identities=21%  Similarity=0.556  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQ------RPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSC------CCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999988      68888765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.5e-11  Score=76.79  Aligned_cols=43  Identities=35%  Similarity=0.655  Sum_probs=21.2

Q ss_pred             HHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          81 ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        81 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      +++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444455555555555555555555555555555555444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.98  E-value=4.5e-11  Score=77.89  Aligned_cols=39  Identities=28%  Similarity=0.507  Sum_probs=19.1

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      .++++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            8 TGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344445555555555555555555555555455544443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.3e-11  Score=76.86  Aligned_cols=43  Identities=28%  Similarity=0.552  Sum_probs=19.2

Q ss_pred             HHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          81 ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        81 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      +++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=8.3e-11  Score=76.60  Aligned_cols=44  Identities=34%  Similarity=0.650  Sum_probs=20.5

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=8.4e-11  Score=76.59  Aligned_cols=44  Identities=30%  Similarity=0.566  Sum_probs=23.2

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.98  E-value=8.9e-11  Score=76.42  Aligned_cols=44  Identities=36%  Similarity=0.652  Sum_probs=24.1

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=8.4e-11  Score=76.56  Aligned_cols=44  Identities=34%  Similarity=0.677  Sum_probs=22.7

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.6e-10  Score=73.49  Aligned_cols=42  Identities=29%  Similarity=0.706  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTC------SCCCSCCC
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.98  E-value=3.1e-10  Score=81.71  Aligned_cols=54  Identities=30%  Similarity=0.714  Sum_probs=30.8

Q ss_pred             CCCCeecCc--CCcccCCHHHHHHHHHhccCCCceeccc--cccccccchHHHchhhh
Q psy8251          58 ESSPWCCRF--CNKRMMTKLSLGIHERIHTGQRPYICDW--CGVGFRSKANLLQHQPV  111 (434)
Q Consensus        58 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~  111 (434)
                      ..++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            345566655  6666666666666666665555555543  55555555555555544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.6e-11  Score=76.27  Aligned_cols=44  Identities=34%  Similarity=0.773  Sum_probs=21.1

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=8.6e-11  Score=76.52  Aligned_cols=43  Identities=37%  Similarity=0.717  Sum_probs=19.8

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTV  122 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  122 (434)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444444

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6.9e-11  Score=76.96  Aligned_cols=38  Identities=32%  Similarity=0.489  Sum_probs=17.5

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            9 GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3e-10  Score=73.92  Aligned_cols=42  Identities=26%  Similarity=0.564  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|..|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFRE------KSSGPSSG   46 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHST------TSSCCSCC
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCC------CCCCCCCC
Confidence            4699999999999999999999999999999987      67888765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.2e-10  Score=73.75  Aligned_cols=42  Identities=24%  Similarity=0.598  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTS------CCSCSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.3e-10  Score=73.68  Aligned_cols=42  Identities=24%  Similarity=0.522  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCC------SCCSCCCC
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4699999999999999999999999999999987      68888765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=8.2e-11  Score=76.62  Aligned_cols=44  Identities=30%  Similarity=0.539  Sum_probs=21.9

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444445555555555555555555555555555555555444

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=7.8e-11  Score=76.74  Aligned_cols=44  Identities=30%  Similarity=0.489  Sum_probs=20.6

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.1e-10  Score=73.80  Aligned_cols=42  Identities=26%  Similarity=0.570  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGE------KPSGPSSG   46 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTC------CCSSTTCC
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.9e-10  Score=73.27  Aligned_cols=42  Identities=19%  Similarity=0.453  Sum_probs=38.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      ++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDD------KHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSC------CCSCCCCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      67888765

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4e-10  Score=73.25  Aligned_cols=42  Identities=19%  Similarity=0.487  Sum_probs=38.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGE------NPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTS------CCSCCCCC
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.2e-10  Score=73.73  Aligned_cols=42  Identities=26%  Similarity=0.631  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCC------CCCSCCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=8.5e-11  Score=76.51  Aligned_cols=44  Identities=30%  Similarity=0.521  Sum_probs=21.9

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444445555555555555555555555555555555555444

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.3e-11  Score=76.88  Aligned_cols=38  Identities=32%  Similarity=0.459  Sum_probs=18.1

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.5e-11  Score=76.81  Aligned_cols=39  Identities=28%  Similarity=0.488  Sum_probs=19.0

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            8 TGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            344445555555555555555555555544444444443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=9.3e-11  Score=76.34  Aligned_cols=44  Identities=27%  Similarity=0.474  Sum_probs=22.9

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.3e-10  Score=73.62  Aligned_cols=42  Identities=29%  Similarity=0.627  Sum_probs=38.5

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGV------KPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCC------CSCSSCCC
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.2e-10  Score=73.74  Aligned_cols=42  Identities=33%  Similarity=0.710  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGG------KPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSC------CCSCSCCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999988      68888765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=9e-11  Score=76.43  Aligned_cols=43  Identities=30%  Similarity=0.587  Sum_probs=20.2

Q ss_pred             HHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          81 ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        81 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      +++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            4 GSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=8.7e-11  Score=76.50  Aligned_cols=44  Identities=43%  Similarity=0.710  Sum_probs=22.6

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.96  E-value=3.9e-10  Score=73.32  Aligned_cols=42  Identities=21%  Similarity=0.437  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTRE------KPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCS------SCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6.8e-11  Score=77.02  Aligned_cols=43  Identities=40%  Similarity=0.804  Sum_probs=19.0

Q ss_pred             HHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          81 ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        81 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      +++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            4 GSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444433

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=3.6e-10  Score=73.13  Aligned_cols=42  Identities=26%  Similarity=0.579  Sum_probs=39.0

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCCC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKTD  352 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~~  352 (434)
                      .|++++||.|++||+.|.+...|.+|+++|+++      ++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~------~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS------VGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCC------CCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCC------CCCCCcCCC
Confidence            499999999999999999999999999999987      788888875

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=8.7e-11  Score=76.48  Aligned_cols=44  Identities=32%  Similarity=0.650  Sum_probs=22.5

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555444

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.1e-11  Score=76.91  Aligned_cols=38  Identities=32%  Similarity=0.479  Sum_probs=18.3

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            9 GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=9.5e-11  Score=76.28  Aligned_cols=44  Identities=27%  Similarity=0.415  Sum_probs=22.3

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444555555555555555555555555555555555555444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=8.8e-11  Score=76.46  Aligned_cols=38  Identities=32%  Similarity=0.447  Sum_probs=18.0

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            9 GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.4e-11  Score=76.82  Aligned_cols=44  Identities=32%  Similarity=0.602  Sum_probs=25.4

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.96  E-value=3.9e-10  Score=73.32  Aligned_cols=42  Identities=24%  Similarity=0.587  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~c   46 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCC------CCCSSSCC
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.8e-10  Score=73.37  Aligned_cols=42  Identities=24%  Similarity=0.570  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTRE------KPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHC------CCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999988      68888765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=8.9e-11  Score=76.45  Aligned_cols=38  Identities=34%  Similarity=0.507  Sum_probs=18.1

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            9 GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.1e-10  Score=73.83  Aligned_cols=42  Identities=24%  Similarity=0.533  Sum_probs=38.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~c   46 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCS------SCSCCCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.6e-10  Score=73.51  Aligned_cols=42  Identities=33%  Similarity=0.678  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+...|.+|+++|+++      +||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~c   46 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCS------SCSSSCCC
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.7e-10  Score=73.45  Aligned_cols=42  Identities=21%  Similarity=0.470  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGE------KLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCC------CCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.9e-10  Score=73.31  Aligned_cols=42  Identities=21%  Similarity=0.566  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGE------KPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCS------SCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=4.2e-10  Score=73.17  Aligned_cols=42  Identities=19%  Similarity=0.300  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQ------KNSGPSSG   46 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCC------SCCCTTCC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4699999999999999999999999999999987      68888765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.1e-11  Score=76.95  Aligned_cols=38  Identities=18%  Similarity=0.195  Sum_probs=17.8

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|++|++.|...+.|..|+++|+++++|.|+.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            9 GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.2e-10  Score=73.18  Aligned_cols=42  Identities=29%  Similarity=0.610  Sum_probs=38.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~c   46 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQ------KPSGPSSG   46 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCC------CCSSCSCC
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.3e-10  Score=73.14  Aligned_cols=42  Identities=24%  Similarity=0.618  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGY------RPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCC------CSSCSSCC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.96  E-value=1.9e-11  Score=85.41  Aligned_cols=54  Identities=17%  Similarity=0.313  Sum_probs=39.7

Q ss_pred             HHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHH
Q psy8251          78 GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVT  134 (434)
Q Consensus        78 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~  134 (434)
                      ..|+++|++++||.|+.|++.|.....|.   ++|.+++||.|+.|++.|....++.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            34667777777888888888887777665   6777778888888888877665544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.2e-10  Score=73.14  Aligned_cols=42  Identities=26%  Similarity=0.689  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~c   46 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSC------CSCCSCCC
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.1e-10  Score=73.23  Aligned_cols=42  Identities=29%  Similarity=0.631  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSS------SCSSCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.5e-10  Score=72.99  Aligned_cols=42  Identities=29%  Similarity=0.651  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCC------SCCSSCCC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=8.5e-11  Score=76.55  Aligned_cols=39  Identities=23%  Similarity=0.452  Sum_probs=19.6

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      .++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            8 TGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344455555555555555555555555555555555443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.7e-10  Score=73.40  Aligned_cols=42  Identities=26%  Similarity=0.603  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~c   46 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCC------CCSCCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.7e-10  Score=73.45  Aligned_cols=42  Identities=21%  Similarity=0.490  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.++|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCS------CCSSCCCC
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.1e-10  Score=75.98  Aligned_cols=38  Identities=24%  Similarity=0.295  Sum_probs=18.1

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            9 REKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.1e-10  Score=75.96  Aligned_cols=39  Identities=28%  Similarity=0.429  Sum_probs=18.8

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            8 SGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344444444444444444444444444444444444443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.95  E-value=4.3e-10  Score=73.11  Aligned_cols=42  Identities=24%  Similarity=0.604  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGE------KPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSC------CCCSTTCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1e-10  Score=76.13  Aligned_cols=38  Identities=32%  Similarity=0.524  Sum_probs=18.0

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.8e-10  Score=73.39  Aligned_cols=42  Identities=26%  Similarity=0.639  Sum_probs=38.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSC------CCSSSCCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.94  E-value=1.4e-10  Score=75.46  Aligned_cols=42  Identities=31%  Similarity=0.518  Sum_probs=18.7

Q ss_pred             HhccCCCceeccccccccccchHHHchhhhcCCCCceecccc
Q psy8251          82 RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVC  123 (434)
Q Consensus        82 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  123 (434)
                      ++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=4.3e-10  Score=73.09  Aligned_cols=42  Identities=21%  Similarity=0.445  Sum_probs=38.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGE------KCSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCS------CSSCCSCC
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=75.63  Aligned_cols=43  Identities=35%  Similarity=0.719  Sum_probs=20.4

Q ss_pred             HHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccc
Q psy8251          80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTV  122 (434)
Q Consensus        80 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  122 (434)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=3.2e-10  Score=76.59  Aligned_cols=45  Identities=31%  Similarity=0.503  Sum_probs=29.5

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHH-hccCCCceecccccccccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHER-IHTGQRPYICDWCGVGFRS  101 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~  101 (434)
                      .++++|.|.+|++.|.....|..|++ +|.++++|.|.+|++.|.+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            45566666666666666666666665 6666666666666666654

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.94  E-value=9.4e-10  Score=79.11  Aligned_cols=57  Identities=30%  Similarity=0.694  Sum_probs=48.6

Q ss_pred             ccCCCceeccc--cccccccchHHHchhhhcCCCCceeccc--cCcccCChhHHHhhhccc
Q psy8251          84 HTGQRPYICDW--CGVGFRSKANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus        84 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~k~F~~~~~L~~H~~~h  140 (434)
                      ....++|.|..  |++.|.....|..|+++|++++||.|++  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45567889988  9999999999999999999999999965  999999999999998775

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=9.7e-11  Score=76.30  Aligned_cols=38  Identities=34%  Similarity=0.477  Sum_probs=18.3

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            9 GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.6e-10  Score=73.51  Aligned_cols=42  Identities=21%  Similarity=0.574  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~C   46 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGE------RPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSC------CSSCCSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      68888765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5.2e-10  Score=72.71  Aligned_cols=42  Identities=29%  Similarity=0.616  Sum_probs=37.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~~   46 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTS------CCCCTTCC
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCC------CCCCCCCC
Confidence            4699999999999999999999999999999987      67888754

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.1e-10  Score=72.38  Aligned_cols=42  Identities=26%  Similarity=0.585  Sum_probs=38.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++|++.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSS------CCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCC------CCCCCCCC
Confidence            3599999999999999999999999999999987      68888765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=8e-10  Score=72.13  Aligned_cols=42  Identities=29%  Similarity=0.574  Sum_probs=38.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHH-hhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRK-KHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||++|.+.+.|.+|++ +|.++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~------k~~~C~~C   47 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE------KPSGPSSG   47 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTS------CSSSCCCC
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhHhhcCCC------CCCCCCCC
Confidence            46999999999999999999999999999 99887      67888765

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.92  E-value=5.7e-10  Score=72.50  Aligned_cols=39  Identities=38%  Similarity=0.627  Sum_probs=37.7

Q ss_pred             chhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       107 ~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|+++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            588999999999999999999999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.3e-10  Score=75.61  Aligned_cols=39  Identities=31%  Similarity=0.507  Sum_probs=20.5

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      .++++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            8 SGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            344555555555555555555555555555555555444

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=8.2e-10  Score=71.78  Aligned_cols=42  Identities=24%  Similarity=0.534  Sum_probs=37.8

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~~   46 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCC------CSSCSSCC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            4599999999999999999999999999999987      67888753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.90  E-value=7.9e-10  Score=70.26  Aligned_cols=40  Identities=20%  Similarity=0.562  Sum_probs=36.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|.
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~   42 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGE------SGPSSG   42 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCC------CSCCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCC------CCCCCC
Confidence            4599999999999999999999999999999988      567663

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.9e-10  Score=75.19  Aligned_cols=43  Identities=30%  Similarity=0.556  Sum_probs=20.0

Q ss_pred             HHhccCCCceeccccccccccchHHHchhh-hcCCCCceecccc
Q psy8251          81 ERIHTGQRPYICDWCGVGFRSKANLLQHQP-VHTGQRKYNCTVC  123 (434)
Q Consensus        81 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  123 (434)
                      +++|.++++|.|.+|++.|.....|..|++ +|.+++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            334444444444444444444444444444 4444444444443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.1e-09  Score=69.53  Aligned_cols=39  Identities=21%  Similarity=0.503  Sum_probs=35.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAY  348 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c  348 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVK------SGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCC------SSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCC------CCCCC
Confidence            4599999999999999999999999999999987      56666

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.3e-09  Score=70.87  Aligned_cols=41  Identities=22%  Similarity=0.652  Sum_probs=37.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      ++|.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGE------RSSGPSS   45 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSC------CSCSTTC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777764

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.5e-10  Score=72.22  Aligned_cols=39  Identities=33%  Similarity=0.733  Sum_probs=37.7

Q ss_pred             chhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       107 ~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP   40 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            688999999999999999999999999999999999998

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.3e-10  Score=74.43  Aligned_cols=36  Identities=33%  Similarity=0.636  Sum_probs=16.8

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICD   93 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   93 (434)
                      ++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            9 GEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444444444444444444444444444444

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.2e-09  Score=70.94  Aligned_cols=41  Identities=34%  Similarity=0.695  Sum_probs=37.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2enf_A            5 SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTS------SCCCCSC
T ss_pred             cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6777764

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.6e-10  Score=72.20  Aligned_cols=39  Identities=33%  Similarity=0.748  Sum_probs=37.6

Q ss_pred             chhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       107 ~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .|+++|+++++|.|++|++.|.....|..|+++|+++++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            588999999999999999999999999999999999998

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.1e-09  Score=71.15  Aligned_cols=41  Identities=29%  Similarity=0.630  Sum_probs=37.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSS------SCCCCCC
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6777764

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1e-09  Score=71.26  Aligned_cols=41  Identities=24%  Similarity=0.581  Sum_probs=37.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGE------KPSGPSS   45 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCC------CCCSSCC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777764

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=9.9e-10  Score=71.39  Aligned_cols=41  Identities=24%  Similarity=0.646  Sum_probs=37.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGE------RPSGPSS   45 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSC------CSCTTSC
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6787764

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=1.6e-09  Score=73.16  Aligned_cols=47  Identities=36%  Similarity=0.601  Sum_probs=38.2

Q ss_pred             hccCCCceeccccccccccchHHHchhh-hcCCCCceeccccCcccCC
Q psy8251          83 IHTGQRPYICDWCGVGFRSKANLLQHQP-VHTGQRKYNCTVCGKAFSR  129 (434)
Q Consensus        83 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~k~F~~  129 (434)
                      .|.++++|.|.+|++.|.....|..|++ +|.+++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3567788888888888888888888876 7888888888888888865

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.7e-09  Score=70.18  Aligned_cols=41  Identities=22%  Similarity=0.631  Sum_probs=37.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGE------NPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSS------CCCSSSC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6777764

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.4e-09  Score=70.59  Aligned_cols=41  Identities=34%  Similarity=0.707  Sum_probs=37.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCS------CCSSTTC
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777764

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.88  E-value=1.2e-09  Score=70.97  Aligned_cols=41  Identities=22%  Similarity=0.630  Sum_probs=37.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTS------CSSSSCC
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.8e-09  Score=70.17  Aligned_cols=41  Identities=29%  Similarity=0.560  Sum_probs=37.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++|++.|.+...|.+|+++|+++      +||.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSC------CCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6777754

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.87  E-value=1.6e-09  Score=69.21  Aligned_cols=39  Identities=18%  Similarity=0.540  Sum_probs=35.9

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      .|++++||.|+.||+.|.+...|.+|+++|+++      +||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSD------KSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCT------TCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCC------CCccCC
Confidence            589999999999999999999999999999988      677775

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.7e-09  Score=70.28  Aligned_cols=41  Identities=22%  Similarity=0.499  Sum_probs=37.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGE------KPSGPSS   45 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSS------CCCSCCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6777764

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.5e-09  Score=70.53  Aligned_cols=41  Identities=29%  Similarity=0.718  Sum_probs=37.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||++|.+...|.+|+++|.++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGE------KPSGPSS   45 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCC------CCCCCCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777764

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.4e-09  Score=70.68  Aligned_cols=41  Identities=32%  Similarity=0.720  Sum_probs=37.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~------~~~~C~~   45 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCC------CCCCSCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777764

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.6e-09  Score=70.37  Aligned_cols=41  Identities=27%  Similarity=0.709  Sum_probs=36.7

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCS------CCCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777753

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.5e-09  Score=70.41  Aligned_cols=41  Identities=24%  Similarity=0.544  Sum_probs=36.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~   45 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGE------RPSGPSS   45 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCC------CCSCSCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4589999999999999999999999999999988      6777764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-09  Score=70.47  Aligned_cols=41  Identities=27%  Similarity=0.596  Sum_probs=36.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGE------KPSGPSS   45 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSC------CCCSCCC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCC------CCCCCCC
Confidence            4699999999999999999999999999999988      6777754

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-09  Score=70.44  Aligned_cols=41  Identities=22%  Similarity=0.554  Sum_probs=36.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++|++.|.+...|.+|+++|+++      ++|.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSRE------KSSGPSS   45 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHT------TCCCSCC
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      5777753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.4e-09  Score=70.54  Aligned_cols=41  Identities=24%  Similarity=0.618  Sum_probs=37.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGE------KPSGPSS   45 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCC------SCSCTTC
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6777764

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.7e-09  Score=70.17  Aligned_cols=41  Identities=27%  Similarity=0.707  Sum_probs=36.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGE------KPSGPSS   45 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTC------CCSSCCC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777764

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.4e-09  Score=70.52  Aligned_cols=41  Identities=24%  Similarity=0.683  Sum_probs=37.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------kp~~C~~   45 (46)
T 2eor_A            5 SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGE------KPSGPSS   45 (46)
T ss_dssp             SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSC------CCSSSTT
T ss_pred             cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6787764

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.86  E-value=7.1e-10  Score=74.87  Aligned_cols=50  Identities=6%  Similarity=0.145  Sum_probs=42.9

Q ss_pred             ccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251          96 GVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus        96 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      ++.|.....|..|+++|.++++|.|++|++.|...+.|..|+++|++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            35677888888888888888899999999999999999999888888876

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.8e-09  Score=70.16  Aligned_cols=41  Identities=29%  Similarity=0.686  Sum_probs=37.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGE------KPSGPSS   45 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSS------CCCCTTC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6777764

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-09  Score=69.71  Aligned_cols=40  Identities=20%  Similarity=0.420  Sum_probs=36.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~   44 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGE------SGPSSG   44 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCS------SSSCCC
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCC------CCCCCC
Confidence            4599999999999999999999999999999988      567663

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.6e-09  Score=69.55  Aligned_cols=40  Identities=20%  Similarity=0.458  Sum_probs=35.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~   44 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARK------SGPSSG   44 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCC------CSSCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCC------CCCCCC
Confidence            4599999999999999999999999999999987      567663

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.5e-09  Score=70.54  Aligned_cols=40  Identities=18%  Similarity=0.450  Sum_probs=36.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhcc-CCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDE-NGGSAKDKPGAYN  349 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~-~~~~~~~~~~~c~  349 (434)
                      +.|++++||.|++||++|.+...|.+|+++|++ +      +||.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~------~~~~C~   45 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGV------KSGPSS   45 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCC------TTSSSC
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCC------CCCCCC
Confidence            459999999999999999999999999999998 6      677775

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.9e-09  Score=69.99  Aligned_cols=41  Identities=24%  Similarity=0.621  Sum_probs=36.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCS------CCSSCCC
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777754

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.85  E-value=4.6e-10  Score=71.37  Aligned_cols=32  Identities=31%  Similarity=0.499  Sum_probs=12.3

Q ss_pred             CCeecCcCCcccCCHHHHHHHHHhccCCCcee
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHERIHTGQRPYI   91 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   91 (434)
                      ++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            9 NPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            33333333333333333333333333333333

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.5e-09  Score=69.67  Aligned_cols=40  Identities=18%  Similarity=0.520  Sum_probs=36.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      +.|++++||.|++||++|.+.++|.+|+++|+++      +||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~   44 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGE------SGPSSG   44 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTS------SCSCCC
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCC------CCCCCC
Confidence            4599999999999999999999999999999988      567663

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.3e-09  Score=69.24  Aligned_cols=39  Identities=23%  Similarity=0.704  Sum_probs=35.1

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAY  348 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c  348 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGS------GPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCC------SSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCC------CCCCC
Confidence            4599999999999999999999999999999987      56655

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.1e-09  Score=70.32  Aligned_cols=40  Identities=23%  Similarity=0.534  Sum_probs=36.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      +.|++++||.|++||++|.+...|.+|+++|+++      ++|.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~   44 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQ------SGPSSG   44 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSS------CSCCCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCC------CCCCCC
Confidence            4699999999999999999999999999999987      567663

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.2e-09  Score=71.75  Aligned_cols=41  Identities=22%  Similarity=0.413  Sum_probs=25.6

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGV   97 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~   97 (434)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|.+|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            44556666666666666666666666666666666666653

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.6e-09  Score=70.31  Aligned_cols=41  Identities=20%  Similarity=0.572  Sum_probs=36.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGE------KPSGPSS   45 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSS------SSSCCCC
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777764

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.1e-09  Score=69.03  Aligned_cols=40  Identities=15%  Similarity=0.316  Sum_probs=35.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|.
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~   44 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGE------SGPSSG   44 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTS------CCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCC------CCCCCC
Confidence            4589999999999999999999999999999988      567663

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.84  E-value=1.5e-09  Score=68.83  Aligned_cols=39  Identities=28%  Similarity=0.601  Sum_probs=35.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAY  348 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c  348 (434)
                      +.|++++||.|++||++|.+.++|.+|+++|+++      +||.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~------k~~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQS------GPSSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCC------CCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCC------CCCCC
Confidence            4599999999999999999999999999999988      56655

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=69.58  Aligned_cols=39  Identities=33%  Similarity=0.721  Sum_probs=35.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAY  348 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c  348 (434)
                      +.|++++||.|++||++|.+...|.+|+++|+++      +||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGS------GPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSC------CSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCC------CCCCC
Confidence            4599999999999999999999999999999988      56655

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=4.7e-10  Score=72.93  Aligned_cols=34  Identities=41%  Similarity=0.586  Sum_probs=14.0

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      +++|.|..|++.|.....|..|+++|++++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A           10 QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             SSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3344444444444444444444444444444433

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.1e-10  Score=72.75  Aligned_cols=37  Identities=41%  Similarity=0.763  Sum_probs=13.8

Q ss_pred             ccCCCceeccccccccccchHHHchhhhcCCCCceec
Q psy8251          84 HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC  120 (434)
Q Consensus        84 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  120 (434)
                      |+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             cCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3333333333333333333333333333333333333

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.7e-09  Score=70.20  Aligned_cols=41  Identities=32%  Similarity=0.703  Sum_probs=37.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~p~~C~~   45 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSC------CSSCCCC
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCC------CCcCCCC
Confidence            4599999999999999999999999999999987      6777764

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.9e-09  Score=69.95  Aligned_cols=41  Identities=27%  Similarity=0.680  Sum_probs=37.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSC------CSSCSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777764

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.7e-09  Score=70.26  Aligned_cols=41  Identities=22%  Similarity=0.578  Sum_probs=36.8

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2yto_A            5 SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGE------RHSGPSS   45 (46)
T ss_dssp             CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCC------CBTTTBC
T ss_pred             cccCCCCCEECcccCCccCCHhHHHHHHHHcCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6777753

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-09  Score=69.22  Aligned_cols=39  Identities=31%  Similarity=0.659  Sum_probs=35.2

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAY  348 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c  348 (434)
                      +.|++++||.|++||++|.+.+.|.+|+++|+++      +||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C   42 (42)
T 2ytb_A            4 GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGS------GPSSG   42 (42)
T ss_dssp             CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCC------SCCCC
T ss_pred             cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCC------CCCCC
Confidence            4599999999999999999999999999999988      56655

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.7e-09  Score=70.18  Aligned_cols=41  Identities=22%  Similarity=0.590  Sum_probs=36.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~~   45 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQE------TLSGPSS   45 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSC------CSSSCCC
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999988      6777753

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.5e-09  Score=68.59  Aligned_cols=38  Identities=29%  Similarity=0.638  Sum_probs=34.8

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAY  348 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c  348 (434)
                      .|++++||.|++||+.|.+...|..|+++|+++      +||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGS------GPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCC------SCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCC------CCcCC
Confidence            589999999999999999999999999999988      56665

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.9e-09  Score=70.02  Aligned_cols=40  Identities=20%  Similarity=0.607  Sum_probs=36.3

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|+++      +||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------~~~~C~   44 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERT------DPSGPS   44 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHS------CCSSCS
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCC------CCCCCC
Confidence            4599999999999999999999999999999988      577765

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.82  E-value=4.8e-10  Score=72.89  Aligned_cols=34  Identities=35%  Similarity=0.648  Sum_probs=14.5

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      +++|.|..|++.|.....|..|+++|++++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A           10 EKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444444444444444444444444444444444

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=5.7e-10  Score=72.51  Aligned_cols=35  Identities=37%  Similarity=0.886  Sum_probs=12.7

Q ss_pred             cCCCceeccccccccccchHHHchhhhcCCCCcee
Q psy8251          85 TGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYN  119 (434)
Q Consensus        85 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  119 (434)
                      +++++|.|++|++.|.....|..|+++|++++||.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            8 TGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            33333333333333333333333333333333333

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.6e-10  Score=72.20  Aligned_cols=38  Identities=39%  Similarity=0.813  Sum_probs=15.2

Q ss_pred             hccCCCceeccccccccccchHHHchhhhcCCCCceec
Q psy8251          83 IHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC  120 (434)
Q Consensus        83 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  120 (434)
                      +|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            6 SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            33333344444444444444444444444444444433

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.9e-09  Score=69.18  Aligned_cols=40  Identities=23%  Similarity=0.492  Sum_probs=36.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      +.|++++||.|++||+.|.+.+.|..|+++|.++      +||.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------~~~~C~   44 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAK------SGPSSG   44 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCC------CCTTCC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCC------CCcCCC
Confidence            4599999999999999999999999999999987      567663

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.2e-10  Score=70.75  Aligned_cols=34  Identities=21%  Similarity=0.413  Sum_probs=14.3

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      +++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            8 EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444433

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.1e-10  Score=72.37  Aligned_cols=38  Identities=39%  Similarity=0.756  Sum_probs=15.6

Q ss_pred             hccCCCceeccccccccccchHHHchhhhcCCCCceec
Q psy8251          83 IHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC  120 (434)
Q Consensus        83 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  120 (434)
                      +|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            33344444444444444444444444444444444443

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=5.7e-10  Score=72.51  Aligned_cols=35  Identities=31%  Similarity=0.626  Sum_probs=15.0

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            9 GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            33444444444444444444444444444444444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=5.8e-10  Score=72.47  Aligned_cols=35  Identities=31%  Similarity=0.670  Sum_probs=15.1

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            9 GEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            33444444444444444444444444444444444

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.1e-10  Score=72.37  Aligned_cols=38  Identities=34%  Similarity=0.593  Sum_probs=18.9

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44445555555555555555555555555555554443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.7e-10  Score=72.17  Aligned_cols=24  Identities=38%  Similarity=0.816  Sum_probs=8.5

Q ss_pred             eecCcCCcccCCHHHHHHHHHhcc
Q psy8251          62 WCCRFCNKRMMTKLSLGIHERIHT   85 (434)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~h~   85 (434)
                      |.|..|++.|.....|..|+++|+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emi_A           13 YECSECGKAFIQKSTLSMHQRIHR   36 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCcccCCHHHHHHHHhHhC
Confidence            333333333333333333333333

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=6.2e-10  Score=72.34  Aligned_cols=37  Identities=46%  Similarity=0.845  Sum_probs=14.0

Q ss_pred             ccCCCceeccccccccccchHHHchhhhcCCCCceec
Q psy8251          84 HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC  120 (434)
Q Consensus        84 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  120 (434)
                      |+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3333333333333333333333333333333333333

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=6.3e-10  Score=72.28  Aligned_cols=33  Identities=39%  Similarity=0.671  Sum_probs=12.6

Q ss_pred             CCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++|.|..|++.|.....|..|+++|++++||.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A           11 KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            333333333333333333333333333333333

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=1.2e-09  Score=70.52  Aligned_cols=40  Identities=28%  Similarity=0.444  Sum_probs=27.5

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCG   96 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~   96 (434)
                      +++++|.|.+|++.|.....|..|+++|+++++|.|+.||
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5566677777777777777777777777777777776664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=7.3e-10  Score=72.01  Aligned_cols=36  Identities=36%  Similarity=0.816  Sum_probs=13.3

Q ss_pred             ccCCCceeccccccccccchHHHchhhhcCCCCcee
Q psy8251          84 HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYN  119 (434)
Q Consensus        84 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  119 (434)
                      |+++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yth_A            7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSS
T ss_pred             CCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            333333333333333333333333333333333333

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=6.7e-10  Score=72.16  Aligned_cols=31  Identities=42%  Similarity=0.820  Sum_probs=11.4

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCcee
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYI   91 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   91 (434)
                      +|.|..|++.|.....|..|+++|++++||.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep1_A           12 PYECSDCGKSFIKKSQLHVHQRIHTGENPSG   42 (46)
T ss_dssp             SSCCSSSCCCCSSHHHHHHHHGGGSSSCCCS
T ss_pred             CcCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            3333333333333333333333333333333

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=7.1e-10  Score=72.02  Aligned_cols=35  Identities=51%  Similarity=0.956  Sum_probs=12.7

Q ss_pred             cCCCceeccccccccccchHHHchhhhcCCCCcee
Q psy8251          85 TGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYN  119 (434)
Q Consensus        85 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  119 (434)
                      +++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yrj_A            8 TGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            33333333333333333333333333333333333

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=7.1e-10  Score=72.06  Aligned_cols=31  Identities=32%  Similarity=0.663  Sum_probs=11.4

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCcee
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYI   91 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   91 (434)
                      +|.|..|++.|.....|..|+++|++++||.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A           12 CYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            3333333333333333333333333333333

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=7e-10  Score=72.13  Aligned_cols=38  Identities=42%  Similarity=0.861  Sum_probs=16.0

Q ss_pred             hccCCCceeccccccccccchHHHchhhhcCCCCceec
Q psy8251          83 IHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC  120 (434)
Q Consensus        83 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  120 (434)
                      +|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            33444444444444444444444444444444444444

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=8.5e-10  Score=70.06  Aligned_cols=37  Identities=41%  Similarity=0.788  Sum_probs=15.5

Q ss_pred             hccCCCceeccccccccccchHHHchhhhcCCCCcee
Q psy8251          83 IHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYN  119 (434)
Q Consensus        83 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  119 (434)
                      +|+++++|.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            3444444444444444444444444444444444443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=6.2e-10  Score=72.33  Aligned_cols=34  Identities=35%  Similarity=0.681  Sum_probs=14.4

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      +++|.|..|++.|.....|..|+++|++++||.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A           10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            3344444444444444444444444444444443

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=6.3e-10  Score=72.31  Aligned_cols=31  Identities=35%  Similarity=0.663  Sum_probs=11.6

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCcee
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYI   91 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   91 (434)
                      +|.|..|++.|.....|..|+++|++++||.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A           12 PYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             TTCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             CeECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            3333333333333333333333333333333

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.2e-09  Score=69.63  Aligned_cols=41  Identities=24%  Similarity=0.641  Sum_probs=36.9

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~  350 (434)
                      +.|++++||.|++||+.|.+...|.+|+++|.++      +||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~   45 (46)
T 2eq3_A            5 SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGK------KPSGPSS   45 (46)
T ss_dssp             CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCC------CCCCSCC
T ss_pred             cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCC------CCCCCCC
Confidence            4599999999999999999999999999999987      6777753

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=7.5e-10  Score=71.15  Aligned_cols=36  Identities=42%  Similarity=0.714  Sum_probs=13.3

Q ss_pred             ccCCCceeccccccccccchHHHchhhhcCCCCcee
Q psy8251          84 HTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYN  119 (434)
Q Consensus        84 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  119 (434)
                      |+++++|.|++|++.|.....|..|+++|++++||.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             SSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            333333333333333333333333333333333333

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.1e-09  Score=69.38  Aligned_cols=39  Identities=26%  Similarity=0.693  Sum_probs=35.8

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      .|++++||.|++||+.|.+...|.+|+++|+++      ++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~------k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGE------KSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSC------CCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCC------CCCCCC
Confidence            589999999999999999999999999999988      677775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=3.7e-09  Score=69.33  Aligned_cols=43  Identities=23%  Similarity=0.476  Sum_probs=37.3

Q ss_pred             hccCCCceeccccccccccchHHHchhhhcCCCCceeccccCc
Q psy8251          83 IHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGK  125 (434)
Q Consensus        83 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k  125 (434)
                      .|.++++|.|.+|++.|.....|..|+++|++++||.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3567788999999999999999999999999999999999885

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=6.9e-10  Score=72.12  Aligned_cols=30  Identities=37%  Similarity=0.760  Sum_probs=10.8

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCce
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPY   90 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   90 (434)
                      +|.|..|++.|.....|..|+++|+++++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq1_A           12 PYKCNECGKAFRAHSNLTTHQVIHTGEKPS   41 (46)
T ss_dssp             CCCCTTTTCCCSSHHHHHHHHTTTCCSCCS
T ss_pred             CeECCcCChhhCCHHHHHHHHHHhCCCCCC
Confidence            333333333333333333333333333333

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=69.41  Aligned_cols=39  Identities=26%  Similarity=0.572  Sum_probs=35.5

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAY  348 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c  348 (434)
                      +.|++++||.|++||++|.+...|.+|+++|+++      +||.|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~------~~~~C   43 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRK------SGPSS   43 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCC------CCCSC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCC------CCCCC
Confidence            4599999999999999999999999999999987      56766

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=9.2e-10  Score=70.71  Aligned_cols=30  Identities=40%  Similarity=0.696  Sum_probs=11.1

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCce
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPY   90 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   90 (434)
                      +|.|..|++.|.....|..|+++|+++++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eof_A           12 PYECNECQKAFNTKSNLMVHQRTHTGESGP   41 (44)
T ss_dssp             SEECTTTCCEESCHHHHHHHHHHTTTSSCS
T ss_pred             CeECCCCCcccCCHhHHHHHHHHhCCCCCC
Confidence            333333333333333333333333333333

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=8.4e-10  Score=71.72  Aligned_cols=33  Identities=27%  Similarity=0.502  Sum_probs=12.7

Q ss_pred             CCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A           11 KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            333333333333333333333333333333333

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1e-09  Score=70.47  Aligned_cols=37  Identities=24%  Similarity=0.526  Sum_probs=14.2

Q ss_pred             hccCCCceeccccccccccchHHHchhhhcCCCCcee
Q psy8251          83 IHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYN  119 (434)
Q Consensus        83 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  119 (434)
                      +|+++++|.|++|++.|.....|..|+++|++++||.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            6 SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            3333333333333333333333333333333333333

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=8.2e-10  Score=71.77  Aligned_cols=35  Identities=34%  Similarity=0.594  Sum_probs=15.8

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            9 GKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            34444444444444444444444444444444444

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.78  E-value=4.5e-10  Score=75.85  Aligned_cols=50  Identities=18%  Similarity=0.190  Sum_probs=29.8

Q ss_pred             cccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCce
Q psy8251          69 KRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY  118 (434)
Q Consensus        69 ~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  118 (434)
                      +.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            34455555555666666666666666666666666666666666666554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=9.8e-10  Score=71.40  Aligned_cols=39  Identities=21%  Similarity=0.364  Sum_probs=17.3

Q ss_pred             HhccCCCceeccccccccccchHHHchhhhcCC-CCceec
Q psy8251          82 RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG-QRKYNC  120 (434)
Q Consensus        82 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C  120 (434)
                      ++|.++++|.|.+|++.|.....|..|+++|++ ++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            344444444444444444444444444444444 444444

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=8.6e-10  Score=71.66  Aligned_cols=35  Identities=31%  Similarity=0.577  Sum_probs=15.5

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            33444444444444444444444444444444444

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=8.7e-10  Score=70.83  Aligned_cols=20  Identities=50%  Similarity=1.081  Sum_probs=7.0

Q ss_pred             eeccccccccccchHHHchh
Q psy8251          90 YICDWCGVGFRSKANLLQHQ  109 (434)
Q Consensus        90 ~~C~~C~~~f~~~~~l~~H~  109 (434)
                      |.|.+|++.|.....|..|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~   32 (44)
T 2en7_A           13 YVCNECGKAFRSKSYLIIHT   32 (44)
T ss_dssp             SCCTTTCCCCSSHHHHHHHH
T ss_pred             eECCCCCCccCCHHHHHHHh
Confidence            33333333333333333333

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=6.9e-10  Score=72.15  Aligned_cols=39  Identities=23%  Similarity=0.302  Sum_probs=22.5

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            8 EGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445555565566666555555556555555555555554

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.3e-09  Score=70.79  Aligned_cols=39  Identities=41%  Similarity=0.736  Sum_probs=18.4

Q ss_pred             HhccCCCceeccccccccccchHHHchhhhcCCCCceec
Q psy8251          82 RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC  120 (434)
Q Consensus        82 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  120 (434)
                      ++|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            344444444444444444444444444444444444444

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.2e-09  Score=70.92  Aligned_cols=38  Identities=37%  Similarity=0.792  Sum_probs=14.7

Q ss_pred             hccCCCceeccccccccccchHHHchhhhcCCCCceec
Q psy8251          83 IHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC  120 (434)
Q Consensus        83 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  120 (434)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            6 SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            33333333333333333333333333333333333333

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=4.9e-09  Score=67.27  Aligned_cols=35  Identities=23%  Similarity=0.560  Sum_probs=32.8

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +.|++++||.|++||+.|.+.+.|.+|+++|++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (44)
T 2epv_A            5 SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS   39 (44)
T ss_dssp             CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCS
T ss_pred             cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCC
Confidence            46999999999999999999999999999999884

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.74  E-value=1.3e-09  Score=69.13  Aligned_cols=35  Identities=26%  Similarity=0.514  Sum_probs=15.9

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         8 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34444444444444444444444444444444443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.5e-09  Score=69.71  Aligned_cols=40  Identities=28%  Similarity=0.479  Sum_probs=19.3

Q ss_pred             HHhccCCCceeccccccccccchHHHchhhhcCCCCceec
Q psy8251          81 ERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNC  120 (434)
Q Consensus        81 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  120 (434)
                      +++|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444444444444444444444444444444444444444

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=9.9e-10  Score=69.79  Aligned_cols=34  Identities=29%  Similarity=0.748  Sum_probs=13.4

Q ss_pred             hhcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         110 PVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       110 ~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      ++|++++||.|+.|++.|.+...|..|+++|+++
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   37 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGS   37 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCC
Confidence            3333333344444444444333444443333333

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4.7e-09  Score=64.46  Aligned_cols=35  Identities=23%  Similarity=0.478  Sum_probs=32.6

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +.|++++||.|++||+.|.+..+|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            45999999999999999999999999999999874

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.5e-09  Score=68.01  Aligned_cols=42  Identities=26%  Similarity=0.672  Sum_probs=37.9

Q ss_pred             ccCCCCCcccCC--ccccccCCchhHHHHHHhhccCCCCCCCCCCCCCCC
Q psy8251         304 CDHHCDRPYDCD--VCGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYNKT  351 (434)
Q Consensus       304 ~~H~~~k~f~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~~~  351 (434)
                      +.|++++||.|+  .||+.|.+...|.+|+++|+++      +||.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~------k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGV------KPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCC------CSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCC------CCCCCCCC
Confidence            359999999998  8999999999999999999987      68888765

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=9.5e-10  Score=71.45  Aligned_cols=35  Identities=23%  Similarity=0.386  Sum_probs=15.0

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            9 GERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            33444444444444444444444444444444444

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5e-09  Score=67.96  Aligned_cols=39  Identities=41%  Similarity=0.734  Sum_probs=28.0

Q ss_pred             chhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       107 ~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      +|+++|++++||.|++|++.|.....|..|+++|+++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH   40 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCC
Confidence            466677777777777777777777777777777777666

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.71  E-value=6.2e-09  Score=64.82  Aligned_cols=33  Identities=21%  Similarity=0.485  Sum_probs=30.3

Q ss_pred             CCCCCcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      |++++||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   33 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDR   33 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCc
Confidence            578899999999999999999999999999884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=6.2e-09  Score=66.76  Aligned_cols=39  Identities=18%  Similarity=0.493  Sum_probs=28.4

Q ss_pred             chhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       107 ~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSG   40 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            466677777777777777777777777777777777666

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.9e-09  Score=69.25  Aligned_cols=35  Identities=20%  Similarity=0.265  Sum_probs=16.6

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            9 AKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34444444444444444444444444444444444

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=9.8e-09  Score=65.83  Aligned_cols=39  Identities=36%  Similarity=0.689  Sum_probs=31.2

Q ss_pred             chhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       107 ~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG   40 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC
Confidence            467778888888888888888888888888888887776

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=7.4e-09  Score=65.64  Aligned_cols=38  Identities=29%  Similarity=0.699  Sum_probs=28.8

Q ss_pred             hhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       108 H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      |+++|.+++||.|++|++.|.+.+.|..|+++|+++++
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP   39 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            56677777777777777777777777777777777766

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=7.9e-09  Score=63.73  Aligned_cols=32  Identities=16%  Similarity=0.213  Sum_probs=30.2

Q ss_pred             CCCCCcccCCc--cccccCCchhHHHHHHhhccC
Q psy8251         306 HHCDRPYDCDV--CGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       306 H~~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +++++||+|++  |+++|.+.+.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            78899999986  999999999999999999975

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.69  E-value=8.4e-09  Score=62.37  Aligned_cols=33  Identities=21%  Similarity=0.386  Sum_probs=31.2

Q ss_pred             CCCCCcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      |++++||.|++||+.|.+.+.|.+|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            788999999999999999999999999999874

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3e-09  Score=69.67  Aligned_cols=39  Identities=26%  Similarity=0.412  Sum_probs=19.5

Q ss_pred             CCCCCeecC--cCCcccCCHHHHHHHHHhccCCCceecccc
Q psy8251          57 SESSPWCCR--FCNKRMMTKLSLGIHERIHTGQRPYICDWC   95 (434)
Q Consensus        57 ~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   95 (434)
                      .++++|.|.  .|++.|.....|..|+++|+++++|.|.+|
T Consensus         8 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            8 TGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344455554  455555555555555555555555555443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.68  E-value=9.3e-09  Score=62.21  Aligned_cols=33  Identities=30%  Similarity=0.591  Sum_probs=31.3

Q ss_pred             CCCCCcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      |++++||.|++||+.|.+.+.|.+|+++|+++.
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            889999999999999999999999999999874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.66  E-value=1.4e-08  Score=62.30  Aligned_cols=34  Identities=24%  Similarity=0.501  Sum_probs=31.5

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +.|++++||.|+.||+.|.+...|.+|+++|.++
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            4599999999999999999999999999999864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=3.8e-09  Score=68.14  Aligned_cols=35  Identities=34%  Similarity=0.609  Sum_probs=16.4

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.65  E-value=6e-09  Score=66.50  Aligned_cols=37  Identities=19%  Similarity=0.287  Sum_probs=23.8

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICD   93 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   93 (434)
                      .++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            6 SGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            4556666666666666666666666666666666664

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.3e-09  Score=79.06  Aligned_cols=65  Identities=23%  Similarity=0.328  Sum_probs=40.3

Q ss_pred             HHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCc
Q psy8251          77 LGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKL  144 (434)
Q Consensus        77 L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~  144 (434)
                      |..|++++.+++++.|..|++.|. ...|..|+ .|.+++||.|+.|++.|. ...|..|+++|.++.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            445555566666666666666663 56666666 566666666666666655 366666666665543

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.64  E-value=1.9e-09  Score=75.07  Aligned_cols=56  Identities=13%  Similarity=0.236  Sum_probs=47.1

Q ss_pred             HHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhhhceecccCCcccCChh
Q psy8251         105 LLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFSRKS  184 (434)
Q Consensus       105 l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~~~~  184 (434)
                      |..|+++|++++||.|+.|++.|.....|.   ++|+++++                  |. |..|      ++.|....
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~------------------~~-C~~C------~k~f~~~~   53 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGT------------------FR-CTFC------HTEVEEDE   53 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTE------------------EB-CSSS------CCBCEECT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCC------------------EE-CCCC------CCccccCc
Confidence            567999999999999999999999988887   78999988                  44 5555      99998776


Q ss_pred             hHHH
Q psy8251         185 FVTT  188 (434)
Q Consensus       185 ~L~~  188 (434)
                      .+..
T Consensus        54 ~~~~   57 (62)
T 1vd4_A           54 SAMP   57 (62)
T ss_dssp             TCSC
T ss_pred             cccc
Confidence            6543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=9.8e-09  Score=64.67  Aligned_cols=35  Identities=40%  Similarity=0.606  Sum_probs=15.8

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCceec
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYIC   92 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   92 (434)
                      ++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            34444444444444444444444444444444443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=5.2e-09  Score=67.86  Aligned_cols=37  Identities=27%  Similarity=0.404  Sum_probs=20.5

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceecc
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICD   93 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   93 (434)
                      .++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            8 HGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3445555555555555555555555555555555553

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2e-08  Score=61.60  Aligned_cols=33  Identities=24%  Similarity=0.471  Sum_probs=31.2

Q ss_pred             cCCCCCcccCCccccccCCc-hhHHHHHHhhccC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQV-GDMRRHRKKHDEN  337 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~-~~L~~H~r~H~~~  337 (434)
                      +|++++||.|++||+.|.+. +.|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            58999999999999999999 9999999999876

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.4e-08  Score=62.40  Aligned_cols=34  Identities=21%  Similarity=0.356  Sum_probs=31.4

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHH-HHhhccC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRH-RKKHDEN  337 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H-~r~H~~~  337 (434)
                      +.|++++||.|+.||++|.+.+.|.+| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            459999999999999999999999999 9999864

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=3.1e-08  Score=60.24  Aligned_cols=33  Identities=27%  Similarity=0.653  Sum_probs=31.1

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      .|++++||.|++||+.|.+...|.+|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            488999999999999999999999999999876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=3.1e-08  Score=68.60  Aligned_cols=40  Identities=28%  Similarity=0.379  Sum_probs=34.8

Q ss_pred             cCCCCCcccCCc--cccccCCchhHHHHH-HhhccCCCCCCCCCCCCCC
Q psy8251         305 DHHCDRPYDCDV--CGAKFTQVGDMRRHR-KKHDENGGSAKDKPGAYNK  350 (434)
Q Consensus       305 ~H~~~k~f~C~~--Cgk~F~~~~~L~~H~-r~H~~~~~~~~~~~~~c~~  350 (434)
                      ..++++||+|..  ||++|.+.++|.+|+ ++|+++      +||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgE------KP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSD------LPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSC------CCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCC------CCccccc
Confidence            378999999975  999999999999997 689998      6776655

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=2e-08  Score=61.14  Aligned_cols=33  Identities=30%  Similarity=0.550  Sum_probs=31.0

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      .|++++||.|++||+.|.+.+.|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            488999999999999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=2.4e-08  Score=60.71  Aligned_cols=33  Identities=21%  Similarity=0.507  Sum_probs=31.2

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      .|++++||.|++||+.|.+...|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            488999999999999999999999999999876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=7.5e-09  Score=74.95  Aligned_cols=69  Identities=19%  Similarity=0.163  Sum_probs=59.6

Q ss_pred             chHHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcccccccccccccccccchhhhhhhhceecccCCcccC
Q psy8251         102 KANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKNGGKAFS  181 (434)
Q Consensus       102 ~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~C~~~F~  181 (434)
                      +..|..|+++|.+++|+.|..|++.|. ...|..|+ .|.++++                  +. |+.|      ++.|.
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~------------------~~-C~~C------~~~~~   54 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGART------------------EL-CGNC------GRNVL   54 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCE------------------EE-CSSS------CCEEE
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCc------------------eE-cccC------CCcCc
Confidence            356889999999999999999999995 99999999 8999988                  44 6555      99987


Q ss_pred             ChhhHHHHhhhccCCCC
Q psy8251         182 RKSFVTTHMRVHTGKLT  198 (434)
Q Consensus       182 ~~~~L~~H~~~H~~~~~  198 (434)
                       ...|..|+++|.++..
T Consensus        55 -~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A           55 -VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             -TTGGGTHHHHBTTBSS
T ss_pred             -HHHHHHHHHHccCCcC
Confidence             5999999999998643

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=2.6e-08  Score=60.60  Aligned_cols=33  Identities=15%  Similarity=0.562  Sum_probs=31.1

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      .|++++||.|++||+.|.+...|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            488999999999999999999999999999875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.55  E-value=3.4e-08  Score=60.46  Aligned_cols=36  Identities=25%  Similarity=0.504  Sum_probs=31.6

Q ss_pred             hhhhcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       108 H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      |+++|.+++||.|+.|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            778888999999999999999999999999888763

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.53  E-value=5.6e-08  Score=57.92  Aligned_cols=29  Identities=21%  Similarity=0.544  Sum_probs=27.5

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~   29 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLG   29 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999984

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=4.1e-08  Score=60.11  Aligned_cols=36  Identities=25%  Similarity=0.685  Sum_probs=29.2

Q ss_pred             hhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         110 PVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       110 ~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      ++|.+++||.|+.|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467788888888888888888888888888887654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.50  E-value=3.4e-08  Score=64.64  Aligned_cols=35  Identities=26%  Similarity=0.660  Sum_probs=30.2

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHH-hhccCCC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRK-KHDENGG  339 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r-~H~~~~~  339 (434)
                      +|++++||.|++||++|.+..+|.+|++ +|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3889999999999999999999999999 9998853

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=5.6e-08  Score=59.10  Aligned_cols=32  Identities=16%  Similarity=0.464  Sum_probs=30.4

Q ss_pred             CCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      |++++||.|+.||+.|.+...|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            78899999999999999999999999999875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=3.4e-09  Score=79.27  Aligned_cols=54  Identities=20%  Similarity=0.373  Sum_probs=35.0

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCC
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG  114 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  114 (434)
                      .++++|.|.+|++.|.....|..|+++|++++||.|..|.    ....|..|.+.|.+
T Consensus        21 ~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           21 LQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             CCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            5566777777777777777777777777777777765443    34455556666554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=1.6e-08  Score=75.59  Aligned_cols=37  Identities=16%  Similarity=0.468  Sum_probs=27.5

Q ss_pred             hhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         109 QPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       109 ~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .++|++++||.|+.|++.|.....|..|+++|+++++
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp   53 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ   53 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC
Confidence            4557777777777777777777777777777777766

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=7.8e-08  Score=59.24  Aligned_cols=33  Identities=30%  Similarity=0.652  Sum_probs=30.5

Q ss_pred             CCCCCcccCC--ccccccCCchhHHHHHHhhccCC
Q psy8251         306 HHCDRPYDCD--VCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       306 H~~~k~f~C~--~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      |++++||.|+  .||++|.+.+.|.+|+++|++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            6789999999  59999999999999999999884

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.46  E-value=1.1e-07  Score=57.25  Aligned_cols=35  Identities=34%  Similarity=0.725  Sum_probs=28.2

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      +|.+++||.|++|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36778888888888888888888888888887653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.44  E-value=8.9e-08  Score=58.67  Aligned_cols=33  Identities=21%  Similarity=0.503  Sum_probs=30.5

Q ss_pred             cCCCCCcccCCc--cccccCCchhHHHHHHhhccC
Q psy8251         305 DHHCDRPYDCDV--CGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       305 ~H~~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      .|++++||.|++  ||+.|.+.+.|.+|+++|+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            388999999995  999999999999999999976

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.44  E-value=1e-07  Score=57.37  Aligned_cols=34  Identities=26%  Similarity=0.532  Sum_probs=26.8

Q ss_pred             cCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       112 h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      |.++++|.|+.|++.|.+.+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5677888888888888888888888888877653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.37  E-value=1.1e-07  Score=58.96  Aligned_cols=34  Identities=24%  Similarity=0.619  Sum_probs=17.9

Q ss_pred             CCCCeecCcCCcccCCHHHHHHHHHhccCCCcee
Q psy8251          58 ESSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYI   91 (434)
Q Consensus        58 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   91 (434)
                      ++++|.|..|++.|...+.|..|+++|+++++|.
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            3445555555555555555555555555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.34  E-value=1e-07  Score=57.78  Aligned_cols=26  Identities=19%  Similarity=0.428  Sum_probs=25.0

Q ss_pred             CCCCCcccCCccccccCCchhHHHHH
Q psy8251         306 HHCDRPYDCDVCGAKFTQVGDMRRHR  331 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~F~~~~~L~~H~  331 (434)
                      +.+++||.|+.||++|.+.++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            67899999999999999999999998

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.34  E-value=2.2e-07  Score=53.17  Aligned_cols=28  Identities=18%  Similarity=0.490  Sum_probs=26.4

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +||.|+.||+.|.+.+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=2.3e-07  Score=57.04  Aligned_cols=33  Identities=21%  Similarity=0.376  Sum_probs=27.0

Q ss_pred             hcCCCCceeccc--cCcccCChhHHHhhhccccCC
Q psy8251         111 VHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       111 ~h~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      .+++++||+|+.  |++.|...+.|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            356788888876  888888888888888888775

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=2e-07  Score=53.68  Aligned_cols=29  Identities=38%  Similarity=0.864  Sum_probs=27.1

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      ++||.|+.||++|.+...|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47999999999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.33  E-value=2.8e-07  Score=52.67  Aligned_cols=28  Identities=29%  Similarity=0.791  Sum_probs=26.3

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +||.|++||++|.+.+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=3.1e-07  Score=52.34  Aligned_cols=28  Identities=36%  Similarity=0.718  Sum_probs=26.5

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +||.|+.||++|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5899999999999999999999999876

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=2.9e-07  Score=64.23  Aligned_cols=33  Identities=24%  Similarity=0.533  Sum_probs=31.2

Q ss_pred             CCCCCcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +.+++||.|++|++.|.+...|.+|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            788999999999999999999999999999874

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.32  E-value=1.6e-07  Score=53.27  Aligned_cols=28  Identities=39%  Similarity=0.869  Sum_probs=26.0

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhcc
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      ++||.|++||+.|.+.+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4799999999999999999999999974

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=4.2e-07  Score=53.39  Aligned_cols=29  Identities=48%  Similarity=0.999  Sum_probs=27.1

Q ss_pred             CCcccCC--ccccccCCchhHHHHHHhhccC
Q psy8251         309 DRPYDCD--VCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       309 ~k~f~C~--~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      ++||.|+  .||++|.+.+.|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4799999  8999999999999999999876

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.30  E-value=2.1e-07  Score=52.32  Aligned_cols=27  Identities=22%  Similarity=0.770  Sum_probs=25.2

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhc
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      ++||.|+.||+.|.+.+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999984

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=3.7e-07  Score=55.30  Aligned_cols=33  Identities=27%  Similarity=0.516  Sum_probs=27.4

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      .|.+++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            567788888888888888888888888888765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=2.5e-07  Score=56.57  Aligned_cols=34  Identities=18%  Similarity=0.381  Sum_probs=27.4

Q ss_pred             hhcCCCCceeccccCcccCChhHHHhh-hccccCC
Q psy8251         110 PVHTGQRKYNCTVCGKAFSRKSFVTTH-MRVHTGK  143 (434)
Q Consensus       110 ~~h~~~~~~~C~~C~k~F~~~~~L~~H-~~~h~~~  143 (434)
                      ++|++++||.|+.|++.|...+.|..| ++.|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467788888888888888888888888 7777664

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=6.6e-07  Score=61.96  Aligned_cols=38  Identities=21%  Similarity=0.372  Sum_probs=27.1

Q ss_pred             CCCCCeecCc--CCcccCCHHHHHHHH-HhccCCCceeccc
Q psy8251          57 SESSPWCCRF--CNKRMMTKLSLGIHE-RIHTGQRPYICDW   94 (434)
Q Consensus        57 ~~~~~~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~~~C~~   94 (434)
                      ++++||+|.+  |++.|...+.|..|+ ++|++++||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            5677777754  777777777777776 5677777777654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.28  E-value=1.5e-07  Score=53.00  Aligned_cols=27  Identities=30%  Similarity=0.722  Sum_probs=25.1

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhc
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      ++||.|+.||++|.+.+.|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999984

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.27  E-value=5.6e-07  Score=51.69  Aligned_cols=29  Identities=17%  Similarity=0.548  Sum_probs=26.9

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +||.|+.||+.|.+.+.|..|+++|+++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999999764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.27  E-value=2.4e-07  Score=60.19  Aligned_cols=34  Identities=24%  Similarity=0.500  Sum_probs=31.2

Q ss_pred             ccCCCCCcccCC--ccccccCCchhHHHHHHhhccC
Q psy8251         304 CDHHCDRPYDCD--VCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       304 ~~H~~~k~f~C~--~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      ..|++++||.|+  .||++|.+.+.|.+|+++|+++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            459999999996  7999999999999999999876

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=4.2e-07  Score=55.06  Aligned_cols=33  Identities=24%  Similarity=0.513  Sum_probs=26.7

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      .|.+++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            567788888888888888888888888888765

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=3.1e-07  Score=52.43  Aligned_cols=28  Identities=36%  Similarity=0.882  Sum_probs=26.5

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +||.|+.||+.|.+...|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            5899999999999999999999999876

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=3.3e-07  Score=55.95  Aligned_cols=34  Identities=24%  Similarity=0.458  Sum_probs=27.0

Q ss_pred             hhcCCCCceeccccCcccCCh-hHHHhhhccccCC
Q psy8251         110 PVHTGQRKYNCTVCGKAFSRK-SFVTTHMRVHTGK  143 (434)
Q Consensus       110 ~~h~~~~~~~C~~C~k~F~~~-~~L~~H~~~h~~~  143 (434)
                      ++|.+++||.|+.|++.|... ..|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            357778888888888888888 8888888888765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=4.5e-07  Score=54.84  Aligned_cols=33  Identities=30%  Similarity=0.596  Sum_probs=26.9

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +|.+++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            467788888888888888888888888888765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.25  E-value=7e-07  Score=52.98  Aligned_cols=31  Identities=26%  Similarity=0.343  Sum_probs=22.3

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCCCcee
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYI   91 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   91 (434)
                      ||.|.+|++.|...+.|..|+++|+++++|.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5777777777777777777777777776664

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.25  E-value=3.9e-08  Score=58.15  Aligned_cols=29  Identities=17%  Similarity=0.367  Sum_probs=27.3

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +||.|++||++|.+.+.|.+|+++|++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999999884

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.25  E-value=4.5e-07  Score=52.83  Aligned_cols=28  Identities=36%  Similarity=1.006  Sum_probs=26.3

Q ss_pred             CcccCC--ccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCD--VCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~--~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +||.|+  .||++|.+.+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            589998  9999999999999999999876

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.24  E-value=3.4e-07  Score=51.36  Aligned_cols=27  Identities=26%  Similarity=0.778  Sum_probs=24.1

Q ss_pred             cccCCccccccCCchhHHHHHHhhccC
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      ||.|++||+.|.+...|.+|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999863

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.57  E-value=1.3e-07  Score=54.24  Aligned_cols=28  Identities=32%  Similarity=0.780  Sum_probs=26.3

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +||.|+.||++|.+.++|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5899999999999999999999999875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.56  E-value=1.3e-07  Score=54.61  Aligned_cols=29  Identities=31%  Similarity=0.713  Sum_probs=26.9

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      ++||.|+.||+.|.+.+.|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899999999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=7.2e-07  Score=53.91  Aligned_cols=33  Identities=27%  Similarity=0.561  Sum_probs=26.4

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      .|.++++|.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            466778888888888888888888888888765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=2.1e-07  Score=51.84  Aligned_cols=26  Identities=38%  Similarity=0.998  Sum_probs=24.4

Q ss_pred             CcccCCccccccCCchhHHHHHHhhc
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      +||.|+.||++|.+.+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999984

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.16  E-value=8.6e-07  Score=57.77  Aligned_cols=35  Identities=20%  Similarity=0.519  Sum_probs=28.3

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhc-cccCCcc
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMR-VHTGKLT  145 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~-~h~~~~~  145 (434)
                      +|++++||.|.+|++.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4788899999999999999999999999 8888765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=9.8e-07  Score=53.37  Aligned_cols=33  Identities=27%  Similarity=0.641  Sum_probs=26.2

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      .|.+++||.|+.|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            356777888888888888888888888888765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.13  E-value=5.3e-07  Score=58.48  Aligned_cols=40  Identities=18%  Similarity=0.435  Sum_probs=32.7

Q ss_pred             HHchhhhcCCCCceecc--ccCcccCChhHHHhhhccccCCc
Q psy8251         105 LLQHQPVHTGQRKYNCT--VCGKAFSRKSFVTTHMRVHTGKL  144 (434)
Q Consensus       105 l~~H~~~h~~~~~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  144 (434)
                      +..|...|.+++||.|+  .|++.|...+.|..|+++|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34555678899999995  69999999999999999988753

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.12  E-value=1e-06  Score=50.65  Aligned_cols=28  Identities=36%  Similarity=0.751  Sum_probs=25.8

Q ss_pred             CcccCCccccccCCchhHHHH-HHhhccC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRH-RKKHDEN  337 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H-~r~H~~~  337 (434)
                      +||.|+.||+.|.+.+.|..| +++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            589999999999999999999 6899875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.09  E-value=1.5e-06  Score=53.20  Aligned_cols=34  Identities=24%  Similarity=0.569  Sum_probs=25.3

Q ss_pred             cCCCCceecc--ccCcccCChhHHHhhhccccCCcc
Q psy8251         112 HTGQRKYNCT--VCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       112 h~~~~~~~C~--~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      |++++||.|.  .|++.|...+.|.+|+++|+++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            4567777887  488888887888888777777665

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.02  E-value=2.2e-06  Score=52.19  Aligned_cols=32  Identities=31%  Similarity=0.759  Sum_probs=25.8

Q ss_pred             cCCCCceeccc--cCcccCChhHHHhhhccccCC
Q psy8251         112 HTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       112 h~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      |++++||.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56778888874  888888888888888888775

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.98  E-value=3.4e-06  Score=47.90  Aligned_cols=28  Identities=36%  Similarity=0.712  Sum_probs=21.9

Q ss_pred             CceeccccCcccCChhHHHhhhccccCC
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4678888888888888888888887765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=3.4e-06  Score=48.21  Aligned_cols=29  Identities=28%  Similarity=0.701  Sum_probs=22.3

Q ss_pred             CCceeccccCcccCChhHHHhhhccccCC
Q psy8251         115 QRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       115 ~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      ++||.|+.|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35788888888888888888888877764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.97  E-value=9.1e-07  Score=52.04  Aligned_cols=26  Identities=23%  Similarity=0.552  Sum_probs=11.2

Q ss_pred             eeccccCcccCChhHHHhhhccccCC
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      |.|+.|++.|...+.|..|+++|+++
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSSSSS
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHccC
Confidence            44444444444444444444444443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.97  E-value=3.7e-06  Score=47.36  Aligned_cols=28  Identities=61%  Similarity=1.062  Sum_probs=22.1

Q ss_pred             CCceeccccCcccCChhHHHhhhccccC
Q psy8251         115 QRKYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       115 ~~~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      ++||.|+.|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3578888888888888888888887764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=3.9e-06  Score=46.96  Aligned_cols=27  Identities=26%  Similarity=0.589  Sum_probs=21.0

Q ss_pred             CCceeccccCcccCChhHHHhhhcccc
Q psy8251         115 QRKYNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       115 ~~~~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      ++||.|+.|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            357888888888888888888887763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.93  E-value=4.5e-06  Score=50.40  Aligned_cols=25  Identities=16%  Similarity=0.371  Sum_probs=17.1

Q ss_pred             CCCCCeecCcCCcccCCHHHHHHHH
Q psy8251          57 SESSPWCCRFCNKRMMTKLSLGIHE   81 (434)
Q Consensus        57 ~~~~~~~C~~C~~~f~~~~~L~~H~   81 (434)
                      .+++||.|+.|++.|..++.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566777777777777777777776

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.93  E-value=2.5e-06  Score=48.43  Aligned_cols=27  Identities=33%  Similarity=0.709  Sum_probs=25.1

Q ss_pred             CcccCC--ccccccCCchhHHHHHHhhcc
Q psy8251         310 RPYDCD--VCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       310 k~f~C~--~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      +||.|+  .||+.|.+.+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999999974

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.91  E-value=4.8e-06  Score=46.47  Aligned_cols=27  Identities=26%  Similarity=0.634  Sum_probs=21.0

Q ss_pred             CCceeccccCcccCChhHHHhhhcccc
Q psy8251         115 QRKYNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       115 ~~~~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      ++||.|+.|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            357888888888888888888887763

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.88  E-value=6.5e-06  Score=45.83  Aligned_cols=26  Identities=38%  Similarity=0.856  Sum_probs=20.8

Q ss_pred             ceeccccCcccCChhHHHhhhccccC
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      ||.|+.|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57888888888888888888888765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.88  E-value=7.1e-06  Score=47.87  Aligned_cols=29  Identities=38%  Similarity=0.708  Sum_probs=22.0

Q ss_pred             CCceecc--ccCcccCChhHHHhhhccccCC
Q psy8251         115 QRKYNCT--VCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       115 ~~~~~C~--~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      ++||.|+  .|++.|...+.|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            3577787  7888888888888888877765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.87  E-value=5.1e-06  Score=47.46  Aligned_cols=29  Identities=24%  Similarity=0.488  Sum_probs=22.3

Q ss_pred             CceeccccCcccCChhHHHhhhccccCCc
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHTGKL  144 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~~  144 (434)
                      ++|.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            36788888888888888888888777654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.85  E-value=7.6e-06  Score=47.37  Aligned_cols=28  Identities=46%  Similarity=0.924  Sum_probs=22.1

Q ss_pred             Cceecc--ccCcccCChhHHHhhhccccCC
Q psy8251         116 RKYNCT--VCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       116 ~~~~C~--~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +||.|+  .|++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            467887  7888888888888888888765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.06  E-value=2.2e-06  Score=48.81  Aligned_cols=28  Identities=43%  Similarity=0.916  Sum_probs=20.0

Q ss_pred             CceeccccCcccCChhHHHhhhccccCC
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3577777777777777777777777654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.83  E-value=7.2e-06  Score=57.11  Aligned_cols=35  Identities=20%  Similarity=0.292  Sum_probs=29.5

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .+.+++||.|..|++.|.....|.+|+++|+++..
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            46778899999999999999999999999988643

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.04  E-value=2.4e-06  Score=49.02  Aligned_cols=28  Identities=32%  Similarity=0.812  Sum_probs=20.3

Q ss_pred             CceeccccCcccCChhHHHhhhccccCC
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5677777777777777777777777654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.82  E-value=1.6e-05  Score=44.98  Aligned_cols=27  Identities=26%  Similarity=0.576  Sum_probs=17.6

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCC
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQ   87 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~   87 (434)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.81  E-value=6e-06  Score=46.71  Aligned_cols=28  Identities=21%  Similarity=0.655  Sum_probs=21.2

Q ss_pred             CceeccccCcccCChhHHHhhhccccCC
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3677888888888888888887777664

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=1.5e-05  Score=45.01  Aligned_cols=27  Identities=44%  Similarity=0.757  Sum_probs=19.6

Q ss_pred             CeecCcCCcccCCHHHHHHHHHhccCC
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERIHTGQ   87 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~~~   87 (434)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            677777777777777777777777664

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.73  E-value=1.3e-05  Score=45.74  Aligned_cols=28  Identities=32%  Similarity=1.000  Sum_probs=20.6

Q ss_pred             CceeccccCcccCChhHHHhh-hccccCC
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTH-MRVHTGK  143 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H-~~~h~~~  143 (434)
                      +||.|+.|++.|.+.+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            367777788888777778777 5677664

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.87  E-value=5.3e-06  Score=45.84  Aligned_cols=25  Identities=40%  Similarity=0.868  Sum_probs=18.1

Q ss_pred             CceeccccCcccCChhHHHhhhccc
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h  140 (434)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3677777777777777777777665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.53  E-value=4.5e-05  Score=42.96  Aligned_cols=27  Identities=33%  Similarity=0.833  Sum_probs=21.0

Q ss_pred             Cceecc--ccCcccCChhHHHhhhccccC
Q psy8251         116 RKYNCT--VCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       116 ~~~~C~--~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      ++|.|+  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            367888  888888888888888887753

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.09  E-value=0.00063  Score=46.87  Aligned_cols=52  Identities=23%  Similarity=0.291  Sum_probs=37.9

Q ss_pred             chhhhcCCHHHHHHHHHhhcCCCC-C-CCCCeecC--cCCcccCCHHHHHHHHHhc
Q psy8251          33 ICKETFYKHSELVRHLEREHNIPR-S-ESSPWCCR--FCNKRMMTKLSLGIHERIH   84 (434)
Q Consensus        33 ~C~~~f~~~~~L~~H~~~~H~~~~-~-~~~~~~C~--~C~~~f~~~~~L~~H~~~h   84 (434)
                      .|++.|.+...|..|+...|-... . ...+|.|.  .|++.+.....|..|+++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            488888888888888865662111 0 22378887  6988888888899998764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.95  E-value=0.0013  Score=45.27  Aligned_cols=46  Identities=15%  Similarity=0.285  Sum_probs=23.4

Q ss_pred             ccccccCCHHHHHHHH-HHcCCCC------CCCCcc--chhhhcCCHHHHHHHHHh
Q psy8251           4 RGFRGFRQVINLLKHR-REHGGNL------SFDNCH--ICKETFYKHSELVRHLER   50 (434)
Q Consensus         4 ~C~~~F~~~~~l~~H~-~~h~~~~------~~~~C~--~C~~~f~~~~~L~~H~~~   50 (434)
                      .|++.|.+...|..|+ +.|.+.+      +|. |.  .|+..+.....|..|++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~-C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLA-CNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEE-CCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCE-eeCCCCcCCCCChHHHHhhccc
Confidence            3555555555555555 3444333      344 53  455555555555555553

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.43  E-value=0.0005  Score=53.59  Aligned_cols=29  Identities=17%  Similarity=0.337  Sum_probs=27.2

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHh
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      .|+|++||.|..|++.|.+.+.|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            48999999999999999999999999874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.11  E-value=0.0021  Score=51.00  Aligned_cols=75  Identities=21%  Similarity=0.362  Sum_probs=44.6

Q ss_pred             CCeecCcCCcccCCHHHHHHHH--HhccCC-Cceeccc------cccccccchHHHchhhhcCCCCceeccccCcccCCh
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHE--RIHTGQ-RPYICDW------CGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRK  130 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~--~~h~~~-~~~~C~~------C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~  130 (434)
                      +++.|..|+..|.+.+.+..|.  +.|... +.+.+..      =++.+...    .+...+.+...|.|.+|++.|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeCCH
Confidence            4566777777777666666666  333211 1122210      01222211    122345567789999999999999


Q ss_pred             hHHHhhhc
Q psy8251         131 SFVTTHMR  138 (434)
Q Consensus       131 ~~L~~H~~  138 (434)
                      ..|..|..
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99999976

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.76  E-value=0.0064  Score=50.98  Aligned_cols=102  Identities=20%  Similarity=0.234  Sum_probs=71.8

Q ss_pred             ccchhhhcCCH-----HHHHHHHHhhcCCCCCCCCCeec--CcCCcccCCHHHHHHHHHhccCCCceeccccccccccch
Q psy8251          31 CHICKETFYKH-----SELVRHLEREHNIPRSESSPWCC--RFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKA  103 (434)
Q Consensus        31 C~~C~~~f~~~-----~~L~~H~~~~H~~~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~  103 (434)
                      |+.|...+...     ..+..-+.         .-...|  .-|+..+. ...|..|+. .-.-.+..|+.|+..+ .+.
T Consensus        56 CP~Cr~~~~~~~~~~~~~~~~~i~---------~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~  123 (170)
T 3hcs_A           56 CPVDNEILLENQLFPDNFAKREIL---------SLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKF  123 (170)
T ss_dssp             CTTTCCBCCGGGCEECHHHHHHHH---------TSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGG
T ss_pred             CCCCccCcchhhhhhhHHHHHHHh---------hcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHH
Confidence            99998776543     12222222         234567  45877664 457888874 3345678999999988 567


Q ss_pred             HHHchhhhcCCCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         104 NLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       104 ~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .|..|+...-..++-.|+.|+..+. ...|..|..++.|+.+
T Consensus       124 ~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          124 HINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALE  164 (170)
T ss_dssp             GHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC---
T ss_pred             HHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhh
Confidence            7999998777788899999999886 5788999999988765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.38  E-value=0.0046  Score=48.18  Aligned_cols=33  Identities=24%  Similarity=0.474  Sum_probs=28.9

Q ss_pred             hhhhcCCCCceeccccCcccCChhHHHhhhccc
Q psy8251         108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus       108 H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h  140 (434)
                      +...|+|+++|.|..|++.|.+.+.|..|++..
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            445688999999999999999999999998754

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.43  E-value=0.045  Score=34.02  Aligned_cols=28  Identities=21%  Similarity=0.273  Sum_probs=25.3

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      .+|.|+.|++.|.....|+.||+---++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            6899999999999999999999976554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.15  E-value=0.04  Score=43.55  Aligned_cols=70  Identities=19%  Similarity=0.247  Sum_probs=44.1

Q ss_pred             CCccccccCCHHHHHHHH--HHcCCC-CCCCCccch-------hhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCccc
Q psy8251           2 WPRGFRGFRQVINLLKHR--REHGGN-LSFDNCHIC-------KETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRM   71 (434)
Q Consensus         2 C~~C~~~F~~~~~l~~H~--~~h~~~-~~~~~C~~C-------~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f   71 (434)
                      |..|+..|.+...+..|.  +.|... +.+. + .+       ++.+....         +.....+...|.|..|++.|
T Consensus        35 C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~-~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~C~~C~~~f  103 (127)
T 1zu1_A           35 CKVCSAVLISESQKLAHYQSRKHANKVRRYM-A-INQGEDSVPAKKFKAAP---------AEISDGEDRSKCCPVCNMTF  103 (127)
T ss_dssp             ETTTTEECCSHHHHHHHHHCHHHHHHHHHHH-H-HTTCCCCCSCCCCSCCS---------SCCSSCCCTTTEETTTTEEC
T ss_pred             CcCCCCEeCCHHHHHHHHCcHHHHHHHHHHh-c-ccCcccCCCCCccCCCc---------cccccCCCCCeEcCCCCCEe
Confidence            899999999999999998  445321 1111 1 01       11111100         11112456678899999999


Q ss_pred             CCHHHHHHHHH
Q psy8251          72 MTKLSLGIHER   82 (434)
Q Consensus        72 ~~~~~L~~H~~   82 (434)
                      .+...|..|..
T Consensus       104 ~s~~~~~~H~~  114 (127)
T 1zu1_A          104 SSPVVAESHYI  114 (127)
T ss_dssp             SSHHHHHHHHT
T ss_pred             CCHHHHHHHHC
Confidence            99999999975

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.92  E-value=0.051  Score=33.78  Aligned_cols=30  Identities=17%  Similarity=0.319  Sum_probs=23.7

Q ss_pred             CceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .+|.|+.|+..|.....|+.||+.--++..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~v   40 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEMV   40 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcchh
Confidence            468899999999999999999886555443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.32  E-value=0.11  Score=43.20  Aligned_cols=104  Identities=16%  Similarity=0.176  Sum_probs=69.1

Q ss_pred             CCCccccccCCH-----HHHHHHHHHcCCCCCCCCc--cchhhhcCCHHHHHHHHHhhcCCCCCCCCCeecCcCCcccCC
Q psy8251           1 MWPRGFRGFRQV-----INLLKHRREHGGNLSFDNC--HICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMT   73 (434)
Q Consensus         1 ~C~~C~~~F~~~-----~~l~~H~~~h~~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~C~~C~~~f~~   73 (434)
                      +|+.|...+...     ..+..-+.    +.... |  .-|+..+. ...|..|.. .-     .-.+..|+.|+..+ .
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~----~l~v~-C~n~GC~~~~~-~~~l~~H~~-~C-----~~~~v~C~~C~~~~-~  121 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL----SLMVK-CPNEGCLHKME-LRHLEDHQA-HC-----EFALMDCPQCQRPF-Q  121 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH----TSEEE-CCSTTCCCEEE-GGGHHHHHT-TC-----TTSEEECTTTCCEE-E
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh----hcccC-CCCCCCCceec-HhHHHHHHh-cC-----CceeeECCCCChHH-H
Confidence            478887766542     12222222    23344 6  35666544 457788864 32     23568899999987 5


Q ss_pred             HHHHHHHHHhccCCCceeccccccccccchHHHchhhhcCCCCce
Q psy8251          74 KLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTGQRKY  118 (434)
Q Consensus        74 ~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  118 (434)
                      ...|..|+...-..+...|+.|+..+.. ..|..|..++.|+.++
T Consensus       122 r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          122 KFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             GGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             HHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            6789999987778888999999998864 5789999998887654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.63  E-value=0.31  Score=28.28  Aligned_cols=26  Identities=15%  Similarity=0.332  Sum_probs=21.3

Q ss_pred             ceeccccCcccCChhHHHhhhccccC
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      .|.|++|.+.|.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            48899999999999999999765443

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.23  E-value=0.34  Score=28.14  Aligned_cols=26  Identities=12%  Similarity=0.374  Sum_probs=22.4

Q ss_pred             cccCCccccccCCchhHHHHHHhhcc
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      .|.|++|.+.|.+...|..|-...+.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            49999999999999999999765443

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.12  E-value=0.42  Score=33.51  Aligned_cols=38  Identities=26%  Similarity=0.597  Sum_probs=17.1

Q ss_pred             eeccccccccccchHHHchhhhcCCCCceeccccCcccC
Q psy8251          90 YICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFS  128 (434)
Q Consensus        90 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~  128 (434)
                      |.|..||.++. +..+..|...-.+-..|.|-.|++.|.
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            44444444433 333444444333333455555555554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=81.56  E-value=0.84  Score=32.00  Aligned_cols=49  Identities=18%  Similarity=0.321  Sum_probs=37.5

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchh
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQ  109 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  109 (434)
                      -..|.|..||.++. +..|..|...-.+-..|.|..|++.|.. ..++.|.
T Consensus         8 MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A            8 MVFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             CCEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             eeEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            44689999998876 4678899776666567999999999985 4566663

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.34  E-value=0.74  Score=26.82  Aligned_cols=25  Identities=20%  Similarity=0.332  Sum_probs=22.6

Q ss_pred             CCcccCCccccccCCchhHHHHHHh
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      ..++.|..|+-+|....++..|.+-
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            4679999999999999999999864

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.88  E-value=1  Score=28.80  Aligned_cols=25  Identities=28%  Similarity=0.612  Sum_probs=21.5

Q ss_pred             CCc-ccCCccccccCCchhHHHHHHh
Q psy8251         309 DRP-YDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       309 ~k~-f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      ++| -.|.+|+.+|....+|+.|+-+
T Consensus        10 ~~P~~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           10 DGTKPECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             CCCCSCCTTTTCCCCSSSCHHHHHTS
T ss_pred             CCCCccccccCcccccccchhhhhcc
Confidence            344 6999999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	434
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-10
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-10
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-08
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	7e-08
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	4e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.004
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	9e-06
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	1e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	6e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.004
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	9e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.002
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	3e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	7e-04
d2dmda2	26	g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {H	4e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.002
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	0.004

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 2e-10
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 88  RPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVH 140
           + Y C  CG  F  K+   +H  +H G R Y C VCGK F  K  +  HM++H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 9e-05
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 61  PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVH 112
            + C+ C K    K     H  +H G RPY C  CG  F+ K +L+ H  +H
Sbjct: 3   LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.002
 Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 26/78 (33%)

Query: 116 RKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKN 175
           + Y C  CGK+F+ KS    HM +H G      G                    C     
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCG-------------------VC----- 36

Query: 176 GGKAFSRKSFVTTHMRVH 193
            GK F  K  +  HM++H
Sbjct: 37  -GKKFKMKHHLVGHMKIH 53

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (126), Expect = 4e-10
 Identities = 18/32 (56%), Positives = 23/32 (71%)

Query: 111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
           +H+G++ Y C  CGKAFSR S +  H RVHTG
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (118), Expect = 6e-09
 Identities = 17/32 (53%), Positives = 22/32 (68%)

Query: 83  IHTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
           IH+G++PY C  CG  F   + L+QHQ VHTG
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.001
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
           H  ++PY C  CG  F++   + +H++ H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.002
 Identities = 13/19 (68%), Positives = 14/19 (73%)

Query: 177 GKAFSRKSFVTTHMRVHTG 195
           GKAFSR S +  H RVHTG
Sbjct: 14  GKAFSRSSILVQHQRVHTG 32

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (119), Expect = 3e-09
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 78  GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
           G  E     +R Y CD CG  F   ++L +H+  HTG
Sbjct: 1   GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (113), Expect = 2e-08
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
           + +     +R+Y C  CGK+FS  S ++ H R HTG
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (112), Expect = 4e-08
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 82  RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
           R HTG++PY C  C   FR K  L  H   +  
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (112), Expect = 4e-08
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
            HTG++ Y C+ C K F +K  +  H + +   
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 6e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKH-DEN 337
           H  ++PY C  C   F Q   +  H K++ D N
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.7 bits (111), Expect = 5e-08
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT 145
            +G+R + C +C  AF+ K+    H++VHT  L+
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 35

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (94), Expect = 1e-05
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 84  HTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
            +G+RP++C  C   F +KAN  +H  VHT 
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (110), Expect = 7e-08
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 80  HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
             R  TG +P+ C  C   F    +L  H+  H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.3 bits (105), Expect = 3e-07
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
                TG + + C  C ++FSR   +  H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (107), Expect = 2e-07
 Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 111 VHTGQRKYNCTVCGKAFSRKSFVTTH-MRVHTGKL 144
            H+G++ Y C +C   F++   +  H ++ HT  +
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (102), Expect = 8e-07
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 82  RIHTGQRPYICDWCGVGFRSKANLLQH-QPVHTG 114
           R H+G++PY C  C   F     +  H    HT 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.004
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 306 HHCDRPYDCDVCGAKFTQVGDMRRH-RKKHDEN 337
           H  ++PY+C +C A+FTQ G M+ H  +KH EN
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 44.2 bits (105), Expect = 3e-07
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 116 RKYNCTVCGKAFSRKSFVTTHMRVHTG 142
           R + C VC +AF+R+  +  H R HT 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTN 27

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 88  RPYICDWCGVGFRSKANLLQHQPVHTGQR 116
           R ++C+ C   F  + +L +H   HT ++
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 177 GKAFSRKSFVTTHMRVHTG 195
            +AF+R+  +  H R HT 
Sbjct: 9   TRAFARQEHLKRHYRSHTN 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 115 QRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
           Q+ + C +C + FSR   +TTH+R HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (89), Expect = 4e-05
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 87  QRPYICDWCGVGFRSKANLLQHQPVHTG 114
           Q+P+ C  C   F    +L  H   HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.5 bits (80), Expect = 8e-04
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 177 GKAFSRKSFVTTHMRVHTG 195
            + FSR   +TTH+R HTG
Sbjct: 10  MRNFSRSDHLTTHIRTHTG 28

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (103), Expect = 7e-07
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 85  TGQRPYICDWCGVGFRSKANLLQH-QPVHTGQRKYNCTV 122
           +  +PYIC  CG GF    +L  H + VHT +R + C V
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 113 TGQRKYNCTVCGKAFSRKSFVTTHMR-VHTG 142
           +  + Y C  CGK FSR   +  H++ VHT 
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTS 31

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 5e-05
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 61 PWCCRFCNKRMMTKLSLGIHER-IHTGQRPYICD 93
          P+ C+ C K       L  H + +HT +RP+ C 
Sbjct: 5  PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 4e-06
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 118 YNCTVCGKAFSRKSFVTTHMRVHTG 142
           + C  C K F R   ++ H++ H  
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQN 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 4e-05
 Identities = 6/29 (20%), Positives = 12/29 (41%)

Query: 88  RPYICDWCGVGFRSKANLLQHQPVHTGQR 116
           + + C  C   F    +L +H   H  ++
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.004
 Identities = 8/28 (28%), Positives = 12/28 (42%)

Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQR 88
           + C  C KR M    L  H + H  ++
Sbjct: 2  KFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (94), Expect = 9e-06
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 118 YNCTVCGKAFSRKSFVTTHMRVHT 141
           Y C  CGKAFS+ S +  H R+HT
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 88  RPYICDWCGVGFRSKANLLQHQPVHT 113
           +PY C  CG  F   + L+ HQ +HT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 64 CRFCNKRMMTKLSLGIHERIHTGQRPYICDW 94
             C K    K  L  H ++H+  R YIC++
Sbjct: 6  EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 6e-05
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 119 NCTVCGKAFSRKSFVTTHMRVHTG 142
               CGK+F+ K  +  HM++H+ 
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSD 28

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 90  YICDW--CGVGFRSKANLLQHQPVHTGQRKYNC 120
           + C    CG  F  K +L +H  +H+  R Y C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (75), Expect = 0.004
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query: 177 GKAFSRKSFVTTHMRVHTG 195
           GK+F+ K  +  HM++H+ 
Sbjct: 10  GKSFNFKKHLKEHMKLHSD 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (93), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
           + + CT   C K++SR   + TH+R HTG
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 88  RPYICDW--CGVGFRSKANLLQHQPVHTGQ 115
           +P+ C +  C   +    NL  H   HTG+
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 9e-04
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 177 GKAFSRKSFVTTHMRVHTG 195
            K++SR   + TH+R HTG
Sbjct: 11  RKSYSRLENLKTHLRSHTG 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
           R + CT   CGK F+R   +  H R HTG
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 88  RPYICDW--CGVGFRSKANLLQHQPVHTGQR 116
           RP++C W  CG  F     L +H+  HTG++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 177 GKAFSRKSFVTTHMRVHTG 195
           GK F+R   +  H R HTG
Sbjct: 11  GKRFTRSDELQRHKRTHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)

Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
           R Y C V  C + FSR + +T H+R+HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 88  RPYICDW--CGVGFRSKANLLQHQPVHTG 114
           RPY C    C   F   A+L +H  +HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 177 GKAFSRKSFVTTHMRVHTG 195
            + FSR + +T H+R+HTG
Sbjct: 11  DRRFSRSADLTRHIRIHTG 29

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTGK 143
           R Y+C    C KAF R   +  H + H  K
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 88  RPYICDW--CGVGFRSKANLLQHQPVHTGQ 115
           RPY CD   C   F    +L++H+  H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 7/20 (35%), Positives = 9/20 (45%)

Query: 177 GKAFSRKSFVTTHMRVHTGK 196
            KAF R   +  H + H  K
Sbjct: 12  DKAFVRNHDLIRHKKSHQEK 31

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.8 bits (90), Expect = 3e-05
 Identities = 6/40 (15%), Positives = 14/40 (35%), Gaps = 2/40 (5%)

Query: 105 LLQHQPVHTGQRKYNCTVC--GKAFSRKSFVTTHMRVHTG 142
            +         + + C      K F R+  + +H++ H  
Sbjct: 6   SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
           + + CT   CGK FS    + TH+R+HTG
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 88  RPYICDW--CGVGFRSKANLLQHQPVHTGQ 115
           +P+ C +  CG  F    NL  H  +HTG 
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 4e-04
 Identities = 16/25 (64%), Positives = 18/25 (72%)

Query: 118 YNCTVCGKAFSRKSFVTTHMRVHTG 142
           + C VCGK FSRK  + THMR HTG
Sbjct: 2   HKCEVCGKCFSRKDKLKTHMRCHTG 26

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHT 141
           R Y C    C K F++ + + +H+  H 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.5 bits (74), Expect = 0.004
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 309 DRPYDCDVCGAKFTQVGDMRRHRKKH 334
           ++P+ CD+CG KF +  + +RH K H
Sbjct: 1   EKPFACDICGRKFARSDERKRHTKIH 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	434
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.52
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.48
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.29
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.21
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.17
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.13
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.12
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.11
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.1
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.09
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.09
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.08
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.04
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.02
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.97
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.95
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.89
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.86
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.82
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.82
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.8
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.75
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.74
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.73
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.67
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.64
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.61
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.59
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.59
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.57
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.47
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.44
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.38
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.37
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.33
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.21
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.2
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.04
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.01
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.01
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.99
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.84
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.82
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.79
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.74
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.73
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.72
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.63
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.62
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.59
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.55
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.35
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.34
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.25
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.23
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.07
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.06
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.05
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.02
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.0
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.99
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.99
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.92
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.87
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.83
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.74
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.71
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.59
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.56
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.45
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.33
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.29
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.18
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.18
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.16
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.05
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.99
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.86
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.8
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.48
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.46
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.37
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.25
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.93
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.73
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.76
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.56
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.36
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.3
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.67
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.91
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.17
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.15
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	90.91
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.57
d1y0jb1	36	U-shaped transcription factor, different fingers {	88.93
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.83
d1y0jb1	36	U-shaped transcription factor, different fingers {	87.34
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.28
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	87.27
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.93
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	86.85
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.31
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	86.0
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	85.16
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	84.15
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	83.31
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	82.69
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	82.55
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.42

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.6e-15  Score=99.51  Aligned_cols=52  Identities=40%  Similarity=0.852  Sum_probs=27.0

Q ss_pred             CceeccccccccccchHHHchhhhcCCCCceeccccCcccCChhHHHhhhccc
Q psy8251          88 RPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVH  140 (434)
Q Consensus        88 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h  140 (434)
                      +||.| .||+.|.....|..|+++|++++||.|++||+.|.+.+.|..|+++|
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            44555 25555555555555555555555555555555555555555555443

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.1e-14  Score=96.36  Aligned_cols=53  Identities=34%  Similarity=0.697  Sum_probs=46.9

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHHhccCCCceeccccccccccchHHHchhhhc
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVH  112 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  112 (434)
                      ++||.|+ ||+.|.....|..|+++|++++||.|.+||+.|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4789994 9999999999999999999999999999999999999999998876

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=4.8e-13  Score=77.15  Aligned_cols=33  Identities=27%  Similarity=0.681  Sum_probs=31.6

Q ss_pred             cCCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         305 DHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       305 ~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +|++++||+|+.||++|.+.++|.+|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            499999999999999999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.4e-12  Score=77.45  Aligned_cols=35  Identities=26%  Similarity=0.534  Sum_probs=32.5

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      ++|+|++||+|++||++|.+.++|.+|+++|++++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            36999999999999999999999999999998763

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=2.6e-12  Score=77.38  Aligned_cols=35  Identities=31%  Similarity=0.737  Sum_probs=32.7

Q ss_pred             cccCCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         303 FCDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       303 ~~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +++|++++||.|++||++|.+.++|.+|+++|+|+
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            34699999999999999999999999999999985

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=4.8e-12  Score=73.92  Aligned_cols=32  Identities=31%  Similarity=0.655  Sum_probs=30.7

Q ss_pred             CCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      |+|++||+|++||+.|.+.++|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            79999999999999999999999999999865

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=8.5e-12  Score=75.07  Aligned_cols=37  Identities=38%  Similarity=0.743  Sum_probs=34.2

Q ss_pred             chhhhcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       107 ~H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +|+++|++++||.|++||++|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6889999999999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.4e-11  Score=73.95  Aligned_cols=36  Identities=28%  Similarity=0.686  Sum_probs=32.5

Q ss_pred             CCCcccCCccccccCCchhHHHHHH-hhccCCCCCCCCCCCCC
Q psy8251         308 CDRPYDCDVCGAKFTQVGDMRRHRK-KHDENGGSAKDKPGAYN  349 (434)
Q Consensus       308 ~~k~f~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~~~~c~  349 (434)
                      .+|||+|++||++|.+.++|.+|++ +|+|+      +||.|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~e------kpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSE------RPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCC------CCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCC------cCcCCc
Confidence            4799999999999999999999986 79999      688775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.5e-11  Score=72.76  Aligned_cols=34  Identities=35%  Similarity=0.784  Sum_probs=30.5

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      ++|+|++||.|++||++|++.++|.+|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3699999999999999999999999998766654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=1e-11  Score=68.46  Aligned_cols=28  Identities=21%  Similarity=0.752  Sum_probs=26.9

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhcc
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      ||||+|++||++|.+.++|.+|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=2.2e-11  Score=72.67  Aligned_cols=33  Identities=24%  Similarity=0.538  Sum_probs=31.0

Q ss_pred             ccCCCCCcccCCccccccCCchhHHHHHHhhcc
Q psy8251         304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       304 ~~H~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      +.|++++||+|++||++|.++++|.+|+++|.+
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            569999999999999999999999999999964

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.09  E-value=2.1e-11  Score=68.06  Aligned_cols=29  Identities=28%  Similarity=0.752  Sum_probs=27.6

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +||.|++||++|++.+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999973

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.5e-11  Score=67.04  Aligned_cols=29  Identities=21%  Similarity=0.634  Sum_probs=27.5

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +||.|++||++|.+.++|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999873

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.1e-11  Score=68.51  Aligned_cols=33  Identities=55%  Similarity=1.119  Sum_probs=27.3

Q ss_pred             hcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       111 ~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +|++++||+|.+||++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478888888888888888888888888888875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=9.8e-11  Score=70.15  Aligned_cols=36  Identities=31%  Similarity=0.630  Sum_probs=25.9

Q ss_pred             CCCeecCcCCcccCCHHHHHHHHH-hccCCCceeccc
Q psy8251          59 SSPWCCRFCNKRMMTKLSLGIHER-IHTGQRPYICDW   94 (434)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~   94 (434)
                      ++||.|.+||+.|...+.|..|++ +|++++||.|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            567777777777777777777764 577777777753

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=1.1e-10  Score=69.57  Aligned_cols=35  Identities=26%  Similarity=0.535  Sum_probs=30.8

Q ss_pred             hhhhcCCCCceeccccCcccCChhHHHhhhccccC
Q psy8251         108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       108 H~~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      |.|+|++++||+|++|++.|.+++.|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67889999999999999999999999999988854

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.4e-10  Score=68.63  Aligned_cols=34  Identities=29%  Similarity=0.707  Sum_probs=27.7

Q ss_pred             hhcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         110 PVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       110 ~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      |+|+|++||+|.+||++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4688888888888888888888888888888764

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=9.3e-11  Score=62.75  Aligned_cols=26  Identities=35%  Similarity=0.843  Sum_probs=25.0

Q ss_pred             CcccCCccccccCCchhHHHHHHhhc
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      |||+|+.|||+|.+.++|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999995

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=4.9e-10  Score=65.24  Aligned_cols=32  Identities=34%  Similarity=0.770  Sum_probs=27.1

Q ss_pred             cCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       112 h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      |+|++||+|++|++.|.+.+.|.+|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67888888888888888888888888888764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5e-10  Score=62.63  Aligned_cols=28  Identities=18%  Similarity=0.711  Sum_probs=26.7

Q ss_pred             CcccCCc--cccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDV--CGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~--Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      |||.|++  ||++|.+.++|++|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999998  999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=5.1e-10  Score=65.98  Aligned_cols=34  Identities=21%  Similarity=0.609  Sum_probs=27.3

Q ss_pred             hhcCCCCceeccccCcccCChhHHHhhhccccCC
Q psy8251         110 PVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       110 ~~h~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      ++|+|++||+|++|++.|..+++|.+|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4688888888888888888888888887655543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=4.8e-10  Score=70.42  Aligned_cols=34  Identities=24%  Similarity=0.523  Sum_probs=31.9

Q ss_pred             cCCCCCcccCCc--cccccCCchhHHHHHHhhccCC
Q psy8251         305 DHHCDRPYDCDV--CGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       305 ~H~~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      .|++++||.|++  ||++|...++|.+|+++|+|++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            499999999987  9999999999999999999873

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=5.1e-10  Score=62.75  Aligned_cols=28  Identities=29%  Similarity=0.816  Sum_probs=26.5

Q ss_pred             CcccCCc--cccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDV--CGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~--Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      |||.|++  ||++|++.++|.+|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999987  999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=6.6e-10  Score=61.05  Aligned_cols=28  Identities=46%  Similarity=1.010  Sum_probs=23.5

Q ss_pred             CCceeccccCcccCChhHHHhhhccccC
Q psy8251         115 QRKYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       115 ~~~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      |+||+|++|++.|...+.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.80  E-value=9.8e-10  Score=61.15  Aligned_cols=29  Identities=38%  Similarity=0.823  Sum_probs=23.7

Q ss_pred             CceeccccCcccCChhHHHhhhccccCCc
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHTGKL  144 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~~  144 (434)
                      +||.|++|++.|...+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888888888888888888888888864

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.75  E-value=8.5e-10  Score=69.25  Aligned_cols=42  Identities=17%  Similarity=0.466  Sum_probs=35.7

Q ss_pred             chHHHchhhhcCCCCceeccc--cCcccCChhHHHhhhccccCCc
Q psy8251         102 KANLLQHQPVHTGQRKYNCTV--CGKAFSRKSFVTTHMRVHTGKL  144 (434)
Q Consensus       102 ~~~l~~H~~~h~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~~  144 (434)
                      ++.|..|+. |.+++||.|++  |++.|...+.|..|+++|+|++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            456677775 99999999977  9999999999999999999874

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2e-09  Score=60.81  Aligned_cols=29  Identities=34%  Similarity=0.959  Sum_probs=26.6

Q ss_pred             CcccCC--ccccccCCchhHHHHHHhhccCC
Q psy8251         310 RPYDCD--VCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       310 k~f~C~--~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      +||.|+  .||++|++.++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            699996  59999999999999999999873

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.9e-09  Score=59.86  Aligned_cols=29  Identities=31%  Similarity=0.756  Sum_probs=22.6

Q ss_pred             CceeccccCcccCChhHHHhhhccccCCc
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHTGKL  144 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~~  144 (434)
                      +||.|++|++.|..++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            47788888888888888888888887764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=3.8e-09  Score=61.92  Aligned_cols=32  Identities=22%  Similarity=0.557  Sum_probs=29.2

Q ss_pred             ccCCc--cccccCCchhHHHHHHhhccCCCCCCCCCCCCC
Q psy8251         312 YDCDV--CGAKFTQVGDMRRHRKKHDENGGSAKDKPGAYN  349 (434)
Q Consensus       312 f~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~c~  349 (434)
                      |.|+.  ||++|.+...|++|+++|+|+      +||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htge------kpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDT------RDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTS------CCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCC------CCEeCC
Confidence            78876  999999999999999999999      688775

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=8.4e-09  Score=58.46  Aligned_cols=29  Identities=48%  Similarity=1.014  Sum_probs=26.9

Q ss_pred             CCcccCCc--cccccCCchhHHHHHHhhccC
Q psy8251         309 DRPYDCDV--CGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       309 ~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      |+||.|++  ||++|++.++|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999988  999999999999999999854

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=4e-09  Score=58.30  Aligned_cols=27  Identities=41%  Similarity=0.970  Sum_probs=25.6

Q ss_pred             CcccCCc--cccccCCchhHHHHHHhhcc
Q psy8251         310 RPYDCDV--CGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       310 k~f~C~~--Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      |||.|++  ||++|++.++|.+|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999988  99999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=6.4e-09  Score=55.49  Aligned_cols=26  Identities=50%  Similarity=0.950  Sum_probs=20.8

Q ss_pred             CceeccccCcccCChhHHHhhhcccc
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      +||+|.+||++|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888774

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=9.3e-09  Score=56.08  Aligned_cols=26  Identities=38%  Similarity=0.843  Sum_probs=24.6

Q ss_pred             CcccCCc--cccccCCchhHHHHHHhhc
Q psy8251         310 RPYDCDV--CGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       310 k~f~C~~--Cgk~F~~~~~L~~H~r~H~  335 (434)
                      +||.|+.  ||++|++.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999988  9999999999999999995

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.3e-08  Score=59.55  Aligned_cols=32  Identities=34%  Similarity=0.736  Sum_probs=22.3

Q ss_pred             eecCc--CCcccCCHHHHHHHHHhccCCCceecc
Q psy8251          62 WCCRF--CNKRMMTKLSLGIHERIHTGQRPYICD   93 (434)
Q Consensus        62 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~   93 (434)
                      |.|+.  |++.|..+..|.+|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56665  777777777777777777777777764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2.7e-08  Score=55.39  Aligned_cols=28  Identities=43%  Similarity=0.831  Sum_probs=22.9

Q ss_pred             Cceeccc--cCcccCChhHHHhhhccccCC
Q psy8251         116 RKYNCTV--CGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       116 ~~~~C~~--C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +||+|+.  |++.|...+.|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=3e-08  Score=55.32  Aligned_cols=28  Identities=46%  Similarity=0.945  Sum_probs=22.8

Q ss_pred             Cceeccc--cCcccCChhHHHhhhccccCC
Q psy8251         116 RKYNCTV--CGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       116 ~~~~C~~--C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +||.|++  |+++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5788876  888888888888888888875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.38  E-value=5.7e-08  Score=50.68  Aligned_cols=27  Identities=41%  Similarity=1.027  Sum_probs=25.7

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhc
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      |+||.|++||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999995

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=5.6e-08  Score=48.91  Aligned_cols=26  Identities=31%  Similarity=0.795  Sum_probs=24.6

Q ss_pred             cccCCccccccCCchhHHHHHHhhcc
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      |.+|++||+.|+.+..|..|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67999999999999999999999985

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.1e-07  Score=53.42  Aligned_cols=29  Identities=45%  Similarity=0.868  Sum_probs=22.6

Q ss_pred             Cceecc--ccCcccCChhHHHhhhccccCCc
Q psy8251         116 RKYNCT--VCGKAFSRKSFVTTHMRVHTGKL  144 (434)
Q Consensus       116 ~~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  144 (434)
                      +||.|+  .|++.|...+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            478885  58888888888888888888764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.21  E-value=2.1e-07  Score=51.24  Aligned_cols=27  Identities=52%  Similarity=1.065  Sum_probs=21.9

Q ss_pred             Cceeccc--cCcccCChhHHHhhhccccC
Q psy8251         116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       116 ~~~~C~~--C~k~F~~~~~L~~H~~~h~~  142 (434)
                      +||+|++  |++.|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788866  88888888888888888875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.20  E-value=3.4e-07  Score=51.67  Aligned_cols=29  Identities=38%  Similarity=0.723  Sum_probs=23.0

Q ss_pred             CCceeccc--cCcccCChhHHHhhhccccCC
Q psy8251         115 QRKYNCTV--CGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       115 ~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      |+||.|+.  |++.|...+.|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57888877  888888888888888888753

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=8.1e-07  Score=45.82  Aligned_cols=29  Identities=21%  Similarity=0.644  Sum_probs=27.3

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      ++||+|.+|.+.-.+.+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999974

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=8.8e-07  Score=46.78  Aligned_cols=29  Identities=38%  Similarity=0.938  Sum_probs=27.4

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      ++||.|++|+..|..+..+..|+|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=9.7e-07  Score=46.70  Aligned_cols=27  Identities=30%  Similarity=0.795  Sum_probs=24.7

Q ss_pred             CcccCCc--cccccCCchhHHHHHHhhcc
Q psy8251         310 RPYDCDV--CGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       310 k~f~C~~--Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      +||.|.+  |+++|+..++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899977  99999999999999998775

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=5.6e-07  Score=48.88  Aligned_cols=26  Identities=31%  Similarity=0.775  Sum_probs=19.0

Q ss_pred             Cceeccc--cCcccCChhHHHhhhcccc
Q psy8251         116 RKYNCTV--CGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       116 ~~~~C~~--C~k~F~~~~~L~~H~~~h~  141 (434)
                      +||.|+.  |++.|...+.|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.7e-06  Score=43.40  Aligned_cols=26  Identities=62%  Similarity=1.068  Sum_probs=19.7

Q ss_pred             ceeccccCcccCChhHHHhhhccccC
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      |.+|+.|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45777788888888888888777765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=3.4e-06  Score=45.61  Aligned_cols=28  Identities=25%  Similarity=0.380  Sum_probs=24.6

Q ss_pred             CCccccccCCHHHHHHHHHHcCCCCCCC
Q psy8251           2 WPRGFRGFRQVINLLKHRREHGGNLSFD   29 (434)
Q Consensus         2 C~~C~~~F~~~~~l~~H~~~h~~~~~~~   29 (434)
                      |..||+.|.+...|.+|...|++++||.
T Consensus         8 ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           8 CEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            8889999999999999999999998873

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=4.9e-06  Score=43.27  Aligned_cols=27  Identities=26%  Similarity=0.826  Sum_probs=23.7

Q ss_pred             CCceeccccCcccCChhHHHhhhcccc
Q psy8251         115 QRKYNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       115 ~~~~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      ++||.|++||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578999999999999999999988874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=6e-06  Score=42.83  Aligned_cols=27  Identities=22%  Similarity=0.639  Sum_probs=25.5

Q ss_pred             cccCCccccccCCchhHHHHHHhhccC
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      .|.|+.||......+.|++|+|.|+++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCC
Confidence            389999999999999999999999986

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=3.5e-06  Score=43.17  Aligned_cols=27  Identities=26%  Similarity=0.597  Sum_probs=24.8

Q ss_pred             cccCCccccccCCchhHHHHHHhhccC
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      -+.|..||++|...+.|++|.-+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            358999999999999999999999975

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=9.6e-06  Score=41.75  Aligned_cols=29  Identities=38%  Similarity=0.757  Sum_probs=23.2

Q ss_pred             CCceeccccCcccCChhHHHhhhccccCC
Q psy8251         115 QRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       115 ~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      ++||+|..|...-++.+.|..|++.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46788888888888888888888888763

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=7.1e-06  Score=44.32  Aligned_cols=26  Identities=31%  Similarity=0.704  Sum_probs=10.9

Q ss_pred             cCcCCcccCCHHHHHHHHHhccCCCc
Q psy8251          64 CRFCNKRMMTKLSLGIHERIHTGQRP   89 (434)
Q Consensus        64 C~~C~~~f~~~~~L~~H~~~h~~~~~   89 (434)
                      |..||+.|.....|.+|...|++++|
T Consensus         8 ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           8 CEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            44444444444444444444444443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=6.5e-06  Score=42.02  Aligned_cols=26  Identities=23%  Similarity=0.710  Sum_probs=25.1

Q ss_pred             CcccCCccccccCCchhHHHHHHhhc
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      +||+|..|.+.-...++|.+|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999996

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1e-05  Score=42.64  Aligned_cols=29  Identities=41%  Similarity=0.923  Sum_probs=22.5

Q ss_pred             CCceeccccCcccCChhHHHhhhccccCC
Q psy8251         115 QRKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       115 ~~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      ++||.|++|+..|..+..+..|++.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46788888888888888888888877664

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1e-05  Score=46.36  Aligned_cols=27  Identities=26%  Similarity=0.731  Sum_probs=24.3

Q ss_pred             CCCCcccCCccccccCCchhHHHHHHh
Q psy8251         307 HCDRPYDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       307 ~~~k~f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      +|.+||.|.+|||.|-+..++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            467999999999999999999999753

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=2.3e-05  Score=40.12  Aligned_cols=26  Identities=46%  Similarity=0.758  Sum_probs=20.4

Q ss_pred             eeccccCcccCChhHHHhhhccccCC
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      ..|..||+.|...+.|++|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            56788888888888888888888764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.55  E-value=1.7e-05  Score=39.30  Aligned_cols=24  Identities=29%  Similarity=0.851  Sum_probs=22.9

Q ss_pred             ccCCccccccCCchhHHHHHHhhc
Q psy8251         312 YDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       312 f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      |+|..|.++|..++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999985

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=4.8e-05  Score=40.12  Aligned_cols=27  Identities=26%  Similarity=0.685  Sum_probs=19.9

Q ss_pred             Cceeccc--cCcccCChhHHHhhhccccC
Q psy8251         116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       116 ~~~~C~~--C~k~F~~~~~L~~H~~~h~~  142 (434)
                      +||.|.+  |++++...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677765  77888888888888776654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.34  E-value=6.7e-05  Score=37.74  Aligned_cols=26  Identities=27%  Similarity=0.571  Sum_probs=24.4

Q ss_pred             cCCccccccCCchhHHHHHHhhccCC
Q psy8251         313 DCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       313 ~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      .|+.|.++|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999873

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=5.5e-05  Score=40.24  Aligned_cols=28  Identities=29%  Similarity=0.854  Sum_probs=24.9

Q ss_pred             CcccCCc--cccccCCchhHHHHH-HhhccC
Q psy8251         310 RPYDCDV--CGAKFTQVGDMRRHR-KKHDEN  337 (434)
Q Consensus       310 k~f~C~~--Cgk~F~~~~~L~~H~-r~H~~~  337 (434)
                      +||.|..  |+|+|++.+.-.+|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6999987  999999999999997 898753

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00014  Score=37.54  Aligned_cols=26  Identities=31%  Similarity=0.446  Sum_probs=19.6

Q ss_pred             eecCcCCcccCCHHHHHHHHHhccCC
Q psy8251          62 WCCRFCNKRMMTKLSLGIHERIHTGQ   87 (434)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~h~~~   87 (434)
                      |.|+.||......+-|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777765

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=8.6e-05  Score=38.39  Aligned_cols=23  Identities=35%  Similarity=0.912  Sum_probs=21.9

Q ss_pred             cccCCccccccCCchhHHHHHHh
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      ||.|..|..+|.++++|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999985

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.00013  Score=36.69  Aligned_cols=25  Identities=40%  Similarity=0.820  Sum_probs=16.9

Q ss_pred             eccccCcccCChhHHHhhhccccCC
Q psy8251         119 NCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       119 ~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      .|+.|.+.|.++.-|+.|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4666777777777777776666665

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.05  E-value=0.00011  Score=37.90  Aligned_cols=25  Identities=36%  Similarity=0.905  Sum_probs=22.7

Q ss_pred             CcccCCc--cccccCCchhHHHHHHhh
Q psy8251         310 RPYDCDV--CGAKFTQVGDMRRHRKKH  334 (434)
Q Consensus       310 k~f~C~~--Cgk~F~~~~~L~~H~r~H  334 (434)
                      .||+|+.  |++.|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899964  999999999999999988

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00014  Score=37.76  Aligned_cols=28  Identities=29%  Similarity=0.711  Sum_probs=25.1

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +||+|+.|..-..+.++|..|++.-+|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            6999999999999999999999876654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.00  E-value=8.3e-05  Score=39.53  Aligned_cols=26  Identities=35%  Similarity=0.765  Sum_probs=23.0

Q ss_pred             cccCCccccccCCchhHHHHHH-hhcc
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRK-KHDE  336 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r-~H~~  336 (434)
                      ||.|.+|++.|+...-|.+|.+ .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999975 5654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00031  Score=36.45  Aligned_cols=28  Identities=18%  Similarity=0.577  Sum_probs=25.2

Q ss_pred             CcccCCccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +||.|..|.......++|+.|+++-++.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            6999999999999999999999986543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.99  E-value=0.00021  Score=40.67  Aligned_cols=30  Identities=23%  Similarity=0.585  Sum_probs=27.4

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhccCC
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHDENG  338 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~~  338 (434)
                      .+.|+|.+|++.|.+-.+|=-||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            367999999999999999999999998765

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.92  E-value=0.00023  Score=36.81  Aligned_cols=28  Identities=29%  Similarity=0.718  Sum_probs=25.0

Q ss_pred             CcccCC--ccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCD--VCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~--~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +||.|.  -|.+.|.+...|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            589995  4999999999999999999875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00054  Score=34.82  Aligned_cols=26  Identities=35%  Similarity=0.673  Sum_probs=20.7

Q ss_pred             CCeecCcCCcccCCHHHHHHHHHhcc
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHERIHT   85 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (434)
                      +||+|..|...-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57888888888888888888888775

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.83  E-value=0.00038  Score=34.32  Aligned_cols=24  Identities=42%  Similarity=0.931  Sum_probs=19.2

Q ss_pred             eeccccCcccCChhHHHhhhcccc
Q psy8251         118 YNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       118 ~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      |+|..|.++|-.++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678888888888888888888764

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.74  E-value=0.00043  Score=35.64  Aligned_cols=29  Identities=24%  Similarity=0.611  Sum_probs=26.7

Q ss_pred             CCcccCCccccccCCchhHHHHHHhhccC
Q psy8251         309 DRPYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       309 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +..|.|..|...|...-.|+.||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45799999999999999999999999975

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00046  Score=39.39  Aligned_cols=27  Identities=30%  Similarity=0.717  Sum_probs=23.3

Q ss_pred             CCCCceeccccCcccCChhHHHhhhcc
Q psy8251         113 TGQRKYNCTVCGKAFSRKSFVTTHMRV  139 (434)
Q Consensus       113 ~~~~~~~C~~C~k~F~~~~~L~~H~~~  139 (434)
                      +|-+||.|.+|++.|-.+.++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            467899999999999999999999643

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.59  E-value=0.0014  Score=33.74  Aligned_cols=28  Identities=25%  Similarity=0.647  Sum_probs=20.5

Q ss_pred             CCeecCcCCcccCCHHHHHHHHHhccCC
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHERIHTGQ   87 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   87 (434)
                      ..|.|..|...|...-.|+.||..|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4577777777777777777777777764

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.56  E-value=0.0011  Score=34.08  Aligned_cols=25  Identities=36%  Similarity=0.755  Sum_probs=17.7

Q ss_pred             CCeecCc--CCcccCCHHHHHHHHHhc
Q psy8251          60 SPWCCRF--CNKRMMTKLSLGIHERIH   84 (434)
Q Consensus        60 ~~~~C~~--C~~~f~~~~~L~~H~~~h   84 (434)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3677766  777777777777777665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.00063  Score=38.33  Aligned_cols=29  Identities=34%  Similarity=0.795  Sum_probs=26.1

Q ss_pred             CCCcccC--CccccccCCchhHHHHHHhhcc
Q psy8251         308 CDRPYDC--DVCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       308 ~~k~f~C--~~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      .+|||.|  +-|+.+|.+...|..|...|.-
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~m   33 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhee
Confidence            4799999  5699999999999999999964

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.33  E-value=0.0019  Score=36.68  Aligned_cols=28  Identities=25%  Similarity=0.681  Sum_probs=19.4

Q ss_pred             CCeecCcCCcccCCHHHHHHHHHhccCC
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHERIHTGQ   87 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   87 (434)
                      +.|.|.+|++.|.+...|--|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4577777777777777777777776544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.002  Score=33.21  Aligned_cols=23  Identities=35%  Similarity=0.677  Sum_probs=16.1

Q ss_pred             CeecCcCCcccCCHHHHHHHHHh
Q psy8251          61 PWCCRFCNKRMMTKLSLGIHERI   83 (434)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~   83 (434)
                      ||.|..|+..|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56677777777777777777664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.0016  Score=33.68  Aligned_cols=26  Identities=23%  Similarity=0.558  Sum_probs=15.7

Q ss_pred             CCCCCccchhhhcCCHHHHHHHHHhhc
Q psy8251          26 LSFDNCHICKETFYKHSELVRHLEREH   52 (434)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~L~~H~~~~H   52 (434)
                      +||. |+.|.....+.++|+.|++..|
T Consensus         1 kpy~-cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQ-CQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCC-CSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCcc-ccccccccccchhhhhhhhccc
Confidence            3555 6666666666666666666555

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.0013  Score=32.37  Aligned_cols=22  Identities=32%  Similarity=0.762  Sum_probs=20.3

Q ss_pred             ceeccccCcccCChhHHHhhhc
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMR  138 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~  138 (434)
                      ||+|..|...|-++..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999974

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0013  Score=33.96  Aligned_cols=28  Identities=25%  Similarity=0.578  Sum_probs=22.7

Q ss_pred             CceeccccCcccCChhHHHhhhccccCC
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRVHTGK  143 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~  143 (434)
                      +||+|+.|...-.+.++|..|++.-++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4788999988888888998888766553

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0015  Score=33.22  Aligned_cols=26  Identities=23%  Similarity=0.507  Sum_probs=23.7

Q ss_pred             cccCCccccccCCchhHHHHHHhhcc
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKKHDE  336 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~H~~  336 (434)
                      |-+|+.|.++.+++..|+.|.|+|..
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999999963

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.99  E-value=0.0012  Score=32.51  Aligned_cols=22  Identities=36%  Similarity=0.869  Sum_probs=20.8

Q ss_pred             cccCCccccccCCchhHHHHHH
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRK  332 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r  332 (434)
                      ||+|..|...|.++..|+.||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999974

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.86  E-value=0.0024  Score=33.78  Aligned_cols=26  Identities=35%  Similarity=0.949  Sum_probs=21.9

Q ss_pred             ceeccccCcccCChhHHHhhhcc-ccC
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRV-HTG  142 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~-h~~  142 (434)
                      ||.|.+|++.|..+..|.+|... |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            78999999999999999999764 443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.80  E-value=0.0021  Score=32.48  Aligned_cols=23  Identities=22%  Similarity=0.771  Sum_probs=20.9

Q ss_pred             cccCCccccccCCchhHHHHHHh
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      ||+|..||+.|..+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999643

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.48  E-value=0.0037  Score=35.13  Aligned_cols=28  Identities=21%  Similarity=0.651  Sum_probs=22.5

Q ss_pred             CCCceec--cccCcccCChhHHHhhhcccc
Q psy8251         114 GQRKYNC--TVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       114 ~~~~~~C--~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      .++||.|  +-|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4788888  568888888888888887764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.0036  Score=37.00  Aligned_cols=26  Identities=31%  Similarity=0.747  Sum_probs=23.8

Q ss_pred             CcccCCccccccCCchhHHHHHHhhc
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      ..|.|.+|||.|+....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            46899999999999999999998884

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.37  E-value=0.0043  Score=31.95  Aligned_cols=27  Identities=33%  Similarity=0.642  Sum_probs=17.0

Q ss_pred             CeecCc--CCcccCCHHHHHHHHHhccCC
Q psy8251          61 PWCCRF--CNKRMMTKLSLGIHERIHTGQ   87 (434)
Q Consensus        61 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~   87 (434)
                      ||.|.+  |.+.|.+...|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            566655  666666666666666666653

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.0075  Score=30.62  Aligned_cols=25  Identities=28%  Similarity=0.547  Sum_probs=20.0

Q ss_pred             ceeccccCcccCChhHHHhhhcccc
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRVHT  141 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~h~  141 (434)
                      |-+|+.|..+..++..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578888888888888888888774

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.0092  Score=32.24  Aligned_cols=27  Identities=30%  Similarity=0.640  Sum_probs=24.0

Q ss_pred             cccCCccccccCCchhHHHHHHhhccC
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      .|.|..||++|+....+.+|...-.|-
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            589999999999999999998776664

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.73  E-value=0.0071  Score=29.80  Aligned_cols=23  Identities=35%  Similarity=0.625  Sum_probs=21.4

Q ss_pred             ccCCccccccCCchhHHHHHHhh
Q psy8251         312 YDCDVCGAKFTQVGDMRRHRKKH  334 (434)
Q Consensus       312 f~C~~Cgk~F~~~~~L~~H~r~H  334 (434)
                      |.|+.|-+.|+.+.++..|+++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            89999999999999999999864

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.76  E-value=0.016  Score=29.15  Aligned_cols=23  Identities=30%  Similarity=0.670  Sum_probs=19.3

Q ss_pred             ceeccccCcccCChhHHHhhhcc
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRV  139 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~  139 (434)
                      ||+|..||+.+-.+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68899999999889999888643

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.019  Score=31.48  Aligned_cols=20  Identities=35%  Similarity=0.624  Sum_probs=18.8

Q ss_pred             CcccCChhhHHHHhhhccCC
Q psy8251         177 GKAFSRKSFVTTHMRVHTGK  196 (434)
Q Consensus       177 ~~~F~~~~~L~~H~~~H~~~  196 (434)
                      ++.|..+..|..|||+|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            78899999999999999986

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.36  E-value=0.018  Score=30.09  Aligned_cols=28  Identities=29%  Similarity=0.635  Sum_probs=24.7

Q ss_pred             CcccCC--ccccccCCchhHHHHHHhhccC
Q psy8251         310 RPYDCD--VCGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       310 k~f~C~--~Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      +.|.|.  .|+.+|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            467884  5999999999999999999985

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.30  E-value=0.022  Score=30.69  Aligned_cols=26  Identities=31%  Similarity=0.782  Sum_probs=22.1

Q ss_pred             ceeccccCcccCChhHHHhhhccccC
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMRVHTG  142 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~~h~~  142 (434)
                      .|.|..|++.|..+..+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999999999876665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.67  E-value=0.049  Score=32.00  Aligned_cols=26  Identities=27%  Similarity=0.387  Sum_probs=19.9

Q ss_pred             CCeecCcCCcccCCHHHHHHHHHhcc
Q psy8251          60 SPWCCRFCNKRMMTKLSLGIHERIHT   85 (434)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (434)
                      ..|.|..|++.|.....|++|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45778888888888888888877663

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.91  E-value=0.032  Score=30.51  Aligned_cols=21  Identities=14%  Similarity=0.072  Sum_probs=18.4

Q ss_pred             cccccCCchhHHHHHHhhccC
Q psy8251         317 CGAKFTQVGDMRRHRKKHDEN  337 (434)
Q Consensus       317 Cgk~F~~~~~L~~H~r~H~~~  337 (434)
                      =|+.|.....|..|||+|+|+
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            356799999999999999985

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.17  E-value=0.12  Score=25.99  Aligned_cols=22  Identities=32%  Similarity=0.717  Sum_probs=14.8

Q ss_pred             eecCcCCcccCCHHHHHHHHHh
Q psy8251          62 WCCRFCNKRMMTKLSLGIHERI   83 (434)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~   83 (434)
                      |.|+.|+.....+++|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5677777766777777766653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.15  E-value=0.045  Score=27.58  Aligned_cols=23  Identities=22%  Similarity=0.583  Sum_probs=21.4

Q ss_pred             cccCCccccccCCchhHHHHHHh
Q psy8251         311 PYDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       311 ~f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      .|.|+.|+-.-..++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            58999999999999999999985

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.91  E-value=0.11  Score=25.44  Aligned_cols=22  Identities=32%  Similarity=0.655  Sum_probs=15.6

Q ss_pred             eecCcCCcccCCHHHHHHHHHh
Q psy8251          62 WCCRFCNKRMMTKLSLGIHERI   83 (434)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~   83 (434)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5677777777777777777654

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.57  E-value=0.05  Score=27.16  Aligned_cols=24  Identities=29%  Similarity=0.776  Sum_probs=20.8

Q ss_pred             ccC--CccccccCCchhHHHHHHhhc
Q psy8251         312 YDC--DVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       312 f~C--~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      |.|  +-||+.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            566  459999999999999999886

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.93  E-value=0.084  Score=28.07  Aligned_cols=23  Identities=22%  Similarity=0.583  Sum_probs=20.7

Q ss_pred             CcccCCccccccCCchhHHHHHH
Q psy8251         310 RPYDCDVCGAKFTQVGDMRRHRK  332 (434)
Q Consensus       310 k~f~C~~Cgk~F~~~~~L~~H~r  332 (434)
                      ..|.|.-||-.|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45999999999999999999964

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.83  E-value=0.083  Score=26.78  Aligned_cols=20  Identities=30%  Similarity=0.554  Sum_probs=18.2

Q ss_pred             ccccccCCchhHHHHHHhhc
Q psy8251         316 VCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       316 ~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      -|++.|...+.+++|+-+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            49999999999999999883

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.34  E-value=0.15  Score=27.09  Aligned_cols=22  Identities=36%  Similarity=0.720  Sum_probs=19.1

Q ss_pred             ceeccccCcccCChhHHHhhhc
Q psy8251         117 KYNCTVCGKAFSRKSFVTTHMR  138 (434)
Q Consensus       117 ~~~C~~C~k~F~~~~~L~~H~~  138 (434)
                      .|.|.-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4889999999999999988875

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.28  E-value=0.29  Score=25.44  Aligned_cols=27  Identities=30%  Similarity=0.607  Sum_probs=16.2

Q ss_pred             CeecCc--CCcccCCHHHHHHHHHhccCC
Q psy8251          61 PWCCRF--CNKRMMTKLSLGIHERIHTGQ   87 (434)
Q Consensus        61 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~   87 (434)
                      .|.|..  |+..|.....|..|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            455544  666666666666666666553

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.27  E-value=0.16  Score=25.68  Aligned_cols=20  Identities=30%  Similarity=0.385  Sum_probs=16.0

Q ss_pred             ccccccCCHHHHHHHHHHcC
Q psy8251           4 RGFRGFRQVINLLKHRREHG   23 (434)
Q Consensus         4 ~C~~~F~~~~~l~~H~~~h~   23 (434)
                      -|++.|.+.++++.|+-+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            48888888888888887773

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.93  E-value=0.37  Score=24.54  Aligned_cols=21  Identities=19%  Similarity=0.553  Sum_probs=10.7

Q ss_pred             eecCcCCcccCCHHHHHHHHH
Q psy8251          62 WCCRFCNKRMMTKLSLGIHER   82 (434)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~   82 (434)
                      |.|..||+...+...++.|+.
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            445555555555555555543

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.85  E-value=0.097  Score=29.65  Aligned_cols=15  Identities=40%  Similarity=0.718  Sum_probs=10.6

Q ss_pred             CCCCCcccCCccccc
Q psy8251         306 HHCDRPYDCDVCGAK  320 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~  320 (434)
                      +.++.|-.|++||..
T Consensus        15 ~~g~~P~~CPvCg~~   29 (37)
T d1nnqa2          15 AVDEAPEYCPVCGAP   29 (37)
T ss_dssp             EESCCCSBCTTTCCB
T ss_pred             ecCCCCCcCCCCCCc
Confidence            555677888888753

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.31  E-value=0.06  Score=35.16  Aligned_cols=26  Identities=15%  Similarity=0.354  Sum_probs=23.0

Q ss_pred             CCCcccCCccccccCCchhHHHHHHh
Q psy8251         308 CDRPYDCDVCGAKFTQVGDMRRHRKK  333 (434)
Q Consensus       308 ~~k~f~C~~Cgk~F~~~~~L~~H~r~  333 (434)
                      |...|-|-.|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            34679999999999999999999864

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.00  E-value=0.26  Score=28.69  Aligned_cols=32  Identities=9%  Similarity=0.287  Sum_probs=25.3

Q ss_pred             CCCceeccccCcccCChhHHHhhhccccCCcc
Q psy8251         114 GQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT  145 (434)
Q Consensus       114 ~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  145 (434)
                      .+.|-.|++|+...++..+|++|+..-+-.+|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            35678899999999999999999876655444

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.16  E-value=0.32  Score=28.35  Aligned_cols=29  Identities=28%  Similarity=0.607  Sum_probs=25.2

Q ss_pred             CCCCcccCCccccccCCchhHHHHHHhhc
Q psy8251         307 HCDRPYDCDVCGAKFTQVGDMRRHRKKHD  335 (434)
Q Consensus       307 ~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~  335 (434)
                      ..+.|-.|++|+....+..+|++|+..-+
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            45689999999999999999999987644

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.15  E-value=0.23  Score=26.71  Aligned_cols=27  Identities=26%  Similarity=0.678  Sum_probs=23.1

Q ss_pred             CCCcccCCccccccCCchhHHHHHHhh
Q psy8251         308 CDRPYDCDVCGAKFTQVGDMRRHRKKH  334 (434)
Q Consensus       308 ~~k~f~C~~Cgk~F~~~~~L~~H~r~H  334 (434)
                      ++..|.|.+|.+.|+..+++-+|--+-
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhh
Confidence            456799999999999999999996543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.31  E-value=0.23  Score=32.28  Aligned_cols=24  Identities=25%  Similarity=0.513  Sum_probs=21.2

Q ss_pred             CceeccccCcccCChhHHHhhhcc
Q psy8251         116 RKYNCTVCGKAFSRKSFVTTHMRV  139 (434)
Q Consensus       116 ~~~~C~~C~k~F~~~~~L~~H~~~  139 (434)
                      ..|.|..|++.|.+...|..|++.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            348999999999999999999874

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=82.69  E-value=0.19  Score=28.14  Aligned_cols=15  Identities=20%  Similarity=0.445  Sum_probs=10.7

Q ss_pred             CCCCCcccCCccccc
Q psy8251         306 HHCDRPYDCDVCGAK  320 (434)
Q Consensus       306 H~~~k~f~C~~Cgk~  320 (434)
                      |.++.|=+|++||..
T Consensus        15 ~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2          15 HKGEDFEKCPICFRP   29 (36)
T ss_dssp             EESSCCSBCTTTCCB
T ss_pred             eeCCCCCcCCCCCCc
Confidence            556677788888853

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.55  E-value=0.82  Score=23.21  Aligned_cols=19  Identities=21%  Similarity=0.539  Sum_probs=9.8

Q ss_pred             ccchhhhcCCHHHHHHHHH
Q psy8251          31 CHICKETFYKHSELVRHLE   49 (434)
Q Consensus        31 C~~C~~~f~~~~~L~~H~~   49 (434)
                      |..||+...+...++.|+-
T Consensus         5 c~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           5 CHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CSSSCCCCSSHHHHHHHHH
T ss_pred             chhHHHHHhhccCceEEEe
Confidence            4555555555555555544

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.42  E-value=0.55  Score=23.28  Aligned_cols=19  Identities=32%  Similarity=0.524  Sum_probs=11.4

Q ss_pred             CCcccCCHHHHHHHHHhcc
Q psy8251          67 CNKRMMTKLSLGIHERIHT   85 (434)
Q Consensus        67 C~~~f~~~~~L~~H~~~h~   85 (434)
                      |++.|..-..|+.|+-+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            6666666666666655543